Query         036305
Match_columns 515
No_of_seqs    172 out of 1867
Neff          11.2
Searched_HMMs 46136
Date          Fri Mar 29 11:21:09 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036305.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/036305hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0 9.5E-86 2.1E-90  628.9  46.4  460   43-514    22-487 (489)
  2 PLN02687 flavonoid 3'-monooxyg 100.0 9.3E-79   2E-83  603.5  47.4  469   41-514    28-508 (517)
  3 KOG0158 Cytochrome P450 CYP3/C 100.0 3.3E-79 7.1E-84  574.1  41.3  463   36-515    20-499 (499)
  4 PLN02971 tryptophan N-hydroxyl 100.0 1.4E-78   3E-83  604.0  48.2  464   44-514    54-533 (543)
  5 PLN00110 flavonoid 3',5'-hydro 100.0 4.2E-78 9.1E-83  595.0  48.8  472   35-514    19-496 (504)
  6 PLN03234 cytochrome P450 83B1; 100.0 5.1E-78 1.1E-82  597.9  47.7  472   35-514    16-498 (499)
  7 PLN03112 cytochrome P450 famil 100.0 2.1E-77 4.6E-82  595.2  49.1  488   22-514     7-507 (514)
  8 PLN02183 ferulate 5-hydroxylas 100.0 1.8E-77 3.9E-82  594.2  47.3  466   43-514    32-511 (516)
  9 PTZ00404 cytochrome P450; Prov 100.0 1.4E-76 3.1E-81  585.1  46.5  456   38-514    20-482 (482)
 10 PLN02394 trans-cinnamate 4-mon 100.0 4.1E-76 8.8E-81  584.9  48.7  470   38-515    21-502 (503)
 11 PLN02966 cytochrome P450 83A1  100.0 4.7E-76   1E-80  582.7  46.3  466   41-514    23-499 (502)
 12 PLN00168 Cytochrome P450; Prov 100.0 1.9E-75 4.1E-80  580.2  49.5  468   44-515    32-517 (519)
 13 PLN02290 cytokinin trans-hydro 100.0 1.3E-74 2.8E-79  575.5  40.3  456   41-515    36-515 (516)
 14 KOG0157 Cytochrome P450 CYP4/C 100.0 1.3E-74 2.8E-79  565.0  38.9  454   45-515    33-496 (497)
 15 KOG0159 Cytochrome P450 CYP11/ 100.0 1.5E-74 3.3E-79  529.0  35.9  454   44-515    47-518 (519)
 16 PLN02655 ent-kaurene oxidase   100.0 1.5E-73 3.2E-78  559.6  43.5  450   49-514     1-463 (466)
 17 KOG0684 Cytochrome P450 [Secon 100.0 2.1E-74 4.6E-79  514.4  33.6  444   47-515    31-485 (486)
 18 PLN03018 homomethionine N-hydr 100.0 2.3E-72 4.9E-77  554.8  48.0  463   45-514    38-523 (534)
 19 PLN02500 cytochrome P450 90B1  100.0 8.9E-73 1.9E-77  558.1  39.4  440   41-513    32-488 (490)
 20 PLN02774 brassinosteroid-6-oxi 100.0 1.1E-72 2.4E-77  552.9  35.7  431   44-513    28-462 (463)
 21 PF00067 p450:  Cytochrome P450 100.0 1.4E-73   3E-78  566.8  29.1  452   49-511     1-463 (463)
 22 PLN03195 fatty acid omega-hydr 100.0 1.9E-71 4.1E-76  552.3  40.0  455   48-515    31-516 (516)
 23 PLN02169 fatty acid (omega-1)- 100.0 7.4E-71 1.6E-75  542.4  41.7  450   47-514    31-499 (500)
 24 PLN02196 abscisic acid 8'-hydr 100.0   5E-71 1.1E-75  540.7  37.7  432   39-514    27-462 (463)
 25 PLN03141 3-epi-6-deoxocathaste 100.0 3.2E-70 6.9E-75  534.4  36.5  438   43-515     3-450 (452)
 26 PLN02987 Cytochrome P450, fami 100.0 2.2E-69 4.7E-74  526.8  40.1  441   37-515    20-469 (472)
 27 PLN02738 carotene beta-ring hy 100.0 5.7E-69 1.2E-73  535.9  41.0  453   44-514   112-594 (633)
 28 PLN02302 ent-kaurenoic acid ox 100.0 9.4E-69   2E-73  532.2  41.6  439   43-515    38-488 (490)
 29 PLN02936 epsilon-ring hydroxyl 100.0 9.6E-68 2.1E-72  520.6  38.9  449   48-515    13-482 (489)
 30 PLN02426 cytochrome P450, fami 100.0 2.5E-66 5.3E-71  509.3  41.5  436   55-515    49-500 (502)
 31 PLN02648 allene oxide synthase 100.0 2.3E-59 4.9E-64  452.5  28.7  397   45-487    15-461 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 3.2E-53 6.9E-58  405.4  31.2  383   68-514    24-410 (411)
