BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036303
(605 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FLJ4|PP440_ARATH Pentatricopeptide repeat-containing protein At5g61400
OS=Arabidopsis thaliana GN=At5g61400 PE=2 SV=1
Length = 654
Score = 595 bits (1533), Expect = e-169, Method: Compositional matrix adjust.
Identities = 297/562 (52%), Positives = 383/562 (68%), Gaps = 4/562 (0%)
Query: 1 IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLII 60
+ +VL A Y ARCLIK + E L + +P ++ + +FNAL ++ PKF+ VFS LI+
Sbjct: 81 VIHVLTGAHKYTLARCLIKSLIERLKRHSEPSNMSHRLFNALEDIQSPKFSIGVFSLLIM 140
Query: 61 AFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVV 120
F EMG EEALWV R+++ P +AC ++LNGL+++ +FDSVW Y+ M+ GLV DV
Sbjct: 141 EFLEMGLFEEALWVSREMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVH 200
Query: 121 TYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM 180
Y VL CC QG K L DEM GI+P V IYTI I LC +NKM EAE MF M
Sbjct: 201 IYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELM 260
Query: 181 RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGEL 240
++ GV+PNLYTY+A++DGYCK +V +A Y E+L L PNVV FG L+DG CK EL
Sbjct: 261 KKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKAREL 320
Query: 241 RAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNIL 300
A + FVHM KFGV PN++VYNCLI GHCK+GN+ EA+ L SEME +SPDVFTY IL
Sbjct: 321 VTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTIL 380
Query: 301 IKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGV 360
I GLC Q+ A L QKM E I + TYNSLI GYCKE +ME+AL +CS+MT GV
Sbjct: 381 INGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGV 440
Query: 361 EPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLR 420
EPN++TFS+LIDG C +I AAMGLY EM IK +VPDVV +TALID K+ NMKE LR
Sbjct: 441 EPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALR 500
Query: 421 LYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAII 480
LY +MLEA I P+ T + L+ G +K GR+S A++F+ E + NHV + +I
Sbjct: 501 LYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCW----NHVGFTCLI 556
Query: 481 QALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIV 540
+ LC +G IL+AS+ FSDMRS + PD C+Y +ML+G L+ KR+ D MML DMIK GI+
Sbjct: 557 EGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGIL 616
Query: 541 PDAVINQVMVRGYQENGDLKSA 562
P+ ++NQ++ R YQ NG +KSA
Sbjct: 617 PNLLVNQLLARFYQANGYVKSA 638
Score = 170 bits (431), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 101/335 (30%), Positives = 169/335 (50%), Gaps = 4/335 (1%)
Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
+++GL + + + M G+ P++ +Y L K G + L EM
Sbjct: 170 ILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLG 229
Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
I P+V+ Y I I LC ++E AE + + M K G+L N+ TY+++IDGYCK G++ +A
Sbjct: 230 IKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAY 289
Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
+ ++ + PNVV F +L+DG CKA + A L+ MV + P++ V+ LI G
Sbjct: 290 GLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGH 349
Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
K GNM E + L EM ++P VFT + LI+GL +++ A F K
Sbjct: 350 CKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLF----QKMKNERI 405
Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
P+ Y ++I C + + +A L S+M + + P+ T++T++ G + + M
Sbjct: 406 FPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMG 465
Query: 530 LLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
L +M GIVPD V ++ + + ++K A R
Sbjct: 466 LYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALR 500
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 317 bits (813), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 187/574 (32%), Positives = 310/574 (54%), Gaps = 16/574 (2%)
Query: 1 IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLII 60
+ ++L A++Y +A ++K++ + K + V + ++ +P F VF L
Sbjct: 148 VAHILFCARMYYDANSVLKEMVLS-----KADCDVFDVLWSTRNVCVPGF--GVFDALFS 200
Query: 61 AFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVA 117
++G +EEA+ + K++ V P ++CN LL+ K GK D V F+++M+ G
Sbjct: 201 VLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARP 260
Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF 177
V TY ++IDC C +GDV A LF+EM +G+ P V Y +I G ++ + F
Sbjct: 261 TVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFF 320
Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
M++ P++ TYNAL++ +CK + LEFY EM + L+PNVV++ L+D CK
Sbjct: 321 EEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKE 380
Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
G ++ A F+V M + G+ PN + Y LID +CK GNL +A L +EM + + +V TY
Sbjct: 381 GMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTY 440
Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
LI GLC +++ AE L KM G++ N+ +YN+LI G+ K +M++AL + +++
Sbjct: 441 TALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKG 500
Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
+G++P+++ + + I G C I+AA + EM + + +++T L+D K GN E
Sbjct: 501 RGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTE 560
Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYA 477
L L EM E I +V T LI GL KN +S A+++F ++ D G N ++
Sbjct: 561 GLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISN--DFGL-QANAAIFT 617
Query: 478 AIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKM 537
A+I LC D Q+ A+ LF M L PD YT+++ G + +L+ + L M ++
Sbjct: 618 AMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEI 677
Query: 538 GIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
G+ D + +V G L+ A FL+E
Sbjct: 678 GMKLDLLAYTSLVWGLSHCNQLQKA---RSFLEE 708
Score = 226 bits (577), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 129/405 (31%), Positives = 222/405 (54%), Gaps = 4/405 (0%)
Query: 54 VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
++ LI F + G + L YR+++ + P + + + L++ K+G +FY +M
Sbjct: 334 TYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDM 393
Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
GLV + TY LID C G++ A L +EM+ G+E VV YT LI GLC+ +M
Sbjct: 394 RRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERM 453
Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
EAE +F M GV+PNL +YNAL+ G+ K +++RALE +E+ ++P+++ +G
Sbjct: 454 KEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTF 513
Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
+ GLC + ++ AA M + G+ N +Y L+D + K+GN E + L EM++ +I
Sbjct: 514 IWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDI 573
Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE-GILANVVTYNSLIDGYCKEGDMEKAL 349
V T+ +LI GLC + A ++ + G+ AN + ++IDG CK+ +E A
Sbjct: 574 EVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAAT 633
Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
++ QM +KG+ P+ ++SL+DG K GN+ A+ L +M + D++ +T+L+ GL
Sbjct: 634 TLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGL 693
Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
S +++ +EM+ I P S++ ++ G I A+
Sbjct: 694 SHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAV 738
Score = 136 bits (342), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 160/311 (51%), Gaps = 4/311 (1%)
Query: 49 KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWE 105
++N ++ LI + ++EA ++ K++ V+P + + NAL++G +K D E
Sbjct: 434 EWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALE 493
Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
E+ G+ D++ YG I C + A + +EM + GI+ +IYT L+
Sbjct: 494 LLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYF 553
Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH-NLQPNV 224
E + M+E + + T+ L+DG CK V++A+++++ + + LQ N
Sbjct: 554 KSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANA 613
Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
F ++DGLCK ++ AA F M + G+ P+ Y L+DG+ K GN+ EA++L +
Sbjct: 614 AIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDK 673
Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
M + + D+ Y L+ GL QL+ A L++M EGI + V S++ + + G
Sbjct: 674 MAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGC 733
Query: 345 MEKALSVCSQM 355
+++A+ + S +
Sbjct: 734 IDEAVELQSYL 744
Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 124/256 (48%), Gaps = 8/256 (3%)
Query: 42 LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACN----ALLNGLI 95
LN L+ P + + T I + IE A V +++ I+A + L++
Sbjct: 495 LNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKEC-GIKANSLIYTTLMDAYF 553
Query: 96 KKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMI-DKGIEPTV 154
K G +EM + VVT+ VLID C V KA++ F+ + D G++
Sbjct: 554 KSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANA 613
Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
I+T +I GLC +N++ A ++F M + G+VP+ Y +LMDG K +V AL +
Sbjct: 614 AIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDK 673
Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
M ++ +++ + L+ GL +L+ A +F M G+ P+ + ++ H + G
Sbjct: 674 MAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGC 733
Query: 275 LFEAMSLCSEMEKFEI 290
+ EA+ L S + K ++
Sbjct: 734 IDEAVELQSYLMKHQL 749
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 301 bits (772), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 184/548 (33%), Positives = 282/548 (51%), Gaps = 11/548 (2%)
Query: 55 FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
++TL+ + + G ++E VY ++ +V P I N ++NG K G + ++ ++V
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
GL D TY LI C + D+ A +F+EM KG V YT LIHGLC ++
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
EA +F M++ P + TY L+ C + AL EM ++PN+ T+ VL+
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
D LC + A M + G+ PN+ YN LI+G+CK G + +A+ + ME ++S
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
P+ TYN LIKG C + A G+L KM + +L +VVTYNSLIDG C+ G+ + A +
Sbjct: 426 PNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
S M ++G+ P+ T++S+ID CK+ ++ A L+ + K + P+VV++TALIDG K
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCK 544
Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
G + E + ++ML P+ T ++LIHGL +G++ A EK K P
Sbjct: 545 AGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEA-TLLEEKMVKIG---LQP 600
Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
+I L DG A F M S +PD TYTT ++ R R+LD ++
Sbjct: 601 TVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMM 660
Query: 532 ADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGHL 591
A M + G+ PD +++GY + G AF + LK R E HT S + HL
Sbjct: 661 AKMRENGVSPDLFTYSSLIKGYGDLGQTNFAF---DVLKRMRDTGCEPSQHTFLSLIKHL 717
Query: 592 KPTVYKEQ 599
Y +Q
Sbjct: 718 LEMKYGKQ 725
Score = 275 bits (704), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 177/585 (30%), Positives = 292/585 (49%), Gaps = 62/585 (10%)
Query: 51 NPSVFSTLIIAFSEMGHIEEA-LWVYRKIE--VLPAIQACNALLNGLIKKGKFDSVWEFY 107
N ++ ++ + ++G++EEA +V + +E + P +L+ G ++ DS ++ +
Sbjct: 217 NIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVF 276
Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
EM L G + V Y LI C + +A++LF +M D PTV YT+LI LC
Sbjct: 277 NEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGS 336
Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
+ EA ++ + M E G+ PN++TY L+D C +A E +ML L PNV+T+
Sbjct: 337 ERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITY 396
Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
L++G CK G + A + M + PN YN LI G+CK+ N+ +AM + ++M +
Sbjct: 397 NALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLE 455
Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
++ PDV TYN LI G C G + A LL M G++ + TY S+ID CK +E+
Sbjct: 456 RKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEE 515
Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
A + + +KGV PNVV +++LIDG CKAG +D A + +M+ K+ +P+ + F ALI
Sbjct: 516 ACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIH 575
Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
GL DG +KE L ++M++ + P+V T + LIH L K+G +A + F +
Sbjct: 576 GLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSG--- 632
Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRG---------- 517
P+ Y IQ C +G++L A + + MR + + PD TY+++++G
Sbjct: 633 -TKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFA 691
Query: 518 LLRAKRMLD-------------------------------------------VMMLLADM 534
KRM D V+ LL M
Sbjct: 692 FDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKM 751
Query: 535 IKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESR-IGSSE 578
++ + P+A + ++ G E G+L+ A + + ++ + I SE
Sbjct: 752 VEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSE 796
Score = 261 bits (666), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 161/549 (29%), Positives = 285/549 (51%), Gaps = 29/549 (5%)
Query: 48 PKFNPSVFS--TLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLI-----KKGKF 100
P++ SV+S +L+ G++ V KI +L I++C+++ + L +K
Sbjct: 117 PRYKHSVYSYASLLTLLINNGYV----GVVFKIRLL-MIKSCDSVGDALYVLDLCRKMNK 171
Query: 101 DSVWEF-YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTI 159
D +E Y+ ++ C Y L++ G V + ++ EM++ + P + Y
Sbjct: 172 DERFELKYKLIIGC--------YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNK 223
Query: 160 LIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN 219
+++G C + EA + E G+ P+ +TY +L+ GYC+ D++ A + ++EM
Sbjct: 224 MVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKG 283
Query: 220 LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAM 279
+ N V + L+ GLC + A + FV M FP + Y LI C + EA+
Sbjct: 284 CRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEAL 343
Query: 280 SLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGY 339
+L EME+ I P++ TY +LI LC + E A LL +M ++G++ NV+TYN+LI+GY
Sbjct: 344 NLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGY 403
Query: 340 CKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDV 399
CK G +E A+ V M + + PN T++ LI G CK+ N+ AMG+ +M+ + ++PDV
Sbjct: 404 CKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDV 462
Query: 400 VVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE 459
V + +LIDG + GN RL M + + P +T +S+I L K+ R+ A + F
Sbjct: 463 VTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLF-- 520
Query: 460 KTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLL 519
D + +PN V+Y A+I C G++ +A + M S N P++ T+ ++ GL
Sbjct: 521 --DSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLC 578
Query: 520 RAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSET 579
++ + +L M+K+G+ P + +++ ++GD A+ S F + G ++
Sbjct: 579 ADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAY--SRFQQMLSSG-TKP 635
Query: 580 EGHTTRSFL 588
+ HT +F+
Sbjct: 636 DAHTYTTFI 644
Score = 223 bits (567), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 164/584 (28%), Positives = 266/584 (45%), Gaps = 55/584 (9%)
Query: 28 SRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAI 84
RK + VFN + L+ + N ++ LI I+EA+ ++ K+ E P +
Sbjct: 265 QRKDLDSAFKVFNEM-PLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTV 323
Query: 85 QACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDE 144
+ L+ L + +EM G+ ++ TY VLID C Q KA L +
Sbjct: 324 RTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQ 383
Query: 145 MIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVAD 204
M++KG+ P V+ Y LI+G C + +A + M + PN TYN L+ GYCK ++
Sbjct: 384 MLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SN 442
Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDG------------------------------- 233
V++A+ ++ML + P+VVT+ L+DG
Sbjct: 443 VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTS 502
Query: 234 ----LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
LCK + A + F + + GV PN+ +Y LIDG+CKAG + EA + +M
Sbjct: 503 MIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKN 562
Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
P+ T+N LI GLC G+L+ A L +KM K G+ V T LI K+GD + A
Sbjct: 563 CLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAY 622
Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
S QM G +P+ T+++ I C+ G + A + +M + PD+ +++LI G
Sbjct: 623 SRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGY 682
Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF--KNGR----------ISNALNF- 456
G + K M + PS T SLI L K G+ +SN + F
Sbjct: 683 GDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFD 742
Query: 457 -FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM-RSDNLRPDNCTYTTM 514
+E +K +PN Y +I +C G + A K+F M R++ + P + +
Sbjct: 743 TVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNAL 802
Query: 515 LRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
L + K+ + ++ DMI +G +P +V++ G + G+
Sbjct: 803 LSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGE 846
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 145/497 (29%), Positives = 232/497 (46%), Gaps = 29/497 (5%)
Query: 45 LEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGK 99
+E K +P+ ++ LI + + ++ +A+ V K+ +VLP + N+L++G + G
Sbjct: 419 MESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGN 477
Query: 100 FDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTI 159
FDS + M GLV D TY +ID C V +A +LFD + KG+ P VV+YT
Sbjct: 478 FDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTA 537
Query: 160 LIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN 219
LI G C K+ EA M M +PN T+NAL+ G C + A +M+
Sbjct: 538 LIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIG 597
Query: 220 LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAM 279
LQP V T +L+ L K G+ A + F M G P+ Y I +C+ G L +A
Sbjct: 598 LQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAE 657
Query: 280 SLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLID-- 337
+ ++M + +SPD+FTY+ LIKG +GQ A +L++M G + T+ SLI
Sbjct: 658 DMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHL 717
Query: 338 ---GYCKEGDMEKALSVCS-------------QMTEKGVEPNVVTFSSLIDGQCKAGNID 381
Y K+ E L S +M E V PN ++ LI G C+ GN+
Sbjct: 718 LEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLR 777
Query: 382 AAMGLYTEMVI-KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
A ++ M + + P +VF AL+ K E ++ +M+ P + + L
Sbjct: 778 VAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVL 837
Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
I GL+K G + F + GY + + + II + G + +LF+ M
Sbjct: 838 ICGLYKKGEKERGTSVF---QNLLQCGYYE-DELAWKIIIDGVGKQGLVEAFYELFNVME 893
Query: 501 SDNLRPDNCTYTTMLRG 517
+ + + TY+ ++ G
Sbjct: 894 KNGCKFSSQTYSLLIEG 910
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 123/446 (27%), Positives = 199/446 (44%), Gaps = 39/446 (8%)
Query: 13 NARCLIKD------VTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSV--FSTLIIAFSE 64
N R L+ D + ++L KS++ C + +SLE NP+V ++ LI + +
Sbjct: 489 NDRGLVPDQWTYTSMIDSLCKSKRVEEAC----DLFDSLEQKGVNPNVVMYTALIDGYCK 544
Query: 65 MGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVT 121
G ++EA + K+ LP NAL++GL GK E+MV GL V T
Sbjct: 545 AGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVST 604
Query: 122 YGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMR 181
+LI GD A + F +M+ G +P YT I C E ++++AE M MR
Sbjct: 605 DTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMR 664
Query: 182 ECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELR 241
E GV P+L+TY++L+ GY + N A + M +P+ TF L+ L ++ +
Sbjct: 665 ENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGK 724
Query: 242 AAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFE---AMSLCSEMEKFEISPDVFTYN 298
G+ P + C N+ E + L +M + ++P+ +Y
Sbjct: 725 QKGSE----------PEL----------CAMSNMMEFDTVVELLEKMVEHSVTPNAKSYE 764
Query: 299 ILIKGLCGVGQLEGAEGLLQKMYK-EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
LI G+C VG L AE + M + EGI + + +N+L+ CK +A V M
Sbjct: 765 KLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMIC 824
Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
G P + + LI G K G + ++ ++ D + + +IDG+ K G ++
Sbjct: 825 VGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEA 884
Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHG 443
L+ M + S T S LI G
Sbjct: 885 FYELFNVMEKNGCKFSSQTYSLLIEG 910
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 296 bits (757), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 191/611 (31%), Positives = 301/611 (49%), Gaps = 63/611 (10%)
Query: 2 FYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALN-SLEIPKFNPSVFSTLII 60
++L KLYK A+ L +DV L VF +L + ++ SVF ++
Sbjct: 87 LHILTKFKLYKTAQILAEDVAAKTLDDE----YASLVFKSLQETYDLCYSTSSVFDLVVK 142
Query: 61 AFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWE-FYEEMVLCGLV 116
++S + I++AL + + +P + + NA+L+ I+ + S E ++EM+ +
Sbjct: 143 SYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVS 202
Query: 117 ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESM 176
+V TY +LI C G++ AL LFD+M KG P VV Y LI G C K+ + +
Sbjct: 203 PNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKL 262
Query: 177 FRSMRECGVVPNL-----------------------------------YTYNALMDGYCK 201
RSM G+ PNL TYN L+ GYCK
Sbjct: 263 LRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCK 322
Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
+ ++AL + EML H L P+V+T+ L+ +CK G + A F M G+ PN
Sbjct: 323 EGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERT 382
Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
Y L+DG + G + EA + EM SP V TYN LI G C G++E A +L+ M
Sbjct: 383 YTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMK 442
Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
++G+ +VV+Y++++ G+C+ D+++AL V +M EKG++P+ +T+SSLI G C+
Sbjct: 443 EKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTK 502
Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
A LY EM+ L PD +TALI+ +G++++ L+L+ EM+E + P V T S LI
Sbjct: 503 EACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLI 562
Query: 442 HGLFKNGRISNA----LNFFLEKTDKTDGGYCSPNHVL-----------YAAIIQALCYD 486
+GL K R A L F E++ +D Y H L ++I+ C
Sbjct: 563 NGLNKQSRTREAKRLLLKLFYEESVPSDVTY----HTLIENCSNIEFKSVVSLIKGFCMK 618
Query: 487 GQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVIN 546
G + +A ++F M N +PD Y M+ G RA + L +M+K G + V
Sbjct: 619 GMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTV 678
Query: 547 QVMVRGYQENG 557
+V+ + G
Sbjct: 679 IALVKALHKEG 689
Score = 240 bits (613), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 121/382 (31%), Positives = 213/382 (55%), Gaps = 5/382 (1%)
Query: 184 GVVPNLYTYNALMDGYCKVA-DVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRA 242
G +P + +YNA++D + +++ A + EML + PNV T+ +L+ G C G +
Sbjct: 164 GFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDV 223
Query: 243 AGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIK 302
A F M G PN+ YN LIDG+CK + + L M + P++ +YN++I
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 283
Query: 303 GLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEP 362
GLC G+++ +L +M + G + VTYN+LI GYCKEG+ +AL + ++M G+ P
Sbjct: 284 GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTP 343
Query: 363 NVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLY 422
+V+T++SLI CKAGN++ AM +M ++ L P+ +T L+DG S+ G M E R+
Sbjct: 344 SVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL 403
Query: 423 KEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQA 482
+EM + +PSV T ++LI+G G++ +A+ + +K SP+ V Y+ ++
Sbjct: 404 REMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKG----LSPDVVSYSTVLSG 459
Query: 483 LCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
C + +A ++ +M ++PD TY+++++G +R + L +M+++G+ PD
Sbjct: 460 FCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPD 519
Query: 543 AVINQVMVRGYQENGDLKSAFR 564
++ Y GDL+ A +
Sbjct: 520 EFTYTALINAYCMEGDLEKALQ 541
Score = 216 bits (550), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 136/458 (29%), Positives = 224/458 (48%), Gaps = 54/458 (11%)
Query: 51 NPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFY 107
N ++TLI + ++ I++ + R + + P + + N ++NGL ++G+ V
Sbjct: 239 NVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVL 298
Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
EM G D VTY LI C +G+ +AL + EM+ G+ P+V+ YT LIH +C
Sbjct: 299 TEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKA 358
Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
M A MR G+ PN TY L+DG+ + +N A EM + P+VVT+
Sbjct: 359 GNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTY 418
Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
L++G C G++ A M + G+ P++ Y+ ++ G C++ ++ EA+ + EM +
Sbjct: 419 NALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVE 478
Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
I PD TY+ LI+G C + + A L ++M + G+ + TY +LI+ YC EGD+EK
Sbjct: 479 KGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEK 538
Query: 348 ALSVCSQMTEKGVEPNVVTFS--------------------------------------- 368
AL + ++M EKGV P+VVT+S
Sbjct: 539 ALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIE 598
Query: 369 -----------SLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
SLI G C G + A ++ M+ K+ PD + +I G + G++++
Sbjct: 599 NCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRK 658
Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALN 455
LYKEM+++ TV +L+ L K G++ N LN
Sbjct: 659 AYTLYKEMVKSGFLLHTVTVIALVKALHKEGKV-NELN 695
Score = 211 bits (536), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 117/385 (30%), Positives = 207/385 (53%), Gaps = 7/385 (1%)
Query: 192 YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGE-LRAAGNFFVHM 250
++ ++ Y +++ +++AL H H P V+++ ++D + + A N F M
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 251 AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQL 310
+ V PN+F YN LI G C AGN+ A++L +ME P+V TYN LI G C + ++
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
+ LL+ M +G+ N+++YN +I+G C+EG M++ V ++M +G + VT+++L
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 316
Query: 371 IDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI 430
I G CK GN A+ ++ EM+ L P V+ +T+LI + K GNM + +M +
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL 376
Query: 431 TPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQIL 490
P+ T ++L+ G + G ++ A E D G+ SP+ V Y A+I C G++
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLREMND---NGF-SPSVVTYNALINGHCVTGKME 432
Query: 491 KASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
A + DM+ L PD +Y+T+L G R+ + + + + +M++ GI PD + ++
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 492
Query: 551 RGYQENGDLKSAFRCSEFLKESRIG 575
+G+ E K A C + + R+G
Sbjct: 493 QGFCEQRRTKEA--CDLYEEMLRVG 515
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 170/369 (46%), Gaps = 53/369 (14%)
Query: 51 NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
N ++TL+ FS+ G++ EA V R++ P++ NAL+NG GK +
Sbjct: 379 NERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVL 438
Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
E+M GL DVV+Y ++ C DV +AL + EM++KGI+P + Y+ LI G C +
Sbjct: 439 EDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQ 498
Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
+ EA ++ M G+ P+ +TY AL++ YC D+ +AL+ ++EM+ + P+VVT+
Sbjct: 499 RRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTY 558
Query: 228 GVLMDGL--------------------------------------------------CKV 237
VL++GL C
Sbjct: 559 SVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMK 618
Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
G + A F M P+ YN +I GHC+AG++ +A +L EM K T
Sbjct: 619 GMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTV 678
Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
L+K L G++ ++ + + L+ L++ +EG+M+ L V ++M +
Sbjct: 679 IALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAK 738
Query: 358 KGVEPNVVT 366
G PN ++
Sbjct: 739 DGFLPNGIS 747
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 294 bits (752), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 184/573 (32%), Positives = 290/573 (50%), Gaps = 37/573 (6%)
Query: 49 KFNPS--VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSV 103
+F+PS S+L+ + G IEEAL + +++ V P + NAL++ L K KF
Sbjct: 327 RFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEA 386
Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
++ M GL + VTY +LID C +G + AL+ EM+D G++ +V Y LI+G
Sbjct: 387 ELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLING 446
Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
C + AE M + P + TY +LM GYC +N+AL YHEM + P+
Sbjct: 447 HCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPS 506
Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
+ TF L+ GL + G +R A F MA++ V PN YN +I+G+C+ G++ +A
Sbjct: 507 IYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLK 566
Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
EM + I PD ++Y LI GLC GQ A+ + ++K N + Y L+ G+C+EG
Sbjct: 567 EMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREG 626
Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
+E+ALSVC +M ++GV+ ++V + LIDG K + GL EM + L PD V++T
Sbjct: 627 KLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYT 686
Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG--------------- 448
++ID SK G+ KE ++ M+ P+ T +++I+GL K G
Sbjct: 687 SMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPV 746
Query: 449 -RISNALNF--FLEKTDKTDGGYCS-------------PNHVLYAAIIQALCYDGQILKA 492
+ N + + FL+ K + N Y +I+ C G+I +A
Sbjct: 747 SSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEA 806
Query: 493 SKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
S+L + M D + PD TYTTM+ L R + + L M + GI PD V ++ G
Sbjct: 807 SELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHG 866
Query: 553 YQENGDLKSAFRC-SEFLKESRIGSSETEGHTT 584
G++ A +E L++ I +++T TT
Sbjct: 867 CCVAGEMGKATELRNEMLRQGLIPNNKTSRTTT 899
Score = 276 bits (705), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 166/513 (32%), Positives = 261/513 (50%), Gaps = 8/513 (1%)
Query: 55 FSTLIIAFSEMGHIEEALWVYR----KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
F LI + + + + V++ K+ +LP ++ +ALL+GL+K F E + +M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
V G+ DV Y +I C D+ +A + M G + +V Y +LI GLC + K+
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
EA + + + + P++ TY L+ G CKV + LE EML P+ L
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338
Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
++GL K G++ A N + FGV PN+FVYN LID CK EA L M K +
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGL 398
Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
P+ TY+ILI C G+L+ A L +M G+ +V YNSLI+G+CK GD+ A
Sbjct: 399 RPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEG 458
Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
++M K +EP VVT++SL+ G C G I+ A+ LY EM K + P + FT L+ GL
Sbjct: 459 FMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLF 518
Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
+ G +++ ++L+ EM E + P+ T + +I G + G +S A F E T+K
Sbjct: 519 RAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKG----IV 574
Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
P+ Y +I LC GQ +A + N + YT +L G R ++ + + +
Sbjct: 575 PDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSV 634
Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
+M++ G+ D V V++ G ++ D K F
Sbjct: 635 CQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFF 667
Score = 182 bits (462), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 133/550 (24%), Positives = 228/550 (41%), Gaps = 128/550 (23%)
Query: 146 IDKGIEPTVVIYTILIHGLCNENKMVEAES------------------MFRSMREC---- 183
+ +G + + + ILIH L N A S +F +C
Sbjct: 96 LHRGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSDVFNVLFSCYEKCKLSS 155
Query: 184 -------------------------------GVVPNLYTYNALMDGYCKVADVNRALEFY 212
++P + T +AL+ G K A+E +
Sbjct: 156 SSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELF 215
Query: 213 HEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKA 272
++M+ ++P+V + ++ LC++ +L A HM G NI YN LIDG CK
Sbjct: 216 NDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKK 275
Query: 273 GNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGV------------------------- 307
++EA+ + ++ ++ PDV TY L+ GLC V
Sbjct: 276 QKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAV 335
Query: 308 ----------GQLEGAEGLLQKMYKEGILANVVTYNSLIDG------------------- 338
G++E A L++++ G+ N+ YN+LID
Sbjct: 336 SSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGK 395
Query: 339 ----------------YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDA 382
+C+ G ++ ALS +M + G++ +V ++SLI+G CK G+I A
Sbjct: 396 IGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISA 455
Query: 383 AMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIH 442
A G EM+ K L P VV +T+L+ G G + + LRLY EM I PS++T ++L+
Sbjct: 456 AEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLS 515
Query: 443 GLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSD 502
GLF+ G I +A+ F E + PN V Y +I+ C +G + KA + +M
Sbjct: 516 GLFRAGLIRDAVKLFNEMAEWN----VKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEK 571
Query: 503 NLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
+ PD +Y ++ GL + + + + + K + + ++ G+ G L+ A
Sbjct: 572 GIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEA 631
Query: 563 FR-CSEFLKE 571
C E ++
Sbjct: 632 LSVCQEMVQR 641
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 280 bits (717), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 163/516 (31%), Positives = 276/516 (53%), Gaps = 6/516 (1%)
Query: 77 KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVM 136
K P+I + LL+ + K KFD V F E+M + G+ ++ TY ++I+C C + +
Sbjct: 58 KSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLS 117
Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
AL + +M+ G P++V L++G C+ N++ EA ++ M E G P+ T+ L+
Sbjct: 118 FALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLV 177
Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
G + + A+ M+ QP++VT+G +++GLCK GE A N M K +
Sbjct: 178 HGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIE 237
Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
++ +Y+ +ID CK ++ +A++L +EM+ I PDVFTY+ LI LC G+ A L
Sbjct: 238 ADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRL 297
Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
L M + I NVVT+NSLID + KEG + +A + +M ++ ++PN+VT++SLI+G C
Sbjct: 298 LSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCM 357
Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
+D A ++T MV K +PDVV + LI+G K + + + L+++M + + T
Sbjct: 358 HDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVT 417
Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
++LIHG F+ NA F K +DG + PN + Y ++ LC +G++ KA +F
Sbjct: 418 YTTLIHGFFQASDCDNAQMVF--KQMVSDGVH--PNIMTYNTLLDGLCKNGKLEKAMVVF 473
Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
++ + PD TY M G+ +A ++ D L + G+ PD + M+ G+ +
Sbjct: 474 EYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKK 533
Query: 557 GDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGHLK 592
G + A+ + F+K G G HL+
Sbjct: 534 GLKEEAY--TLFIKMKEDGPLPDSGTYNTLIRAHLR 567
Score = 235 bits (600), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 126/398 (31%), Positives = 209/398 (52%), Gaps = 3/398 (0%)
Query: 54 VFSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
F+TL+ + EA+ + ++ V P + A++NGL K+G+ D +M
Sbjct: 172 TFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM 231
Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
+ ADVV Y +ID C V ALNLF EM +KGI P V Y+ LI LCN +
Sbjct: 232 EKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRW 291
Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
+A + M E + PN+ T+N+L+D + K + A + + EM+ ++ PN+VT+ L
Sbjct: 292 SDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSL 351
Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
++G C L A F M P++ YN LI+G CKA + + M L +M + +
Sbjct: 352 INGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGL 411
Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
+ TY LI G + A+ + ++M +G+ N++TYN+L+DG CK G +EKA+
Sbjct: 412 VGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMV 471
Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
V + + +EP++ T++ + +G CKAG ++ L+ + +K + PDV+ + +I G
Sbjct: 472 VFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFC 531
Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
K G +E L+ +M E P T ++LI ++G
Sbjct: 532 KKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDG 569
Score = 226 bits (577), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 133/438 (30%), Positives = 226/438 (51%), Gaps = 4/438 (0%)
Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
+A++LF EM+ P++V ++ L+ + K S M GV NLYTYN ++
Sbjct: 48 EAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMI 107
Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
+ C+ + ++ AL +M+ P++VT L++G C + A M + G
Sbjct: 108 NCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 167
Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
P+ + L+ G + EA++L M PD+ TY +I GLC G+ + A L
Sbjct: 168 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 227
Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
L KM K I A+VV Y+++ID CK ++ AL++ ++M KG+ P+V T+SSLI C
Sbjct: 228 LNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCN 287
Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
G A L ++M+ + + P+VV F +LID +K+G + E +L+ EM++ I P++ T
Sbjct: 288 YGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVT 347
Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
+SLI+G + R+ A F K C P+ V Y +I C +++ +LF
Sbjct: 348 YNSLINGFCMHDRLDEAQQIFTLMVSKD----CLPDVVTYNTLINGFCKAKKVVDGMELF 403
Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
DM L + TYTT++ G +A + M+ M+ G+ P+ + ++ G +N
Sbjct: 404 RDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN 463
Query: 557 GDLKSAFRCSEFLKESRI 574
G L+ A E+L++S++
Sbjct: 464 GKLEKAMVVFEYLQKSKM 481
Score = 213 bits (543), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 119/384 (30%), Positives = 209/384 (54%), Gaps = 6/384 (1%)
Query: 39 FNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNG 93
N LN +E K V +ST+I + + H+++AL ++ +++ + P + ++L++
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 94 LIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPT 153
L G++ +M+ + +VVT+ LID +G +++A LFDEMI + I+P
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344
Query: 154 VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYH 213
+V Y LI+G C +++ EA+ +F M +P++ TYN L++G+CK V +E +
Sbjct: 345 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFR 404
Query: 214 EMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG 273
+M L N VT+ L+ G + + A F M GV PNI YN L+DG CK G
Sbjct: 405 DMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 464
Query: 274 NLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYN 333
L +AM + ++K ++ PD++TYNI+ +G+C G++E L + +G+ +V+ YN
Sbjct: 465 KLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYN 524
Query: 334 SLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIK 393
++I G+CK+G E+A ++ +M E G P+ T+++LI + G+ A+ L EM
Sbjct: 525 TMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSC 584
Query: 394 SLVPDVVVFTALIDGLSKDGNMKE 417
D + + D L DG + +
Sbjct: 585 RFAGDASTYGLVTDML-HDGRLDK 607
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 276 bits (706), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 163/564 (28%), Positives = 289/564 (51%), Gaps = 15/564 (2%)
Query: 3 YVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNAL-NSLEIPKFNPSVFSTLIIA 61
++L A++Y AR ++K+++ L S K V F AL + + NPSV+ LI
Sbjct: 80 HILVRARMYDPARHILKELS---LMSGKSSFV----FGALMTTYRLCNSNPSVYDILIRV 132
Query: 62 FSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVAD 118
+ G I+++L ++R + + P++ CNA+L ++K G+ SVW F +EM+ + D
Sbjct: 133 YLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPD 192
Query: 119 VVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFR 178
V T+ +LI+ C +G K+ L +M G PT+V Y ++H C + + A +
Sbjct: 193 VATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLD 252
Query: 179 SMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVG 238
M+ GV ++ TYN L+ C+ + + +M + PN VT+ L++G G
Sbjct: 253 HMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEG 312
Query: 239 ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYN 298
++ A M FG+ PN +N LIDGH GN EA+ + ME ++P +Y
Sbjct: 313 KVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYG 372
Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK 358
+L+ GLC + + A G +M + G+ +TY +IDG CK G +++A+ + ++M++
Sbjct: 373 VLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKD 432
Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
G++P++VT+S+LI+G CK G A + + L P+ ++++ LI + G +KE
Sbjct: 433 GIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEA 492
Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
+R+Y+ M+ T FT + L+ L K G+++ A F + +DG PN V +
Sbjct: 493 IRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFM--RCMTSDG--ILPNTVSFDC 548
Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
+I G+ LKA +F +M P TY ++L+GL + + + L + +
Sbjct: 549 LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVP 608
Query: 539 IVPDAVINQVMVRGYQENGDLKSA 562
D V+ ++ ++G+L A
Sbjct: 609 AAVDTVMYNTLLTAMCKSGNLAKA 632
Score = 245 bits (625), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 179/609 (29%), Positives = 279/609 (45%), Gaps = 92/609 (15%)
Query: 37 SVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALL 91
SV++ L + K P V F+ LI G E++ ++ +K+E P I N +L
Sbjct: 176 SVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVL 235
Query: 92 NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
+ KKG+F + E + M G+ ADV TY +LI C + K L +M + I
Sbjct: 236 HWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIH 295
Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
P V Y LI+G NE K++ A + M G+ PN T+NAL+DG+ + AL+
Sbjct: 296 PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKM 355
Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM--------------------- 250
++ M L P+ V++GVL+DGLCK E A F++ M
Sbjct: 356 FYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCK 415
Query: 251 --------------AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP---- 292
+K G+ P+I Y+ LI+G CK G A + + + +SP
Sbjct: 416 NGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGII 475
Query: 293 -------------------------------DVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
D FT+N+L+ LC G++ AE ++ M
Sbjct: 476 YSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMT 535
Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
+GIL N V+++ LI+GY G+ KA SV +MT+ G P T+ SL+ G CK G++
Sbjct: 536 SDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLR 595
Query: 382 AAMGLYTEMVIKSL--VP---DVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
A E +KSL VP D V++ L+ + K GN+ + + L+ EM++ I P +T
Sbjct: 596 EA-----EKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYT 650
Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
+SLI GL + G+ A+ F E + G PN V+Y + + GQ KA F
Sbjct: 651 YTSLISGLCRKGKTVIAILFAKEAEAR---GNVLPNKVMYTCFVDGMFKAGQ-WKAGIYF 706
Query: 497 SDMRSDNL--RPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
+ + DNL PD T M+ G R ++ LL +M P+ +++ GY
Sbjct: 707 RE-QMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYS 765
Query: 555 ENGDLKSAF 563
+ D+ ++F
Sbjct: 766 KRKDVSTSF 774
Score = 223 bits (567), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 166/596 (27%), Positives = 268/596 (44%), Gaps = 74/596 (12%)
Query: 51 NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
N F+ LI G+ +EAL ++ +E + P+ + LL+GL K +FD FY
Sbjct: 332 NHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFY 391
Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
M G+ +TY +ID C G + +A+ L +EM GI+P +V Y+ LI+G C
Sbjct: 392 MRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKV 451
Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
+ A+ + + G+ PN Y+ L+ C++ + A+ Y M+ + TF
Sbjct: 452 GRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTF 511
Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
VL+ LCK G++ A F M G+ PN ++CLI+G+ +G +A S+ EM K
Sbjct: 512 NVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTK 571
Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
P FTY L+KGLC G L AE L+ ++ + V YN+L+ CK G++ K
Sbjct: 572 VGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAK 631
Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM----------------------- 384
A+S+ +M ++ + P+ T++SLI G C+ G A+
Sbjct: 632 AVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFV 691
Query: 385 -----------GLYTEMVIKSL--VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
G+Y + +L PD+V A+IDG S+ G +++T L EM
Sbjct: 692 DGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGG 751
Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG-------------GYCSPNHV---- 474
P++ T + L+HG K +S + F L ++ +G G C N +
Sbjct: 752 PNLTTYNILLHGYSKRKDVSTS--FLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGL 809
Query: 475 ----------------LYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
+ +I C +G+I A L M S + D T M+ L
Sbjct: 810 KILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVL 869
Query: 519 LRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
R R + M+L +M K GI P++ ++ G GD+K+AF E + +I
Sbjct: 870 NRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKI 925
Score = 200 bits (509), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 141/544 (25%), Positives = 246/544 (45%), Gaps = 35/544 (6%)
Query: 54 VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
++ +I + G ++EA+ + ++ + P I +AL+NG K G+F + E +
Sbjct: 405 TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI 464
Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
GL + + Y LI CC G + +A+ +++ MI +G + +L+ LC K+
Sbjct: 465 YRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKV 524
Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
EAE R M G++PN +++ L++GY + +A + EM P T+G L
Sbjct: 525 AEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSL 584
Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
+ GLCK G LR A F + + +YN L+ CK+GNL +A+SL EM + I
Sbjct: 585 LKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSI 644
Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG-ILANVVTYNSLIDGYCKEGDMEKAL 349
PD +TY LI GLC G+ A ++ G +L N V Y +DG K G + +
Sbjct: 645 LPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGI 704
Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
QM G P++VT +++IDG + G I+ L EM ++ P++ + L+ G
Sbjct: 705 YFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGY 764
Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF---FLEKTDKTD- 465
SK ++ + LY+ ++ I P T SL+ G+ ++ + L F+ + + D
Sbjct: 765 SKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDR 824
Query: 466 -------GGYCSPNHVLYA--------------------AIIQALCYDGQILKASKLFSD 498
C+ + +A A++ L + + ++ + +
Sbjct: 825 YTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHE 884
Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
M + P++ Y ++ GL R + ++ +MI I P V MVR + G
Sbjct: 885 MSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGK 944
Query: 559 LKSA 562
A
Sbjct: 945 ADEA 948
Score = 198 bits (504), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 137/517 (26%), Positives = 237/517 (45%), Gaps = 8/517 (1%)
Query: 51 NPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQ---ACNALLNGLIKKGKFDSVWEFY 107
N ++STLI MG ++EA+ +Y + + + N L+ L K GK EF
Sbjct: 472 NGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFM 531
Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
M G++ + V++ LI+ G+ +KA ++FDEM G PT Y L+ GLC
Sbjct: 532 RCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKG 591
Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
+ EAE +S+ + YN L+ CK ++ +A+ + EM+ ++ P+ T+
Sbjct: 592 GHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTY 651
Query: 228 GVLMDGLCKVGELRAAGNFFVHM-AKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
L+ GLC+ G+ A F A+ V PN +Y C +DG KAG + +M+
Sbjct: 652 TSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMD 711
Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
+PD+ T N +I G +G++E LL +M + N+ TYN L+ GY K D+
Sbjct: 712 NLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVS 771
Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
+ + + G+ P+ +T SL+ G C++ ++ + + + + + D F LI
Sbjct: 772 TSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLI 831
Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
+G + L K M I+ T +++ L +N R + E + +
Sbjct: 832 SKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQG-- 889
Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
SP Y +I LC G I A + +M + + P N + M+R L + + +
Sbjct: 890 --ISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADE 947
Query: 527 VMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
+LL M+KM +VP ++ +NG++ A
Sbjct: 948 ATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEAL 984
Score = 183 bits (465), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 135/537 (25%), Positives = 244/537 (45%), Gaps = 44/537 (8%)
Query: 51 NPSVFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
N F LI + G +A V+ K+ P +LL GL K G +F
Sbjct: 542 NTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFL 601
Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
+ + D V Y L+ C G++ KA++LF EM+ + I P YT LI GLC +
Sbjct: 602 KSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRK 661
Query: 168 NKMV-------EAES-----------------MFRS------------MRECGVVPNLYT 191
K V EAE+ MF++ M G P++ T
Sbjct: 662 GKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVT 721
Query: 192 YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
NA++DGY ++ + + + EM + N PN+ T+ +L+ G K ++ + + +
Sbjct: 722 TNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSII 781
Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
G+ P+ + L+ G C++ L + + + D +T+N+LI C G++
Sbjct: 782 LNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEIN 841
Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
A L++ M GI + T ++++ + +++ V +M+++G+ P + LI
Sbjct: 842 WAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLI 901
Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
+G C+ G+I A + EM+ + P V +A++ L+K G E L + ML+ K+
Sbjct: 902 NGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLV 961
Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
P++ + ++L+H KNG + AL + ++ G + V Y +I LC G +
Sbjct: 962 PTIASFTTLMHLCCKNGNVIEALEL---RVVMSNCGL-KLDLVSYNVLITGLCAKGDMAL 1017
Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLL-RAKRMLDVMMLLADMIKMGIVPDAVINQ 547
A +L+ +M+ D + TY ++RGLL R ++L D++ G + ++Q
Sbjct: 1018 AFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGFITSMSLSQ 1074
Score = 180 bits (456), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 202/414 (48%), Gaps = 16/414 (3%)
