BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036305
(515 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 131/467 (28%), Positives = 208/467 (44%), Gaps = 39/467 (8%)
Query: 60 NMFDLGTVPHRTLTELRQKYGDVIWLKFGAINTMVILSAKAATDFFKNHDSTFAERK--V 117
++ LG PH L+ + Q+YGDV+ ++ G+ +V+ F R
Sbjct: 29 HVLTLGKNPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQGDDFKGRPDLY 88
Query: 118 TETMRVHGYDKSSLALAP-YGAFWRVLRRLVTVEMLVTKRINETASVRRKCVNDMLLWIE 176
T T+ D SL + G W RRL L T I + C + +
Sbjct: 89 TSTLIT---DGQSLTFSTDSGPVWAARRRLAQ-NALNTFSIASDPASSSSCYLEE--HVS 142
Query: 177 QEASGVHVARL---------------VFLSTFNLLGNLMLSRDLLDRESNDGAEFFQAMM 221
+EA + ++RL V +S N++G + + + S++ +
Sbjct: 143 KEAKAL-ISRLQELMAGPGHFDPYNQVVVSVANVIGAMCFGQHFPE-SSDEMLSLVKNTH 200
Query: 222 GLMEWSGHANLADFFPILRRLDPQGLRRKMERDVGKALEIASKFVKERLEQKDKNVTGTS 281
+E + N DFFPILR L L+R + + L K V+E + DKN
Sbjct: 201 EFVETASSGNPLDFFPILRYLPNPALQRFKAFN-QRFLWFLQKTVQEHYQDFDKNSV--- 256
Query: 282 DEKRKDFLDVMLDFEGNGKDEPAKV--SEKDLNIFILEIFLAGSETTSSTIEWALTELLT 339
+D + G + EK +N+ + +IF AG +T ++ I W+L L+T
Sbjct: 257 ----RDITGALFKHSKKGPRASGNLIPQEKIVNL-VNDIFGAGFDTVTTAISWSLMYLVT 311
Query: 340 NPESLNKAKAELAQAVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTN 399
PE K + EL +G +R D LPYL+A I ET R +PF +P DT
Sbjct: 312 KPEIQRKIQKELDTVIGRERRPRLSDRPQLPYLEAFILETFRHSSFLPFTIPHSTTRDTT 371
Query: 400 FQGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPERFLGS--TVDYKGQNYELIPFGAGR 457
G++IPK V VN W + DPE+W++P F+PERFL + T K + +++ FG G+
Sbjct: 372 LNGFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPERFLTADGTAINKPLSEKMMLFGMGK 431
Query: 458 RMCAGVPLAHRMLHLILGSLLHQFDWELDCKEEIDMNDRMGITVRKA 504
R C G LA + L L LL Q ++ + ++D+ G+T++ A
Sbjct: 432 RRCIGEVLAKWEIFLFLAILLQQLEFSVPPGVKVDLTPIYGLTMKHA 478
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 133/465 (28%), Positives = 210/465 (45%), Gaps = 34/465 (7%)
Query: 60 NMFDLGTVPHRTLTELRQKYGDVIWLKFGAINTMVILSAKAATDFFKNHDSTFAERK--V 117
+M LG PH L+ + Q+YGDV+ ++ G+ +V+ F R
Sbjct: 24 HMLTLGKNPHLALSRMSQQYGDVLQIRIGSTPVVVLSGLDTIRQALVRQGDDFKGRPDLY 83
Query: 118 TETMRVHGYDKSSLALAP-YGAFWRVLRRLVTVEM----LVTKRINETASVRRKCVN--- 169
T T+ +G S++ +P G W RRL + + + + T+ + V+
Sbjct: 84 TFTLISNG---QSMSFSPDSGPVWAARRRLAQNGLKSFSIASDPASSTSCYLEEHVSKEA 140
Query: 170 DMLLWIEQE--ASGVHV--ARLVFLSTFNLLGNLMLSRDLLDRESNDGAEFFQAMMGLME 225
++L+ QE A H R V +S N++ + R D + E
Sbjct: 141 EVLISTLQELMAGPGHFNPYRYVVVSVTNVICAICFGRRY-DHNHQELLSLVNLNNNFGE 199
Query: 226 WSGHANLADFFPILRRLDPQGLRRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKR 285
G N ADF PILR L L + + K K VKE + +K
Sbjct: 200 VVGSGNPADFIPILRYLPNPSLNAFKDLN-EKFYSFMQKMVKEHYKTFEKG-------HI 251
Query: 286 KDFLDVMLDF-EGNGKDEPAKVS---EKDLNIFILEIFLAGSETTSSTIEWALTELLTNP 341
+D D +++ + DE A V EK +NI +L++F AG +T ++ I W+L L+ NP
Sbjct: 252 RDITDSLIEHCQEKQLDENANVQLSDEKIINI-VLDLFGAGFDTVTTAISWSLMYLVMNP 310
Query: 342 ESLNKAKAELAQAVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQ 401
K + EL +G R D +LPY++A I ET R +PF +P DT+ +
Sbjct: 311 RVQRKIQEELDTVIGRSRRPRLSDRSHLPYMEAFILETFRHSSFVPFTIPHSTTRDTSLK 370
Query: 402 GYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPERFLG--STVDYKGQNYELIPFGAGRRM 459
G++IPK V VN W I D ++W P F PERFL +D K + ++I FG G+R
Sbjct: 371 GFYIPKGRCVFVNQWQINHDQKLWVNPSEFLPERFLTPDGAID-KVLSEKVIIFGMGKRK 429
Query: 460 CAGVPLAHRMLHLILGSLLHQFDWELDCKEEIDMNDRMGITVRKA 504
C G +A + L L LL + ++ + ++DM G+T++ A
Sbjct: 430 CIGETIARWEVFLFLAILLQRVEFSVPLGVKVDMTPIYGLTMKHA 474
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 122/435 (28%), Positives = 199/435 (45%), Gaps = 35/435 (8%)
Query: 69 HRTLTELRQKYGDVIWLKFGAINTMVILSAKAATDFFKNHDSTFAERKVTETMRVHGYDK 128
H +L++KYG + ++ G T+++ + A + F+ R T+ + ++
Sbjct: 32 HNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMATLDIASNNR 91
Query: 129 SSLALAPYGAFWRVLRRLVTVEMLVTK----RINETASVRRKCVNDMLLWIEQEASGVHV 184
+A A GA W++ RRL + K ++ + + DML + +
Sbjct: 92 KGIAFADSGAHWQLHRRLAMATFALFKDGDQKLEKIICQEISTLCDML--ATHNGQSIDI 149
Query: 185 ARLVFLSTFNLLGNLMLSRDLL--DRESNDGAEFFQAMMGLMEWSGHANLADFFPILRRL 242
+ VF++ N++ + + D E N + + G+++ +L D P L+
Sbjct: 150 SFPVFVAVTNVISLICFNTSYKNGDPELNVIQNYNE---GIIDNLSKDSLVDLVPWLKIF 206
Query: 243 DPQGLRRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDF------- 295
K LE VK R + +K + ++ R D + MLD
Sbjct: 207 P------------NKTLEKLKSHVKIRNDLLNKILENYKEKFRSDSITNMLDTLMQAKMN 254
Query: 296 EGNGKDEPAKVSE--KDLNIF--ILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAEL 351
NG P + SE D +I I +IF AG ETT+S ++W L LL NP+ K E+
Sbjct: 255 SDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEI 314
Query: 352 AQAVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQV 411
Q VG RT D + L L+A I+E LRL P P L+P +A D++ + + K T+V
Sbjct: 315 DQNVGFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEV 374
Query: 412 LVNAWAIGRDPEVWDEPWSFKPERFLG-STVDYKGQNYELIPFGAGRRMCAGVPLAHRML 470
++N WA+ + + W +P F PERFL + + +PFGAG R C G LA + L
Sbjct: 375 IINLWALHHNEKEWHQPDQFMPERFLNPAGTQLISPSVSYLPFGAGPRSCIGEILARQEL 434
Query: 471 HLILGSLLHQFDWEL 485
LI+ LL +FD E+
Sbjct: 435 FLIMAWLLQRFDLEV 449
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 121/462 (26%), Positives = 203/462 (43%), Gaps = 30/462 (6%)
Query: 60 NMFDLGTVPHRTLTELRQKYGDVIWLKFGAINTMVILSAKAATDFFKNHDSTFAERKVTE 119
N +G H + L ++YGDV ++ G+ +V+ +A S FA+R
Sbjct: 22 NAAAVGQAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQQGSAFADRPSFA 81
Query: 120 TMRVHGYDKSSLALAPYGAFWRVLRRLVTVEM--LVTKRINETASVRRKCVND----MLL 173
+ RV +S +A Y W+V RR M T++ + +++ + L
Sbjct: 82 SFRVVSGGRS-MAFGHYSEHWKVQRRAAHSMMRNFFTRQPRSRQVLEGHVLSEARELVAL 140
Query: 174 WIEQEASGVHVARLVFLS----TFNLLGNLMLSRDLLDRESNDGAEFFQAMMGLMEWS-- 227
+ A G FL T + N+M + R S+D EF + + E+
Sbjct: 141 LVRGSADGA------FLDPRPLTVVAVANVMSAVCFGCRYSHDDPEFRELLSHNEEFGRT 194
Query: 228 -GHANLADFFPILRRLDPQGLRRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRK 286
G +L D P L+ P +R + R+ + S F+ ++ + +++ + +
Sbjct: 195 VGAGSLVDVMPWLQYF-PNPVR-TVFREFEQLNRNFSNFILDKFLRHCESLRPGAAPR-- 250
Query: 287 DFLDVML-----DFEGNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNP 341
D +D + G+ A++ +++ I +IF A +T S+ ++W L P
Sbjct: 251 DMMDAFILSAEKKAAGDSHGGGARLDLENVPATITDIFGASQDTLSTALQWLLLLFTRYP 310
Query: 342 ESLNKAKAELAQAVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQ 401
+ + +AEL Q VG DR D NLPY+ A + E +R +P +P +T+
Sbjct: 311 DVQTRVQAELDQVVGRDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVL 370
Query: 402 GYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPERFLGS-TVDYKGQNYELIPFGAGRRMC 460
GYHIPKDT V VN W++ DP W P +F P RFL + K ++ F G+R C
Sbjct: 371 GYHIPKDTVVFVNQWSVNHDPLKWPNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRC 430
Query: 461 AGVPLAHRMLHLILGSLLHQFDWELDCKEEIDMNDRMGITVR 502
G L+ L L + L HQ D+ + E MN G+T++
Sbjct: 431 IGEELSKMQLFLFISILAHQCDFRANPNEPAKMNFSYGLTIK 472
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 121/447 (27%), Positives = 196/447 (43%), Gaps = 46/447 (10%)
Query: 70 RTLTELRQKYGDVIWLKFGAINTMVILSAKAATDFFKNHDSTFAERKVTETMR--VHGYD 127
R+ LR+KYGDV + G+ +V+ A + + F+ R + GY
Sbjct: 34 RSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDPIFQGYG 93
Query: 128 KSSLALAPYGAFWRVLRRLVTVEML--------VTKRINETASV-------RRKCVNDML 172
+ G WR LRR M V +RI E A + + D
Sbjct: 94 ----VIFANGERWRALRRFSLATMRDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNT 149
Query: 173 LWIEQEASGVHVARLVFLSTFNLLGNLMLSRDLLDRESNDGAEFFQAMMGLME-WSGHAN 231
L S + + +VF F+ + L LLD + + E +SG
Sbjct: 150 LLFHSITSNI-ICSIVFGKRFDYKDPVFLR--LLDLFFQSFSLISSFSSQVFELFSG--- 203
Query: 232 LADFFPILRRLDPQGLRRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDV 291
+FP G R++ R+ L+ + F+ + +E+ + ++ +DF+DV
Sbjct: 204 FLKYFP--------GTHRQIYRN----LQEINTFIGQSVEKHRATLDPSNP---RDFIDV 248
Query: 292 -MLDFEGNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAE 350
+L E + D ++ ++L + +L +F AG+ETTS+T+ + +L P + + E
Sbjct: 249 YLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKE 308
Query: 351 LAQAVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQ 410
+ Q +G+ R DD +PY AVI E RL IPF VP +DT F+GY IPK+T+
Sbjct: 309 IEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTE 368
Query: 411 VLVNAWAIGRDPEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRML 470
V + DP ++ P +F P FL + K +N +PF G+R+CAG +A L
Sbjct: 369 VFPVLSSALHDPRYFETPNTFNPGHFLDANGALK-RNEGFMPFSLGKRICAGEGIARTEL 427
Query: 471 HLILGSLLHQFDWELDC-KEEIDMNDR 496
L ++L F E+ID+ R
Sbjct: 428 FLFFTTILQNFSIASPVPPEDIDLTPR 454
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 121/473 (25%), Positives = 205/473 (43%), Gaps = 41/473 (8%)
Query: 60 NMFDLGT---VPHRTLTELRQKYGDVIWLKFGAINTMVILSAKAATDFFKNHDSTFAERK 116
N++ L +PH + + Q YG++ L G I+T+V+ + + FA+R
Sbjct: 25 NIYSLAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRP 84
Query: 117 VTETMRVHGYDKSSLALAPYGAFWRVLRRLVTVEM---------LVTKRINETASVRRKC 167
+ + L + YG W RRL +K + ET K
Sbjct: 85 CL-PLFMKMTKMGGLLNSRYGRGWVDHRRLAVNSFRYFGYGQKSFESKILEET-----KF 138
Query: 168 VNDMLLWIEQEASGVHVARLVFLSTFNLLGNLMLSRDLLDRESNDGAEFFQAMMGL---- 223
ND IE + + + + + NL++ + E D FQ M+ L
Sbjct: 139 FNDA---IETYKGRPFDFKQLITNAVSNITNLIIFGERFTYEDTD----FQHMIELFSEN 191
Query: 224 --MEWSGHANLADFFPILRRLDPQGLRRKMERDVGKALEIASKFVKERLEQKDKNVTGTS 281
+ S L + FP + L P G +++ R+ + S+ + +K
Sbjct: 192 VELAASASVFLYNAFPWIGIL-PFGKHQQLFRNAAVVYDFLSRLI-------EKASVNRK 243
Query: 282 DEKRKDFLDVMLDFEGNGKDEPAKVSEKDLNIF-ILEIFLAGSETTSSTIEWALTELLTN 340
+ + F+D LD GK++P+ K+ IF + E+ +AG+ETT++ + WA+ +
Sbjct: 244 PQLPQHFVDAYLDEMDQGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALY 303
Query: 341 PESLNKAKAELAQAVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNF 400
P + + E+ +G + DD +PY +AV+ E LR +P + ED
Sbjct: 304 PNIQGQVQKEIDLIMGPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVV 363
Query: 401 QGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMC 460
+GY IPK T V+ N +++ D + W +P F PERFL S+ Y + L+PF GRR C
Sbjct: 364 RGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDSS-GYFAKKEALVPFSLGRRHC 422
Query: 461 AGVPLAHRMLHLILGSLLHQFDWELDCKEEIDMNDRMGITVRKAEPLIAVPKR 513
G LA + L +LL +F + D+ R+G+T++ LI +R
Sbjct: 423 LGEHLARMEMFLFFTALLQRFHLHFPHELVPDLKPRLGMTLQPQPYLICAERR 475
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 121/473 (25%), Positives = 205/473 (43%), Gaps = 41/473 (8%)
Query: 60 NMFDLGT---VPHRTLTELRQKYGDVIWLKFGAINTMVILSAKAATDFFKNHDSTFAERK 116
N++ L +PH + + Q YG++ L G I+T+V+ + + FA+R
Sbjct: 25 NIYSLAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRP 84
Query: 117 VTETMRVHGYDKSSLALAPYGAFWRVLRRLVTVEM---------LVTKRINETASVRRKC 167
+ + L + YG W RRL +K + ET K
Sbjct: 85 CL-PLFMKMTKMGGLLNSRYGRGWVDHRRLAVNSFRYFGYGQKSFESKILEET-----KF 138
Query: 168 VNDMLLWIEQEASGVHVARLVFLSTFNLLGNLMLSRDLLDRESNDGAEFFQAMMGL---- 223
ND IE + + + + + NL++ + E D FQ M+ L
Sbjct: 139 FNDA---IETYKGRPFDFKQLITNAVSNITNLIIFGERFTYEDTD----FQHMIELFSEN 191
Query: 224 --MEWSGHANLADFFPILRRLDPQGLRRKMERDVGKALEIASKFVKERLEQKDKNVTGTS 281
+ S L + FP + L P G +++ R+ + S+ + +K
Sbjct: 192 VELAASASVFLYNAFPWIGIL-PFGKHQQLFRNAAVVYDFLSRLI-------EKASVNRK 243
Query: 282 DEKRKDFLDVMLDFEGNGKDEPAKVSEKDLNIF-ILEIFLAGSETTSSTIEWALTELLTN 340
+ + F+D LD GK++P+ K+ IF + E+ +AG+ETT++ + WA+ +
Sbjct: 244 PQLPQHFVDAYLDEMDQGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALY 303
Query: 341 PESLNKAKAELAQAVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNF 400
P + + E+ +G + DD +PY +AV+ E LR +P + ED
Sbjct: 304 PNIQGQVQKEIDLIMGPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVV 363
Query: 401 QGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMC 460
+GY IPK T V+ N +++ D + W +P F PERFL S+ Y + L+PF GRR C
Sbjct: 364 RGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDSS-GYFAKKEALVPFSLGRRHC 422
Query: 461 AGVPLAHRMLHLILGSLLHQFDWELDCKEEIDMNDRMGITVRKAEPLIAVPKR 513
G LA + L +LL +F + D+ R+G+T++ LI +R
Sbjct: 423 LGEHLARMEMFLFFTALLQRFHLHFPHELVPDLKPRLGMTLQPQPYLICAERR 475
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 120/447 (26%), Positives = 195/447 (43%), Gaps = 46/447 (10%)
Query: 70 RTLTELRQKYGDVIWLKFGAINTMVILSAKAATDFFKNHDSTFAERKVTETMR--VHGYD 127
R+ LR+KYGDV + G+ +V+ A + + F+ R + GY
Sbjct: 34 RSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDPIFQGYG 93
Query: 128 KSSLALAPYGAFWRVLRRLVTVEM--------LVTKRINETASV-------RRKCVNDML 172
+ G WR LRR M V +RI E A + + D
Sbjct: 94 ----VIFANGERWRALRRFSLATMRDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNT 149
Query: 173 LWIEQEASGVHVARLVFLSTFNLLGNLMLSRDLLDRESNDGAEFFQAMMGLME-WSGHAN 231
L S + + +VF F+ + L LLD + + E +SG
Sbjct: 150 LLFHSITSNI-ICSIVFGKRFDYKDPVFLR--LLDLFFQSFSLISSFSSQVFELFSG--- 203
Query: 232 LADFFPILRRLDPQGLRRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDV 291
+FP G R++ R+ L+ + F+ + +E+ + ++ +DF+DV
Sbjct: 204 FLKYFP--------GTHRQIYRN----LQEINTFIGQSVEKHRATLDPSNP---RDFIDV 248
Query: 292 -MLDFEGNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAE 350
+L E + D ++ ++L + +L +F AG+ETTS+T+ + +L P + + E
Sbjct: 249 YLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKE 308
Query: 351 LAQAVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQ 410
+ Q +G+ R DD +PY AVI E RL IPF VP +DT F+GY IPK+T+
Sbjct: 309 IEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTE 368
Query: 411 VLVNAWAIGRDPEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRML 470
V + DP ++ P +F P FL + K +N +PF G+R+C G +A L
Sbjct: 369 VFPVLSSALHDPRYFETPNTFNPGHFLDANGALK-RNEGFMPFSLGKRICLGEGIARTEL 427
Query: 471 HLILGSLLHQFDWELDC-KEEIDMNDR 496
L ++L F E+ID+ R
Sbjct: 428 FLFFTTILQNFSIASPVPPEDIDLTPR 454
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 118/446 (26%), Positives = 193/446 (43%), Gaps = 44/446 (9%)
Query: 70 RTLTELRQKYGDVIWLKFGAINTMVILSAKAATDFFKNHDSTFAERKVTETMR--VHGYD 127
R+ LR+KYGDV + G+ +V+ A + + F+ R + GY
Sbjct: 34 RSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDPIFQGYG 93
Query: 128 KSSLALAPYGAFWRVLRRLVTVEM--------LVTKRINETASV-------RRKCVNDML 172
+ G WR LRR M V +RI E A + + D
Sbjct: 94 ----VIFANGERWRALRRFSLATMRDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNT 149
Query: 173 LWIEQEASGVHVARLVFLSTFNLLGNLMLSRDLLDRESNDGAEFFQAMMGLMEWSGHANL 232
L S + + +VF F+ + L LLD + + E +
Sbjct: 150 LLFHSITSNI-ICSIVFGKRFDYKDPVFLR--LLDLFFQSFSLISSFSSQVFEL--FSGF 204
Query: 233 ADFFPILRRLDPQGLRRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDV- 291
+FP G R++ R+ L+ + F+ + +E+ + ++ +DF+DV
Sbjct: 205 LKYFP--------GTHRQIYRN----LQEINTFIGQSVEKHRATLDPSNP---RDFIDVY 249
Query: 292 MLDFEGNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAEL 351
+L E + D ++ ++L + +L +F AG+ETTS+T+ + +L P + + E+
Sbjct: 250 LLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEI 309
Query: 352 AQAVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQV 411
Q +G+ R DD +PY AVI E RL IPF VP +DT F+GY IPK+T+V
Sbjct: 310 EQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEV 369
Query: 412 LVNAWAIGRDPEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLH 471
+ DP ++ P +F P FL + K +N +PF G+R+C G +A L
Sbjct: 370 FPVLSSALHDPRYFETPNTFNPGHFLDANGALK-RNEGFMPFSLGKRICLGEGIARTELF 428
Query: 472 LILGSLLHQFDWELDC-KEEIDMNDR 496
L ++L F E+ID+ R
Sbjct: 429 LFFTTILQNFSIASPVPPEDIDLTPR 454
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 118/446 (26%), Positives = 193/446 (43%), Gaps = 44/446 (9%)
Query: 70 RTLTELRQKYGDVIWLKFGAINTMVILSAKAATDFFKNHDSTFAERKVTETMR--VHGYD 127
R+ LR+KYGDV + G+ +V+ A + + F+ R + GY
Sbjct: 34 RSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDPIFQGYG 93
Query: 128 KSSLALAPYGAFWRVLRRLVTVEM--------LVTKRINETASV-------RRKCVNDML 172
+ G WR LRR M V +RI E A + + D
Sbjct: 94 ----VIFANGERWRALRRFSLATMRDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNT 149
Query: 173 LWIEQEASGVHVARLVFLSTFNLLGNLMLSRDLLDRESNDGAEFFQAMMGLMEWSGHANL 232
L S + + +VF F+ + L LLD + + E +
Sbjct: 150 LLFHSITSNI-ICSIVFGKRFDYKDPVFLR--LLDLFFQSFSLISSFSSQVFEL--FSGF 204
Query: 233 ADFFPILRRLDPQGLRRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDV- 291
+FP G R++ R+ L+ + F+ + +E+ + ++ +DF+DV
Sbjct: 205 LKYFP--------GTHRQIYRN----LQEINTFIGQSVEKHRATLDPSNP---RDFIDVY 249
Query: 292 MLDFEGNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAEL 351
+L E + D ++ ++L + +L +F AG+ETTS+T+ + +L P + + E+
Sbjct: 250 LLRMEKDKSDPSSEFHHQNLILTVLSLFAAGTETTSTTLRYGFLLMLKYPHVTERVQKEI 309
Query: 352 AQAVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQV 411
Q +G+ R DD +PY AVI E RL IPF VP +DT F+GY IPK+T+V
Sbjct: 310 EQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEV 369
Query: 412 LVNAWAIGRDPEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLH 471
+ DP ++ P +F P FL + K +N +PF G+R+C G +A L
Sbjct: 370 FPVLSSALHDPRYFETPNTFNPGHFLDANGALK-RNEGFMPFSLGKRICLGEGIARTELF 428
Query: 472 LILGSLLHQFDWELDC-KEEIDMNDR 496
L ++L F E+ID+ R
Sbjct: 429 LFFTTILQNFSIASPVPPEDIDLTPR 454
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 120/447 (26%), Positives = 194/447 (43%), Gaps = 46/447 (10%)
Query: 70 RTLTELRQKYGDVIWLKFGAINTMVILSAKAATDFFKNHDSTFAERKVTETMR--VHGYD 127
R+ LR+KYGDV + G+ +V+ A + + F+ R + GY
Sbjct: 34 RSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDPIFQGYG 93
Query: 128 KSSLALAPYGAFWRVLRRLVTVEM--------LVTKRINETASV-------RRKCVNDML 172
+ G WR LRR M V +RI E A + + D
Sbjct: 94 ----VIFANGERWRALRRFSLATMRDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNT 149
Query: 173 LWIEQEASGVHVARLVFLSTFNLLGNLMLSRDLLDRESNDGAEFFQAMMGLME-WSGHAN 231
L S + + +VF F+ + L LLD + + E +SG
Sbjct: 150 LLFHSITSNI-ICSIVFGKRFDYKDPVFLR--LLDLFFQSFSLISSFSSQVFELFSG--- 203
Query: 232 LADFFPILRRLDPQGLRRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDV 291
FP G R++ R+ L+ + F+ + +E+ + ++ +DF+DV
Sbjct: 204 FLKHFP--------GTHRQIYRN----LQEINTFIGQSVEKHRATLDPSNP---RDFIDV 248
Query: 292 -MLDFEGNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAE 350
+L E + D ++ ++L + +L +F AG+ETTS+T+ + +L P + + E
Sbjct: 249 YLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKE 308
Query: 351 LAQAVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQ 410
+ Q +G+ R DD +PY AVI E RL IPF VP +DT F+GY IPK+T+
Sbjct: 309 IEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTE 368
Query: 411 VLVNAWAIGRDPEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRML 470
V + DP ++ P +F P FL + K +N +PF G+R+C G +A L
Sbjct: 369 VFPVLSSALHDPRYFETPNTFNPGHFLDANGALK-RNEGFMPFSLGKRICLGEGIARTEL 427
Query: 471 HLILGSLLHQFDWELDC-KEEIDMNDR 496
L ++L F E+ID+ R
Sbjct: 428 FLFFTTILQNFSIASPVPPEDIDLTPR 454
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 186/418 (44%), Gaps = 26/418 (6%)
Query: 72 LTELRQKYGDVIWLKFGAINTMVILSAKAATDFFKNHDSTFAERKVTETMRVHGYDKSSL 131
L L QK G V L+ G +V+ S + + FA R + ++ +
Sbjct: 49 LLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRPQIPSYKLVSQRCQDI 108
Query: 132 ALAPYGAFWRVLRRLVTVEMLVTKRINETASVRRKCVNDMLLWIEQEASGVHVARLVFLS 191
+L Y W+ ++L +L+ R + V + Q + V + + L
Sbjct: 109 SLGDYSLLWKAHKKLTRSALLLGTRSSMEPWVDQLTQEFCERMRVQAGAPVTIQKEFSLL 168
Query: 192 TFNLLGNLMLSRDLLDRESNDGAEFFQAMMGLMEWSGHANLA--DFFPILRRLDPQGLRR 249
T +++ L ++E F + LM+ H ++ D P LR GL R
Sbjct: 169 TCSIICYLTFG----NKEDTLVHAFHDCVQDLMKTWDHWSIQILDMVPFLRFFPNPGLWR 224
Query: 250 KMERDVGKALEIASKFVKERLEQ-KDKNVTGTSDEKRKDFLDVMLDFEGNGKDE--PAKV 306
+ +A+E V+++L + K+ V G + +D D ML G + E P ++
Sbjct: 225 -----LKQAIENRDHMVEKQLRRHKESMVAG----QWRDMTDYMLQGVGRQRVEEGPGQL 275
Query: 307 SEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEE--- 363
E +++ ++++F+ G+ETT+ST+ WA+ LL +PE + + EL + +G +
Sbjct: 276 LEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPGASCSRVTY 335
Query: 364 DDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPE 423
D LP L A I E LRL P +P +P R ++ GY IP+ V+ N D
Sbjct: 336 KDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDET 395
Query: 424 VWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQF 481
VW++P F+P+RFL G N + FG G R+C G LA L ++L LL F
Sbjct: 396 VWEQPHEFRPDRFL-----EPGANPSALAFGCGARVCLGESLARLELFVVLARLLQAF 448
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 113/434 (26%), Positives = 195/434 (44%), Gaps = 29/434 (6%)
Query: 60 NMF--DLGTVPHRTLTELRQKYGDVIWLKFGAINTMVILSAKAATDFFKNHDSTFAERKV 117
N+F +L +P ++ T L Q++G V L G+ +V+ KA + ++ F+ R
Sbjct: 23 NLFQLELKNIP-KSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEALLDYKDEFSGRGD 81
Query: 118 TETMRVHGYDKSSLALAPYGAFWRVLRR--LVTVEMLVTKRINETASVRRKCVNDMLLWI 175
H + + G W+ +RR L T+ + + ++R+ +
Sbjct: 82 LPAFHAH---RDRGIIFNNGPTWKDIRRFSLTTLRNYGMGKQGNESRIQREAHFLLEALR 138
Query: 176 EQEASGVHVARLVFLSTFNLLGNLMLSRDLLDRESNDGAEFFQAMMGLMEWSGHA----- 230
+ + L+ + N++ +++ + + ND E F +M L + H
Sbjct: 139 KTQGQPFDPTFLIGCAPCNVIADILFRKHF---DYND--EKFLRLMYLFNENFHLLSTPW 193
Query: 231 -NLADFFPILRRLDPQGLRRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFL 289
L + FP P G RK+ ++V + E S+ VKE + D N +D
Sbjct: 194 LQLYNNFPSFLHYLP-GSHRKVIKNVAEVKEYVSERVKEHHQSLDPNCP-------RDLT 245
Query: 290 DVMLDFEGNGKDEPAKVSEKD-LNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAK 348
D +L K ++ D + + + ++F AG+ETTS+T+ + L L+ PE K
Sbjct: 246 DCLLVEMEKEKHSAERLYTMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKLH 305
Query: 349 AELAQAVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKD 408
E+ + +G R D +PY+ AV+ E R +P +P A DT F+GY IPK
Sbjct: 306 EEIDRVIGPSRIPAIKDRQEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYLIPKG 365
Query: 409 TQVLVNAWAIGRDPEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHR 468
T V+ ++ D + + +P FKPE FL +K +Y PF G+R+CAG LA
Sbjct: 366 TVVVPTLDSVLYDNQEFPDPEKFKPEHFLNENGKFKYSDY-FKPFSTGKRVCAGEGLARM 424
Query: 469 MLHLILGSLLHQFD 482
L L+L ++L F+
Sbjct: 425 ELFLLLCAILQHFN 438
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 120/473 (25%), Positives = 200/473 (42%), Gaps = 48/473 (10%)
Query: 63 DLGTVPHRTLTELRQKYGDVIWLKFGAINTMVILSAKAATDFFKNHDSTFAERKVTETMR 122
D P+ +LR+++GDV L+ +V+ A + H A+R +
Sbjct: 28 DFQNTPY-CFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQ 86
Query: 123 VHGYDKSS--LALAPYGAFWRVLRRLVTVEMLVTKRINETASVRRKCVNDMLLWIEQEAS 180
+ G+ S + LA YG WR RR + + +K + W+ +EA+
Sbjct: 87 ILGFGPRSQGVFLARYGPAWREQRRFSVSTL-------RNLGLGKKSLEQ---WVTEEAA 136
Query: 181 GV------HVAR------LVFLSTFNLLGNLMLSRDLLDRESNDGAEFFQ----AMMGLM 224
+ H R L+ + N++ +L R R D F + A GL
Sbjct: 137 CLCAAFANHSGRPFRPNGLLDKAVSNVIASLTCGR----RFEYDDPRFLRLLDLAQEGLK 192
Query: 225 EWSGHANLADFFPILRR-LDPQGLRRKMERDVGKALEIASKFVKERLEQ-KDKNVTGTSD 282
E SG LR L+ + R + GK L F+ + E + +T
Sbjct: 193 EESG---------FLREVLNAVPVDRHIPALAGKVLRFQKAFLTQLDELLTEHRMTWDPA 243
Query: 283 EKRKDFLDVMLDFEGNGKDEP-AKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNP 341
+ +D + L K P + ++++L I + ++F AG TTS+T+ W L ++ +P
Sbjct: 244 QPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHP 303
Query: 342 ESLNKAKAELAQAVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQ 401
+ + + E+ +G R E D ++PY AVI E R +P + D Q
Sbjct: 304 DVQRRVQQEIDDVIGQVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGMTHMTSRDIEVQ 363
Query: 402 GYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCA 461
G+ IPK T ++ N ++ +D VW++P+ F PE FL + + + +PF AGRR C
Sbjct: 364 GFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQGHFV-KPEAFLPFSAGRRACL 422
Query: 462 GVPLAHRMLHLILGSLLHQFDWELDCKEEIDMNDRMGITVRKAEP--LIAVPK 512
G PLA L L SLL F + + + + + + P L AVP+
Sbjct: 423 GEPLARMELFLFFTSLLQHFSFSVPTGQPRPSHHGVFAFLVSPSPYELCAVPR 475
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 119/473 (25%), Positives = 199/473 (42%), Gaps = 48/473 (10%)
Query: 63 DLGTVPHRTLTELRQKYGDVIWLKFGAINTMVILSAKAATDFFKNHDSTFAERKVTETMR 122
D P+ +LR+++GDV L+ +V+ A + H A+R +
Sbjct: 28 DFQNTPY-CFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQ 86
Query: 123 VHGYDKSS--LALAPYGAFWRVLRRLVTVEMLVTKRINETASVRRKCVNDMLLWIEQEAS 180
+ G+ S + LA YG WR RR + + +K + W+ +EA+
Sbjct: 87 ILGFGPRSQGVFLARYGPAWREQRRFSVSTL-------RNLGLGKKSLEQ---WVTEEAA 136
Query: 181 GV------HVAR------LVFLSTFNLLGNLMLSRDLLDRESNDGAEFFQ----AMMGLM 224
+ H R L+ + N++ +L R R D F + A GL
Sbjct: 137 CLCAAFANHSGRPFRPNGLLDKAVSNVIASLTCGR----RFEYDDPRFLRLLDLAQEGLK 192
Query: 225 EWSGHA-NLADFFPILRRLDPQGLRRKMERDVGKALEIASKFVKERLEQ-KDKNVTGTSD 282
E SG + + P+L + GK L F+ + E + +T
Sbjct: 193 EESGFLREVLNAVPVLLHIPALA---------GKVLRFQKAFLTQLDELLTEHRMTWDPA 243
Query: 283 EKRKDFLDVMLDFEGNGKDEP-AKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNP 341
+ +D + L K P + ++++L I + ++F AG TTS+T+ W L ++ +P
Sbjct: 244 QPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHP 303
Query: 342 ESLNKAKAELAQAVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQ 401
+ + + E+ +G R E D ++PY AVI E R +P V D Q
Sbjct: 304 DVQRRVQQEIDDVIGQVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQ 363
Query: 402 GYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCA 461
G+ IPK T ++ N ++ +D VW++P+ F PE FL + + + +PF AGRR C
Sbjct: 364 GFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQGHFV-KPEAFLPFSAGRRACL 422
Query: 462 GVPLAHRMLHLILGSLLHQFDWELDCKEEIDMNDRMGITVRKAEP--LIAVPK 512
G PLA L L SLL F + + + + + + P L AVP+
Sbjct: 423 GEPLARMELFLFFTSLLQHFSFSVPTGQPRPSHHGVFAFLVSPSPYELCAVPR 475
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/437 (25%), Positives = 193/437 (44%), Gaps = 30/437 (6%)
Query: 70 RTLTELRQKYGDVIWLKFGAINTMVILSAKAATDFFKNHDSTFAERKVTETMRVHGYDKS 129
++ R+KYGDV + G +++ +A + + F+ R + V + +
Sbjct: 34 KSFLRFREKYGDVFTVHLGPRPVVMLCGVEAIREALVDKAEAFSGRG--KIAMVDPFFRG 91
Query: 130 SLALAPYGAFWRVLRRLVTVEM--------LVTKRINETASVRRKCVNDMLLWIEQEASG 181
+ G W+VLRR M V +RI E A +C+ + L +
Sbjct: 92 YGVIFANGNRWKVLRRFSVTTMRDFGMGKRSVEERIQEEA----QCLIEEL---RKSKGA 144