 33 PF08492 SRP72:  SRP72 RNA-bind  66.1     3.8 8.2E-05   26.7   1.3    7  432-438    44-50  (59)
 34 PHA02681 ORF089 virion membran  58.9      59  0.0013   22.7   6.8    9   69-77     54-62  (92)
 35 KOG3653 Transforming growth fa  56.9      51  0.0011   32.1   7.4   47   67-113   210-257 (534)
 36 PF12554 MOZART1:  Mitotic-spin  50.9      45 0.00099   20.8   4.1   43  309-351     5-47  (48)
 37 PF09201 SRX:  SRX;  InterPro:   45.6      20 0.00044   27.9   2.4   23  458-480    18-40  (148)
 38 PRK06789 flagellar motor switc  44.1      19 0.00041   24.9   1.9   39  376-414    22-62  (74)
 39 PF15330 SIT:  SHP2-interacting  41.9      65  0.0014   24.3   4.6   12   54-65     45-56  (107)
 40 PF01102 Glycophorin_A:  Glycop  41.1      54  0.0012   25.3   4.2    7   34-40     84-90  (122)
 41 TIGR00847 ccoS cytochrome oxid  40.0      97  0.0021   19.6   4.5   20   20-39      5-24  (51)
 42 PF15050 SCIMP:  SCIMP protein   40.0      99  0.0021   23.5   5.1   17   45-61     66-83  (133)
 43 PF05952 ComX:  Bacillus compet  39.8      28 0.00062   22.5   2.1   24  333-356     5-28  (57)
 44 COG0851 MinE Septum formation   36.7      68  0.0015   22.9   3.7   42  316-357     4-52  (88)
 45 PHA03049 IMV membrane protein;  33.3 1.3E+02  0.0029   20.0   4.3   20   41-60     25-44  (68)
 46 PHA01327 hypothetical protein   28.9      35 0.00076   20.0   1.1   21  128-148    10-30  (49)
 47 KOG3506 40S ribosomal protein   27.9      28  0.0006   22.1   0.6   11  451-461    12-22  (56)
 48 PF14129 DUF4296:  Domain of un  27.7 2.3E+02   0.005   20.3   6.2   49  307-355    30-78  (87)
 49 PLN02196 abscisic acid 8'-hydr  26.6 1.1E+02  0.0023   30.5   4.9   28   29-56     14-41  (463)
 50 PF12508 DUF3714:  Protein of u  26.5      43 0.00094   28.6   1.8   43  369-413    52-94  (200)
 51 PRK02302 hypothetical protein;  26.5 1.6E+02  0.0034   21.3   4.2   32   76-107    23-54  (89)
 52 COG1759 5-formaminoimidazole-4  25.5 1.2E+02  0.0026   27.9   4.3   69  374-475   277-352 (361)
 53 TIGR03779 Bac_Flav_CT_M Bacter  25.2      13 0.00028   35.5  -1.7   44  369-414   255-298 (410)
 54 PF12444 Sox_N:  Sox developmen  24.6      54  0.0012   23.3   1.7   20  468-487    60-79  (84)
 55 PF11227 DUF3025:  Protein of u  23.8      42  0.0009   28.7   1.2   24  412-435   187-211 (212)
 56 PRK02886 hypothetical protein;  23.7   2E+02  0.0043   20.7   4.3   32   76-107    21-52  (87)
 57 PLN03134 glycine-rich RNA-bind  23.2 3.1E+02  0.0066   22.0   6.0   49   57-107    38-95  (144)
 58 PF09926 DUF2158:  Uncharacteri  22.6      84  0.0018   20.1   2.1   18   79-96      3-20  (53)
 59 PF13625 Helicase_C_3:  Helicas  22.3 2.3E+02  0.0051   22.1   5.1   38   69-108    77-114 (129)
 60 PF14483 Cut8_M:  Cut8 dimerisa  22.2 1.5E+02  0.0033   17.4   2.9   12  338-349    24-35  (38)
 61 PF09902 DUF2129:  Uncharacteri  21.7 2.3E+02   0.005   19.5   4.2   31   77-107    18-48  (71)
 62 PRK14740 kdbF potassium-transp  21.3 1.5E+02  0.0034   16.0   3.4   14   16-29      1-14  (29)
 63 PF13993 YccJ:  YccJ-like prote  21.0 1.3E+02  0.0028   19.7   2.6   31  320-350     8-39  (69)
 64 PF05781 MRVI1:  MRVI1 protein;  21.0 1.4E+02   0.003   29.7   4.2   19   36-54    496-514 (538)
 65 PRK13991 cell division topolog  20.2 2.2E+02  0.0048   20.5   4.0   18  340-357    35-52  (87)
 66 PRK00400 hisE phosphoribosyl-A  20.1 3.9E+02  0.0084   20.1   7.1   79  260-355     6-92  (105)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=9.5e-86  Score=628.89  Aligned_cols=460  Identities=40%  Similarity=0.752  Sum_probs=406.4