Query: 175 SMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGL 234
++ + R C P++Y + L+ Y + + +LE + M + P+V T ++ +
Sbjct: 111 ALMTTYRLCNSNPSVY--DILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSV 168
Query: 235 CKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDV 294
K GE + +F M K + P++ +N LI+ C G+ ++ L +MEK +P +
Sbjct: 169 VKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTI 228
Query: 295 FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
TYN ++ C G+ + A LL M +G+ A+V TYN LI C+ + K +
Sbjct: 229 VTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRD 288
Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
M ++ + PN VT+++LI+G G + A L EM+ L P+ V F ALIDG +GN
Sbjct: 289 MRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGN 348
Query: 415 MKETLRLYKEMLEAK-ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH 473
KE L+++ M+EAK +TPS + L+ GL KN A F++ G C
Sbjct: 349 FKEALKMF-YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRN---GVCV-GR 403
Query: 474 VLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLAD 533
+ Y +I LC +G + +A L ++M D + PD TY+ ++ G + R ++
Sbjct: 404 ITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCR 463
Query: 534 MIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSF 587
+ ++G+ P+ +I ++ G LK A R E + EGHT F
Sbjct: 464 IYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMI--------LEGHTRDHF 509
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 273 bits (699), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 150/495 (30%), Positives = 266/495 (53%), Gaps = 4/495 (0%)
Query: 77 KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVM 136
K P+I N LL+ + K KF+ V E+M G+ D+ TY + I+C C + +
Sbjct: 76 KSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLS 135
Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
AL + +M+ G EP +V + L++G C+ ++ +A ++ M E G P+ +T+ L+
Sbjct: 136 LALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLI 195
Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
G + A+ +M+ QP++VT+G +++GLCK G++ A + M K +
Sbjct: 196 HGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE 255
Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
++ +YN +IDG CK ++ +A++L +EM+ I PDVFTY+ LI LC G+ A L
Sbjct: 256 ADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRL 315
Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
L M + I NVVT+++LID + KEG + +A + +M ++ ++P++ T+SSLI+G C
Sbjct: 316 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 375
Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
+D A ++ M+ K P+VV ++ LI G K ++E + L++EM + + + T
Sbjct: 376 HDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 435
Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
++LIHG F+ NA F + PN + Y ++ LC +G++ KA +F
Sbjct: 436 YTTLIHGFFQARDCDNAQMVFKQMVSVG----VHPNILTYNILLDGLCKNGKLAKAMVVF 491
Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
++ + PD TY M+ G+ +A ++ D L ++ G+ P+ + M+ G+
Sbjct: 492 EYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRK 551
Query: 557 GDLKSAFRCSEFLKE 571
G + A + +KE
Sbjct: 552 GSKEEADSLLKKMKE 566
Score = 249 bits (636), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 143/493 (29%), Positives = 248/493 (50%), Gaps = 7/493 (1%)
Query: 54 VFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEM 110
+S I F + AL V K+ L P I ++LLNG + ++M
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 179
Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
V G D T+ LI +A+ L D+M+ +G +P +V Y +++GLC +
Sbjct: 180 VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239
Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
A S+ + M + + ++ YN ++DG CK ++ AL + EM + ++P+V T+ L
Sbjct: 240 DLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSL 299
Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
+ LC G A M + + PN+ ++ LID K G L EA L EM K I
Sbjct: 300 ISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 359
Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
PD+FTY+ LI G C +L+ A+ + + M + NVVTY++LI G+CK +E+ +
Sbjct: 360 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGME 419
Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
+ +M+++G+ N VT+++LI G +A + D A ++ +MV + P+++ + L+DGL
Sbjct: 420 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 479
Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
K+G + + + +++ + + + P ++T + +I G+ K G++ + F + K S
Sbjct: 480 KNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKG----VS 535
Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
PN + Y +I C G +A L M+ D P++ TY T++R LR L
Sbjct: 536 PNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAEL 595
Query: 531 LADMIKMGIVPDA 543
+ +M G DA
Sbjct: 596 IKEMRSCGFAGDA 608
Score = 248 bits (633), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 143/445 (32%), Positives = 241/445 (54%), Gaps = 13/445 (2%)
Query: 134 DVMK---ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLY 190
D++K A++LF +M+ P++V + L+ + NK S+ M+ G+ +LY
Sbjct: 60 DIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLY 119
Query: 191 TYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM 250
TY+ ++ +C+ + ++ AL +M+ +P++VT L++G C + A M
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 179
Query: 251 AKFGVFPNIFVYNCLIDG---HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGV 307
+ G P+ F + LI G H KA EA++L +M + PD+ TY ++ GLC
Sbjct: 180 VEMGYKPDTFTFTTLIHGLFLHNKAS---EAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
Query: 308 GQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTF 367
G ++ A LL+KM K I A+VV YN++IDG CK M+ AL++ ++M KG+ P+V T+
Sbjct: 237 GDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTY 296
Query: 368 SSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE 427
SSLI C G A L ++M+ + + P+VV F+ALID K+G + E +LY EM++
Sbjct: 297 SSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 356
Query: 428 AKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDG 487
I P +FT SSLI+G + R+ A + F K C PN V Y+ +I+ C
Sbjct: 357 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD----CFPNVVTYSTLIKGFCKAK 412
Query: 488 QILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQ 547
++ + +LF +M L + TYTT++ G +A+ + M+ M+ +G+ P+ +
Sbjct: 413 RVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYN 472
Query: 548 VMVRGYQENGDLKSAFRCSEFLKES 572
+++ G +NG L A E+L+ S
Sbjct: 473 ILLDGLCKNGKLAKAMVVFEYLQRS 497
Score = 162 bits (409), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/306 (31%), Positives = 156/306 (50%), Gaps = 6/306 (1%)
Query: 49 KFNPSV--FSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSV 103
K NP+V FS LI AF + G + EA +Y K + P I ++L+NG + D
Sbjct: 323 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 382
Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
+E M+ +VVTY LI C V + + LF EM +G+ V YT LIHG
Sbjct: 383 KHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHG 442
Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
A+ +F+ M GV PN+ TYN L+DG CK + +A+ + + ++P+
Sbjct: 443 FFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPD 502
Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
+ T+ ++++G+CK G++ F +++ GV PN+ YN +I G C+ G+ EA SL
Sbjct: 503 IYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLK 562
Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
+M++ P+ TYN LI+ G E + L+++M G + T L+ +G
Sbjct: 563 KMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI-GLVTNMLHDG 621
Query: 344 DMEKAL 349
++K+
Sbjct: 622 RLDKSF 627
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 122/276 (44%), Gaps = 4/276 (1%)
Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK 358
IL L + +++ A L M K ++V +N L+ K E +S+ QM
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
G+ ++ T+S I+ C+ + A+ + +M+ PD+V ++L++G + +
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
+ L +M+E P FT ++LIHGLF + + S A+ D+ C P+ V Y
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVAL----VDQMVQRGCQPDLVTYGT 228
Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
++ LC G I A L M + D Y T++ GL + K M D + L +M G
Sbjct: 229 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKG 288
Query: 539 IVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
I PD ++ G A R + E +I
Sbjct: 289 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKI 324
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 272 bits (696), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 159/544 (29%), Positives = 271/544 (49%), Gaps = 39/544 (7%)
Query: 52 PSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYE 108
P ++ I S+ G +E+A ++ + ++P QA +L+ G ++ +E
Sbjct: 347 PYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLV 406
Query: 109 EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN 168
EM +V TYG ++ C GD+ A N+ EMI G P VVIYT LI +
Sbjct: 407 EMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNS 466
Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
+ +A + + M+E G+ P+++ YN+L+ G K ++ A F EM+ + L+PN T+G
Sbjct: 467 RFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYG 526
Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMS-------- 280
+ G + E +A + M + GV PN + LI+ +CK G + EA S
Sbjct: 527 AFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQ 586
Query: 281 ---------------------------LCSEMEKFEISPDVFTYNILIKGLCGVGQLEGA 313
+ EM I+PDVF+Y +LI G +G ++ A
Sbjct: 587 GILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKA 646
Query: 314 EGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDG 373
+ +M +EG+ NV+ YN L+ G+C+ G++EKA + +M+ KG+ PN VT+ ++IDG
Sbjct: 647 SSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDG 706
Query: 374 QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
CK+G++ A L+ EM +K LVPD V+T L+DG + +++ + ++ + S
Sbjct: 707 YCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKG-CASS 765
Query: 434 VFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
++LI+ +FK G+ D + + PN V Y +I LC +G + A
Sbjct: 766 TAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAK 825
Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
+LF M++ NL P TYT++L G + R ++ + + I GI PD ++ V++ +
Sbjct: 826 ELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAF 885
Query: 554 QENG 557
+ G
Sbjct: 886 LKEG 889
Score = 240 bits (613), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 164/576 (28%), Positives = 263/576 (45%), Gaps = 63/576 (10%)
Query: 54 VFSTLIIAFSEMGHIEEALWVYRK---IEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
+F L + G+IEEA++V+ +E++P + C LL+ L++ + D W+ Y+ M
Sbjct: 153 LFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGM 212
Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVM---------------------KALNLFDEMIDKG 149
V +V DV TY +LI C G+V AL L + MI KG
Sbjct: 213 VERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKG 272
Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
+ P Y +LI GLC ++ +A+S+ M GV + +TY+ L+DG K + + A
Sbjct: 273 LVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAK 332
Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
HEM+ H + + + + K G + A F M G+ P Y LI+G+
Sbjct: 333 GLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGY 392
Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
C+ N+ + L EM+K I +TY ++KG+C G L+GA ++++M G NV
Sbjct: 393 CREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNV 452
Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
V Y +LI + + A+ V +M E+G+ P++ ++SLI G KA +D A E
Sbjct: 453 VIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVE 512
Query: 390 MVIKSLVPDVVVFTALIDG-----------------------------------LSKDGN 414
MV L P+ + A I G K G
Sbjct: 513 MVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGK 572
Query: 415 MKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHV 474
+ E Y+ M++ I T + L++GLFKN ++ +A F E G +P+
Sbjct: 573 VIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFRE----MRGKGIAPDVF 628
Query: 475 LYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADM 534
Y +I G + KAS +F +M + L P+ Y +L G R+ + LL +M
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM 688
Query: 535 IKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLK 570
G+ P+AV ++ GY ++GDL AFR + +K
Sbjct: 689 SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMK 724
Score = 229 bits (585), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 141/483 (29%), Positives = 235/483 (48%), Gaps = 4/483 (0%)
Query: 80 VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
++P + L++GL K + + EM G+ D TY +LID + A
Sbjct: 273 LVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAK 332
Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
L EM+ GI +Y I + E M +A+++F M G++P Y +L++GY
Sbjct: 333 GLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGY 392
Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
C+ +V + E EM N+ + T+G ++ G+C G+L A N M G PN+
Sbjct: 393 CREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNV 452
Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
+Y LI + +AM + EM++ I+PD+F YN LI GL +++ A L +
Sbjct: 453 VIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVE 512
Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGN 379
M + G+ N TY + I GY + + A +M E GV PN V + LI+ CK G
Sbjct: 513 MVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGK 572
Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
+ A Y MV + ++ D +T L++GL K+ + + +++EM I P VF+
Sbjct: 573 VIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGV 632
Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
LI+G K G + A + F E ++ +PN ++Y ++ C G+I KA +L +M
Sbjct: 633 LINGFSKLGNMQKASSIFDEMVEEG----LTPNVIIYNMLLGGFCRSGEIEKAKELLDEM 688
Query: 500 RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
L P+ TY T++ G ++ + + L +M G+VPD+ + +V G D+
Sbjct: 689 SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDV 748
Query: 560 KSA 562
+ A
Sbjct: 749 ERA 751
Score = 226 bits (576), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 141/476 (29%), Positives = 250/476 (52%), Gaps = 15/476 (3%)
Query: 52 PSVF--STLIIAFSEMGHIEEAL-WVYRKIE--VLPAIQACNALLNGLIKKGKFDSVWEF 106
P +F ++LII S+ ++EA ++ +E + P A ++G I+ +F S ++
Sbjct: 485 PDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKY 544
Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
+EM CG++ + V LI+ C +G V++A + + M+D+GI YT+L++GL
Sbjct: 545 VKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFK 604
Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
+K+ +AE +FR MR G+ P++++Y L++G+ K+ ++ +A + EM+ L PNV+
Sbjct: 605 NDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVII 664
Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
+ +L+ G C+ GE+ A M+ G+ PN Y +IDG+CK+G+L EA L EM+
Sbjct: 665 YNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMK 724
Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
+ PD F Y L+ G C + +E A + K+G ++ +N+LI+ K G E
Sbjct: 725 LKGLVPDSFVYTTLVDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWVFKFGKTE 783
Query: 347 KALSVCSQMTEKGVE----PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF 402
V +++ + + PN VT++ +ID CK GN++AA L+ +M +L+P V+ +
Sbjct: 784 LKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITY 843
Query: 403 TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL---NFFLE 459
T+L++G K G E ++ E + A I P S +I+ K G + AL +
Sbjct: 844 TSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFA 903
Query: 460 KTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
K DG C + A++ G++ A K+ +M PD+ T ++
Sbjct: 904 KNAVDDG--CKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELI 957
Score = 197 bits (500), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 145/481 (30%), Positives = 217/481 (45%), Gaps = 62/481 (12%)
Query: 5 LANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSE 64
L+ AK AR + ++ EN LK P+ Y F S I A SE
Sbjct: 497 LSKAKRMDEARSFLVEMVENGLK---PNAFTYGAF---------------ISGYIEA-SE 537
Query: 65 MGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGV 124
++ + R+ VLP C L+N KKGK Y MV G++ D TY V
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTV 597
Query: 125 LIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECG 184
L++ V A +F EM KGI P V Y +LI+G M +A S+F M E G
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657
Query: 185 VVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAG 244
+ PN+ YN L+ G+C+ ++ +A E EM L PN VT+ ++DG CK G+L A
Sbjct: 658 LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAF 717
Query: 245 NFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL-------CSEME----------- 286
F M G+ P+ FVY L+DG C+ ++ A+++ C+
Sbjct: 718 RLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVF 777
Query: 287 -------KFEI-------------SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
K E+ P+ TYNI+I LC G LE A+ L +M ++
Sbjct: 778 KFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLM 837
Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL 386
V+TY SL++GY K G + V + G+EP+ + +S +I+ K G A+ L
Sbjct: 838 PTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVL 897
Query: 387 YTEMVIKSLVPD-----VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
+M K+ V D + AL+ G +K G M+ ++ + M+ + P TV LI
Sbjct: 898 VDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELI 957
Query: 442 H 442
+
Sbjct: 958 N 958
Score = 196 bits (499), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 151/603 (25%), Positives = 268/603 (44%), Gaps = 79/603 (13%)
Query: 20 DVTENLLKSRK---PHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYR 76
+V ++L+S++ P + S FN ++S ++ + FS L + G E+AL V
Sbjct: 63 EVVLSVLRSKRVDDPSKL-LSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKALSVVE 121
Query: 77 KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLC-----GLVADVVTYGVLIDCCCG 131
+ +I++ V E + +V C G D V +G+L D
Sbjct: 122 R----------------MIERNW--PVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIA 163
Query: 132 QGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYT 191
+G + +A+ +F + + P + +L+ L N++ +++ M E VV ++ T
Sbjct: 164 KGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKT 223
Query: 192 YNALMDGYCKVA---------------------DVNRALEFYHEMLHHNLQPNVVTFGVL 230
Y+ L+ +C+ +V+ AL+ M+ L P T+ VL
Sbjct: 224 YHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVL 283
Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
+DGLCK+ L A + V M GV + Y+ LIDG K N A L EM I
Sbjct: 284 IDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGI 343
Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
+ + Y+ I + G +E A+ L M G++ Y SLI+GYC+E ++ +
Sbjct: 344 NIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYE 403
Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
+ +M ++ + + T+ +++ G C +G++D A + EM+ P+VV++T LI
Sbjct: 404 LLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFL 463
Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK------- 463
++ + +R+ KEM E I P +F +SLI GL K R+ A +F +E +
Sbjct: 464 QNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAF 523
Query: 464 TDGGYCS------------------------PNHVLYAAIIQALCYDGQILKASKLFSDM 499
T G + S PN VL +I C G++++A + M
Sbjct: 524 TYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSM 583
Query: 500 RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
+ D TYT ++ GL + ++ D + +M GI PD V++ G+ + G++
Sbjct: 584 VDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNM 643
Query: 560 KSA 562
+ A
Sbjct: 644 QKA 646
Score = 154 bits (388), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 117/465 (25%), Positives = 211/465 (45%), Gaps = 44/465 (9%)
Query: 130 CGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNL 189
C G KAL++ + MI++ P +++ ++ C++ F + GV+
Sbjct: 108 CNFGSFEKALSVVERMIERNW-PVAEVWSSIVR--CSQE--------FVGKSDDGVL--- 153
Query: 190 YTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVH 249
+ L DGY + A+ + + L P + VL+D L + L + +
Sbjct: 154 --FGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKG 211
Query: 250 MAKFGVFPNIFVYNCLIDGHCKAGN-------LFE--------------AMSLCSEMEKF 288
M + V ++ Y+ LI HC+AGN LF+ A+ L M
Sbjct: 212 MVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICK 271
Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
+ P +TY++LI GLC + +LE A+ LL +M G+ + TY+ LIDG K + + A
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331
Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
+ +M G+ + I K G ++ A L+ M+ L+P + +LI+G
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391
Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
++ N+++ L EM + I S +T +++ G+ +G + A N E
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMI----ASG 447
Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
C PN V+Y +I+ + + A ++ +M+ + PD Y +++ GL +AKRM +
Sbjct: 448 CRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEAR 507
Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESR 573
L +M++ G+ P+A + GY E + SA +++KE R
Sbjct: 508 SFLVEMVENGLKPNAFTYGAFISGYIEASEFASA---DKYVKEMR 549
Score = 100 bits (248), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 136/337 (40%), Gaps = 83/337 (24%)
Query: 52 PSVFS--TLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEF 106
P VFS LI FS++G++++A ++ ++ + P + N LL G + G+ + E
Sbjct: 625 PDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684
Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
+EM + GL + VTY +ID C GD+ +A LFDEM KG+ P +YT L+ G C
Sbjct: 685 LDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR 744
Query: 167 ENKMVEAESMFRSMRE-CGVV-------------------------------------PN 188
N + A ++F + ++ C PN
Sbjct: 745 LNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPN 804
Query: 189 LYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFV 248
TYN ++D CK ++ A E +H+M + NL P V+T+ L++G K+G F
Sbjct: 805 DVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFD 864
Query: 249 HMAKFGVFPNIFVYNCLID----------------------------------------G 268
G+ P+ +Y+ +I+ G
Sbjct: 865 EAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSG 924
Query: 269 HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
K G + A + M + + PD T LI C
Sbjct: 925 FAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 77/160 (48%), Gaps = 8/160 (5%)
Query: 49 KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWE 105
K N ++ +I + G++E A ++ +++ ++P + +LLNG K G+ ++
Sbjct: 802 KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFP 861
Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEM-----IDKGIEPTVVIYTIL 160
++E + G+ D + Y V+I+ +G KAL L D+M +D G + ++ L
Sbjct: 862 VFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRAL 921
Query: 161 IHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
+ G +M AE + +M +P+ T L++ C
Sbjct: 922 LSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 269 bits (687), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 158/515 (30%), Positives = 274/515 (53%), Gaps = 9/515 (1%)
Query: 77 KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVM 136
K P+I + LL+ + K KFD V E+M G+ ++ TY +LI+C C + +
Sbjct: 74 KSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLS 133
Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
AL + +M+ G EP +V L++G C+ N++ +A S+ M E G P+ +T+N L+
Sbjct: 134 LALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLI 193
Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
G + + A+ M+ QP++VT+G++++GLCK G++ A + M + +
Sbjct: 194 HGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIE 253
Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
P + +YN +ID C N+ +A++L +EM+ I P+V TYN LI+ LC G+ A L
Sbjct: 254 PGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRL 313
Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
L M + I NVVT+++LID + KEG + +A + +M ++ ++P++ T+SSLI+G C
Sbjct: 314 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 373
Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
+D A ++ M+ K P+VV + LI G K + E + L++EM + + + T
Sbjct: 374 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVT 433
Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
++LIHG F+ NA F K +DG P+ + Y+ ++ LC +G++ A +F
Sbjct: 434 YTTLIHGFFQARECDNAQIVF--KQMVSDG--VLPDIMTYSILLDGLCNNGKVETALVVF 489
Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
++ + PD TY M+ G+ +A ++ D L + G+ P+ V M+ G+
Sbjct: 490 EYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRK 549
Query: 557 G---DLKSAFRCSEFLKESRIGSSETEGHTTRSFL 588
G + + FR E +E + S T R+ L
Sbjct: 550 GLKEEADALFR--EMKEEGPLPDSGTYNTLIRAHL 582
Score = 249 bits (637), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 138/437 (31%), Positives = 237/437 (54%), Gaps = 4/437 (0%)
Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
A+NLF +M+ P++V ++ L+ + NK S+ M+ G+ NLYTY+ L++
Sbjct: 65 AVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILIN 124
Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
+C+ + ++ AL +M+ +P++VT L++G C + A + M + G P
Sbjct: 125 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQP 184
Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
+ F +N LI G + EA++L M PD+ TY I++ GLC G ++ A LL
Sbjct: 185 DSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLL 244
Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
+KM + I VV YN++ID C ++ AL++ ++M KG+ PNVVT++SLI C
Sbjct: 245 KKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 304
Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
G A L ++M+ + + P+VV F+ALID K+G + E +LY EM++ I P +FT
Sbjct: 305 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 364
Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
SSLI+G + R+ A + F K C PN V Y +I+ C ++ + +LF
Sbjct: 365 SSLINGFCMHDRLDEAKHMFELMISKD----CFPNVVTYNTLIKGFCKAKRVDEGMELFR 420
Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
+M L + TYTT++ G +A+ + ++ M+ G++PD + +++ G NG
Sbjct: 421 EMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNG 480
Query: 558 DLKSAFRCSEFLKESRI 574
+++A E+L+ S++
Sbjct: 481 KVETALVVFEYLQRSKM 497
Score = 233 bits (594), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 131/414 (31%), Positives = 219/414 (52%), Gaps = 4/414 (0%)
Query: 88 NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
N L++GL + + + MV+ G D+VTYG++++ C +GD+ AL+L +M
Sbjct: 190 NTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQ 249
Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
IEP VVIY +I LCN + +A ++F M G+ PN+ TYN+L+ C +
Sbjct: 250 GKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSD 309
Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
A +M+ + PNVVTF L+D K G+L A + M K + P+IF Y+ LI+
Sbjct: 310 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 369
Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
G C L EA + M + P+V TYN LIKG C +++ L ++M + G++
Sbjct: 370 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVG 429
Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
N VTY +LI G+ + + + A V QM GV P+++T+S L+DG C G ++ A+ ++
Sbjct: 430 NTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVF 489
Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
+ + PD+ + +I+G+ K G +++ L+ + + P+V T ++++ G +
Sbjct: 490 EYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRK 549
Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
G A F E K +G P+ Y +I+A DG +++L +MRS
Sbjct: 550 GLKEEADALFREM--KEEGPL--PDSGTYNTLIRAHLRDGDKAASAELIREMRS 599
Score = 230 bits (586), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 127/398 (31%), Positives = 207/398 (52%), Gaps = 3/398 (0%)
Query: 54 VFSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
F+TLI EA+ + ++ V P + ++NGL K+G D ++M
Sbjct: 188 TFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKM 247
Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
+ VV Y +ID C +V ALNLF EM +KGI P VV Y LI LCN +
Sbjct: 248 EQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 307
Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
+A + M E + PN+ T++AL+D + K + A + Y EM+ ++ P++ T+ L
Sbjct: 308 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 367
Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
++G C L A + F M FPN+ YN LI G CKA + E M L EM + +
Sbjct: 368 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGL 427
Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
+ TY LI G + + A+ + ++M +G+L +++TY+ L+DG C G +E AL
Sbjct: 428 VGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALV 487
Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
V + +EP++ T++ +I+G CKAG ++ L+ + +K + P+VV +T ++ G
Sbjct: 488 VFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFC 547
Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
+ G +E L++EM E P T ++LI ++G
Sbjct: 548 RKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDG 585
Score = 217 bits (552), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 136/474 (28%), Positives = 229/474 (48%), Gaps = 6/474 (1%)
Query: 99 KFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYT 158
K D + +MV +V + L+ ++L ++M + GI + Y+
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 159 ILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
ILI+ C +++ A ++ M + G P++ T N+L++G+C ++ A+ +M+
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 219 NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
QP+ TF L+ GL + A M G P++ Y +++G CK G++ A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
+SL +ME+ +I P V YN +I LC + A L +M +GI NVVTYNSLI
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
C G A + S M E+ + PNVVTFS+LID K G + A LY EM+ +S+ PD
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360
Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
+ +++LI+G + E +++ M+ P+V T ++LI G K R+ + F
Sbjct: 361 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFR 420
Query: 459 EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
E + + G N V Y +I + A +F M SD + PD TY+ +L GL
Sbjct: 421 EMSQRGLVG----NTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGL 476
Query: 519 LRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR--CSEFLK 570
++ +++ + + + PD +M+ G + G ++ + CS LK
Sbjct: 477 CNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 530
Score = 172 bits (435), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 197/388 (50%), Gaps = 21/388 (5%)
Query: 182 ECGVVPNLYT--------YNALMDGYCKVADVNR--------ALEFYHEMLHHNLQPNVV 225
+CG P ++ ++ + Y K++ +NR A+ + +M+ P++V
Sbjct: 24 KCGTAPPSFSHCSFWVRDFSGVRYDYRKIS-INRLNDLKLDDAVNLFGDMVKSRPFPSIV 82
Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
F L+ + K+ + + M G+ N++ Y+ LI+ C+ L A+++ ++M
Sbjct: 83 EFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKM 142
Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
K PD+ T N L+ G C ++ A L+ +M + G + T+N+LI G +
Sbjct: 143 MKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRA 202
Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
+A+++ +M KG +P++VT+ +++G CK G+ID A+ L +M + P VV++ +
Sbjct: 203 SEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTI 262
Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
ID L N+ + L L+ EM I P+V T +SLI L GR S+A + ++
Sbjct: 263 IDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK- 321
Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
+PN V ++A+I A +G++++A KL+ +M ++ PD TY++++ G R+
Sbjct: 322 ---INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 378
Query: 526 DVMMLLADMIKMGIVPDAVINQVMVRGY 553
+ + MI P+ V +++G+
Sbjct: 379 EAKHMFELMISKDCFPNVVTYNTLIKGF 406
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 269 bits (687), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 153/481 (31%), Positives = 259/481 (53%), Gaps = 4/481 (0%)
Query: 77 KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVM 136
K LP+I N LL+ + K KFD V E+M G+ ++ TY +LI+C C + +
Sbjct: 78 KSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQIS 137
Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
AL L +M+ G EP++V + L++G C+ ++ +A ++ M E G P+ T+ L+
Sbjct: 138 LALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLI 197
Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
G + A+ M+ QPN+VT+GV+++GLCK G++ A N M +
Sbjct: 198 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE 257
Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
N+ +Y+ +ID CK + +A++L +EME + P+V TY+ LI LC + A L
Sbjct: 258 ANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRL 317
Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
L M + I NVVT+N+LID + KEG + +A + +M ++ ++P++ T+SSLI+G C
Sbjct: 318 LSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 377
Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
+D A ++ M+ K P+VV + LI+G K + E + L++EM + + + T
Sbjct: 378 HDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVT 437
Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
++LIHG F+ NA F K +DG + PN + Y ++ LC +G++ KA +F
Sbjct: 438 YTTLIHGFFQARDCDNAQMVF--KQMVSDGVH--PNIMTYNTLLDGLCKNGKLEKAMVVF 493
Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
++ + P TY M+ G+ +A ++ D L + G+ PD +I M+ G+
Sbjct: 494 EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRK 553
Query: 557 G 557
G
Sbjct: 554 G 554
Score = 233 bits (593), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 139/440 (31%), Positives = 227/440 (51%), Gaps = 10/440 (2%)
Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
A+ LF M+ P++ + L+ + K S+ M+ G+ NLYTYN L++
Sbjct: 69 AIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILIN 128
Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
+C+ + ++ AL +M+ +P++VT L++G C + A M + G P
Sbjct: 129 CFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP 188
Query: 258 NIFVYNCLIDG---HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
+ + LI G H KA EA++L M + P++ TY +++ GLC G ++ A
Sbjct: 189 DTITFTTLIHGLFLHNKAS---EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245
Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
LL KM I ANVV Y+++ID CK + AL++ ++M KGV PNV+T+SSLI
Sbjct: 246 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 305
Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
C A L ++M+ + + P+VV F ALID K+G + E +LY EM++ I P +
Sbjct: 306 CNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 365
Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
FT SSLI+G + R+ A + F K C PN V Y +I C +I + +
Sbjct: 366 FTYSSLINGFCMHDRLDEAKHMFELMISKD----CFPNVVTYNTLINGFCKAKRIDEGVE 421
Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
LF +M L + TYTT++ G +A+ + M+ M+ G+ P+ + ++ G
Sbjct: 422 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 481
Query: 555 ENGDLKSAFRCSEFLKESRI 574
+NG L+ A E+L+ S++
Sbjct: 482 KNGKLEKAMVVFEYLQRSKM 501
Score = 226 bits (576), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 116/355 (32%), Positives = 190/355 (53%)
Query: 82 PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
P + ++NGL K+G D + +M + A+VV Y +ID C ALNL
Sbjct: 223 PNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNL 282
Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
F EM +KG+ P V+ Y+ LI LCN + +A + M E + PN+ T+NAL+D + K
Sbjct: 283 FTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVK 342
Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
+ A + Y EM+ ++ P++ T+ L++G C L A + F M FPN+
Sbjct: 343 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 402
Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
YN LI+G CKA + E + L EM + + + TY LI G + A+ + ++M
Sbjct: 403 YNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 462
Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
+G+ N++TYN+L+DG CK G +EKA+ V + +EP + T++ +I+G CKAG ++
Sbjct: 463 SDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 522
Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
L+ + +K + PDV+++ +I G + G +E L+++M E P T
Sbjct: 523 DGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 200 bits (509), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 107/333 (32%), Positives = 187/333 (56%), Gaps = 5/333 (1%)
Query: 39 FNALNSLEIPKF--NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNG 93
FN LN +E K N ++ST+I + + H ++AL ++ ++E V P + ++L++
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304
Query: 94 LIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPT 153
L ++ +M+ + +VVT+ LID +G +++A L+DEMI + I+P
Sbjct: 305 LCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 364
Query: 154 VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYH 213
+ Y+ LI+G C +++ EA+ MF M PN+ TYN L++G+CK ++ +E +
Sbjct: 365 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFR 424
Query: 214 EMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG 273
EM L N VT+ L+ G + + A F M GV PNI YN L+DG CK G
Sbjct: 425 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 484
Query: 274 NLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYN 333
L +AM + +++ ++ P ++TYNI+I+G+C G++E L + +G+ +V+ YN
Sbjct: 485 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYN 544
Query: 334 SLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVT 366
++I G+C++G E+A ++ +M E G P+ T
Sbjct: 545 TMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 268 bits (684), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 155/486 (31%), Positives = 258/486 (53%), Gaps = 4/486 (0%)
Query: 77 KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVM 136
K P+I + LL+ + K KFD V E+M G+ + TY +LI+C C + +
Sbjct: 74 KSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLP 133
Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
AL + +M+ G EP +V + L++G C+ ++ EA ++ M G PN T+N L+
Sbjct: 134 LALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLI 193
Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
G + A+ M+ QP++VT+GV+++GLCK G+ A N M + +
Sbjct: 194 HGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLE 253
Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
P + +YN +IDG CK ++ +A++L EME I P+V TY+ LI LC G+ A L
Sbjct: 254 PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 313
Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
L M + I +V T+++LID + KEG + +A + +M ++ ++P++VT+SSLI+G C
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373
Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
+D A ++ MV K PDVV + LI G K ++E + +++EM + + + T
Sbjct: 374 HDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT 433
Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
+ LI GLF+ G A F E +DG PN + Y ++ LC +G++ KA +F
Sbjct: 434 YNILIQGLFQAGDCDMAQEIFKEMV--SDG--VPPNIMTYNTLLDGLCKNGKLEKAMVVF 489
Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
++ + P TY M+ G+ +A ++ D L ++ G+ PD V M+ G+
Sbjct: 490 EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRK 549
Query: 557 GDLKSA 562
G + A
Sbjct: 550 GSKEEA 555
Score = 236 bits (603), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 130/401 (32%), Positives = 211/401 (52%), Gaps = 3/401 (0%)
Query: 51 NPSVFSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFY 107
N F+TLI EA+ + ++ P + ++NGL K+G D +
Sbjct: 185 NTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLL 244
Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
+M L V+ Y +ID C + ALNLF EM KGI P VV Y+ LI LCN
Sbjct: 245 NKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNY 304
Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
+ +A + M E + P+++T++AL+D + K + A + Y EM+ ++ P++VT+
Sbjct: 305 GRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTY 364
Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
L++G C L A F M FP++ YN LI G CK + E M + EM +
Sbjct: 365 SSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQ 424
Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
+ + TYNILI+GL G + A+ + ++M +G+ N++TYN+L+DG CK G +EK
Sbjct: 425 RGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEK 484
Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
A+ V + +EP + T++ +I+G CKAG ++ L+ + +K + PDVV + +I
Sbjct: 485 AMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMIS 544
Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
G + G+ +E L+KEM E P+ ++LI ++G
Sbjct: 545 GFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDG 585
Score = 231 bits (588), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 139/440 (31%), Positives = 227/440 (51%), Gaps = 10/440 (2%)
Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
A+ LF EM+ P+++ ++ L+ + NK S+ M+ G+ N YTY+ L++
Sbjct: 65 AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILIN 124
Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
+C+ + + AL +M+ +PN+VT L++G C + A M G P
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 184
Query: 258 NIFVYNCLIDG---HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
N +N LI G H KA EAM+L M PD+ TY +++ GLC G + A
Sbjct: 185 NTVTFNTLIHGLFLHNKAS---EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
LL KM + + V+ YN++IDG CK M+ AL++ +M KG+ PNVVT+SSLI
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
C G A L ++M+ + + PDV F+ALID K+G + E +LY EM++ I PS+
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361
Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
T SSLI+G + R+ A F K +C P+ V Y +I+ C ++ + +
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSK----HCFPDVVTYNTLIKGFCKYKRVEEGME 417
Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
+F +M L + TY +++GL +A + +M+ G+ P+ + ++ G
Sbjct: 418 VFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLC 477
Query: 555 ENGDLKSAFRCSEFLKESRI 574
+NG L+ A E+L+ S++
Sbjct: 478 KNGKLEKAMVVFEYLQRSKM 497
Score = 221 bits (563), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 138/472 (29%), Positives = 233/472 (49%), Gaps = 5/472 (1%)
Query: 92 NGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIE 151
NGL + K D + EMV ++ + L+ ++L ++M + GI
Sbjct: 55 NGL-SELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113
Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
Y+ILI+ C +++ A ++ M + G PN+ T ++L++GYC ++ A+
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173
Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
+M QPN VTF L+ GL + A M G P++ Y +++G CK
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 233
Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
G+ A +L ++ME+ ++ P V YN +I GLC ++ A L ++M +GI NVVT
Sbjct: 234 RGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 293
Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
Y+SLI C G A + S M E+ + P+V TFS+LID K G + A LY EMV
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353
Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
+S+ P +V +++LI+G + E ++++ M+ P V T ++LI G K R+
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVE 413
Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
+ F E + + G N V Y +IQ L G A ++F +M SD + P+ TY
Sbjct: 414 EGMEVFREMSQRGLVG----NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTY 469
Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
T+L GL + ++ M++ + + + P +M+ G + G ++ +
Sbjct: 470 NTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 521
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 267 bits (682), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 152/473 (32%), Positives = 261/473 (55%), Gaps = 12/473 (2%)
Query: 51 NPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFY 107
N ++ TLI + S+ + EAL + ++ ++ P + N ++ GL K + + +
Sbjct: 251 NSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMV 310
Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
M++ G D +TYG L++ C G V A +LF + +P +VI+ LIHG
Sbjct: 311 NRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTLIHGFVTH 366
Query: 168 NKMVEAESMFRSM-RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
++ +A+++ M G+VP++ TYN+L+ GY K V ALE H+M + +PNV +
Sbjct: 367 GRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYS 426
Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
+ +L+DG CK+G++ A N M+ G+ PN +NCLI CK + EA+ + EM
Sbjct: 427 YTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMP 486
Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
+ PDV+T+N LI GLC V +++ A LL+ M EG++AN VTYN+LI+ + + G+++
Sbjct: 487 RKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIK 546
Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
+A + ++M +G + +T++SLI G C+AG +D A L+ +M+ P + LI
Sbjct: 547 EARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILI 606
Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
+GL + G ++E + KEM+ TP + T +SLI+GL + GRI + L F K
Sbjct: 607 NGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMF----RKLQA 662
Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLL 519
P+ V + ++ LC G + A L + D P++ T++ +L+ ++
Sbjct: 663 EGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSII 715
Score = 241 bits (614), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 153/509 (30%), Positives = 249/509 (48%), Gaps = 11/509 (2%)
Query: 82 PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
P ++ N +L L+ + +M+ + + T+GV++ C ++ AL+L
Sbjct: 180 PTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSL 239
Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
+M G P VIY LIH L N++ EA + M G VP+ T+N ++ G CK
Sbjct: 240 LRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCK 299
Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
+N A + + ML P+ +T+G LM+GLCK+G + AA + F + K P I +
Sbjct: 300 FDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVI 355
Query: 262 YNCLIDGHCKAGNLFEAMSLCSEM-EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
+N LI G G L +A ++ S+M + I PDV TYN LI G G + A +L M
Sbjct: 356 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDM 415
Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
+G NV +Y L+DG+CK G +++A +V ++M+ G++PN V F+ LI CK I
Sbjct: 416 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRI 475
Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
A+ ++ EM K PDV F +LI GL + +K L L ++M+ + + T ++L
Sbjct: 476 PEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTL 535
Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSP-NHVLYAAIIQALCYDGQILKASKLFSDM 499
I+ + G I A E + SP + + Y ++I+ LC G++ KA LF M
Sbjct: 536 INAFLRRGEIKEARKLVNEMVFQG-----SPLDEITYNSLIKGLCRAGEVDKARSLFEKM 590
Query: 500 RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
D P N + ++ GL R+ + + + +M+ G PD V ++ G G +
Sbjct: 591 LRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRI 650
Query: 560 KSAFRCSEFLKESRIGSSETEGHTTRSFL 588
+ L+ I +T S+L
Sbjct: 651 EDGLTMFRKLQAEGIPPDTVTFNTLMSWL 679
Score = 218 bits (555), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 141/470 (30%), Positives = 231/470 (49%), Gaps = 11/470 (2%)
Query: 76 RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDV 135
RKI P + ++ + DS +M G V + V Y LI V
Sbjct: 211 RKIP--PTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRV 268
Query: 136 MKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNAL 195
+AL L +EM G P + +I GLC +++ EA M M G P+ TY L
Sbjct: 269 NEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYL 328
Query: 196 MDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHM-AKFG 254
M+G CK+ V+ A + ++ + +P +V F L+ G G L A M +G
Sbjct: 329 MNGLCKIGRVDAAKDLFYRI----PKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYG 384
Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
+ P++ YN LI G+ K G + A+ + +M P+V++Y IL+ G C +G+++ A
Sbjct: 385 IVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAY 444
Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
+L +M +G+ N V +N LI +CKE + +A+ + +M KG +P+V TF+SLI G
Sbjct: 445 NVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGL 504
Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
C+ I A+ L +M+ + +V + V + LI+ + G +KE +L EM+
Sbjct: 505 CEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDE 564
Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
T +SLI GL + G + A + F EK + DG +P+++ +I LC G + +A +
Sbjct: 565 ITYNSLIKGLCRAGEVDKARSLF-EKMLR-DGH--APSNISCNILINGLCRSGMVEEAVE 620
Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
+M PD T+ +++ GL RA R+ D + + + GI PD V
Sbjct: 621 FQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTV 670
Score = 197 bits (502), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 139/473 (29%), Positives = 218/473 (46%), Gaps = 39/473 (8%)
Query: 151 EPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALE 210
EPT Y +++ L + N A ++F M + P L+T+ +M +C V +++ AL
Sbjct: 179 EPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALS 238
Query: 211 FYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHC 270
+M H PN V + L+ L K + A M G P+ +N +I G C
Sbjct: 239 LLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLC 298
Query: 271 KAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE------- 323
K + EA + + M +PD TY L+ GLC +G+++ A+ L ++ K
Sbjct: 299 KFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNT 358
Query: 324 -------------------------GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK 358
GI+ +V TYNSLI GY KEG + AL V M K
Sbjct: 359 LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNK 418
Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
G +PNV +++ L+DG CK G ID A + EM L P+ V F LI K+ + E
Sbjct: 419 GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEA 478
Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
+ +++EM P V+T +SLI GL + I +AL +L + ++G N V Y
Sbjct: 479 VEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHAL--WLLRDMISEG--VVANTVTYNT 534
Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
+I A G+I +A KL ++M D TY ++++GL RA + L M++ G
Sbjct: 535 LINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594
Query: 539 IVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGHL 591
P + +++ G +G ++ A EF KE + S + T S + L
Sbjct: 595 HAPSNISCNILINGLCRSGMVEEAV---EFQKEMVLRGSTPDIVTFNSLINGL 644
Score = 153 bits (387), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 104/443 (23%), Positives = 205/443 (46%), Gaps = 11/443 (2%)
Query: 149 GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA 208
G + +Y +LI L + + + M++ G+V + ++M Y K +
Sbjct: 106 GYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQT 165
Query: 209 LEFYHEMLH-HNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
EM + ++ +P ++ V+++ L + A N F M + P +F + ++
Sbjct: 166 TRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMK 225
Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
C + A+SL +M K P+ Y LI L ++ A LL++M+ G +
Sbjct: 226 AFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVP 285
Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
+ T+N +I G CK + +A + ++M +G P+ +T+ L++G CK G +DAA L+
Sbjct: 286 DAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLF 345
Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEA-KITPSVFTVSSLIHGLFK 446
+ P++V+F LI G G + + + +M+ + I P V T +SLI+G +K
Sbjct: 346 YRIP----KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWK 401
Query: 447 NGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
G + AL + +K C PN Y ++ C G+I +A + ++M +D L+P
Sbjct: 402 EGLVGLALEVLHDMRNKG----CKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKP 457