Query: 182 VHVARLVFLSTFNLLGNLMLSRDLLDRESNDGAEFFQAMMGLMEWSGHANLADFFPILRR 241
+ +F S + N++ S R EF + M+ L + + ++ F L
Sbjct: 145 LMDPTFLFQS---ITANIICSIVFGKRFHYQDQEFLK-MLNLF-YQTFSLISSVFGQLFE 199
Query: 242 LDPQGLRR--KMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDV-MLDFEGN 298
L L+ R V K L+ + ++ +E+ + + ++ +D +D +L E
Sbjct: 200 LFSGFLKHFPGAHRQVYKNLQEINAYIGHSVEKHRETLDPSAP---RDLIDTYLLHMEKE 256
Query: 299 GKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGAD 358
+ ++ S ++LN+ L +F AG+ETTS+T+ + +L P + E+ Q +G
Sbjct: 257 KSNAHSEFSHQNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVIGPH 316
Query: 359 RTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAI 418
R E D +PY +AVI E R +P VP + T+F+GY IPKDT+V +
Sbjct: 317 RPPELHDRAKMPYTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRGYIIPKDTEVFLILSTA 376
Query: 419 GRDPEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLL 478
DP +++P +F P+ FL + K + IPF G+R+C G +A L L ++L
Sbjct: 377 LHDPHYFEKPDAFNPDHFLDANGALK-KTEAFIPFSLGKRICLGEGIARAELFLFFTTIL 435
Query: 479 HQFDWELD-CKEEIDMN 494
F E+ID+
Sbjct: 436 QNFSMASPVAPEDIDLT 452
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 109/434 (25%), Positives = 191/434 (44%), Gaps = 49/434 (11%)
Query: 70 RTLTELRQKYGDVIWLKFGAINTMVILSAKAATDFFKNHDSTFAERKV----TETMRVHG 125
++LT L + YG V L FG +V+ +A + + F+ R + R G
Sbjct: 33 KSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIFPLAERANRGFG 92
Query: 126 YDKSSLALAPYGAFWRVLRRLVTVEM----LVTKRINETASVRRKCVNDMLLWIEQEASG 181
S+ G W+ +RR + + + + I + +C+ + L + +AS
Sbjct: 93 IVFSN------GKKWKEIRRFSLMTLRNFGMGKRSIEDRVQEEARCLVEELR--KTKASP 144
Query: 182 VHVARLVFLSTFNLLGNLMLSRDLLDRESNDGAEFFQAMMGLME------------WSGH 229
++ + N++ +++ + R +F M L E ++
Sbjct: 145 CDPTFILGCAPCNVICSIIFHK----RFDYKDQQFLNLMEKLNENIEILSSPWIQVYNNF 200
Query: 230 ANLADFFPILRRLDPQGLRRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFL 289
L D+FP G K+ ++V + VKE E D N +DF+
Sbjct: 201 PALLDYFP--------GTHNKLLKNVAFMKSYILEKVKEHQESMDMN-------NPQDFI 245
Query: 290 DVML-DFEGNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAK 348
D L E ++P++ + + L +++F AG+ETTS+T+ +AL LL +PE K +
Sbjct: 246 DCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQ 305
Query: 349 AELAQAVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKD 408
E+ + +G +R+ D ++PY AV+ E R +P +P D F+ Y IPK
Sbjct: 306 EEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKG 365
Query: 409 TQVLVNAWAIGRDPEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHR 468
T +L++ ++ D + + P F P FL ++K Y +PF AG+R+C G LA
Sbjct: 366 TTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSKY-FMPFSAGKRICVGEALAGM 424
Query: 469 MLHLILGSLLHQFD 482
L L L S+L F+
Sbjct: 425 ELFLFLTSILQNFN 438
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/426 (24%), Positives = 193/426 (45%), Gaps = 29/426 (6%)
Query: 70 RTLTELRQKYGDVIWLKFGAINTMVILSAKAATDFFKNHDSTFAERKV----TETMRVHG 125
++LT L + YG V L FG +V+ +A + + F+ R + R G
Sbjct: 35 KSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIFPLAERANRGFG 94
Query: 126 YDKSSLALAPYGAFWRVLRRLVTVEM----LVTKRINETASVRRKCVNDMLLWIEQEASG 181
S+ G W+ +RR + + + + I + +C+ + L + +AS
Sbjct: 95 IVFSN------GKKWKEIRRFSLMTLRNFGMGKRSIEDRVQEEARCLVEELR--KTKASP 146
Query: 182 VHVARLVFLSTFNLLGNLMLSR--DLLDRESNDGAEFFQAMMGLMEWSGHANLADFFPIL 239
++ + N++ +++ + D D++ + E + ++ +F PI+
Sbjct: 147 CDPTFILGCAPCNVICSIIFHKRFDYKDQQFLNLMEKLNENIKILSSPWIQICNNFSPII 206
Query: 240 RRLDPQGLRRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDVML-DFEGN 298
G K+ ++V + VKE E D N +DF+D L E
Sbjct: 207 DYF--PGTHNKLLKNVAFMKSYILEKVKEHQESMDMN-------NPQDFIDCFLMKMEKE 257
Query: 299 GKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGAD 358
++P++ + + L +++F AG+ETTS+T+ +AL LL +PE K + E+ + +G +
Sbjct: 258 KHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRN 317
Query: 359 RTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAI 418
R+ D ++PY AV+ E R +P +P D F+ Y IPK T +L++ ++
Sbjct: 318 RSPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSV 377
Query: 419 GRDPEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLL 478
D + + P F P FL ++K Y +PF AG+R+C G LA L L L S+L
Sbjct: 378 LHDNKEFPNPEMFDPHHFLDEGGNFKKSKY-FMPFSAGKRICVGEALAGMELFLFLTSIL 436
Query: 479 HQFDWE 484
F+ +
Sbjct: 437 QNFNLK 442
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 96/428 (22%), Positives = 188/428 (43%), Gaps = 37/428 (8%)
Query: 69 HRTLTELRQKYGDVIWLKFGAINTMVILSAKAATDFFKNHDSTFAERKVTETMR--VHGY 126
+ +L ++ ++YG V + G +V+ A + + F+ R T GY
Sbjct: 33 YNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDWVFKGY 92
Query: 127 DKSSLALAPYGAFWRVLRRLVTVEML--------VTKRINETASVRRKCVNDMLLWIEQE 178
+ G + LRR + + +RI E A L+ +
Sbjct: 93 G----VVFSNGERAKQLRRFSIATLRDFGVGKRGIEERIQEEAG--------FLIDALRG 140
Query: 179 ASGVHVARLVFLS--TFNLLGNLMLSRDLLDRESNDGAEFFQAMMGLMEWSGHA--NLAD 234
G ++ FLS N++ +++ D D + + + M+G+ +++ + L +
Sbjct: 141 TGGANIDPTFFLSRTVSNVISSIVFG-DRFDYKDKEFLSLLRMMLGIFQFTSTSTGQLYE 199
Query: 235 FFPILRRLDPQGLRRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLD-VML 293
F + + P ++ + L+ F+ +++E + + S +DF+D ++
Sbjct: 200 MFSSVMKHLP-----GPQQQAFQCLQGLEDFIAKKVEHNQRTLDPNSP---RDFIDSFLI 251
Query: 294 DFEGNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQ 353
+ K+ + K+L + L++F+ G+ET S+T+ + L+ +PE K E+ +
Sbjct: 252 RMQEEEKNPNTEFYLKNLVMTTLQLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDR 311
Query: 354 AVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLV 413
+G +R + +D +PY++AVI E R IP + RR +DT F+ + +PK T+V
Sbjct: 312 VIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYP 371
Query: 414 NAWAIGRDPEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLI 473
++ RDP + P F P+ FL +K + +PF G+R C G LA L L
Sbjct: 372 MLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSD-AFVPFSIGKRNCFGEGLARMELFLF 430
Query: 474 LGSLLHQF 481
+++ F
Sbjct: 431 FTTVMQNF 438
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 96/428 (22%), Positives = 188/428 (43%), Gaps = 37/428 (8%)
Query: 69 HRTLTELRQKYGDVIWLKFGAINTMVILSAKAATDFFKNHDSTFAERKVTETMR--VHGY 126
+ +L ++ ++YG V + G +V+ A + + F+ R T GY
Sbjct: 33 YNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDWVFKGY 92
Query: 127 DKSSLALAPYGAFWRVLRRLVTVEML--------VTKRINETASVRRKCVNDMLLWIEQE 178
+ G + LRR + + +RI E A L+ +
Sbjct: 93 G----VVFSNGERAKQLRRFSIATLRDFGVGKRGIEERIQEEAG--------FLIDALRG 140
Query: 179 ASGVHVARLVFLS--TFNLLGNLMLSRDLLDRESNDGAEFFQAMMGLMEWSGHA--NLAD 234
G ++ FLS N++ +++ D D + + + M+G+ +++ + L +
Sbjct: 141 TGGANIDPTFFLSRTVSNVISSIVFG-DRFDYKDKEFLSLLRMMLGIFQFTSTSTGQLYE 199
Query: 235 FFPILRRLDPQGLRRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLD-VML 293
F + + P ++ + L+ F+ +++E + + S +DF+D ++
Sbjct: 200 MFSSVMKHLP-----GPQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSP---RDFIDSFLI 251
Query: 294 DFEGNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQ 353
+ K+ + K+L + L++F+ G+ET S+T+ + L+ +PE K E+ +
Sbjct: 252 RMQEEEKNPNTEFYLKNLVMTTLQLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDR 311
Query: 354 AVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLV 413
+G +R + +D +PY++AVI E R IP + RR +DT F+ + +PK T+V
Sbjct: 312 VIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYP 371
Query: 414 NAWAIGRDPEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLI 473
++ RDP + P F P+ FL +K + +PF G+R C G LA L L
Sbjct: 372 MLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSD-AFVPFSIGKRNCFGEGLARMELFLF 430
Query: 474 LGSLLHQF 481
+++ F
Sbjct: 431 FTTVMQNF 438
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 96/428 (22%), Positives = 188/428 (43%), Gaps = 37/428 (8%)
Query: 69 HRTLTELRQKYGDVIWLKFGAINTMVILSAKAATDFFKNHDSTFAERKVTETMR--VHGY 126
+ +L ++ ++YG V + G +V+ A + + F+ R T GY
Sbjct: 33 YNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDWVFKGY 92
Query: 127 DKSSLALAPYGAFWRVLRRLVTVEML--------VTKRINETASVRRKCVNDMLLWIEQE 178
+ G + LRR + + +RI E A L+ +
Sbjct: 93 G----VVFSNGERAKQLRRFSIATLRDFGVGKRGIEERIQEEAG--------FLIDALRG 140
Query: 179 ASGVHVARLVFLS--TFNLLGNLMLSRDLLDRESNDGAEFFQAMMGLMEWSGHA--NLAD 234
G ++ FLS N++ +++ D D + + + M+G+ +++ + L +
Sbjct: 141 TGGANIDPTFFLSRTVSNVISSIVFG-DRFDYKDKEFLSLLRMMLGIFQFTSTSTGQLYE 199
Query: 235 FFPILRRLDPQGLRRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLD-VML 293
F + + P ++ + L+ F+ +++E + + S +DF+D ++
Sbjct: 200 MFSSVMKHLPGPQQQAFQ-----LLQGLEDFIAKKVEHNQRTLDPNSP---RDFIDSFLI 251
Query: 294 DFEGNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQ 353
+ K+ + K+L + L++F+ G+ET S+T+ + L+ +PE K E+ +
Sbjct: 252 RMQEEEKNPNTEFYLKNLVMTTLQLFVGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDR 311
Query: 354 AVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLV 413
+G +R + +D +PY++AVI E R IP + RR +DT F+ + +PK T+V
Sbjct: 312 VIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYP 371
Query: 414 NAWAIGRDPEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLI 473
++ RDP + P F P+ FL +K + +PF G+R C G LA L L
Sbjct: 372 MLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSD-AFVPFSIGKRNCFGEGLARMELFLF 430
Query: 474 LGSLLHQF 481
+++ F
Sbjct: 431 FTTVMQNF 438
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/428 (22%), Positives = 187/428 (43%), Gaps = 37/428 (8%)
Query: 69 HRTLTELRQKYGDVIWLKFGAINTMVILSAKAATDFFKNHDSTFAERKVTETMR--VHGY 126
+ +L ++ ++YG V + G +V+ A + + F+ R T GY
Sbjct: 33 YNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDWVFKGY 92
Query: 127 DKSSLALAPYGAFWRVLRRLVTVEML--------VTKRINETASVRRKCVNDMLLWIEQE 178
+ G + LRR + + +RI E A L+ +
Sbjct: 93 G----VVFSNGERAKQLRRFSIATLRDFGVGKRGIEERIQEEAG--------FLIDALRG 140
Query: 179 ASGVHVARLVFLS--TFNLLGNLMLSRDLLDRESNDGAEFFQAMMGLMEWSGHA--NLAD 234
G ++ FLS N++ +++ D D + + + M+G+ +++ + L +
Sbjct: 141 TGGANIDPTFFLSRTVSNVISSIVFG-DRFDYKDKEFLSLLRMMLGIFQFTSTSTGQLYE 199
Query: 235 FFPILRRLDPQGLRRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLD-VML 293
F + + P ++ + L+ F+ +++E + + S +DF+D ++
Sbjct: 200 MFSSVMKHLP-----GPQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSP---RDFIDSFLI 251
Query: 294 DFEGNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQ 353
+ K+ + K+L + L +F+ G+ET S+T+ + L+ +PE K E+ +
Sbjct: 252 RMQEEEKNPNTEFYLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDR 311
Query: 354 AVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLV 413
+G +R + +D +PY++AVI E R IP + RR +DT F+ + +PK T+V
Sbjct: 312 VIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYP 371
Query: 414 NAWAIGRDPEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLI 473
++ RDP + P F P+ FL +K + +PF G+R C G LA L L
Sbjct: 372 MLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSD-AFVPFSIGKRNCFGEGLARMELFLF 430
Query: 474 LGSLLHQF 481
+++ F
Sbjct: 431 FTTVMQNF 438
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/428 (22%), Positives = 186/428 (43%), Gaps = 37/428 (8%)
Query: 69 HRTLTELRQKYGDVIWLKFGAINTMVILSAKAATDFFKNHDSTFAERKVTETMR--VHGY 126
+ +L ++ ++YG V + G +V+ A + + F+ R T GY
Sbjct: 33 YNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDWVFKGY 92
Query: 127 DKSSLALAPYGAFWRVLRRLVTVEML--------VTKRINETASVRRKCVNDMLLWIEQE 178
+ G + LRR + + +RI E A L+ +
Sbjct: 93 G----VVFSNGERAKQLRRFSIATLRDFGVGKRGIEERIQEEAG--------FLIDALRG 140
Query: 179 ASGVHVARLVFLS--TFNLLGNLMLSRDLLDRESNDGAEFFQAMMGLMEWSGHA--NLAD 234
G ++ FLS N++ +++ D D + + + M+G +++ + L +
Sbjct: 141 TGGANIDPTFFLSRTVSNVISSIVFG-DRFDYKDKEFLSLLRMMLGSFQFTSTSTGQLYE 199
Query: 235 FFPILRRLDPQGLRRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLD-VML 293
F + + P ++ + L+ F+ +++E + + S +DF+D ++
Sbjct: 200 MFSSVMKHLP-----GPQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSP---RDFIDSFLI 251
Query: 294 DFEGNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQ 353
+ K+ + K+L + L +F AG+ET S+T+ + L+ +PE K E+ +
Sbjct: 252 RMQEEEKNPNTEFYLKNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDR 311
Query: 354 AVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLV 413
+G +R + +D +PY++AVI E R IP + RR +DT F+ + +PK T+V
Sbjct: 312 VIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMGLARRVKKDTKFRDFFLPKGTEVYP 371
Query: 414 NAWAIGRDPEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLI 473
++ RDP + P F P+ FL +K + +PF G+R C G LA L L
Sbjct: 372 MLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSD-AFVPFSIGKRNCFGEGLARMELFLF 430
Query: 474 LGSLLHQF 481
+++ F
Sbjct: 431 FTTVMQNF 438
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 100/444 (22%), Positives = 195/444 (43%), Gaps = 38/444 (8%)
Query: 69 HRTLTELRQKYGDVIWLKFGAINTMVILSAKAATDFFKNHDSTFAERKVTETMR--VHGY 126
+ +L ++ ++YG V + G +V+ A + + F+ R T GY
Sbjct: 33 YNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVKEALVDQAEEFSGRGEQATFDWLFKGY 92
Query: 127 DKSSLALAPYGAFWRVLRRLVTVEML--------VTKRINETASVRRKCVNDMLLWIEQE 178
+A + G + LRR + + +RI E A L+ +
Sbjct: 93 ---GVAFS-NGERAKQLRRFSIATLRGFGVGKRGIEERIQEEAG--------FLIDALRG 140
Query: 179 ASGVHVARLVFLS--TFNLLGNLMLSRDLLDRESNDGAEFFQAMMGLMEWSGHA--NLAD 234
G ++ FLS N++ +++ D D E + + M+G +++ + L +
Sbjct: 141 THGANIDPTFFLSRTVSNVISSIVFG-DRFDYEDKEFLSLLRMMLGSFQFTATSTGQLYE 199
Query: 235 FFPILRRLDPQGLRRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLD-VML 293
F + + P ++ K L+ F+ +++E + + S +DF+D ++
Sbjct: 200 MFSSVMKHLP-----GPQQQAFKELQGLEDFIAKKVEHNQRTLDPNSP---RDFIDSFLI 251
Query: 294 DFEGNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQ 353
+ K+ + K+L + L +F AG+ET S+T+ + L+ +PE K E+ +
Sbjct: 252 RMQEEEKNPNTEFYLKNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDR 311
Query: 354 AVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLV 413
+G +R + +D +PY +AVI E R +P + R +DT F+ + +PK T+V
Sbjct: 312 VIGKNRQPKFEDRAKMPYTEAVIHEIQRFGDMLPMGLAHRVNKDTKFRDFFLPKGTEVFP 371
Query: 414 NAWAIGRDPEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLI 473
++ RDP + P F P+ FL +K + +PF G+R C G LA L L
Sbjct: 372 MLGSVLRDPRFFSNPRDFNPQHFLDKKGQFKKSD-AFVPFSIGKRYCFGEGLARMELFLF 430
Query: 474 LGSLLHQFDWEL-DCKEEIDMNDR 496
+++ F ++ ++ID++ +
Sbjct: 431 FTTIMQNFRFKSPQSPKDIDVSPK 454
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 103/426 (24%), Positives = 189/426 (44%), Gaps = 29/426 (6%)
Query: 70 RTLTELRQKYGDVIWLKFGAINTMVILSAKAATDFFKNHDSTFAERKVTE-TMRVHGYDK 128
++ T + YG V + FG +V +A + ++ F+ R + + R+ K
Sbjct: 34 KSFTNFSKVYGPVFTVYFGMNPIVVFHGYEAVKEALIDNGEEFSGRGNSPISQRI---TK 90
Query: 129 SSLALAPYGAFWRVLRRLVTVEM----LVTKRINETASVRRKCVNDMLLWIEQEASGVHV 184
++ G W+ +RR + + + I + C+ + L + +AS
Sbjct: 91 GLGIISSNGKRWKEIRRFSLTTLRNFGMGKRSIEDRVQEEAHCLVEELR--KTKASPCDP 148
Query: 185 ARLVFLSTFNLLGNLMLSRDLLDRESNDGAEFFQAMMGLMEW-----SGHANLADFFPIL 239
++ + N++ +++ + ++ N F M E S + + FP+L
Sbjct: 149 TFILGCAPCNVICSVVFQKRFDYKDQN----FLTLMKRFNENFRILNSPWIQVCNNFPLL 204
Query: 240 RRLDPQGLRRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDVML-DFEGN 298
P G K+ ++V + VKE D N +DF+D L E
Sbjct: 205 IDCFP-GTHNKVLKNVALTRSYIREKVKEHQASLDVN-------NPRDFIDCFLIKMEQE 256
Query: 299 GKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGAD 358
++ ++ + ++L + ++F+AG+ETTS+T+ + L LL +PE K + E+ +G
Sbjct: 257 KDNQKSEFNIENLVGTVADLFVAGTETTSTTLRYGLLLLLKHPEVTAKVQEEIDHVIGRH 316
Query: 359 RTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAI 418
R+ D ++PY AV+ E R +P VP DT F+ Y IPK T ++ ++
Sbjct: 317 RSPCMQDRSHMPYTDAVVHEIQRYSDLVPTGVPHAVTTDTKFRNYLIPKGTTIMALLTSV 376
Query: 419 GRDPEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLL 478
D + + P F P FL ++K +Y +PF AG+R+CAG LA L L L ++L
Sbjct: 377 LHDDKEFPNPNIFDPGHFLDKNGNFKKSDY-FMPFSAGKRICAGEGLARMELFLFLTTIL 435
Query: 479 HQFDWE 484
F+ +
Sbjct: 436 QNFNLK 441
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 131/261 (50%), Gaps = 18/261 (6%)
Query: 253 RDVGKALEIASKFVKE-RLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVSEKDL 311
R+V L + K +KE RLE K+ R DFL +M+D + N K+ + + DL
Sbjct: 221 REVTNFLRKSVKRMKESRLEDTQKH--------RVDFLQLMIDSQ-NSKETESHKALSDL 271
Query: 312 NIF---ILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDDIDN 368
+ I+ IF AG ETTSS + + + EL T+P+ K + E+ + D +
Sbjct: 272 ELVAQSIIFIF-AGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQ 330
Query: 369 LPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEP 428
+ YL V+ ETLRL P I + R +D G IPK V++ ++A+ RDP+ W EP
Sbjct: 331 MEYLDMVVNETLRLFP-IAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEP 389
Query: 429 WSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDWELDCK 488
F PERF D Y PFG+G R C G+ A + L L +L F ++ CK
Sbjct: 390 EKFLPERFSKKNKD-NIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFK-PCK 447
Query: 489 E-EIDMNDRMGITVRKAEPLI 508
E +I + +G ++ +P++
Sbjct: 448 ETQIPLKLSLGGLLQPEKPVV 468
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 131/261 (50%), Gaps = 18/261 (6%)
Query: 253 RDVGKALEIASKFVKE-RLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVSEKDL 311
R+V L + K +KE RLE K+ R DFL +M+D + N K+ + + DL
Sbjct: 222 REVTNFLRKSVKRMKESRLEDTQKH--------RVDFLQLMIDSQ-NSKETESHKALSDL 272
Query: 312 NIF---ILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDDIDN 368
+ I+ IF AG ETTSS + + + EL T+P+ K + E+ + D +
Sbjct: 273 ELVAQSIIFIF-AGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQ 331
Query: 369 LPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEP 428
+ YL V+ ETLRL P I + R +D G IPK V++ ++A+ RDP+ W EP
Sbjct: 332 MEYLDMVVNETLRLFP-IAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEP 390
Query: 429 WSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDWELDCK 488
F PERF D Y PFG+G R C G+ A + L L +L F ++ CK
Sbjct: 391 EKFLPERFSKKNKD-NIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFK-PCK 448
Query: 489 E-EIDMNDRMGITVRKAEPLI 508
E +I + +G ++ +P++
Sbjct: 449 ETQIPLKLSLGGLLQPEKPVV 469
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 131/261 (50%), Gaps = 18/261 (6%)
Query: 253 RDVGKALEIASKFVKE-RLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVSEKDL 311
R+V L + K +KE RLE K+ R DFL +M+D + N K+ + + DL
Sbjct: 223 REVTNFLRKSVKRMKESRLEDTQKH--------RVDFLQLMIDSQ-NSKETESHKALSDL 273
Query: 312 NIF---ILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDDIDN 368
+ I+ IF AG ETTSS + + + EL T+P+ K + E+ + D +
Sbjct: 274 ELVAQSIIFIF-AGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQ 332
Query: 369 LPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEP 428
+ YL V+ ETLRL P I + R +D G IPK V++ ++A+ RDP+ W EP
Sbjct: 333 MEYLDMVVNETLRLFP-IAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEP 391
Query: 429 WSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDWELDCK 488
F PERF D Y PFG+G R C G+ A + L L +L F ++ CK
Sbjct: 392 EKFLPERFSKKNKD-NIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFK-PCK 449
Query: 489 E-EIDMNDRMGITVRKAEPLI 508
E +I + +G ++ +P++
Sbjct: 450 ETQIPLKLSLGGLLQPEKPVV 470
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 114/461 (24%), Positives = 213/461 (46%), Gaps = 45/461 (9%)
Query: 69 HRTLTELRQKYGDVIWLKFGAINTMVILSAKAATDFFKNHDSTFAER---KVTETMRVHG 125
H TL E +KYG + +K G+ ++ V L + + + +S +R K + R H
Sbjct: 51 HDTLAEYHKKYGQIFRMKLGSFDS-VHLGSPSLLEALYRTESAHPQRLEIKPWKAYRDHR 109
Query: 126 YDKSSLALAP-------YGAFWRVLRRLVTVEMLVTKRINETASVRRKCVNDMLLWIEQE 178
+ L + AF + L + V + M + K+INE + + ++++ ++
Sbjct: 110 NEAYGLMILEGQEWQRVRSAFQKKLMKPVEI-MKLDKKINEVLADFLERMDEL---CDER 165
Query: 179 ASGVHVARLVFLSTFNLLGNLMLSR--DLLDRESNDGA-EFFQAMMGLMEWSGHANLADF 235
+ + +F + ++ + LL +E+ + A F A+ +M G +
Sbjct: 166 GRIPDLYSELNKWSFESICLVLYEKRFGLLQKETEEEALTFITAIKTMMSTFGKMMVT-- 223
Query: 236 FPILRRLDPQGLRRKMERDVGKALEIASKFVKERLEQK-DKNVTGTSDEKRKDFL-DVML 293
P L +++ V +A +A + + ++ D + S + DFL D+
Sbjct: 224 --------PVELHKRLNTKVWQAHTLAWDTIFKSVKPCIDNRLQRYSQQPGADFLCDIY- 274
Query: 294 DFEGNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQ 353
+ +S+K+L + E+ LA ETT++++ W L L NP++ + E+
Sbjct: 275 --------QQDHLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQS 326
Query: 354 AVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQG-YHIPKDTQVL 412
+ ++T +D+ N+PYLKA +KE++RL P +PF R ++ G Y +PK T +
Sbjct: 327 VLPDNQTPRAEDLRNMPYLKACLKESMRLTPSVPFTT--RTLDKPTVLGEYALPKGTVLT 384
Query: 413 VNAWAIGRDPEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHL 472
+N +G + +++ F+PER+L + K + +PFG G+RMC G LA LHL
Sbjct: 385 LNTQVLGSSEDNFEDSHKFRPERWLQK--EKKINPFAHLPFGIGKRMCIGRRLAELQLHL 442
Query: 473 ILGSLLHQFDWELDCKEEIDMNDRMGITVRKAEPLIAVPKR 513
L ++ ++D E ++M +GI V E IA R
Sbjct: 443 ALCWIIQKYDIVATDNEPVEML-HLGILVPSRELPIAFRPR 482
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 109/436 (25%), Positives = 189/436 (43%), Gaps = 49/436 (11%)
Query: 70 RTLTELRQKYGDVIWLKFGAINTMVILSAKAATDFFKNHDSTFAERK----VTETMRVHG 125
++LT L + YG V L FG +V+ + + + F+ R R G
Sbjct: 35 KSLTNLSKIYGPVFTLYFGLERMVVLHGYEVVKEALIDLGEEFSGRGHFPLAERANRGFG 94
Query: 126 YDKSSLALAPYGAFWRVLRRLVTVEM----LVTKRINETASVRRKCVNDMLLWIEQEASG 181
S+ G W+ +RR + + + + I + +C+ + L + +AS
Sbjct: 95 IVFSN------GKRWKEIRRFSLMTLRNFGMGKRSIEDRVQEEARCLVEELR--KTKASP 146
Query: 182 VHVARLVFLSTFNLLGNLMLSRDLLDRESNDGAEFFQAMMGLME--------WSGHAN-- 231
++ + N++ +++ + R +F M L E W N
Sbjct: 147 CDPTFILGCAPCNVICSIIFQK----RFDYKDQQFLNLMEKLNENIRIVSTPWIQICNNF 202
Query: 232 --LADFFPILRRLDPQGLRRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFL 289
+ D+FP G K+ +++ + VKE E D N +DF+
Sbjct: 203 PTIIDYFP--------GTHNKLLKNLAFMESDILEKVKEHQESMDIN-------NPRDFI 247
Query: 290 DVML-DFEGNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAK 348
D L E +++ ++ + ++L I ++ AG+ETTS+T+ +AL LL +PE K +
Sbjct: 248 DCFLIKMEKEKQNQQSEFTIENLVITAADLLGAGTETTSTTLRYALLLLLKHPEVTAKVQ 307
Query: 349 AELAQAVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKD 408
E+ + VG +R+ D ++PY AV+ E R IP +P D F+ Y IPK
Sbjct: 308 EEIERVVGRNRSPCMQDRGHMPYTDAVVHEVQRYIDLIPTSLPHAVTCDVKFRNYLIPKG 367
Query: 409 TQVLVNAWAIGRDPEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHR 468
T +L + ++ D + + P F P FL ++K NY +PF AG+R+C G LA
Sbjct: 368 TTILTSLTSVLHDNKEFPNPEMFDPRHFLDEGGNFKKSNY-FMPFSAGKRICVGEGLARM 426
Query: 469 MLHLILGSLLHQFDWE 484
L L L +L F+ +
Sbjct: 427 ELFLFLTFILQNFNLK 442
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 110/441 (24%), Positives = 191/441 (43%), Gaps = 62/441 (14%)
Query: 70 RTLTELRQKYGDVIWLKFGAINTMVILSAKAATDFFKNHDSTFAERKVTETMRVHGYDKS 129
++LT+ + YG V + G T+V+ +A + + FA R + +K
Sbjct: 34 KSLTKFSECYGPVFTVYLGMKPTVVLHGYEAVKEALVDLGEEFAGRGSVPIL-----EKV 88
Query: 130 SLALA---PYGAFWRVLRR--LVTVEML------VTKRINETASVRRKCVNDMLLWIEQE 178
S L W+ +RR L+T+ + RI E A +C+ + L +
Sbjct: 89 SKGLGIAFSNAKTWKEMRRFSLMTLRNFGMGKRSIEDRIQEEA----RCLVEELR--KTN 142
Query: 179 ASGVHVARLVFLSTFNLLGNLMLSRDLLDRESNDGAEFFQAMMGLME------------W 226
AS ++ + N++ +++ +R EF + M L E +
Sbjct: 143 ASPCDPTFILGCAPCNVICSVIFH----NRFDYKDEEFLKLMESLHENVELLGTPWLQVY 198
Query: 227 SGHANLADFFPILRRLDPQGLRRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRK 286
+ L D+FP G+ + + ++ + VKE + D N +
Sbjct: 199 NNFPALLDYFP--------GIHKTLLKNADYIKNFIMEKVKEHQKLLDVN-------NPR 243
Query: 287 DFLDVML---DFEGNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPES 343
DF+D L + E N + + + L I + ++F AG+ETTS+T+ ++L LL +PE
Sbjct: 244 DFIDCFLIKMEQENN-----LEFTLESLVIAVSDLFGAGTETTSTTLRYSLLLLLKHPEV 298
Query: 344 LNKAKAELAQAVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGY 403
+ + E+ + +G R+ D +PY AVI E R +P +P D F+ Y
Sbjct: 299 AARVQEEIERVIGRHRSPCMQDRSRMPYTDAVIHEIQRFIDLLPTNLPHAVTRDVRFRNY 358
Query: 404 HIPKDTQVLVNAWAIGRDPEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGV 463
IPK T ++ + ++ D + + P F P FL + ++K +Y +PF AG+RMC G
Sbjct: 359 FIPKGTDIITSLTSVLHDEKAFPNPKVFDPGHFLDESGNFKKSDY-FMPFSAGKRMCVGE 417
Query: 464 PLAHRMLHLILGSLLHQFDWE 484
LA L L L S+L F +
Sbjct: 418 GLARMELFLFLTSILQNFKLQ 438
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 120/231 (51%), Gaps = 12/231 (5%)
Query: 280 TSDEKRKDFLDVMLDFEGNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLT 339
S +K D L +L+ + + D + E++++ ++ I GSET +STI W L L
Sbjct: 236 ASGQKPDDLLTALLEAKDDNGD---PIGEQEIHDQVVAILTPGSETIASTIMWLLQALAD 292
Query: 340 NPESLNKAKAELAQAVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTN 399
+PE ++ + E+ +AV R +D+ L + VI E +RL P + +++ RRA+ ++
Sbjct: 293 HPEHADRIRDEV-EAVTGGRPVAFEDVRKLRHTGNVIVEAMRLRPAV-WVLTRRAVAESE 350
Query: 400 FQGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRM 459
GY IP ++ + +AI RDP+ +D+ F P+R+L Y + PF AG+R
Sbjct: 351 LGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRWLPERA-ANVPKYAMKPFSAGKRK 409
Query: 460 CAGVPLAHRMLHLILGSLLHQFDWELDCKEEIDMND--RMGITVRKAEPLI 508
C + L LI +L ++ +E + ND R+GIT+R + L+
Sbjct: 410 CPSDHFSMAQLTLITAALATKYRFE----QVAGSNDAVRVGITLRPHDLLV 456
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 107/226 (47%), Gaps = 3/226 (1%)
Query: 281 SDEKRKDFLDVMLDFEGNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTN 340
+D+ +D LDV++ + + S ++ + + AG T+S T W L EL+ +
Sbjct: 218 TDKSDRDMLDVLIAVKAETGT--PRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRH 275
Query: 341 PESLNKAKAELAQAVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNF 400
++ EL + G R+ + +P L+ V+KETLRLHPP+ L+ R A +
Sbjct: 276 RDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILM-RVAKGEFEV 334
Query: 401 QGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMC 460
QG+ I + V + R PE + +P F P R+ + + IPFGAGR C
Sbjct: 335 QGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRC 394
Query: 461 AGVPLAHRMLHLILGSLLHQFDWELDCKEEIDMNDRMGITVRKAEP 506
G A + I LL ++++E+ E ND + V+ A+P
Sbjct: 395 VGAAFAIMQIKAIFSVLLREYEFEMAQPPESYRNDHSKMVVQLAQP 440
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 107/226 (47%), Gaps = 3/226 (1%)
Query: 281 SDEKRKDFLDVMLDFEGNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTN 340