Q ss_pred             CCCCCCCCCCCCCCeeeeccCCCCC-chHHHHHHHHHhCCeeEEecCCeeEEEecCHHHHHHHHHhcCcccCCCCC-ccc
Q 036305           43 SRPKQHPPGPPGWPIIGNMFDLGTV-PHRTLTELRQKYGDVIWLKFGAINTMVILSAKAATDFFKNHDSTFAERKV-TET  120 (515)
Q Consensus        43 ~~~~~~pPgp~~~p~iG~~~~~~~~-~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~-~~~  120 (515)
                      .++.+.||||+++|+|||++++... ++..+++|.++||++|++|+|..++|+|+|++.++|++++++..|++|+. ...
T Consensus        22 ~~~~~lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~  101 (489)
T KOG0156|consen   22 RKRRNLPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTAT  101 (489)
T ss_pred             cCCCCCCcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhh
Confidence            3347899999999999999999886 99999999999999999999999999999999999999999999999997 224


Q ss_pred             eeeeecCCcccccCCCChHHHHHHHhHHhhhcchHHHHHcHHHHHHHHHHHHHHHHH-hc-CCcchHHHHHHHHHHHHHH
Q 036305          121 MRVHGYDKSSLALAPYGAFWRVLRRLVTVEMLVTKRINETASVRRKCVNDMLLWIEQ-EA-SGVHVARLVFLSTFNLLGN  198 (515)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~w~~~R~~l~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~-~~-~~vd~~~~~~~~~~~~i~~  198 (515)
                      .....+++.+++++++|+.|+.+||+....+++...++.+...-.++++.+++.+.+ .. .++|+...+..++.++|++
T Consensus       102 ~~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~~~~~~~vdl~~~l~~~~~nvI~~  181 (489)
T KOG0156|consen  102 LKYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSKSKKGEPVDLSELLDLLVGNVICR  181 (489)
T ss_pred             HHHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHhcCCCceeeHHHHHHHHHHHHHHH
Confidence            466666789999999999999999999989999999999988889999999999986 11 3899999999999999999


Q ss_pred             HHhhhccccccCCchHHHHHHHHHHHHHhcCCCcccccc-cccccC-chhHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 036305          199 LMLSRDLLDRESNDGAEFFQAMMGLMEWSGHANLADFFP-ILRRLD-PQGLRRKMERDVGKALEIASKFVKERLEQKDKN  276 (515)
Q Consensus       199 ~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  276 (515)
                      ++||+++...+.+...++.+.+.+.....+.....+++| ++.++. .....+.......++.+++++.|+++.++. . 
T Consensus       182 ~~fG~rf~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~~-~-  259 (489)
T KOG0156|consen  182 MLFGRRFEEEDEEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREKI-G-  259 (489)
T ss_pred             HHhCCccccCCchHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhh-c-
Confidence            999999965444556679999999999999888999999 676663 224566666777779999999999988433 1 