Query: 507 DNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA-FRC 565
+ + ++ + R+ + + + +M + G PD ++ G E ++K A +
Sbjct: 458 NTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLL 517
Query: 566 SEFLKESRIGSSETEGHTTRSFL 588
+ + E + ++ T +FL
Sbjct: 518 RDMISEGVVANTVTYNTLINAFL 540
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 150/301 (49%), Gaps = 5/301 (1%)
Query: 52 PSVFSTLII--AFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEF 106
P+V+S I+ F ++G I+EA V ++ + P N L++ K+ + E
Sbjct: 422 PNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEI 481
Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
+ EM G DV T+ LI C ++ AL L +MI +G+ V Y LI+
Sbjct: 482 FREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLR 541
Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
++ EA + M G + TYN+L+ G C+ +V++A + +ML P+ ++
Sbjct: 542 RGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNIS 601
Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
+L++GLC+ G + A F M G P+I +N LI+G C+AG + + +++ +++
Sbjct: 602 CNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQ 661
Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
I PD T+N L+ LC G + A LL + ++G + N T++ L+ + ++
Sbjct: 662 AEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLD 721
Query: 347 K 347
+
Sbjct: 722 R 722
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 266 bits (680), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 161/538 (29%), Positives = 266/538 (49%), Gaps = 31/538 (5%)
Query: 35 CYSVFNALNSL-EIPK----FNPSVFSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQA 86
CY A+ E P+ +N + ++ +I ++G I+EA + +E+ P + +
Sbjct: 224 CYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVIS 283
Query: 87 CNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMI 146
+ ++NG + G+ D VW+ E M GL + YG +I C + +A F EMI
Sbjct: 284 YSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMI 343
Query: 147 DKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVN 206
+GI P V+YT LI G C + A F M + P++ TY A++ G+C++ D+
Sbjct: 344 RQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMV 403
Query: 207 RALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLI 266
A + +HEM L+P+ VTF L++G CK G ++ A HM + G PN+ Y LI
Sbjct: 404 EAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLI 463
Query: 267 DGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
DG CK G+L A L EM K + P++FTYN ++ GLC G +E A L+ + G+
Sbjct: 464 DGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLN 523
Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGL 386
A+ VTY +L+D YCK G+M+KA + +M KG++P +VTF+ L++G C G ++ L
Sbjct: 524 ADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL 583
Query: 387 YTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFK 446
M+ K + P+ F +L+ N+K +YK+M + P T +L+ G K
Sbjct: 584 LNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCK 643
Query: 447 NGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
+ A F E K G+ S + Y+ +I+ + L+A ++F MR + L
Sbjct: 644 ARNMKEAWFLFQEMKGK---GF-SVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAA 699
Query: 507 DNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQV--MVRGYQENGDLKSA 562
D ++ +D G PD +++ + ++ Y + L+ A
Sbjct: 700 DK-----------------EIFDFFSDTKYKGKRPDTIVDPIDEIIENYLVDEQLRGA 740
Score = 265 bits (676), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 149/510 (29%), Positives = 260/510 (50%), Gaps = 14/510 (2%)
Query: 51 NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKK-GKFDSVWEF 106
+P VF + G + EA V+ K+ ++ ++ +CN L L K K +
Sbjct: 174 DPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIV 233
Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
+ E G+ +V +Y ++I C G + +A +L M KG P V+ Y+ +++G C
Sbjct: 234 FREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCR 293
Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
++ + + M+ G+ PN Y Y +++ C++ + A E + EM+ + P+ V
Sbjct: 294 FGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVV 353
Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
+ L+DG CK G++RAA FF M + P++ Y +I G C+ G++ EA L EM
Sbjct: 354 YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 413
Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
+ PD T+ LI G C G ++ A + M + G NVVTY +LIDG CKEGD++
Sbjct: 414 CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 473
Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
A + +M + G++PN+ T++S+++G CK+GNI+ A+ L E L D V +T L+
Sbjct: 474 SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLM 533
Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA---LNFFLEKTDK 463
D K G M + + KEML + P++ T + L++G +G + + LN+ L K
Sbjct: 534 DAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG-- 591
Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
+PN + ++++ C + A+ ++ DM S + PD TY +++G +A+
Sbjct: 592 -----IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARN 646
Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
M + L +M G V+++G+
Sbjct: 647 MKEAWFLFQEMKGKGFSVSVSTYSVLIKGF 676
Score = 237 bits (605), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 136/476 (28%), Positives = 241/476 (50%), Gaps = 18/476 (3%)
Query: 93 GLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLI-----DCCCGQGDVMKALNLFDEMID 147
GL+++ + +E+M+ GLV V + V + DC A+ +F E +
Sbjct: 189 GLLREAR-----RVFEKMLNYGLVLSVDSCNVYLTRLSKDCY----KTATAIIVFREFPE 239
Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
G+ V Y I+IH +C ++ EA + M G P++ +Y+ +++GYC+ ++++
Sbjct: 240 VGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDK 299
Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
+ M L+PN +G ++ LC++ +L A F M + G+ P+ VY LID
Sbjct: 300 VWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLID 359
Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
G CK G++ A EM +I+PDV TY +I G C +G + A L +M+ +G+
Sbjct: 360 GFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEP 419
Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
+ VT+ LI+GYCK G M+ A V + M + G PNVVT+++LIDG CK G++D+A L
Sbjct: 420 DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL 479
Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
EM L P++ + ++++GL K GN++E ++L E A + T ++L+ K+
Sbjct: 480 HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 539
Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
G + A E G P V + ++ C G + KL + M + + P+
Sbjct: 540 GEMDKAQEILKEML----GKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 595
Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
T+ ++++ + + DM G+ PD + +V+G+ + ++K A+
Sbjct: 596 ATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAW 651
Score = 219 bits (557), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 137/485 (28%), Positives = 242/485 (49%), Gaps = 10/485 (2%)
Query: 84 IQACNALLNGLIKKGKF---DSVWEFYEEMVLC--GLVADVVTYGVLIDCCCGQGDVMKA 138
++ +L++ ++ K DS +F++ +V +D + V G + +A
Sbjct: 135 LKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREA 194
Query: 139 LNLFDEMIDKGIEPTVVIYTILIHGLCNE-NKMVEAESMFRSMRECGVVPNLYTYNALMD 197
+F++M++ G+ +V + + L + K A +FR E GV N+ +YN ++
Sbjct: 195 RRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIH 254
Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
C++ + A M P+V+++ +++G C+ GEL M + G+ P
Sbjct: 255 FVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKP 314
Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
N ++Y +I C+ L EA SEM + I PD Y LI G C G + A
Sbjct: 315 NSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFF 374
Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
+M+ I +V+TY ++I G+C+ GDM +A + +M KG+EP+ VTF+ LI+G CKA
Sbjct: 375 YEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKA 434
Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
G++ A ++ M+ P+VV +T LIDGL K+G++ L EM + + P++FT
Sbjct: 435 GHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTY 494
Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
+S+++GL K+G I A+ E + + + V Y ++ A C G++ KA ++
Sbjct: 495 NSIVNGLCKSGNIEEAVKLVGE----FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILK 550
Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
+M L+P T+ ++ G + D LL M+ GI P+A +V+ Y
Sbjct: 551 EMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRN 610
Query: 558 DLKSA 562
+LK+A
Sbjct: 611 NLKAA 615
Score = 170 bits (430), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/368 (29%), Positives = 188/368 (51%), Gaps = 8/368 (2%)
Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK-VGELRAAGNFFVHMAKFGVFPNIFVYN 263
+ A + +ML++ L +V + V + L K + A F + GV N+ YN
Sbjct: 191 LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYN 250
Query: 264 CLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE 323
+I C+ G + EA L ME +PDV +Y+ ++ G C G+L+ L++ M ++
Sbjct: 251 IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 310
Query: 324 GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA 383
G+ N Y S+I C+ + +A S+M +G+ P+ V +++LIDG CK G+I AA
Sbjct: 311 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 370
Query: 384 MGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHG 443
+ EM + + PDV+ +TA+I G + G+M E +L+ EM + P T + LI+G
Sbjct: 371 SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELING 430
Query: 444 LFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDN 503
K G + +A F G CSPN V Y +I LC +G + A++L +M
Sbjct: 431 YCKAGHMKDA---FRVHNHMIQAG-CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 504 LRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
L+P+ TY +++ GL ++ + + + L+ + G+ D V ++ Y ++G++ A
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA- 545
Query: 564 RCSEFLKE 571
E LKE
Sbjct: 546 --QEILKE 551
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 99/410 (24%), Positives = 183/410 (44%), Gaps = 26/410 (6%)
Query: 158 TILIHGLCNENKMVEAESMFRSMR--ECGVVPNLYTYNALMDGYCKVADVNRALEFYHEM 215
T +H + N K+ AE + RS++ EC + + LM C D L+F+ +
Sbjct: 56 TEFVHQITNVIKLRRAEPLRRSLKPYECKFKTDHLIW-VLMKIKC---DYRLVLDFF-DW 110
Query: 216 LHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNL 275
N+ + +++ +L+ A + ++ F P + V + +
Sbjct: 111 ARSRRDSNLESLCIVIHLAVASKDLKVAQSL---ISSFWERPKLNVTDSFV-------QF 160
Query: 276 FEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
F+ L + + P VF ++ + L G L A + +KM G++ +V + N
Sbjct: 161 FDL--LVYTYKDWGSDPRVF--DVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVY 216
Query: 336 IDGYCKE-GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
+ K+ A+ V + E GV NV +++ +I C+ G I A L M +K
Sbjct: 217 LTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKG 276
Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
PDV+ ++ +++G + G + + +L + M + P+ + S+I L + +++ A
Sbjct: 277 YTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAE 336
Query: 455 NFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
F E + P+ V+Y +I C G I ASK F +M S ++ PD TYT +
Sbjct: 337 EAFSEMIRQG----ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAI 392
Query: 515 LRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
+ G + M++ L +M G+ PD+V ++ GY + G +K AFR
Sbjct: 393 ISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFR 442
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 266 bits (679), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 159/516 (30%), Positives = 268/516 (51%), Gaps = 6/516 (1%)
Query: 77 KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVM 136
K LP+I N LL+ + K KFD V E+M +V + TY +LI+C C + +
Sbjct: 78 KSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQIS 137
Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
AL L +M+ G EP++V + L++G C+ ++ +A ++ M E G P+ T+ L+
Sbjct: 138 LALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLI 197
Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
G + A+ M+ QPN+VT+GV+++GLCK G+ A N M +
Sbjct: 198 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIE 257
Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
++ ++N +ID CK ++ +A++L EME I P+V TY+ LI LC G+ A L
Sbjct: 258 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 317
Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
L M ++ I N+VT+N+LID + KEG +A + M ++ ++P++ T++SL++G C
Sbjct: 318 LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCM 377
Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
+D A ++ MV K PDVV + LI G K +++ L++EM + T
Sbjct: 378 HDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT 437
Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
++LI GLF +G NA F + +DG P+ + Y+ ++ LC +G++ KA ++F
Sbjct: 438 YTTLIQGLFHDGDCDNAQKVFKQMV--SDG--VPPDIMTYSILLDGLCNNGKLEKALEVF 493
Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
M+ ++ D YTTM+ G+ +A ++ D L + G+ P+ V M+ G
Sbjct: 494 DYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSK 553
Query: 557 GDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGHLK 592
L+ A+ + +KE G G HL+
Sbjct: 554 RLLQEAYALLKKMKED--GPLPNSGTYNTLIRAHLR 587
Score = 227 bits (579), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 134/440 (30%), Positives = 224/440 (50%), Gaps = 10/440 (2%)
Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
A+ LF M+ P++V + L+ + K S+ M+ +V LYTYN L++
Sbjct: 69 AIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILIN 128
Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
+C+ + ++ AL +M+ +P++VT L++G C + A M + G P
Sbjct: 129 CFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP 188
Query: 258 NIFVYNCLIDG---HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
+ + LI G H KA EA++L M + P++ TY +++ GLC G + A
Sbjct: 189 DTITFTTLIHGLFLHNKAS---EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245
Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
LL KM I A+VV +N++ID CK ++ AL++ +M KG+ PNVVT+SSLI
Sbjct: 246 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 305
Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
C G A L ++M+ K + P++V F ALID K+G E +LY +M++ I P +
Sbjct: 306 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 365
Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
FT +SL++G + R+ A F K C P+ V Y +I+ C ++ ++
Sbjct: 366 FTYNSLVNGFCMHDRLDKAKQMFEFMVSKD----CFPDVVTYNTLIKGFCKSKRVEDGTE 421
Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
LF +M L D TYTT+++GL + + M+ G+ PD + +++ G
Sbjct: 422 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 481
Query: 555 ENGDLKSAFRCSEFLKESRI 574
NG L+ A +++++S I
Sbjct: 482 NNGKLEKALEVFDYMQKSEI 501
Score = 194 bits (492), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 111/404 (27%), Positives = 210/404 (51%), Gaps = 5/404 (1%)
Query: 159 ILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
IL +GL ++ K+ +A +F M + +P++ +N L+ K+ + + +M
Sbjct: 56 ILRNGL-HDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRL 114
Query: 219 NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
+ + T+ +L++ C+ ++ A M K G P+I + L++G+C + +A
Sbjct: 115 EIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174
Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
++L +M + PD T+ LI GL + A L+ +M + G N+VTY +++G
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234
Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
CK GD + AL++ ++M +E +VV F+++ID CK ++D A+ L+ EM K + P+
Sbjct: 235 LCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 294
Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
VV +++LI L G + +L +M+E KI P++ T ++LI K G+ A +
Sbjct: 295 VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYD 354
Query: 459 EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
+ ++ P+ Y +++ C ++ KA ++F M S + PD TY T+++G
Sbjct: 355 DMIKRS----IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGF 410
Query: 519 LRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
++KR+ D L +M G+V D V +++G +GD +A
Sbjct: 411 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNA 454
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 123/255 (48%), Gaps = 5/255 (1%)
Query: 51 NPSVFS--TLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWE 105
+P +F+ +L+ F +++A ++ + + P + N L+ G K + + E
Sbjct: 362 DPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTE 421
Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
+ EM GLV D VTY LI GD A +F +M+ G+ P ++ Y+IL+ GLC
Sbjct: 422 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 481
Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
N K+ +A +F M++ + ++Y Y +++G CK V+ + + + ++PNVV
Sbjct: 482 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 541
Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
T+ ++ GLC L+ A M + G PN YN LI H + G+ + L EM
Sbjct: 542 TYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Query: 286 EKFEISPDVFTYNIL 300
D T ++
Sbjct: 602 RSCRFVGDASTIGLV 616
Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 90/184 (48%), Gaps = 3/184 (1%)
Query: 54 VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
++TLI G + A V++++ V P I + LL+GL GK + E ++ M
Sbjct: 437 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 496
Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
+ D+ Y +I+ C G V +LF + KG++P VV Y +I GLC++ +
Sbjct: 497 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 556
Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
EA ++ + M+E G +PN TYN L+ + + D + E EM + T G++
Sbjct: 557 QEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLV 616
Query: 231 MDGL 234
+ L
Sbjct: 617 ANML 620
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 265 bits (678), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 161/558 (28%), Positives = 277/558 (49%), Gaps = 19/558 (3%)
Query: 52 PSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEF 106
P+V F+ L A ++ E L + +++E + +I + ++N + K +
Sbjct: 86 PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFST 145
Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
+++ G D V + L++ C + V +AL L D M++ G +PT++ L++GLC
Sbjct: 146 MGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCL 205
Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
K+ +A + M E G PN TY +++ CK A+E +M N++ + V
Sbjct: 206 NGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
+ +++DGLCK G L A N F M G +I YN LI G C AG + L +M
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325
Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
K +ISP+V T+++LI G+L A+ LL++M + GI N +TYNSLIDG+CKE +E
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLE 385
Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
+A+ + M KG +P+++TF+ LI+G CKA ID + L+ EM ++ ++ + V + L+
Sbjct: 386 EAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLV 445
Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
G + G ++ +L++EM+ ++ P + + L+ GL NG + AL F K +
Sbjct: 446 QGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIF----GKIEK 501
Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
+ +Y II +C ++ A LF + ++ D Y M+ L R +
Sbjct: 502 SKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSK 561
Query: 527 VMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSE-------- 578
+L M + G PD + +++R + + D +A E +K S +
Sbjct: 562 ADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVIN 621
Query: 579 --TEGHTTRSFLGHLKPT 594
+ G +SFL L T
Sbjct: 622 MLSSGELDKSFLDMLSTT 639
Score = 240 bits (612), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 139/470 (29%), Positives = 240/470 (51%), Gaps = 4/470 (0%)
Query: 81 LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
LP + N L + + K +++ V ++M G+ + T ++I+C C + A +
Sbjct: 85 LPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFS 144
Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
+++ G EP VI+ L++GLC E ++ EA + M E G P L T N L++G C
Sbjct: 145 TMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLC 204
Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
V+ A+ M+ QPN VT+G +++ +CK G+ A M + + +
Sbjct: 205 LNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAV 264
Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
Y+ +IDG CK G+L A +L +EME D+ TYN LI G C G+ + LL+ M
Sbjct: 265 KYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDM 324
Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
K I NVVT++ LID + KEG + +A + +M ++G+ PN +T++SLIDG CK +
Sbjct: 325 IKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRL 384
Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
+ A+ + M+ K PD++ F LI+G K + + L L++EM + + T ++L
Sbjct: 385 EEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTL 444
Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
+ G ++G++ A F E + P+ V Y ++ LC +G++ KA ++F +
Sbjct: 445 VQGFCQSGKLEVAKKLFQEMVSRR----VRPDIVSYKILLDGLCDNGELEKALEIFGKIE 500
Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
+ D Y ++ G+ A ++ D L + G+ DA +M+
Sbjct: 501 KSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMI 550
Score = 217 bits (552), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 127/420 (30%), Positives = 207/420 (49%), Gaps = 4/420 (0%)
Query: 99 KFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYT 158
K D + + +M+ + V+ + L L L +M KGI ++ +
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 159 ILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
I+I+ C K+ A S + + G P+ +N L++G C V+ ALE M+
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 219 NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
+P ++T L++GLC G++ A M + G PN Y +++ CK+G A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
M L +ME+ I D Y+I+I GLC G L+ A L +M +G A+++TYN+LI G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307
Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
+C G + + M ++ + PNVVTFS LID K G + A L EM+ + + P+
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN 367
Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
+ + +LIDG K+ ++E +++ M+ P + T + LI+G K RI + L F
Sbjct: 368 TITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFR 427
Query: 459 EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
E + + N V Y ++Q C G++ A KLF +M S +RPD +Y +L GL
Sbjct: 428 EMSLRG----VIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGL 483
Score = 203 bits (517), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 115/426 (26%), Positives = 217/426 (50%), Gaps = 4/426 (0%)
Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
A++LF +MI PTV+ + L + + ++ + M G+ ++YT + +++
Sbjct: 72 AVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMIN 131
Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
+C+ ++ A +++ +P+ V F L++GLC + A M + G P
Sbjct: 132 CFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKP 191
Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
+ N L++G C G + +A+ L M + P+ TY ++ +C GQ A LL
Sbjct: 192 TLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELL 251
Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
+KM + I + V Y+ +IDG CK+G ++ A ++ ++M KG + +++T+++LI G C A
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNA 311
Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
G D L +M+ + + P+VV F+ LID K+G ++E +L KEM++ I P+ T
Sbjct: 312 GRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITY 371
Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
+SLI G K R+ A+ D C P+ + + +I C +I +LF
Sbjct: 372 NSLIDGFCKENRLEEAIQM----VDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFR 427
Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
+M + + TY T+++G ++ ++ L +M+ + PD V ++++ G +NG
Sbjct: 428 EMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNG 487
Query: 558 DLKSAF 563
+L+ A
Sbjct: 488 ELEKAL 493
Score = 196 bits (498), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 114/398 (28%), Positives = 195/398 (48%), Gaps = 5/398 (1%)
Query: 51 NPSVFSTLIIAFSEMGHIEEALWVYRKIE----VLPAIQACNALLNGLIKKGKFDSVWEF 106
N + ++ + G A+ + RK+E L A++ + +++GL K G D+ +
Sbjct: 227 NEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKY-SIIIDGLCKDGSLDNAFNL 285
Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
+ EM + G AD++TY LI C G L +MI + I P VV +++LI
Sbjct: 286 FNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVK 345
Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
E K+ EA+ + + M + G+ PN TYN+L+DG+CK + A++ M+ P+++T
Sbjct: 346 EGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMT 405
Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
F +L++G CK + F M+ GV N YN L+ G C++G L A L EM
Sbjct: 406 FNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMV 465
Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
+ PD+ +Y IL+ GLC G+LE A + K+ K + ++ Y +I G C ++
Sbjct: 466 SRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVD 525
Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
A + + KGV+ + ++ +I C+ ++ A L+ +M + PD + + LI
Sbjct: 526 DAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILI 585
Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
D + L +EM + V TV +I+ L
Sbjct: 586 RAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINML 623
Score = 186 bits (471), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 107/406 (26%), Positives = 199/406 (49%), Gaps = 4/406 (0%)
Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
K +A +FR M + +P + +N L K L +M + ++ T
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
++++ C+ +L A + + K G P+ ++N L++G C + EA+ L M +
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
P + T N L+ GLC G++ A L+ +M + G N VTY +++ CK G A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
+ + +M E+ ++ + V +S +IDG CK G++D A L+ EM IK D++ + LI G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307
Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
G + +L ++M++ KI+P+V T S LI K G++ A E +
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRG---- 363
Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
+PN + Y ++I C + ++ +A ++ M S PD T+ ++ G +A R+ D +
Sbjct: 364 IAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGL 423
Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
L +M G++ + V +V+G+ ++G L+ A + + + R+
Sbjct: 424 ELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRV 469
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 265 bits (678), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 154/495 (31%), Positives = 264/495 (53%), Gaps = 4/495 (0%)
Query: 77 KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVM 136
K LP+I N LL+ + K KFD V E+M G+ ++ TY +LI+C C + +
Sbjct: 3 KSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQIS 62
Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
AL L +M+ G EP++V + L++G C+ ++ +A ++ M E G P+ T+ L+
Sbjct: 63 LALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLI 122
Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
G + A+ M+ QPN+VT+GV+++GLCK G++ A N M +
Sbjct: 123 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE 182
Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
++ ++N +ID CK ++ +A++L EME I P+V TY+ LI LC G+ A L
Sbjct: 183 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 242
Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
L M ++ I N+VT+N+LID + KEG +A + M ++ ++P++ T++SLI+G C
Sbjct: 243 LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCM 302
Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
+D A ++ MV K PD+ + LI G K +++ L++EM + T
Sbjct: 303 HDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT 362
Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
++LI GLF +G NA F + +DG P+ + Y+ ++ LC +G++ KA ++F
Sbjct: 363 YTTLIQGLFHDGDCDNAQKVFKQMV--SDG--VPPDIMTYSILLDGLCNNGKLEKALEVF 418
Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
M+ ++ D YTTM+ G+ +A ++ D L + G+ P+ V M+ G
Sbjct: 419 DYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSK 478
Query: 557 GDLKSAFRCSEFLKE 571
L+ A+ + +KE
Sbjct: 479 RLLQEAYALLKKMKE 493
Score = 222 bits (566), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 129/426 (30%), Positives = 218/426 (51%), Gaps = 10/426 (2%)
Query: 152 PTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
P++ + L+ + K S+ M+ G+ NLYTYN L++ +C+ + ++ AL
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDG--- 268
+M+ +P++VT L++G C + A M + G P+ + LI G
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 269 HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILAN 328
H KA EA++L M + P++ TY +++ GLC G ++ A LL KM I A+
Sbjct: 128 HNKAS---EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEAD 184
Query: 329 VVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYT 388
VV +N++ID CK ++ AL++ +M KG+ PNVVT+SSLI C G A L +
Sbjct: 185 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 244
Query: 389 EMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
+M+ K + P++V F ALID K+G E +L+ +M++ I P +FT +SLI+G +
Sbjct: 245 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHD 304
Query: 449 RISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDN 508
R+ A F K C P+ Y +I+ C ++ ++LF +M L D
Sbjct: 305 RLDKAKQMFEFMVSKD----CFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 360
Query: 509 CTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEF 568
TYTT+++GL + + M+ G+ PD + +++ G NG L+ A ++
Sbjct: 361 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY 420
Query: 569 LKESRI 574
+++S I
Sbjct: 421 MQKSEI 426
Score = 221 bits (562), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 126/398 (31%), Positives = 204/398 (51%), Gaps = 3/398 (0%)
Query: 54 VFSTLIIAFSEMGHIEEAL-WVYRKIE--VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
F+TLI EA+ V R ++ P + ++NGL K+G D + +M
Sbjct: 117 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 176
Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
+ ADVV + +ID C V ALNLF EM KGI P VV Y+ LI LC+ +
Sbjct: 177 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 236
Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
+A + M E + PNL T+NAL+D + K A + + +M+ ++ P++ T+ L
Sbjct: 237 SDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSL 296
Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
++G C L A F M FP++ YN LI G CK+ + + L EM +
Sbjct: 297 INGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGL 356
Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
D TY LI+GL G + A+ + ++M +G+ +++TY+ L+DG C G +EKAL
Sbjct: 357 VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALE 416
Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
V M + ++ ++ ++++I+G CKAG +D L+ + +K + P+VV + +I GL
Sbjct: 417 VFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLC 476
Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
++E L K+M E P T ++LI ++G
Sbjct: 477 SKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDG 514
Score = 196 bits (497), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 115/408 (28%), Positives = 198/408 (48%), Gaps = 6/408 (1%)
Query: 51 NPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQA----CNALLNGLIKKGKFDSVWEF 106
N + ++ + G I+ A + K+E I+A N +++ L K D
Sbjct: 149 NLVTYGVVVNGLCKRGDIDLAFNLLNKMEA-AKIEADVVIFNTIIDSLCKYRHVDDALNL 207
Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
++EM G+ +VVTY LI C C G A L +MI+K I P +V + LI
Sbjct: 208 FKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK 267
Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
E K VEAE + M + + P+++TYN+L++G+C +++A + + M+ + P++ T
Sbjct: 268 EGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDT 327
Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
+ L+ G CK + F M+ G+ + Y LI G G+ A + +M
Sbjct: 328 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 387
Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
+ PD+ TY+IL+ GLC G+LE A + M K I ++ Y ++I+G CK G ++
Sbjct: 388 SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVD 447
Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
+ ++ KGV+PNVVT++++I G C + A L +M +PD + LI
Sbjct: 448 DGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLI 507
Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
+DG+ + L +EM + T+ L+ + +GR+ +
Sbjct: 508 RAHLRDGDKAASAELIREMRSCRFVGDASTI-GLVANMLHDGRLDKSF 554
Score = 160 bits (404), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 100/320 (31%), Positives = 161/320 (50%), Gaps = 4/320 (1%)
Query: 250 MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQ 309
M K P+IF +N L+ K +SL +M++ IS +++TYNILI C Q
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 310 LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
+ A LL KM K G ++VT +SL++GYC + A+++ QM E G P+ +TF++
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
LI G A+ L MV + P++V + +++GL K G++ L +M AK
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
I V +++I L K + +ALN F E K PN V Y+++I LC G+
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG----IRPNVVTYSSLISCLCSYGRW 236
Query: 490 LKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
AS+L SDM + P+ T+ ++ ++ + ++ L DMIK I PD +
Sbjct: 237 SDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSL 296
Query: 550 VRGYQENGDLKSAFRCSEFL 569
+ G+ + L A + EF+
Sbjct: 297 INGFCMHDRLDKAKQMFEFM 316
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 265 bits (676), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 161/525 (30%), Positives = 266/525 (50%), Gaps = 9/525 (1%)
Query: 52 PSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEF 106
P+V FS L A ++ + L + +++E + + + ++N + K +
Sbjct: 86 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 145
Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
+++ G + +T+ LI+ C +G V +AL L D M++ G +P ++ L++GLC
Sbjct: 146 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL 205
Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
K EA + M E G PN TY +++ CK A+E +M N++ + V
Sbjct: 206 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
+ +++DGLCK G L A N F M G+ NI YN LI G C AG + L +M
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
K +I+P+V T+++LI G+L AE L ++M GI + +TY SLIDG+CKE ++
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 385
Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
KA + M KG +PN+ TF+ LI+G CKA ID + L+ +M ++ +V D V + LI
Sbjct: 386 KANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLI 445
Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
G + G + L++EM+ K+ P++ T L+ GL NG AL F EK +K+
Sbjct: 446 QGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIF-EKIEKSK- 503
Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
+ +Y II +C ++ A LF + ++P TY M+ GL + + +
Sbjct: 504 --MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSE 561
Query: 527 VMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
+L M + G PD +++R + +GD + + E LK
Sbjct: 562 AELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKR 606
Score = 246 bits (627), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 146/497 (29%), Positives = 254/497 (51%), Gaps = 7/497 (1%)
Query: 69 EEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVL 125
++A+ ++R + LP + + L + + K ++D V ++M L G+ ++ T ++
Sbjct: 70 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 129
Query: 126 IDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGV 185
I+C C + A + ++I G EP + ++ LI+GLC E ++ EA + M E G
Sbjct: 130 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 189
Query: 186 VPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGN 245
P+L T N L++G C A+ +M+ + QPN VT+G +++ +CK G+ A
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAME 249
Query: 246 FFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
M + + + Y+ +IDG CK G+L A +L +EME I+ ++ TYNILI G C
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFC 309
Query: 306 GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVV 365
G+ + LL+ M K I NVVT++ LID + KEG + +A + +M +G+ P+ +
Sbjct: 310 NAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTI 369
Query: 366 TFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEM 425
T++SLIDG CK ++D A + MV K P++ F LI+G K + + L L+++M
Sbjct: 370 TYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKM 429
Query: 426 LEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCY 485
+ T ++LI G + G+++ A F E + PN V Y ++ LC
Sbjct: 430 SLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK----VPPNIVTYKILLDGLCD 485
Query: 486 DGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
+G+ KA ++F + + D Y ++ G+ A ++ D L + G+ P
Sbjct: 486 NGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKT 545
Query: 546 NQVMVRGYQENGDLKSA 562
+M+ G + G L A
Sbjct: 546 YNIMIGGLCKKGPLSEA 562
Score = 212 bits (539), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 124/437 (28%), Positives = 220/437 (50%), Gaps = 4/437 (0%)
Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
A++LF +MI PTV+ ++ L + + ++ + M G+ NLYT + +++
Sbjct: 72 AIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMIN 131
Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
+C+ + A +++ +PN +TF L++GLC G + A M + G P
Sbjct: 132 CFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKP 191
Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
++ N L++G C +G EAM L +M ++ P+ TY ++ +C GQ A LL
Sbjct: 192 DLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELL 251
Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
+KM + I + V Y+ +IDG CK G ++ A ++ ++M KG+ N++T++ LI G C A
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNA 311
Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
G D L +M+ + + P+VV F+ LID K+G ++E L+KEM+ I P T
Sbjct: 312 GRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITY 371
Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
+SLI G K N L+ + D C PN + +I C +I +LF
Sbjct: 372 TSLIDGFCK----ENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR 427
Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
M + D TY T+++G ++ L +M+ + P+ V ++++ G +NG
Sbjct: 428 KMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNG 487
Query: 558 DLKSAFRCSEFLKESRI 574
+ + A E +++S++
Sbjct: 488 ESEKALEIFEKIEKSKM 504
Score = 209 bits (531), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 127/420 (30%), Positives = 208/420 (49%), Gaps = 4/420 (0%)
Query: 99 KFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYT 158
K D + + +M+ + V+ + L L L +M KGI + +
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 159 ILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
I+I+ C K+ A S + + G PN T++ L++G C V+ ALE M+
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 219 NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
+P+++T L++GLC G+ A M ++G PN Y +++ CK+G A
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247
Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
M L +ME+ I D Y+I+I GLC G L+ A L +M +GI N++TYN LI G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307
Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
+C G + + M ++ + PNVVTFS LID K G + A L+ EM+ + + PD
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD 367
Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
+ +T+LIDG K+ ++ + ++ M+ P++ T + LI+G K RI + L F
Sbjct: 368 TITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR 427
Query: 459 EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
+ + + + V Y +IQ C G++ A +LF +M S + P+ TY +L GL
Sbjct: 428 KMSLRG----VVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGL 483
Score = 202 bits (513), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 117/408 (28%), Positives = 204/408 (50%), Gaps = 6/408 (1%)
Query: 51 NPSVFSTLIIAFSEMGHIEEALWVYRKIE----VLPAIQACNALLNGLIKKGKFDSVWEF 106
N + ++ + G A+ + RK+E L A++ + +++GL K G D+ +
Sbjct: 227 NAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKY-SIIIDGLCKHGSLDNAFNL 285
Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
+ EM + G+ +++TY +LI C G L +MI + I P VV +++LI
Sbjct: 286 FNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVK 345
Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
E K+ EAE + + M G+ P+ TY +L+DG+CK +++A + M+ PN+ T
Sbjct: 346 EGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRT 405
Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
F +L++G CK + F M+ GV + YN LI G C+ G L A L EM
Sbjct: 406 FNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMV 465
Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
++ P++ TY IL+ GLC G+ E A + +K+ K + ++ YN +I G C ++
Sbjct: 466 SRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVD 525
Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
A + + KGV+P V T++ +I G CK G + A L+ +M PD + LI
Sbjct: 526 DAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILI 585
Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
DG+ ++++L +E+ + T+ +I + +GR+ +
Sbjct: 586 RAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVID-MLSDGRLKKSF 632
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 264 bits (675), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 135/436 (30%), Positives = 242/436 (55%), Gaps = 4/436 (0%)
Query: 77 KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVM 136
K P+I N LL+ ++K K+D V ++M + G+ D+ T+ ++I+C C V
Sbjct: 78 KSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVS 137
Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
AL++ +M+ G EP V L++G C N++ +A S+ M E G P++ YNA++
Sbjct: 138 LALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAII 197
Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
D CK VN A +F+ E+ ++PNVVT+ L++GLC A M K +
Sbjct: 198 DSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKIT 257
Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
PN+ Y+ L+D K G + EA L EM + I PD+ TY+ LI GLC +++ A +
Sbjct: 258 PNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQM 317
Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
M +G LA+VV+YN+LI+G+CK +E + + +M+++G+ N VT+++LI G +
Sbjct: 318 FDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQ 377
Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
AG++D A +++M + PD+ + L+ GL +G +++ L ++++M + ++ + T
Sbjct: 378 AGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVT 437
Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
+++I G+ K G++ A + F + K P+ V Y ++ LC G + + L+
Sbjct: 438 YTTVIRGMCKTGKVEEAWSLFCSLSLKG----LKPDIVTYTTMMSGLCTKGLLHEVEALY 493
Query: 497 SDMRSDNLRPDNCTYT 512
+ M+ + L ++CT +
Sbjct: 494 TKMKQEGLMKNDCTLS 509
Score = 226 bits (576), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 128/420 (30%), Positives = 220/420 (52%), Gaps = 4/420 (0%)
Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
A++LF +M+ P++V + L+ + K S+ + M G+ +LYT+N +++
Sbjct: 69 AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128
Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
+C V+ AL +ML +P+ VT G L++G C+ + A + M + G P
Sbjct: 129 CFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKP 188
Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
+I YN +ID CK + +A E+E+ I P+V TY L+ GLC + A LL
Sbjct: 189 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLL 248
Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
M K+ I NV+TY++L+D + K G + +A + +M ++P++VT+SSLI+G C
Sbjct: 249 SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLH 308
Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
ID A ++ MV K + DVV + LI+G K +++ ++L++EM + + + T
Sbjct: 309 DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTY 368
Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
++LI G F+ G + A FF + D SP+ Y ++ LC +G++ KA +F
Sbjct: 369 NTLIQGFFQAGDVDKAQEFF----SQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFE 424
Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
DM+ + D TYTT++RG+ + ++ + L + G+ PD V M+ G G
Sbjct: 425 DMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKG 484
Score = 193 bits (490), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 179/324 (55%), Gaps = 5/324 (1%)
Query: 50 FNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVW 104
+ P + ++ +I + + + +A +++IE + P + AL+NGL ++
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
+M+ + +V+TY L+D G V++A LF+EM+ I+P +V Y+ LI+GL
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305
Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
C +++ EA MF M G + ++ +YN L++G+CK V ++ + EM L N
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365
Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
VT+ L+ G + G++ A FF M FG+ P+I+ YN L+ G C G L +A+ + +
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 425
Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
M+K E+ D+ TY +I+G+C G++E A L + +G+ ++VTY +++ G C +G
Sbjct: 426 MQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGL 485
Query: 345 MEKALSVCSQMTEKGVEPNVVTFS 368
+ + ++ ++M ++G+ N T S
Sbjct: 486 LHEVEALYTKMKQEGLMKNDCTLS 509
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 103/324 (31%), Positives = 175/324 (54%), Gaps = 4/324 (1%)
Query: 239 ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYN 298
+L A + F M K FP+I +N L+ K +SL +ME I D++T+N
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK 358
I+I C Q+ A +L KM K G + VT SL++G+C+ + A+S+ +M E
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
G +P++V ++++ID CK ++ A + E+ K + P+VV +TAL++GL +
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
RL +M++ KITP+V T S+L+ KNG++ A F E + P+ V Y++
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMS----IDPDIVTYSS 300
Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
+I LC +I +A+++F M S D +Y T++ G +AKR+ D M L +M + G
Sbjct: 301 LINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 360
Query: 539 IVPDAVINQVMVRGYQENGDLKSA 562
+V + V +++G+ + GD+ A
Sbjct: 361 LVSNTVTYNTLIQGFFQAGDVDKA 384
Score = 175 bits (444), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 178/359 (49%), Gaps = 4/359 (1%)
Query: 205 VNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
+N A++ + +M+ P++V F L+ + K+ + + M G+ +++ +N
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 265 LIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEG 324
+I+ C + A+S+ +M K PD T L+ G C ++ A L+ KM + G
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 325 ILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAM 384
++V YN++ID CK + A ++ KG+ PNVVT+++L++G C + A
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 385 GLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
L ++M+ K + P+V+ ++AL+D K+G + E L++EM+ I P + T SSLI+GL
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305
Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNL 504
+ RI A F D C + V Y +I C ++ KLF +M L
Sbjct: 306 CLHDRIDEANQMF----DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361
Query: 505 RPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
+ TY T+++G +A + + M GI PD +++ G +NG+L+ A
Sbjct: 362 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKAL 420
Score = 38.9 bits (89), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/132 (21%), Positives = 54/132 (40%), Gaps = 30/132 (22%)
Query: 54 VFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
++ L+ + G +E+AL ++ +K E+ I ++ G+ K GK + W + +
Sbjct: 402 TYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSL 461
Query: 111 VLCGLVADVVTYGVLI---------------------------DCCCGQGDVMKALNLFD 143
L GL D+VTY ++ DC GD+ + L
Sbjct: 462 SLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIK 521
Query: 144 EMIDKGIEPTVV 155
+M+ G P+++
Sbjct: 522 KMLSCGYAPSLL 533
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 263 bits (673), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 159/514 (30%), Positives = 268/514 (52%), Gaps = 9/514 (1%)
Query: 56 STLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVL 112
+ LI + +G +E A VY++I V + N ++N L K GK + V F ++
Sbjct: 204 NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQE 263
Query: 113 CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVE 172
G+ D+VTY LI +G + +A L + M KG P V Y +I+GLC K
Sbjct: 264 KGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYER 323
Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMD 232
A+ +F M G+ P+ TY +L+ CK DV + + +M ++ P++V F +M
Sbjct: 324 AKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMS 383
Query: 233 GLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISP 292
+ G L A +F + + G+ P+ +Y LI G+C+ G + AM+L +EM + +
Sbjct: 384 LFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAM 443
Query: 293 DVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVC 352
DV TYN ++ GLC L A+ L +M + + + T LIDG+CK G+++ A+ +
Sbjct: 444 DVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELF 503
Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
+M EK + +VVT+++L+DG K G+ID A ++ +MV K ++P + ++ L++ L
Sbjct: 504 QKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSK 563
Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPN 472
G++ E R++ EM+ I P+V +S+I G ++G S+ + FLEK G+ P+
Sbjct: 564 GHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGES-FLEKM--ISEGFV-PD 619
Query: 473 HVLYAAIIQALCYDGQILKASKLFSDMRSDN--LRPDNCTYTTMLRGLLRAKRMLDVMML 530
+ Y +I + + KA L M + L PD TY ++L G R +M + ++
Sbjct: 620 CISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVV 679
Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
L MI+ G+ PD M+ G+ +L AFR
Sbjct: 680 LRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFR 713
Score = 225 bits (574), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 207/387 (53%), Gaps = 5/387 (1%)
Query: 51 NPSVFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
+ + + +L++ + G + E V+ R +V+P + +++++ + G D ++
Sbjct: 339 DSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYF 398
Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
+ GL+ D V Y +LI C +G + A+NL +EM+ +G VV Y ++HGLC
Sbjct: 399 NSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKR 458
Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
+ EA+ +F M E + P+ YT L+DG+CK+ ++ A+E + +M ++ +VVT+
Sbjct: 459 KMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTY 518
Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
L+DG KVG++ A + M + P Y+ L++ C G+L EA + EM
Sbjct: 519 NTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMIS 578
Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
I P V N +IKG C G E L+KM EG + + ++YN+LI G+ +E +M K
Sbjct: 579 KNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSK 638
Query: 348 ALSVCSQMTEK--GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
A + +M E+ G+ P+V T++S++ G C+ + A + +M+ + + PD +T +
Sbjct: 639 AFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCM 698
Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITP 432
I+G N+ E R++ EML+ +P
Sbjct: 699 INGFVSQDNLTEAFRIHDEMLQRGFSP 725
Score = 224 bits (570), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 141/528 (26%), Positives = 251/528 (47%), Gaps = 42/528 (7%)
Query: 51 NPSVFSTLIIAF---SEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
N SVF LI + ++ EA + R +I ACNAL+ L++ G + W Y
Sbjct: 164 NDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223
Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
+E+ G+ +V T LN I+++ LC +
Sbjct: 224 QEISRSGVGINVYT-----------------LN------------------IMVNALCKD 248
Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
KM + + ++E GV P++ TYN L+ Y + A E + M P V T+