+D+ +D LDV++ + + S ++ + + AG T+S T W L EL+ +
Sbjct: 218 TDKSDRDMLDVLIAVKAETGT--PRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRH 275
Query: 341 PESLNKAKAELAQAVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNF 400
++ EL + G R+ + +P L+ V+KETLRLHPP+ L+ R A +
Sbjct: 276 RDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILM-RVAKGEFEV 334
Query: 401 QGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMC 460
QG+ I + V + R PE + +P F P R+ + + IPFGAGR C
Sbjct: 335 QGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRC 394
Query: 461 AGVPLAHRMLHLILGSLLHQFDWELDCKEEIDMNDRMGITVRKAEP 506
G A + I LL ++++E+ E ND + V+ A+P
Sbjct: 395 VGAAFAIMQIKAIFSVLLREYEFEMAQPPESYRNDHSKMVVQLAQP 440
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 107/226 (47%), Gaps = 3/226 (1%)
Query: 281 SDEKRKDFLDVMLDFEGNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTN 340
+D+ +D LDV++ + + S ++ + + AG T+S T W L EL+ +
Sbjct: 218 TDKSDRDMLDVLIAVKAETGT--PRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRH 275
Query: 341 PESLNKAKAELAQAVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNF 400
++ EL + G R+ + +P L+ V+KETLRLHPP+ L+ R A +
Sbjct: 276 RDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILM-RVAKGEFEV 334
Query: 401 QGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMC 460
QG+ I + V + R PE + +P F P R+ + + IPFGAGR C
Sbjct: 335 QGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRC 394
Query: 461 AGVPLAHRMLHLILGSLLHQFDWELDCKEEIDMNDRMGITVRKAEP 506
G A + I LL ++++E+ E ND + V+ A+P
Sbjct: 395 VGAAFAIMQIKAIFSVLLREYEFEMAQPPESYRNDHSKMVVQLAQP 440
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 108/226 (47%), Gaps = 3/226 (1%)
Query: 281 SDEKRKDFLDVMLDFEGNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTN 340
+D+ +D LDV++ + + + S ++ + + AG T+S T W L EL+ +
Sbjct: 218 TDKSDRDMLDVLIAVKA--ETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRH 275
Query: 341 PESLNKAKAELAQAVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNF 400
++ EL + G R+ + +P L+ V+KETLRLHPP+ L+ R A +
Sbjct: 276 RDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILM-RVAKGEFEV 334
Query: 401 QGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMC 460
QG+ I + V + R PE + +P F P R+ + + IPFGAGR C
Sbjct: 335 QGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRC 394
Query: 461 AGVPLAHRMLHLILGSLLHQFDWELDCKEEIDMNDRMGITVRKAEP 506
G A + I LL ++++E+ E ND + V+ A+P
Sbjct: 395 VGAAFAIMQIKAIFSVLLREYEFEMAQPPESYRNDHSKMVVQLAQP 440
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 133/263 (50%), Gaps = 13/263 (4%)
Query: 248 RRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVS 307
+RK R+V +++ + ++ + Q+ + +E D L +L E +D+
Sbjct: 188 KRKQLREVRESIRFLRQVGRDWV-QRRREALKRGEEVPADILTQILKAEEGAQDD----- 241
Query: 308 EKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDDID 367
E L+ F+ F+AG ET+++ + + + EL PE + + +AE+ + +G+ R + +D+
Sbjct: 242 EGLLDNFV-TFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFEDLG 300
Query: 368 NLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDE 427
L YL V+KE+LRL+PP + R E+T G +P +T +L + + +GR +++
Sbjct: 301 RLQYLSQVLKESLRLYPPA-WGTFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFED 359
Query: 428 PWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDWELDC 487
P +F P+RF + + PF G R C G A + +++ LL + ++ L
Sbjct: 360 PLTFNPDRFGPGAPKPR---FTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRLEFRLVP 416
Query: 488 KEEIDMNDRMGITVRKAEPLIAV 510
+ + ++ T++ +P++
Sbjct: 417 GQRFGLQEQ--ATLKPLDPVLCT 437
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 118/439 (26%), Positives = 180/439 (41%), Gaps = 51/439 (11%)
Query: 77 QKYGDVIWLKFGAINTMVILSAKAATDFFKNHDSTFAERKVTETMRVHGYDKSSLA-LAP 135
QKYG + K G + ++ I+ + FK S + + H Y + + L
Sbjct: 45 QKYGPIYREKLGNLESVYIIHPEDVAHLFKFEGSYPERYDIPPWLAYHRYYQKPIGVLFK 104
Query: 136 YGAFWRVLRRLVTVEMLVTKRINETASVRRKCVNDMLLW----IEQEASGVHVARL---V 188
W+ R ++ E++ + I + D + I+Q+ SG V + +
Sbjct: 105 KSGTWKKDRVVLNTEVMAPEAIKNFIPLLNPVSQDFVSLLHKRIKQQGSGKFVGDIKEDL 164
Query: 189 FLSTFNLLGNLMLSRDL--LDRESNDGAE-FFQAMMGLMEWSGHANLADFFPILRRLDPQ 245
F F + N+M L L+ N A+ F A+ + S L + P L RL
Sbjct: 165 FHFAFESITNVMFGERLGMLEETVNPEAQKFIDAVYKMFHTS--VPLLNVPPELYRL--- 219
Query: 246 GLRRKMERD--------VGKALEIASKFVKE-RLEQKDKNVTGTSDEKRKDFLDVMLDFE 296
R K RD KA + F ++ R + + +N G L +L E
Sbjct: 220 -FRTKTWRDHVAAWDTIFNKAEKYTEIFYQDLRRKTEFRNYPGI--------LYCLLKSE 270
Query: 297 GNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVG 356
K+ +D+ I E+ G TTS T++W L E+ SLN + + +
Sbjct: 271 --------KMLLEDVKANITEMLAGGVNTTSMTLQWHLYEMA---RSLNVQEMLREEVLN 319
Query: 357 ADRTFEEDD---IDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLV 413
A R E D + +P LKA IKETLRLHP I + R D Q Y IP T V V
Sbjct: 320 ARRQAEGDISKMLQMVPLLKASIKETLRLHP-ISVTLQRYPESDLVLQDYLIPAKTLVQV 378
Query: 414 NAWAIGRDPEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLI 473
+A+GRDP + P F P R+L D ++ + FG G R C G +A + L
Sbjct: 379 AIYAMGRDPAFFSSPDKFDPTRWLSKDKDLI--HFRNLGFGWGVRQCVGRRIAELEMTLF 436
Query: 474 LGSLLHQFDWELDCKEEID 492
L +L F E+ ++D
Sbjct: 437 LIHILENFKVEMQHIGDVD 455
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 124/276 (44%), Gaps = 30/276 (10%)
Query: 248 RRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVS 307
+R+ + D+ ++ K + +R S E+ D L ML NGKD
Sbjct: 205 KRQFQEDIKVMNDLVDKIIADR---------KASGEQSDDLLTHML----NGKDPETGEP 251
Query: 308 EKDLNI--FILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDD 365
D NI I+ +AG ETTS + +AL L+ NP L KA AE A V D
Sbjct: 252 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQ 310
Query: 366 IDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQG-YHIPKDTQVLVNAWAIGRDPEV 424
+ L Y+ V+ E LRL P +P A EDT G Y + K +++V + RD +
Sbjct: 311 VKQLKYVGMVLNEALRLWPTVPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTI 369
Query: 425 W-DEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDW 483
W D+ F+PERF + + PFG G+R C G A L+LG +L FD+
Sbjct: 370 WGDDVEEFRPERFENPSAI---PQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDF 426
Query: 484 ELDCKEEIDMNDRM-----GITVR---KAEPLIAVP 511
E E+D+ + + G V+ K PL +P
Sbjct: 427 EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGIP 462
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 123/276 (44%), Gaps = 30/276 (10%)
Query: 248 RRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVS 307
+R+ + D+ ++ K + +R S E+ D L ML NGKD
Sbjct: 205 KRQFQEDIKVMNDLVDKIIADR---------KASGEQSDDLLTHML----NGKDPETGEP 251
Query: 308 EKDLNI--FILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDD 365
D NI I+ +AG ETTS + +AL L+ NP L KA AE A V D
Sbjct: 252 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQ 310
Query: 366 IDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQG-YHIPKDTQVLVNAWAIGRDPEV 424
+ L Y+ V+ E LRL P P A EDT G Y + K +++V + RD +
Sbjct: 311 VKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTI 369
Query: 425 W-DEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDW 483
W D+ F+PERF + + PFG G+R C G A L+LG +L FD+
Sbjct: 370 WGDDVEEFRPERFENPSAI---PQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDF 426
Query: 484 ELDCKEEIDMNDRM-----GITVR---KAEPLIAVP 511
E E+D+ + + G V+ K PL +P
Sbjct: 427 EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGIP 462
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 123/276 (44%), Gaps = 30/276 (10%)
Query: 248 RRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVS 307
+R+ + D+ ++ K + +R S E+ D L ML NGKD
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADR---------KASGEQSDDLLTHML----NGKDPETGEP 248
Query: 308 EKDLNI--FILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDD 365
D NI I+ +AG ETTS + +AL L+ NP L KA AE A V D
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQ 307
Query: 366 IDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQG-YHIPKDTQVLVNAWAIGRDPEV 424
+ L Y+ V+ E LRL P P A EDT G Y + K +++V + RD +
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTI 366
Query: 425 W-DEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDW 483
W D+ F+PERF + + PFG G+R C G A L+LG +L FD+
Sbjct: 367 WGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
Query: 484 ELDCKEEIDMNDRM-----GITVR---KAEPLIAVP 511
E E+D+ + + G V+ K PL +P
Sbjct: 424 EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGIP 459
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 123/276 (44%), Gaps = 30/276 (10%)
Query: 248 RRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVS 307
+R+ + D+ ++ K + +R S E+ D L ML NGKD
Sbjct: 203 KRQFQEDIKVMNDLVDKIIADR---------KASGEQSDDLLTHML----NGKDPETGEP 249
Query: 308 EKDLNI--FILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDD 365
D NI I+ +AG ETTS + +AL L+ NP L KA AE A V D
Sbjct: 250 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQ 308
Query: 366 IDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQG-YHIPKDTQVLVNAWAIGRDPEV 424
+ L Y+ V+ E LRL P P A EDT G Y + K +++V + RD +
Sbjct: 309 VKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTI 367
Query: 425 W-DEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDW 483
W D+ F+PERF + + PFG G+R C G A L+LG +L FD+
Sbjct: 368 WGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACPGQQFALHEATLVLGMMLKHFDF 424
Query: 484 ELDCKEEIDMNDRM-----GITVR---KAEPLIAVP 511
E E+D+ + + G V+ K PL +P
Sbjct: 425 EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGIP 460
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 123/276 (44%), Gaps = 30/276 (10%)
Query: 248 RRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVS 307
+R+ + D+ ++ K + +R S E+ D L ML NGKD
Sbjct: 203 KRQFQEDIKVMNDLVDKIIADR---------KASGEQSDDLLTHML----NGKDPETGEP 249
Query: 308 EKDLNI--FILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDD 365
D NI I+ +AG ETTS + +AL L+ NP L KA AE A V D
Sbjct: 250 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQ 308
Query: 366 IDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQG-YHIPKDTQVLVNAWAIGRDPEV 424
+ L Y+ V+ E LRL P P A EDT G Y + K +++V + RD +
Sbjct: 309 VKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTI 367
Query: 425 W-DEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDW 483
W D+ F+PERF + + PFG G+R C G A L+LG +L FD+
Sbjct: 368 WGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDF 424
Query: 484 ELDCKEEIDMNDRM-----GITVR---KAEPLIAVP 511
E E+D+ + + G V+ K PL +P
Sbjct: 425 EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGIP 460
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 123/276 (44%), Gaps = 30/276 (10%)
Query: 248 RRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVS 307
+R+ + D+ ++ K + +R S E+ D L ML NGKD
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADR---------KASGEQSDDLLTHML----NGKDPETGEP 248
Query: 308 EKDLNI--FILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDD 365
D NI I+ +AG ETTS + +AL L+ NP L KA AE A V D
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQ 307
Query: 366 IDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQG-YHIPKDTQVLVNAWAIGRDPEV 424
+ L Y+ V+ E LRL P P A EDT G Y + K +++V + RD +
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTI 366
Query: 425 W-DEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDW 483
W D+ F+PERF + + PFG G+R C G A L+LG +L FD+
Sbjct: 367 WGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACEGQQFALHEATLVLGMMLKHFDF 423
Query: 484 ELDCKEEIDMNDRM-----GITVR---KAEPLIAVP 511
E E+D+ + + G V+ K PL +P
Sbjct: 424 EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGIP 459
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 123/276 (44%), Gaps = 30/276 (10%)
Query: 248 RRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVS 307
+R+ + D+ ++ K + +R S E+ D L ML NGKD
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADR---------KASGEQSDDLLTHML----NGKDPETGEP 248
Query: 308 EKDLNI--FILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDD 365
D NI I+ +AG ETTS + +AL L+ NP L KA AE A V D
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQ 307
Query: 366 IDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQG-YHIPKDTQVLVNAWAIGRDPEV 424
+ L Y+ V+ E LRL P P A EDT G Y + K +++V + RD +
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTI 366
Query: 425 W-DEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDW 483
W D+ F+PERF + + PFG G+R C G A L+LG +L FD+
Sbjct: 367 WGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
Query: 484 ELDCKEEIDMNDRM-----GITVR---KAEPLIAVP 511
E E+D+ + + G V+ K PL +P
Sbjct: 424 EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGIP 459
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 123/276 (44%), Gaps = 30/276 (10%)
Query: 248 RRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVS 307
+R+ + D+ ++ K + +R S E+ D L ML NGKD
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADR---------KASGEQSDDLLTHML----NGKDPETGEP 248
Query: 308 EKDLNI--FILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDD 365
D NI I+ +AG ETTS + +AL L+ NP L KA AE A V D
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQ 307
Query: 366 IDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQG-YHIPKDTQVLVNAWAIGRDPEV 424
+ L Y+ V+ E LRL P P A EDT G Y + K +++V + RD +
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTI 366
Query: 425 W-DEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDW 483
W D+ F+PERF + + PFG G+R C G A L+LG +L FD+
Sbjct: 367 WGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGKQFALHEATLVLGMMLKHFDF 423
Query: 484 ELDCKEEIDMNDRM-----GITVR---KAEPLIAVP 511
E E+D+ + + G V+ K PL +P
Sbjct: 424 EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGIP 459
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 123/276 (44%), Gaps = 30/276 (10%)
Query: 248 RRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVS 307
+R+ + D+ ++ K + +R S E+ D L ML NGKD
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADR---------KASGEQSDDLLTHML----NGKDPETGEP 248
Query: 308 EKDLNI--FILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDD 365
D NI I+ +AG ETTS + +AL L+ NP L KA AE A V D
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQ 307
Query: 366 IDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQG-YHIPKDTQVLVNAWAIGRDPEV 424
+ L Y+ V+ E LRL P P A EDT G Y + K +++V + RD +
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTI 366
Query: 425 W-DEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDW 483
W D+ F+PERF + + PFG G+R C G A L+LG +L FD+
Sbjct: 367 WGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
Query: 484 ELDCKEEIDMNDRM-----GITVR---KAEPLIAVP 511
E E+D+ + + G V+ K PL +P
Sbjct: 424 EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGIP 459
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 123/276 (44%), Gaps = 30/276 (10%)
Query: 248 RRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVS 307
+R+ + D+ ++ K + +R S E+ D L ML NGKD
Sbjct: 203 KRQFQEDIKVMNDLVDKIIADR---------KASGEQSDDLLTHML----NGKDPETGEP 249
Query: 308 EKDLNI--FILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDD 365
D NI I+ +AG ETTS + +AL L+ NP L KA AE A V D
Sbjct: 250 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQ 308
Query: 366 IDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQG-YHIPKDTQVLVNAWAIGRDPEV 424
+ L Y+ V+ E LRL P P A EDT G Y + K +++V + RD +
Sbjct: 309 VKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTI 367
Query: 425 W-DEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDW 483
W D+ F+PERF + + PFG G+R C G A L+LG +L FD+
Sbjct: 368 WGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDF 424
Query: 484 ELDCKEEIDMNDRM-----GITVR---KAEPLIAVP 511
E E+D+ + + G V+ K PL +P
Sbjct: 425 EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGIP 460
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 115/256 (44%), Gaps = 22/256 (8%)
Query: 248 RRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVS 307
+R+ + D+ ++ K + +R S E+ D L ML NGKD
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADR---------KASGEQSDDLLTQML----NGKDPETGEP 248
Query: 308 EKDLNIF--ILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDD 365
D NI I+ +AG ETTS + +AL L+ NP L K AE A V D
Sbjct: 249 LDDGNISYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKV-AEEATRVLVDPVPSYKQ 307
Query: 366 IDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQG-YHIPKDTQVLVNAWAIGRDPEV 424
+ L Y+ V+ E LRL P P A EDT G Y + K +V+V + RD +
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDEVMVLIPQLHRDKTI 366
Query: 425 W-DEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDW 483
W D+ F+PERF + + PFG G+R C G A L+LG +L FD+
Sbjct: 367 WGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
Query: 484 ELDCKEEIDMNDRMGI 499
E E+D+ + + +
Sbjct: 424 EDHTNYELDIKETLTL 439
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 123/276 (44%), Gaps = 30/276 (10%)
Query: 248 RRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVS 307
+R+ + D+ ++ K + +R S E+ D L ML NGKD
Sbjct: 205 KRQFQEDIKVMNDLVDKIIADR---------KASGEQSDDLLTHML----NGKDPETGEP 251
Query: 308 EKDLNI--FILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDD 365
D NI I+ +AG ETTS + +AL L+ NP L KA AE A V D
Sbjct: 252 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQ 310
Query: 366 IDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQG-YHIPKDTQVLVNAWAIGRDPEV 424
+ L Y+ V+ E LRL P P A EDT G Y + K +++V + RD +
Sbjct: 311 VKQLKYVGMVLNEALRLWPTSPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTI 369
Query: 425 W-DEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDW 483
W D+ F+PERF + + PFG G+R C G A L+LG +L FD+
Sbjct: 370 WGDDVEEFRPERFENPSAI---PQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDF 426
Query: 484 ELDCKEEIDMNDRM-----GITVR---KAEPLIAVP 511
E E+D+ + + G V+ K PL +P
Sbjct: 427 EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGIP 462
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 116/256 (45%), Gaps = 22/256 (8%)
Query: 248 RRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVS 307
+R+ + D+ ++ K + +R S E+ D L ML NGKD
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADR---------KASGEQSDDLLTHML----NGKDPETGEP 248
Query: 308 EKDLNI--FILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDD 365
D NI I+ +AG ETTS + +AL L+ NP L KA AE A V D
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQ 307
Query: 366 IDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQG-YHIPKDTQVLVNAWAIGRDPEV 424
+ L Y+ V+ E LRL P P A EDT G Y + K +++V + RD +
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTI 366
Query: 425 W-DEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDW 483
W D+ F+PERF + + PFG G+R C G A L+LG +L FD+
Sbjct: 367 WGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
Query: 484 ELDCKEEIDMNDRMGI 499
E E+D+ + + +
Sbjct: 424 EDHTNYELDIKETLTL 439
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 116/256 (45%), Gaps = 22/256 (8%)
Query: 248 RRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVS 307
+R+ + D+ ++ K + +R S E+ D L ML NGKD
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADR---------KASGEQSDDLLTHML----NGKDPETGEP 248
Query: 308 EKDLNI--FILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDD 365
D NI I+ +AG ETTS + +AL L+ NP L KA AE A V D
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQ 307
Query: 366 IDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQG-YHIPKDTQVLVNAWAIGRDPEV 424
+ L Y+ V+ E LRL P P A EDT G Y + K +++V + RD +
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTI 366
Query: 425 W-DEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDW 483
W D+ F+PERF + + PFG G+R C G A L+LG +L FD+
Sbjct: 367 WGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
Query: 484 ELDCKEEIDMNDRMGI 499
E E+D+ + + +
Sbjct: 424 EDHTNYELDIKETLTL 439
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 116/256 (45%), Gaps = 22/256 (8%)
Query: 248 RRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVS 307
+R+ + D+ ++ K + +R S E+ D L ML NGKD
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADR---------KASGEQSDDLLTHML----NGKDPETGEP 248
Query: 308 EKDLNI--FILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDD 365
D NI I+ +AG ETTS + +AL L+ NP L KA AE A V D
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQ 307
Query: 366 IDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQG-YHIPKDTQVLVNAWAIGRDPEV 424
+ L Y+ V+ E LRL P P A EDT G Y + K +++V + RD +
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTI 366
Query: 425 W-DEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDW 483
W D+ F+PERF + + PFG G+R C G A L+LG +L FD+
Sbjct: 367 WGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
Query: 484 ELDCKEEIDMNDRMGI 499
E E+D+ + + +
Sbjct: 424 EDHTNYELDIKETLTL 439
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 116/256 (45%), Gaps = 22/256 (8%)
Query: 248 RRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVS 307
+R+ + D+ ++ K + +R S E+ D L ML NGKD
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADR---------KASGEQSDDLLTHML----NGKDPETGEP 248
Query: 308 EKDLNI--FILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDD 365
D NI I+ +AG ETTS + +AL L+ NP L KA AE A V D
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQ 307
Query: 366 IDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQG-YHIPKDTQVLVNAWAIGRDPEV 424
+ L Y+ V+ E LRL P P A EDT G Y + K +++V + RD +
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTI 366
Query: 425 W-DEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDW 483
W D+ F+PERF + + PFG G+R C G A L+LG +L FD+
Sbjct: 367 WGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
Query: 484 ELDCKEEIDMNDRMGI 499
E E+D+ + + +
Sbjct: 424 EDHTNYELDIKETLTL 439
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 123/276 (44%), Gaps = 30/276 (10%)
Query: 248 RRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVS 307
+R+ + D+ ++ K + +R S E+ D L ML NGKD
Sbjct: 203 KRQFQEDIKVMNDLVDKIIADR---------KASGEQSDDLLTHML----NGKDPETGEP 249
Query: 308 EKDLNI--FILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDD 365
D NI I+ +AG ETTS + +AL L+ NP L KA AE A V D
Sbjct: 250 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQ 308
Query: 366 IDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQG-YHIPKDTQVLVNAWAIGRDPEV 424
+ L Y+ V+ E LRL P P A EDT G Y + K +++V + RD +
Sbjct: 309 VKQLKYVGMVLNEALRLWPTAPPFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTI 367
Query: 425 W-DEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDW 483
W D+ F+PERF + + PFG G+R C G A L+LG +L FD+
Sbjct: 368 WGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDF 424
Query: 484 ELDCKEEIDMNDRM-----GITVR---KAEPLIAVP 511
E E+D+ + + G V+ K PL +P
Sbjct: 425 EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGIP 460
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 126/290 (43%), Gaps = 35/290 (12%)
Query: 239 LRRLDPQGL-----RRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDVML 293
LRR +P +R+ + D+ ++ K + +R S E+ D L ML
Sbjct: 189 LRRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADR---------KASGEQSDDLLTHML 239
Query: 294 DFEGNGKDEPAKVSEKDLNI--FILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAEL 351
NGKD D NI I+ AG E TS + +AL L+ NP L KA AE
Sbjct: 240 ----NGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHELQKA-AEE 294
Query: 352 AQAVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQG-YHIPKDTQ 410
A V D + L Y+ V+ E LRL P P A EDT G Y + K +
Sbjct: 295 AARVLVDPVPSHKQVKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDE 353
Query: 411 VLVNAWAIGRDPEVW-DEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRM 469
++V + RD VW D+ F+PERF + + PFG G+R C G A
Sbjct: 354 LMVLIPQLHRDKTVWGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGQQFALHE 410
Query: 470 LHLILGSLLHQFDWELDCKEEIDMNDRM-----GITVR---KAEPLIAVP 511
L+LG +L FD+E E+D+ + + G V+ K PL +P
Sbjct: 411 ATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGIP 460
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 123/276 (44%), Gaps = 30/276 (10%)
Query: 248 RRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVS 307
+R+ + D+ ++ K + +R S E+ D L ML NGKD
Sbjct: 203 KRQFQEDIKVMNDLVDKIIADR---------KASGEQSDDLLTHML----NGKDPETGEP 249
Query: 308 EKDLNI--FILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDD 365
D NI I+ +AG E+TS + +AL L+ NP L KA AE A V D
Sbjct: 250 LDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQ 308
Query: 366 IDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQG-YHIPKDTQVLVNAWAIGRDPEV 424
+ L Y+ V+ E LRL P P A EDT G Y + K +++V + RD +
Sbjct: 309 VKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTI 367
Query: 425 W-DEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDW 483
W D+ F+PERF + + PFG G+R C G A L+LG +L FD+
Sbjct: 368 WGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDF 424
Query: 484 ELDCKEEIDMNDRM-----GITVR---KAEPLIAVP 511
E E+D+ + + G V+ K PL +P
Sbjct: 425 EDHTNYELDIKETLLLKPEGFVVKAKSKKIPLGGIP 460
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 123/276 (44%), Gaps = 30/276 (10%)
Query: 248 RRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVS 307
+R+ + D+ ++ K + +R S E+ D L ML NGKD
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADR---------KASGEQSDDLLTHML----NGKDPETGEP 248
Query: 308 EKDLNI--FILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDD 365
D NI I+ +AG E+TS + +AL L+ NP L KA AE A V D
Sbjct: 249 LDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQ 307
Query: 366 IDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQG-YHIPKDTQVLVNAWAIGRDPEV 424