Q ss_pred             cCCCCccccccHHHHHHhcccCCCCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhc
Q 036305          277 VTGTSDEKRKDFLDVMLDFEGNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVG  356 (515)
Q Consensus       277 ~~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~  356 (515)
                          . ++..|+++.+++..+++...+  ++++++.+.+.++++||+|||++++.|++.+|++||++|+|+++||++++|
T Consensus       260 ----~-~~~~D~vD~lL~~~~~~~~~~--~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~vvG  332 (489)
T KOG0156|consen  260 ----D-EEGRDFVDALLKLMKEEKAEG--LTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDEVVG  332 (489)
T ss_pred             ----c-CCCCcHHHHHHHhhcccccCC--CCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC
Confidence                1 223899999999876543222  999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCcccCCCChhHHHHHHhhccCCCCCcCCCcccccccccccceecCCCCEEEeehhhhcCCCCCCCCCCCCCCCCC
Q 036305          357 ADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPERF  436 (515)
Q Consensus       357 ~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~  436 (515)
                      .++.++.+|+.+||||+|+|+|++|+||++|+.++|.+++|+.|+||.||+||.|.++.|++|+||++|+||++|+||||
T Consensus       333 ~~r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF~PERF  412 (489)
T KOG0156|consen  333 KGRLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPEEFKPERF  412 (489)
T ss_pred             CCCCCChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCccCCCccccChhhh
Confidence            88779999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCccCCCcceeccCCCCCCCCCHHHHHHHHHHHHHHHHhhceeeeCCCccccccccccceeeccCCeeeeeccC
Q 036305          437 LGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDWELDCKEEIDMNDRMGITVRKAEPLIAVPKRC  514 (515)
Q Consensus       437 l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  514 (515)
                      ++.+ +.++....++|||.|+|+|||..+|.+|+.++++.||++|||+.+++ ++++... +++...+.|+.+...+|
T Consensus       413 l~~~-d~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~-~~d~~e~-~~~~~~~~pl~~~~~~r  487 (489)
T KOG0156|consen  413 LDSN-DGKGLDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG-KVDMEEA-GLTLKKKKPLKAVPVPR  487 (489)
T ss_pred             cCCc-cccCCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC-CCCCccc-ccceecCCcceeeeecC
Confidence            9974 33345678999999999999999999999999999999999999854 5566655 47788888888887766


No 2  
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=9.3e-79  Score=603.55  Aligned_cols=469  Identities=38%  Similarity=0.737  Sum_probs=383.4

Q ss_pred             hcCCCCCCCCCCCCCCeeeeccCCCCCchHHHHHHHHHhCCeeEEecCCeeEEEecCHHHHHHHHHhcCcccCCCCCccc
Q 036305           41 KSSRPKQHPPGPPGWPIIGNMFDLGTVPHRTLTELRQKYGDVIWLKFGAINTMVILSAKAATDFFKNHDSTFAERKVTET  120 (515)
Q Consensus        41 ~~~~~~~~pPgp~~~p~iG~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~  120 (515)
                      .++++.+.||||+++|++||++.+..+++.++.+++++||++|++++|+.++++++||+.+++++.++...|.+++....
T Consensus        28 ~~~~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~~~  107 (517)
T PLN02687         28 SGKHKRPLPPGPRGWPVLGNLPQLGPKPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPNSG  107 (517)
T ss_pred             CCCCCCCCCccCCCCCccccHHhcCCchhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCCccc
Confidence            44455678999999999999988888899999999999999999999999999999999999999987777877764333


Q ss_pred             eeeeecCCcccccCCCChHHHHHHHhHHhhhcchHHHHHcHHHHHHHHHHHHHHHHHhc--CCcchHHHHHHHHHHHHHH
Q 036305          121 MRVHGYDKSSLALAPYGAFWRVLRRLVTVEMLVTKRINETASVRRKCVNDMLLWIEQEA--SGVHVARLVFLSTFNLLGN  198 (515)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~w~~~R~~l~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~--~~vd~~~~~~~~~~~~i~~  198 (515)
                      .......+.+++++.+|+.|+++|+.+.++.|+.++++.+.+.+.++++.+++.|.+..  +++|+.+++..+++|+++.
T Consensus       108 ~~~~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~vd~~~~~~~~t~dvi~~  187 (517)
T PLN02687        108 AEHMAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQHGTAPVNLGQLVNVCTTNALGR  187 (517)
T ss_pred             hhhhccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHH
Confidence            22222224466777789999999999976789999999999999999999999997642  2799999999999999999