Sbjct: 249 GKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTY 308
Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
+++GLCK G+ A F M + G+ P+ Y L+ CK G++ E + S+M
Sbjct: 309 NTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRS 368
Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
++ PD+ ++ ++ G L+ A + + G++ + V Y LI GYC++G +
Sbjct: 369 RDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISV 428
Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
A+++ ++M ++G +VVT+++++ G CK + A L+ EM ++L PD T LID
Sbjct: 429 AMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILID 488
Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGG 467
G K GN++ + L+++M E +I V T ++L+ G K G I A + + K
Sbjct: 489 GHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE--- 545
Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
P + Y+ ++ ALC G + +A +++ +M S N++P +M++G R+ D
Sbjct: 546 -ILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDG 604
Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIG 575
L MI G VPD + ++ G+ ++ AF + ++E + G
Sbjct: 605 ESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGG 652
Score = 163 bits (413), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 111/423 (26%), Positives = 203/423 (47%), Gaps = 24/423 (5%)
Query: 153 TVVIYTILIHGLCNENKMVEAES-MFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEF 211
T + + +IH L ++ +A+S + R +R GV L N+L +
Sbjct: 112 TSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGV-SRLEIVNSLDSTFS----------- 159
Query: 212 YHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCK 271
N N F +L+ + +LR A F + G +I N LI +
Sbjct: 160 -------NCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVR 212
Query: 272 AGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
G + A + E+ + + +V+T NI++ LC G++E L ++ ++G+ ++VT
Sbjct: 213 IGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVT 272
Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
YN+LI Y +G ME+A + + M KG P V T++++I+G CK G + A ++ EM+
Sbjct: 273 YNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEML 332
Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
L PD + +L+ K G++ ET +++ +M + P + SS++ ++G +
Sbjct: 333 RSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLD 392
Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
AL +F + P++V+Y +IQ C G I A L ++M D TY
Sbjct: 393 KALMYF----NSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTY 448
Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
T+L GL + K + + L +M + + PD+ +++ G+ + G+L++A + +KE
Sbjct: 449 NTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKE 508
Query: 572 SRI 574
RI
Sbjct: 509 KRI 511
Score = 160 bits (404), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 172/349 (49%), Gaps = 40/349 (11%)
Query: 55 FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
FS+++ F+ G++++AL + ++ ++P L+ G +KG EM+
Sbjct: 378 FSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEML 437
Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
G DVVTY ++ C + + +A LF+EM ++ + P TILI G C +
Sbjct: 438 QQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQ 497
Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
A +F+ M+E + ++ TYN L+DG+ KV D++ A E + +M+ + P +++ +L+
Sbjct: 498 NAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILV 557
Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN----------------- 274
+ LC G L A + M + P + + N +I G+C++GN
Sbjct: 558 NALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFV 617
Query: 275 ------------------LFEAMSLCSEMEKFE--ISPDVFTYNILIKGLCGVGQLEGAE 314
+ +A L +ME+ + + PDVFTYN ++ G C Q++ AE
Sbjct: 618 PDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAE 677
Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPN 363
+L+KM + G+ + TY +I+G+ + ++ +A + +M ++G P+
Sbjct: 678 VVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 261 bits (668), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 147/492 (29%), Positives = 262/492 (53%), Gaps = 8/492 (1%)
Query: 81 LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
LP++ + + + + +F+ V +F +++ L G+ ++ T ++I+C C A +
Sbjct: 85 LPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYS 144
Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
+ +++ G EP + LI GL E K+ EA + M E G P++ TYN++++G C
Sbjct: 145 VLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGIC 204
Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
+ D + AL+ +M N++ +V T+ ++D LC+ G + AA + F M G+ ++
Sbjct: 205 RSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVV 264
Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
YN L+ G CKAG + L +M EI P+V T+N+L+ G+L+ A L ++M
Sbjct: 265 TYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEM 324
Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
GI N++TYN+L+DGYC + + +A ++ M P++VTF+SLI G C +
Sbjct: 325 ITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRV 384
Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
D M ++ + + LV + V ++ L+ G + G +K L++EM+ + P V T L
Sbjct: 385 DDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGIL 444
Query: 441 IHGLFKNGRISNALNFF--LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
+ GL NG++ AL F L+K+ K D G V+Y II+ +C G++ A LF
Sbjct: 445 LDGLCDNGKLEKALEIFEDLQKS-KMDLGI-----VMYTTIIEGMCKGGKVEDAWNLFCS 498
Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
+ ++P+ TYT M+ GL + + + +LL M + G P+ ++R + +GD
Sbjct: 499 LPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGD 558
Query: 559 LKSAFRCSEFLK 570
L ++ + E +K
Sbjct: 559 LTASAKLIEEMK 570
Score = 247 bits (630), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 141/450 (31%), Positives = 240/450 (53%), Gaps = 7/450 (1%)
Query: 82 PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
P N L+ GL +GK + MV G DVVTY +++ C GD AL+L
Sbjct: 156 PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDL 215
Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
+M ++ ++ V Y+ +I LC + + A S+F+ M G+ ++ TYN+L+ G CK
Sbjct: 216 LRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK 275
Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
N +M+ + PNV+TF VL+D K G+L+ A + M G+ PNI
Sbjct: 276 AGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 335
Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
YN L+DG+C L EA ++ M + + SPD+ T+ LIKG C V +++ + + +
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 395
Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
K G++AN VTY+ L+ G+C+ G ++ A + +M GV P+V+T+ L+DG C G ++
Sbjct: 396 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLE 455
Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
A+ ++ ++ + +V++T +I+G+ K G +++ L+ + + P+V T + +I
Sbjct: 456 KALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 515
Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
GL K G +S A N L K ++ DG +PN Y +I+A DG + ++KL +M+S
Sbjct: 516 SGLCKKGSLSEA-NILLRKMEE-DGN--APNDCTYNTLIRAHLRDGDLTASAKLIEEMKS 571
Query: 502 DNLRPDNCTYTTMLRGLLRA---KRMLDVM 528
D + ++ LL K LD++
Sbjct: 572 CGFSADASSIKMVIDMLLSGELDKSFLDML 601
Score = 202 bits (513), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 113/403 (28%), Positives = 215/403 (53%), Gaps = 4/403 (0%)
Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
+A ++F+ M +P+L ++ + N L+F ++ + + N+ T +++
Sbjct: 71 DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130
Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
+ C+ + A + + K G P+ +N LI G G + EA+ L M +
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQ 190
Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
PDV TYN ++ G+C G A LL+KM + + A+V TY+++ID C++G ++ A+S+
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 250
Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
+M KG++ +VVT++SL+ G CKAG + L +MV + +VP+V+ F L+D K
Sbjct: 251 FKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVK 310
Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
+G ++E LYKEM+ I+P++ T ++L+ G R+S A N D CSP
Sbjct: 311 EGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML----DLMVRNKCSP 366
Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
+ V + ++I+ C ++ K+F ++ L + TY+ +++G ++ ++ L
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426
Query: 532 ADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
+M+ G++PD + +++ G +NG L+ A E L++S++
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469
Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 115/426 (26%), Positives = 209/426 (49%), Gaps = 4/426 (0%)
Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
A+ LF EMI P++V ++ + + + + G+ N+YT N +++
Sbjct: 72 AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMIN 131
Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
+C+ A +++ +P+ TF L+ GL G++ A M + G P
Sbjct: 132 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQP 191
Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
++ YN +++G C++G+ A+ L +ME+ + DVFTY+ +I LC G ++ A L
Sbjct: 192 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251
Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
++M +GI ++VVTYNSL+ G CK G + M + + PNV+TF+ L+D K
Sbjct: 252 KEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKE 311
Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
G + A LY EM+ + + P+++ + L+DG + E + M+ K +P + T
Sbjct: 312 GKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTF 371
Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
+SLI G R+ + + F + + N V Y+ ++Q C G+I A +LF
Sbjct: 372 TSLIKGYCMVKRVDDGMKVFRNISKRG----LVANAVTYSILVQGFCQSGKIKLAEELFQ 427
Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
+M S + PD TY +L GL ++ + + D+ K + V+ ++ G + G
Sbjct: 428 EMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGG 487
Query: 558 DLKSAF 563
++ A+
Sbjct: 488 KVEDAW 493
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 88/197 (44%), Gaps = 4/197 (2%)
Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
D A+ L+ EM+ +P +V F+ +++ L K++ I +++T++ +
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
I+ + + A + L K K GY P+ + +I+ L +G++ +A L M
Sbjct: 130 INCFCRCCKTCFAYSV-LGKVMKL--GY-EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 185
Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
+ +PD TY +++ G+ R+ + LL M + + D ++ +G +
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 245
Query: 561 SAFRCSEFLKESRIGSS 577
+A + ++ I SS
Sbjct: 246 AAISLFKEMETKGIKSS 262
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 260 bits (665), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 147/492 (29%), Positives = 254/492 (51%), Gaps = 7/492 (1%)
Query: 55 FSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
++ LI F + AL V K+ L P I ++LLNG + ++M
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 177
Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
+ + VT+ LI +A+ L D M+ +G +P + Y +++GLC +
Sbjct: 178 VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 237
Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
A S+ + M + + ++ Y ++D C +VN AL + EM + ++PNVVT+ L+
Sbjct: 238 LALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 297
Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
LC G A M + + PN+ ++ LID K G L EA L EM K I
Sbjct: 298 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 357
Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
PD+FTY+ LI G C +L+ A+ + + M + NVVTYN+LI G+CK +E+ + +
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 417
Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
+M+++G+ N VT+++LI G +AG+ D A ++ +MV + PD++ ++ L+DGL K
Sbjct: 418 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 477
Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
G +++ L +++ + ++K+ P ++T + +I G+ K G++ + + F + K P
Sbjct: 478 YGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG----VKP 533
Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
N ++Y +I C G +A LF +M+ D P++ TY T++R LR L+
Sbjct: 534 NVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELI 593
Query: 532 ADMIKMGIVPDA 543
+M G V DA
Sbjct: 594 KEMRSCGFVGDA 605
Score = 257 bits (657), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 147/477 (30%), Positives = 254/477 (53%), Gaps = 4/477 (0%)
Query: 81 LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
LP+I N LL+ + K KFD V E M + D+ +Y +LI+C C + + AL
Sbjct: 77 LPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALA 136
Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
+ +M+ G EP +V + L++G C+ ++ EA ++ M PN T+N L+ G
Sbjct: 137 VLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLF 196
Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
+ A+ M+ QP++ T+G +++GLCK G++ A + M K + ++
Sbjct: 197 LHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVV 256
Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
+Y +ID C N+ +A++L +EM+ I P+V TYN LI+ LC G+ A LL M
Sbjct: 257 IYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 316
Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
+ I NVVT+++LID + KEG + +A + +M ++ ++P++ T+SSLI+G C +
Sbjct: 317 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 376
Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
D A ++ M+ K P+VV + LI G K ++E + L++EM + + + T ++L
Sbjct: 377 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTL 436
Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
I GLF+ G A F K +DG P+ + Y+ ++ LC G++ KA +F ++
Sbjct: 437 IQGLFQAGDCDMAQKIF--KKMVSDG--VPPDIITYSILLDGLCKYGKLEKALVVFEYLQ 492
Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
+ PD TY M+ G+ +A ++ D L + G+ P+ +I M+ G+ G
Sbjct: 493 KSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKG 549
Score = 246 bits (629), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 134/401 (33%), Positives = 216/401 (53%), Gaps = 3/401 (0%)
Query: 51 NPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFY 107
N F+TLI EA+ + ++ P + ++NGL K+G D
Sbjct: 184 NTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLL 243
Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
++M + ADVV Y +ID C +V ALNLF EM +KGI P VV Y LI LCN
Sbjct: 244 KKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 303
Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
+ +A + M E + PN+ T++AL+D + K + A + Y EM+ ++ P++ T+
Sbjct: 304 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 363
Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
L++G C L A + F M FPN+ YN LI G CKA + E M L EM +
Sbjct: 364 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQ 423
Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
+ + TYN LI+GL G + A+ + +KM +G+ +++TY+ L+DG CK G +EK
Sbjct: 424 RGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEK 483
Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
AL V + + +EP++ T++ +I+G CKAG ++ L+ + +K + P+V+++T +I
Sbjct: 484 ALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMIS 543
Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNG 448
G + G +E L++EM E P+ T ++LI ++G
Sbjct: 544 GFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDG 584
Score = 242 bits (618), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 147/474 (31%), Positives = 240/474 (50%), Gaps = 9/474 (1%)
Query: 50 FNPSV--FSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVW 104
+ P + S+L+ + I EA+ + ++ V+ P N L++GL K
Sbjct: 146 YEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAV 205
Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
+ MV G D+ TYG +++ C +GD+ AL+L +M IE VVIYT +I L
Sbjct: 206 ALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDAL 265
Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
CN + +A ++F M G+ PN+ TYN+L+ C + A +M+ + PNV
Sbjct: 266 CNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 325
Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
VTF L+D K G+L A + M K + P+IF Y+ LI+G C L EA +
Sbjct: 326 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 385
Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
M + P+V TYN LIKG C ++E L ++M + G++ N VTYN+LI G + GD
Sbjct: 386 MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD 445
Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
+ A + +M GV P+++T+S L+DG CK G ++ A+ ++ + + PD+ +
Sbjct: 446 CDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNI 505
Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
+I+G+ K G +++ L+ + + P+V +++I G + G A F E K
Sbjct: 506 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREM--KE 563
Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
DG PN Y +I+A DG +++L +MRS D T + ++ L
Sbjct: 564 DGTL--PNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 615
Score = 231 bits (589), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 139/440 (31%), Positives = 230/440 (52%), Gaps = 10/440 (2%)
Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
A++LF EM+ P++V + L+ + NK S+ M+ + +LY+YN L++
Sbjct: 64 AVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILIN 123
Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
+C+ + + AL +M+ +P++VT L++G C + A M P
Sbjct: 124 CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQP 183
Query: 258 NIFVYNCLIDG---HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
N +N LI G H KA EA++L M PD+FTY ++ GLC G ++ A
Sbjct: 184 NTVTFNTLIHGLFLHNKAS---EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
LL+KM K I A+VV Y ++ID C ++ AL++ ++M KG+ PNVVT++SLI
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300
Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
C G A L ++M+ + + P+VV F+ALID K+G + E +LY EM++ I P +
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360
Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
FT SSLI+G + R+ A + F K C PN V Y +I+ C ++ + +
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKD----CFPNVVTYNTLIKGFCKAKRVEEGME 416
Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
LF +M L + TY T+++GL +A + M+ G+ PD + +++ G
Sbjct: 417 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLC 476
Query: 555 ENGDLKSAFRCSEFLKESRI 574
+ G L+ A E+L++S++
Sbjct: 477 KYGKLEKALVVFEYLQKSKM 496
Score = 228 bits (581), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 144/474 (30%), Positives = 232/474 (48%), Gaps = 6/474 (1%)
Query: 99 KFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYT 158
K D + + EMV + +V + L+ ++L + M + I + Y
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 159 ILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
ILI+ C +++ A ++ M + G P++ T ++L++GYC ++ A+ +M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 219 NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
QPN VTF L+ GL + A M G P++F Y +++G CK G++ A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
+SL +MEK +I DV Y +I LC + A L +M +GI NVVTYNSLI
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
C G A + S M E+ + PNVVTFS+LID K G + A LY EM+ +S+ PD
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359
Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
+ +++LI+G + E +++ M+ P+V T ++LI G K R+ + F
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419
Query: 459 EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
E + + G N V Y +IQ L G A K+F M SD + PD TY+ +L GL
Sbjct: 420 EMSQRGLVG----NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 475
Query: 519 LRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR--CSEFLK 570
+ ++ +++ + K + PD +M+ G + G ++ + CS LK
Sbjct: 476 CKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 529
Score = 41.2 bits (95), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 4/141 (2%)
Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
D + + + L+ EM++++ PS+ + L+ + K N + + ++ S
Sbjct: 58 DLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAK----MNKFDLVISLGERMQNLRISY 113
Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
+ Y +I C Q+ A + M PD T +++L G KR+ + + L+
Sbjct: 114 DLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALV 173
Query: 532 ADMIKMGIVPDAVINQVMVRG 552
M M P+ V ++ G
Sbjct: 174 DQMFVMEYQPNTVTFNTLIHG 194
Score = 40.4 bits (93), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 44 SLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKF 100
SL+ K N +++T+I F G EEA ++R+++ LP N L+ ++ G
Sbjct: 527 SLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDK 586
Query: 101 DSVWEFYEEMVLCGLVADVVTYGVLID 127
+ E +EM CG V D T ++I+
Sbjct: 587 AASAELIKEMRSCGFVGDASTISMVIN 613
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 260 bits (665), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 169/602 (28%), Positives = 306/602 (50%), Gaps = 30/602 (4%)
Query: 1 IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVF--STL 58
+F+ L N +Y ++ L + ++L+K+ K V +VF LN LE F PS F
Sbjct: 131 LFFALRNEGIYPSSDSLTL-LLDHLVKT-KQFRVTINVF--LNILE-SDFRPSKFMYGKA 185
Query: 59 IIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGL 115
I A ++ + + L ++ +++ + P++ N L++GL K + + + ++EM+ L
Sbjct: 186 IQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRL 245
Query: 116 VADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAES 175
+ ++TY LID C G+ K+ + + M IEP+++ + L+ GL + +AE+
Sbjct: 246 LPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAEN 305
Query: 176 MFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLC 235
+ + M++ G VP+ +T++ L DGY AL Y + ++ N T +L++ LC
Sbjct: 306 VLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALC 365
Query: 236 KVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
K G++ A G+ PN +YN +IDG+C+ G+L A MEK + PD
Sbjct: 366 KEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHL 425
Query: 296 TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
YN LI+ C +G++E AE + KM +G+ +V TYN LI GY ++ + +K + +M
Sbjct: 426 AYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEM 485
Query: 356 TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
+ G PNVV++ +LI+ CK + A + +M + + P V ++ LIDG G +
Sbjct: 486 EDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKI 545
Query: 416 KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVL 475
++ R KEML+ I ++ T ++LI GL G++S A + LE + K P+
Sbjct: 546 EDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKG----LKPDVFT 601
Query: 476 YAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML-----RGLLRAKRMLDVMML 530
Y ++I + G + + L+ +M+ ++P TY ++ G+ +R+
Sbjct: 602 YNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFG---- 657
Query: 531 LADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGH 590
+M + PD ++ ++ Y +GD++ AF + + E IG +T ++ LG
Sbjct: 658 -----EMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSL--ILGQ 710
Query: 591 LK 592
LK
Sbjct: 711 LK 712
Score = 230 bits (586), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 151/518 (29%), Positives = 255/518 (49%), Gaps = 15/518 (2%)
Query: 52 PSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEF 106
PS+ ++TLI + + G+ E++ V +++ + P++ N LL GL K G +
Sbjct: 247 PSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENV 306
Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
+EM G V D T+ +L D AL +++ +D G++ +IL++ LC
Sbjct: 307 LKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCK 366
Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
E K+ +AE + G+VPN YN ++DGYC+ D+ A M ++P+ +
Sbjct: 367 EGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLA 426
Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
+ L+ C++GE+ A M GV P++ YN LI G+ + + + EME
Sbjct: 427 YNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEME 486
Query: 287 KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
P+V +Y LI LC +L A+ + + M G+ V YN LIDG C +G +E
Sbjct: 487 DNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIE 546
Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
A +M +KG+E N+VT+++LIDG G + A L E+ K L PDV + +LI
Sbjct: 547 DAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLI 606
Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
G GN++ + LY+EM + I P++ T LI K G +E T++ G
Sbjct: 607 SGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG---------IELTERLFG 657
Query: 467 GYC-SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
P+ ++Y ++ G + KA L M ++ D TY +++ G L+ ++
Sbjct: 658 EMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLC 717
Query: 526 DVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
+V L+ +M + P+A ++V+G+ E D SA+
Sbjct: 718 EVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAY 755
Score = 192 bits (488), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 122/438 (27%), Positives = 214/438 (48%), Gaps = 5/438 (1%)
Query: 135 VMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNA 194
+ +A +LF + ++GI P+ T+L+ L + ++F ++ E P+ + Y
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184
Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
+ K++DV + LE ++ M H + P+V + VL+DGLCK + A F M
Sbjct: 185 AIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARR 244
Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
+ P++ YN LIDG+CKAGN ++ + M+ I P + T+N L+KGL G +E AE
Sbjct: 245 LLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAE 304
Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
+L++M G + + T++ L DGY E AL V + GV+ N T S L++
Sbjct: 305 NVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNAL 364
Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
CK G I+ A + + K LVP+ V++ +IDG + G++ + M + + P
Sbjct: 365 CKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDH 424
Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
+ LI + G + NA ++ +K SP+ Y +I + K
Sbjct: 425 LAYNCLIRRFCELGEMENA----EKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFD 480
Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
+ +M + P+ +Y T++ L + ++L+ ++ DM G+ P I +++ G
Sbjct: 481 ILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCC 540
Query: 555 ENGDLKSAFRCS-EFLKE 571
G ++ AFR S E LK+
Sbjct: 541 SKGKIEDAFRFSKEMLKK 558
Score = 187 bits (474), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 123/406 (30%), Positives = 204/406 (50%), Gaps = 7/406 (1%)
Query: 51 NPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFY 107
N +++T+I + G + A +E + P A N L+ + G+ ++ +
Sbjct: 388 NEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEV 447
Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
+M L G+ V TY +LI + + K ++ EM D G P VV Y LI+ LC
Sbjct: 448 NKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKG 507
Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
+K++EA+ + R M + GV P + YN L+DG C + A F EML ++ N+VT+
Sbjct: 508 SKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTY 567
Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
L+DGL G+L A + + +++ G+ P++F YN LI G+ AGN+ ++L EM++
Sbjct: 568 NTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKR 627
Query: 288 FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
I P + TY++LI LC +E E L +M + +++ YN ++ Y GDMEK
Sbjct: 628 SGIKPTLKTYHLLI-SLCTKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEK 683
Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
A ++ QM EK + + T++SLI GQ K G + L EM + + P+ + ++
Sbjct: 684 AFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVK 743
Query: 408 GLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA 453
G + + Y+EM E V + L+ GL + R A
Sbjct: 744 GHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEA 789
Score = 87.0 bits (214), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 117/289 (40%), Gaps = 44/289 (15%)
Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNS 334
LF A SL S K + F+Y +L L + A L + EGI + +
Sbjct: 95 LFSAFSLSSPSLKHD-----FSYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTL 149
Query: 335 LIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
L+D K ++V + E P+ + I K ++ + L+ M
Sbjct: 150 LLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDR 209
Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
+ P V ++ LIDGL K M + +L+ EML ++ PS+ T ++LI
Sbjct: 210 IYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLID------------ 257
Query: 455 NFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTM 514
GYC G K+ K+ M++D++ P T+ T+
Sbjct: 258 ------------GYCKA---------------GNPEKSFKVRERMKADHIEPSLITFNTL 290
Query: 515 LRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
L+GL +A + D +L +M +G VPDA ++ GY N ++A
Sbjct: 291 LKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAAL 339
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 257 bits (656), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 131/456 (28%), Positives = 243/456 (53%), Gaps = 12/456 (2%)
Query: 47 IPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSV 103
+P P +TLI F +G +A + +E +P + N +++G K G+ ++
Sbjct: 134 VPDIIPC--TTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNA 191
Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
+ M + DVVTY ++ C G + +A+ + D M+ + P V+ YTILI
Sbjct: 192 LSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEA 248
Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
C ++ + A + MR+ G P++ TYN L++G CK ++ A++F ++M QPN
Sbjct: 249 TCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPN 308
Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
V+T +++ +C G A M + G P++ +N LI+ C+ G L A+ +
Sbjct: 309 VITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILE 368
Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
+M + P+ +YN L+ G C +++ A L++M G ++VTYN+++ CK+G
Sbjct: 369 KMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDG 428
Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
+E A+ + +Q++ KG P ++T++++IDG KAG A+ L EM K L PD + ++
Sbjct: 429 KVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYS 488
Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
+L+ GLS++G + E ++ + E I P+ T +S++ GL K+ + A++F + ++
Sbjct: 489 SLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINR 548
Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
C PN Y +I+ L Y+G +A +L +++
Sbjct: 549 G----CKPNETSYTILIEGLAYEGMAKEALELLNEL 580
Score = 256 bits (653), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 141/468 (30%), Positives = 239/468 (51%), Gaps = 7/468 (1%)
Query: 81 LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
+P I C L+ G + GK + E + G V DV+TY V+I C G++ AL+
Sbjct: 134 VPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALS 193
Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
+ D M + P VV Y ++ LC+ K+ +A + M + P++ TY L++ C
Sbjct: 194 VLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATC 250
Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
+ + V A++ EM P+VVT+ VL++G+CK G L A F M G PN+
Sbjct: 251 RDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVI 310
Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
+N ++ C G +A L ++M + SP V T+NILI LC G L A +L+KM
Sbjct: 311 THNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKM 370
Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
+ G N ++YN L+ G+CKE M++A+ +M +G P++VT+++++ CK G +
Sbjct: 371 PQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKV 430
Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
+ A+ + ++ K P ++ + +IDGL+K G + ++L EM + P T SSL
Sbjct: 431 EDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSL 490
Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
+ GL + G++ A+ FF E + PN V + +I+ LC Q +A M
Sbjct: 491 VGGLSREGKVDEAIKFFHE----FERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMI 546
Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQV 548
+ +P+ +YT ++ GL + + LL ++ G++ + QV
Sbjct: 547 NRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSSAEQV 594
Score = 241 bits (614), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 131/484 (27%), Positives = 245/484 (50%), Gaps = 10/484 (2%)
Query: 88 NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMID 147
N L +++ G+ + ++F E MV G V D++ LI C G KA + + +
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165
Query: 148 KGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNR 207
G P V+ Y ++I G C ++ A S+ M V P++ TYN ++ C + +
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQ 222
Query: 208 ALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
A+E ML + P+V+T+ +L++ C+ + A M G P++ YN L++
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVN 282
Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
G CK G L EA+ ++M P+V T+NI+++ +C G+ AE LL M ++G
Sbjct: 283 GICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSP 342
Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
+VVT+N LI+ C++G + +A+ + +M + G +PN ++++ L+ G CK +D A+
Sbjct: 343 SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYL 402
Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
MV + PD+V + ++ L KDG +++ + + ++ +P + T +++I GL K
Sbjct: 403 ERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKA 462
Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
G+ A+ E K P+ + Y++++ L +G++ +A K F + +RP+
Sbjct: 463 GKTGKAIKLLDEMRAKD----LKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPN 518
Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSE 567
T+ +++ GL ++++ + L MI G P+ +++ G G K A E
Sbjct: 519 AVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEAL---E 575
Query: 568 FLKE 571
L E
Sbjct: 576 LLNE 579
Score = 223 bits (567), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 124/410 (30%), Positives = 199/410 (48%)
Query: 54 VFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLC 113
++ +I + + G I AL V ++ V P + N +L L GK E + M+
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQR 233
Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
DV+TY +LI+ C V A+ L DEM D+G P VV Y +L++G+C E ++ EA
Sbjct: 234 DCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEA 293
Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
M G PN+ T+N ++ C A + +ML P+VVTF +L++
Sbjct: 294 IKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINF 353
Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
LC+ G L A + M + G PN YN L+ G CK + A+ M PD
Sbjct: 354 LCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPD 413
Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
+ TYN ++ LC G++E A +L ++ +G ++TYN++IDG K G KA+ +
Sbjct: 414 IVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLD 473
Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
+M K ++P+ +T+SSL+ G + G +D A+ + E + P+ V F +++ GL K
Sbjct: 474 EMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSR 533
Query: 414 NMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
+ M+ P+ + + LI GL G AL E +K
Sbjct: 534 QTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNK 583
Score = 193 bits (491), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 173/334 (51%)
Query: 63 SEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTY 122
S +GH + L R P + N L+NG+ K+G+ D +F +M G +V+T+
Sbjct: 253 SGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITH 312
Query: 123 GVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRE 182
+++ C G M A L +M+ KG P+VV + ILI+ LC + + A + M +
Sbjct: 313 NIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQ 372
Query: 183 CGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRA 242
G PN +YN L+ G+CK ++RA+E+ M+ P++VT+ ++ LCK G++
Sbjct: 373 HGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVED 432
Query: 243 AGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIK 302
A ++ G P + YN +IDG KAG +A+ L EM ++ PD TY+ L+
Sbjct: 433 AVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVG 492
Query: 303 GLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEP 362
GL G+++ A + + GI N VT+NS++ G CK ++A+ M +G +P
Sbjct: 493 GLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKP 552
Query: 363 NVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
N +++ LI+G G A+ L E+ K L+
Sbjct: 553 NETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586
Score = 187 bits (475), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 105/391 (26%), Positives = 195/391 (49%), Gaps = 10/391 (2%)
Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
+ ++ +F M++H P+++ L+ G C++G+ R A + G P++
Sbjct: 114 RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVI 173
Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
YN +I G+CKAG + A+S+ +++ +SPDV TYN +++ LC G+L+ A +L +M
Sbjct: 174 TYNVMISGYCKAGEINNALSV---LDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230
Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
+ +V+TY LI+ C++ + A+ + +M ++G P+VVT++ L++G CK G +
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290
Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
D A+ +M P+V+ ++ + G + +L +ML +PSV T + L
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNIL 350
Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
I+ L + G + A++ LEK + C PN + Y ++ C + ++ +A + M
Sbjct: 351 INFLCRKGLLGRAID-ILEKMPQHG---CQPNSLSYNPLLHGFCKEKKMDRAIEYLERMV 406
Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
S PD TY TML L + ++ D + +L + G P + ++ G + G
Sbjct: 407 SRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTG 466
Query: 561 SAFRCSEFLKESRIGSSETEGHTTRSFLGHL 591
A + L E R + + T S +G L
Sbjct: 467 KAIK---LLDEMRAKDLKPDTITYSSLVGGL 494
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 107/228 (46%), Gaps = 7/228 (3%)
Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
V N+ + + G++E+ M G P+++ ++LI G C+ G A +
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI 162
Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
+ VPDV+ + +I G K G + L + M ++P V T ++++ L +G+
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGK 219
Query: 450 ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNC 509
+ A+ L++ + D C P+ + Y +I+A C D + A KL +MR PD
Sbjct: 220 LKQAME-VLDRMLQRD---CYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVV 275
Query: 510 TYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
TY ++ G+ + R+ + + L DM G P+ + + +++R G
Sbjct: 276 TYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTG 323
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 257 bits (656), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 145/462 (31%), Positives = 250/462 (54%), Gaps = 7/462 (1%)
Query: 81 LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
LP+I LLN + K KFD V + + + G+ D+ T +L++C C A +
Sbjct: 69 LPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASS 128
Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
+M+ G EP +V +T LI+G C N+M EA SM M E G+ P++ Y ++D C
Sbjct: 129 FLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLC 188
Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
K VN AL + +M ++ ++P+VV + L++GLC G R A + M K + P++
Sbjct: 189 KNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVI 248
Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
+N LID K G +A L +EM + I+P++FTY LI G C G ++ A + M
Sbjct: 249 TFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLM 308
Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
+G +VV Y SLI+G+CK ++ A+ + +M++KG+ N +T+++LI G + G
Sbjct: 309 ETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKP 368
Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK---ITPSVFTV 437
+ A +++ MV + + P++ + L+ L +G +K+ L ++++M + + + P+++T
Sbjct: 369 NVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTY 428
Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
+ L+HGL NG++ AL F + + + Y IIQ +C G++ A LF
Sbjct: 429 NVLLHGLCYNGKLEKALMVFEDMRKRE----MDIGIITYTIIIQGMCKAGKVKNAVNLFC 484
Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGI 539
+ S ++P+ TYTTM+ GL R + +L M + G+
Sbjct: 485 SLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 230 bits (586), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 142/496 (28%), Positives = 253/496 (51%), Gaps = 6/496 (1%)
Query: 66 GHIEEALWVYRKIEVLPAIQA-CN---ALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVT 121
G+ +AL R +++ ++A CN L NGL +F+ + + MV + ++
Sbjct: 16 GNSGKALSFSRLLDLSFWVRAFCNYREILRNGL-HSLQFNEALDLFTHMVESRPLPSIID 74
Query: 122 YGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMR 181
+ L++ +NL D + G+ + +L++ C ++ A S M
Sbjct: 75 FTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMM 134
Query: 182 ECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELR 241
+ G P++ T+ +L++G+C + A+ ++M+ ++P+VV + ++D LCK G +
Sbjct: 135 KLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVN 194
Query: 242 AAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILI 301
A + F M +G+ P++ +Y L++G C +G +A SL M K +I PDV T+N LI
Sbjct: 195 YALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALI 254
Query: 302 KGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVE 361
G+ AE L +M + I N+ TY SLI+G+C EG +++A + M KG
Sbjct: 255 DAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCF 314
Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
P+VV ++SLI+G CK +D AM ++ EM K L + + +T LI G + G +
Sbjct: 315 PDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEV 374
Query: 422 YKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQ 481
+ M+ + P++ T + L+H L NG++ AL F E K + +PN Y ++
Sbjct: 375 FSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIF-EDMQKREMDGVAPNIWTYNVLLH 433
Query: 482 ALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
LCY+G++ KA +F DMR + TYT +++G+ +A ++ + + L + G+ P
Sbjct: 434 GLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKP 493
Query: 542 DAVINQVMVRGYQENG 557
+ V M+ G G
Sbjct: 494 NVVTYTTMISGLFREG 509
Score = 195 bits (495), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/343 (32%), Positives = 190/343 (55%), Gaps = 6/343 (1%)
Query: 54 VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
+++T+I + + GH+ AL ++ ++E + P + +L+NGL G++ M
Sbjct: 179 MYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGM 238
Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
+ DV+T+ LID +G + A L++EMI I P + YT LI+G C E +
Sbjct: 239 TKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCV 298
Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
EA MF M G P++ Y +L++G+CK V+ A++ ++EM L N +T+ L
Sbjct: 299 DEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTL 358
Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE- 289
+ G +VG+ A F HM GV PNI YN L+ C G + +A+ + +M+K E
Sbjct: 359 IQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREM 418
Query: 290 --ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEK 347
++P+++TYN+L+ GLC G+LE A + + M K + ++TY +I G CK G ++
Sbjct: 419 DGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKN 478
Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEM 390
A+++ + KGV+PNVVT++++I G + G A L+ +M
Sbjct: 479 AVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKM 521
Score = 186 bits (472), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 107/369 (28%), Positives = 184/369 (49%), Gaps = 4/369 (1%)
Query: 206 NRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCL 265
N AL+ + M+ P+++ F L++ + K+ + N H+ GV +++ N L
Sbjct: 54 NEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLL 113
Query: 266 IDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI 325
++ C++ + A S +M K PD+ T+ LI G C ++E A ++ +M + GI
Sbjct: 114 MNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGI 173
Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
+VV Y ++ID CK G + ALS+ QM G+ P+VV ++SL++G C +G A
Sbjct: 174 KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADS 233
Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
L M + + PDV+ F ALID K+G + LY EM+ I P++FT +SLI+G
Sbjct: 234 LLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFC 293
Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLR 505
G + A F K C P+ V Y ++I C ++ A K+F +M L
Sbjct: 294 MEGCVDEARQMFYLMETKG----CFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLT 349
Query: 506 PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRC 565
+ TYTT+++G + + + + M+ G+ P+ V++ NG +K A
Sbjct: 350 GNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMI 409
Query: 566 SEFLKESRI 574
E +++ +
Sbjct: 410 FEDMQKREM 418
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 154/315 (48%), Gaps = 37/315 (11%)
Query: 5 LANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNAL-----------------NSLEI 47
L N+ +++A L++ +T+ + KP + FNAL N +
Sbjct: 222 LCNSGRWRDADSLLRGMTK---RKIKPDVI---TFNALIDAFVKEGKFLDAEELYNEMIR 275
Query: 48 PKFNPSVFS--TLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDS 102
P++F+ +LI F G ++EA ++ +E P + A +L+NG K K D
Sbjct: 276 MSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDD 335
Query: 103 VWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMK---ALNLFDEMIDKGIEPTVVIYTI 159
+ + EM GL + +TY LI G G V K A +F M+ +G+ P + Y +
Sbjct: 336 AMKIFYEMSQKGLTGNTITYTTLIQ---GFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNV 392
Query: 160 LIHGLCNENKMVEAESMFRSMREC---GVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
L+H LC K+ +A +F M++ GV PN++TYN L+ G C + +AL + +M
Sbjct: 393 LLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMR 452
Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
+ ++T+ +++ G+CK G+++ A N F + GV PN+ Y +I G + G
Sbjct: 453 KREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKH 512
Query: 277 EAMSLCSEMEKFEIS 291
EA L +M++ +S
Sbjct: 513 EAHVLFRKMKEDGVS 527
Score = 106 bits (264), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 131/275 (47%), Gaps = 6/275 (2%)
Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK 358
IL GL + Q A L M + L +++ + L++ K + +++C +
Sbjct: 43 ILRNGLHSL-QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIM 101
Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
GV ++ T + L++ C++ A +M+ PD+V FT+LI+G M+E
Sbjct: 102 GVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEA 161
Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
+ + +M+E I P V +++I L KNG ++ AL+ F D+ + P+ V+Y +
Sbjct: 162 MSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLF----DQMENYGIRPDVVMYTS 217
Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
++ LC G+ A L M ++PD T+ ++ ++ + LD L +MI+M
Sbjct: 218 LVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMS 277
Query: 539 IVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESR 573
I P+ ++ G+ G + A R +L E++
Sbjct: 278 IAPNIFTYTSLINGFCMEGCVDEA-RQMFYLMETK 311
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 255 bits (651), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 159/516 (30%), Positives = 263/516 (50%), Gaps = 14/516 (2%)
Query: 10 LYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIE 69
L+ +A+ L+ V + S+ S+ + L E K ++ +I ++ + +
Sbjct: 54 LFSHAQSLLLQVISGKIHSQ--FFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLN 111
Query: 70 EALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLI 126
++ + ++ +P N LL ++ F+ W F+ E +V DV ++G+LI
Sbjct: 112 LSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK-SKVVLDVYSFGILI 170
Query: 127 DCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVV 186
CC G++ K+ +L E+ + G P VVIYT LI G C + ++ +A+ +F M + G+V
Sbjct: 171 KGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLV 230
Query: 187 PNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNF 246
N TY L++G K + E Y +M + PN+ T+ +M+ LCK G + A
Sbjct: 231 ANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQV 290
Query: 247 FVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCG 306
F M + GV NI YN LI G C+ L EA + +M+ I+P++ TYN LI G CG
Sbjct: 291 FDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCG 350
Query: 307 VGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVT 366
VG+L A L + + G+ ++VTYN L+ G+C++GD A + +M E+G++P+ VT
Sbjct: 351 VGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVT 410
Query: 367 FSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEML 426
++ LID ++ N++ A+ L M LVPDV ++ LI G G M E RL+K M+
Sbjct: 411 YTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMV 470
Query: 427 EAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYD 486
E P+ +++I G K G AL E +K +PN Y +I+ LC +
Sbjct: 471 EKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKE----LAPNVASYRYMIEVLCKE 526
Query: 487 GQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAK 522
+ +A +L M + P T++L + RAK
Sbjct: 527 RKSKEAERLVEKMIDSGIDPS----TSILSLISRAK 558
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 188/373 (50%), Gaps = 5/373 (1%)
Query: 192 YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
Y +++ Y + +N ++ +++EM+ + P F L+ + +FF +
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFF-NEN 155
Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
K V +++ + LI G C+AG + ++ L E+ +F SP+V Y LI G C G++E
Sbjct: 156 KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
A+ L +M K G++AN TY LI+G K G ++ + +M E GV PN+ T++ ++
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275
Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
+ CK G A ++ EM + + ++V + LI GL ++ + E ++ +M I
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGIN 335
Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
P++ T ++LI G G++ AL+ L + K+ G SP+ V Y ++ C G
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALS--LCRDLKSRG--LSPSLVTYNILVSGFCRKGDTSG 391
Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
A+K+ +M ++P TYT ++ R+ M + L M ++G+VPD V++
Sbjct: 392 AAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIH 451
Query: 552 GYQENGDLKSAFR 564
G+ G + A R
Sbjct: 452 GFCIKGQMNEASR 464
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 167/318 (52%), Gaps = 5/318 (1%)
Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
+Y +I+ + ++ +L ++S +EM P +N L+ + G +
Sbjct: 96 LYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE- 154
Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
K ++ +V ++ LI G C+ G++EK+ + ++TE G PNVV +++LIDG CK G I
Sbjct: 155 NKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEI 214
Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
+ A L+ EM LV + +T LI+GL K+G K+ +Y++M E + P+++T + +
Sbjct: 215 EKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCV 274
Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
++ L K+GR +A F E ++ G C N V Y +I LC + ++ +A+K+ M+
Sbjct: 275 MNQLCKDGRTKDAFQVFDEMRER--GVSC--NIVTYNTLIGGLCREMKLNEANKVVDQMK 330
Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
SD + P+ TY T++ G ++ + L D+ G+ P V ++V G+ GD
Sbjct: 331 SDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTS 390
Query: 561 SAFRCSEFLKESRIGSSE 578
A + + ++E I S+
Sbjct: 391 GAAKMVKEMEERGIKPSK 408
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 253 bits (647), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 160/519 (30%), Positives = 257/519 (49%), Gaps = 10/519 (1%)
Query: 27 KSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQA 86
K+ +PH + N ++S + + N + T++ F E E ++ K+ + +
Sbjct: 158 KTSRPH-AALRLLNNMSS-QGCEMNVVAYCTVVGGFYEENFKAEGYELFGKM-LASGVSL 214
Query: 87 C----NALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLF 142
C N LL L KKG + ++++ G++ ++ TY + I C +G++ A+ +
Sbjct: 215 CLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMV 274
Query: 143 DEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKV 202