+ L Y+ V+ E LRL P P A EDT G Y + K +++V + RD +
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTI 366
Query: 425 W-DEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDW 483
W D+ F+PERF + + PFG G+R C G A L+LG +L FD+
Sbjct: 367 WGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
Query: 484 ELDCKEEIDMNDRM-----GITVR---KAEPLIAVP 511
E E+D+ + + G V+ K PL +P
Sbjct: 424 EDHTNYELDIKETLLLKPEGFVVKAKSKKIPLGGIP 459
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 122/276 (44%), Gaps = 30/276 (10%)
Query: 248 RRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVS 307
+R+ + D+ ++ K + +R S E+ D L ML NGKD
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADR---------KASGEQSDDLLTHML----NGKDPETGEP 248
Query: 308 EKDLNI--FILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDD 365
D NI I+ + G ETTS + +AL L+ NP L KA AE A V D
Sbjct: 249 LDDENIRYQIITFLICGHETTSGLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQ 307
Query: 366 IDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQG-YHIPKDTQVLVNAWAIGRDPEV 424
+ L Y+ V+ E LRL P P A EDT G Y + K +++V + RD +
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTI 366
Query: 425 W-DEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDW 483
W D+ F+PERF + + PFG G+R C G A L+LG +L FD+
Sbjct: 367 WGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
Query: 484 ELDCKEEIDMNDRM-----GITVR---KAEPLIAVP 511
E E+D+ + + G V+ K PL +P
Sbjct: 424 EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGIP 459
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 123/276 (44%), Gaps = 30/276 (10%)
Query: 248 RRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVS 307
+R+ + D+ ++ K + +R S E+ D L ML NGKD
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADR---------KASGEQSDDLLTHML----NGKDPETGEP 248
Query: 308 EKDLNI--FILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDD 365
D NI I+ +AG ETTS + +AL L+ NP L KA AE A V D
Sbjct: 249 LDDENIRYQIITELIAGHETTSGLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQ 307
Query: 366 IDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQG-YHIPKDTQVLVNAWAIGRDPEV 424
+ L Y+ V+ E LRL P P A EDT G Y + K +++V + RD +
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTI 366
Query: 425 W-DEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDW 483
W D+ F+PERF + + PFG G+R C G A L+LG +L FD+
Sbjct: 367 WGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
Query: 484 ELDCKEEIDMNDRM-----GITVR---KAEPLIAVP 511
E E+D+ + + G V+ K PL +P
Sbjct: 424 EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGIP 459
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 116/256 (45%), Gaps = 22/256 (8%)
Query: 248 RRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVS 307
+R+ + D+ ++ K + +R S E+ D L ML NGKD
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADR---------KASGEQSDDLLTHML----NGKDPETGEP 248
Query: 308 EKDLNI--FILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDD 365
D NI I+ +AG ETTS + +AL L+ NP L KA AE A V D
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQ 307
Query: 366 IDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQG-YHIPKDTQVLVNAWAIGRDPEV 424
+ L Y+ V+ E LRL P P A EDT G Y + K +++V + RD +
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTI 366
Query: 425 W-DEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDW 483
W D+ F+PERF + + P+G G+R C G A L+LG +L FD+
Sbjct: 367 WGDDVEEFRPERFENPSA---IPQHAFKPYGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
Query: 484 ELDCKEEIDMNDRMGI 499
E E+D+ + + +
Sbjct: 424 EDHTNYELDIKETLTL 439
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 122/276 (44%), Gaps = 30/276 (10%)
Query: 248 RRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVS 307
+R+ + D+ ++ K + +R S E+ D L ML NGKD
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADR---------KASGEQSDDLLTHML----NGKDPETGEP 248
Query: 308 EKDLNI--FILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDD 365
D NI I+ + G ETTS + +AL L+ NP L KA AE A V D
Sbjct: 249 LDDENIRYQIITFLIKGHETTSGLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQ 307
Query: 366 IDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQG-YHIPKDTQVLVNAWAIGRDPEV 424
+ L Y+ V+ E LRL P P A EDT G Y + K +++V + RD +
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTI 366
Query: 425 W-DEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDW 483
W D+ F+PERF + + PFG G+R C G A L+LG +L FD+
Sbjct: 367 WGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
Query: 484 ELDCKEEIDMNDRM-----GITVR---KAEPLIAVP 511
E E+D+ + + G V+ K PL +P
Sbjct: 424 EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGIP 459
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 122/276 (44%), Gaps = 30/276 (10%)
Query: 248 RRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVS 307
+R+ + D+ ++ K + +R S E+ D L ML NGKD
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADR---------KASGEQSDDLLTHML----NGKDPETGEP 248
Query: 308 EKDLNI--FILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDD 365
D NI I+ + G ETTS + +AL L+ NP L KA AE A V D
Sbjct: 249 LDDENIRYQIITFLIQGHETTSGLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQ 307
Query: 366 IDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQG-YHIPKDTQVLVNAWAIGRDPEV 424
+ L Y+ V+ E LRL P P A EDT G Y + K +++V + RD +
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTI 366
Query: 425 W-DEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDW 483
W D+ F+PERF + + PFG G+R C G A L+LG +L FD+
Sbjct: 367 WGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
Query: 484 ELDCKEEIDMNDRM-----GITVR---KAEPLIAVP 511
E E+D+ + + G V+ K PL +P
Sbjct: 424 EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGIP 459
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 122/276 (44%), Gaps = 30/276 (10%)
Query: 248 RRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVS 307
+R+ + D+ ++ K + +R S E+ D L ML NGKD
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADR---------KASGEQSDDLLTHML----NGKDPETGEP 248
Query: 308 EKDLNI--FILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDD 365
D NI I+ +AG E TS + +AL L+ NP L KA AE A V D
Sbjct: 249 LDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQ 307
Query: 366 IDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQG-YHIPKDTQVLVNAWAIGRDPEV 424
+ L Y+ V+ E LRL P P A EDT G Y + K +++V + RD +
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTI 366
Query: 425 W-DEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDW 483
W D+ F+PERF + + PFG G+R C G A L+LG +L FD+
Sbjct: 367 WGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
Query: 484 ELDCKEEIDMNDRM-----GITVR---KAEPLIAVP 511
E E+D+ + + G V+ K PL +P
Sbjct: 424 EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGIP 459
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 122/276 (44%), Gaps = 30/276 (10%)
Query: 248 RRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVS 307
+R+ + D+ ++ K + +R S E+ D L ML NGKD
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADR---------KASGEQSDDLLTHML----NGKDPETGEP 248
Query: 308 EKDLNI--FILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDD 365
D NI I+ + G ETTS + +AL L+ NP L KA AE A V D
Sbjct: 249 LDDENIRYQIITFLIMGHETTSGLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQ 307
Query: 366 IDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQG-YHIPKDTQVLVNAWAIGRDPEV 424
+ L Y+ V+ E LRL P P A EDT G Y + K +++V + RD +
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTI 366
Query: 425 W-DEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDW 483
W D+ F+PERF + + PFG G+R C G A L+LG +L FD+
Sbjct: 367 WGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
Query: 484 ELDCKEEIDMNDRM-----GITVR---KAEPLIAVP 511
E E+D+ + + G V+ K PL +P
Sbjct: 424 EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGIP 459
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 122/276 (44%), Gaps = 30/276 (10%)
Query: 248 RRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVS 307
+R+ + D+ ++ K + +R S E+ D L ML NGKD
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADR---------KASGEQSDDLLTHML----NGKDPETGEP 248
Query: 308 EKDLNI--FILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDD 365
D NI I+ + G ETTS + +AL L+ NP L KA AE A V D
Sbjct: 249 LDDENIRYQIITFLIHGHETTSGLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQ 307
Query: 366 IDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQG-YHIPKDTQVLVNAWAIGRDPEV 424
+ L Y+ V+ E LRL P P A EDT G Y + K +++V + RD +
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTI 366
Query: 425 W-DEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDW 483
W D+ F+PERF + + PFG G+R C G A L+LG +L FD+
Sbjct: 367 WGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
Query: 484 ELDCKEEIDMNDRM-----GITVR---KAEPLIAVP 511
E E+D+ + + G V+ K PL +P
Sbjct: 424 EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGIP 459
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 122/276 (44%), Gaps = 30/276 (10%)
Query: 248 RRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVS 307
+R+ + D+ ++ K + +R S E+ D L ML NGKD
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADR---------KASGEQSDDLLTHML----NGKDPETGEP 248
Query: 308 EKDLNI--FILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDD 365
D NI I+ +AG E+TS + +AL L+ NP L KA AE A V D
Sbjct: 249 LDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQ 307
Query: 366 IDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQG-YHIPKDTQVLVNAWAIGRDPEV 424
+ L Y+ V+ E LRL P P A EDT G Y + K +++V + RD +
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTI 366
Query: 425 W-DEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDW 483
W D+ F+PERF + + PFG G+R C G A L+LG +L FD+
Sbjct: 367 WGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
Query: 484 ELDCKEEIDMNDRM-----GITVR---KAEPLIAVP 511
E E+D+ + G V+ K PL +P
Sbjct: 424 EDHTNYELDIKETQLLKPEGFVVKAKSKKIPLGGIP 459
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 122/276 (44%), Gaps = 30/276 (10%)
Query: 248 RRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVS 307
+R+ + D+ ++ K + +R S E+ D L ML NGKD
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADR---------KASGEQSDDLLTHML----NGKDPETGEP 248
Query: 308 EKDLNI--FILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDD 365
D NI I+ + G ETTS + +AL L+ NP L KA AE A V D
Sbjct: 249 LDDENIRYQIITFLIEGHETTSGLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQ 307
Query: 366 IDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQG-YHIPKDTQVLVNAWAIGRDPEV 424
+ L Y+ V+ E LRL P P A EDT G Y + K +++V + RD +
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTI 366
Query: 425 W-DEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDW 483
W D+ F+PERF + + PFG G+R C G A L+LG +L FD+
Sbjct: 367 WGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
Query: 484 ELDCKEEIDMNDRM-----GITVR---KAEPLIAVP 511
E E+D+ + + G V+ K PL +P
Sbjct: 424 EDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGIP 459
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 126/290 (43%), Gaps = 35/290 (12%)
Query: 239 LRRLDPQGL-----RRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDVML 293
LRR +P +R+ + D+ ++ K + +R S E+ D L ML
Sbjct: 188 LRRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADR---------KASGEQSDDLLTHML 238
Query: 294 DFEGNGKDEPAKVSEKDLNI--FILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAEL 351
NGKD D NI I+ AG E TS + +AL L+ NP L KA AE
Sbjct: 239 ----NGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHELQKA-AEE 293
Query: 352 AQAVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQG-YHIPKDTQ 410
A V D + L Y+ V+ E LRL P P A EDT G Y + K +
Sbjct: 294 AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDE 352
Query: 411 VLVNAWAIGRDPEVW-DEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRM 469
++V + RD +W D+ F+PERF + + PFG G+R C G A
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGQQFALHE 409
Query: 470 LHLILGSLLHQFDWELDCKEEIDMNDRM-----GITVR---KAEPLIAVP 511
L+LG +L FD+E E+D+ + + G V+ K PL +P
Sbjct: 410 ATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGIP 459
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 115/256 (44%), Gaps = 22/256 (8%)
Query: 248 RRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVS 307
+R+ + D+ ++ K + +R S E+ D L ML NGKD
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADR---------KASGEQSDDLLTHML----NGKDPETGEP 248
Query: 308 EKDLNI--FILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDD 365
D NI I+ +AG E TS + +AL L+ NP L KA AE A V D
Sbjct: 249 LDDENIRYQIITFLIAGHENTSGLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQ 307
Query: 366 IDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQG-YHIPKDTQVLVNAWAIGRDPEV 424
+ L Y+ V+ E LRL P P A EDT G Y + K +++V + RD +
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTI 366
Query: 425 W-DEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDW 483
W D+ F+PERF + + PFG G+R C G A L+LG +L FD+
Sbjct: 367 WGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
Query: 484 ELDCKEEIDMNDRMGI 499
E E+D+ + + +
Sbjct: 424 EDHTNYELDIKETLTL 439
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 115/256 (44%), Gaps = 22/256 (8%)
Query: 248 RRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVS 307
+R+ + D+ ++ K + +R S E+ D L ML NGKD
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADR---------KASGEQSDDLLTHML----NGKDPETGEP 248
Query: 308 EKDLNI--FILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDD 365
D NI I+ +AG E TS + +AL L+ NP L KA AE A V D
Sbjct: 249 LDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQ 307
Query: 366 IDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQG-YHIPKDTQVLVNAWAIGRDPEV 424
+ L Y+ V+ E LRL P P A EDT G Y + K +++V + RD +
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTI 366
Query: 425 W-DEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDW 483
W D+ F+PERF + + PFG G+R C G A L+LG +L FD+
Sbjct: 367 WGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
Query: 484 ELDCKEEIDMNDRMGI 499
E E+D+ + + +
Sbjct: 424 EDHTNYELDIKETLTL 439
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 115/256 (44%), Gaps = 22/256 (8%)
Query: 248 RRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVS 307
+R+ + D+ ++ K + +R S E+ D L ML NGKD
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADR---------KASGEQSDDLLTHML----NGKDPETGEP 248
Query: 308 EKDLNI--FILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDD 365
D NI I+ +AG E TS + +AL L+ NP L KA AE A V D
Sbjct: 249 LDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQ 307
Query: 366 IDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQG-YHIPKDTQVLVNAWAIGRDPEV 424
+ L Y+ V+ E LRL P P A EDT G Y + K +++V + RD +
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTI 366
Query: 425 W-DEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDW 483
W D+ F+PERF + + PFG G+R C G A L+LG +L FD+
Sbjct: 367 WGDDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
Query: 484 ELDCKEEIDMNDRMGI 499
E E+D+ + + +
Sbjct: 424 EDHTNYELDIKETLTL 439
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 124/274 (45%), Gaps = 26/274 (9%)
Query: 248 RRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVS 307
+R+ + D+ ++ K + +R S E+ D L ML + EP +
Sbjct: 203 KRQFQEDIKVMNDLVDKIIADR---------KASGEQSDDLLTHMLHGKDPETGEP--LD 251
Query: 308 EKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDDID 367
++++ I+ +AG ETTS + +AL L+ NP L KA AE A V D +
Sbjct: 252 DENIRYQIITFLIAGHETTSGLLTFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVK 310
Query: 368 NLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQG-YHIPKDTQVLVNAWAIGRDPEVW- 425
L Y+ V+ E LR+ P P A EDT G Y + K +++V + RD VW
Sbjct: 311 QLKYVGMVLNEALRIWPTAPAFS-LYAKEDTMLGGEYPLEKGDELMVLIPQLHRDKTVWG 369
Query: 426 DEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDWEL 485
D+ F+PERF + + PFG G+R C G A L+LG +L FD+E
Sbjct: 370 DDVEEFRPERFENPSA---IPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFED 426
Query: 486 DCKEEIDMNDRM-----GITVR---KAEPLIAVP 511
E+D+ + + G ++ K PL +P
Sbjct: 427 HTNYELDIEETLTLKPKGFVIKAKSKKIPLGGIP 460
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 123/274 (44%), Gaps = 26/274 (9%)
Query: 248 RRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVS 307
+R+ + D+ ++ K + +R S E+ D L ML + EP +
Sbjct: 208 KRQFQEDIKVMNDLVDKIIADR---------KASGEQSDDLLTHMLHGKDPETGEP--LD 256
Query: 308 EKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDDID 367
++++ I+ +AG ETTS + + L L+ NP L KA AE A V D +
Sbjct: 257 DENIRYQIVTFLIAGHETTSGLLSFTLYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVK 315
Query: 368 NLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQG-YHIPKDTQVLVNAWAIGRDPEVW- 425
L Y+ V+ E LRL P P A EDT G Y + K +++V + RD +W
Sbjct: 316 QLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDEIMVLIPQLHRDKTIWG 374
Query: 426 DEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDWEL 485
D+ F+PERF + + PFG G+R C G A L+LG +L FD+E
Sbjct: 375 DDVEEFRPERFENPSAI---PQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFED 431
Query: 486 DCKEEIDMNDRM-----GITVR---KAEPLIAVP 511
E+D+ + + G V+ K PL +P
Sbjct: 432 HTNYELDIKETLTLKPEGFVVKAKSKKIPLGGIP 465
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 116/256 (45%), Gaps = 22/256 (8%)
Query: 248 RRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVS 307
+R+ + D+ ++ K + +R S E+ D L ML NGKD
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADR---------KASGEQSDDLLTHML----NGKDPETGEP 248
Query: 308 EKDLNI--FILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDD 365
D NI I+ +AG ETTS + +AL L+ NP L KA AE A V D
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQ 307
Query: 366 IDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQG-YHIPKDTQVLVNAWAIGRDPEV 424
+ L Y+ V+ E LRL P P A EDT G Y + K +++V + RD +
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTI 366
Query: 425 W-DEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDW 483
W D+ F+PERF + + P+G G+R C G A L+LG +L FD+
Sbjct: 367 WGDDVEEFRPERFENPSA---IPQHAFKPWGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
Query: 484 ELDCKEEIDMNDRMGI 499
E E+D+ + + +
Sbjct: 424 EDHTNYELDIKETLTL 439
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 115/256 (44%), Gaps = 22/256 (8%)
Query: 248 RRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVS 307
+R+ + D+ ++ K + +R S E+ D L ML NGKD
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADR---------KASGEQSDDLLTHML----NGKDPETGEP 248
Query: 308 EKDLNI--FILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDD 365
D NI I+ +AG ETTS + +AL L+ NP L KA AE A V D
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQ 307
Query: 366 IDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQG-YHIPKDTQVLVNAWAIGRDPEV 424
+ L Y+ V+ E LRL P P A EDT G Y + K +++V + RD +
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTI 366
Query: 425 W-DEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDW 483
W D+ F+PERF + + P G G+R C G A L+LG +L FD+
Sbjct: 367 WGDDVEEFRPERFENPSA---IPQHAFKPHGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
Query: 484 ELDCKEEIDMNDRMGI 499
E E+D+ + + +
Sbjct: 424 EDHTNYELDIKETLTL 439
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 121/276 (43%), Gaps = 30/276 (10%)
Query: 248 RRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVS 307
+R+ + D+ ++ K + +R S E+ D L ML NGKD
Sbjct: 203 KRQFQEDIKVMNDLVDKIIADR---------KASGEQSDDLLTHML----NGKDPETGEP 249
Query: 308 EKDLNI--FILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDD 365
D NI I+ AG E TS + +AL L+ NP L KA AE A V D
Sbjct: 250 LDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQ 308
Query: 366 IDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQG-YHIPKDTQVLVNAWAIGRDPEV 424
+ L Y+ V+ E LRL P P A EDT G Y + K +++V + RD +
Sbjct: 309 VKQLKYVGMVLNEALRLWPTGPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTI 367
Query: 425 W-DEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDW 483
W D+ F+PERF + + PFG G+R C G A L+LG +L FD+
Sbjct: 368 WGDDVEEFRPERFENPSAI---PQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDF 424
Query: 484 ELDCKEEIDMNDRM-----GITVR---KAEPLIAVP 511
E E+D+ + + G V+ K PL +P
Sbjct: 425 EDHTNYELDIKETLVLKPEGFVVKAKSKKIPLGGIP 460
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 115/256 (44%), Gaps = 22/256 (8%)
Query: 248 RRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVS 307
+R+ + D+ ++ K + +R S E+ D L ML NGKD
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADR---------KASGEQSDDLLTHML----NGKDPETGEP 248
Query: 308 EKDLNI--FILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDD 365
D NI I+ +AG ETTS + +AL L+ NP L KA AE A V D
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQ 307
Query: 366 IDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQG-YHIPKDTQVLVNAWAIGRDPEV 424
+ L Y+ V+ E LRL P P A EDT G Y + K +++V + RD +
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTI 366
Query: 425 W-DEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDW 483
W D+ F+PERF + + P G G+R C G A L+LG +L FD+
Sbjct: 367 WGDDVEEFRPERFENPSA---IPQHAFKPAGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
Query: 484 ELDCKEEIDMNDRMGI 499
E E+D+ + + +
Sbjct: 424 EDHTNYELDIKETLTL 439
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 121/276 (43%), Gaps = 30/276 (10%)
Query: 248 RRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVS 307
+R+ + D+ ++ K + +R S E+ D L ML NGKD
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADR---------KASGEQSDDLLTHML----NGKDPETGEP 248
Query: 308 EKDLNI--FILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDD 365
D NI I+ AG E TS + +AL L+ NP L KA AE A V D
Sbjct: 249 LDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQ 307
Query: 366 IDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQG-YHIPKDTQVLVNAWAIGRDPEV 424
+ L Y+ V+ E LRL P P A EDT G Y + K +++V + RD +
Sbjct: 308 VKQLKYVGMVLNEALRLWPTGPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTI 366
Query: 425 W-DEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDW 483
W D+ F+PERF + + PFG G+R C G A L+LG +L FD+
Sbjct: 367 WGDDVEEFRPERFENPSAI---PQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDF 423
Query: 484 ELDCKEEIDMNDRM-----GITVR---KAEPLIAVP 511
E E+D+ + + G V+ K PL +P
Sbjct: 424 EDHTNYELDIKETLVLKPEGFVVKAKSKKIPLGGIP 459
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 101/429 (23%), Positives = 186/429 (43%), Gaps = 32/429 (7%)
Query: 77 QKYGDVIWLKFGAINTMVILSAKAATDFFKNHDSTFAERKVTETMRVHGYDKSSLA-LAP 135
QKYG + K G + ++ ++ + FK+ + + H Y + + L
Sbjct: 43 QKYGPIYREKLGNVESVYVIDPEDVALLFKSEGPNPERFLIPPWVAYHQYYQRPIGVLLK 102
Query: 136 YGAFWRVLRRLVTVEMLVTKRINETA----SVRRKCVNDMLLWIEQEASGVHVARL---V 188
A W+ R + E++ + +V R V+ + I++ SG + + +
Sbjct: 103 KSAAWKKDRVALNQEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDDL 162
Query: 189 FLSTFNLLGNLMLS--RDLLDRESNDGAE-FFQAMMGLMEWSGHANLADFFPILRRLDPQ 245
F F + N++ + +L+ N A+ F A+ + S + + P L RL
Sbjct: 163 FRFAFESITNVIFGERQGMLEEVVNPEAQRFIDAIYQMFHTS--VPMLNLPPDLFRL--- 217
Query: 246 GLRRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEK---RKDFLDVMLDFEGNGKDE 302
R K +D A ++ + + + +N +K D+ ++ G+
Sbjct: 218 -FRTKTWKDHVAAWDV----IFSKADIYTQNFYWELRQKGSVHHDYRGILYRLLGD---- 268
Query: 303 PAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFE 362
+K+S +D+ + E+ G +TTS T++W L E+ N + + +AE+ A +
Sbjct: 269 -SKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDM 327
Query: 363 EDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDP 422
+ +P LKA IKETLRLHP I + R + D + Y IP T V V +A+GR+P
Sbjct: 328 ATMLQLVPLLKASIKETLRLHP-ISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREP 386
Query: 423 EVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFD 482
+ +P +F P R+L D + + FG G R C G +A + + L ++L F
Sbjct: 387 TFFFDPENFDPTRWLSK--DKNITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFR 444
Query: 483 WELDCKEEI 491
E+ ++
Sbjct: 445 VEIQHLSDV 453
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 101/429 (23%), Positives = 186/429 (43%), Gaps = 32/429 (7%)
Query: 77 QKYGDVIWLKFGAINTMVILSAKAATDFFKNHDSTFAERKVTETMRVHGYDKSSLA-LAP 135
QKYG + K G + ++ ++ + FK+ + + H Y + + L
Sbjct: 40 QKYGPIYREKLGNVESVYVIDPEDVALLFKSEGPNPERFLIPPWVAYHQYYQRPIGVLLK 99
Query: 136 YGAFWRVLRRLVTVEMLVTKRINE----TASVRRKCVNDMLLWIEQEASGVHVARL---V 188
A W+ R + E++ + +V R V+ + I++ SG + + +
Sbjct: 100 KSAAWKKDRVALNQEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDDL 159
Query: 189 FLSTFNLLGNLMLS--RDLLDRESNDGAE-FFQAMMGLMEWSGHANLADFFPILRRLDPQ 245
F F + N++ + +L+ N A+ F A+ + S + + P L RL
Sbjct: 160 FRFAFESITNVIFGERQGMLEEVVNPEAQRFIDAIYQMFHTS--VPMLNLPPDLFRL--- 214
Query: 246 GLRRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEK---RKDFLDVMLDFEGNGKDE 302
R K +D A ++ + + + +N +K D+ ++ G+
Sbjct: 215 -FRTKTWKDHVAAWDV----IFSKADIYTQNFYWELRQKGSVHHDYRGILYRLLGD---- 265
Query: 303 PAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFE 362
+K+S +D+ + E+ G +TTS T++W L E+ N + + +AE+ A +
Sbjct: 266 -SKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDM 324
Query: 363 EDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDP 422
+ +P LKA IKETLRLHP I + R + D + Y IP T V V +A+GR+P
Sbjct: 325 ATMLQLVPLLKASIKETLRLHP-ISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREP 383
Query: 423 EVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFD 482
+ +P +F P R+L D + + FG G R C G +A + + L ++L F
Sbjct: 384 TFFFDPENFDPTRWLSK--DKNITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFR 441
Query: 483 WELDCKEEI 491