Q ss_pred             HHhhhcccccc-CCchHHHHHHHHHHHHHhcCCCcccccccccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 036305          199 LMLSRDLLDRE-SNDGAEFFQAMMGLMEWSGHANLADFFPILRRLDPQGLRRKMERDVGKALEIASKFVKERLEQKDKNV  277 (515)
Q Consensus       199 ~~fg~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  277 (515)
                      ++||.++.+.+ ++....+.+.+..+............+|++.++.+....++..+..+.+.+++.+.++++++....  
T Consensus       188 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~--  265 (517)
T PLN02687        188 AMVGRRVFAGDGDEKAREFKEMVVELMQLAGVFNVGDFVPALRWLDLQGVVGKMKRLHRRFDAMMNGIIEEHKAAGQT--  265 (517)
T ss_pred             HHhCccccccCCcchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHHhccc--
Confidence            99999985432 233456777776666544433333566766554332234556667788888999999888733211  


Q ss_pred             CCCCccccccHHHHHHhcccCC--CCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHHh
Q 036305          278 TGTSDEKRKDFLDVMLDFEGNG--KDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAV  355 (515)
Q Consensus       278 ~~~~~~~~~d~l~~ll~~~~~~--~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~  355 (515)
                         .+....|+++.+++..++.  ...+..++++++.+++..+++||+|||+++++|++++|++||++|+++++||+++.
T Consensus       266 ---~~~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~  342 (517)
T PLN02687        266 ---GSEEHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVV  342 (517)
T ss_pred             ---cCcccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHc
Confidence               1124569999999865431  11234699999999999999999999999999999999999999999999999998


Q ss_pred             cCCCCCCcccCCCChhHHHHHHhhccCCCCCcCCCcccccccccccceecCCCCEEEeehhhhcCCCCCCCCCCCCCCCC
Q 036305          356 GADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPER  435 (515)
Q Consensus       356 ~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R  435 (515)
                      +.++.++++++.+||||+|||+|+||++|+++..++|.+.+|++++||.||+|+.|.++.+.+|+||++|+||++|+|||
T Consensus       343 ~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~F~PeR  422 (517)
T PLN02687        343 GRDRLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVNVWAIARDPEQWPDPLEFRPDR  422 (517)
T ss_pred             CCCCCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEEecHHhcCCcccCCCcccCCchh
Confidence            87778999999999999999999999999999877899999999999999999999999999999999999999999999


Q ss_pred             CCCCCCC----ccCCCcceeccCCCCCCCCCHHHHHHHHHHHHHHHHhhceeeeC-CCc--cccccccccceeeccCCee
Q 036305          436 FLGSTVD----YKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDWELD-CKE--EIDMNDRMGITVRKAEPLI  508 (515)
Q Consensus       436 ~l~~~~~----~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~f~~~~~-~~~--~~~~~~~~~~~~~~~~~~~  508 (515)
                      |++....    ....+..++|||+|+|.|+|++||++|+++++++||++|+|+++ +..  ++......+++..+..+++
T Consensus       423 fl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  502 (517)
T PLN02687        423 FLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADGQTPDKLNMEEAYGLTLQRAVPLM  502 (517)
T ss_pred             cCCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCCCCcccCCcccccceeeecCCCeE
Confidence            9974321    11234579999999999999999999999999999999999987 322  2333334567777778999


Q ss_pred             eeeccC
Q 036305          509 AVPKRC  514 (515)
Q Consensus       509 v~~~~r  514 (515)
                      |++++|
T Consensus       503 ~~~~~R  508 (517)
T PLN02687        503 VHPRPR  508 (517)
T ss_pred             EeeccC
Confidence            999887


No 3  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=3.3e-79  Score=574.06  Aligned_cols=463  Identities=25%  Similarity=0.396  Sum_probs=365.2