+I++G +P V+ Y LI+GLC +K EAE M G+ P+ YTYN L+ GYCK
Sbjct: 275 GCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKG 334
Query: 203 ADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVY 262
V A + + + P+ T+ L+DGLC GE A F G+ PN+ +Y
Sbjct: 335 GMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILY 394
Query: 263 NCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYK 322
N LI G G + EA L +EM + + P+V T+NIL+ GLC +G + A+GL++ M
Sbjct: 395 NTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMIS 454
Query: 323 EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDA 382
+G ++ T+N LI GY + ME AL + M + GV+P+V T++SL++G CK +
Sbjct: 455 KGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFED 514
Query: 383 AMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIH 442
M Y MV K P++ F L++ L + + E L L +EM + P T +LI
Sbjct: 515 VMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLID 574
Query: 443 GLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSD 502
G KNG + A F + + +P Y II A + A KLF +M
Sbjct: 575 GFCKNGDLDGAYTLFRKMEEAYKVSSSTPT---YNIIIHAFTEKLNVTMAEKLFQEMVDR 631
Query: 503 NLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
L PD TY M+ G + + L +M++ G +P
Sbjct: 632 CLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIP 670
Score = 243 bits (621), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 154/521 (29%), Positives = 252/521 (48%), Gaps = 7/521 (1%)
Query: 62 FSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVAD 118
+ G ++EA+ V+ +++ P + + NA+++ L+ G FD + Y M G+ D
Sbjct: 86 YGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPD 145
Query: 119 VVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFR 178
V ++ + + C AL L + M +G E VV Y ++ G EN E +F
Sbjct: 146 VYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFG 205
Query: 179 SMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVG 238
M GV L T+N L+ CK DV + +++ + PN+ T+ + + GLC+ G
Sbjct: 206 KMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRG 265
Query: 239 ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYN 298
EL A + + G P++ YN LI G CK EA +M + PD +TYN
Sbjct: 266 ELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYN 325
Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK 358
LI G C G ++ AE ++ G + + TY SLIDG C EG+ +AL++ ++ K
Sbjct: 326 TLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGK 385
Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
G++PNV+ +++LI G G I A L EM K L+P+V F L++GL K G + +
Sbjct: 386 GIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445
Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
L K M+ P +FT + LIHG ++ NAL D P+ Y +
Sbjct: 446 DGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNG----VDPDVYTYNS 501
Query: 479 IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG 538
++ LC + + + M P+ T+ +L L R +++ + + LL +M
Sbjct: 502 LLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKS 561
Query: 539 IVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSET 579
+ PDAV ++ G+ +NGDL A+ ++E+ SS T
Sbjct: 562 VNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSST 602
Score = 206 bits (524), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 127/410 (30%), Positives = 210/410 (51%), Gaps = 4/410 (0%)
Query: 48 PKFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVW 104
PK + ++ LI + +EA K+ + P N L+ G K G
Sbjct: 282 PKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAE 341
Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
+ V G V D TY LID C +G+ +AL LF+E + KGI+P V++Y LI GL
Sbjct: 342 RIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGL 401
Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
N+ ++EA + M E G++P + T+N L++G CK+ V+ A M+ P++
Sbjct: 402 SNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDI 461
Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
TF +L+ G ++ A M GV P+++ YN L++G CK + M
Sbjct: 462 FTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKT 521
Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
M + +P++FT+NIL++ LC +L+ A GLL++M + + + VT+ +LIDG+CK GD
Sbjct: 522 MVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGD 581
Query: 345 MEKALSVCSQMTEK-GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
++ A ++ +M E V + T++ +I + N+ A L+ EMV + L PD +
Sbjct: 582 LDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYR 641
Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA 453
++DG K GN+ + EM+E PS+ T+ +I+ L R+ A
Sbjct: 642 LMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEA 691
Score = 177 bits (448), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 112/357 (31%), Positives = 174/357 (48%), Gaps = 6/357 (1%)
Query: 50 FNPSVFS--TLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVW 104
F P F+ +LI G AL ++ + + P + N L+ GL +G
Sbjct: 352 FVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAA 411
Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
+ EM GL+ +V T+ +L++ C G V A L MI KG P + + ILIHG
Sbjct: 412 QLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGY 471
Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
+ KM A + M + GV P++YTYN+L++G CK + +E Y M+ PN+
Sbjct: 472 STQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNL 531
Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
TF +L++ LC+ +L A M V P+ + LIDG CK G+L A +L +
Sbjct: 532 FTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRK 591
Query: 285 MEK-FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
ME+ +++S TYNI+I + AE L Q+M + + TY ++DG+CK G
Sbjct: 592 MEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTG 651
Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVV 400
++ +M E G P++ T +I+ C + A G+ MV K LVP+ V
Sbjct: 652 NVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708
Score = 175 bits (444), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 116/408 (28%), Positives = 194/408 (47%), Gaps = 4/408 (0%)
Query: 156 IYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEM 215
+Y + + K+ EA ++F M P +++YNA+M ++A + Y M
Sbjct: 78 VYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRM 137
Query: 216 LHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNL 275
+ P+V +F + M CK AA +M+ G N+ Y ++ G +
Sbjct: 138 RDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFK 197
Query: 276 FEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSL 335
E L +M +S + T+N L++ LC G ++ E LL K+ K G+L N+ TYN
Sbjct: 198 AEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLF 257
Query: 336 IDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSL 395
I G C+ G+++ A+ + + E+G +P+V+T+++LI G CK A +MV + L
Sbjct: 258 IQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGL 317
Query: 396 VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALN 455
PD + LI G K G ++ R+ + + P FT SLI GL G + AL
Sbjct: 318 EPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALA 377
Query: 456 FFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTML 515
F E K PN +LY +I+ L G IL+A++L ++M L P+ T+ ++
Sbjct: 378 LFNEALGKG----IKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILV 433
Query: 516 RGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
GL + + D L+ MI G PD +++ GY +++A
Sbjct: 434 NGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENAL 481
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 120/275 (43%), Gaps = 42/275 (15%)
Query: 35 CYSVFNALNSLEIPK-FNPSVFS--TLIIAFSEMGHIEEALWVYRKI---EVLPAIQACN 88
C S + L + I K + P +F+ LI +S +E AL + + V P + N
Sbjct: 441 CVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYN 500
Query: 89 ALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK 148
+LLNGL K KF+ V E Y+ MV G ++ T+ +L++ C + +AL L +EM +K
Sbjct: 501 SLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNK 560
Query: 149 GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVV---------------------- 186
+ P V + LI G C + A ++FR M E V
Sbjct: 561 SVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTM 620
Query: 187 --------------PNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMD 232
P+ YTY ++DG+CK +VN +F EM+ + P++ T G +++
Sbjct: 621 AEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVIN 680
Query: 233 GLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLID 267
LC + A M + G+ P C +D
Sbjct: 681 CLCVEDRVYEAAGIIHRMVQKGLVPEAVNTICDVD 715
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 253 bits (646), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 173/591 (29%), Positives = 293/591 (49%), Gaps = 14/591 (2%)
Query: 1 IFYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLII 60
+ ++ ++ LY+ A +I + + + K F+ L + + N +S+L++
Sbjct: 109 LLKLIVSSGLYRVAHAVIVALIKECSRCEKEMLKLMYCFDELREVFGFRLNYPCYSSLLM 168
Query: 61 AFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVA 117
+ +++ A YR++E + + ++N L K G ++ F +++ G V
Sbjct: 169 SLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVL 228
Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDK-GIEPTVVIYTILIHGLCNENKMVEAESM 176
D L+ C ++ AL +FD M + P V Y+ILIHGLC ++ EA +
Sbjct: 229 DSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGL 288
Query: 177 FRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCK 236
M E G P+ TY L+ C +++A + EM+ +PNV T+ VL+DGLC+
Sbjct: 289 KDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCR 348
Query: 237 VGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFT 296
G++ A M K +FP++ YN LI+G+CK G + A L + MEK P+V T
Sbjct: 349 DGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRT 408
Query: 297 YNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT 356
+N L++GLC VG+ A LL++M G+ ++V+YN LIDG C+EG M A + S M
Sbjct: 409 FNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMN 468
Query: 357 EKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMK 416
+EP+ +TF+++I+ CK G D A M+ K + D V T LIDG+ K G +
Sbjct: 469 CFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTR 528
Query: 417 ETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLY 476
+ L + + +++ +I + +++ ++ L K ++ L L K +K P+ V Y
Sbjct: 529 DALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAM-LGKINKLG---LVPSVVTY 584
Query: 477 AAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIK 536
++ L G I + ++ M+ P+ YT ++ GL + R+ + LL+ M
Sbjct: 585 TTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQD 644
Query: 537 MGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE------SRIGSSETEG 581
G+ P+ V VMV+GY NG L A + E RI SS +G
Sbjct: 645 SGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQG 695
Score = 249 bits (636), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 148/481 (30%), Positives = 253/481 (52%), Gaps = 8/481 (1%)
Query: 50 FNPSVFSTLIIAFSEMGHIEEALWVY----RKIEVLPAIQACNALLNGLIKKGKFDSVWE 105
+ + ++L++ F ++ +AL V+ +++ P + + L++GL + G+ + +
Sbjct: 228 LDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFG 287
Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
++M G TY VLI C +G + KA NLFDEMI +G +P V YT+LI GLC
Sbjct: 288 LKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLC 347
Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
+ K+ EA + R M + + P++ TYNAL++GYCK V A E M +PNV
Sbjct: 348 RDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVR 407
Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
TF LM+GLC+VG+ A + M G+ P+I YN LIDG C+ G++ A L S M
Sbjct: 408 TFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSM 467
Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
F+I PD T+ +I C G+ + A L M ++GI + VT +LIDG CK G
Sbjct: 468 NCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKT 527
Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
AL + + + + + + ++D K + + + ++ LVP VV +T L
Sbjct: 528 RDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTL 587
Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
+DGL + G++ + R+ + M + P+V+ + +I+GL + GR+ A + D
Sbjct: 588 VDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLL---SAMQD 644
Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
G SPNHV Y +++ +G++ +A + M ++ Y+++L+G + +++ +
Sbjct: 645 SGV-SPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGI 703
Query: 526 D 526
D
Sbjct: 704 D 704
Score = 132 bits (332), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 124/519 (23%), Positives = 197/519 (37%), Gaps = 131/519 (25%)
Query: 39 FNALNSLEIP---KFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLN 92
FN + + IP K N ++ LI G IEEA V RK+ + P++ NAL+N
Sbjct: 321 FNLFDEM-IPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALIN 379
Query: 93 GLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEP 152
G K G+ +E M +V T+ L++ C G KA++L M+D G+ P
Sbjct: 380 GYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSP 439
Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNA------------------ 194
+V Y +LI GLC E M A + SM + P+ T+ A
Sbjct: 440 DIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFL 499
Query: 195 -----------------LMDGYCKVADVNRALEFYHEMLH-------HNLQ--------- 221
L+DG CKV AL ++ H+L
Sbjct: 500 GLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKG 559
Query: 222 -------------------PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVY 262
P+VVT+ L+DGL + G++ + M G PN++ Y
Sbjct: 560 CKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPY 619
Query: 263 NCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYK 322
+I+G C+ G + EA L S M+ +SP+ TY +++KG G+L+ A ++ M +
Sbjct: 620 TIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVE 679
Query: 323 EGILANVVTYNSLIDGY------------------------------------------- 339
G N Y+SL+ G+
Sbjct: 680 RGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLGGCIS 739
Query: 340 ----------CKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
CKEG +++ + + E+GV +++ C M L T
Sbjct: 740 GLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEK-AMDIIMESYCSKKKHTKCMELITL 798
Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEA 428
++ VP F +I GL K+G+ + L E+L +
Sbjct: 799 VLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTS 837
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 251 bits (641), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 148/463 (31%), Positives = 238/463 (51%), Gaps = 4/463 (0%)
Query: 109 EMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNEN 168
+++ G D VT+ LI+ C +G V +AL L D M++ G +PT++ L++GLC
Sbjct: 132 KIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNG 191
Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
K+ +A + M E G PN TY ++ CK A+E +M ++ + V +
Sbjct: 192 KVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYS 251
Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
+++DGLCK G L A N F M G +I +Y LI G C AG + L +M K
Sbjct: 252 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR 311
Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
+I+PDV ++ LI G+L AE L ++M + GI + VTY SLIDG+CKE ++KA
Sbjct: 312 KITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKA 371
Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
+ M KG PN+ TF+ LI+G CKA ID + L+ +M ++ +V D V + LI G
Sbjct: 372 NHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQG 431
Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
+ G ++ L++EM+ ++ P + + L+ GL NG AL F EK +K+
Sbjct: 432 FCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIF-EKIEKSK--- 487
Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
+ +Y II +C ++ A LF + ++PD TY M+ GL + + +
Sbjct: 488 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEAD 547
Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
+L M + G P+ +++R + GD + + E +K
Sbjct: 548 LLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKR 590
Score = 238 bits (606), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 142/481 (29%), Positives = 242/481 (50%), Gaps = 4/481 (0%)
Query: 82 PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
P + + L + + + ++D V + ++M L G+ ++ T ++I+CCC + A +
Sbjct: 70 PRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSA 129
Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
++I G EP V ++ LI+GLC E ++ EA + M E G P L T NAL++G C
Sbjct: 130 MGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCL 189
Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
V+ A+ M+ QPN VT+G ++ +CK G+ A M + + +
Sbjct: 190 NGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK 249
Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
Y+ +IDG CK G+L A +L +EME D+ Y LI+G C G+ + LL+ M
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309
Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
K I +VV +++LID + KEG + +A + +M ++G+ P+ VT++SLIDG CK +D
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369
Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
A + MV K P++ F LI+G K + + L L+++M + T ++LI
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLI 429
Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
G + G++ A F E + P+ V Y ++ LC +G+ KA ++F +
Sbjct: 430 QGFCELGKLEVAKELFQEMVSRR----VRPDIVSYKILLDGLCDNGEPEKALEIFEKIEK 485
Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKS 561
+ D Y ++ G+ A ++ D L + G+ PD +M+ G + G L
Sbjct: 486 SKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSE 545
Query: 562 A 562
A
Sbjct: 546 A 546
Score = 236 bits (602), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 146/506 (28%), Positives = 245/506 (48%), Gaps = 12/506 (2%)
Query: 58 LIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVA 117
L +AFS MG I K+ P + L+NGL +G+ E + MV G
Sbjct: 123 LSLAFSAMGKI-------IKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKP 175
Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF 177
++T L++ C G V A+ L D M++ G +P V Y ++ +C + A +
Sbjct: 176 TLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELL 235
Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
R M E + + Y+ ++DG CK ++ A ++EM + +++ + L+ G C
Sbjct: 236 RKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYA 295
Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
G M K + P++ ++ LID K G L EA L EM + ISPD TY
Sbjct: 296 GRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTY 355
Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
LI G C QL+ A +L M +G N+ T+N LI+GYCK ++ L + +M+
Sbjct: 356 TSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSL 415
Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
+GV + VT+++LI G C+ G ++ A L+ EMV + + PD+V + L+DGL +G ++
Sbjct: 416 RGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEK 475
Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYA 477
L +++++ ++K+ + + +IHG+ ++ +A + F K P+ Y
Sbjct: 476 ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG----VKPDVKTYN 531
Query: 478 AIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKM 537
+I LC G + +A LF M D P+ CTY ++R L L+ ++ +
Sbjct: 532 IMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRC 591
Query: 538 GIVPDAVINQVMVRGYQENGDLKSAF 563
G DA + MV +G LK +F
Sbjct: 592 GFSVDASTVK-MVVDMLSDGRLKKSF 616
Score = 204 bits (519), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 122/440 (27%), Positives = 220/440 (50%), Gaps = 10/440 (2%)
Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
A++LF EM P ++ ++ L + + + + M G+ NLYT + +++
Sbjct: 56 AVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMIN 115
Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
C+ ++ A +++ +P+ VTF L++GLC G + A M + G P
Sbjct: 116 CCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKP 175
Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
+ N L++G C G + +A+ L M + P+ TY ++K +C GQ A LL
Sbjct: 176 TLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELL 235
Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
+KM + I + V Y+ +IDG CK+G ++ A ++ ++M KG + +++ +++LI G C A
Sbjct: 236 RKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYA 295
Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
G D L +M+ + + PDVV F+ALID K+G ++E L+KEM++ I+P T
Sbjct: 296 GRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTY 355
Query: 438 SSLIHGLFKNGRISNA---LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
+SLI G K ++ A L+ + K C PN + +I C I +
Sbjct: 356 TSLIDGFCKENQLDKANHMLDLMVSKG-------CGPNIRTFNILINGYCKANLIDDGLE 408
Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
LF M + D TY T+++G ++ L +M+ + PD V ++++ G
Sbjct: 409 LFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLC 468
Query: 555 ENGDLKSAFRCSEFLKESRI 574
+NG+ + A E +++S++
Sbjct: 469 DNGEPEKALEIFEKIEKSKM 488
Score = 181 bits (460), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 190/391 (48%), Gaps = 4/391 (1%)
Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
+A +F+ M P L ++ L + + L+ +M + N+ T +++
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114
Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
+ C+ +L A + + K G P+ ++ LI+G C G + EA+ L M +
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174
Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
P + T N L+ GLC G++ A L+ +M + G N VTY ++ CK G A+ +
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234
Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
+M E+ ++ + V +S +IDG CK G++D A L+ EM IK D++++T LI G
Sbjct: 235 LRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCY 294
Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
G + +L ++M++ KITP V S+LI K G++ A E + SP
Sbjct: 295 AGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRG----ISP 350
Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
+ V Y ++I C + Q+ KA+ + M S P+ T+ ++ G +A + D + L
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELF 410
Query: 532 ADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
M G+V D V +++G+ E G L+ A
Sbjct: 411 RKMSLRGVVADTVTYNTLIQGFCELGKLEVA 441
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 126/283 (44%), Gaps = 31/283 (10%)
Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
+ A L Q+M + ++ ++ L + + L +C QM KG+ N+ T S +
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 371 IDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI 430
I+ C+ + A +++ PD V F+ LI+GL +G + E L L M+E
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 431 TPSVFTVSSLIHGLFKNGRISNAL-------------------------------NFFLE 459
P++ T+++L++GL NG++S+A+ +E
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 460 KTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLL 519
K + + V Y+ II LC DG + A LF++M + D YTT++RG
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293
Query: 520 RAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
A R D LL DMIK I PD V ++ + + G L+ A
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREA 336
Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 93/184 (50%), Gaps = 3/184 (1%)
Query: 54 VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
++TLI F E+G +E A +++++ V P I + LL+GL G+ + E +E++
Sbjct: 424 TYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKI 483
Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
+ D+ Y ++I C V A +LF + KG++P V Y I+I GLC + +
Sbjct: 484 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSL 543
Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
EA+ +FR M E G PN TYN L+ + D ++ + E+ + T ++
Sbjct: 544 SEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMV 603
Query: 231 MDGL 234
+D L
Sbjct: 604 VDML 607
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 250 bits (639), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 163/555 (29%), Positives = 265/555 (47%), Gaps = 54/555 (9%)
Query: 58 LIIAFSEMGHIEEALWVYRKIEV--LP-AIQACNALLNGLIKKGKFDSVWEFYEEMVLCG 114
+I F M + A+ +YRK+E+ +P I + N L+ K + ++ G
Sbjct: 112 VIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLG 171
Query: 115 LVADVVTYGVLIDCCCGQGDV---------------MKALNLFDEMIDKGIEPTVVIYTI 159
DVVT+ L+ C + + ++A+ LFD+M++ G+ P V+ +
Sbjct: 172 FQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNT 231
Query: 160 LIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHN 219
LI+GLC E +++EA ++ M G+ ++ TY +++G CK+ D AL +M +
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 291
Query: 220 LQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAM 279
++P+VV + ++D LCK G A F M + G+ PN+F YNC+IDG C G +A
Sbjct: 292 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 351
Query: 280 SLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGY 339
L +M + EI+PDV T+N LI G+L AE L +M I + VTYNS+I G+
Sbjct: 352 RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411
Query: 340 CKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDV 399
CK + A M + P+VVTF+++ID C+A +D M L E+ + LV +
Sbjct: 412 CKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANT 467
Query: 400 VVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL- 458
+ LI G + N+ L++EM+ + P T + L++G +N ++ AL F
Sbjct: 468 TTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEV 527
Query: 459 -----------------------EKTDKTDGGYCS-------PNHVLYAAIIQALCYDGQ 488
K D+ +CS P+ Y +I C
Sbjct: 528 IQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSA 587
Query: 489 ILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQV 548
I A+ LF M+ + PDN TY T++RG L+A + + L+++M G DA +
Sbjct: 588 ISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIK- 646
Query: 549 MVRGYQENGDLKSAF 563
MV +G L +F
Sbjct: 647 MVADLITDGRLDKSF 661
Score = 210 bits (535), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 134/452 (29%), Positives = 221/452 (48%), Gaps = 23/452 (5%)
Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
A++ FD M+ T V +I N+ A S++R M + N+Y++N L+
Sbjct: 90 AIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIK 149
Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLC---KVGELRA------------ 242
+C ++ +L + ++ QP+VVTF L+ GLC ++ E A
Sbjct: 150 CFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLE 209
Query: 243 AGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIK 302
A F M + G+ P + +N LI+G C G + EA +L ++M + DV TY ++
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269
Query: 303 GLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEP 362
G+C +G + A LL KM + I +VV Y+++ID CK+G A + S+M EKG+ P
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329
Query: 363 NVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLY 422
NV T++ +IDG C G A L +M+ + + PDV+ F ALI K+G + E +L
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 389
Query: 423 KEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQA 482
EML I P T +S+I+G K+ R +A + F SP+ V + II
Sbjct: 390 DEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF--------DLMASPDVVTFNTIIDV 441
Query: 483 LCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
C ++ + +L ++ L + TY T++ G + L +MI G+ PD
Sbjct: 442 YCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPD 501
Query: 543 AVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
+ +++ G+ EN L+ A E ++ S+I
Sbjct: 502 TITCNILLYGFCENEKLEEALELFEVIQMSKI 533
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 249 bits (637), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 158/513 (30%), Positives = 264/513 (51%), Gaps = 12/513 (2%)
Query: 77 KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVM 136
K P+I + LL+ + K KFD V E+M G+ ++ TY + I+ C + +
Sbjct: 68 KSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLS 127
Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
AL + +M+ G P++V L++G C+ N++ EA ++ M E G P+ T+ L+
Sbjct: 128 LALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLV 187
Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
G + + A+ M+ QP++VT+G +++GLCK GE A N M K +
Sbjct: 188 HGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIE 247
Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
++ +YN +IDG CK ++ +A L ++ME I PDVFTYN LI LC G+ A L
Sbjct: 248 ADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRL 307
Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE-KGVEPNVVTFSSLIDGQC 375
L M ++ I ++V +N+LID + KEG + +A + +M + K P+VV +++LI G C
Sbjct: 308 LSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFC 367
Query: 376 KAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
K ++ M ++ EM + LV + V +T LI G + + ++K+M+ + P +
Sbjct: 368 KYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIM 427
Query: 436 TVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKL 495
T + L+ GL NG + AL F E K D + V Y +I+ALC G++ L
Sbjct: 428 TYNILLDGLCNNGNVETALVVF-EYMQKRD---MKLDIVTYTTMIEALCKAGKVEDGWDL 483
Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
F + ++P+ TYTTM+ G R + L +M + G +P++ ++R
Sbjct: 484 FCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLR 543
Query: 556 NGDLKSAFRCSEFLKESR----IGSSETEGHTT 584
+GD ++ +E +KE R G + T G T
Sbjct: 544 DGDEAAS---AELIKEMRSCGFAGDASTFGLVT 573
Score = 223 bits (568), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 142/485 (29%), Positives = 238/485 (49%), Gaps = 11/485 (2%)
Query: 51 NPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFY 107
N +S I F + AL + K+ L P+I N+LLNG +
Sbjct: 109 NLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 168
Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
++MV G D VT+ L+ +A+ L + M+ KG +P +V Y +I+GLC
Sbjct: 169 DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKR 228
Query: 168 NKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
+ A ++ M + + ++ YN ++DG CK ++ A + +++M ++P+V T+
Sbjct: 229 GEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTY 288
Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
L+ LC G A M + + P++ +N LID K G L EA L EM K
Sbjct: 289 NPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVK 348
Query: 288 FE-ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDME 346
+ PDV YN LIKG C ++E + ++M + G++ N VTY +LI G+ + D +
Sbjct: 349 SKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCD 408
Query: 347 KALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALI 406
A V QM GV P+++T++ L+DG C GN++ A+ ++ M + + D+V +T +I
Sbjct: 409 NAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMI 468
Query: 407 DGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDG 466
+ L K G +++ L+ + + P+V T ++++ G + G A F+E K DG
Sbjct: 469 EALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEM--KEDG 526
Query: 467 GYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY---TTMLRGLLRAKR 523
PN Y +I+A DG +++L +MRS D T+ T ML K
Sbjct: 527 PL--PNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLHDGRLDKS 584
Query: 524 MLDVM 528
LD++
Sbjct: 585 FLDML 589
Score = 203 bits (517), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 130/454 (28%), Positives = 220/454 (48%), Gaps = 36/454 (7%)
Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
A+ LF +M+ P++V ++ L+ + NK S+ M+ G+ NLYTY+ ++
Sbjct: 59 AIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFIN 118
Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
+C+ + ++ AL +M+ P++VT L++G C + A M + G P
Sbjct: 119 YFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQP 178
Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
+ + L+ G + EA++L M PD+ TY +I GLC G+ + A LL
Sbjct: 179 DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL 238
Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
KM K I A+VV YN++IDG CK M+ A + ++M KG++P+V T++ LI C
Sbjct: 239 NKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNY 298
Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK-ITPSVFT 436
G A L ++M+ K++ PD+V F ALID K+G + E +LY EM+++K P V
Sbjct: 299 GRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVA 358
Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDK--------------------------------- 463
++LI G K R+ + F E + +
Sbjct: 359 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 418
Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
+DG + P+ + Y ++ LC +G + A +F M+ +++ D TYTTM+ L +A +
Sbjct: 419 SDGVH--PDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGK 476
Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
+ D L + G+ P+ V M+ G+ G
Sbjct: 477 VEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKG 510
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 249 bits (636), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 161/565 (28%), Positives = 274/565 (48%), Gaps = 62/565 (10%)
Query: 77 KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGD-- 134
K P+I N LL+ + K KF+ V E+M G+ D+ TY + I+C C +
Sbjct: 76 KSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLS 135
Query: 135 ---------------------------------VMKALNLFDEMIDKGIEPTVVIYTILI 161
+ A+ L D+M++ G +P +T LI
Sbjct: 136 LALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLI 195
Query: 162 HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
HGL NK EA ++ M + G P+L TY +++G CK D++ AL ++M ++
Sbjct: 196 HGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIK 255
Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
NVV F ++D LCK + A + F M G+ PN+ YN LI+ C G +A L
Sbjct: 256 ANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRL 315
Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
S M + +I+P+V T+N LI G+L AE L ++M + I + +TYN LI+G+C
Sbjct: 316 LSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCM 375
Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
+++A + M K PN+ T+++LI+G CK ++ + L+ EM + LV + V
Sbjct: 376 HNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVT 435
Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF--LE 459
+T +I G + G+ ++K+M+ ++ + T S L+HGL G++ AL F L+
Sbjct: 436 YTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQ 495
Query: 460 KTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLL 519
K++ N +Y +I+ +C G++ +A LF + +++PD TY TM+ GL
Sbjct: 496 KSEM------ELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLC 546
Query: 520 RAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESR----IG 575
+ + + L M + G +P++ ++R + D ++ +E +KE R +G
Sbjct: 547 SKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAAS---AELIKEMRSSGFVG 603
Query: 576 SSET---------EGHTTRSFLGHL 591
+ T +G +SFL L
Sbjct: 604 DASTISLVTNMLHDGRLDKSFLNML 628
Score = 246 bits (627), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 144/493 (29%), Positives = 249/493 (50%), Gaps = 10/493 (2%)
Query: 54 VFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEM 110
+S I F + AL V K+ L P I ++LLNG + ++M
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 179
Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
V G D T+ LI +A+ L D+M+ +G +P +V Y +++GLC +
Sbjct: 180 VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239
Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
A ++ M + N+ +N ++D CK V A++ + EM ++PNVVT+ L
Sbjct: 240 DLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSL 299
Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
++ LC G A +M + + PN+ +N LID K G L EA L EM + I
Sbjct: 300 INCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSI 359
Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
PD TYN+LI G C +L+ A+ + + M + L N+ TYN+LI+G+CK +E +
Sbjct: 360 DPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVE 419
Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
+ +M+++G+ N VT++++I G +AG+ D+A ++ +MV + D++ ++ L+ GL
Sbjct: 420 LFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLC 479
Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
G + L ++K + ++++ ++F +++I G+ K G++ A + F + K
Sbjct: 480 SYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK------- 532
Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMML 530
P+ V Y +I LC + +A LF M+ D P++ TY T++R LR L
Sbjct: 533 PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAEL 592
Query: 531 LADMIKMGIVPDA 543
+ +M G V DA
Sbjct: 593 IKEMRSSGFVGDA 605
Score = 218 bits (554), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 134/448 (29%), Positives = 227/448 (50%), Gaps = 13/448 (2%)
Query: 133 GDVMK---ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNL 189
D++K A++LF +M+ P++V + L+ + NK S+ M+ G+ +L
Sbjct: 59 SDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDL 118
Query: 190 YTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVH 249
YTY+ ++ +C+ + ++ AL +M+ +P++VT L++G C + A
Sbjct: 119 YTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQ 178
Query: 250 MAKFGVFPNIFVYNCLIDG---HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCG 306
M + G P+ F + LI G H KA EA++L +M + PD+ TY ++ GLC
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLFLHNKAS---EAVALVDQMVQRGCQPDLVTYGTVVNGLCK 235
Query: 307 VGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVT 366
G ++ A LL KM I ANVV +N++ID CK +E A+ + ++M KG+ PNVVT
Sbjct: 236 RGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVT 295
Query: 367 FSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEML 426
++SLI+ C G A L + M+ K + P+VV F ALID K+G + E +L++EM+
Sbjct: 296 YNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMI 355
Query: 427 EAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYD 486
+ I P T + LI+G + R+ A F K C PN Y +I C
Sbjct: 356 QRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKD----CLPNIQTYNTLINGFCKC 411
Query: 487 GQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVIN 546
++ +LF +M L + TYTT+++G +A M+ M+ + D +
Sbjct: 412 KRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTY 471
Query: 547 QVMVRGYQENGDLKSAFRCSEFLKESRI 574
+++ G G L +A ++L++S +
Sbjct: 472 SILLHGLCSYGKLDTALVIFKYLQKSEM 499
Score = 205 bits (521), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 132/474 (27%), Positives = 229/474 (48%), Gaps = 4/474 (0%)
Query: 90 LLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG 149
L N L K D + + +MV +V + L+ ++L ++M G
Sbjct: 54 LRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLG 113
Query: 150 IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
I + Y+I I+ C +++ A ++ M + G P++ T ++L++GYC ++ A+
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173
Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
+M+ +P+ TF L+ GL + A M + G P++ Y +++G
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233
Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
CK G++ A++L ++ME I +V +N +I LC +E A L +M +GI NV
Sbjct: 234 CKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNV 293
Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
VTYNSLI+ C G A + S M EK + PNVVTF++LID K G + A L+ E
Sbjct: 294 VTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEE 353
Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
M+ +S+ PD + + LI+G + E +++K M+ P++ T ++LI+G K R
Sbjct: 354 MIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKR 413
Query: 450 ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNC 509
+ + + F E + + G N V Y IIQ G A +F M S+ + D
Sbjct: 414 VEDGVELFREMSQRGLVG----NTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIM 469
Query: 510 TYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
TY+ +L GL ++ +++ + K + + I M+ G + G + A+
Sbjct: 470 TYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAW 523
Score = 201 bits (512), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/404 (28%), Positives = 212/404 (52%), Gaps = 4/404 (0%)
Query: 159 ILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
IL + L + K+ +A +F M + P++ +N L+ K+ + +M
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 219 NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
+ ++ T+ + ++ C+ +L A M K G P+I + L++G+C + + +A
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
++L +M + PD FT+ LI GL + A L+ +M + G ++VTY ++++G
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
CK GD++ AL++ ++M ++ NVV F+++ID CK +++ A+ L+TEM K + P+
Sbjct: 233 LCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPN 292
Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
VV + +LI+ L G + RL MLE KI P+V T ++LI FK G++ A
Sbjct: 293 VVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHE 352
Query: 459 EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
E ++ P+ + Y +I C ++ +A ++F M S + P+ TY T++ G
Sbjct: 353 EMIQRS----IDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGF 408
Query: 519 LRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
+ KR+ D + L +M + G+V + V +++G+ + GD SA
Sbjct: 409 CKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSA 452
Score = 190 bits (482), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 114/386 (29%), Positives = 200/386 (51%), Gaps = 9/386 (2%)
Query: 39 FNALNSLEIP--KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNG 93
N LN +E K N +F+T+I + + H+E A+ ++ ++E + P + N+L+N
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 94 LIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPT 153
L G++ M+ + +VVT+ LID +G +++A L +EMI + I+P
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362
Query: 154 VVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYH 213
+ Y +LI+G C N++ EA+ MF+ M +PN+ TYN L++G+CK V +E +
Sbjct: 363 TITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFR 422
Query: 214 EMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG 273
EM L N VT+ ++ G + G+ +A F M V +I Y+ L+ G C G
Sbjct: 423 EMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYG 482
Query: 274 NLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYN 333
L A+ + ++K E+ ++F YN +I+G+C G++ A L + I +VVTYN
Sbjct: 483 KLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYN 539
Query: 334 SLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIK 393
++I G C + +++A + +M E G PN T+++LI + + A+ L EM
Sbjct: 540 TMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSS 599
Query: 394 SLVPDVVVFTALIDGLSKDGNMKETL 419
V D +L+ + DG + ++
Sbjct: 600 GFVGDASTI-SLVTNMLHDGRLDKSF 624
Score = 185 bits (470), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 200/404 (49%), Gaps = 7/404 (1%)
Query: 54 VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
+ T++ + G I+ AL + K+E + + N +++ L K + + + EM
Sbjct: 225 TYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEM 284
Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
G+ +VVTY LI+C C G A L M++K I P VV + LI E K+
Sbjct: 285 ETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKL 344
Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
VEAE + M + + P+ TYN L++G+C ++ A + + M+ + PN+ T+ L
Sbjct: 345 VEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTL 404
Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
++G CK + F M++ G+ N Y +I G +AG+ A + +M +
Sbjct: 405 INGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRV 464
Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
D+ TY+IL+ GLC G+L+ A + + + K + N+ YN++I+G CK G + +A
Sbjct: 465 PTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWD 524
Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
+ ++ ++P+VVT++++I G C + A L+ +M +P+ + LI
Sbjct: 525 LFCSLS---IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANL 581
Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNAL 454
+D + + L KEM + T+ SL+ + +GR+ +
Sbjct: 582 RDCDRAASAELIKEMRSSGFVGDASTI-SLVTNMLHDGRLDKSF 624
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 249 bits (635), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 134/431 (31%), Positives = 225/431 (52%), Gaps = 4/431 (0%)
Query: 81 LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
LP+I LL+ + K ++D V +E+M + G+ + T +++ C C +A
Sbjct: 80 LPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASC 139
Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
+M+ G EP +V +T L++G C+ N++ +A ++F + G PN+ TY L+ C
Sbjct: 140 FLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLC 199
Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
K +N A+E +++M + +PNVVT+ L+ GLC++G A M K + PN+
Sbjct: 200 KNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVI 259
Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
+ LID K G L EA L + M + + PDVFTY LI GLC G L+ A + M
Sbjct: 260 TFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLM 319
Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
+ G N V Y +LI G+CK +E + + +M++KGV N +T++ LI G C G
Sbjct: 320 ERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRP 379
Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
D A ++ +M + PD+ + L+DGL +G +++ L +++ M + ++ ++ T + +
Sbjct: 380 DVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTII 439
Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
I G+ K G++ +A + F K PN + Y +I C G I +A LF M+
Sbjct: 440 IQGMCKLGKVEDAFDLFCSLFSKG----MKPNVITYTTMISGFCRRGLIHEADSLFKKMK 495
Query: 501 SDNLRPDNCTY 511
D P+ Y
Sbjct: 496 EDGFLPNESVY 506
Score = 218 bits (554), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 114/357 (31%), Positives = 192/357 (53%)
Query: 77 KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVM 136
K+ P + +LLNG + + +++++ G +VVTY LI C C +
Sbjct: 146 KLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLN 205
Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
A+ LF++M G P VV Y L+ GLC + +A + R M + + PN+ T+ AL+
Sbjct: 206 HAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALI 265
Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
D + KV + A E Y+ M+ ++ P+V T+G L++GLC G L A F M + G +
Sbjct: 266 DAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCY 325
Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
PN +Y LI G CK+ + + M + EM + + + TY +LI+G C VG+ + A+ +
Sbjct: 326 PNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEV 385
Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
+M ++ TYN L+DG C G +EKAL + M ++ ++ N+VT++ +I G CK
Sbjct: 386 FNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCK 445
Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
G ++ A L+ + K + P+V+ +T +I G + G + E L+K+M E P+
Sbjct: 446 LGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPN 502
Score = 212 bits (540), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 139/473 (29%), Positives = 224/473 (47%), Gaps = 16/473 (3%)
Query: 70 EALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCC 129
A YRKI L NGL +F+ + + MV + ++ + L+
Sbjct: 46 RAFSSYRKI-----------LRNGL-HNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVI 93
Query: 130 CGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNL 189
++LF++M GI P + I++H +C ++ A M + G P+L
Sbjct: 94 AKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDL 153
Query: 190 YTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVH 249
T+ +L++GYC + A+ + ++L +PNVVT+ L+ LCK L A F
Sbjct: 154 VTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQ 213
Query: 250 MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQ 309
M G PN+ YN L+ G C+ G +A L +M K I P+V T+ LI VG+
Sbjct: 214 MGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGK 273
Query: 310 LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
L A+ L M + + +V TY SLI+G C G +++A + M G PN V +++
Sbjct: 274 LMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTT 333
Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
LI G CK+ ++ M ++ EM K +V + + +T LI G G ++ +M +
Sbjct: 334 LIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRR 393
Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
P + T + L+ GL NG++ AL F E K + N V Y IIQ +C G++
Sbjct: 394 APPDIRTYNVLLDGLCCNGKVEKALMIF-EYMRKRE---MDINIVTYTIIIQGMCKLGKV 449
Query: 490 LKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
A LF + S ++P+ TYTTM+ G R + + L M + G +P+
Sbjct: 450 EDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPN 502
Score = 199 bits (506), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 125/442 (28%), Positives = 217/442 (49%), Gaps = 4/442 (0%)
Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
AL+LF M+ P+++ +T L+ + N+ S+F M+ G+ P L T N +M
Sbjct: 67 ALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMH 126
Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
C + RA F +M+ +P++VTF L++G C + A F + G P
Sbjct: 127 CVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKP 186
Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
N+ Y LI CK +L A+ L ++M P+V TYN L+ GLC +G+ A LL
Sbjct: 187 NVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLL 246
Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
+ M K I NV+T+ +LID + K G + +A + + M + V P+V T+ SLI+G C
Sbjct: 247 RDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMY 306
Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
G +D A ++ M P+ V++T LI G K +++ ++++ EM + + + T
Sbjct: 307 GLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITY 366
Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
+ LI G GR A F + + + P+ Y ++ LC +G++ KA +F
Sbjct: 367 TVLIQGYCLVGRPDVAQEVFNQMSSRR----APPDIRTYNVLLDGLCCNGKVEKALMIFE 422
Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
MR + + TYT +++G+ + ++ D L + G+ P+ + M+ G+ G
Sbjct: 423 YMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRG 482
Query: 558 DLKSAFRCSEFLKESRIGSSET 579
+ A + +KE +E+
Sbjct: 483 LIHEADSLFKKMKEDGFLPNES 504
Score = 163 bits (413), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 154/311 (49%), Gaps = 5/311 (1%)
Query: 25 LLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYR---KIEVL 81
L K+R +H +FN + + + N ++ L+ E+G +A W+ R K +
Sbjct: 198 LCKNRHLNHAV-ELFNQMGT-NGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIE 255
Query: 82 PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
P + AL++ +K GK E Y M+ + DV TYG LI+ C G + +A +
Sbjct: 256 PNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQM 315
Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
F M G P VIYT LIHG C ++ + +F M + GVV N TY L+ GYC
Sbjct: 316 FYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCL 375
Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
V + A E +++M P++ T+ VL+DGLC G++ A F +M K + NI
Sbjct: 376 VGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVT 435
Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
Y +I G CK G + +A L + + P+V TY +I G C G + A+ L +KM
Sbjct: 436 YTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMK 495
Query: 322 KEGILANVVTY 332
++G L N Y
Sbjct: 496 EDGFLPNESVY 506
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 165/371 (44%), Gaps = 39/371 (10%)
Query: 183 CGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRA 242
C + +Y ++ N AL+ + M+H P+++ F L+ + K+
Sbjct: 42 CFWIRAFSSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDV 101
Query: 243 AGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIK 302
+ F M G+ P + N ++ C + A +M K PD+ T+ L+
Sbjct: 102 VISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLN 161
Query: 303 GLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEP 362
G C ++E A L ++ G NVVTY +LI CK + A+ + +QM G P
Sbjct: 162 GYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRP 221
Query: 363 NVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLY 422
NVVT+++L+ G C+ G A L +M+ + + P+V+ FTALID K G + E LY
Sbjct: 222 NVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELY 281
Query: 423 KEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQA 482
M++ + P VFT Y ++I
Sbjct: 282 NVMIQMSVYPDVFT---------------------------------------YGSLING 302
Query: 483 LCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