E+ ++
Sbjct: 442 VEIQHLSDV 450
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 104/250 (41%), Gaps = 14/250 (5%)
Query: 244 PQGLRRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEP 303
P L K +R L K +K R +Q +D L ++L D
Sbjct: 189 PNTLFGKSQRARALLLAELEKIIKARQQQPPSE---------EDALGILL---AARDDNN 236
Query: 304 AKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEE 363
+S +L IL + AG ET +S + + LL + + + + +
Sbjct: 237 QPLSLPELKDQILLLLFAGHETLTSALS-SFCLLLGQHSDIRERVRQEQNKLQLSQELTA 295
Query: 364 DDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPE 423
+ + +PYL V++E LRL PP+ R ++D FQG+H PK V DP+
Sbjct: 296 ETLKKMPYLDQVLQEVLRLIPPVGGGF-RELIQDCQFQGFHFPKGWLVSYQISQTHADPD 354
Query: 424 VWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDW 483
++ +P F PERF + +PFG G R C G A + L L+ QFDW
Sbjct: 355 LYPDPEKFDPERFTPDGSATHNPPFAHVPFGGGLRECLGKEFARLEMKLFATRLIQQFDW 414
Query: 484 ELDCKEEIDM 493
L + +++
Sbjct: 415 TLLPGQNLEL 424
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 94/206 (45%), Gaps = 6/206 (2%)
Query: 281 SDEKRKDFLDVMLDFEGNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTN 340
S EK D L +LD KD +++ ++ ++ + LAG T+S+T W L +
Sbjct: 226 SQEKIDDILQTLLD--ATYKDG-RPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARD 282
Query: 341 PESLNKAKAELAQAVGAD-RTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTN 399
K E G + D + +L L IKETLRL PPI ++ R A
Sbjct: 283 KTLQKKCYLEQKTVCGENLPPLTYDQLKDLNLLDRCIKETLRLRPPIMIMM-RMARTPQT 341
Query: 400 FQGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRM 459
GY IP QV V+ R + W E F P+R+L G+ + +PFGAGR
Sbjct: 342 VAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQDN-PASGEKFAYVPFGAGRHR 400
Query: 460 CAGVPLAHRMLHLILGSLLHQFDWEL 485
C G A+ + I ++L ++++L
Sbjct: 401 CIGENFAYVQIKTIWSTMLRLYEFDL 426
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 79/159 (49%), Gaps = 3/159 (1%)
Query: 304 AKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEE 363
A++S + + +E+ +TT+ + L EL NP+ + E A + +
Sbjct: 271 AELSLEAIKANSMELTAGSVDTTAFPLLMTLFELARNPDVQQILRQESLAAAASISEHPQ 330
Query: 364 DDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPE 423
LP L+A +KETLRL+ P+ + R D Q YHIP T V V +++GR+
Sbjct: 331 KATTELPLLRAALKETLRLY-PVGLFLERVVSSDLVLQNYHIPAGTLVQVFLYSLGRNAA 389
Query: 424 VWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAG 462
++ P + P+R+L + G+N+ +PFG G R C G
Sbjct: 390 LFPRPERYNPQRWLD--IRGSGRNFHHVPFGFGMRQCLG 426
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 80/178 (44%), Gaps = 21/178 (11%)
Query: 302 EPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTF 361
E +S+KD+ IL + LA +E T+ + LL NPE +N V ADR+
Sbjct: 250 EGMALSDKDILALILNVLLAATEPADKTLALMIYHLLNNPEQMND--------VLADRSL 301
Query: 362 EEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRD 421
+ I ETLR PP+ L+PR+ +DT G I KDT V A RD
Sbjct: 302 ----------VPRAIAETLRYKPPVQ-LIPRQLSQDTVVGGMEIKKDTIVFCMIGAANRD 350
Query: 422 PEVWDEPWSFKPERF-LGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLL 478
PE +++P F R LG + G L FG+G C G A + ++ +L
Sbjct: 351 PEAFEQPDVFNIHREDLGIKSAFSGAARHL-AFGSGIHNCVGTAFAKNEIEIVANIVL 407
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 115/232 (49%), Gaps = 19/232 (8%)
Query: 250 KMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVSEK 309
K +D+ A+E+ + R+ ++K E+ DF ++ E G ++ +
Sbjct: 246 KSVKDLKDAIEVLIAEKRRRISTEEKL------EECMDFATELILAEKRGD-----LTRE 294
Query: 310 DLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDDIDNL 369
++N ILE+ +A +T S ++ + L + +P ++ +A + Q V +R + DDI L
Sbjct: 295 NVNQCILEMLIAAPDTMSVSLFFMLFLIAKHP-NVEEAIIKEIQTVIGERDIKIDDIQKL 353
Query: 370 PYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPW 429
++ I E++R P + LV R+A+ED GY + K T +++N + R E + +P
Sbjct: 354 KVMENFIYESMRYQPVVD-LVMRKALEDDVIDGYPVKKGTNIILNIGRMHR-LEFFPKPN 411
Query: 430 SFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQF 481
F E F V Y+ PFG G R CAG +A M+ IL +LL +F
Sbjct: 412 EFTLENF-AKNVPYR----YFQPFGFGPRGCAGKYIAMVMMKAILVTLLRRF 458
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 93/432 (21%), Positives = 174/432 (40%), Gaps = 34/432 (7%)
Query: 60 NMFDLGTVPHRTLTELRQKYGDVIWLKFGAINTMVILSAKAATDFFKNHDSTFAERKVTE 119
++ G P + + ++KYG + + V+ + FF + + R+V
Sbjct: 17 HIIQFGKDPLGFMLKAKKKYGGIFTMNICGNRITVVGDVHQHSKFFTPRNEILSPREVYS 76
Query: 120 TMRVHGYDKSSLALAPYGAFWRVLRRLVTVEMLVTKRINETASVRRKCVNDMLLWIEQEA 179
M V + + APY L L E+ V K N S++ + M ++
Sbjct: 77 FM-VPVFGEGVAYAAPYPRMREQLNFLAE-ELTVAKFQNFAPSIQHEVRKFMKANWNKDE 134
Query: 180 SGVHVARLVFLSTFNLLGNLMLSRDLLDRESNDGAEFFQAMMGLMEWSGHANLADFFP-I 238
+++ N + DL R+ D +F Q ++ ME S A F P I
Sbjct: 135 GEINILDDCSAMIINTACQCLFGEDL--RKRLDARQFAQ-LLAKME-SCLIPAAVFLPWI 190
Query: 239 LRRLDPQGLRRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFEGN 298
L+ PQ R + R + +I S+ + R +++ + T TSD ++ G
Sbjct: 191 LKLPLPQSYRCRDAR--AELQDILSEIIIAREKEEAQKDTNTSD--------LLAGLLGA 240
Query: 299 GKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLT--NPESLNKAKAELAQ--- 353
+ ++S+ ++ I+ AG T++ T W+L L+ N L K E+ +
Sbjct: 241 VYRDGTRMSQHEVCGMIVAAMFAGQHTSTITTTWSLLHLMDPRNKRHLAKLHQEIDEFPA 300
Query: 354 AVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLV 413
+ D EE +P+ + +E++R PP+ L+ R+ ++ Y +P+ +
Sbjct: 301 QLNYDNVMEE-----MPFAEQCARESIRRDPPLVMLM-RKVLKPVQVGKYVVPEGDIIAC 354
Query: 414 NAWAIGRDPEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLI 473
+ +D E + P + PER + K + FGAG C G + +
Sbjct: 355 SPLLSHQDEEAFPNPREWNPER------NMKLVDGAFCGFGAGVHKCIGEKFGLLQVKTV 408
Query: 474 LGSLLHQFDWEL 485
L ++L +D+EL
Sbjct: 409 LATVLRDYDFEL 420
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 85/192 (44%), Gaps = 24/192 (12%)
Query: 316 LEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAV----------GADRTFEEDD 365
L + A T W+L +++ NPE++ A E+ + + G + +
Sbjct: 263 LVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAE 322
Query: 366 IDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQ----GYHIPKDTQVLVNAWAIGRD 421
+++LP L ++IKE+LRL L R A ED Y+I KD + + + D
Sbjct: 323 LNDLPVLDSIIKESLRLSSAS--LNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLD 380
Query: 422 PEVWDEPWSFKPERFLGSTVDYKGQ--------NYELIPFGAGRRMCAGVPLAHRMLHLI 473
PE++ +P +FK +R+L K Y +PFG+G +C G A +
Sbjct: 381 PEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQF 440
Query: 474 LGSLLHQFDWEL 485
L +L F+ EL
Sbjct: 441 LILMLSYFELEL 452
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 85/192 (44%), Gaps = 24/192 (12%)
Query: 316 LEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAV----------GADRTFEEDD 365
L + A T W+L +++ NPE++ A E+ + + G + +
Sbjct: 263 LVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAE 322
Query: 366 IDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQ----GYHIPKDTQVLVNAWAIGRD 421
+++LP L ++IKE+LRL L R A ED Y+I KD + + + D
Sbjct: 323 LNDLPVLDSIIKESLRLSSAS--LNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLD 380
Query: 422 PEVWDEPWSFKPERFLGSTVDYKGQ--------NYELIPFGAGRRMCAGVPLAHRMLHLI 473
PE++ +P +FK +R+L K Y +PFG+G +C G A +
Sbjct: 381 PEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQF 440
Query: 474 LGSLLHQFDWEL 485
L +L F+ EL
Sbjct: 441 LILMLSYFELEL 452
>pdb|2RFB|A Chain A, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|B Chain B, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|C Chain C, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFC|A Chain A, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|B Chain B, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|C Chain C, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|D Chain D, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
Length = 343
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 81/185 (43%), Gaps = 33/185 (17%)
Query: 314 FILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDDIDNLPYLK 373
+I+ + + G+ETT++ I + + NP+ ++ A L
Sbjct: 181 YIMLLIIGGNETTTNLIGNMIRVIDENPDIIDDA---------------------LKNRS 219
Query: 374 AVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKP 433
++ETLR + PI FL R A ED+ I K QV+V + RD +DEP FK
Sbjct: 220 GFVEETLRYYSPIQFLPHRFAAEDSYINNKKIKKGDQVIVYLGSANRDETFFDEPDLFKI 279
Query: 434 ERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFD-WELDCKEEID 492
G+ + FG G MC G PLA + L +L+ F ++D K+
Sbjct: 280 -----------GRREMHLAFGIGIHMCLGAPLARLEASIALNDILNHFKRIKIDYKKSRL 328
Query: 493 MNDRM 497
++++M
Sbjct: 329 LDNKM 333
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 18/176 (10%)
Query: 315 ILEIFLAGSETTSSTIEWALTELL-----TNPESLNKAKAELAQAVGADRTFEEDDIDNL 369
I+ AG T+S T W++ L+ + E+L K E + + +D +
Sbjct: 258 IVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNV-----MDEM 312
Query: 370 PYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPW 429
P+ + +E++R PP+ L+ R+ M D Y +PK + + D E + EP
Sbjct: 313 PFAERCARESIRRDPPLLMLM-RKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPR 371
Query: 430 SFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDWEL 485
+ PER D K + I FGAG C G + IL + +D++L
Sbjct: 372 RWDPER------DEKVEG-AFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQL 420
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 18/176 (10%)
Query: 315 ILEIFLAGSETTSSTIEWALTELL-----TNPESLNKAKAELAQAVGADRTFEEDDIDNL 369
I+ AG T+S T W++ L+ + E+L K E + + +D +
Sbjct: 257 IVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNV-----MDEM 311
Query: 370 PYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPW 429
P+ + +E++R PP+ L+ R+ M D Y +PK + + D E + EP
Sbjct: 312 PFAERCARESIRRDPPLLMLM-RKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPR 370
Query: 430 SFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDWEL 485
+ PER D K + I FGAG C G + IL + +D++L
Sbjct: 371 RWDPER------DEKVEG-AFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQL 419
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 18/176 (10%)
Query: 315 ILEIFLAGSETTSSTIEWALTELL-----TNPESLNKAKAELAQAVGADRTFEEDDIDNL 369
I+ AG T+S T W++ L+ + E+L K E + + +D +
Sbjct: 258 IVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNV-----MDEM 312
Query: 370 PYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPW 429
P+ + +E++R PP+ L+ R+ M D Y +PK + + D E + EP
Sbjct: 313 PFAERCARESIRRDPPLLMLM-RKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPR 371
Query: 430 SFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDWEL 485
+ PER D K + I FGAG C G + IL + +D++L
Sbjct: 372 RWDPER------DEKVEG-AFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQL 420
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 18/176 (10%)
Query: 315 ILEIFLAGSETTSSTIEWALTELL-----TNPESLNKAKAELAQAVGADRTFEEDDIDNL 369
I+ AG T+S T W++ L+ + E+L K E + + +D +
Sbjct: 271 IVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNV-----MDEM 325
Query: 370 PYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPW 429
P+ + +E++R PP+ L+ R+ M D Y +PK + + D E + EP
Sbjct: 326 PFAERCARESIRRDPPLLMLM-RKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPR 384
Query: 430 SFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDWEL 485
+ PER D K + I FGAG C G + IL + +D++L
Sbjct: 385 RWDPER------DEKVEG-AFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQL 433
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 18/176 (10%)
Query: 315 ILEIFLAGSETTSSTIEWALTELL-----TNPESLNKAKAELAQAVGADRTFEEDDIDNL 369
I+ AG T+S T W++ L+ + E+L K E + + +D +
Sbjct: 271 IVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNV-----MDEM 325
Query: 370 PYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPW 429
P+ + +E++R PP+ L+ R+ M D Y +PK + + D E + EP
Sbjct: 326 PFAERCARESIRRDPPLLMLM-RKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPR 384
Query: 430 SFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDWEL 485
+ PER D K + I FGAG C G + IL + +D++L
Sbjct: 385 RWDPER------DEKVEG-AFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQL 433
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 18/176 (10%)
Query: 315 ILEIFLAGSETTSSTIEWALTELL-----TNPESLNKAKAELAQAVGADRTFEEDDIDNL 369
I+ AG T+S T W++ L+ + E+L K E + + +D +
Sbjct: 259 IVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNV-----MDEM 313
Query: 370 PYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPW 429
P+ + +E++R PP+ L+ R+ M D Y +PK + + D E + EP
Sbjct: 314 PFAERCARESIRRDPPLLMLM-RKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPR 372
Query: 430 SFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDWEL 485
+ PER D K + I FGAG C G + IL + +D++L
Sbjct: 373 RWDPER------DEKVEG-AFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQL 421
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 86/407 (21%), Positives = 163/407 (40%), Gaps = 29/407 (7%)
Query: 82 VIWLKFGAINTMVILSAKAATDFFKNHDSTFAERKVTETMRVHGYDKSSLALAPYGAFWR 141
V + G ++ + FF + + R+V T+ + + APY
Sbjct: 53 VFTISIGGQRVTIVGDPHEHSRFFSPRNEILSPREVY-TIMTPVFGEGVAYAAPYPRMRE 111
Query: 142 VLRRLVTVEMLVTKRINETASVRRKCVNDMLLWIEQEASGVHVARLVFLSTFNLLGNLML 201
L L E+ + K N +++ + M +++ +++ N +
Sbjct: 112 QLNFLAE-ELTIAKFQNFVPAIQHEVRKFMAENWKEDEGVINLLEDCGAMIINTACQCLF 170
Query: 202 SRDLLDRESNDGAEFFQAMMGLMEWSGHANLADFFPILRRLD-PQGLRRKMERDVGKALE 260
DL R + A F ++ ME S A F P L RL PQ R + R + +
Sbjct: 171 GEDLRKRLN---ARHFAQLLSKME-SSLIPAAVFMPWLLRLPLPQSARCREAR--AELQK 224
Query: 261 IASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVSEKDLNIFILEIFL 320
I + + R +++ + D D L +L + +D ++S ++ I+
Sbjct: 225 ILGEIIVAREKEE-----ASKDNNTSDLLGGLL--KAVYRDG-TRMSLHEVCGMIVAAMF 276
Query: 321 AGSETTSSTIEWALTELL--TNPESLNKAKAELAQAVGADRTFEEDDIDNLPYLKAVIKE 378
AG T++ T W++ L+ N + L+K E+ + A ++ + +D +P+ + ++E
Sbjct: 277 AGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDE-FPAQLNYD-NVMDEMPFAERCVRE 334
Query: 379 TLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPERFLG 438
++R PP+ +V R + Y +PK + + D E + P + PER
Sbjct: 335 SIRRDPPL-LMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER--D 391
Query: 439 STVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDWEL 485
VD I FGAG C G A + IL + ++D++L
Sbjct: 392 EKVDGA-----FIGFGAGVHKCIGQKFALLQVKTILATAFREYDFQL 433
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 86/407 (21%), Positives = 163/407 (40%), Gaps = 29/407 (7%)
Query: 82 VIWLKFGAINTMVILSAKAATDFFKNHDSTFAERKVTETMRVHGYDKSSLALAPYGAFWR 141
V + G ++ + FF + + R+V T+ + + APY
Sbjct: 38 VFTISIGGQRVTIVGDPHEHSRFFSPRNEILSPREVY-TIMTPVFGEGVAYAAPYPRMRE 96
Query: 142 VLRRLVTVEMLVTKRINETASVRRKCVNDMLLWIEQEASGVHVARLVFLSTFNLLGNLML 201
L L E+ + K N +++ + M +++ +++ N +
Sbjct: 97 QLNFLAE-ELTIAKFQNFVPAIQHEVRKFMAENWKEDEGVINLLEDCGAMIINTACQCLF 155
Query: 202 SRDLLDRESNDGAEFFQAMMGLMEWSGHANLADFFPILRRLD-PQGLRRKMERDVGKALE 260
DL R + A F ++ ME S A F P L RL PQ R + R + +
Sbjct: 156 GEDLRKRLN---ARHFAQLLSKME-SSLIPAAVFMPWLLRLPLPQSARCREAR--AELQK 209
Query: 261 IASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVSEKDLNIFILEIFL 320
I + + R +++ + D D L +L + +D ++S ++ I+
Sbjct: 210 ILGEIIVAREKEE-----ASKDNNTSDLLGGLL--KAVYRDG-TRMSLHEVCGMIVAAMF 261
Query: 321 AGSETTSSTIEWALTELL--TNPESLNKAKAELAQAVGADRTFEEDDIDNLPYLKAVIKE 378
AG T++ T W++ L+ N + L+K E+ + A ++ + +D +P+ + ++E
Sbjct: 262 AGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDE-FPAQLNYD-NVMDEMPFAERCVRE 319
Query: 379 TLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPERFLG 438
++R PP+ +V R + Y +PK + + D E + P + PER
Sbjct: 320 SIRRDPPL-LMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER--D 376
Query: 439 STVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDWEL 485
VD I FGAG C G A + IL + ++D++L
Sbjct: 377 EKVDGA-----FIGFGAGVHKCIGQKFALLQVKTILATAFREYDFQL 418
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 86/407 (21%), Positives = 163/407 (40%), Gaps = 29/407 (7%)
Query: 82 VIWLKFGAINTMVILSAKAATDFFKNHDSTFAERKVTETMRVHGYDKSSLALAPYGAFWR 141
V + G ++ + FF + + R+V T+ + + APY
Sbjct: 44 VFTISIGGQRVTIVGDPHEHSRFFSPRNEILSPREVY-TIMTPVFGEGVAYAAPYPRMRE 102
Query: 142 VLRRLVTVEMLVTKRINETASVRRKCVNDMLLWIEQEASGVHVARLVFLSTFNLLGNLML 201
L L E+ + K N +++ + M +++ +++ N +
Sbjct: 103 QLNFLAE-ELTIAKFQNFVPAIQHEVRKFMAENWKEDEGVINLLEDCGAMIINTACQCLF 161
Query: 202 SRDLLDRESNDGAEFFQAMMGLMEWSGHANLADFFPILRRLD-PQGLRRKMERDVGKALE 260
DL R + A F ++ ME S A F P L RL PQ R + R + +
Sbjct: 162 GEDLRKRLN---ARHFAQLLSKME-SSLIPAAVFMPWLLRLPLPQSARCREAR--AELQK 215
Query: 261 IASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVSEKDLNIFILEIFL 320
I + + R +++ + D D L +L + +D ++S ++ I+
Sbjct: 216 ILGEIIVAREKEE-----ASKDNNTSDLLGGLL--KAVYRDG-TRMSLHEVCGMIVAAMF 267
Query: 321 AGSETTSSTIEWALTELL--TNPESLNKAKAELAQAVGADRTFEEDDIDNLPYLKAVIKE 378
AG T++ T W++ L+ N + L+K E+ + A ++ + +D +P+ + ++E
Sbjct: 268 AGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDE-FPAQLNYD-NVMDEMPFAERCVRE 325
Query: 379 TLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPERFLG 438
++R PP+ +V R + Y +PK + + D E + P + PER
Sbjct: 326 SIRRDPPL-LMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER--D 382
Query: 439 STVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDWEL 485
VD I FGAG C G A + IL + ++D++L
Sbjct: 383 EKVDGA-----FIGFGAGVHKCIGQKFALLQVKTILATAFREYDFQL 424
>pdb|1PKF|A Chain A, Crystal Structure Of Epothilone D-Bound Cytochrome
P450epok
Length = 419
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 91/216 (42%), Gaps = 38/216 (17%)
Query: 279 GTSDEKRK-----DFLDVMLDFEGNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWA 333
G DE+R+ D L ++L E +G +++S K+L + I AG++TT I +A
Sbjct: 211 GVLDERRRNPLENDVLTMLLQAEADG----SRLSTKELVALVGAIIAAGTDTTIYLIAFA 266
Query: 334 LTELLTNPESLNKAKAELAQAVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRR 393
+ LL +PE+L KAE ++ + E LR + R
Sbjct: 267 VLNLLRSPEALELVKAEPG------------------LMRNALDEVLRFENILRIGTVRF 308
Query: 394 AMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPERFLGSTVDYKGQNYELIPF 453
A +D + G I K V + + RD V+ P F R +++ Y
Sbjct: 309 ARQDLEYCGASIKKGEMVFLLIPSALRDGTVFSRPDVFDVRRDTSASLAY---------- 358
Query: 454 GAGRRMCAGVPLAHRMLHLILGSLLHQFDWELDCKE 489
G G +C GV LA + +G++ +F E+ KE
Sbjct: 359 GRGPHVCPGVSLARLEAEIAVGTIFRRFP-EMKLKE 393
>pdb|1Q5D|A Chain A, Epothilone B-Bound Cytochrome P450epok
pdb|1Q5E|A Chain A, Substrate-Free Cytochrome P450epok
Length = 419
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 91/216 (42%), Gaps = 38/216 (17%)
Query: 279 GTSDEKRK-----DFLDVMLDFEGNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWA 333
G DE+R+ D L ++L E +G +++S K+L + I AG++TT I +A
Sbjct: 211 GVLDERRRNPLENDVLTMLLQAEADG----SRLSTKELVALVGAIIAAGTDTTIYLIAFA 266
Query: 334 LTELLTNPESLNKAKAELAQAVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRR 393
+ LL +PE+L KAE ++ + E LR + R
Sbjct: 267 VLNLLRSPEALELVKAEPG------------------LMRNALDEVLRFDNILRIGTVRF 308
Query: 394 AMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPERFLGSTVDYKGQNYELIPF 453
A +D + G I K V + + RD V+ P F R +++ Y
Sbjct: 309 ARQDLEYCGASIKKGEMVFLLIPSALRDGTVFSRPDVFDVRRDTSASLAY---------- 358
Query: 454 GAGRRMCAGVPLAHRMLHLILGSLLHQFDWELDCKE 489
G G +C GV LA + +G++ +F E+ KE
Sbjct: 359 GRGPHVCPGVSLARLEAEIAVGTIFRRFP-EMKLKE 393
>pdb|1CPT|A Chain A, Crystal Structure And Refinement Of Cytochrome P450-Terp
At 2.3 Angstroms Resolution
Length = 428
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 87/205 (42%), Gaps = 37/205 (18%)
Query: 278 TGTSDEKRKDFLDVMLDFEGNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTEL 337
G + ++R D ++ N K + + +K +N + + I AG +TTSS+ A+ L
Sbjct: 224 NGFTVDRRSCPKDDVMSLLANSKLDGNYIDDKYINAYYVAIATAGHDTTSSSSGGAIIGL 283
Query: 338 LTNPESLNKAKAELAQAVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMED 397
NPE L AK++ A + ++ E +R P+ + R A+ D
Sbjct: 284 SRNPEQLALAKSDPA------------------LIPRLVDEAVRWTAPVKSFM-RTALAD 324
Query: 398 TNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFK----PERFLGSTVDYKGQNYELIPF 453
T +G +I + +++++ + RD EV+ P F P R LG F
Sbjct: 325 TEVRGQNIKRGDRIMLSYPSANRDEEVFSNPDEFDITRFPNRHLG--------------F 370
Query: 454 GAGRRMCAGVPLAHRMLHLILGSLL 478
G G MC G LA + + LL
Sbjct: 371 GWGAHMCLGQHLAKLEMKIFFEELL 395
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 88/204 (43%), Gaps = 37/204 (18%)
Query: 282 DEKRK----DFLDVMLDFEGNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTEL 337
DE+R+ D + ++ E +G +++E ++ + +AG ETT + I A +
Sbjct: 217 DERRRTPGEDLMSGLVAVEESGD----QLTEDEIIATCNLLLIAGHETTVNLIANAALAM 272
Query: 338 LTNPESLNKAKAELAQAVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMED 397
L P A+ ++A AVI+ET+R PP+ LV R A +D
Sbjct: 273 LRTPGQWAALAADGSRA------------------SAVIEETMRYDPPV-QLVSRYAGDD 313
Query: 398 TNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGR 457
+ +PK +L+ A RDP + P F P+R + + + G FG G
Sbjct: 314 LTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDPDR---AQIRHLG-------FGKGA 363
Query: 458 RMCAGVPLAHRMLHLILGSLLHQF 481
C G PLA + L +L +F
Sbjct: 364 HFCLGAPLARLEATVALPALAARF 387
>pdb|1EGY|A Chain A, Cytochrome P450eryf With 9-Aminophenanthrene Bound
pdb|1EUP|A Chain A, X-Ray Crystal Structure Of Cytochrome P450eryf With
Androstendione Bound
pdb|1JIN|A Chain A, P450eryfKETOCONAZOLE
pdb|1OXA|A Chain A, Cytochrome P450 (Donor:o2 Oxidoreductase)
Length = 403
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 80/199 (40%), Gaps = 32/199 (16%)
Query: 283 EKRKDFLDVMLDFEGNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPE 342
E D L ++ + D+ ++S +L L + LAG E + S I LLT+P+
Sbjct: 205 EPGDDLLSALISVQ---DDDDGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHPD 261
Query: 343 SLNKAKAELAQAVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQG 402
L +A+ + L ++E LR P P R A E+ G
Sbjct: 262 QLALVRADPSA------------------LPNAVEEILRYIAP-PETTTRFAAEEVEIGG 302
Query: 403 YHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAG 462
IP+ + VLV A RDP + +P F R D +G + FG G C G
Sbjct: 303 VAIPQYSTVLVANGAANRDPSQFPDPHRFDVTR------DTRGH----LSFGQGIHFCMG 352
Query: 463 VPLAHRMLHLILGSLLHQF 481
PLA + L +L +F
Sbjct: 353 RPLAKLEGEVALRALFGRF 371
>pdb|1Z8Q|A Chain A, Ferrous Dioxygen Complex Of The A245t Cytochrome P450eryf
Length = 404
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 75/181 (41%), Gaps = 29/181 (16%)
Query: 301 DEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRT 360
D+ ++S +L L + LAG ET+ S I LLT+P+ L + + +
Sbjct: 221 DDDGRLSADELTSIALVLLLAGFETSVSLIGIGTYLLLTHPDQLALVRRDPSA------- 273
Query: 361 FEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGR 420
L ++E LR P P R A E+ G IP+ + VLV A R
Sbjct: 274 -----------LPNAVEEILRYIAP-PETTTRFAAEEVEIGGVAIPQYSTVLVANGAANR 321
Query: 421 DPEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQ 480
DP+ + +P F R D +G + FG G C G PLA + L +L +
Sbjct: 322 DPKQFPDPHRFDVTR------DTRGH----LSFGQGIHFCMGRPLAKLEGEVALRALFGR 371
Query: 481 F 481
F
Sbjct: 372 F 372
>pdb|1Z8P|A Chain A, Ferrous Dioxygen Complex Of The A245s Cytochrome P450eryf
Length = 404
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 75/181 (41%), Gaps = 29/181 (16%)
Query: 301 DEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRT 360
D+ ++S +L L + LAG E++ S I LLT+P+ L + + +
Sbjct: 221 DDDGRLSADELTSIALVLLLAGFESSVSLIGIGTYLLLTHPDQLALVRRDPSA------- 273
Query: 361 FEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGR 420
L ++E LR P P R A E+ G IP+ + VLV A R
Sbjct: 274 -----------LPNAVEEILRYIAP-PETTTRFAAEEVEIGGVAIPQYSTVLVANGAANR 321
Query: 421 DPEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQ 480
DP+ + +P F R D +G + FG G C G PLA + L +L +
Sbjct: 322 DPKQFPDPHRFDVTR------DTRGH----LSFGQGIHFCMGRPLAKLEGEVALRALFGR 371
Query: 481 F 481
F
Sbjct: 372 F 372
>pdb|1JIP|A Chain A, P450eryf(A245s)KETOCONAZOLE
Length = 403
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 75/181 (41%), Gaps = 29/181 (16%)
Query: 301 DEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRT 360
D+ ++S +L L + LAG E++ S I LLT+P+ L + + +
Sbjct: 220 DDDGRLSADELTSIALVLLLAGFESSVSLIGIGTYLLLTHPDQLALVRRDPSA------- 272
Query: 361 FEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGR 420
L ++E LR P P R A E+ G IP+ + VLV A R
Sbjct: 273 -----------LPNAVEEILRYIAP-PETTTRFAAEEVEIGGVAIPQYSTVLVANGAANR 320
Query: 421 DPEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQ 480
DP+ + +P F R D +G + FG G C G PLA + L +L +
Sbjct: 321 DPKQFPDPHRFDVTR------DTRGH----LSFGQGIHFCMGRPLAKLEGEVALRALFGR 370
Query: 481 F 481
F
Sbjct: 371 F 371
>pdb|3B98|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B98|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B99|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
pdb|3B99|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
Length = 475
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 19/168 (11%)
Query: 332 WALTELLTNPESLNKAKAELAQAVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVP 391
W + LLT+PE+L + E+ G E+ N P +V+ ETLRL L+
Sbjct: 275 WVMGYLLTHPEALRAVREEIQ---GGKHLRLEERQKNTPVFDSVLWETLRLTAAA--LIT 329
Query: 392 RRAMED-----TNFQGYHIPKDTQVLVNAWAIGR-DPEVWDEPWSFKPERFLGSTVDYKG 445
R +D +N Q YH+ + ++ V + + DP++ +P F+ +RFL + K
Sbjct: 330 RDVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQIHQQPEMFQFDRFLNADRTEKK 389
Query: 446 Q--------NYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDWEL 485
Y +P+G +C G A + ++ ++L +FD EL
Sbjct: 390 DFFKNGARVKYPSVPWGTEDNLCPGRHFAVHAIKELVFTILTRFDVEL 437
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 103/263 (39%), Gaps = 44/263 (16%)
Query: 245 QGLRRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPA 304
Q + K+E+ +G+ + +++R + ++T SD R F D +LD
Sbjct: 183 QDILVKVEQGLGRMFDYLVAAIEKRKVEPGDDLT--SDIVRA-FHDGVLD---------- 229
Query: 305 KVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEED 364
+ +L + + +AG ETT+ + A+ + +P+ K K