Q ss_pred             HHHHHhcCCCCCCCCCCCCCCeeeeccCCCC--CchHHHHHHHHHhCCeeEEecCCeeEEEecCHHHHHHHHHhcCcccC
Q 036305           36 LLLRIKSSRPKQHPPGPPGWPIIGNMFDLGT--VPHRTLTELRQKYGDVIWLKFGAINTMVILSAKAATDFFKNHDSTFA  113 (515)
Q Consensus        36 ~~~~~~~~~~~~~pPgp~~~p~iG~~~~~~~--~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~i~~~~~~~~~  113 (515)
                      ++.+...++..+.+|+|+++|++||+..+.+  .+.....+...++|+++.++.+.++.++|+||+.+++|+.++.++|.
T Consensus        20 ~~~~~~~yw~rrGi~~~~p~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~ik~F~~F~   99 (499)
T KOG0158|consen   20 WLRWTYSYWRRRGIPGPKPLPFLGNLPGMLKRERPGDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEILIKDFDNFY   99 (499)
T ss_pred             HHHhhhhhhccCCCCCCCCCCcEecHHHHHhccCcHHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHHHHhCccCc
Confidence            3344444677789999999999999988743  33444444444459999999999999999999999999999988998


Q ss_pred             CC--CCccceeeeecCCcccccCCCChHHHHHHHhHHhhhcchHHHHHcHHHHHHHHHHHHHHHHHhcC---CcchHHHH
Q 036305          114 ER--KVTETMRVHGYDKSSLALAPYGAFWRVLRRLVTVEMLVTKRINETASVRRKCVNDMLLWIEQEAS---GVHVARLV  188 (515)
Q Consensus       114 ~~--~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~l~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~---~vd~~~~~  188 (515)
                      ++  +....... .. ....++...|+.||++|..++ |.|++.+++++.+.+.+.++++++.+++...   .+++.+.+
T Consensus       100 ~r~~~~~~d~~~-~l-~~~~Lf~~~g~~WK~lR~~ls-P~Fts~kmk~m~~t~~~~~~~l~~~l~~~~~~~~~~~~~dl~  176 (499)
T KOG0158|consen  100 NRKRPIYGDPED-PL-SALNLFFLRGERWKRLRTKLS-PTFTSGKLKKMFPTMEEVGDELVRHLRRKSEGGQEGEIKDLC  176 (499)
T ss_pred             CCCCCCcCCCCC-cc-cccCchhccCchHHHHHHhhc-cccchhhHHHHHHHHHHHHHHHHHHHHHhhcccCCccHHHHH
Confidence            84  33222221 11 234456667999999999998 9999999999999999999999999998765   89999999


Q ss_pred             HHHHHHHHHHHHhhhccccccCCchHHHHHHHHHHHHH-hcCCCc----ccccccccccCchhHHHHHHHHHHHHHHHHH
Q 036305          189 FLSTFNLLGNLMLSRDLLDRESNDGAEFFQAMMGLMEW-SGHANL----ADFFPILRRLDPQGLRRKMERDVGKALEIAS  263 (515)
Q Consensus       189 ~~~~~~~i~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~  263 (515)
                      ..+|.|+|++++||.+.++..+ ...++.......... .....+    ...+|.+...      -+......+..+++.
T Consensus       177 ~~yT~DVI~~~AfG~~~~s~~d-~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~------l~~~~~~~~~~~~~~  249 (499)
T KOG0158|consen  177 ARYTTDVIGSCAFGLDANSLRD-PKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALP------LRVKLFPEDVTDFFR  249 (499)
T ss_pred             HHHHHHHHhHhhcccchhhhcC-chHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHh------hhcccChHHHHHHHH
Confidence            9999999999999999977653 334555444444333 211111    1122322111      011222334444555


Q ss_pred             HHHHHHHHhhccccCCCCccccccHHHHHHhcccC--CCCCCC-CCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhC
Q 036305          264 KFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFEGN--GKDEPA-KVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTN  340 (515)
Q Consensus       264 ~~i~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~--~~~~~~-~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~  340 (515)
                      +.+.++++.+..     ....+.|+++.+++...+  ...+.. .++.+|++++++.|++||.||||+++++++|+|++|
T Consensus       250 ~~v~~~v~~R~~-----~~~~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf~lYeLA~~  324 (499)
T KOG0158|consen  250 KLVNSRVEQREK-----ENIERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSFALYELAKN  324 (499)
T ss_pred             HHHHHHHHHHHh-----cCCCCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhcC
Confidence            555555433211     334788999999998753  111122 599999999999999999999999999999999999