LC G + +A ++F M + P+ YTT++ G ++KR+ D M + +M + G+V +
Sbjct: 303 LCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVAN 362
Query: 543 AVINQVMVRGY 553
+ V+++GY
Sbjct: 363 TITYTVLIQGY 373
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 248 bits (634), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 142/482 (29%), Positives = 256/482 (53%), Gaps = 4/482 (0%)
Query: 81 LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
LP N L + + + ++D V F + M L G+ D+ T ++I+C C + ++ A +
Sbjct: 67 LPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFS 126
Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
+ G EP + ++ L++G C E ++ EA ++ M E P+L T + L++G C
Sbjct: 127 VLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLC 186
Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
V+ AL M+ + QP+ VT+G +++ LCK G A + F M + + ++
Sbjct: 187 LKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVV 246
Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
Y+ +ID CK G+ +A+SL +EME I DV TY+ LI GLC G+ + +L++M
Sbjct: 247 QYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM 306
Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
I+ +VVT+++LID + KEG + +A + ++M +G+ P+ +T++SLIDG CK +
Sbjct: 307 IGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCL 366
Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
A ++ MV K PD+V ++ LI+ K + + +RL++E+ + P+ T ++L
Sbjct: 367 HEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTL 426
Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
+ G ++G+++ A F E + P+ V Y ++ LC +G++ KA ++F M+
Sbjct: 427 VLGFCQSGKLNAAKELFQEMVSRG----VPPSVVTYGILLDGLCDNGELNKALEIFEKMQ 482
Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
+ Y ++ G+ A ++ D L + G+ PD V VM+ G + G L
Sbjct: 483 KSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLS 542
Query: 561 SA 562
A
Sbjct: 543 EA 544
Score = 248 bits (632), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 144/486 (29%), Positives = 247/486 (50%), Gaps = 11/486 (2%)
Query: 58 LIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVA 117
L+ AFS +G W K+ P + L+NG +G+ + MV
Sbjct: 121 LLFAFSVLGRA----W---KLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRP 173
Query: 118 DVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMF 177
D+VT LI+ C +G V +AL L D M++ G +P V Y +++ LC A +F
Sbjct: 174 DLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLF 233
Query: 178 RSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
R M E + ++ Y+ ++D CK + AL ++EM ++ +VVT+ L+ GLC
Sbjct: 234 RKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCND 293
Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
G+ M + P++ ++ LID K G L EA L +EM I+PD TY
Sbjct: 294 GKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITY 353
Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
N LI G C L A + M +G ++VTY+ LI+ YCK ++ + + +++
Sbjct: 354 NSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISS 413
Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
KG+ PN +T+++L+ G C++G ++AA L+ EMV + + P VV + L+DGL +G + +
Sbjct: 414 KGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNK 473
Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYA 477
L ++++M ++++T + + +IHG+ ++ +A + F +DK P+ V Y
Sbjct: 474 ALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKG----VKPDVVTYN 529
Query: 478 AIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKM 537
+I LC G + +A LF M+ D PD+ TY ++R L ++ + L+ +M
Sbjct: 530 VMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVC 589
Query: 538 GIVPDA 543
G D+
Sbjct: 590 GFSADS 595
Score = 236 bits (601), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 142/474 (29%), Positives = 244/474 (51%), Gaps = 8/474 (1%)
Query: 54 VFSTLIIAFSEMGHIEEAL-WVYRKIEV--LPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
FSTL+ F G + EA+ V R +E+ P + + L+NGL KG+ + M
Sbjct: 142 TFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRM 201
Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
V G D VTYG +++ C G+ AL+LF +M ++ I+ +VV Y+I+I LC +
Sbjct: 202 VEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSF 261
Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
+A S+F M G+ ++ TY++L+ G C + + EM+ N+ P+VVTF L
Sbjct: 262 DDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSAL 321
Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
+D K G+L A + M G+ P+ YN LIDG CK L EA + M
Sbjct: 322 IDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGC 381
Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
PD+ TY+ILI C +++ L +++ +G++ N +TYN+L+ G+C+ G + A
Sbjct: 382 EPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKE 441
Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
+ +M +GV P+VVT+ L+DG C G ++ A+ ++ +M + + ++ +I G+
Sbjct: 442 LFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMC 501
Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
+ + L+ + + + P V T + +I GL K G +S A F + K DG C+
Sbjct: 502 NASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLF--RKMKEDG--CT 557
Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
P+ Y +I+A ++ + +L +M+ D+ T M+ +L +R+
Sbjct: 558 PDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSST-IKMVIDMLSDRRL 610
Score = 216 bits (551), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 130/440 (29%), Positives = 217/440 (49%), Gaps = 4/440 (0%)
Query: 135 VMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNA 194
V A++LF+ MI PT + + L + + + M G+ ++YT
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 110
Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
+++ YC+ + A +P+ +TF L++G C G + A M +
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170
Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
P++ + LI+G C G + EA+ L M ++ PD TY ++ LC G A
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 230
Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
L +KM + I A+VV Y+ +ID CK+G + ALS+ ++M KG++ +VVT+SSLI G
Sbjct: 231 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 290
Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
C G D + EM+ ++++PDVV F+ALID K+G + E LY EM+ I P
Sbjct: 291 CNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT 350
Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
T +SLI G K + A F D C P+ V Y+ +I + C ++ +
Sbjct: 351 ITYNSLIDGFCKENCLHEANQMF----DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMR 406
Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
LF ++ S L P+ TY T++ G ++ ++ L +M+ G+ P V +++ G
Sbjct: 407 LFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLC 466
Query: 555 ENGDLKSAFRCSEFLKESRI 574
+NG+L A E +++SR+
Sbjct: 467 DNGELNKALEIFEKMQKSRM 486
Score = 191 bits (485), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 110/394 (27%), Positives = 205/394 (52%), Gaps = 4/394 (1%)
Query: 169 KMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFG 228
K+ +A +F SM + +P +N L + + L F M + ++ ++ T
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 229 VLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKF 288
++++ C+ +L A + K G P+ ++ L++G C G + EA++L M +
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
+ PD+ T + LI GLC G++ A L+ +M + G + VTY +++ CK G+ A
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
L + +M E+ ++ +VV +S +ID CK G+ D A+ L+ EM +K + DVV +++LI G
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289
Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
L DG + ++ +EM+ I P V T S+LI K G++ A + E +
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRG---- 345
Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
+P+ + Y ++I C + + +A+++F M S PD TY+ ++ +AKR+ D M
Sbjct: 346 IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGM 405
Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
L ++ G++P+ + +V G+ ++G L +A
Sbjct: 406 RLFREISSKGLIPNTITYNTLVLGFCQSGKLNAA 439
Score = 49.7 bits (117), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 95/202 (47%), Gaps = 16/202 (7%)
Query: 353 SQMTEKGVEPNVVTFSSLIDG------QCKAGNIDA----AMGLYTEMVIKSLVPDVVVF 402
+Q+ EKG +++ +SS+ + + + G +D A+ L+ M+ +P + F
Sbjct: 16 TQILEKGT--SLLHYSSITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDF 73
Query: 403 TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD 462
L +++ L K M I ++T++ +I+ + ++ A + L +
Sbjct: 74 NRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSV-LGRAW 132
Query: 463 KTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAK 522
K GY P+ + ++ ++ C +G++ +A L M RPD T +T++ GL
Sbjct: 133 KL--GY-EPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKG 189
Query: 523 RMLDVMMLLADMIKMGIVPDAV 544
R+ + ++L+ M++ G PD V
Sbjct: 190 RVSEALVLIDRMVEYGFQPDEV 211
>sp|Q9ZUA2|PP141_ARATH Pentatricopeptide repeat-containing protein At2g01740
OS=Arabidopsis thaliana GN=At2g01740 PE=3 SV=1
Length = 559
Score = 248 bits (634), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 145/486 (29%), Positives = 248/486 (51%), Gaps = 15/486 (3%)
Query: 76 RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDV 135
RK LP CN ++ LI +F +V G ++ ++ C G V
Sbjct: 13 RKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQV 72
Query: 136 MKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMREC-GVV--PNLYTY 192
A ++ M G EP V+ Y LI G C + A + S+R G + P++ ++
Sbjct: 73 KFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSF 132
Query: 193 NALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK 252
N+L +G+ K+ ++ + ML PNVVT+ +D CK GEL+ A F M +
Sbjct: 133 NSLFNGFSKMKMLDEVFVYMGVMLKC-CSPNVVTYSTWIDTFCKSGELQLALKSFHSMKR 191
Query: 253 FGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEG 312
+ PN+ + CLIDG+CKAG+L A+SL EM + +S +V TY LI G C G+++
Sbjct: 192 DALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQR 251
Query: 313 AEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLID 372
AE + +M ++ + N + Y ++IDG+ + GD + A+ ++M +G+ ++ + +I
Sbjct: 252 AEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIIS 311
Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
G C G + A + +M LVPD+V+FT +++ K G MK + +Y +++E P
Sbjct: 312 GLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEP 371
Query: 433 SVFTVSSLIHGLFKNGRISNALNFF-LEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
V +S++I G+ KNG++ A+ +F +EK N V+Y +I ALC +G ++
Sbjct: 372 DVVALSTMIDGIAKNGQLHEAIVYFCIEKA----------NDVMYTVLIDALCKEGDFIE 421
Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
+LFS + L PD YT+ + GL + ++D L M++ G++ D + ++
Sbjct: 422 VERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIY 481
Query: 552 GYQENG 557
G G
Sbjct: 482 GLASKG 487
Score = 220 bits (560), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 149/504 (29%), Positives = 243/504 (48%), Gaps = 55/504 (10%)
Query: 47 IPKF--NPSVFS--TLIIAFSEMGHIEEALWVYRKIEVL------PAIQACNALLNGLIK 96
+P+F P V S +LI G I A V + P I + N+L NG K
Sbjct: 82 MPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSK 141
Query: 97 KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
D V+ V GV++ CC P VV
Sbjct: 142 MKMLDEVF---------------VYMGVMLKCC---------------------SPNVVT 165
Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
Y+ I C ++ A F SM+ + PN+ T+ L+DGYCK D+ A+ Y EM
Sbjct: 166 YSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMR 225
Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
+ NVVT+ L+DG CK GE++ A + M + V PN VY +IDG + G+
Sbjct: 226 RVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSD 285
Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
AM ++M + D+ Y ++I GLCG G+L+ A +++ M K ++ ++V + +++
Sbjct: 286 NAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMM 345
Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
+ Y K G M+ A+++ ++ E+G EP+VV S++IDG K G + A+ + + K+
Sbjct: 346 NAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFC--IEKA-- 401
Query: 397 PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNF 456
+ V++T LID L K+G+ E RL+ ++ EA + P F +S I GL K G + +A
Sbjct: 402 -NDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDA--- 457
Query: 457 FLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLR 516
F KT G + + Y +I L G +++A ++F +M + + PD+ + ++R
Sbjct: 458 FKLKTRMVQEGLL-LDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIR 516
Query: 517 GLLRAKRMLDVMMLLADMIKMGIV 540
+ M LL DM + G+V
Sbjct: 517 AYEKEGNMAAASDLLLDMQRRGLV 540
Score = 209 bits (533), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 121/398 (30%), Positives = 205/398 (51%), Gaps = 16/398 (4%)
Query: 172 EAESMFRSMRECGVVPNLYTYN----ALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTF 227
EA +R+ +P+ +T N L++ C + +L+F ++ P+ +F
Sbjct: 4 EALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGIL----SLKFLAYLVSRGYTPHRSSF 59
Query: 228 GVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEK 287
++ +CK+G+++ A + M +FG P++ YN LIDGHC+ G++ A + +
Sbjct: 60 NSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRA 119
Query: 288 ---FEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
F PD+ ++N L G + L+ + M K NVVTY++ ID +CK G+
Sbjct: 120 SHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLK-CCSPNVVTYSTWIDTFCKSGE 178
Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
++ AL M + PNVVTF+ LIDG CKAG+++ A+ LY EM + +VV +TA
Sbjct: 179 LQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTA 238
Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
LIDG K G M+ +Y M+E ++ P+ +++I G F+ G NA+ F + ++
Sbjct: 239 LIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQG 298
Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
+ Y II LC +G++ +A+++ DM +L PD +TTM+ ++ RM
Sbjct: 299 ----MRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRM 354
Query: 525 LDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
+ + +I+ G PD V M+ G +NG L A
Sbjct: 355 KAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEA 392
Score = 177 bits (448), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 114/395 (28%), Positives = 193/395 (48%), Gaps = 26/395 (6%)
Query: 25 LLKSRKPHHVCYSVF--------------NALNSLEIPKFNPSV--FSTLIIAFSEMGHI 68
+LK P+ V YS + + +S++ +P+V F+ LI + + G +
Sbjct: 155 MLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDL 214
Query: 69 EEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVL 125
E A+ +Y R++ + + AL++G KKG+ E Y MV + + + Y +
Sbjct: 215 EVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTI 274
Query: 126 IDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGV 185
ID +GD A+ +M+++G+ + Y ++I GLC K+ EA + M + +
Sbjct: 275 IDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDL 334
Query: 186 VPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGN 245
VP++ + +M+ Y K + A+ YH+++ +P+VV ++DG+ K G+L A
Sbjct: 335 VPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIV 394
Query: 246 FF-VHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGL 304
+F + A N +Y LID CK G+ E L S++ + + PD F Y I GL
Sbjct: 395 YFCIEKA------NDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGL 448
Query: 305 CGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNV 364
C G L A L +M +EG+L +++ Y +LI G +G M +A V +M G+ P+
Sbjct: 449 CKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDS 508
Query: 365 VTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDV 399
F LI K GN+ AA L +M + LV V
Sbjct: 509 AVFDLLIRAYEKEGNMAAASDLLLDMQRRGLVTAV 543
Score = 169 bits (427), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 108/413 (26%), Positives = 199/413 (48%), Gaps = 34/413 (8%)
Query: 55 FSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
F++L FS+M ++E ++VY + + P + + ++ K G+ + + M
Sbjct: 132 FNSLFNGFSKMKMLDE-VFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMK 190
Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
L +VVT+ LID C GD+ A++L+ EM + VV YT LI G C + +M
Sbjct: 191 RDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQ 250
Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
AE M+ M E V PN Y ++DG+ + D + A++F +ML+ ++ ++ +GV++
Sbjct: 251 RAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVII 310
Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
GLC G+L+ A M K + P++ ++ +++ + K+G + A+++ ++ +
Sbjct: 311 SGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFE 370
Query: 292 PDVFT------------------------------YNILIKGLCGVGQLEGAEGLLQKMY 321
PDV Y +LI LC G E L K+
Sbjct: 371 PDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKIS 430
Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
+ G++ + Y S I G CK+G++ A + ++M ++G+ +++ +++LI G G +
Sbjct: 431 EAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMV 490
Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
A ++ EM+ + PD VF LI K+GNM L +M + +V
Sbjct: 491 EARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLVTAV 543
Score = 139 bits (349), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 168/340 (49%), Gaps = 16/340 (4%)
Query: 240 LRAAGNFFVHMAKFGVFPNIFVYN----CLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
+R A F + K P+ F N LI+ +C +L L S +P
Sbjct: 2 VREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSR----GYTPHRS 57
Query: 296 TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
++N ++ +C +GQ++ AE ++ M + G +V++YNSLIDG+C+ GD+ A V +
Sbjct: 58 SFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESL 117
Query: 356 TEKG---VEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKD 412
+P++V+F+SL +G K +D +Y +++K P+VV ++ ID K
Sbjct: 118 RASHGFICKPDIVSFNSLFNGFSKMKMLDEVF-VYMGVMLKCCSPNVVTYSTWIDTFCKS 176
Query: 413 GNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPN 472
G ++ L+ + M ++P+V T + LI G K G + A++ + E S N
Sbjct: 177 GELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVR----MSLN 232
Query: 473 HVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLA 532
V Y A+I C G++ +A +++S M D + P++ YTT++ G + + M LA
Sbjct: 233 VVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLA 292
Query: 533 DMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKES 572
M+ G+ D V++ G NG LK A E +++S
Sbjct: 293 KMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKS 332
Score = 90.1 bits (222), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 108/214 (50%), Gaps = 8/214 (3%)
Query: 54 VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
+F+T++ A+ + G ++ A+ +Y K+ P + A + +++G+ K G+ ++
Sbjct: 340 IFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF--- 396
Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
C A+ V Y VLID C +GD ++ LF ++ + G+ P +YT I GLC + +
Sbjct: 397 --CIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNL 454
Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
V+A + M + G++ +L Y L+ G + A + + EML+ + P+ F +L
Sbjct: 455 VDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLL 514
Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNC 264
+ K G + AA + + M + G+ + +C
Sbjct: 515 IRAYEKEGNMAAASDLLLDMQRRGLVTAVSDADC 548
Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 97/231 (41%), Gaps = 45/231 (19%)
Query: 348 ALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALID 407
+L + + +G P+ +F+S++ CK G + A + M PDV+ + +LID
Sbjct: 40 SLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLID 99
Query: 408 GLSKDGNMKETLRLYKEMLEAK----ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
G ++G+++ + L E L A P + + +SL +G F ++ + + ++ K
Sbjct: 100 GHCRNGDIR-SASLVLESLRASHGFICKPDIVSFNSLFNG-FSKMKMLDEVFVYMGVMLK 157
Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
CSPN V Y+ I C G++ A K F M+ D L P+ T+T +
Sbjct: 158 C----CSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCL--------- 204
Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
+ GY + GDL+ A + ++ R+
Sbjct: 205 --------------------------IDGYCKAGDLEVAVSLYKEMRRVRM 229
>sp|Q9SV46|PP282_ARATH Pentatricopeptide repeat-containing protein At3g54980,
mitochondrial OS=Arabidopsis thaliana GN=At3g54980 PE=2
SV=1
Length = 851
Score = 247 bits (631), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 154/476 (32%), Positives = 252/476 (52%), Gaps = 9/476 (1%)
Query: 46 EIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDS 102
E P N FS LI F + G +E+AL Y+K+EVL P++ + ++ G +K K +
Sbjct: 368 EGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEE 427
Query: 103 VWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIH 162
+ ++E GL A+V ++ C QG +A L +M +GI P VV Y ++
Sbjct: 428 ALKLFDESFETGL-ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVML 486
Query: 163 GLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP 222
G C + M A +F ++ E G+ PN YTY+ L+DG + D ALE + M N++
Sbjct: 487 GHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEV 546
Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF-PNIFVYNCLIDGHCKAGNLFEAMSL 281
N V + +++GLCKVG+ A +M + + YN +IDG K G + A++
Sbjct: 547 NGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAA 606
Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
EM ISP+V TY L+ GLC +++ A + +M +G+ ++ Y +LIDG+CK
Sbjct: 607 YEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCK 666
Query: 342 EGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVV 401
+ME A ++ S++ E+G+ P+ ++SLI G GN+ AA+ LY +M+ L D+
Sbjct: 667 RSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGT 726
Query: 402 FTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKT 461
+T LIDGL KDGN+ LY EM + P + +++GL K G+ + F E+
Sbjct: 727 YTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMF-EEM 785
Query: 462 DKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRG 517
K + +PN ++Y A+I +G + +A +L +M + PD T+ ++ G
Sbjct: 786 KKNN---VTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 243 bits (619), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 158/550 (28%), Positives = 267/550 (48%), Gaps = 42/550 (7%)
Query: 81 LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
+P+ + +++ +K+G D +EM+ G+ +VV LI C D++ AL
Sbjct: 301 VPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALV 360
Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
LFD+M +G P V +++LI +M +A ++ M G+ P+++ + ++ G+
Sbjct: 361 LFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWL 420
Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
K AL+ + E L NV ++ LCK G+ A M G+ PN+
Sbjct: 421 KGQKHEEALKLFDESFETGL-ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVV 479
Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILI------------------- 301
YN ++ GHC+ N+ A + S + + + P+ +TY+ILI
Sbjct: 480 SYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHM 539
Query: 302 ----------------KGLCGVGQLEGAEGLLQKMYKEGIL-ANVVTYNSLIDGYCKEGD 344
GLC VGQ A LL M +E L + ++YNS+IDG+ KEG+
Sbjct: 540 TSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGE 599
Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
M+ A++ +M G+ PNV+T++SL++G CK +D A+ + EM K + D+ + A
Sbjct: 600 MDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGA 659
Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
LIDG K NM+ L+ E+LE + PS +SLI G G + AL+ + K
Sbjct: 660 LIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLY--KKMLK 717
Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
DG C Y +I L DG ++ AS+L+++M++ L PD YT ++ GL + +
Sbjct: 718 DGLRCDLG--TYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQF 775
Query: 525 LDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRC-SEFLKESRIGSSETEGHT 583
+ V+ + +M K + P+ +I ++ G+ G+L AFR E L + + T
Sbjct: 776 VKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDIL 835
Query: 584 TRSFLGHLKP 593
+G+L+P
Sbjct: 836 VSGQVGNLQP 845
Score = 219 bits (559), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 170/633 (26%), Positives = 278/633 (43%), Gaps = 109/633 (17%)
Query: 49 KFNPSVFSTLIIAFSEMGHIEEALWVYRK---IEVLPAIQACNALLNGLIKKGKFDSVWE 105
+ N F+ L+ A+S+ + A+ + + ++V+P N L+ L+++ E
Sbjct: 160 EVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKE 219
Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
Y MV G+ D VT +L+ + +AL + I++G EP ++Y++ + C
Sbjct: 220 LYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACC 279
Query: 166 NENKMVEAESMFRSMRECGV-VPNLYTY-------------------------------- 192
+ A S+ R M+E + VP+ TY
Sbjct: 280 KTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNV 339
Query: 193 ---NALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVH 249
+L+ G+CK D+ AL + +M PN VTF VL++ K GE+ A F+
Sbjct: 340 VAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKK 399
Query: 250 MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS-PDVFTYNILIKGLCGVG 308
M G+ P++F + +I G K EA+ L E FE +VF N ++ LC G
Sbjct: 400 MEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFD--ESFETGLANVFVCNTILSWLCKQG 457
Query: 309 QLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFS 368
+ + A LL KM GI NVV+YN+++ G+C++ +M+ A V S + EKG++PN T+S
Sbjct: 458 KTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYS 517
Query: 369 SLID-----------------------------------GQCKAGNIDAAMGLYTEMV-I 392
LID G CK G A L M+
Sbjct: 518 ILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEE 577
Query: 393 KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISN 452
K L + + ++IDG K+G M + Y+EM I+P+V T +SL++GL KN R+
Sbjct: 578 KRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQ 637
Query: 453 ALNFFLEKTDK-----------TDGGYC--------------------SPNHVLYAAIIQ 481
AL E +K G+C +P+ +Y ++I
Sbjct: 638 ALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLIS 697
Query: 482 ALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
G ++ A L+ M D LR D TYTT++ GLL+ ++ L +M +G+VP
Sbjct: 698 GFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVP 757
Query: 542 DAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
D +I V+V G + G + E +K++ +
Sbjct: 758 DEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNV 790
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/397 (25%), Positives = 187/397 (47%), Gaps = 6/397 (1%)
Query: 179 SMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVG 238
S + G N +N L++ Y K + A++ ++ML ++ P + L +
Sbjct: 153 SAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRN 212
Query: 239 ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYN 298
L A + M GV + L+ + EA+ + S + PD Y+
Sbjct: 213 SLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYS 272
Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGI-LANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
+ ++ C L A LL++M ++ + + + TY S+I K+G+M+ A+ + +M
Sbjct: 273 LAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLS 332
Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
G+ NVV +SLI G CK ++ +A+ L+ +M + P+ V F+ LI+ K+G M++
Sbjct: 333 DGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEK 392
Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYA 477
L YK+M +TPSVF V ++I G K + AL F E + G N +
Sbjct: 393 ALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFET---GLA--NVFVCN 447
Query: 478 AIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKM 537
I+ LC G+ +A++L S M S + P+ +Y ++ G R K M ++ +++++
Sbjct: 448 TILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEK 507
Query: 538 GIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRI 574
G+ P+ +++ G N D ++A + S I
Sbjct: 508 GLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNI 544
Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 116/447 (25%), Positives = 191/447 (42%), Gaps = 14/447 (3%)
Query: 115 LVADVVTYG----VLIDCCCGQGDVMKALNLFDEMIDK----GIEPTVVIYTILIHGLCN 166
LV+ TYG +LI A L +++D G E + L++
Sbjct: 116 LVSSPETYGRASDLLIRYVSTSNPTPMASVLVSKLVDSAKSFGFEVNSRAFNYLLNAYSK 175
Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
+ + A + M E V+P N + + + A E Y M+ + + VT
Sbjct: 176 DRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVT 235
Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM- 285
+LM + + A + G P+ +Y+ + CK +L A SL EM
Sbjct: 236 TQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMK 295
Query: 286 EKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM 345
EK P TY +I G ++ A L +M +GI NVV SLI G+CK D+
Sbjct: 296 EKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDL 355
Query: 346 EKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTAL 405
AL + +M ++G PN VTFS LI+ K G ++ A+ Y +M + L P V +
Sbjct: 356 VSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTI 415
Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
I G K +E L+L+ E E + +VF ++++ L K G+ A K +
Sbjct: 416 IQGWLKGQKHEEALKLFDESFETGLA-NVFVCNTILSWLCKQGKTDEATELL----SKME 470
Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRML 525
PN V Y ++ C + A +FS++ L+P+N TY+ ++ G R
Sbjct: 471 SRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQ 530
Query: 526 DVMMLLADMIKMGIVPDAVINQVMVRG 552
+ + ++ M I + V+ Q ++ G
Sbjct: 531 NALEVVNHMTSSNIEVNGVVYQTIING 557
Score = 69.7 bits (169), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 118/276 (42%), Gaps = 7/276 (2%)
Query: 324 GILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAA 383
G N +N L++ Y K+ + A+ + +QM E V P + + + ++ A
Sbjct: 158 GFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEA 217
Query: 384 MGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHG 443
LY+ MV + D V L+ ++ E L + +E P S +
Sbjct: 218 KELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQA 277
Query: 444 LFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDN 503
K ++ A + E +K C P+ Y ++I A G + A +L +M SD
Sbjct: 278 CCKTLDLAMANSLLREMKEKK---LCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDG 334
Query: 504 LRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
+ + T+++ G + ++ ++L M K G P++V V++ +++NG+++ A
Sbjct: 335 ISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKAL 394
Query: 564 RCSEFLKESRI-GSSETEGHTTRSFLGHLKPTVYKE 598
EF K+ + G + + H G LK ++E
Sbjct: 395 ---EFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEE 427
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 67/126 (53%), Gaps = 3/126 (2%)
Query: 54 VFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
++TLI + G++ A +Y +++ ++P ++NGL KKG+F V + +EEM
Sbjct: 726 TYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEM 785
Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
+ +V+ Y +I +G++ +A L DEM+DKGI P + IL+ G +
Sbjct: 786 KKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGQVGNLQP 845
Query: 171 VEAESM 176
V A S+
Sbjct: 846 VRAASL 851
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 246 bits (628), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 135/436 (30%), Positives = 232/436 (53%), Gaps = 18/436 (4%)
Query: 81 LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
LP+I + LL+ + K K+D V +E+M + G+ ++ T +L++C C + AL+
Sbjct: 78 LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALS 137
Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
+MI G EP++V + L++G C +++ +A MF M G PN+ YN ++DG C
Sbjct: 138 FLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLC 197
Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
K V+ AL+ + M + P+VVT+ L+ GLC G A M K ++P++F
Sbjct: 198 KSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVF 257
Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
+N LID K G + EA EM + + PD+ TY++LI GLC +L+ AE + M
Sbjct: 258 TFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFM 317
Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
+G +VVTY+ LI+GYCK +E + + +M+++GV N VT++ LI G C+AG +
Sbjct: 318 VSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKL 377
Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
+ A ++ MV + P+++ + L+ GL +G +++ L + +M + + + T + +
Sbjct: 378 NVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNII 437
Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCS-------PNHVLYAAIIQALCYDGQILKAS 493
I G+ K G +++A + YCS P+ Y ++ L G +A
Sbjct: 438 IRGMCKAGEVADAWDI-----------YCSLNCQGLMPDIWTYTTMMLGLYKKGLRREAD 486
Query: 494 KLFSDMRSDNLRPDNC 509
LF M+ D + P+ C
Sbjct: 487 ALFRKMKEDGILPNEC 502
Score = 224 bits (571), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 134/443 (30%), Positives = 229/443 (51%), Gaps = 8/443 (1%)
Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
+L+LF M+ P++ ++ L+ + K ++ M+ G+ NL T N L++
Sbjct: 65 SLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLN 124
Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
+C+ + ++ AL F +M+ +P++VTFG L++G C+ + A F M G P
Sbjct: 125 CFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKP 184
Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
N+ +YN +IDG CK+ + A+ L + MEK I PDV TYN LI GLC G+ A ++
Sbjct: 185 NVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMV 244
Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
M K I +V T+N+LID KEG + +A +M + ++P++VT+S LI G C
Sbjct: 245 SCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMY 304
Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
+D A ++ MV K PDVV ++ LI+G K ++ ++L+ EM + + + T
Sbjct: 305 SRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTY 364
Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS--PNHVLYAAIIQALCYDGQILKASKL 495
+ LI G + G+++ A F +C PN + Y ++ LC +G+I KA +
Sbjct: 365 TILIQGYCRAGKLNVAEEIFRRMV------FCGVHPNIITYNVLLHGLCDNGKIEKALVI 418
Query: 496 FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQE 555
+DM+ + + D TY ++RG+ +A + D + + G++PD M+ G +
Sbjct: 419 LADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYK 478
Query: 556 NGDLKSAFRCSEFLKESRIGSSE 578
G + A +KE I +E
Sbjct: 479 KGLRREADALFRKMKEDGILPNE 501
Score = 173 bits (439), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 179/372 (48%), Gaps = 4/372 (1%)
Query: 192 YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
Y ++ + ++ +L+ + M+ P++ F L+ + K+ + + M
Sbjct: 49 YREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108
Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
G+ N+ N L++ C+ L A+S +M K P + T+ L+ G C ++
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVY 168
Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
A + +M G NVV YN++IDG CK ++ AL + ++M + G+ P+VVT++SLI
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228
Query: 372 DGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT 431
G C +G A + + M + + PDV F ALID K+G + E Y+EM+ +
Sbjct: 229 SGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD 288
Query: 432 PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILK 491
P + T S LI+GL R+ A F K C P+ V Y+ +I C ++
Sbjct: 289 PDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKG----CFPDVVTYSILINGYCKSKKVEH 344
Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVR 551
KLF +M + + TYT +++G RA ++ + M+ G+ P+ + V++
Sbjct: 345 GMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLH 404
Query: 552 GYQENGDLKSAF 563
G +NG ++ A
Sbjct: 405 GLCDNGKIEKAL 416
Score = 172 bits (436), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 105/323 (32%), Positives = 165/323 (51%), Gaps = 9/323 (2%)
Query: 11 YKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSV--FSTLIIAFSEMGHI 68
YK + + + L KS++ + + LN +E P V +++LI G
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNA----LDLLNRMEKDGIGPDVVTYNSLISGLCSSGRW 237
Query: 69 EEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVL 125
+A + K E+ P + NAL++ +K+G+ EFYEEM+ L D+VTY +L
Sbjct: 238 SDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLL 297
Query: 126 IDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGV 185
I C + +A +F M+ KG P VV Y+ILI+G C K+ +F M + GV
Sbjct: 298 IYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGV 357
Query: 186 VPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGN 245
V N TY L+ GYC+ +N A E + M+ + PN++T+ VL+ GLC G++ A
Sbjct: 358 VRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALV 417
Query: 246 FFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
M K G+ +I YN +I G CKAG + +A + + + PD++TY ++ GL
Sbjct: 418 ILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLY 477
Query: 306 GVGQLEGAEGLLQKMYKEGILAN 328
G A+ L +KM ++GIL N
Sbjct: 478 KKGLRREADALFRKMKEDGILPN 500
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 246 bits (627), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 143/463 (30%), Positives = 249/463 (53%), Gaps = 14/463 (3%)
Query: 47 IPKFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSV 103
I +F FST S M ++EE + ++ K+ LP+I + +L+ + K +D V
Sbjct: 33 ISRFWGRTFST---KRSSM-NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLV 88
Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
+ M +CG+ D+ +Y ++I+C C + AL++ +M+ G EP VV + LI+G
Sbjct: 89 ISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLING 148
Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
C N++ +A + M E G P++ YN ++DG CK+ VN A+E + M ++ +
Sbjct: 149 FCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRAD 208
Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
VT+ L+ GLC G A M + PN+ + +ID K G EAM L
Sbjct: 209 AVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYE 268
Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
EM + + PDVFTYN LI GLC G+++ A+ +L M +G L +VVTYN+LI+G+CK
Sbjct: 269 EMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSK 328
Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
+++ + +M ++G+ + +T++++I G +AG DAA +++ M + P++ ++
Sbjct: 329 RVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYS 385
Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
L+ GL + +++ L L++ M +++I + T + +IHG+ K G + +A + F + K
Sbjct: 386 ILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCK 445
Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRP 506
P+ V Y +I C Q K+ L+ M+ D L P
Sbjct: 446 G----LKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 224 bits (571), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 123/415 (29%), Positives = 215/415 (51%), Gaps = 7/415 (1%)
Query: 139 LNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDG 198
++LF +MI P++V ++ ++ + S+F M CG+ +LY+YN +++
Sbjct: 54 IDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINC 113
Query: 199 YCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPN 258
C+ + AL +M+ +P+VVT L++G C+ + A + M + G P+
Sbjct: 114 LCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPD 173
Query: 259 IFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
+ +YN +IDG CK G + +A+ L ME+ + D TYN L+ GLC G+ A L++
Sbjct: 174 VVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMR 233
Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
M I+ NV+T+ ++ID + KEG +A+ + +MT + V+P+V T++SLI+G C G
Sbjct: 234 DMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHG 293
Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
+D A + MV K +PDVV + LI+G K + E +L++EM + + T +
Sbjct: 294 RVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYN 353
Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
++I G F+ GR A F + PN Y+ ++ LC + ++ KA LF +
Sbjct: 354 TIIQGYFQAGRPDAAQEIFSRMDSR-------PNIRTYSILLYGLCMNWRVEKALVLFEN 406
Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
M+ + D TY ++ G+ + + D L + G+ PD V M+ G+
Sbjct: 407 MQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGF 461
Score = 187 bits (476), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 197/392 (50%), Gaps = 7/392 (1%)
Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
E +F M + +P++ ++ ++ K + + + +H M + ++ ++ +++
Sbjct: 52 EEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVI 111
Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
+ LC+ A + M KFG P++ + LI+G C+ +F+A+ L S+ME+
Sbjct: 112 NCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFR 171
Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
PDV YN +I G C +G + A L +M ++G+ A+ VTYNSL+ G C G A +
Sbjct: 172 PDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARL 231
Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
M + + PNV+TF+++ID K G AM LY EM + + PDV + +LI+GL
Sbjct: 232 MRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCM 291
Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
G + E ++ M+ P V T ++LI+G K+ R+ F E + G
Sbjct: 292 HGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVG---- 347
Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
+ + Y IIQ G+ A ++FS M S RP+ TY+ +L GL R+ ++L
Sbjct: 348 DTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLF 404
Query: 532 ADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
+M K I D +++ G + G+++ A+
Sbjct: 405 ENMQKSEIELDITTYNIVIHGMCKIGNVEDAW 436
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 109/224 (48%), Gaps = 4/224 (1%)
Query: 344 DMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFT 403
++E+ + + +M + P++V FS ++ K+ N D + L+ M + + D+ +
Sbjct: 49 NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYN 108
Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
+I+ L + L + +M++ P V TVSSLI+G + R+ +A++ +
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLV---SKM 165
Query: 464 TDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
+ G+ P+ V+Y II C G + A +LF M D +R D TY +++ GL + R
Sbjct: 166 EEMGF-RPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGR 224
Query: 524 MLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSE 567
D L+ DM+ IVP+ + ++ + + G A + E
Sbjct: 225 WSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYE 268
Score = 79.3 bits (194), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 119/253 (47%), Gaps = 4/253 (1%)
Query: 310 LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
LE L KM + L ++V ++ ++ K + + +S+ M G+ ++ +++
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
+I+ C+ A+ + +M+ PDVV ++LI+G + + + + L +M E
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
P V +++I G K G +++A+ F D+ + + V Y +++ LC G+
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELF----DRMERDGVRADAVTYNSLVAGLCCSGRW 225
Query: 490 LKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
A++L DM ++ P+ T+T ++ ++ + + M L +M + + PD +
Sbjct: 226 SDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSL 285
Query: 550 VRGYQENGDLKSA 562
+ G +G + A
Sbjct: 286 INGLCMHGRVDEA 298
>sp|Q9C6S6|PPR67_ARATH Putative pentatricopeptide repeat-containing protein At1g31840
OS=Arabidopsis thaliana GN=At1g31840 PE=2 SV=2
Length = 840
Score = 244 bits (624), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 152/540 (28%), Positives = 264/540 (48%), Gaps = 42/540 (7%)
Query: 48 PKFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVW 104
P N F TLI F + G ++ A +++ +E + P + A + L++G K G
Sbjct: 282 PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGH 341
Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
+ + + + G+ DVV + ID GD+ A ++ M+ +GI P VV YTILI GL
Sbjct: 342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL 401
Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
C + ++ EA M+ + + G+ P++ TY++L+DG+CK ++ Y +M+ P+V
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDV 461
Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
V +GVL+DGL K G + A F V M + N+ V+N LIDG C+ EA+ +
Sbjct: 462 VIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRL 521
Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK--- 341
M + I PDV T+ +++ G+LE A L +M+K G+ + + Y +LID +CK
Sbjct: 522 MGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMK 581
Query: 342 ------------EGDMEKALSVC--------------------SQMTEKGVEPNVVTFSS 369
+ ++VC + + E +EP++VT+++
Sbjct: 582 PTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNT 641
Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
+I G C +D A ++ + + P+ V T LI L K+ +M +R++ M E
Sbjct: 642 MICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKG 701
Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
P+ T L+ K+ I + F E +K SP+ V Y+ II LC G++
Sbjct: 702 SKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKG----ISPSIVSYSIIIDGLCKRGRV 757
Query: 490 LKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
+A+ +F L PD Y ++RG + R+++ +L M++ G+ PD ++ + +
Sbjct: 758 DEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 817
Score = 231 bits (589), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 150/497 (30%), Positives = 250/497 (50%), Gaps = 9/497 (1%)
Query: 83 AIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLF 142
I +CN +L GL + + ++ CG +VVT+ LI+ C +G++ +A +LF
Sbjct: 251 GIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLF 309
Query: 143 DEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKV 202
M +GIEP ++ Y+ LI G + +F GV ++ +++ +D Y K
Sbjct: 310 KVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKS 369
Query: 203 ADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVY 262
D+ A Y ML + PNVVT+ +L+ GLC+ G + A + + K G+ P+I Y
Sbjct: 370 GDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTY 429
Query: 263 NCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYK 322
+ LIDG CK GNL +L +M K PDV Y +L+ GL G + A KM
Sbjct: 430 SSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLG 489
Query: 323 EGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDA 382
+ I NVV +NSLIDG+C+ ++AL V M G++P+V TF++++ G ++
Sbjct: 490 QSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEE 549
Query: 383 AMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET--LRLYKEMLEAKITPSVFTVSSL 440
A+ L+ M L PD + + LID K +MK T L+L+ M KI+ + + +
Sbjct: 550 ALFLFFRMFKMGLEPDALAYCTLIDAFCK--HMKPTIGLQLFDLMQRNKISADIAVCNVV 607
Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
IH LFK RI +A FF + G P+ V Y +I C ++ +A ++F ++
Sbjct: 608 IHLLFKCHRIEDASKFFNNLIE----GKMEPDIVTYNTMICGYCSLRRLDEAERIFELLK 663
Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
P+ T T ++ L + M + + + M + G P+AV ++ + ++ D++
Sbjct: 664 VTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIE 723
Query: 561 SAFRCSEFLKESRIGSS 577
+F+ E ++E I S
Sbjct: 724 GSFKLFEEMQEKGISPS 740
Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 163/623 (26%), Positives = 271/623 (43%), Gaps = 91/623 (14%)
Query: 39 FNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKG 98
FN L+S + N T ++ S AL +R E+ + + + LI+ G
Sbjct: 55 FNLLDS-SVYGSNLQRNETNLVLLSLESEPNSALKYFRWAEISGKDPSFYTIAHVLIRNG 113
Query: 99 KFDSVWEFYEEMVLC--------------GLVADVVTYGVLIDCCCGQGDVMKALNL--- 141
FD + ++EM+ L ADV + L++CCC G V KAL +
Sbjct: 114 MFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADVCKF--LMECCCRYGMVDKALEIFVY 171
Query: 142 --------------------------------FDEMIDKGIEPT---------------- 153
FD++ GIEP+
Sbjct: 172 STQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKG 231
Query: 154 VVIYTILIHGLCNE----------NKMVE---------AESMFRSMRECGVVPNLYTYNA 194
V + H L E NK+++ A + + +CG PN+ T+
Sbjct: 232 EVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCT 291
Query: 195 LMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFG 254
L++G+CK +++RA + + M ++P+++ + L+DG K G L F G
Sbjct: 292 LINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKG 351
Query: 255 VFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
V ++ V++ ID + K+G+L A + M ISP+V TY ILIKGLC G++ A
Sbjct: 352 VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAF 411
Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
G+ ++ K G+ ++VTY+SLIDG+CK G++ ++ M + G P+VV + L+DG
Sbjct: 412 GMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGL 471
Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
K G + AM +M+ +S+ +VVVF +LIDG + E L++++ M I P V
Sbjct: 472 SKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDV 531
Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
T ++++ GR+ AL F P+ + Y +I A C + +
Sbjct: 532 ATFTTVMRVSIMEGRLEEALFLFFRMFKMG----LEPDALAYCTLIDAFCKHMKPTIGLQ 587
Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
LF M+ + + D ++ L + R+ D ++I+ + PD V M+ GY
Sbjct: 588 LFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYC 647
Query: 555 ENGDLKSAFRCSEFLKESRIGSS 577
L A R E LK + G +
Sbjct: 648 SLRRLDEAERIFELLKVTPFGPN 670
>sp|P0C7Q9|PPR56_ARATH Pentatricopeptide repeat-containing protein At1g22960,
mitochondrial OS=Arabidopsis thaliana GN=At1g22960 PE=2
SV=1
Length = 718
Score = 243 bits (619), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 148/527 (28%), Positives = 247/527 (46%), Gaps = 48/527 (9%)
Query: 81 LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
LP+++ CN +L L + YE M+ G++ V+T+ ++D C GD+ +
Sbjct: 200 LPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDK 259
Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
++ EM + IE + V Y ILI+G KM EA MR G Y++N L++GYC
Sbjct: 260 IWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYC 319
Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
K + A EML+ + P T+ + + LC G + A MA P++
Sbjct: 320 KQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAA----PDVV 375
Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
YN L+ G+ K G EA L ++ +I P + TYN LI GLC G LEGA+ L ++M
Sbjct: 376 SYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEM 435
Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
+ I +V+TY +L+ G+ K G++ A V +M KG++P+ +++ G+ + G+
Sbjct: 436 TTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDS 495
Query: 381 DAAMGLYTEMVIKS------------------------------------LVPDVVVFTA 404
D A L+ EMV LVPD V +T
Sbjct: 496 DKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTT 555
Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKT 464
+I G ++G K LY EML ++ PSV T LI+G K GR+ A + E +
Sbjct: 556 VIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRG 615
Query: 465 DGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRM 524
PN + + A++ +C G I +A + M + + P+ +YT ++ ++
Sbjct: 616 ----VRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKW 671
Query: 525 LDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
+V+ L +M+ I PD ++ + + +++ + + EFL+
Sbjct: 672 EEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESREV----EFLER 714
Score = 223 bits (569), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 132/430 (30%), Positives = 226/430 (52%), Gaps = 7/430 (1%)
Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
F++MI KG P+V I++ L + M +A +++ +M E G++P + T+N ++D K
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 250
Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
D+ R + + EM N++ + VT+ +L++G K G++ A F M + G +
Sbjct: 251 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYS 310
Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
+N LI+G+CK G +A + EM I P TYNI I LC G+++ A LL M
Sbjct: 311 FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM- 369
Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
+VV+YN+L+ GY K G +A + + + P++VT+++LIDG C++GN++
Sbjct: 370 ---AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLE 426
Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
A L EM + + PDV+ +T L+ G K+GN+ +Y EML I P + ++
Sbjct: 427 GAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRA 486
Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
G + G A E+ TD + +P+ +Y I LC G ++KA + +
Sbjct: 487 VGELRLGDSDKAFRLH-EEMVATD--HHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFR 543
Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKS 561
L PD+ TYTT++RG L + L +M++ + P + V++ G+ + G L+
Sbjct: 544 VGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQ 603