Sbjct: 230 ---DYELRTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMKIK---------------- 270
Query: 365 DIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEV 424
+N ++E LR P +P R A ED G IP T V + A RDP V
Sbjct: 271 --ENPELAPQAVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRV 328
Query: 425 WDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDWE 484
+ + +RF TV + + I FG G C G LA L + +L + D
Sbjct: 329 FAD-----ADRF-DITVKREAPS---IAFGGGPHFCLGTALARLELTEAVAALATRLD-P 378
Query: 485 LDCKEEIDMNDRMGITVRKAEPL 507
EI +G+ A PL
Sbjct: 379 PQIAGEITWRHELGVAGPDALPL 401
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 103/263 (39%), Gaps = 44/263 (16%)
Query: 245 QGLRRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPA 304
Q + K+E+ +G+ + +++R + ++T SD R F D +LD
Sbjct: 193 QDILVKVEQGLGRMFDYLVAAIEKRKVEPGDDLT--SDIVRA-FHDGVLD---------- 239
Query: 305 KVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEED 364
+ +L + + +AG ETT+ + A+ + +P+ K K
Sbjct: 240 ---DYELRTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMKIK---------------- 280
Query: 365 DIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEV 424
+N ++E LR P +P R A ED G IP T V + A RDP V
Sbjct: 281 --ENPELAPQAVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRV 338
Query: 425 WDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDWE 484
+ + +RF TV + + I FG G C G LA L + +L + D
Sbjct: 339 FAD-----ADRF-DITVKREAPS---IAFGGGPHFCLGTALARLELTEAVAALATRLD-P 388
Query: 485 LDCKEEIDMNDRMGITVRKAEPL 507
EI +G+ A PL
Sbjct: 389 PQIAGEITWRHELGVAGPDALPL 411
>pdb|1JIO|A Chain A, P450eryf/6deb
Length = 403
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 74/181 (40%), Gaps = 29/181 (16%)
Query: 301 DEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRT 360
D+ ++S +L L + LAG E + S I LLT+P+ L + + +
Sbjct: 220 DDDGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHPDQLALVRRDPSA------- 272
Query: 361 FEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGR 420
L ++E LR P P R A E+ G IP+ + VLV A R
Sbjct: 273 -----------LPNAVEEILRYIAP-PETTTRFAAEEVEIGGVAIPQYSTVLVANGAANR 320
Query: 421 DPEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQ 480
DP+ + +P F R D +G + FG G C G PLA + L +L +
Sbjct: 321 DPKQFPDPHRFDVTR------DTRGH----LSFGQGIHFCMGRPLAKLEGEVALRALFGR 370
Query: 481 F 481
F
Sbjct: 371 F 371
>pdb|1Z8O|A Chain A, Ferrous Dioxygen Complex Of The Wild-Type Cytochrome
P450eryf
Length = 404
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 74/181 (40%), Gaps = 29/181 (16%)
Query: 301 DEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRT 360
D+ ++S +L L + LAG E + S I LLT+P+ L + + +
Sbjct: 221 DDDGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHPDQLALVRRDPSA------- 273
Query: 361 FEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGR 420
L ++E LR P P R A E+ G IP+ + VLV A R
Sbjct: 274 -----------LPNAVEEILRYIAP-PETTTRFAAEEVEIGGVAIPQYSTVLVANGAANR 321
Query: 421 DPEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQ 480
DP+ + +P F R D +G + FG G C G PLA + L +L +
Sbjct: 322 DPKQFPDPHRFDVTR------DTRGH----LSFGQGIHFCMGRPLAKLEGEVALRALFGR 371
Query: 481 F 481
F
Sbjct: 372 F 372
>pdb|2JJN|A Chain A, Structure Of Closed Cytochrome P450 Eryk
pdb|2JJO|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With Its
Natural Substrate Erd
pdb|2JJP|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With
Inhibitor Ketoconazole (Kc)
pdb|2XFH|A Chain A, Structure Of Cytochrome P450 Eryk Cocrystallized With
Inhibitor Clotrimazole
Length = 411
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 49/112 (43%), Gaps = 13/112 (11%)
Query: 372 LKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIG--RDPEVWDEPW 429
+ A+++E LR PP P + R + T G IP D V+VN W + RD + D+P
Sbjct: 274 IPAIVEEVLRYRPPFPQMQ-RTTTKATEVAGVPIPAD--VMVNTWVLSANRDSDAHDDPD 330
Query: 430 SFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQF 481
F P R G FG G C G PLA + L ++ +F
Sbjct: 331 RFDPSRKSGGAAQLS--------FGHGVHFCLGAPLARLENRVALEEIIARF 374
>pdb|1ODO|A Chain A, 1.85 A Structure Of Cyp154a1 From Streptomyces Coelicolor
A3(2)
Length = 408
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 86/215 (40%), Gaps = 33/215 (15%)
Query: 268 ERLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVSEKDLNIFILEIFLAGSETTS 327
E L+Q T + L D EG+G ++S ++L +L + AG ETT
Sbjct: 193 EVLDQLIAAKRATPGDDMTSLLIAARDDEGDGD----RLSPEELRDTLLLMISAGYETTV 248
Query: 328 STIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIP 387
+ I+ A+ LLT P+ L A + AD V++ETLR P +
Sbjct: 249 NVIDQAVHTLLTRPDQL--ALVRKGEVTWAD----------------VVEETLRHEPAVK 290
Query: 388 FLVPRRAMEDTNF-QGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPERFLGSTVDYKGQ 446
L R A+ D G I + +L + A R P+ W E T D
Sbjct: 291 HLPLRYAVTDIALPDGRTIARGEPILASYAAANRHPD-WHED---------ADTFDATRT 340
Query: 447 NYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQF 481
E + FG G C G PLA + L L SL +F
Sbjct: 341 VKEHLAFGHGVHFCLGAPLARMEVTLALESLFGRF 375
>pdb|2VRV|A Chain A, Structure Of Histidine Tagged Cytochrome P450 Eryk In
Complex With Inhibitor Clotrimazole (Clt)
pdb|2WIO|A Chain A, Structure Of The Histidine Tagged, Open Cytochrome P450
Eryk From S. Erythraea
Length = 431
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 49/112 (43%), Gaps = 13/112 (11%)
Query: 372 LKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIG--RDPEVWDEPW 429
+ A+++E LR PP P + R + T G IP D V+VN W + RD + D+P
Sbjct: 294 IPAIVEEVLRYRPPFPQMQ-RTTTKATEVAGVPIPAD--VMVNTWVLSANRDSDAHDDPD 350
Query: 430 SFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQF 481
F P R G FG G C G PLA + L ++ +F
Sbjct: 351 RFDPSRKSGGAAQLS--------FGHGVHFCLGAPLARLENRVALEEIIARF 394
>pdb|4AW3|A Chain A, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
pdb|4AW3|B Chain B, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
Length = 417
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 90/223 (40%), Gaps = 29/223 (13%)
Query: 260 EIASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVSEKDLNIFILEIF 319
E+ ++ ++E EQ + D +RK+ D ++ +D+ +SE++L + +
Sbjct: 193 EVTAEEMQEAAEQAYAYMGDLIDRRRKEPTDDLVSALVQARDQQDSLSEQELLDLAIGLL 252
Query: 320 LAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDDIDNLPYLKAVIKET 379
+AG E+T++ I + L+T PE +D + + ++E
Sbjct: 253 VAGYESTTTQIADFVYLLMTRPE------------------LRRQLLDRPELIPSAVEEL 294
Query: 380 LRLHP-PIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPERFLG 438
R P + VPR A+ED +G I VL + A RD + +
Sbjct: 295 TRWVPLGVGTAVPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPD----------A 344
Query: 439 STVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQF 481
+D + + FG G C G PLA L + L LL +
Sbjct: 345 DRIDVDRTPNQHLGFGHGVHHCLGAPLARVELQVALEVLLQRL 387
>pdb|3B6H|A Chain A, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
pdb|3B6H|B Chain B, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
Length = 498
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 28/209 (13%)
Query: 332 WALTELLTNPESLNKAKAELA-------QAVGADRTFEEDDIDNLPYLKAVIKETLRLHP 384
W L LL NPE+L + EL Q V T + +D+ P L +V+ E+LRL
Sbjct: 284 WLLLFLLKNPEALAAVRGELESILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRL-T 342
Query: 385 PIPFL----VPRRAMEDTNFQGYHIPKDTQVLVNAW-AIGRDPEVWDEPWSFKPERFLGS 439
PF+ V AM + + +++ + ++L+ + + RDPE++ +P FK RFL
Sbjct: 343 AAPFITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRFLNP 402
Query: 440 TVDYKG---------QNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDWELDCKE- 489
K +NY + P+GAG C G A + + +L D EL +
Sbjct: 403 DGSEKKDFYKDGKRLKNYNM-PWGAGHNHCLGRSYAVNSIKQFVFLVLVHLDLELINADV 461
Query: 490 ---EIDMNDRMGITVRKAEPLIAVPKRCK 515
E D++ R G + + E + V R +
Sbjct: 462 EIPEFDLS-RYGFGLMQPEHDVPVRYRIR 489
>pdb|2IAG|A Chain A, Crystal Structure Of Human Prostacyclin Synthase
pdb|2IAG|B Chain B, Crystal Structure Of Human Prostacyclin Synthase
Length = 482
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 28/209 (13%)
Query: 332 WALTELLTNPESLNKAKAELA-------QAVGADRTFEEDDIDNLPYLKAVIKETLRLHP 384
W L LL NPE+L + EL Q V T + +D+ P L +V+ E+LRL
Sbjct: 272 WLLLFLLKNPEALAAVRGELESILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRL-T 330
Query: 385 PIPFL----VPRRAMEDTNFQGYHIPKDTQVLVNAW-AIGRDPEVWDEPWSFKPERFLGS 439
PF+ V AM + + +++ + ++L+ + + RDPE++ +P FK RFL
Sbjct: 331 AAPFITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRFLNP 390
Query: 440 TVDYKG---------QNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDWELDCKE- 489
K +NY + P+GAG C G A + + +L D EL +
Sbjct: 391 DGSEKKDFYKDGKRLKNYNM-PWGAGHNHCLGRSYAVNSIKQFVFLVLVHLDLELINADV 449
Query: 490 ---EIDMNDRMGITVRKAEPLIAVPKRCK 515
E D++ R G + + E + V R +
Sbjct: 450 EIPEFDLS-RYGFGLMQPEHDVPVRYRIR 477
>pdb|3TKT|A Chain A, Crystal Structure Of Cyp108d1 From Novosphingobium
Aromaticivorans Dsm12444
Length = 450
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 92/223 (41%), Gaps = 29/223 (13%)
Query: 260 EIASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVSEKDLNIFILEIF 319
E S+ V + + ++ G + E+R++ D + N + +S++D + +
Sbjct: 228 EQISQIVAGAVAEFERYFAGLAAERRRNPTDDVATVIANAVVDGEPMSDRDTAGYYIITA 287
Query: 320 LAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDDIDNLPYLKAVIKET 379
AG +TTS++ A L +P+ + K ADR L +++E
Sbjct: 288 SAGHDTTSASSAGAALALARDPDLFARVK--------ADRNL----------LPGIVEEA 329
Query: 380 LRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPERFLGS 439
+R P+ + R A DT G I +++N A DP + EP F P R
Sbjct: 330 IRWTTPVQHFM-RTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRKFDPTR---- 384
Query: 440 TVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFD 482
N L FGAG C G+ LA + ++L LL + D
Sbjct: 385 -----PANRHLA-FGAGSHQCLGLHLARLEMRVLLDVLLDRVD 421
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 9/114 (7%)
Query: 376 IKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPER 435
++E R +P PFL +D + K T VL++ + DP +WD P F+PER
Sbjct: 280 VQEVRRYYPFGPFLGAL-VKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFRPER 338
Query: 436 FLGSTVDYKGQNYELIPFGAGR----RMCAGVPLAHRMLHLILGSLLHQFDWEL 485
F + + +++IP G G C G + ++ L L+HQ ++++
Sbjct: 339 F----AEREENLFDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEYDV 388
>pdb|3ZSN|A Chain A, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|B Chain B, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|C Chain C, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
Length = 417
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 89/223 (39%), Gaps = 29/223 (13%)
Query: 260 EIASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVSEKDLNIFILEIF 319
E+ ++ ++E EQ + D +RK+ D ++ +D+ +SE++L + +
Sbjct: 193 EVTAEEMQEAAEQAYAYMGDLIDRRRKEPTDDLVSALVQARDQQDSLSEQELLDLAIGLL 252
Query: 320 LAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDDIDNLPYLKAVIKET 379
+AG E+T++ I + L+T PE +D + + ++E
Sbjct: 253 VAGYESTTTQIADFVYLLMTRPE------------------LRRQLLDRPELIPSAVEEL 294
Query: 380 LRLHP-PIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPERFLG 438
R P + PR A+ED +G I VL + A RD + +
Sbjct: 295 TRWVPLGVGTAAPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPD----------A 344
Query: 439 STVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQF 481
+D + + FG G C G PLA L + L LL +
Sbjct: 345 DRIDVDRTPNQHLGFGHGVHHCLGAPLARVELQVALEVLLQRL 387
>pdb|2Y46|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|C Chain C, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y5N|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5N|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5Z|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|B Chain B, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|C Chain C, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y98|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In P21212 Space Group
pdb|2YGX|A Chain A, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|B Chain B, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|C Chain C, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|D Chain D, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YCA|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In P21212 Space Group
Length = 417
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 89/223 (39%), Gaps = 29/223 (13%)
Query: 260 EIASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVSEKDLNIFILEIF 319
E+ ++ ++E EQ + D +RK+ D ++ +D+ +SE++L + +
Sbjct: 193 EVTAEEMQEAAEQAYAYMGDLIDRRRKEPTDDLVSALVQARDQQDSLSEQELLDLAIGLL 252
Query: 320 LAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDDIDNLPYLKAVIKET 379
+AG E+T++ I + L+T PE +D + + ++E
Sbjct: 253 VAGYESTTTQIADFVYLLMTRPE------------------LRRQLLDRPELIPSAVEEL 294
Query: 380 LRLHP-PIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPERFLG 438
R P + PR A+ED +G I VL + A RD + +
Sbjct: 295 TRWVPLGVGTAFPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPD----------A 344
Query: 439 STVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQF 481
+D + + FG G C G PLA L + L LL +
Sbjct: 345 DRIDVDRTPNQHLGFGHGVHHCLGAPLARVELQVALEVLLQRL 387
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 371 YLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPWS 430
Y + ++E R +P P +V R A +D ++G P+ QV+++ + D W +P
Sbjct: 265 YAELFVQEVRRFYPFFPAVVAR-ASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 323
Query: 431 FKPERFLGSTVDYKGQNYELIPFGAG 456
F+PERF D ++ IP G G
Sbjct: 324 FRPERFRAWDED----SFNFIPQGGG 345
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 371 YLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPWS 430
Y + ++E R +P P +V R A +D ++G P+ QV+++ + D W +P
Sbjct: 265 YAELFVQEVRRFYPFFPAVVAR-ASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 323
Query: 431 FKPERFLGSTVDYKGQNYELIPFGAG 456
F+PERF D ++ IP G G
Sbjct: 324 FRPERFRAWDED----SFNFIPQGGG 345
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 371 YLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPWS 430
Y + ++E R +P P +V R A +D ++G P+ QV+++ + D W +P
Sbjct: 265 YAELFVQEVRRFYPFFPAVVAR-ASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 323
Query: 431 FKPERFLGSTVDYKGQNYELIPFGAG 456
F+PERF D ++ IP G G
Sbjct: 324 FRPERFRAWDED----SFNFIPQGGG 345
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 371 YLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPWS 430
Y + ++E R +P P +V R A +D ++G P+ QV+++ + D W +P
Sbjct: 273 YAELFVQEVRRFYPFFPAVVAR-ASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 331
Query: 431 FKPERFLGSTVDYKGQNYELIPFGAG 456
F+PERF D ++ IP G G
Sbjct: 332 FRPERFRAWDED----SFNFIPQGGG 353
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 371 YLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPWS 430
Y + ++E R +P P +V R A +D ++G P+ QV+++ + D W +P
Sbjct: 273 YAELFVQEVRRFYPFFPAVVAR-ASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 331
Query: 431 FKPERFLGSTVDYKGQNYELIPFGAG 456
F+PERF D ++ IP G G
Sbjct: 332 FRPERFRAWDED----SFNFIPQGGG 353
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 95/230 (41%), Gaps = 49/230 (21%)
Query: 262 ASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVSEKDLNIFILEIFLA 321
A + KE ++++ ++ ++D + ++L +G KD K++E++ + + +A
Sbjct: 187 AMAYFKELIQKRKRH-------PQQDMISMLL--KGREKD---KLTEEEAASTCILLAIA 234
Query: 322 GSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDDIDNLPYLKAVIKETLR 381
G ETT + I ++ LL +PE L K + +N + ++E LR
Sbjct: 235 GHETTVNLISNSVLCLLQHPEQLLKLR------------------ENPDLIGTAVEECLR 276
Query: 382 LHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPERFLGSTV 441
P + R A ED + G I + QV + A RDP ++ P F
Sbjct: 277 YESPTQ-MTARVASEDIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVF---------- 325
Query: 442 DYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQ--------FDW 483
D + FG G +C G LA + + +LL + F+W
Sbjct: 326 DITRSPNPHLSFGHGHHVCLGSSLARLEAQIAINTLLQRMPSLNLADFEW 375
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 371 YLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPWS 430
Y + ++E R +P P +V R A +D ++G P+ QV+++ + D W +P
Sbjct: 273 YAELFVQEVRRFYPFGPAVVAR-ASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 331
Query: 431 FKPERFLGSTVDYKGQNYELIPFGAG 456
F+PERF D ++ IP G G
Sbjct: 332 FRPERFRAWDED----SFNFIPQGGG 353
>pdb|2BVJ|A Chain A, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2BVJ|B Chain B, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2C6H|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C6H|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C7X|A Chain A, Crystal Structure Of Narbomycin-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
Length = 436
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 84/209 (40%), Gaps = 30/209 (14%)
Query: 282 DEKR-KDFLDVMLDFEGNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTN 340
D KR +D D++ ++ ++++ ++L + +AG ETT + I + LL++
Sbjct: 223 DSKRGQDGEDLLSALVRTSDEDGSRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSH 282
Query: 341 PESLNKAKAELAQAVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNF 400
P+ L +A++ L ++E LR P+ R +E +
Sbjct: 283 PDQLAALRADMT------------------LLDGAVEEMLRYEGPVESATYRFPVEPVDL 324
Query: 401 QGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMC 460
G IP VLV R PE + +P F R D G + FG G C
Sbjct: 325 DGTVIPAGDTVLVVLADAHRTPERFPDPHRFDIRR------DTAGH----LAFGHGIHFC 374
Query: 461 AGVPLAHRMLHLILGSLLHQF-DWELDCK 488
G PLA + + +LL + D LD
Sbjct: 375 IGAPLARLEARIAVRALLERCPDLALDVS 403
>pdb|2VZ7|A Chain A, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZ7|B Chain B, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZM|A Chain A, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
pdb|2VZM|B Chain B, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
Length = 436
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 84/209 (40%), Gaps = 30/209 (14%)
Query: 282 DEKR-KDFLDVMLDFEGNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTN 340
D KR +D D++ ++ ++++ ++L + +AG ETT + I + LL++
Sbjct: 223 DSKRGQDGEDLLSALVRTSDEDGSRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSH 282
Query: 341 PESLNKAKAELAQAVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNF 400
P+ L +A++ L ++E LR P+ R +E +
Sbjct: 283 PDQLAALRADMT------------------LLDGAVEEMLRYEGPVESATYRFPVEPVDL 324
Query: 401 QGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMC 460
G IP VLV R PE + +P F R D G + FG G C
Sbjct: 325 DGTVIPAGDTVLVVLADAHRTPERFPDPHRFDIRR------DTAGH----LAFGHGIHFC 374
Query: 461 AGVPLAHRMLHLILGSLLHQF-DWELDCK 488
G PLA + + +LL + D LD
Sbjct: 375 IGAPLARLEARIAVRALLERCPDLALDVS 403
>pdb|2WHW|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WHW|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
Length = 436
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 84/209 (40%), Gaps = 30/209 (14%)
Query: 282 DEKR-KDFLDVMLDFEGNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTN 340
D KR +D D++ ++ ++++ ++L + +AG ETT + I + LL++
Sbjct: 223 DSKRGQDGEDLLSALVRTSDEDGSRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSH 282
Query: 341 PESLNKAKAELAQAVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNF 400
P+ L +A++ L ++E LR P+ R +E +
Sbjct: 283 PDQLAALRADMT------------------LLDGAVEEMLRYEGPVESATYRFPVEPVDL 324
Query: 401 QGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMC 460
G IP VLV R PE + +P F R D G + FG G C
Sbjct: 325 DGTVIPAGDTVLVVLADAHRTPERFPDPHRFDIRR------DTAGH----LAFGHGIHFC 374
Query: 461 AGVPLAHRMLHLILGSLLHQF-DWELDCK 488
G PLA + + +LL + D LD
Sbjct: 375 IGAPLARLEARIAVRALLERCPDLALDVS 403
>pdb|4APY|A Chain A, Ethylene Glycol-bound Form Of P450 Cyp125a3 From
Mycobacterium Smegmatis
Length = 433
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 69/173 (39%), Gaps = 30/173 (17%)
Query: 305 KVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEED 364
K+S+ + F++ + +AG+ETT ++I + NP+ K E +
Sbjct: 235 KLSDDEFGFFVVMLAVAGNETTRNSITHGMIAFAQNPDQWELYKKERPETAA-------- 286
Query: 365 DIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEV 424
E +R P+ R A+ED G I K +V+++ + D EV
Sbjct: 287 ------------DEIVRWATPVSAFQ-RTALEDVELGGVQIKKGQRVVMSYRSANFDEEV 333
Query: 425 WDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSL 477
+++P +F R V + G G C G LA ++LI ++
Sbjct: 334 FEDPHTFNILRSPNPHVGFG---------GTGAHYCIGANLARMTINLIFNAI 377
>pdb|3A4Z|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A50|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A51|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
Length = 411
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 72/174 (41%), Gaps = 28/174 (16%)
Query: 305 KVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEED 364
++S+++L + + +AG ETT + I + LLT+P+ K AE
Sbjct: 220 RLSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPDQ-RKLLAE-------------- 264
Query: 365 DIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEV 424
+ + + ++E LR P+ R ED + G IP V++ A RD +
Sbjct: 265 ---DPSLISSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDAD- 320
Query: 425 WDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLL 478
W +P+R L T D G + FG G C G LA + +G L
Sbjct: 321 ----WMPEPDR-LDITRDASGGVF----FGHGIHFCLGAQLARLEGRVAIGRLF 365
>pdb|1GWI|A Chain A, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
pdb|1GWI|B Chain B, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
Length = 411
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 74/197 (37%), Gaps = 42/197 (21%)
Query: 321 AGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDDIDNLPYLKAVIKETL 380
AG ETT S I A+ L T+PE + A+ AV++ETL
Sbjct: 242 AGHETTISLIVNAVVNLSTHPEQRALVLSGEAE------------------WSAVVEETL 283
Query: 381 RLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPERFLGST 440
R P ++ R A ED IP ++V+ A+GRD ER G T
Sbjct: 284 RFSTPTSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALGRD------------ERAHGPT 331
Query: 441 VD----YKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDW--------ELDCK 488
D + I FG G +C G L+ + L +L +F EL K
Sbjct: 332 ADRFDLTRTSGNRHISFGHGPHVCPGAALSRMEAGVALPALYARFPHLDLAVPAAELRNK 391
Query: 489 EEIDMNDRMGITVRKAE 505
+ ND + VR A
Sbjct: 392 PVVTQNDLFELPVRLAH 408
>pdb|3A4G|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Trigonal Crystal Form)
pdb|3A4H|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Orthorhombic Crystal Form)
Length = 411
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 72/174 (41%), Gaps = 28/174 (16%)
Query: 305 KVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEED 364
++S+++L + + +AG ETT + I + LLT+P+ K AE
Sbjct: 220 RLSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPDQ-RKLLAE-------------- 264
Query: 365 DIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEV 424
+ + + ++E LR P+ R ED + G IP V++ A RD +
Sbjct: 265 ---DPSLISSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDAD- 320
Query: 425 WDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLL 478
W +P+R L T D G + FG G C G LA + +G L
Sbjct: 321 ----WMPEPDR-LDITRDASGGVF----FGHGIHFCLGAQLARLEGRVAIGRLF 365
>pdb|3TYW|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|C Chain C, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|D Chain D, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|4FXB|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
pdb|4FXB|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
Length = 417
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 72/178 (40%), Gaps = 28/178 (15%)
Query: 303 PAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFE 362
P V+ + L + AG ETT+S I + LL PE AEL +
Sbjct: 231 PGNVTTEQLLSTLGITINAGRETTTSMIALSTLLLLDRPE----LPAELRK--------- 277
Query: 363 EDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDP 422
D D +P A + E LR+ + R A ED G +P D V+ DP
Sbjct: 278 --DPDLMP---AAVDELLRVLSVADSIPLRVAAEDIELSGRTVPADDGVIALLAGANHDP 332
Query: 423 EVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQ 480
E +D+ PER VD+ + + FG G C G LA L + L +LL +
Sbjct: 333 EQFDD-----PER-----VDFHRTDNHHVAFGYGVHQCVGQHLARLELEVALETLLRR 380
>pdb|3DAM|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DAN|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DBM|A Chain A, Crystal Structure Of Allene Oxide Synthase
Length = 473
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 15/102 (14%)
Query: 349 AELAQAV-GADRTFEEDD-----IDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQ- 401
+LA+ + GA +++ + + I+ +P K+V+ E+LR+ PP+P P+ +NF
Sbjct: 301 TQLAEEIRGAIKSYGDGNVTLEAIEQMPLTKSVVYESLRIEPPVP---PQYGKAKSNFTI 357
Query: 402 -----GYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPERFLG 438
+ + K + +DP+V+D P + P+RF+G
Sbjct: 358 ESHDATFEVKKGEMLFGYQPFATKDPKVFDRPEEYVPDRFVG 399
>pdb|2Z36|A Chain A, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
pdb|2Z36|B Chain B, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
Length = 413
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 61/164 (37%), Gaps = 28/164 (17%)
Query: 318 IFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDDIDNLPYLKAVIK 377
+ AG ETT++ I + LL++PE L KA N ++
Sbjct: 242 LLTAGHETTANMISLGVVGLLSHPEQLTVVKA------------------NPGRTPMAVE 283
Query: 378 ETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPERFL 437
E LR + R A ED G I V+V+ + DP V+ +P ER
Sbjct: 284 ELLRYFTIADGVTSRLATEDVEIGGVSIKAGEGVIVSMLSANWDPAVFKDPAVLDVER-- 341
Query: 438 GSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQF 481
G + L FG G C G LA L ++ +L +
Sbjct: 342 -------GARHHLA-FGFGPHQCLGQNLARMELQIVFDTLFRRI 377
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 60/157 (38%), Gaps = 29/157 (18%)
Query: 318 IFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDDIDNLPYLKAVIK 377
+ + G+ETT I A+ L T P L + A D+D V++
Sbjct: 251 VLIGGNETTRHAITGAVHALATVPGLLTALRDGSA------------DVDT------VVE 292
Query: 378 ETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPERFL 437
E LR P V R D G +P T V+ A RDP +D+P +F P R
Sbjct: 293 EVLRWTSPA-MHVLRVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDTFLPGR-- 349
Query: 438 GSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLIL 474
+ I FG G C G LA L ++L
Sbjct: 350 --------KPNRHITFGHGMHHCLGSALARIELSVVL 378
>pdb|3RWL|A Chain A, Structure Of P450pyr Hydroxylase
Length = 426
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 75/167 (44%), Gaps = 28/167 (16%)
Query: 315 ILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDDIDNLPYLKA 374
+L + + G++TT +++ + L NP+ K KA N ++
Sbjct: 259 VLLLIVGGNDTTRNSMTGGVLALHKNPDQFAKLKA------------------NPALVET 300
Query: 375 VIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPE 434
++ E +R P+ + R A+ D+ G I K +V++ ++ RD EV D +PE
Sbjct: 301 MVPEIIRWQTPLAHMR-RTAIADSELGGKTIRKGDKVVMWYYSGNRDDEVID-----RPE 354
Query: 435 RFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQF 481
F+ +D + + + + FG G C G LA L ++ +L +F
Sbjct: 355 EFI---ID-RPRPRQHLSFGFGIHRCVGNRLAEMQLRILWEEILTRF 397
>pdb|1LFK|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LG9|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LGF|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
Length = 398
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 66/180 (36%), Gaps = 36/180 (20%)
Query: 306 VSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDD 365
++++L F +++ LAG + S I + +L +PE ++ + + A A
Sbjct: 221 ATDEELRGFCVQVMLAGDDNISGMIGLGVLAMLRHPEQIDAFRGDEQSAQRA-------- 272
Query: 366 IDNL-PYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEV 424
+D L YL T PR A ED G I K V+ + A RDP
Sbjct: 273 VDELIRYLTVPYSPT-----------PRIAREDLTLAGQEIKKGDSVICSLPAANRDPA- 320
Query: 425 WDEPWSFKPERFLGSTVDYKGQNYELIP---FGAGRRMCAGVPLAHRMLHLILGSLLHQF 481
L VD E IP FG G C G LA L + L +F
Sbjct: 321 ------------LAPDVDRLDVTREPIPHVAFGHGVHHCLGAALARLELRTVFTELWRRF 368
>pdb|1UE8|A Chain A, Crystal Structure Of Thermophilic Cytochrome P450 From
Sulfolobus Tokodaii
pdb|3B4X|A Chain A, Crystal Structure Analysis Of Sulfolobus Tokodaii Strain7
Cytochrom P450
Length = 367
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 84/198 (42%), Gaps = 39/198 (19%)
Query: 299 GKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTEL-LTNPESLNKAKAELAQAVGA 357
GK + +SE + + + + +AG+ETT++ I A+ + L N + K GA
Sbjct: 188 GKIANSNLSELEKEGYFILLMIAGNETTTNLIGNAIEDFTLYNSWDYVREK-------GA 240
Query: 358 DRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAW- 416
LKAV +E LR PP+ + R E + I D LV W
Sbjct: 241 --------------LKAV-EEALRFSPPVMRTI-RVTKEKVKIRDQVI--DEGELVRVWI 282
Query: 417 -AIGRDPEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILG 475
+ RD EV+ +P SF P+R + FG+G +C G PLA + L
Sbjct: 283 ASANRDEEVFKDPDSFIPDRTPNPH----------LSFGSGIHLCLGAPLARLEARIALE 332
Query: 476 SLLHQFDW-ELDCKEEID 492
+F E+ KE+ID
Sbjct: 333 EFAKKFRVKEIVKKEKID 350
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 63/145 (43%), Gaps = 24/145 (16%)
Query: 318 IFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDDIDNLPYLKAVIK 377
+ +AG ET +S + W+ L P+ + A+ A +
Sbjct: 218 LLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAAL------------------AAFQ 259
Query: 378 ETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPERFL 437
E LRL+PP +++ RR +P+ T ++++ + R + E +F+PERFL
Sbjct: 260 EALRLYPPA-WILTRRLERPLLLGEDRLPQGTTLVLSPYVTQRL--YFPEGEAFQPERFL 316
Query: 438 GSTVDYKGQNYELIPFGAGRRMCAG 462
G+ + PFG G+R+C G
Sbjct: 317 AERGTPSGRYF---PFGLGQRLCLG 338
>pdb|2YOO|A Chain A, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|B Chain B, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|C Chain C, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|D Chain D, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|3ZBY|A Chain A, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|B Chain B, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|C Chain C, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|D Chain D, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|E Chain E, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|F Chain F, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
Length = 407
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 82/205 (40%), Gaps = 33/205 (16%)
Query: 277 VTGTSDEKRKDFLDVMLDFEGNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTE 336
+T E D V+++ E G+ ++S+ ++ L I + G ETT T+ +
Sbjct: 193 ITKRRAEPTDDLFSVLVNSEVEGQ----RMSDDEIVFETLLILIGGDETTRHTLSGGTEQ 248
Query: 337 LLTNPESLNKAKAELAQAVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAME 396
LL + + + A D+D LP I+E LR P+ + R
Sbjct: 249 LLRHRDQWDALVA---------------DVDLLP---GAIEEMLRWTSPVKNMC-RTLTA 289
Query: 397 DTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAG 456
DT F G + ++++ + D V+ +P +F+ +R S V FG G
Sbjct: 290 DTVFHGTELRAGEKIMLMFESANFDESVFGDPDNFRIDRNPNSHV----------AFGFG 339
Query: 457 RRMCAGVPLAHRMLHLILGSLLHQF 481
C G LA L L+ +L +
Sbjct: 340 THFCLGNQLARLELRLMTERVLRRL 364
>pdb|1IO8|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO8|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 67/153 (43%), Gaps = 31/153 (20%)
Query: 314 FILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDDIDNLPYLK 373
+I+ + +AG+ETT++ I ++ + + L Q + + NL YLK
Sbjct: 202 YIILLLIAGNETTTNLISNSVIDF---------TRFNLWQRIREE---------NL-YLK 242
Query: 374 AVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKP 433
A I+E LR PP+ V R+ E I + V V + RD EV+ + F P
Sbjct: 243 A-IEEALRYSPPVMRTV-RKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEKFIP 300
Query: 434 ERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLA 466
+R N L FG+G +C G PLA
Sbjct: 301 DR---------NPNPHL-SFGSGIHLCLGAPLA 323
>pdb|1F4T|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4T|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4U|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1F4U|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1IO9|A Chain A, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO9|B Chain B, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 67/153 (43%), Gaps = 31/153 (20%)
Query: 314 FILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDDIDNLPYLK 373
+I+ + +AG+ETT++ I ++ + + L Q + + NL YLK
Sbjct: 202 YIILLLIAGNETTTNLISNSVIDF---------TRFNLWQRIREE---------NL-YLK 242
Query: 374 AVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKP 433
A I+E LR PP+ V R+ E I + V V + RD EV+ + F P
Sbjct: 243 A-IEEALRYSPPVMRTV-RKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEKFIP 300
Query: 434 ERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLA 466
+R N L FG+G +C G PLA
Sbjct: 301 DR---------NPNPHL-SFGSGIHLCLGAPLA 323
>pdb|2X5W|A Chain A, X-Ray Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125 In Complex With Substrate Cholest-4-En-3-One
Length = 440
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 96/244 (39%), Gaps = 58/244 (23%)
Query: 237 PILRRLDPQGLRRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFE 296
P +DP+ ++ +G A+++A E+K KN +D+ + +D E
Sbjct: 213 PEYAHIDPKASSAEL---IGYAMKMA--------EEKAKN---PADDIVTQLIQADIDGE 258
Query: 297 GNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNP---ESLNKAKAELAQ 353
K+S+ + F++ + +AG+ETT ++I + +P E K + E A
Sbjct: 259 --------KLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQWELYKKVRPETA- 309
Query: 354 AVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLV 413
AD E +R P+ R A+ D G I K +V++
Sbjct: 310 ---AD-------------------EIVRWATPVTAFQ-RTALRDYELSGVQIKKGQRVVM 346
Query: 414 NAWAIGRDPEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLI 473
+ D EV+ +P++F R V + G G C G LA ++LI
Sbjct: 347 FYRSANFDEEVFQDPFTFNILRNPNPHVGFG---------GTGAHYCIGANLARMTINLI 397
Query: 474 LGSL 477
++
Sbjct: 398 FNAV 401
>pdb|3IVY|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125, P212121 Crystal Form
pdb|3IW0|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125, C2221 Crystal Form
pdb|3IW1|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125 In Complex With Androstenedione
pdb|3IW2|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125 In Complex With Econazole
Length = 433
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 96/244 (39%), Gaps = 58/244 (23%)
Query: 237 PILRRLDPQGLRRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFE 296
P +DP+ ++ +G A+++A E+K KN +D+ + +D E
Sbjct: 206 PEYAHIDPKASSAEL---IGYAMKMA--------EEKAKN---PADDIVTQLIQADIDGE 251
Query: 297 GNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNP---ESLNKAKAELAQ 353
K+S+ + F++ + +AG+ETT ++I + +P E K + E A
Sbjct: 252 --------KLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQWELYKKVRPETA- 302
Query: 354 AVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLV 413
AD E +R P+ R A+ D G I K +V++
Sbjct: 303 ---AD-------------------EIVRWATPVTAFQ-RTALRDYELSGVQIKKGQRVVM 339
Query: 414 NAWAIGRDPEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLI 473
+ D EV+ +P++F R V + G G C G LA ++LI
Sbjct: 340 FYRSANFDEEVFQDPFTFNILRNPNPHVGFG---------GTGAHYCIGANLARMTINLI 390
Query: 474 LGSL 477
++
Sbjct: 391 FNAV 394
>pdb|2XC3|A Chain A, X-Ray Structure Of Mycobacterium Tuberculosis Cyp125 Bound
To The Reverse Type I Inhibitor
Length = 424
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 96/244 (39%), Gaps = 58/244 (23%)
Query: 237 PILRRLDPQGLRRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFE 296
P +DP+ ++ +G A+++A E+K KN +D+ + +D E
Sbjct: 197 PEYAHIDPKASSAEL---IGYAMKMA--------EEKAKN---PADDIVTQLIQADIDGE 242
Query: 297 GNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNP---ESLNKAKAELAQ 353
K+S+ + F++ + +AG+ETT ++I + +P E K + E A
Sbjct: 243 --------KLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQWELYKKVRPETA- 293
Query: 354 AVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLV 413
AD E +R P+ R A+ D G I K +V++
Sbjct: 294 ---AD-------------------EIVRWATPVTAFQ-RTALRDYELSGVQIKKGQRVVM 330
Query: 414 NAWAIGRDPEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLI 473
+ D EV+ +P++F R V + G G C G LA ++LI
Sbjct: 331 FYRSANFDEEVFQDPFTFNILRNPNPHVGFG---------GTGAHYCIGANLARMTINLI 381
Query: 474 LGSL 477
++
Sbjct: 382 FNAV 385
>pdb|2XN8|A Chain A, X-Ray Structure Of The Substrate-Free Mycobacterium
Tuberculosis Cytochrome P450 Cyp125
Length = 423
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 96/244 (39%), Gaps = 58/244 (23%)
Query: 237 PILRRLDPQGLRRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFE 296
P +DP+ ++ +G A+++A E+K KN +D+ + +D E
Sbjct: 196 PEYAHIDPKASSAEL---IGYAMKMA--------EEKAKN---PADDIVTQLIQADIDGE 241
Query: 297 GNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNP---ESLNKAKAELAQ 353
K+S+ + F++ + +AG+ETT ++I + +P E K + E A
Sbjct: 242 --------KLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQWELYKKVRPETA- 292
Query: 354 AVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLV 413
AD E +R P+ R A+ D G I K +V++
Sbjct: 293 ---AD-------------------EIVRWATPVTAFQ-RTALRDYELSGVQIKKGQRVVM 329
Query: 414 NAWAIGRDPEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLI 473
+ D EV+ +P++F R V + G G C G LA ++LI
Sbjct: 330 FYRSANFDEEVFQDPFTFNILRNPNPHVGFG---------GTGAHYCIGANLARMTINLI 380
Query: 474 LGSL 477
++
Sbjct: 381 FNAV 384
>pdb|3ABB|A Chain A, Crystal Structure Of Cyp105d6
Length = 408
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 68/177 (38%), Gaps = 29/177 (16%)
Query: 302 EPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTF 361
E + ++ + L + +AG ETT + I L+ +PE ++ L + GA
Sbjct: 224 EEGDLDHDEVVMIALVLLVAGHETTVNAIALGALTLIQHPEQIDV----LLRDPGA---- 275
Query: 362 EEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRD 421
+ V++E LR +V R A ED G I VLV+ + RD
Sbjct: 276 ----------VSGVVEELLRFTSVSDHIV-RMAKEDIEVGGATIKAGDAVLVSITLMNRD 324
Query: 422 PEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLL 478
+ ++ P F D + + FG G C G LA L + LG L
Sbjct: 325 AKAYENPDIF----------DARRNARHHVGFGHGIHQCLGQNLARAELEIALGGLF 371
>pdb|2X5L|A Chain A, X-Ray Structure Of The Substrate-Free Mycobacterium
Tuberculosis Cytochrome P450 Cyp125, Alternative Crystal
Form
Length = 431
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 96/244 (39%), Gaps = 58/244 (23%)
Query: 237 PILRRLDPQGLRRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFE 296
P +DP+ ++ +G A+++A E+K KN +D+ + +D E
Sbjct: 204 PEYAHIDPKASSAEL---IGYAMKMA--------EEKAKN---PADDIVTQLIQADIDGE 249
Query: 297 GNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNP---ESLNKAKAELAQ 353
K+S+ + F++ + +AG+ETT ++I + +P E K + E A
Sbjct: 250 --------KLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQWELYKKVRPETA- 300
Query: 354 AVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLV 413
AD E +R P+ R A+ D G I K +V++
Sbjct: 301 ---AD-------------------EIVRWATPVTAFQ-RTALRDYELSGVQIKKGQRVVM 337
Query: 414 NAWAIGRDPEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLI 473
+ D EV+ +P++F R V + G G C G LA ++LI
Sbjct: 338 FYRSANFDEEVFQDPFTFNILRNPNPHVGFG---------GTGAHYCIGANLARMTINLI 388
Query: 474 LGSL 477
++
Sbjct: 389 FNAV 392
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 62/149 (41%), Gaps = 32/149 (21%)
Query: 318 IFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDDIDNLPYLKAVIK 377
+ +AG ET +S + W+ L P+ + A+ A +
Sbjct: 218 LLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAAL------------------AAFQ 259
Query: 378 ETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGR----DPEVWDEPWSFKP 433
E LRL+PP +++ RR +P T ++++ + R D E +F+P
Sbjct: 260 EALRLYPPA-WILTRRLERPLLLGEDRLPPGTTLVLSPYVTQRLHFPDGE------AFRP 312
Query: 434 ERFLGSTVDYKGQNYELIPFGAGRRMCAG 462
ERFL G+ + PFG G+R+C G
Sbjct: 313 ERFLEERGTPSGRYF---PFGLGQRLCLG 338
>pdb|3BUJ|A Chain A, Crystal Structure Of Calo2
Length = 397
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 73/184 (39%), Gaps = 40/184 (21%)
Query: 286 KDFLDVMLDFEGNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLN 345
+D L +MLD G +S ++ ++ G ET +S + A+ LL +P+ L+
Sbjct: 203 EDLLALMLDAHDRGL-----MSRNEIVSTVVTFIFTGHETVASQVGNAVLSLLAHPDQLD 257
Query: 346 KAKAE---LAQAVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQG 402
+ LAQAV +E LR P + R+ D +G
Sbjct: 258 LLRRRPDLLAQAV---------------------EECLRYDPSVQSNT-RQLDVDVELRG 295
Query: 403 YHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAG 462
+ +D V+V A A RDP +D P F ER + FGAG R C G
Sbjct: 296 RRLRRDDVVVVLAGAANRDPRRYDRPDDFDIER----------DPVPSMSFGAGMRYCLG 345
Query: 463 VPLA 466
LA
Sbjct: 346 SYLA 349
>pdb|4EP6|A Chain A, Crystal Structure Of The Xpla Heme Domain In Complex With
Imidazole And Peg
Length = 392
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 11/90 (12%)
Query: 374 AVIKETLRLHPP-IPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFK 432
A+I E +R+ PP + FL R ED G I + + A RDPEV+D+P F
Sbjct: 266 AIINEMVRMDPPQLSFL--RFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFD 323
Query: 433 PERFLGSTVDYKGQNYELIPFGAGRRMCAG 462
R ++ + + FG G CAG
Sbjct: 324 HTRPPAASRN--------LSFGLGPHSCAG 345
>pdb|2WIV|A Chain A, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIV|B Chain B, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIY|A Chain A, Cytochrome P450 Xpla Heme Domain P21212
Length = 394
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 11/90 (12%)
Query: 374 AVIKETLRLHPP-IPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFK 432
A+I E +R+ PP + FL R ED G I + + A RDPEV+D+P F
Sbjct: 268 AIINEMVRMDPPQLSFL--RFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFD 325
Query: 433 PERFLGSTVDYKGQNYELIPFGAGRRMCAG 462
R ++ + + FG G CAG
Sbjct: 326 HTRPPAASRN--------LSFGLGPHSCAG 347
>pdb|2WM4|A Chain A, X-Ray Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp124 In Complex With Phytanic Acid
pdb|2WM5|A Chain A, X-Ray Structure Of The Substrate-Free Mycobacterium
Tuberculosis Cytochrome P450 Cyp124
Length = 435
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 79/195 (40%), Gaps = 33/195 (16%)
Query: 287 DFLDVMLDFEGNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNK 346
D +++ E +G+ ++S +++ F + + +AG+ETT + I + L PE ++
Sbjct: 244 DLTSSLVEAEVDGE----RLSSREIASFFILLVVAGNETTRNAITHGVLALSRYPEQRDR 299
Query: 347 AKAELAQAVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAM-EDTNFQGYHI 405
+ D D L ++E +R P+ ++ RR + +D +G +
Sbjct: 300 WWS---------------DFDGL--APTAVEEIVRWASPVVYM--RRTLTQDIELRGTKM 340
Query: 406 PKDTQVLVNAWAIGRDPEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPL 465
+V + + RD + +PW+F R N L G G C G L
Sbjct: 341 AAGDKVSLWYCSANRDESKFADPWTFDLAR---------NPNPHLGFGGGGAHFCLGANL 391
Query: 466 AHRMLHLILGSLLHQ 480
A R + + L Q
Sbjct: 392 ARREIRVAFDELRRQ 406
>pdb|2FR7|A Chain A, Crystal Structure Of Cytochrome P450 Cyp199a2
pdb|4DNJ|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a2
Length = 412
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 70/174 (40%), Gaps = 29/174 (16%)
Query: 304 AKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEE 363
+++ ++ + + + AG +TT + I A+ L P+ + +A+ + A
Sbjct: 234 GEITPEEAPLLVRSLLSAGLDTTVNGIAAAVYCLARFPDEFARLRADPSLA--------- 284
Query: 364 DDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPE 423
+ +E +R P+ R D G I + +VL+ + RDP
Sbjct: 285 ---------RNAFEEAVRFESPVQTFF-RTTTRDVELAGATIGEGEKVLMFLGSANRDPR 334
Query: 424 VWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSL 477
WD+ P+R+ D + + FG+G MC G +A ++L +L
Sbjct: 335 RWDD-----PDRY-----DITRKTSGHVGFGSGVHMCVGQLVARLEGEVVLAAL 378
>pdb|1S1F|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 36.2 bits (82), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 10/87 (11%)
Query: 392 RRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPERFLGSTVDYKGQNYELI 451
R A+ED +G I V V+ A RDPEV+ +P +D++ +
Sbjct: 295 RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDP----------DRIDFERSPNPHV 344
Query: 452 PFGAGRRMCAGVPLAHRMLHLILGSLL 478
FG G C G LA L++ ++L
Sbjct: 345 SFGFGPHYCPGGMLARLESELLVDAVL 371
>pdb|1T93|A Chain A, Evidence For Multiple Substrate Recognition And Molecular
Mechanism Of C-C Reaction By Cytochrome P450 Cyp158a2
From Streptomyces Coelicolor A3(2)
Length = 406
Score = 36.2 bits (82), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 10/87 (11%)
Query: 392 RRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPERFLGSTVDYKGQNYELI 451
R A+ED +G I V V+ A RDPEV+ +P +D++ +
Sbjct: 295 RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDP----------DRIDFERSPNPHV 344
Query: 452 PFGAGRRMCAGVPLAHRMLHLILGSLL 478
FG G C G LA L++ ++L
Sbjct: 345 SFGFGPHYCPGGMLARLESELLVDAVL 371
>pdb|3TZO|A Chain A, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
pdb|3TZO|B Chain B, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
Length = 410
Score = 36.2 bits (82), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 10/87 (11%)
Query: 392 RRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPERFLGSTVDYKGQNYELI 451
R A+ED +G I V V+ A RDPEV+ +P +D++ +
Sbjct: 295 RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDP----------DRIDFERSPNPHV 344
Query: 452 PFGAGRRMCAGVPLAHRMLHLILGSLL 478
FG G C G LA L++ ++L
Sbjct: 345 SFGFGPHYCPGGMLARLESELLVDAVL 371
>pdb|2D09|A Chain A, A Role For Active Site Water Molecules And Hydroxyl Groups
Of Substrate For Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 10/87 (11%)
Query: 392 RRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPERFLGSTVDYKGQNYELI 451
R A+ED +G I V V+ A RDPEV+ +P +D++ +
Sbjct: 295 RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDP----------DRIDFERSPNPHV 344
Query: 452 PFGAGRRMCAGVPLAHRMLHLILGSLL 478
FG G C G LA L++ ++L
Sbjct: 345 SFGFGPHYCPGGMLARLESELLVDAVL 371
>pdb|3TNK|A Chain A, Crystal Structure Of Mutant I87r In Cyp158a2
pdb|3TNK|B Chain B, Crystal Structure Of Mutant I87r In Cyp158a2
Length = 407
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 10/87 (11%)
Query: 392 RRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPERFLGSTVDYKGQNYELI 451
R A+ED +G I V V+ A RDPEV+ +P +D++ +
Sbjct: 295 RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDP----------DRIDFERSPNPHV 344
Query: 452 PFGAGRRMCAGVPLAHRMLHLILGSLL 478
FG G C G LA L++ ++L
Sbjct: 345 SFGFGPHYCPGGMLARLESELLVDAVL 371
>pdb|1SE6|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
pdb|1SE6|B Chain B, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 10/87 (11%)
Query: 392 RRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPERFLGSTVDYKGQNYELI 451
R A+ED +G I V V+ A RDPEV+ +P +D++ +
Sbjct: 295 RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDP----------DRIDFERSPNPHV 344
Query: 452 PFGAGRRMCAGVPLAHRMLHLILGSLL 478
FG G C G LA L++ ++L
Sbjct: 345 SFGFGPHYCPGGMLARLESELLVDAVL 371
>pdb|2D0E|A Chain A, Substrate Assited In Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 10/87 (11%)
Query: 392 RRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPERFLGSTVDYKGQNYELI 451
R A+ED +G I V V+ A RDPEV+ +P +D++ +
Sbjct: 295 RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDP----------DRIDFERSPNPHV 344
Query: 452 PFGAGRRMCAGVPLAHRMLHLILGSLL 478
FG G C G LA L++ ++L
Sbjct: 345 SFGFGPHYCPGGMLARLESELLVDAVL 371
>pdb|3CV8|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84f Mutant)
Length = 412
Score = 35.8 bits (81), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 61/161 (37%), Gaps = 28/161 (17%)
Query: 318 IFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDDIDNLPYLKAVIK 377
+ +AG ETT+S ++ LL +PE A+ ADR+ + ++
Sbjct: 241 LLIAGHETTASMTSLSVITLLDHPEQY--------AALRADRSL----------VPGAVE 282
Query: 378 ETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPERFL 437
E LR R A D +G I V+V RD V+++P
Sbjct: 283 ELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDP--------- 333
Query: 438 GSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLL 478
+D + FG G C G LA L +IL +L+
Sbjct: 334 -DALDIHRSARHHLAFGFGVHQCLGQNLARLELEVILNALM 373
>pdb|2ZBX|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (Wild Type) With Imidazole Bound
Length = 412
Score = 35.8 bits (81), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 61/161 (37%), Gaps = 28/161 (17%)
Query: 318 IFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDDIDNLPYLKAVIK 377
+ +AG ETT+S ++ LL +PE A+ ADR+ + ++
Sbjct: 241 LLIAGHETTASMTSLSVITLLDHPEQY--------AALRADRSL----------VPGAVE 282
Query: 378 ETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPERFL 437
E LR R A D +G I V+V RD V+++P
Sbjct: 283 ELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDP--------- 333
Query: 438 GSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLL 478
+D + FG G C G LA L +IL +L+
Sbjct: 334 -DALDIHRSARHHLAFGFGVHQCLGQNLARLELEVILNALM 373
>pdb|2ZBY|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant)
pdb|2ZBZ|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant) In Complex With
1,25-Dihydroxyvitamin D3
Length = 412
Score = 35.8 bits (81), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 61/161 (37%), Gaps = 28/161 (17%)
Query: 318 IFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDDIDNLPYLKAVIK 377
+ +AG ETT+S ++ LL +PE A+ ADR+ + ++
Sbjct: 241 LLIAGHETTASMTSLSVITLLDHPEQY--------AALRADRSL----------VPGAVE 282
Query: 378 ETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPERFL 437
E LR R A D +G I V+V RD V+++P
Sbjct: 283 ELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDP--------- 333
Query: 438 GSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLL 478
+D + FG G C G LA L +IL +L+
Sbjct: 334 -DALDIHRSARHHLAFGFGVHQCLGQNLARLELEVILNALM 373
>pdb|2Z3T|A Chain A, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|B Chain B, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|C Chain C, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|D Chain D, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3U|A Chain A, Crystal Structure Of Chromopyrrolic Acid Bound Cytochrome
P450 Stap (Cyp245a1)
pdb|3A1L|A Chain A, Crystal Structure Of 11,11'-Dichlorochromopyrrolic Acid
Bound Cytochrome P450 Stap (Cyp245a1)
Length = 425
Score = 35.8 bits (81), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 76/199 (38%), Gaps = 29/199 (14%)
Query: 299 GKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGAD 358
+D + +S + + + AG ETT++ + A+ L + + L++
Sbjct: 232 ARDTGSPLSVDGIVGTCVHLLTAGHETTTNFLAKAVLTLRAHRDVLDEL----------- 280
Query: 359 RTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAI 418
RT E A ++E +R PP+ V R A ED + IP+ ++V+ +
Sbjct: 281 RTTPES-------TPAAVEELMRYDPPVQ-AVTRWAYEDIRLGDHDIPRGSRVVALLGSA 332
Query: 419 GRDPEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLL 478
RDP + +P +D + FG G C G LA + L +LL
Sbjct: 333 NRDPARFPDP----------DVLDVHRAAERQVGFGLGIHYCLGATLARAEAEIGLRALL 382
Query: 479 HQFDWELDCKEEIDMNDRM 497
E++ D M
Sbjct: 383 DGIPALGRGAHEVEYADDM 401
>pdb|3CV9|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R73aR84A MUTANT) IN COMPLEX WITH 1ALPHA,25-
Dihydroxyvitamin D3
Length = 412
Score = 35.4 bits (80), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 61/161 (37%), Gaps = 28/161 (17%)
Query: 318 IFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDDIDNLPYLKAVIK 377
+ +AG ETT+S ++ LL +PE A+ ADR+ + ++
Sbjct: 241 LLIAGHETTASMTSLSVITLLDHPEQY--------AALRADRSL----------VPGAVE 282
Query: 378 ETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPERFL 437
E LR R A D +G I V+V RD V+++P
Sbjct: 283 ELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDP--------- 333