Query: 562 AFRCSEFLKE 571
AF+ S +K+
Sbjct: 604 AFQYSTEMKK 613
Score = 217 bits (553), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 140/522 (26%), Positives = 240/522 (45%), Gaps = 47/522 (9%)
Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTV------------ 154
+E+M+ G + V +++ + KA +++ MI+ GI PTV
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 250
Query: 155 -----------------------VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYT 191
V Y ILI+G KM EA MR G Y+
Sbjct: 251 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYS 310
Query: 192 YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
+N L++GYCK + A EML+ + P T+ + + LC G + A MA
Sbjct: 311 FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA 370
Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
P++ YN L+ G+ K G EA L ++ +I P + TYN LI GLC G LE
Sbjct: 371 A----PDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLE 426
Query: 312 GAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLI 371
GA+ L ++M + I +V+TY +L+ G+ K G++ A V +M KG++P+ +++
Sbjct: 427 GAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRA 486
Query: 372 DGQCKAGNIDAAMGLYTEMV-IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI 430
G+ + G+ D A L+ EMV PD+ ++ IDGL K GN+ + + +++ +
Sbjct: 487 VGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGL 546
Query: 431 TPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQIL 490
P T +++I G +NG+ A N + E K P+ + Y +I G++
Sbjct: 547 VPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKR----LYPSVITYFVLIYGHAKAGRLE 602
Query: 491 KASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
+A + ++M+ +RP+ T+ +L G+ +A + + L M + GI P+ +++
Sbjct: 603 QAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLI 662
Query: 551 RGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLGHLK 592
+N D + + KE E +G+T R+ HL+
Sbjct: 663 ---SKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLE 701
Score = 203 bits (517), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 125/397 (31%), Positives = 200/397 (50%), Gaps = 8/397 (2%)
Query: 49 KFNPSVFSTLIIAFSEMGHIEEALWVY---RKIEVLPAIQACNALLNGLIKKGKFDSVWE 105
+F+ ++ LI FS+ G +EEA + R+ + N L+ G K+G FD W
Sbjct: 270 EFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWG 329
Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
+EM+ G+ TY + I C G + A L M P VV Y L+HG
Sbjct: 330 VTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA----APDVVSYNTLMHGYI 385
Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
K VEA +F +R + P++ TYN L+DG C+ ++ A EM + P+V+
Sbjct: 386 KMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVI 445
Query: 226 TFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEM 285
T+ L+ G K G L A + M + G+ P+ + Y G + G+ +A L EM
Sbjct: 446 TYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEM 505
Query: 286 EKFEI-SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
+ +PD+ YN+ I GLC VG L A +K+++ G++ + VTY ++I GY + G
Sbjct: 506 VATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQ 565
Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTA 404
+ A ++ +M K + P+V+T+ LI G KAG ++ A TEM + + P+V+ A
Sbjct: 566 FKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNA 625
Query: 405 LIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
L+ G+ K GN+ E R +M E I P+ ++ + LI
Sbjct: 626 LLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLI 662
Score = 193 bits (490), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 114/368 (30%), Positives = 185/368 (50%), Gaps = 6/368 (1%)
Query: 53 SVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVL 112
S ++ I A + G I++A + + P + + N L++G IK GKF ++++
Sbjct: 344 STYNIYICALCDFGRIDDARELLSSMAA-PDVVSYNTLMHGYIKMGKFVEASLLFDDLRA 402
Query: 113 CGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVE 172
+ +VTY LID C G++ A L +EM + I P V+ YT L+ G +
Sbjct: 403 GDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSM 462
Query: 173 AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML---HHNLQPNVVTFGV 229
A ++ M G+ P+ Y Y G ++ D ++A + EM+ HH P++ + V
Sbjct: 463 ATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHH--APDLTIYNV 520
Query: 230 LMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFE 289
+DGLCKVG L A F + + G+ P+ Y +I G+ + G A +L EM +
Sbjct: 521 RIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKR 580
Query: 290 ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL 349
+ P V TY +LI G G+LE A +M K G+ NV+T+N+L+ G CK G++++A
Sbjct: 581 LYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAY 640
Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
+M E+G+ PN +++ LI C + + LY EM+ K + PD AL L
Sbjct: 641 RYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHL 700
Query: 410 SKDGNMKE 417
KD +E
Sbjct: 701 EKDHESRE 708
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 240 bits (613), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 141/489 (28%), Positives = 237/489 (48%), Gaps = 46/489 (9%)
Query: 107 YEEMVLCG---LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
Y M G + D+ TYG+LI CCC G + +I KG + +T L+ G
Sbjct: 72 YNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKG 131
Query: 164 LCNENKMVEA-ESMFRSMRECGVVPNLYTYNALMDGYC---------------------- 200
LC + + +A + + R M E G +PN+++YN L+ G C
Sbjct: 132 LCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGG 191
Query: 201 ----------------KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAG 244
K D ++A YHEML + P+VVT+ ++ LCK + A
Sbjct: 192 SPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAM 251
Query: 245 NFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGL 304
M K GV P+ YN ++ G+C +G EA+ +M + PDV TY++L+ L
Sbjct: 252 EVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYL 311
Query: 305 CGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNV 364
C G+ A + M K G+ + TY +L+ GY +G + + + M G+ P+
Sbjct: 312 CKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDH 371
Query: 365 VTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKE 424
FS LI K G +D AM ++++M + L P+ V + A+I L K G +++ + +++
Sbjct: 372 YVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQ 431
Query: 425 MLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALC 484
M++ ++P +SLIHGL + A LE D+ G C N + + +II + C
Sbjct: 432 MIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDR---GIC-LNTIFFNSIIDSHC 487
Query: 485 YDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAV 544
+G+++++ KLF M ++P+ TY T++ G A +M + M LL+ M+ +G+ P+ V
Sbjct: 488 KEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTV 547
Query: 545 INQVMVRGY 553
++ GY
Sbjct: 548 TYSTLINGY 556
Score = 237 bits (604), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 147/499 (29%), Positives = 251/499 (50%), Gaps = 7/499 (1%)
Query: 55 FSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEMV 111
++T+I F + G ++A Y ++ +LP + N+++ L K D E MV
Sbjct: 199 YTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMV 258
Query: 112 LCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMV 171
G++ D +TY ++ C G +A+ +M G+EP VV Y++L+ LC + +
Sbjct: 259 KNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCM 318
Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
EA +F SM + G+ P + TY L+ GY + M+ + + P+ F +L+
Sbjct: 319 EARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILI 378
Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
K G++ A F M + G+ PN Y +I CK+G + +AM +M +S
Sbjct: 379 CAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLS 438
Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
P YN LI GLC + E AE L+ +M GI N + +NS+ID +CKEG + ++ +
Sbjct: 439 PGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKL 498
Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
M GV+PNV+T+++LI+G C AG +D AM L + MV L P+ V ++ LI+G K
Sbjct: 499 FELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCK 558
Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
M++ L L+KEM + ++P + T + ++ GLF+ R + A ++ T+ S
Sbjct: 559 ISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELST 618
Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
Y I+ LC + A ++F ++ +L+ + T+ M+ LL+ R + L
Sbjct: 619 ----YNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLF 674
Query: 532 ADMIKMGIVPDAVINQVMV 550
G+VP+ ++M
Sbjct: 675 VAFSSNGLVPNYWTYRLMA 693
Score = 234 bits (596), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 142/450 (31%), Positives = 229/450 (50%), Gaps = 15/450 (3%)
Query: 81 LPAIQACNALLNGLIKKGKFDSVWEFYEEMVL---CGLVADVVTYGVLIDCCCGQGDVMK 137
+P + + N LL GL + + E M G DVV+Y +I+ +GD K
Sbjct: 155 IPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDK 214
Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
A + + EM+D+GI P VV Y +I LC M +A + +M + GV+P+ TYN+++
Sbjct: 215 AYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILH 274
Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
GYC A+ F +M ++P+VVT+ +LMD LCK G A F M K G+ P
Sbjct: 275 GYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKP 334
Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
I Y L+ G+ G L E L M + I PD + ++ILI G+++ A +
Sbjct: 335 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVF 394
Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
KM ++G+ N VTY ++I CK G +E A+ QM ++G+ P + ++SLI G C
Sbjct: 395 SKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTC 454
Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
+ A L EM+ + + + + F ++ID K+G + E+ +L++ M+ + P+V T
Sbjct: 455 NKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITY 514
Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS----PNHVLYAAIIQALCYDGQILKAS 493
++LI+G G++ A+ G S PN V Y+ +I C ++ A
Sbjct: 515 NTLINGYCLAGKMDEAMKLL--------SGMVSVGLKPNTVTYSTLINGYCKISRMEDAL 566
Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKR 523
LF +M S + PD TY +L+GL + +R
Sbjct: 567 VLFKEMESSGVSPDIITYNIILQGLFQTRR 596
Score = 232 bits (592), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 136/469 (28%), Positives = 235/469 (50%), Gaps = 4/469 (0%)
Query: 82 PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
P + + ++NG K+G D + Y EM+ G++ DVVTY +I C + KA+ +
Sbjct: 194 PDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEV 253
Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
+ M+ G+ P + Y ++HG C+ + EA + MR GV P++ TY+ LMD CK
Sbjct: 254 LNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCK 313
Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
A + + M L+P + T+G L+ G G L M + G+ P+ +V
Sbjct: 314 NGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYV 373
Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
++ LI + K G + +AM + S+M + ++P+ TY +I LC G++E A ++M
Sbjct: 374 FSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMI 433
Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
EG+ + YNSLI G C E+A + +M ++G+ N + F+S+ID CK G +
Sbjct: 434 DEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVI 493
Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLI 441
+ L+ MV + P+V+ + LI+G G M E ++L M+ + P+ T S+LI
Sbjct: 494 ESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLI 553
Query: 442 HGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS 501
+G K R+ +AL F E + SP+ + Y I+Q L + A +L+ +
Sbjct: 554 NGYCKISRMEDALVLFKE----MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITE 609
Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
+ + TY +L GL + K D + + ++ M + +A +M+
Sbjct: 610 SGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMI 658
Score = 229 bits (585), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 157/552 (28%), Positives = 261/552 (47%), Gaps = 18/552 (3%)
Query: 54 VFSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
++++I A + +++A+ V K V+P N++L+G G+ F ++M
Sbjct: 233 TYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKM 292
Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
G+ DVVTY +L+D C G M+A +FD M +G++P + Y L+ G + +
Sbjct: 293 RSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGAL 352
Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
VE + M G+ P+ Y ++ L+ Y K V++A+ + +M L PN VT+G +
Sbjct: 353 VEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAV 412
Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
+ LCK G + A +F M G+ P VYN LI G C A L EM I
Sbjct: 413 IGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGI 472
Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
+ +N +I C G++ +E L + M + G+ NV+TYN+LI+GYC G M++A+
Sbjct: 473 CLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMK 532
Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
+ S M G++PN VT+S+LI+G CK ++ A+ L+ EM + PD++ + ++ GL
Sbjct: 533 LLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLF 592
Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
+ LY + E+ + T + ++HGL KN +AL F C
Sbjct: 593 QTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQN--------LCL 644
Query: 471 PNHVLYAA----IIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLD 526
+ L A +I AL G+ +A LF S+ L P+ TY M ++ + +
Sbjct: 645 MDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEE 704
Query: 527 VMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRS 586
+ L M G D+ + +VR + G++ A + E E T
Sbjct: 705 LDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHF---SLEASTASL 761
Query: 587 FLGHLKPTVYKE 598
F+ L Y+E
Sbjct: 762 FIDLLSGGKYQE 773
Score = 96.3 bits (238), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 122/274 (44%), Gaps = 9/274 (3%)
Query: 311 EGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKG---VEPNVVTF 367
E A + ++ + G A++ N + ++ A+S ++M G V P++ T+
Sbjct: 32 EDARHVFDELLRRGRGASIYGLNRALADVARDSP-AAAVSRYNRMARAGADEVTPDLCTY 90
Query: 368 SSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL-YKEML 426
LI C+AG +D ++ K D + FT L+ GL D + + + + M
Sbjct: 91 GILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 150
Query: 427 EAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYD 486
E P+VF+ + L+ GL R AL D GG P+ V Y +I +
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGG-SPPDVVSYTTVINGFFKE 209
Query: 487 GQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVIN 546
G KA + +M + PD TY +++ L +A+ M M +L M+K G++PD +
Sbjct: 210 GDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTY 269
Query: 547 QVMVRGYQENGDLKSAFRCSEFLKESRIGSSETE 580
++ GY +G K A FLK+ R E +
Sbjct: 270 NSILHGYCSSGQPKEAI---GFLKKMRSDGVEPD 300
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 89/202 (44%), Gaps = 3/202 (1%)
Query: 49 KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWE 105
K N +STLI + ++ +E+AL +++++E V P I N +L GL + + + E
Sbjct: 543 KPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKE 602
Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
Y + G ++ TY +++ C AL +F + ++ + I+I L
Sbjct: 603 LYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALL 662
Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVV 225
+ EA+ +F + G+VPN +TY + + + + + M + +
Sbjct: 663 KVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSG 722
Query: 226 TFGVLMDGLCKVGELRAAGNFF 247
++ L + GE+ AG +
Sbjct: 723 MLNFIVRELLQRGEITRAGTYL 744
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 240 bits (613), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 140/436 (32%), Positives = 226/436 (51%), Gaps = 4/436 (0%)
Query: 81 LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
+P+I +L + K KFD V Y +M G+ D+ ++ +LI C C + AL
Sbjct: 76 IPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALA 135
Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
L +M+ G P++V L++G C N+ EA S+ SM G VPN+ YN +++G C
Sbjct: 136 LLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLC 195
Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
K D+N ALE ++ M ++ + VT+ L+ GL G A M K + PN+
Sbjct: 196 KNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVI 255
Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
+ LID K GNL EA +L EM + + P+VFTYN LI G C G L A+ + M
Sbjct: 256 FFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLM 315
Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
+G +VVTYN+LI G+CK +E + + +MT +G+ + T+++LI G C+AG +
Sbjct: 316 VSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKL 375
Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
+ A ++ MV + PD+V + L+D L +G +++ L + +++ ++++ + T + +
Sbjct: 376 NVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNII 435
Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
I GL + ++ A F T K P+ + Y +I LC G +A KL M+
Sbjct: 436 IQGLCRTDKLKEAWCLFRSLTRKG----VKPDAIAYITMISGLCRKGLQREADKLCRRMK 491
Query: 501 SDNLRPDNCTYTTMLR 516
D P Y LR
Sbjct: 492 EDGFMPSERIYDETLR 507
Score = 221 bits (563), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 135/441 (30%), Positives = 228/441 (51%), Gaps = 4/441 (0%)
Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
A +LF EM+ P++V +T ++ + NK ++ M G+ +LY++ L+
Sbjct: 63 AFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIH 122
Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
+C+ + ++ AL +M+ +P++VT G L++G C+ + A + M FG P
Sbjct: 123 CFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVP 182
Query: 258 NIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLL 317
N+ +YN +I+G CK +L A+ + MEK I D TYN LI GL G+ A LL
Sbjct: 183 NVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLL 242
Query: 318 QKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKA 377
+ M K I NV+ + +LID + KEG++ +A ++ +M + V PNV T++SLI+G C
Sbjct: 243 RDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIH 302
Query: 378 GNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTV 437
G + A ++ MV K PDVV + LI G K +++ ++L+ EM + FT
Sbjct: 303 GCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTY 362
Query: 438 SSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFS 497
++LIHG + G+++ A F D SP+ V Y ++ LC +G+I KA +
Sbjct: 363 NTLIHGYCQAGKLNVAQKVFNRMVDCG----VSPDIVTYNILLDCLCNNGKIEKALVMVE 418
Query: 498 DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENG 557
D++ + D TY +++GL R ++ + L + + G+ PDA+ M+ G G
Sbjct: 419 DLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKG 478
Query: 558 DLKSAFRCSEFLKESRIGSSE 578
+ A + +KE SE
Sbjct: 479 LQREADKLCRRMKEDGFMPSE 499
Score = 207 bits (528), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 181/357 (50%)
Query: 77 KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVM 136
K+ P+I +LLNG + +F + M G V +VV Y +I+ C D+
Sbjct: 142 KLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLN 201
Query: 137 KALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
AL +F M KGI V Y LI GL N + +A + R M + + PN+ + AL+
Sbjct: 202 NALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALI 261
Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
D + K ++ A Y EM+ ++ PNV T+ L++G C G L A F M G F
Sbjct: 262 DTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCF 321
Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
P++ YN LI G CK+ + + M L EM + D FTYN LI G C G+L A+ +
Sbjct: 322 PDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKV 381
Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
+M G+ ++VTYN L+D C G +EKAL + + + ++ +++T++ +I G C+
Sbjct: 382 FNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCR 441
Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
+ A L+ + K + PD + + +I GL + G +E +L + M E PS
Sbjct: 442 TDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPS 498
Score = 201 bits (511), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 130/455 (28%), Positives = 220/455 (48%), Gaps = 4/455 (0%)
Query: 99 KFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYT 158
KFD + + EM+ + +V + ++ + L+ +M + GI + +T
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 159 ILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH 218
ILIH C +++ A ++ M + G P++ T +L++G+C+ A+ M
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 219 NLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEA 278
PNVV + +++GLCK +L A F M K G+ + YN LI G +G +A
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 279 MSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDG 338
L +M K +I P+V + LI G L A L ++M + ++ NV TYNSLI+G
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 298
Query: 339 YCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPD 398
+C G + A + M KG P+VVT+++LI G CK+ ++ M L+ EM + LV D
Sbjct: 299 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD 358
Query: 399 VVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFL 458
+ LI G + G + +++ M++ ++P + T + L+ L NG+I AL +
Sbjct: 359 AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKAL-VMV 417
Query: 459 EKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL 518
E K++ + + Y IIQ LC ++ +A LF + ++PD Y TM+ GL
Sbjct: 418 EDLQKSE---MDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGL 474
Query: 519 LRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
R + L M + G +P I +R +
Sbjct: 475 CRKGLQREADKLCRRMKEDGFMPSERIYDETLRDH 509
Score = 146 bits (368), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 147/290 (50%), Gaps = 4/290 (1%)
Query: 54 VFSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
++TLI S G +A + R K ++ P + AL++ +K+G Y+EM
Sbjct: 221 TYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEM 280
Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
+ +V +V TY LI+ C G + A +FD M+ KG P VV Y LI G C ++
Sbjct: 281 IRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRV 340
Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
+ +F M G+V + +TYN L+ GYC+ +N A + ++ M+ + P++VT+ +L
Sbjct: 341 EDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNIL 400
Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
+D LC G++ A + K + +I YN +I G C+ L EA L + + +
Sbjct: 401 LDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGV 460
Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYN-SLIDGY 339
PD Y +I GLC G A+ L ++M ++G + + Y+ +L D Y
Sbjct: 461 KPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHY 510
Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 108/223 (48%), Gaps = 5/223 (2%)
Query: 52 PSVFS--TLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEF 106
P+VF+ +LI F G + +A +++ + P + N L+ G K + + +
Sbjct: 287 PNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKL 346
Query: 107 YEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCN 166
+ EM GLV D TY LI C G + A +F+ M+D G+ P +V Y IL+ LCN
Sbjct: 347 FCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCN 406
Query: 167 ENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
K+ +A M +++ + ++ TYN ++ G C+ + A + + ++P+ +
Sbjct: 407 NGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIA 466
Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
+ ++ GLC+ G R A M + G P+ +Y+ + H
Sbjct: 467 YITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDH 509
Score = 42.4 bits (98), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 70/190 (36%), Gaps = 42/190 (22%)
Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
D A L+ EM+ +P +V FT ++ ++K + LY +M I+ +++ + L
Sbjct: 61 DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 120
Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
IH C ++ A L M
Sbjct: 121 IH---------------------------------------CFCRCSRLSLALALLGKMM 141
Query: 501 SDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLK 560
RP T ++L G + R + + L+ M G VP+ VI ++ G +N DL
Sbjct: 142 KLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLN 201
Query: 561 SA---FRCSE 567
+A F C E
Sbjct: 202 NALEVFYCME 211
>sp|O80958|PP194_ARATH Pentatricopeptide repeat-containing protein At2g39230,
mitochondrial OS=Arabidopsis thaliana GN=LOJ PE=1 SV=1
Length = 867
Score = 239 bits (611), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 155/530 (29%), Positives = 263/530 (49%), Gaps = 9/530 (1%)
Query: 54 VFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
++++I+AF + G++EEA+ V ++ + ++ A +L+NG K + + + M
Sbjct: 312 TYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRM 371
Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
GL D V + V+++ C ++ KA+ + M I P+ V+ +I G
Sbjct: 372 EEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESP 431
Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
A +F E + + N + +CK V+ A F M ++PNVV + +
Sbjct: 432 EAALEIFNDSFESWIAHG-FMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNM 490
Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
M C++ + A + F M + G+ PN F Y+ LIDG K + A + ++M
Sbjct: 491 MLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNF 550
Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA-NVVTYNSLIDGYCKEGDMEKAL 349
+ YN +I GLC VGQ A+ +LQ + KE + + +YNS+IDG+ K GD + A+
Sbjct: 551 EANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAV 610
Query: 350 SVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGL 409
+M+E G PNVVTF+SLI+G CK+ +D A+ + EM L D+ + ALIDG
Sbjct: 611 ETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGF 670
Query: 410 SKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYC 469
K +MK L+ E+ E + P+V +SLI G G++ A++ + K DG C
Sbjct: 671 CKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLY--KKMVNDGISC 728
Query: 470 SPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
+ Y +I L DG I AS L+S++ + PD + ++ GL + + L
Sbjct: 729 --DLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASK 786
Query: 530 LLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSET 579
+L +M K + P+ ++ ++ G+ G+L AFR + + E I +T
Sbjct: 787 MLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDT 836
Score = 209 bits (533), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 140/496 (28%), Positives = 240/496 (48%), Gaps = 39/496 (7%)
Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
G+ A TY +I +G++ +A+ + DEM+ GI +V+ T L++G C N++ +A
Sbjct: 305 GVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKA 364
Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
+F M E G+ P+ ++ +++ +CK ++ +A+EFY M + P+ V ++ G
Sbjct: 365 LDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQG 424
Query: 234 ----------------------------------LCKVGELRAAGNFFVHMAKFGVFPNI 259
CK G++ AA +F M + G+ PN+
Sbjct: 425 CLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNV 484
Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQK 319
YN ++ HC+ N+ A S+ SEM + + P+ FTY+ILI G + A ++ +
Sbjct: 485 VFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQ 544
Query: 320 MYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM-TEKGVEPNVVTFSSLIDGQCKAG 378
M AN V YN++I+G CK G KA + + EK + +++S+IDG K G
Sbjct: 545 MNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVG 604
Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
+ D+A+ Y EM P+VV FT+LI+G K M L + EM ++ +
Sbjct: 605 DTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYG 664
Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
+LI G K + A F E + PN +Y ++I G++ A L+
Sbjct: 665 ALIDGFCKKNDMKTAYTLFSELPELG----LMPNVSVYNSLISGFRNLGKMDAAIDLYKK 720
Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
M +D + D TYTTM+ GLL+ + L ++++ +GIVPD +++ V+V G + G
Sbjct: 721 MVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQ 780
Query: 559 LKSAFRCSEFLKESRI 574
A + E +K+ +
Sbjct: 781 FLKASKMLEEMKKKDV 796
Score = 192 bits (489), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 124/446 (27%), Positives = 223/446 (50%), Gaps = 7/446 (1%)
Query: 2 FYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIA 61
FY+ + + L+ + + LK+ P +FN +S E + + + + +
Sbjct: 402 FYMRMKSVRIAPSSVLVHTMIQGCLKAESPE-AALEIFN--DSFESWIAHGFMCNKIFLL 458
Query: 62 FSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVAD 118
F + G ++ A + +E + P + N ++ + D + EM+ GL +
Sbjct: 459 FCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPN 518
Query: 119 VVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFR 178
TY +LID D A ++ ++M E VIY +I+GLC + +A+ M +
Sbjct: 519 NFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQ 578
Query: 179 SM-RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKV 237
++ +E + +YN+++DG+ KV D + A+E Y EM + PNVVTF L++G CK
Sbjct: 579 NLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKS 638
Query: 238 GELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTY 297
+ A M + ++ Y LIDG CK ++ A +L SE+ + + P+V Y
Sbjct: 639 NRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVY 698
Query: 298 NILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTE 357
N LI G +G+++ A L +KM +GI ++ TY ++IDG K+G++ A + S++ +
Sbjct: 699 NSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLD 758
Query: 358 KGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKE 417
G+ P+ + L++G K G A + EM K + P+V++++ +I G ++GN+ E
Sbjct: 759 LGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNE 818
Query: 418 TLRLYKEMLEAKITPSVFTVSSLIHG 443
RL+ EMLE I + L+ G
Sbjct: 819 AFRLHDEMLEKGIVHDDTVFNLLVSG 844
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 130/552 (23%), Positives = 259/552 (46%), Gaps = 41/552 (7%)
Query: 49 KFNPSVFSTLIIAFSEMGHIEEA-----LWVYRKIEVLPAIQACNALLNGLIKKGKFDSV 103
+ P F+ L+ A+ ++ A L V RK V+P + N +L+ L++ D
Sbjct: 166 ELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRK--VVPFVPYVNNVLSSLVRSNLIDEA 223
Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
E Y +MVL G+ D VT +L+ + +A+ +F ++ +G EP +++++ +
Sbjct: 224 KEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQA 283
Query: 164 LCNENKMVEAESMFRSMR-ECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP 222
C +V A + R MR + GV + TY +++ + K ++ A+ EM+ +
Sbjct: 284 ACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPM 343
Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLC 282
+V+ L++G CK EL A + F M + G+ P+ +++ +++ CK + +A+
Sbjct: 344 SVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFY 403
Query: 283 SEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKE 342
M+ I+P + +I+G E A + + E +A+ N + +CK+
Sbjct: 404 MRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSF-ESWIAHGFMCNKIFLLFCKQ 462
Query: 343 GDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVF 402
G ++ A S M +KG+EPNVV +++++ C+ N+D A +++EM+ K L P+ +
Sbjct: 463 GKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTY 522
Query: 403 TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA----LNFFL 458
+ LIDG K+ + + + +M + + +++I+GL K G+ S A N
Sbjct: 523 SILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIK 582
Query: 459 EK---------------------TDKTDGGY-------CSPNHVLYAAIIQALCYDGQIL 490
EK TD Y SPN V + ++I C ++
Sbjct: 583 EKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMD 642
Query: 491 KASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
A ++ +M+S L+ D Y ++ G + M L +++ ++G++P+ + ++
Sbjct: 643 LALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLI 702
Query: 551 RGYQENGDLKSA 562
G++ G + +A
Sbjct: 703 SGFRNLGKMDAA 714
Score = 157 bits (396), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 151/290 (52%), Gaps = 1/290 (0%)
Query: 88 NALLNGLIKKGKFDSVWEFYEEMVLCGLVA-DVVTYGVLIDCCCGQGDVMKALNLFDEMI 146
N ++NGL K G+ E + ++ + +Y +ID GD A+ + EM
Sbjct: 558 NTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMS 617
Query: 147 DKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVN 206
+ G P VV +T LI+G C N+M A M M+ + +L Y AL+DG+CK D+
Sbjct: 618 ENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMK 677
Query: 207 RALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLI 266
A + E+ L PNV + L+ G +G++ AA + + M G+ ++F Y +I
Sbjct: 678 TAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMI 737
Query: 267 DGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGIL 326
DG K GN+ A L SE+ I PD + +L+ GL GQ A +L++M K+ +
Sbjct: 738 DGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVT 797
Query: 327 ANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
NV+ Y+++I G+ +EG++ +A + +M EKG+ + F+ L+ G+ +
Sbjct: 798 PNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSGRVE 847
Score = 125 bits (315), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 108/440 (24%), Positives = 192/440 (43%), Gaps = 7/440 (1%)
Query: 140 NLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGY 199
NL D G E T + L++ +M A F M + VVP + N ++
Sbjct: 155 NLVDSSKRFGFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSL 214
Query: 200 CKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNI 259
+ ++ A E Y++M+ + + VT +LM + + A F + G P+
Sbjct: 215 VRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDG 274
Query: 260 FVYNCLIDGHCKAGNLFEAMSLCSEME-KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
+++ + CK +L A+ L EM K + TY +I G +E A ++
Sbjct: 275 LLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMD 334
Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
+M GI +V+ SL++GYCK ++ KAL + ++M E+G+ P+ V FS +++ CK
Sbjct: 335 EMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNM 394
Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVS 438
++ A+ Y M + P V+ +I G K + + L ++ + E+ I F +
Sbjct: 395 EMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHG-FMCN 453
Query: 439 SLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSD 498
+ K G++ A +F K + G PN V Y ++ A C + A +FS+
Sbjct: 454 KIFLLFCKQGKVDAATSFL--KMMEQKG--IEPNVVFYNNMMLAHCRMKNMDLARSIFSE 509
Query: 499 MRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGD 558
M L P+N TY+ ++ G + K + ++ M + VI ++ G + G
Sbjct: 510 MLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQ 569
Query: 559 LKSAFR-CSEFLKESRIGSS 577
A +KE R S
Sbjct: 570 TSKAKEMLQNLIKEKRYSMS 589
Score = 125 bits (314), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 89/390 (22%), Positives = 177/390 (45%), Gaps = 10/390 (2%)
Query: 192 YNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA 251
+N L++ Y + ++ A++ + M+ + P V ++ L + + A + M
Sbjct: 172 FNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMV 231
Query: 252 KFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLE 311
GV + L+ + EA+ + + PD +++ ++ C L
Sbjct: 232 LIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLV 291
Query: 312 GAEGLLQKMY-KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSL 370
A LL++M K G+ A+ TY S+I + KEG+ME+A+ V +M G+ +V+ +SL
Sbjct: 292 MALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSL 351
Query: 371 IDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKI 430
++G CK + A+ L+ M + L PD V+F+ +++ K+ M++ + Y M +I
Sbjct: 352 VNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRI 411
Query: 431 TPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK--TDGGYCSPNHVLYAAIIQALCYDGQ 488
PS V ++I G K AL F + + G C+ +L+ C G+
Sbjct: 412 APSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLF-------CKQGK 464
Query: 489 ILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQV 548
+ A+ M + P+ Y M+ R K M + ++M++ G+ P+ +
Sbjct: 465 VDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSI 524
Query: 549 MVRGYQENGDLKSAFRCSEFLKESRIGSSE 578
++ G+ +N D ++A+ + S ++E
Sbjct: 525 LIDGFFKNKDEQNAWDVINQMNASNFEANE 554
Score = 63.2 bits (152), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 108/252 (42%), Gaps = 3/252 (1%)
Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
+N L++ Y + M+ A+ M ++ V P V ++++ ++ ID A +Y +MV
Sbjct: 172 FNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMV 231
Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
+ + D V L+ ++ +E +++++ ++ P S + K +
Sbjct: 232 LIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLV 291
Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
AL+ E K + Y ++I A +G + +A ++ +M +
Sbjct: 292 MALDLLREMRGKLG---VPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAA 348
Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
T+++ G + + + L M + G+ PD V+ VMV + +N +++ A +K
Sbjct: 349 TSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKS 408
Query: 572 SRIGSSETEGHT 583
RI S HT
Sbjct: 409 VRIAPSSVLVHT 420
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 239 bits (611), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 149/493 (30%), Positives = 247/493 (50%), Gaps = 15/493 (3%)
Query: 64 EMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYG 123
E+ H + ++W + P + N L+ L + + E+M GLV D T+
Sbjct: 174 EISHAKMSVWGIK-----PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFT 228
Query: 124 VLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSM-RE 182
++ +GD+ AL + ++M++ G + V +++HG C E ++ +A + + M +
Sbjct: 229 TVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQ 288
Query: 183 CGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRA 242
G P+ YT+N L++G CK V A+E ML P+V T+ ++ GLCK+GE++
Sbjct: 289 DGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKE 348
Query: 243 AGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIK 302
A M PN YN LI CK + EA L + I PDV T+N LI+
Sbjct: 349 AVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQ 408
Query: 303 GLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEP 362
GLC A L ++M +G + TYN LID C +G +++AL++ QM G
Sbjct: 409 GLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCAR 468
Query: 363 NVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLY 422
+V+T+++LIDG CKA A ++ EM + + + V + LIDGL K +++ +L
Sbjct: 469 SVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLM 528
Query: 423 KEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQA 482
+M+ P +T +SL+ + G I A + T ++G C P+ V Y +I
Sbjct: 529 DQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMT--SNG--CEPDIVTYGTLISG 584
Query: 483 LCYDGQILKASKLFS--DMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMG-I 539
LC G++ ASKL M+ NL P Y +++GL R ++ + + L +M++
Sbjct: 585 LCKAGRVEVASKLLRSIQMKGINLTPH--AYNPVIQGLFRKRKTTEAINLFREMLEQNEA 642
Query: 540 VPDAVINQVMVRG 552
PDAV +++ RG
Sbjct: 643 PPDAVSYRIVFRG 655
Score = 237 bits (605), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 150/486 (30%), Positives = 243/486 (50%), Gaps = 16/486 (3%)
Query: 58 LIIAFSEMGHIEEALWVYRKIE----VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLC 113
++ F + G +E+AL +++ P N L+NGL K G E + M+
Sbjct: 265 IVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQE 324
Query: 114 GLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEA 173
G DV TY +I C G+V +A+ + D+MI + P V Y LI LC EN++ EA
Sbjct: 325 GYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEA 384
Query: 174 ESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
+ R + G++P++ T+N+L+ G C + A+E + EM +P+ T+ +L+D
Sbjct: 385 TELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDS 444
Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
LC G+L A N M G ++ YN LIDG CKA EA + EME +S +
Sbjct: 445 LCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRN 504
Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCS 353
TYN LI GLC ++E A L+ +M EG + TYNSL+ +C+ GD++KA +
Sbjct: 505 SVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQ 564
Query: 354 QMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDG 413
MT G EP++VT+ +LI G CKAG ++ A L + +K + + +I GL +
Sbjct: 565 AMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKR 624
Query: 414 NMKETLRLYKEMLEA-KITPSVFTVSSLIHGLFK-NGRISNALNFFLEKTDKTDGGYCSP 471
E + L++EMLE + P + + GL G I A++F +E +K G+
Sbjct: 625 KTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEK---GFVPE 681
Query: 472 NHVLY--AAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
LY A + L + ++K + M+ + +M++GLL+ ++ D +
Sbjct: 682 FSSLYMLAEGLLTLSMEETLVKLVNMV--MQKARFSEEE---VSMVKGLLKIRKFQDALA 736
Query: 530 LLADMI 535
L ++
Sbjct: 737 TLGGVL 742
Score = 223 bits (569), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 134/415 (32%), Positives = 210/415 (50%), Gaps = 5/415 (1%)
Query: 149 GIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA 208
GI+P V + +LI LC +++ A M M G+VP+ T+ +M GY + D++ A
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243
Query: 209 LEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMA-KFGVFPNIFVYNCLID 267
L +M+ + V+ V++ G CK G + A NF M+ + G FP+ + +N L++
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303
Query: 268 GHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILA 327
G CKAG++ A+ + M + PDV+TYN +I GLC +G+++ A +L +M
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSP 363
Query: 328 NVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLY 387
N VTYN+LI CKE +E+A + +T KG+ P+V TF+SLI G C N AM L+
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423
Query: 388 TEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKN 447
EM K PD + LID L G + E L + K+M + SV T ++LI G K
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKA 483
Query: 448 GRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPD 507
+ A F D+ + S N V Y +I LC ++ A++L M + +PD
Sbjct: 484 NKTREAEEIF----DEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPD 539
Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
TY ++L R + ++ M G PD V ++ G + G ++ A
Sbjct: 540 KYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVA 594
Score = 215 bits (548), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 135/471 (28%), Positives = 232/471 (49%), Gaps = 6/471 (1%)
Query: 94 LIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK-GIEP 152
L + G FD + + E+M T+ +LI+ + L++ D MID+ G++P
Sbjct: 93 LGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKP 152
Query: 153 TVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFY 212
Y +++ L + N + E M G+ P++ T+N L+ C+ + A+
Sbjct: 153 DTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILML 212
Query: 213 HEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKA 272
+M + L P+ TF +M G + G+L A M +FG + N ++ G CK
Sbjct: 213 EDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKE 272
Query: 273 GNLFEAMSLCSEMEKFE-ISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVT 331
G + +A++ EM + PD +T+N L+ GLC G ++ A ++ M +EG +V T
Sbjct: 273 GRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYT 332
Query: 332 YNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMV 391
YNS+I G CK G++++A+ V QM + PN VT+++LI CK ++ A L +
Sbjct: 333 YNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLT 392
Query: 392 IKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRIS 451
K ++PDV F +LI GL N + + L++EM P FT + LI L G++
Sbjct: 393 SKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLD 452
Query: 452 NALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTY 511
ALN K + G C+ + + Y +I C + +A ++F +M + ++ TY
Sbjct: 453 EALNML--KQMELSG--CARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTY 508
Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
T++ GL +++R+ D L+ MI G PD ++ + GD+K A
Sbjct: 509 NTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKA 559
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/432 (24%), Positives = 201/432 (46%), Gaps = 7/432 (1%)
Query: 125 LIDCCCGQGDVMKALNLFDEMIDK-GIEPTVVIYTILIHGLCNENKMVEAESMFRSMREC 183
L+D Q D AL LF+ K P +Y ++ L + + + M+
Sbjct: 53 LLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSS 112
Query: 184 GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHH-NLQPNVVTFGVLMDGLCKVGELRA 242
T+ L++ Y + + L M+ L+P+ + +++ L L+
Sbjct: 113 RCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKL 172
Query: 243 AGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIK 302
M+ +G+ P++ +N LI C+A L A+ + +M + + PD T+ +++
Sbjct: 173 VEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQ 232
Query: 303 GLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMT-EKGVE 361
G G L+GA + ++M + G + V+ N ++ G+CKEG +E AL+ +M+ + G
Sbjct: 233 GYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFF 292
Query: 362 PNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRL 421
P+ TF++L++G CKAG++ A+ + M+ + PDV + ++I GL K G +KE + +
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEV 352
Query: 422 YKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQ 481
+M+ +P+ T ++LI L K ++ A T K P+ + ++IQ
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKG----ILPDVCTFNSLIQ 408
Query: 482 ALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
LC A +LF +MRS PD TY ++ L ++ + + +L M G
Sbjct: 409 GLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCAR 468
Query: 542 DAVINQVMVRGY 553
+ ++ G+
Sbjct: 469 SVITYNTLIDGF 480
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 170/363 (46%), Gaps = 21/363 (5%)
Query: 205 VNRALEFYHEMLHHNLQP--NVVTFGV------------LMDGLCKVGELRAAGNFFVHM 250
+++A+ H NL P + ++F L+D L + AA F
Sbjct: 14 ISQAVTLTHHSFSLNLTPPSSTISFASPHSAALSSTDVKLLDSLRSQPDDSAALRLFNLA 73
Query: 251 AKFGVF-PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQ 309
+K F P +Y ++ ++G+ + + +M+ T+ ILI+
Sbjct: 74 SKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFEL 133
Query: 310 LEGAEGLLQKMYKE-GILANVVTYNSLIDGYCKEGDMEKALSVC-SQMTEKGVEPNVVTF 367
+ ++ M E G+ + YN +++ +G+ K + + ++M+ G++P+V TF
Sbjct: 134 QDEILSVVDWMIDEFGLKPDTHFYNRMLN-LLVDGNSLKLVEISHAKMSVWGIKPDVSTF 192
Query: 368 SSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLE 427
+ LI C+A + A+ + +M LVPD FT ++ G ++G++ LR+ ++M+E
Sbjct: 193 NVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVE 252
Query: 428 AKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDG 487
+ S +V+ ++HG K GR+ +ALNF E +++ DG + P+ + ++ LC G
Sbjct: 253 FGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQ-DGFF--PDQYTFNTLVNGLCKAG 309
Query: 488 QILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQ 547
+ A ++ M + PD TY +++ GL + + + + +L MI P+ V
Sbjct: 310 HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYN 369
Query: 548 VMV 550
++
Sbjct: 370 TLI 372
Score = 52.8 bits (125), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Query: 471 PNHVLYAAIIQALCYDGQILKASKL-FSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMM 529
P+ Y ++ L DG LK ++ + M ++PD T+ +++ L RA ++ ++
Sbjct: 152 PDTHFYNRMLNLLV-DGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAIL 210
Query: 530 LLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKE 571
+L DM G+VPD +++GY E GDL A R E + E
Sbjct: 211 MLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVE 252
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 239 bits (610), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 164/542 (30%), Positives = 259/542 (47%), Gaps = 30/542 (5%)
Query: 49 KFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWE 105
K N S F+ + + G E+A V R++ +P + +LN L K + +
Sbjct: 448 KINVSSFTRCLCS---AGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFL 504
Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
+EEM GLVADV TY +++D C G + +A F+EM + G P VV YT LIH
Sbjct: 505 LFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYL 564
Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML--------- 216
K+ A +F +M G +PN+ TY+AL+DG+CK V +A + + M
Sbjct: 565 KAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVD 624
Query: 217 -------HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
++ +PNVVT+G L+DG CK + A M+ G PN VY+ LIDG
Sbjct: 625 MYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGL 684
Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
CK G L EA + +EM + ++TY+ LI V + + A +L KM + NV
Sbjct: 685 CKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNV 744
Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTE 389
V Y +IDG CK G ++A + M EKG +PNVVT++++IDG G I+ + L
Sbjct: 745 VIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLER 804
Query: 390 MVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGR 449
M K + P+ V + LID K+G + L +EM + +I G K
Sbjct: 805 MGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFI 864
Query: 450 ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR--SDNLRPD 507
S L L++ + D +P +Y +I L ++ A +L ++ S L
Sbjct: 865 ESLGL---LDEIGQDDT---APFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDY 918
Query: 508 NCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRCSE 567
+ TY +++ L A ++ L ++M K G++P+ +++G N + A +
Sbjct: 919 SSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLD 978
Query: 568 FL 569
F+
Sbjct: 979 FI 980
Score = 235 bits (600), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 155/542 (28%), Positives = 259/542 (47%), Gaps = 31/542 (5%)
Query: 51 NPSVFSTLIIAFSEMGHIEEALWVYRKIEV---LPAIQACNALLNGLIKKGK------FD 101
+P +F++L+ A+ G A + +K+ +P N L+ + D
Sbjct: 371 SPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLD 430
Query: 102 SVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILI 161
+ Y EM+ G+V + + C C G KA ++ EMI +G P Y+ ++
Sbjct: 431 LAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVL 490
Query: 162 HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
+ LCN +KM A +F M+ G+V ++YTY ++D +CK + +A ++++EM
Sbjct: 491 NYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCT 550
Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAG------NL 275
PNVVT+ L+ K ++ A F M G PNI Y+ LIDGHCKAG +
Sbjct: 551 PNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQI 610
Query: 276 FEAMSLCSEMEKFEI----------SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI 325
FE M ++ ++ P+V TY L+ G C ++E A LL M EG
Sbjct: 611 FERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGC 670
Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
N + Y++LIDG CK G +++A V ++M+E G + T+SSLID K D A
Sbjct: 671 EPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASK 730
Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLF 445
+ ++M+ S P+VV++T +IDGL K G E +L + M E P+V T +++I G
Sbjct: 731 VLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFG 790
Query: 446 KNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLR 505
G+I LE ++ +PN+V Y +I C +G + A L +M+ +
Sbjct: 791 MIGKIETC----LELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWP 846
Query: 506 PDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFRC 565
Y ++ G K ++ + LL ++ + P + ++++ + L+ A R
Sbjct: 847 THTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRL 904
Query: 566 SE 567
E
Sbjct: 905 LE 906
Score = 229 bits (583), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 165/562 (29%), Positives = 255/562 (45%), Gaps = 37/562 (6%)
Query: 41 ALNSLEIPKFNP-SVFST-LIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNGLI 95
AL +E F P +VF T LI E EEA L R LP + + LL G +
Sbjct: 289 ALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCL 348
Query: 96 KKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVV 155
K + M++ G + L+ C GD A L +M+ G P V
Sbjct: 349 NKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYV 408
Query: 156 IYTILIHGLCNENKMVE------AESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRAL 209
+Y ILI +C + + AE + M GVV N ++ C +A
Sbjct: 409 VYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAF 468
Query: 210 EFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGH 269
EM+ P+ T+ +++ LC ++ A F M + G+ +++ Y ++D
Sbjct: 469 SVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSF 528
Query: 270 CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANV 329
CKAG + +A +EM + +P+V TY LI ++ A L + M EG L N+
Sbjct: 529 CKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNI 588
Query: 330 VTYNSLIDGYCKEGDMEKALSVCSQM----------------TEKGVEPNVVTFSSLIDG 373
VTY++LIDG+CK G +EKA + +M + PNVVT+ +L+DG
Sbjct: 589 VTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDG 648
Query: 374 QCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPS 433
CK+ ++ A L M ++ P+ +V+ ALIDGL K G + E + EM E +
Sbjct: 649 FCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPAT 708
Query: 434 VFTVSSLIHGLFKNGR---ISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQIL 490
++T SSLI FK R S L+ LE + C+PN V+Y +I LC G+
Sbjct: 709 LYTYSSLIDRYFKVKRQDLASKVLSKMLENS-------CAPNVVIYTEMIDGLCKVGKTD 761
Query: 491 KASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
+A KL M +P+ TYT M+ G ++ + LL M G+ P+ V +V++
Sbjct: 762 EAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLI 821
Query: 551 RGYQENGDLKSAFRCSEFLKES 572
+NG L A E +K++
Sbjct: 822 DHCCKNGALDVAHNLLEEMKQT 843
Score = 193 bits (491), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 146/569 (25%), Positives = 243/569 (42%), Gaps = 71/569 (12%)
Query: 60 IAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADV 119
IA E+G +++ + +R P+ N L+ +K + DS + EM L L D
Sbjct: 218 IALEELGRLKD--FRFR-----PSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDG 270
Query: 120 VTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRS 179
T C G +AL L + + P V YT LI GLC + EA
Sbjct: 271 FTLRCFAYSLCKVGKWREALTLVET---ENFVPDTVFYTKLISGLCEASLFEEAMDFLNR 327
Query: 180 MRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGE 239
MR +PN+ TY+ L+ G + R + M+ P+ F L+ C G+
Sbjct: 328 MRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGD 387
Query: 240 LRAAGNFFVHMAKFGVFPNIFVYNCLIDG------------------------------- 268
A M K G P VYN LI
Sbjct: 388 HSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLN 447
Query: 269 ----------HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQ 318
C AG +A S+ EM PD TY+ ++ LC ++E A L +
Sbjct: 448 KINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFE 507
Query: 319 KMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAG 378
+M + G++A+V TY ++D +CK G +E+A ++M E G PNVVT+++LI KA
Sbjct: 508 EMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAK 567
Query: 379 NIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKIT------- 431
+ A L+ M+ + +P++V ++ALIDG K G +++ ++++ M +K
Sbjct: 568 KVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYF 627
Query: 432 ---------PSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQA 482
P+V T +L+ G K+ R+ A D C PN ++Y A+I
Sbjct: 628 KQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLL----DAMSMEGCEPNQIVYDALIDG 683
Query: 483 LCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPD 542
LC G++ +A ++ ++M TY++++ + KR +L+ M++ P+
Sbjct: 684 LCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPN 743
Query: 543 AVINQVMVRGYQENGDLKSAFRCSEFLKE 571
VI M+ G + G A++ + ++E
Sbjct: 744 VVIYTEMIDGLCKVGKTDEAYKLMQMMEE 772
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 129/533 (24%), Positives = 200/533 (37%), Gaps = 99/533 (18%)
Query: 122 YGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMR 181
Y L+D D ++ D E +L+ C A ++
Sbjct: 168 YNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLK 227
Query: 182 ECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELR 241
+ P+ TYN L+ + K ++ A + EM NL+ + T LCKVG+ R
Sbjct: 228 DFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWR 287
Query: 242 AAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILI 301
A V F P+ Y LI G C+A EAM + M P+V TY+ L+
Sbjct: 288 EALT-LVETENF--VPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLL 344
Query: 302 KGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKAL------------ 349
G QL + +L M EG + +NSL+ YC GD A
Sbjct: 345 CGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHM 404
Query: 350 -----------SVC------------------SQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
S+C S+M GV N + SS C AG
Sbjct: 405 PGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKY 464
Query: 381 DAAMGLYTEMVIKSLVPD-----------------------------------VVVFTAL 405
+ A + EM+ + +PD V +T +
Sbjct: 465 EKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIM 524
Query: 406 IDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTD 465
+D K G +++ + + EM E TP+V T ++LIH K ++S A F +T ++
Sbjct: 525 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELF--ETMLSE 582
Query: 466 GGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM----------------RSDNLRPDNC 509
G C PN V Y+A+I C GQ+ KA ++F M ++ RP+
Sbjct: 583 G--CLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVV 640
Query: 510 TYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
TY +L G ++ R+ + LL M G P+ ++ ++ G + G L A
Sbjct: 641 TYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEA 693
Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 111/455 (24%), Positives = 173/455 (38%), Gaps = 77/455 (16%)
Query: 181 RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGEL 240
R+ G YNAL+D + D EF ++ + + VL+ C+ G
Sbjct: 157 RQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSF 216
Query: 241 RAAGNFFVHMAKFGVFPNIFVYNCLIDGH------------------------------- 269
A + F P+ YNCLI
Sbjct: 217 SIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCF 276
Query: 270 ----CKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI 325
CK G EA++L E E F PD Y LI GLC E A L +M
Sbjct: 277 AYSLCKVGKWREALTLV-ETENF--VPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSC 333
Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
L NVVTY++L+ G + + + V + M +G P+ F+SL+ C +G+ A
Sbjct: 334 LPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYK 393
Query: 386 LYTEMVIKSLVPDVVVFTALIDGLSKDGN------MKETLRLYKEMLEAKITPSVFTVSS 439
L +MV +P VV+ LI + D + + + Y EML A + + VSS
Sbjct: 394 LLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSS 453
Query: 440 LIHGLFKNGRISNA----------------------LNF----------FLEKTDKTDGG 467
L G+ A LN+ FL + GG
Sbjct: 454 FTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGG 513
Query: 468 YCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDV 527
+ + Y ++ + C G I +A K F++MR P+ TYT ++ L+AK++
Sbjct: 514 LVADVYT-YTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYA 572
Query: 528 MMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
L M+ G +P+ V ++ G+ + G ++ A
Sbjct: 573 NELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKA 607
>sp|Q9ZQF1|PP152_ARATH Pentatricopeptide repeat-containing protein At2g15630,
mitochondrial OS=Arabidopsis thaliana GN=At2g15630 PE=3
SV=1
Length = 627
Score = 239 bits (609), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 133/374 (35%), Positives = 208/374 (55%), Gaps = 8/374 (2%)
Query: 42 LNSLEIPKFNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIK 96
L +E+ P++ ++TL+ FS G IE A + +++ P +Q N +L+ +
Sbjct: 248 LGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCN 307
Query: 97 KGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVI 156
+G+ E EM GLV D V+Y +LI C GD+ A DEM+ +G+ PT
Sbjct: 308 EGR---ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYT 364
Query: 157 YTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEML 216
Y LIHGL ENK+ AE + R +RE G+V + TYN L++GYC+ D +A + EM+
Sbjct: 365 YNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMM 424
Query: 217 HHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLF 276
+QP T+ L+ LC+ + R A F + G+ P++ + N L+DGHC GN+
Sbjct: 425 TDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMD 484
Query: 277 EAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLI 336
A SL EM+ I+PD TYN L++GLCG G+ E A L+ +M + GI + ++YN+LI
Sbjct: 485 RAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLI 544
Query: 337 DGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLV 396
GY K+GD + A V +M G P ++T+++L+ G K + A L EM + +V
Sbjct: 545 SGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIV 604
Query: 397 PDVVVFTALIDGLS 410
P+ F ++I+ +S
Sbjct: 605 PNDSSFCSVIEAMS 618
Score = 213 bits (541), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 130/427 (30%), Positives = 219/427 (51%), Gaps = 10/427 (2%)
Query: 140 NLFDEMI---DKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALM 196
NLFDE++ D+ + +++ +L+ C + EA F M+E G P T N ++
Sbjct: 138 NLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHIL 197
Query: 197 DGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVF 256
++ + A FY +M ++ NV TF ++++ LCK G+L+ A F M FG+
Sbjct: 198 TLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIK 257
Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGL 316
P I YN L+ G G + A + SEM+ PD+ TYN ++ +C G+ A +
Sbjct: 258 PTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEV 314
Query: 317 LQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCK 376
L++M + G++ + V+YN LI G GD+E A + +M ++G+ P T+++LI G
Sbjct: 315 LREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFM 374
Query: 377 AGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
I+AA L E+ K +V D V + LI+G + G+ K+ L+ EM+ I P+ FT
Sbjct: 375 ENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFT 434
Query: 437 VSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLF 496
+SLI+ L + + A F +K G P+ V+ ++ C G + +A L
Sbjct: 435 YTSLIYVLCRKNKTREADELF----EKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLL 490
Query: 497 SDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQEN 556
+M ++ PD+ TY ++RGL + + L+ +M + GI PD + ++ GY +
Sbjct: 491 KEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKK 550
Query: 557 GDLKSAF 563
GD K AF
Sbjct: 551 GDTKHAF 557
Score = 210 bits (534), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 134/475 (28%), Positives = 237/475 (49%), Gaps = 12/475 (2%)
Query: 54 VFSTLIIAFSEMGHIEEAL---WVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEM 110
+F L+ ++ ++EA+ ++ ++ P + CN +L L + + ++ W FY +M
Sbjct: 157 LFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADM 216
Query: 111 VLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKM 170
+ ++V T+ ++I+ C +G + KA M GI+PT+V Y L+ G ++
Sbjct: 217 YRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRI 276
Query: 171 VEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVL 230
A + M+ G P++ TYN ++ C + RA E EM L P+ V++ +L
Sbjct: 277 EGARLIISEMKSKGFQPDMQTYNPILSWMC---NEGRASEVLREMKEIGLVPDSVSYNIL 333
Query: 231 MDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI 290
+ G G+L A + M K G+ P + YN LI G + A L E+ + I
Sbjct: 334 IRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGI 393
Query: 291 SPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALS 350
D TYNILI G C G + A L +M +GI TY SLI C++ +A
Sbjct: 394 VLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADE 453
Query: 351 VCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLS 410
+ ++ KG++P++V ++L+DG C GN+D A L EM + S+ PD V + L+ GL
Sbjct: 454 LFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLC 513
Query: 411 KDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCS 470
+G +E L EM I P + ++LI G K G +A F+ + + G+ +
Sbjct: 514 GEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHA---FMVRDEMLSLGF-N 569
Query: 471 PNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGL--LRAKR 523
P + Y A+++ L + + A +L +M+S+ + P++ ++ +++ + L AK+
Sbjct: 570 PTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSNLDAKK 624
Score = 197 bits (502), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 152/551 (27%), Positives = 242/551 (43%), Gaps = 69/551 (12%)
Query: 49 KFNPSVFSTLII--------AFSEMGHIEEALWVYR-----------KIEVLPAIQACNA 89
K PS+ ST ++ AF+ + HI+ +YR I L + +
Sbjct: 68 KLTPSLVSTTLLSLVKTPNLAFNFVNHID----LYRLDFQTQCLAIAVISKLSSPKPVTQ 123
Query: 90 LLNGLIKKGKFDSVWEFYEEMVLCG---LVADVVTYGVLIDCCCGQGDVMKALNLFDEMI 146
LL ++ K +S+ ++E+VL + + +L+ CCC V +A+ F M
Sbjct: 124 LLKEVVTSRK-NSIRNLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMK 182
Query: 147 DKGIEP-----------------------------------TVVIYTILIHGLCNENKMV 171
+KG P V + I+I+ LC E K+
Sbjct: 183 EKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLK 242
Query: 172 EAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLM 231
+A+ M G+ P + TYN L+ G+ + A EM QP++ T+ ++
Sbjct: 243 KAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPIL 302
Query: 232 DGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEIS 291
+C G A M + G+ P+ YN LI G G+L A + EM K +
Sbjct: 303 SWMCNEGR---ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMV 359
Query: 292 PDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSV 351
P +TYN LI GL ++E AE L++++ ++GI+ + VTYN LI+GYC+ GD +KA ++
Sbjct: 360 PTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFAL 419
Query: 352 CSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSK 411
+M G++P T++SLI C+ A L+ ++V K + PD+V+ L+DG
Sbjct: 420 HDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCA 479
Query: 412 DGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSP 471
GNM L KEM I P T + L+ GL G+ A E + P
Sbjct: 480 IGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRG----IKP 535
Query: 472 NHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLL 531
+H+ Y +I G A + +M S P TY +L+GL + + LL
Sbjct: 536 DHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELL 595
Query: 532 ADMIKMGIVPD 542
+M GIVP+
Sbjct: 596 REMKSEGIVPN 606
Score = 35.8 bits (81), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 56/133 (42%), Gaps = 5/133 (3%)
Query: 39 FNALNSLEIPKFNPS--VFSTLIIAFSEMGHIEEA---LWVYRKIEVLPAIQACNALLNG 93
F+ L +++ NP ++ L+ G EEA + ++ + P + N L++G
Sbjct: 487 FSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISG 546
Query: 94 LIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPT 153
KKG + +EM+ G ++TY L+ + A L EM +GI P
Sbjct: 547 YSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPN 606
Query: 154 VVIYTILIHGLCN 166
+ +I + N
Sbjct: 607 DSSFCSVIEAMSN 619
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 238 bits (607), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 137/443 (30%), Positives = 237/443 (53%), Gaps = 4/443 (0%)
Query: 81 LPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALN 140
P+I + LL+ + K KFD V F E+M + G+ ++ TY +LI+C C + AL
Sbjct: 75 FPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALA 134
Query: 141 LFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYC 200
L +M+ G EP +V L++G C+ N++ +A ++ M E G P+ T+ L+ G
Sbjct: 135 LLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLF 194
Query: 201 KVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIF 260
+ A+ M+ QP++VT+G +++GLCK G+ A N M + N+
Sbjct: 195 LHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVV 254
Query: 261 VYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKM 320
+Y+ +ID CK + +A++L +EME + P+V TY+ LI LC G+ A LL M
Sbjct: 255 IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDM 314
Query: 321 YKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNI 380
+ I N+VT+++LID + K+G + KA + +M ++ ++PN+ T+SSLI+G C +
Sbjct: 315 IERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRL 374
Query: 381 DAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSL 440
A + M+ K +P+VV + LI+G K + + + L++EM + + + T ++L
Sbjct: 375 GEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTL 434
Query: 441 IHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMR 500
IHG F+ NA F + PN + Y ++ LC +G++ KA +F ++
Sbjct: 435 IHGFFQARDCDNAQMVFKQMVSVG----VHPNILTYNILLDGLCKNGKLAKAMVVFEYLQ 490
Query: 501 SDNLRPDNCTYTTMLRGLLRAKR 523
+ PD TY M+ G+ +A +
Sbjct: 491 RSTMEPDIYTYNIMIEGMCKAGK 513
Score = 226 bits (575), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 141/438 (32%), Positives = 227/438 (51%), Gaps = 10/438 (2%)
Query: 138 ALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMD 197
A+ LF M P+++ ++ L+ + NK S M G+ NLYTYN L++
Sbjct: 62 AIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILIN 121
Query: 198 GYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFP 257
+C+ + ++ AL +M+ +P++VT L++G C + A M + G P
Sbjct: 122 CFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKP 181
Query: 258 NIFVYNCLIDG---HCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAE 314
+ + LI G H KA EA++L M + PD+ TY ++ GLC G + A
Sbjct: 182 DTVTFTTLIHGLFLHNKAS---EAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL 238
Query: 315 GLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQ 374
LL KM I ANVV Y+++ID CK + AL++ ++M KGV PNV+T+SSLI
Sbjct: 239 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 298
Query: 375 CKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSV 434
C G A L ++M+ + + P++V F+ALID K G + + +LY+EM++ I P++
Sbjct: 299 CNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNI 358
Query: 435 FTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASK 494
FT SSLI+G R+ A LE + D C PN V Y +I C ++ K +
Sbjct: 359 FTYSSLINGFCMLDRLGEAKQ-MLELMIRKD---CLPNVVTYNTLINGFCKAKRVDKGME 414
Query: 495 LFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQ 554
LF +M L + TYTT++ G +A+ + M+ M+ +G+ P+ + +++ G
Sbjct: 415 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 474
Query: 555 ENGDLKSAFRCSEFLKES 572
+NG L A E+L+ S
Sbjct: 475 KNGKLAKAMVVFEYLQRS 492
Score = 206 bits (525), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 113/335 (33%), Positives = 175/335 (52%)
Query: 82 PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNL 141
P L++GL K + MV G D+VTYG +++ C +GD ALNL
Sbjct: 181 PDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNL 240
Query: 142 FDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCK 201
++M IE VVIY+ +I LC +A ++F M GV PN+ TY++L+ C
Sbjct: 241 LNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCN 300
Query: 202 VADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFV 261
+ A +M+ + PN+VTF L+D K G+L A + M K + PNIF
Sbjct: 301 YGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFT 360
Query: 262 YNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMY 321
Y+ LI+G C L EA + M + + P+V TYN LI G C +++ L ++M
Sbjct: 361 YSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMS 420
Query: 322 KEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNID 381
+ G++ N VTY +LI G+ + D + A V QM GV PN++T++ L+DG CK G +
Sbjct: 421 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLA 480
Query: 382 AAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMK 416
AM ++ + ++ PD+ + +I+G+ K G K
Sbjct: 481 KAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWK 515
Score = 165 bits (417), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 188/364 (51%), Gaps = 4/364 (1%)
Query: 190 YTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVH 249
Y Y ++ +++ A+ + M P+++ F L+ + K+ + +F
Sbjct: 44 YDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEK 103
Query: 250 MAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQ 309
M G+ N++ YN LI+ C+ L A++L +M K PD+ T N L+ G C +
Sbjct: 104 MEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNR 163
Query: 310 LEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSS 369
+ A L+ +M + G + VT+ +LI G +A+++ +M ++G +P++VT+ +
Sbjct: 164 ISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGA 223
Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
+++G CK G+ D A+ L +M + +VV+++ +ID L K + + L L+ EM
Sbjct: 224 VVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 283
Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQI 489
+ P+V T SSLI L GR S+A + ++ +PN V ++A+I A G++
Sbjct: 284 VRPNVITYSSLISCLCNYGRWSDASRLLSDMIERK----INPNLVTFSALIDAFVKKGKL 339
Query: 490 LKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVM 549
+KA KL+ +M ++ P+ TY++++ G R+ + +L MI+ +P+ V +
Sbjct: 340 VKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTL 399
Query: 550 VRGY 553
+ G+
Sbjct: 400 INGF 403
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 109/208 (52%), Gaps = 5/208 (2%)
Query: 49 KFNPSV--FSTLIIAFSEMGHIEEALWVYR---KIEVLPAIQACNALLNGLIKKGKFDSV 103
K NP++ FS LI AF + G + +A +Y K + P I ++L+NG +
Sbjct: 318 KINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEA 377
Query: 104 WEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHG 163
+ E M+ + +VVTY LI+ C V K + LF EM +G+ V YT LIHG
Sbjct: 378 KQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHG 437
Query: 164 LCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
A+ +F+ M GV PN+ TYN L+DG CK + +A+ + + ++P+
Sbjct: 438 FFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPD 497
Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMA 251
+ T+ ++++G+CK G+ + G +FV A
Sbjct: 498 IYTYNIMIEGMCKAGKWKMGGIYFVASA 525
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 137/310 (44%), Gaps = 41/310 (13%)
Query: 299 ILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEK 358
+L GL + +L+ A GL M + +++ ++ L+ K + +S +M
Sbjct: 49 VLRTGLSDI-ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEIL 107
Query: 359 GVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKET 418
G+ N+ T++ LI+ C+ + A+ L +M+ PD+V +L++G + +
Sbjct: 108 GISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 167
Query: 419 LRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAA 478
+ L +M+E P T ++LIHGLF + + S A+ D+ C P+ V Y A
Sbjct: 168 VALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALI----DRMVQRGCQPDLVTYGA 223
Query: 479 IIQALCYDGQI---------LKASK--------------------------LFSDMRSDN 503
++ LC G ++A+K LF++M +
Sbjct: 224 VVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 283
Query: 504 LRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAF 563
+RP+ TY++++ L R D LL+DMI+ I P+ V ++ + + G L A
Sbjct: 284 VRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAE 343
Query: 564 RC-SEFLKES 572
+ E +K S
Sbjct: 344 KLYEEMIKRS 353
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 84/195 (43%), Gaps = 4/195 (2%)
Query: 380 IDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSS 439
+D A+GL+ M P ++ F+ L+ ++K + ++M I+ +++T +
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118
Query: 440 LIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDM 499
LI+ R S GY P+ V +++ C+ +I A L M
Sbjct: 119 LINCF---CRCSRLSLALALLGKMMKLGY-EPDIVTLNSLLNGFCHGNRISDAVALVDQM 174
Query: 500 RSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDL 559
+PD T+TT++ GL + + + L+ M++ G PD V +V G + GD
Sbjct: 175 VEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDT 234
Query: 560 KSAFRCSEFLKESRI 574
A ++ ++I
Sbjct: 235 DLALNLLNKMEAAKI 249
>sp|Q9M302|PP270_ARATH Pentatricopeptide repeat-containing protein At3g48810
OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1
Length = 659
Score = 236 bits (602), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 168/589 (28%), Positives = 281/589 (47%), Gaps = 49/589 (8%)
Query: 2 FYVLANAKLYKNARCLIKDVTENLLKSRKPHHVCYSVFNALNSLEIPKFNPS--VFSTLI 59
F +AN+ L+K+ + + L + V Y L +++ F+ S +F ++I
Sbjct: 63 FKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQY----LLQQMKLQGFHCSEDLFISVI 118
Query: 60 IAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLV 116
+ ++G E A+ ++ +I+ P+++ N +L+ L+ + + ++ Y +M G
Sbjct: 119 SVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFE 178
Query: 117 ADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKG--------------------------- 149
+V TY VL+ C V A L EM +KG
Sbjct: 179 PNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL 238
Query: 150 ---IEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVN 206
EP V +Y LI+GLC E+ A + R M E G+ PN+ +Y+ L++ C +
Sbjct: 239 AERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIE 298
Query: 207 RALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAK-FGVFPNIFVYNCL 265
A F +ML PN+ T L+ G G A + + M + FG+ PN+ YN L
Sbjct: 299 LAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTL 358
Query: 266 IDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGI 325
+ G C GN+ +A+S+ S ME+ SP++ TY LI G G L+GA + KM G
Sbjct: 359 VQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGC 418
Query: 326 LANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMG 385
NVV Y ++++ C+ ++A S+ M+++ P+V TF++ I G C AG +D A
Sbjct: 419 CPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEK 478
Query: 386 LYTEMVIKSLV-PDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGL 444
++ +M + P++V + L+DGL+K ++E L +E+ + S T ++L+HG
Sbjct: 479 VFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGS 538
Query: 445 FKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRS--- 501
G AL L DG SP+ + II A C G+ +A+++ D+ S
Sbjct: 539 CNAGLPGIALQ--LVGKMMVDGK--SPDEITMNMIILAYCKQGKAERAAQML-DLVSCGR 593
Query: 502 DNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMV 550
RPD +YT ++ GL R+ D ++LL MI GIVP V++
Sbjct: 594 RKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLI 642
Score = 208 bits (529), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 141/529 (26%), Positives = 247/529 (46%), Gaps = 14/529 (2%)
Query: 39 FNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLI--- 95
F ++ + + K P F +I + G ++ ++ ++++ L L +I
Sbjct: 63 FKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMK-LQGFHCSEDLFISVISVY 121
Query: 96 -KKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTV 154
+ G + E + + G V Y ++D G+ + ++ +M G EP V
Sbjct: 122 RQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNV 181
Query: 155 VIYTILIHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHE 214
Y +L+ LC NK+ A+ + M G P+ +Y ++ C+V V E
Sbjct: 182 FTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRE---- 237
Query: 215 MLHHNLQPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGN 274
L +P V + L++GLCK + + A M + G+ PN+ Y+ LI+ C +G
Sbjct: 238 -LAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQ 296
Query: 275 LFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKE-GILANVVTYN 333
+ A S ++M K P+++T + L+KG G A L +M + G+ NVV YN
Sbjct: 297 IELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYN 356
Query: 334 SLIDGYCKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIK 393
+L+ G+C G++ KA+SV S M E G PN+ T+ SLI+G K G++D A+ ++ +M+
Sbjct: 357 TLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTS 416
Query: 394 SLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNA 453
P+VVV+T +++ L + KE L + M + PSV T ++ I GL GR+ A
Sbjct: 417 GCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWA 476
Query: 454 LNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTT 513
F + + C PN V Y ++ L +I +A L ++ + + TY T
Sbjct: 477 EKVFRQMEQQHR---CPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNT 533
Query: 514 MLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
+L G A + L+ M+ G PD + +++ Y + G + A
Sbjct: 534 LLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERA 582
Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 121/427 (28%), Positives = 208/427 (48%), Gaps = 41/427 (9%)
Query: 55 FSTLIIAFSEMGHIEEALWVYRKIEVLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCG 114
++T+I + E+G ++E + + E P + NAL+NGL K+ + +E EMV G
Sbjct: 219 YTTVISSMCEVGLVKEGRELAERFE--PVVSVYNALINGLCKEHDYKGAFELMREMVEKG 276
Query: 115 LVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAE 174
+ +V++Y LI+ C G + A + +M+ +G P + + L+ G +A
Sbjct: 277 ISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDAL 336
Query: 175 SMFRSM-RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDG 233
++ M R G+ PN+ YN L+ G+C ++ +A+ + M PN+ T+G L++G
Sbjct: 337 DLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLING 396
Query: 234 LCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPD 293
K G L A + M G PN+ VY +++ C+ EA SL M K +P
Sbjct: 397 FAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPS 456
Query: 294 VFTYNILIKGLCGVGQLEGAEGLLQKMYKEG-ILANVVTYNSLIDGYCKEGDMEKALSVC 352
V T+N IKGLC G+L+ AE + ++M ++ N+VTYN L+DG K +E+A +
Sbjct: 457 VPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLT 516
Query: 353 SQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVI-------------------- 392
++ +GVE + T+++L+ G C AG A+ L +M++
Sbjct: 517 REIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQ 576
Query: 393 -----------------KSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVF 435
+ PDV+ +T +I GL + ++ + L + M+ A I PS+
Sbjct: 577 GKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIA 636
Query: 436 TVSSLIH 442
T S LI+
Sbjct: 637 TWSVLIN 643
Score = 150 bits (378), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 167/342 (48%), Gaps = 8/342 (2%)
Query: 236 KVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVF 295
+VG A F + +FG P++ +YN ++D + + +M++ P+VF
Sbjct: 123 QVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVF 182
Query: 296 TYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM 355
TYN+L+K LC +++GA+ LL +M +G + V+Y ++I C+ G +++ ++
Sbjct: 183 TYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEG----REL 238
Query: 356 TEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNM 415
E+ EP V +++LI+G CK + A L EMV K + P+V+ ++ LI+ L G +
Sbjct: 239 AER-FEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQI 297
Query: 416 KETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVL 475
+ +ML+ P+++T+SSL+ G F G +AL+ + G PN V
Sbjct: 298 ELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLW---NQMIRGFGLQPNVVA 354
Query: 476 YAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMI 535
Y ++Q C G I+KA +FS M P+ TY +++ G + + + + M+
Sbjct: 355 YNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKML 414
Query: 536 KMGIVPDAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSS 577
G P+ V+ MV + K A E + + S
Sbjct: 415 TSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPS 456
Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 139/295 (47%), Gaps = 6/295 (2%)
Query: 51 NPSVFSTLIIAFSEMGHIEEALWVYRKIEVL---PAIQACNALLNGLIKKGKFDSVWEFY 107
N ++TL+ F G+I +A+ V+ +E + P I+ +L+NG K+G D +
Sbjct: 351 NVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIW 410
Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
+M+ G +VV Y +++ C +A +L + M + P+V + I GLC+
Sbjct: 411 NKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDA 470
Query: 168 NKMVEAESMFRSM-RECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVT 226
++ AE +FR M ++ PN+ TYN L+DG K + A E+ ++ + T
Sbjct: 471 GRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSST 530
Query: 227 FGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEME 286
+ L+ G C G A M G P+ N +I +CK G A + +
Sbjct: 531 YNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVS 590
Query: 287 --KFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGY 339
+ + PDV +Y +I GLC E LL++M GI+ ++ T++ LI+ +
Sbjct: 591 CGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCF 645
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 88/206 (42%), Gaps = 10/206 (4%)
Query: 52 PSV--FSTLIIAFSEMGHIEEALWVYRKIE----VLPAIQACNALLNGLIKKGKFDSVWE 105
PSV F+ I + G ++ A V+R++E P I N LL+GL K + + +
Sbjct: 455 PSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYG 514
Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLC 165
E+ + G+ TY L+ C G AL L +M+ G P + ++I C
Sbjct: 515 LTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYC 574
Query: 166 NENKMVEAESMFRSMRECG---VVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQP 222
+ K A M + CG P++ +Y ++ G C+ + M+ + P
Sbjct: 575 KQGKAERAAQML-DLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVP 633
Query: 223 NVVTFGVLMDGLCKVGELRAAGNFFV 248
++ T+ VL++ +RA F +
Sbjct: 634 SIATWSVLINCFILDDIVRAHDQFTI 659
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 76/163 (46%), Gaps = 6/163 (3%)
Query: 51 NPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFDSVWEFY 107
N ++ L+ ++ IEEA + R+I V + N LL+G G +
Sbjct: 492 NIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLV 551
Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMI--DKGIEPTVVIYTILIHGLC 165
+M++ G D +T ++I C QG +A + D + + P V+ YT +I GLC
Sbjct: 552 GKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLC 611
Query: 166 NENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRA 208
N + + M G+VP++ T++ L++ + + D+ RA
Sbjct: 612 RSNCREDGVILLERMISAGIVPSIATWSVLINCFI-LDDIVRA 653
>sp|Q9ZVX5|PP156_ARATH Pentatricopeptide repeat-containing protein At2g16880
OS=Arabidopsis thaliana GN=At2g16880 PE=2 SV=1
Length = 743
Score = 236 bits (601), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 147/554 (26%), Positives = 270/554 (48%), Gaps = 46/554 (8%)
Query: 48 PKFNPSVFSTLIIAFSEMGHIEEALWVYRK---IEVLPAIQACNALLNGLIK---KGKFD 101
P + ++F + A+ G AL +++K +++ P + CN LL GL++
Sbjct: 127 PPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIS 186
Query: 102 SVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDK-GIEPTVVIYTIL 160
S E +++MV G+ +V T+ VL++ C +G + AL + + M+ + + P V Y +
Sbjct: 187 SAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTI 246
Query: 161 IHGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNL 220
+ + + ++ + + + M++ G+VPN TYN L+ GYCK+ + A + M N+
Sbjct: 247 LKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNV 306
Query: 221 QPNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMS 280
P++ T+ +L++GLC G +R M + P++ YN LIDG + G EA
Sbjct: 307 LPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARK 366
Query: 281 LCSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYK-EGILANVVTYNSLIDGY 339
L +ME + + T+NI +K LC + E ++++ G ++VTY++LI Y
Sbjct: 367 LMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAY 426
Query: 340 CKEGDMEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDV 399
K GD+ AL + +M +KG++ N +T ++++D CK +D A L + + D
Sbjct: 427 LKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDE 486
Query: 400 VVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLE 459
V + LI G ++ +++ L ++ EM + KITP+V T +SLI GL +G+ A+ E
Sbjct: 487 VTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAM----E 542
Query: 460 KTDKTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDN----------- 508
K D+ P+ + +II C +G++ KA + +++ + +PDN
Sbjct: 543 KFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLC 602
Query: 509 -----------------------CTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVI 545
TY TM+ + K++ + LL++M + G+ PD
Sbjct: 603 KEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFT 662
Query: 546 NQVMVRGYQENGDL 559
+ E+G L
Sbjct: 663 YNSFISLLMEDGKL 676
Score = 191 bits (485), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 142/490 (28%), Positives = 225/490 (45%), Gaps = 64/490 (13%)
Query: 51 NPSVFSTLIIAFSEMGHIEEALWV---YRKIEVLPAIQACNALLNGLIKKGKFDSVWEFY 107
N ++ L+ + ++G ++EA + ++ VLP + N L+NGL G E
Sbjct: 274 NRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELM 333
Query: 108 EEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNE 167
+ M L DVVTY LID C G ++A L ++M + G++ V + I + LC E
Sbjct: 334 DAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKE 393
Query: 168 NKMVEAESMFRSMREC----GVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPN 223
K E++ R ++E G P++ TY+ L+ Y KV D++ ALE EM ++ N
Sbjct: 394 EK---REAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMN 450
Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
+T ++D LCK +L A N K G + Y LI G + + +A+ +
Sbjct: 451 TITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWD 510
Query: 284 EMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEG 343
EM+K +I+P V T+N LI GLC G+ E A ++ + G+L + T+NS+I GYCKEG
Sbjct: 511 EMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEG 570
Query: 344 DMEKALS-----------------------VCSQ-MTEKGV----------EPNVVTFSS 369
+EKA +C + MTEK + E + VT+++
Sbjct: 571 RVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNT 630
Query: 370 LIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAK 429
+I CK + A L +EM K L PD + + I L +DG + ET L K+
Sbjct: 631 MISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKK----- 685
Query: 430 ITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNH--VLYAAIIQALCYDG 487
G F G + L EK T N + Y+ +I LC G
Sbjct: 686 -----------FSGKF--GSMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDELCSRG 732
Query: 488 QILKASKLFS 497
++ + S+ ++
Sbjct: 733 RLKEHSRSYT 742
Score = 156 bits (394), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 105/344 (30%), Positives = 166/344 (48%), Gaps = 18/344 (5%)
Query: 50 FNPSV--FSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVW 104
F+P + + TLI A+ ++G + AL + R++ + N +L+ L K+ K D
Sbjct: 412 FSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAH 471
Query: 105 EFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGL 164
G + D VTYG LI + V KAL ++DEM I PTV + LI GL
Sbjct: 472 NLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGL 531
Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNV 224
C+ K A F + E G++P+ T+N+++ GYCK V +A EFY+E + H+ +P+
Sbjct: 532 CHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDN 591
Query: 225 VTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSE 284
T +L++GLCK G A NFF + + + YN +I CK L EA L SE
Sbjct: 592 YTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTV-TYNTMISAFCKDKKLKEAYDLLSE 650
Query: 285 MEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGD 344
ME+ + PD FTYN I L G+L + LL+K ++ ++
Sbjct: 651 MEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKK------------FSGKFGSMKRDLQ 698
Query: 345 MEKALSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYT 388
+E + + +++ + + +S +ID C G + YT
Sbjct: 699 VETEKNPATSESKEELNTEAIAYSDVIDELCSRGRLKEHSRSYT 742
Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 153/314 (48%), Gaps = 11/314 (3%)
Query: 257 PNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCGVGQ---LEGA 313
P+ +++ + + G A+ + +M + ++ P++ T N L+ GL + A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 314 EGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQM-TEKGVEPNVVTFSSLID 372
+ M K G+ NV T+N L++GYC EG +E AL + +M +E V P+ VT+++++
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248
Query: 373 GQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITP 432
K G + L +M LVP+ V + L+ G K G++KE ++ + M + + P
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP 308
Query: 433 SVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYD-GQILK 491
+ T + LI+GL G + LE D P+ V Y +I C++ G L+
Sbjct: 309 DLCTYNILINGLCNAGSMREG----LELMDAMKSLKLQPDVVTYNTLIDG-CFELGLSLE 363
Query: 492 ASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKM-GIVPDAVINQVMV 550
A KL M +D ++ + T+ L+ L + ++ V + +++ M G PD V ++
Sbjct: 364 ARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLI 423
Query: 551 RGYQENGDLKSAFR 564
+ Y + GDL A
Sbjct: 424 KAYLKVGDLSGALE 437
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 103/202 (50%), Gaps = 12/202 (5%)
Query: 381 DAAMGLYTEMVIKSL----VPDVVVFTALIDGLSKDGNMKETLRLYKEMLEAKITPSVFT 436
DA++ L ++ +L P +F + +G L+++++M+ K+ P++ T
Sbjct: 109 DASLSLCNSLLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLT 168
Query: 437 VSSLIHGLFK---NGRISNALNFFLEKTDKTDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
++L+ GL + + IS+A F D G S N + ++ C +G++ A
Sbjct: 169 CNTLLIGLVRYPSSFSISSAREVF---DDMVKIG-VSLNVQTFNVLVNGYCLEGKLEDAL 224
Query: 494 KLFSDMRSD-NLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRG 552
+ M S+ + PDN TY T+L+ + + R+ D+ LL DM K G+VP+ V +V G
Sbjct: 225 GMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYG 284
Query: 553 YQENGDLKSAFRCSEFLKESRI 574
Y + G LK AF+ E +K++ +
Sbjct: 285 YCKLGSLKEAFQIVELMKQTNV 306
>sp|Q0WPZ6|PP158_ARATH Pentatricopeptide repeat-containing protein At2g17140
OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1
Length = 874
Score = 234 bits (597), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 171/631 (27%), Positives = 280/631 (44%), Gaps = 106/631 (16%)
Query: 25 LLKSRKPHHVCYSVFNALNSLEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKI-----E 79
+L K H + N + S I K S +++ F++ HI++A ++ + E
Sbjct: 48 ILVRAKMHEEIQELHNLILSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPE 107
Query: 80 VLPAIQACNALLNGLIKKGKFDSVWEFYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKAL 139
P++ N LL IK+ + + V Y++MVLCG+ T+ +LI C V A
Sbjct: 108 NKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAR 167
Query: 140 NLFDEM------------------------IDKGIE-----------PTVVIYTILIHGL 164
LFDEM DKG+E P VIY ++
Sbjct: 168 ELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSF 227
Query: 165 CNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEM-LHHNL--- 220
C E + ++E M MRE G+VP++ T+N+ + CK V A + +M L L
Sbjct: 228 CREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLP 287
Query: 221 QPNVVTFGVLMDGLCKVGELRAAGNFF----------------------VHMAKF----- 253
+PN +T+ +++ G CKVG L A F V KF
Sbjct: 288 RPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAET 347
Query: 254 --------GVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLC 305
G+ P+I+ YN L+DG CK G L +A ++ M++ + PD TY L+ G C
Sbjct: 348 VLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYC 407
Query: 306 GVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGVEPNVV 365
VG+++ A+ LLQ+M + L N T N L+ K G + +A + +M EKG + V
Sbjct: 408 SVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTV 467
Query: 366 TFSSLIDGQCKAGNIDAAMGL------------------YTEMVIKSLV-----PDVVVF 402
T + ++DG C +G +D A+ + Y +V SL+ PD++ +
Sbjct: 468 TCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITY 527
Query: 403 TALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTD 462
+ L++GL K G E L+ EM+ K+ P + IH K G+IS+A +
Sbjct: 528 STLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEK 587
Query: 463 KTDGGYCSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAK 522
K C + Y ++I L QI + L +M+ + P+ CTY T ++ L +
Sbjct: 588 KG----CHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGE 643
Query: 523 RMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
++ D LL +M++ I P+ + ++ +
Sbjct: 644 KVEDATNLLDEMMQKNIAPNVFSFKYLIEAF 674
Score = 221 bits (563), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 138/473 (29%), Positives = 229/473 (48%), Gaps = 31/473 (6%)
Query: 119 VVTYGVLIDCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFR 178
V Y +L++ C + V L+ +M+ GI P + +LI LC+ + + A +F
Sbjct: 112 VYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFD 171
Query: 179 SMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVG 238
M E G PN +T+ L+ GYCK ++ LE + M + PN V + ++ C+ G
Sbjct: 172 EMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREG 231
Query: 239 ELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEI----SPDV 294
+ M + G+ P+I +N I CK G + +A + S+ME E P+
Sbjct: 232 RNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNS 291
Query: 295 FTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQ 354
TYN+++KG C VG LE A+ L + + + LA++ +YN + G + G +A +V Q
Sbjct: 292 ITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQ 351
Query: 355 MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGN 414
MT+KG+ P++ +++ L+DG CK G + A + M + PD V + L+ G G
Sbjct: 352 MTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGK 411
Query: 415 MKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGYCSPNHV 474
+ L +EM+ P+ +T + L+H L+K GRIS A + +K GY + V
Sbjct: 412 VDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEK---GY-GLDTV 467
Query: 475 LYAAIIQALCYDGQILKASKLFSDMR-----------------------SDNLRPDNCTY 511
I+ LC G++ KA ++ MR +N PD TY
Sbjct: 468 TCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITY 527
Query: 512 TTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGYQENGDLKSAFR 564
+T+L GL +A R + L A+M+ + PD+V + + + + G + SAFR
Sbjct: 528 STLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFR 580
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 152/609 (24%), Positives = 259/609 (42%), Gaps = 95/609 (15%)
Query: 49 KFNPSVFSTLIIAFSEMGHIEEALWVYRKIE---VLPAIQACNALLNGLIKKGKFDSVWE 105
K N F L+ + + G ++ L + +E VLP N +++ ++G+ D +
Sbjct: 179 KPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEK 238
Query: 106 FYEEMVLCGLVADVVTYGVLIDCCCGQGDVMKALNLFDEM-IDKGI---EPTVVIYTILI 161
E+M GLV D+VT+ I C +G V+ A +F +M +D+ + P + Y +++
Sbjct: 239 MVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLML 298
Query: 162 HGLCNENKMVEAESMFRSMRECGVVPNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQ 221
G C + +A+++F S+RE + +L +YN + G + A +M +
Sbjct: 299 KGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIG 358
Query: 222 PNVVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSL 281
P++ ++ +LMDGLCK+G L A M + GV P+ Y CL+ G+C G + A SL
Sbjct: 359 PSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSL 418
Query: 282 CSEMEKFEISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCK 341
EM + P+ +T NIL+ L +G++ AE LL+KM ++G + VT N ++DG C
Sbjct: 419 LQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCG 478
Query: 342 EGDMEKALSVCSQMTEKGVE-----------------------PNVVTFSSLIDGQCKAG 378
G+++KA+ + M G P+++T+S+L++G CKAG
Sbjct: 479 SGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAG 538
Query: 379 NIDAAMGLYTEMVIKSLVPDVV-----------------------------------VFT 403
A L+ EM+ + L PD V +
Sbjct: 539 RFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYN 598
Query: 404 ALIDGLSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDK 463
+LI GL + E L EM E I+P++ T ++ I L + ++ +A N E K
Sbjct: 599 SLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQK 658
Query: 464 ------------------------------TDGGYCSPNHVLYAAIIQALCYDGQILKAS 493
T C LY+ + L GQ+LKA+
Sbjct: 659 NIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKAT 718
Query: 494 KLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVPDAVINQVMVRGY 553
+L + Y ++ L + + +L MI G D ++ G
Sbjct: 719 ELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGL 778
Query: 554 QENGDLKSA 562
+ G+ K A
Sbjct: 779 GKMGNKKEA 787
Score = 172 bits (435), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 116/408 (28%), Positives = 198/408 (48%), Gaps = 13/408 (3%)
Query: 187 PNLYTYNALMDGYCKVADVNRALEFYHEMLHHNLQPNVVTFGVLMDGLCKVGELRAAGNF 246
P++Y YN L++ K V Y +M+ + P TF +L+ LC + AA
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 247 FVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCSEMEKFEISPDVFTYNILIKGLCG 306
F M + G PN F + L+ G+CKAG + + L + ME F + P+ YN ++ C
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCR 229
Query: 307 VGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKALSVCSQMTEKGV----EP 362
G+ + +E +++KM +EG++ ++VT+NS I CKEG + A + S M P
Sbjct: 230 EGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRP 289
Query: 363 NVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDGLSKDGNMKETLRLY 422
N +T++ ++ G CK G ++ A L+ + + + + + GL + G E +
Sbjct: 290 NSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVL 349
Query: 423 KEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFF-LEKTDKTDGGYCSPNHVLYAAIIQ 481
K+M + I PS+++ + L+ GL K G +S+A L K + G C P+ V Y ++
Sbjct: 350 KQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRN----GVC-PDAVTYGCLLH 404
Query: 482 ALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVMMLLADMIKMGIVP 541
C G++ A L +M +N P+ T +L L + R+ + LL M + G
Sbjct: 405 GYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGL 464
Query: 542 DAVINQVMVRGYQENGDLKSAFRCSEFLKESRIGSSETEGHTTRSFLG 589
D V ++V G +G+L A E +K R+ S G+ S++G
Sbjct: 465 DTVTCNIIVDGLCGSGELDKAI---EIVKGMRVHGSAALGNLGNSYIG 509
Score = 155 bits (393), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 134/542 (24%), Positives = 213/542 (39%), Gaps = 140/542 (25%)
Query: 45 LEIPKFNPSVFSTLIIAFSEMGHIEEALWVYRKI---EVLPAIQACNALLNGLIKKGKFD 101
L +P+ N ++ ++ F ++G +E+A ++ I + L ++Q+ N L GL++ GKF
Sbjct: 284 LGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFI 343
Query: 102 SVWEFYEEMV-----------------LC------------------GLVADVVTYGVLI 126
++M LC G+ D VTYG L+
Sbjct: 344 EAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLL 403
Query: 127 DCCCGQGDVMKALNLFDEMIDKGIEPTVVIYTILIHGLCNENKMVEAESMFRSMRECGVV 186
C G V A +L EM+ P IL+H L ++ EAE + R M E G
Sbjct: 404 HGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYG 463
Query: 187 PNLYTYNALMDGYCKVADVNRALEFYHEMLHH-----------------------NLQPN 223
+ T N ++DG C ++++A+E M H N P+
Sbjct: 464 LDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPD 523
Query: 224 VVTFGVLMDGLCKVGELRAAGNFFVHMAKFGVFPNIFVYNCLIDGHCKAGNLFEAMSLCS 283
++T+ L++GLCK G A N F M + P+ YN I CK G + A +
Sbjct: 524 LITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLK 583
Query: 284 EMEK-----------------------FEI------------SPDVFTYNILIKGLCGVG 308
+MEK FEI SP++ TYN I+ LC
Sbjct: 584 DMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGE 643
Query: 309 QLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDM-------EKALSVCSQ------- 354
++E A LL +M ++ I NV ++ LI+ +CK D E A+S+C Q
Sbjct: 644 KVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSL 703
Query: 355 --------------------MTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKS 394
+ ++G E + L++ CK ++ A G+ +M+ +
Sbjct: 704 MFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRG 763
Query: 395 LVPDVVVFTALIDGLSKDGNMKETLRLYKEMLEA--------KITPSVFTVSSLIHGLFK 446
D +IDGL K GN KE +M+E K+ P+ + H K
Sbjct: 764 YGFDPAALMPVIDGLGKMGNKKEANSFADKMMEMASVGEVANKVDPNARDIHQKKHN--K 821
Query: 447 NG 448
NG
Sbjct: 822 NG 823
Score = 116 bits (290), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 128/274 (46%)
Query: 289 EISPDVFTYNILIKGLCGVGQLEGAEGLLQKMYKEGILANVVTYNSLIDGYCKEGDMEKA 348
E P V+ YN+L++ ++E L + M GI T+N LI C ++ A
Sbjct: 107 ENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAA 166
Query: 349 LSVCSQMTEKGVEPNVVTFSSLIDGQCKAGNIDAAMGLYTEMVIKSLVPDVVVFTALIDG 408
+ +M EKG +PN TF L+ G CKAG D + L M ++P+ V++ ++
Sbjct: 167 RELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSS 226
Query: 409 LSKDGNMKETLRLYKEMLEAKITPSVFTVSSLIHGLFKNGRISNALNFFLEKTDKTDGGY 468
++G ++ ++ ++M E + P + T +S I L K G++ +A F + G
Sbjct: 227 FCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGL 286
Query: 469 CSPNHVLYAAIIQALCYDGQILKASKLFSDMRSDNLRPDNCTYTTMLRGLLRAKRMLDVM 528
PN + Y +++ C G + A LF +R ++ +Y L+GL+R + ++
Sbjct: 287 PRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAE 346
Query: 529 MLLADMIKMGIVPDAVINQVMVRGYQENGDLKSA 562
+L M GI P +++ G + G L A
Sbjct: 347 TVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDA 380
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.139 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 216,609,681
Number of Sequences: 539616
Number of extensions: 8955997
Number of successful extensions: 34811
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 455
Number of HSP's successfully gapped in prelim test: 52
Number of HSP's that attempted gapping in prelim test: 20788
Number of HSP's gapped (non-prelim): 3291
length of query: 605
length of database: 191,569,459
effective HSP length: 123
effective length of query: 482
effective length of database: 125,196,691
effective search space: 60344805062
effective search space used: 60344805062
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 64 (29.3 bits)