Query: 438 GSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLL 478
+D + FG G C G LA L +IL +L+
Sbjct: 334 -DALDIHRSARHHLAFGFGVHQCLGQNLARLELEVILNALM 373
>pdb|1EHG|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 35.0 bits (79), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 65/180 (36%), Gaps = 26/180 (14%)
Query: 302 EPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTF 361
+P + + D + +AG+ T + I + L +P+ L + KA + A
Sbjct: 220 KPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKANPSLA------- 272
Query: 362 EEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRD 421
++E R H + + R A ED + + ++ + + RD
Sbjct: 273 -----------PQFVEELCRYHTAVALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRD 321
Query: 422 PEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQF 481
EV++ P F R K + + FG G C LA L + +L +F
Sbjct: 322 EEVFENPDEFNMNR--------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 373
>pdb|1CMN|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 35.0 bits (79), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 65/180 (36%), Gaps = 26/180 (14%)
Query: 302 EPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTF 361
+P + + D + +AG+ T + I + L +P+ L + KA + A
Sbjct: 219 KPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKANPSLA------- 271
Query: 362 EEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRD 421
++E R H + + R A ED + + ++ + + RD
Sbjct: 272 -----------PQFVEELCRYHTAVALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRD 320
Query: 422 PEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQF 481
EV++ P F R K + + FG G C LA L + +L +F
Sbjct: 321 EEVFENPDEFNMNR--------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|2NZ5|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZ5|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
Length = 413
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 36/90 (40%), Gaps = 10/90 (11%)
Query: 392 RRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPERFLGSTVDYKGQNYELI 451
R A+ED G I V V+ A RDP+V+ +P +D +
Sbjct: 298 RIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDP----------DRIDLDRDPNPHL 347
Query: 452 PFGAGRRMCAGVPLAHRMLHLILGSLLHQF 481
+G G C G LA L++ +LL +
Sbjct: 348 AYGNGHHFCTGAVLARMQTELLVDTLLERL 377
>pdb|2DKK|A Chain A, Structure/function Studies Of Cytochrome P450 158a1 From
Streptomyces Coelicolor A3(2)
Length = 411
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 36/90 (40%), Gaps = 10/90 (11%)
Query: 392 RRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPERFLGSTVDYKGQNYELI 451
R A+ED G I V V+ A RDP+V+ +P +D +
Sbjct: 298 RIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDP----------DRIDLDRDPNPHL 347
Query: 452 PFGAGRRMCAGVPLAHRMLHLILGSLLHQF 481
+G G C G LA L++ +LL +
Sbjct: 348 AYGNGHHFCTGAVLARMQTELLVDTLLERL 377
>pdb|1EHF|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 64/180 (35%), Gaps = 26/180 (14%)
Query: 302 EPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTF 361
+P + + D + +AG+ T + I + L +P+ L + KA + A
Sbjct: 220 KPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKANPSLA------- 272
Query: 362 EEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRD 421
++E R H + R A ED + + ++ + + RD
Sbjct: 273 -----------PQFVEELCRYHTATALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRD 321
Query: 422 PEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQF 481
EV++ P F R K + + FG G C LA L + +L +F
Sbjct: 322 EEVFENPDEFNMNR--------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 373
>pdb|1CMJ|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 64/180 (35%), Gaps = 26/180 (14%)
Query: 302 EPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTF 361
+P + + D + +AG+ T + I + L +P+ L + KA + A
Sbjct: 219 KPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKANPSLA------- 271
Query: 362 EEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRD 421
++E R H + R A ED + + ++ + + RD
Sbjct: 272 -----------PQFVEELCRYHTATALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRD 320
Query: 422 PEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQF 481
EV++ P F R K + + FG G C LA L + +L +F
Sbjct: 321 EEVFENPDEFNMNR--------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|2RCM|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|2RCM|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|3DSJ|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSJ|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSK|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
pdb|3DSK|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
Length = 495
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 366 IDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIP---KDTQVLVNAWAIG-RD 421
I+ + K+V+ E LR PP+ RA +D + + K ++L + RD
Sbjct: 341 IEKMELTKSVVYECLRFEPPVTAQY-GRAKKDLVIESHDAAFKVKAGEMLYGYQPLATRD 399
Query: 422 PEVWDEPWSFKPERFLG 438
P+++D F PERF+G
Sbjct: 400 PKIFDRADEFVPERFVG 416
>pdb|1XQD|A Chain A, Crystal Structure Of P450nor Complexed With 3-
Pyridinealdehyde Adenine Dinucleotide
Length = 403
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 64/180 (35%), Gaps = 26/180 (14%)
Query: 302 EPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTF 361
+P + + D + +AG+ T + I + L +P+ L + KA + A
Sbjct: 220 KPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKANPSLA------- 272
Query: 362 EEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRD 421
++E R H + R A ED + + ++ + + RD
Sbjct: 273 -----------PQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRD 321
Query: 422 PEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQF 481
EV++ P F R K + + FG G C LA L + +L +F
Sbjct: 322 EEVFENPDEFNMNR--------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 373
>pdb|2RCH|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCH|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|2RCL|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|3CLI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3CLI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3DSI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
pdb|3DSI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
Length = 495
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 366 IDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIP---KDTQVLVNAWAIG-RD 421
I+ + K+V+ E LR PP+ RA +D + + K ++L + RD
Sbjct: 341 IEKMELTKSVVYECLRFEPPVTAQY-GRAKKDLVIESHDAAFKVKAGEMLYGYQPLATRD 399
Query: 422 PEVWDEPWSFKPERFLG 438
P+++D F PERF+G
Sbjct: 400 PKIFDRADEFVPERFVG 416
>pdb|1ULW|A Chain A, Crystal Structure Of P450nor Ser73gly/ser75gly Mutant
Length = 402
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 64/180 (35%), Gaps = 26/180 (14%)
Query: 302 EPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTF 361
+P + + D + +AG+ T + I + L +P+ L + KA + A
Sbjct: 219 KPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKANPSLA------- 271
Query: 362 EEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRD 421
++E R H + R A ED + + ++ + + RD
Sbjct: 272 -----------PQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRD 320
Query: 422 PEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQF 481
EV++ P F R K + + FG G C LA L + +L +F
Sbjct: 321 EEVFENPDEFNMNR--------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1JFB|A Chain A, X-Ray Structure Of Nitric Oxide Reductase (Cytochrome
P450nor) In The Ferric Resting State At Atomic
Resolution
pdb|1JFC|A Chain A, X-ray Structure Of Nitric Oxide Reductase (cytochrome
P450nor) In The Ferrous Co State At Atomic Resolution
Length = 404
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 64/180 (35%), Gaps = 26/180 (14%)
Query: 302 EPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTF 361
+P + + D + +AG+ T + I + L +P+ L + KA + A
Sbjct: 221 KPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKANPSLA------- 273
Query: 362 EEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRD 421
++E R H + R A ED + + ++ + + RD
Sbjct: 274 -----------PQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRD 322
Query: 422 PEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQF 481
EV++ P F R K + + FG G C LA L + +L +F
Sbjct: 323 EEVFENPDEFNMNR--------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 374
>pdb|1EHE|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
pdb|1GEI|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1GED|A Chain A, A Positive Charge Route For The Access Of Nadh To Heme
Formed In The Distal Heme Pocket Of Cytochrome P450nor
pdb|1GEJ|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum
pdb|2ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum Complex With Carbon Monoxide
Length = 403
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 64/180 (35%), Gaps = 26/180 (14%)
Query: 302 EPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTF 361
+P + + D + +AG+ T + I + L +P+ L + KA + A
Sbjct: 220 KPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKANPSLA------- 272
Query: 362 EEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRD 421
++E R H + R A ED + + ++ + + RD
Sbjct: 273 -----------PQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRD 321
Query: 422 PEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQF 481
EV++ P F R K + + FG G C LA L + +L +F
Sbjct: 322 EEVFENPDEFNMNR--------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 373
>pdb|1CL6|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Its Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 64/180 (35%), Gaps = 26/180 (14%)
Query: 302 EPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTF 361
+P + + D + +AG+ T + I + L +P+ L + KA + A
Sbjct: 219 KPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKANPSLA------- 271
Query: 362 EEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRD 421
++E R H + R A ED + + ++ + + RD
Sbjct: 272 -----------PQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRD 320
Query: 422 PEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQF 481
EV++ P F R K + + FG G C LA L + +L +F
Sbjct: 321 EEVFENPDEFNMNR--------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|3E5L|A Chain A, Crystal Structure Of Cyp105p1 H72a Mutant
Length = 403
Score = 32.7 bits (73), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 35/90 (38%), Gaps = 10/90 (11%)
Query: 392 RRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPERFLGSTVDYKGQNYELI 451
R A D G I K QV+ + A DP +E PERF D + +
Sbjct: 290 RVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEE-----PERF-----DITRRPAPHL 339
Query: 452 PFGAGRRMCAGVPLAHRMLHLILGSLLHQF 481
FG G C G LA L ++ +L +
Sbjct: 340 AFGFGAHQCIGQQLARIELQIVFETLFRRL 369
>pdb|3E5J|A Chain A, Crystal Structure Of Cyp105p1 Wild-type Ligand-free Form
pdb|3E5K|A Chain A, Crystal Structure Of Cyp105p1 Wild-Type 4-Phenylimidazole
Complex
Length = 403
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 35/90 (38%), Gaps = 10/90 (11%)
Query: 392 RRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPERFLGSTVDYKGQNYELI 451
R A D G I K QV+ + A DP +E PERF D + +
Sbjct: 290 RVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEE-----PERF-----DITRRPAPHL 339
Query: 452 PFGAGRRMCAGVPLAHRMLHLILGSLLHQF 481
FG G C G LA L ++ +L +
Sbjct: 340 AFGFGAHQCIGQQLARIELQIVFETLFRRL 369
>pdb|3ABA|A Chain A, Crystal Structure Of Cyp105p1 In Complex With Filipin I
Length = 403
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 35/90 (38%), Gaps = 10/90 (11%)
Query: 392 RRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPERFLGSTVDYKGQNYELI 451
R A D G I K QV+ + A DP +E PERF D + +
Sbjct: 290 RVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEE-----PERF-----DITRRPAPHL 339
Query: 452 PFGAGRRMCAGVPLAHRMLHLILGSLLHQF 481
FG G C G LA L ++ +L +
Sbjct: 340 AFGFGAHQCIGQQLARIELQIVFETLFRRL 369
>pdb|3CY1|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 S279a
Mutant From M. Tuberculosis
Length = 396
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 67/180 (37%), Gaps = 31/180 (17%)
Query: 304 AKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPE--SLNKAKAELAQAVGADRTF 361
+ VS++ + F AG +T S + AL L+ P+ +L K EL
Sbjct: 216 SHVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHEKPEL---------- 265
Query: 362 EEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRD 421
+ A ++E LR++ +PR A D + K VLV D
Sbjct: 266 ----------IPAGVEELLRINLAFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFD 315
Query: 422 PEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQF 481
PE + P S + +D L FG G+ C G L R + + +LL +
Sbjct: 316 PEHFPNPGSIE--------LDRPNPTSHLA-FGRGQHFCPGSALGRRHAQIGIEALLKKM 366
>pdb|1N40|A Chain A, Atomic Structure Of Cyp121, A Mycobacterial P450
pdb|1N4G|A Chain A, Structure Of Cyp121, A Mycobacterial P450, In Complex With
Iodopyrazole
pdb|2IJ5|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|B Chain B, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|C Chain C, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|D Chain D, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|E Chain E, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|F Chain F, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ7|A Chain A, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|B Chain B, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|C Chain C, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|D Chain D, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|E Chain E, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|F Chain F, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|3G5F|A Chain A, Crystallographic Analysis Of Cytochrome P450 Cyp121
pdb|3G5H|A Chain A, Crystallographic Analysis Of Cytochrome P450 Cyp121
pdb|4G44|A Chain A, Structure Of P450 Cyp121 In Complex With Lead Compound
Mb286, 3-((1h- 1,2,4-Triazol-1-Yl)methyl)aniline
pdb|4G45|A Chain A, Structure Of Cytochrome Cyp121 In Complex With
2-Methylquinolin-6- Amine
pdb|4G46|A Chain A, Structure Of Cytochrome P450 Cyp121 In Complex With
4-Oxo-4,5,6,7- Tetrahydrobenzofuran-3-Carboxylate
pdb|4G47|A Chain A, Structure Of Cytochrome P450 Cyp121 In Complex With
4-(1h-1,2,4- Triazol-1-Yl)phenol
pdb|4G48|A Chain A, Structure Of Cyp121 In Complex With
4-(4-Phenoxy-1h-Pyrazol-3-Yl) Benzene-1,3-Diol
Length = 396
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 67/180 (37%), Gaps = 31/180 (17%)
Query: 304 AKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPE--SLNKAKAELAQAVGADRTF 361
+ VS++ + F AG +T S + AL L+ P+ +L K EL
Sbjct: 216 SHVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHEKPEL---------- 265
Query: 362 EEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRD 421
+ A ++E LR++ +PR A D + K VLV D
Sbjct: 266 ----------IPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFD 315
Query: 422 PEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQF 481
PE + P S + +D L FG G+ C G L R + + +LL +
Sbjct: 316 PEHFPNPGSIE--------LDRPNPTSHLA-FGRGQHFCPGSALGRRHAQIGIEALLKKM 366
>pdb|1F25|A Chain A, Crystal Structure Of No Complex Of Thr243asn Mutants Of
Cytochrome P450nor
Length = 402
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/180 (19%), Positives = 63/180 (35%), Gaps = 26/180 (14%)
Query: 302 EPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTF 361
+P + + D + +AG+ + I + L +P+ L + KA + A
Sbjct: 219 KPGNIDKSDAVQIAFLLLVAGNANMVNMIALGVATLAQHPDQLAQLKANPSLA------- 271
Query: 362 EEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRD 421
++E R H + R A ED + + ++ + + RD
Sbjct: 272 -----------PQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRD 320
Query: 422 PEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQF 481
EV++ P F R K + + FG G C LA L + +L +F
Sbjct: 321 EEVFENPDEFNMNR--------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1F24|A Chain A, Crystal Structure Of No Complex Of Thr243ala Mutants Of
Cytochrome P450nor
Length = 402
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/180 (19%), Positives = 63/180 (35%), Gaps = 26/180 (14%)
Query: 302 EPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTF 361
+P + + D + +AG+ + I + L +P+ L + KA + A
Sbjct: 219 KPGNIDKSDAVQIAFLLLVAGNAAMVNMIALGVATLAQHPDQLAQLKANPSLA------- 271
Query: 362 EEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRD 421
++E R H + R A ED + + ++ + + RD
Sbjct: 272 -----------PQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRD 320
Query: 422 PEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQF 481
EV++ P F R K + + FG G C LA L + +L +F
Sbjct: 321 EEVFENPDEFNMNR--------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|4G1X|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp121 In
Complex With 4-(1h-1,2,4-Triazol-1-Yl)quinolin-6-Amine
pdb|4G2G|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp121 In
Complex With 4,4'-(1h-1,2,3-Triazole-1,5-Diyl)diphenol
Length = 395
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 67/180 (37%), Gaps = 31/180 (17%)
Query: 304 AKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPE--SLNKAKAELAQAVGADRTF 361
+ VS++ + F AG +T S + AL L+ P+ +L K EL
Sbjct: 215 SHVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHEKPEL---------- 264
Query: 362 EEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRD 421
+ A ++E LR++ +PR A D + K VLV D
Sbjct: 265 ----------IPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFD 314
Query: 422 PEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQF 481
PE + P S + +D L FG G+ C G L R + + +LL +
Sbjct: 315 PEHFPNPGSIE--------LDRPNPTSHLA-FGRGQHFCPGSALGRRHAQIGIEALLKKM 365
>pdb|1F26|A Chain A, Crystal Structure Of No Complex Of Thr243val Mutants Of
Cytochrome P450nor
Length = 402
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/180 (19%), Positives = 63/180 (35%), Gaps = 26/180 (14%)
Query: 302 EPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTF 361
+P + + D + +AG+ + I + L +P+ L + KA + A
Sbjct: 219 KPGNIDKSDAVQIAFLLLVAGNAVMVNMIALGVATLAQHPDQLAQLKANPSLA------- 271
Query: 362 EEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRD 421
++E R H + R A ED + + ++ + + RD
Sbjct: 272 -----------PQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRD 320
Query: 422 PEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQF 481
EV++ P F R K + + FG G C LA L + +L +F
Sbjct: 321 EEVFENPDEFNMNR--------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|3CXZ|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 R386l Mutant
From M. Tuberculosis
Length = 396
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 67/180 (37%), Gaps = 31/180 (17%)
Query: 304 AKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPE--SLNKAKAELAQAVGADRTF 361
+ VS++ + F AG +T S + AL L+ P+ +L K EL
Sbjct: 216 SHVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHEKPEL---------- 265
Query: 362 EEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRD 421
+ A ++E LR++ +PR A D + K VLV D
Sbjct: 266 ----------IPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFD 315
Query: 422 PEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQF 481
PE + P S + +D L FG G+ C G L R + + +LL +
Sbjct: 316 PEHFPNPGSIE--------LDRPNPTSHLA-FGRGQHFCPGSALGRRHAQIGIEALLKKM 366
>pdb|3OO3|A Chain A, Crystal Structure Of The Orf6 (Cyp165d3) Monooxygenase
Involved In Teicoplanin Biosynthesis
Length = 384
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 76/200 (38%), Gaps = 39/200 (19%)
Query: 284 KRKDFLDVMLDFEGNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPE- 342
KR+D D M+ ++ A++S+++L + +E ++ + A+ L+T+P+
Sbjct: 191 KRRDPGDGMIGV--IVREHGAEISDEELAGLAEGNLIMAAEQMAAQLAVAVLLLVTHPDQ 248
Query: 343 -SLNKAKAELAQAVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQ 401
+L + K EL + + +E LR + PR A+ D
Sbjct: 249 MALLREKPEL--------------------IDSATEEVLRHASIVEAPAPRVALADVRMA 288
Query: 402 GYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCA 461
G I + + A R P G D + + FG G C
Sbjct: 289 GRDIHAGDVLTCSMLATNRAP---------------GDRFDITREKATHMAFGHGIHHCI 333
Query: 462 GVPLAHRMLHLILGSLLHQF 481
G PLA L + L +++ +F
Sbjct: 334 GAPLARLQLRVALPAVVGRF 353
>pdb|3CXY|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 P346l
Mutant From M. Tuberculosis
Length = 396
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 67/180 (37%), Gaps = 31/180 (17%)
Query: 304 AKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPE--SLNKAKAELAQAVGADRTF 361
+ VS++ + F AG +T S + AL L+ P+ +L K EL
Sbjct: 216 SHVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHEKPEL---------- 265
Query: 362 EEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRD 421
+ A ++E LR++ +PR A D + K VLV D
Sbjct: 266 ----------IPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFD 315
Query: 422 PEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQF 481
PE + P S + +D L FG G+ C G L R + + +LL +
Sbjct: 316 PEHFPNPGSIE--------LDRPNPTSHLA-FGRGQHFCLGSALGRRHAQIGIEALLKKM 366
>pdb|3CY0|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 S237a Mutant
From Mycobacterium Tuberculosis
Length = 396
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 66/180 (36%), Gaps = 31/180 (17%)
Query: 304 AKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPE--SLNKAKAELAQAVGADRTF 361
+ VS++ + F AG T S + AL L+ P+ +L K EL
Sbjct: 216 SHVSDELFATIGVTFFGAGVIATGSFLTTALISLIQRPQLRNLLHEKPEL---------- 265
Query: 362 EEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRD 421
+ A ++E LR++ +PR A D + K VLV D
Sbjct: 266 ----------IPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFD 315
Query: 422 PEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQF 481
PE + P S + +D L FG G+ C G L R + + +LL +
Sbjct: 316 PEHFPNPGSIE--------LDRPNPTSHLA-FGRGQHFCPGSALGRRHAQIGIEALLKKM 366
>pdb|3O1A|A Chain A, Structure Of Oxye (Cyp165d3), A Cytochrome P450 Involved
In Teicoplanin Biosynthesis
Length = 417
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 76/200 (38%), Gaps = 39/200 (19%)
Query: 284 KRKDFLDVMLDFEGNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPE- 342
KR+D D M+ ++ A++S+++L + +E ++ + A+ L+T+P+
Sbjct: 224 KRRDPGDGMIGV--IVREHGAEISDEELAGLAEGNLIMAAEQMAAQLAVAVLLLVTHPDQ 281
Query: 343 -SLNKAKAELAQAVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQ 401
+L + K EL + + +E LR + PR A+ D
Sbjct: 282 MALLREKPEL--------------------IDSATEEVLRHASIVEAPAPRVALADVRMA 321
Query: 402 GYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCA 461
G I + + A R P G D + + FG G C
Sbjct: 322 GRDIHAGDVLTCSMLATNRAP---------------GDRFDITREKATHMAFGHGIHHCI 366
Query: 462 GVPLAHRMLHLILGSLLHQF 481
G PLA L + L +++ +F
Sbjct: 367 GAPLARLQLRVALPAVVGRF 386
>pdb|3CXV|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 A233g
Mutant From Mycobacterium Tuberculosis
Length = 396
Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 66/180 (36%), Gaps = 31/180 (17%)
Query: 304 AKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPE--SLNKAKAELAQAVGADRTF 361
+ VS++ + F G +T S + AL L+ P+ +L K EL
Sbjct: 216 SHVSDELFATIGVTFFGGGVISTGSFLTTALISLIQRPQLRNLLHEKPEL---------- 265
Query: 362 EEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRD 421
+ A ++E LR++ +PR A D + K VLV D
Sbjct: 266 ----------IPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFD 315
Query: 422 PEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQF 481
PE + P S + +D L FG G+ C G L R + + +LL +
Sbjct: 316 PEHFPNPGSIE--------LDRPNPTSHLA-FGRGQHFCPGSALGRRHAQIGIEALLKKM 366
>pdb|2YJN|B Chain B, Structure Of The Glycosyltransferase Eryciii From The
Erythromycin Biosynthetic Pathway, In Complex With Its
Activating Partner, Erycii
Length = 381
Score = 28.9 bits (63), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 66/178 (37%), Gaps = 23/178 (12%)
Query: 255 VGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVSEKDLNIF 314
G L++ F + Q V G + R D + + + V+E +
Sbjct: 152 AGARLDLVGDFAWQVPVQGMTAVLGAAGVLRGAAWDARVSLDAQLSPQQLAVTEAAVAAL 211
Query: 315 ----ILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDDIDNLP 370
L AG+E T++T+ + AV A+ E D+
Sbjct: 212 PADPALRALFAGAEMTANTV------------------VDAVLAVSAEPGLAERIADDPA 253
Query: 371 YLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEP 428
+ + E LRLHP + L R A + + I + +V+V A RDPEV+ EP
Sbjct: 254 AAQRTVAEVLRLHPAL-HLERRTATAEVRLGEHVIGEGEEVVVVVAAANRDPEVFAEP 310
>pdb|1WDI|A Chain A, Crystal Structure Of Tt0907 From Thermus Thermophilus Hb8
Length = 345
Score = 28.9 bits (63), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 9/84 (10%)
Query: 342 ESLNKAKAELAQAVGAD----RTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMED 397
E++N+AKAE + V R E + + + + L + PP F V D
Sbjct: 241 EAVNRAKAEGRRVVAVGTTVVRALESAYREGVGVVAGEGETRLFIRPPYTFKV-----VD 295
Query: 398 TNFQGYHIPKDTQVLVNAWAIGRD 421
F +H+P+ T +++ A +GR+
Sbjct: 296 ALFTNFHLPRSTLLMLVAAFLGRE 319
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.137 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,742,964
Number of Sequences: 62578
Number of extensions: 600349
Number of successful extensions: 2186
Number of sequences better than 100.0: 215
Number of HSP's better than 100.0 without gapping: 133
Number of HSP's successfully gapped in prelim test: 82
Number of HSP's that attempted gapping in prelim test: 1786
Number of HSP's gapped (non-prelim): 230
length of query: 515
length of database: 14,973,337
effective HSP length: 103
effective length of query: 412
effective length of database: 8,527,803
effective search space: 3513454836
effective search space used: 3513454836
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 54 (25.4 bits)