Q ss_pred             chHHHHHHHHHHHHhcCCCCCCcccCCCChhHHHHHHhhccCCCCCcCCCccccccccccc-ceecCCCCEEEeehhhhc
Q 036305          341 PESLNKAKAELAQAVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQ-GYHIPKDTQVLVNAWAIG  419 (515)
Q Consensus       341 p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~-g~~ip~G~~v~~~~~~~~  419 (515)
                      |++|+|||+||+++..+...+++|.+.+|+||++||+||||+||+++. +.|.+++|++++ ++.||+|+.|.++.+++|
T Consensus       325 PdvQ~kLreEI~~~~~~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~-~~R~C~k~~~i~~~~~i~kG~~V~Ip~~alH  403 (499)
T KOG0158|consen  325 PDVQDKLREEIDEVLEEKEGLTYDSLSKLKYLDMVIKETLRLYPPAPF-LNRECTKDYEIPGGFVIPKGTPVMIPTYALH  403 (499)
T ss_pred             hHHHHHHHHHHHHHhcccCCCCHHHHhCCcHHHHHHHHHHhhCCCccc-ccceecCceecCCCeEeCCCCEEEeeccccc
Confidence            999999999999997765559999999999999999999999999999 789999999999 999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCccCCCcceeccCCCCCCCCCHHHHHHHHHHHHHHHHhhceeeeCCCcccccc-cccc
Q 036305          420 RDPEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDWELDCKEEIDMN-DRMG  498 (515)
Q Consensus       420 ~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~~~~~~-~~~~  498 (515)
                      |||++||||++|+||||.+++.+ ..++..|+|||.|+|.|+|.+||.+|+|+.+++||++|+++.+....+... ...+
T Consensus       404 ~Dp~~~p~Pe~F~PERF~~~~~~-~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~~t~~~~~~~~~~  482 (499)
T KOG0158|consen  404 HDPEYWPEPEKFKPERFEEENNK-SRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCPTTIIPLEGDPKG  482 (499)
T ss_pred             CCcccCCCcccCCCccCCCCccc-ccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCCcccCcccCCccc
Confidence            99999999999999999977644 446789999999999999999999999999999999999998842111221 1237


Q ss_pred             ceeeccCCeeeeeccCC
Q 036305          499 ITVRKAEPLIAVPKRCK  515 (515)
Q Consensus       499 ~~~~~~~~~~v~~~~r~  515 (515)
                      .+..|+.++++++++|+
T Consensus       483 ~~l~pk~gi~Lkl~~r~  499 (499)
T KOG0158|consen  483 FTLSPKGGIWLKLEPRD  499 (499)
T ss_pred             eeeecCCceEEEEEeCC
Confidence            88999999999999985


No 4  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=1.4e-78  Score=603.98  Aligned_cols=464  Identities=26%  Similarity=0.520  Sum_probs=369.3

Q ss_pred             CCCCCCCCCCCCCeeeeccCCCCC--chHHHHHHHHHhC-CeeEEecCCeeEEEecCHHHHHHHHHhcCcccCCCCCccc
Q 036305           44 RPKQHPPGPPGWPIIGNMFDLGTV--PHRTLTELRQKYG-DVIWLKFGAINTMVILSAKAATDFFKNHDSTFAERKVTET  120 (515)
Q Consensus        44 ~~~~~pPgp~~~p~iG~~~~~~~~--~~~~~~~~~~kyG-~v~~i~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~  120 (515)
                      ++.+.||||+++|++||++.+.++  .+.++.++.++|| ++|++++|+.++++|+||+.+++++.++...|.+++....
T Consensus        54 r~~~lPPGP~~lPiiGnl~~l~~~~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~~  133 (543)
T PLN02971         54 KLHPLPPGPTGFPIVGMIPAMLKNRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTYA  133 (543)
T ss_pred             CCCCCCcCCCCCCcccchHHhccCCcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCcccc
Confidence            456789999999999999887543  3678999999999 7999999999999999999999999998888888875433


Q ss_pred             eeeeecCCcccccCCCChHHHHHHHhHHhhhcchHHHHHcHHHHHHHHHHHHHHHHHhc---CCcchHHHHHHHHHHHHH
Q 036305          121 MRVHGYDKSSLALAPYGAFWRVLRRLVTVEMLVTKRINETASVRRKCVNDMLLWIEQEA---SGVHVARLVFLSTFNLLG  197 (515)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~w~~~R~~l~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~---~~vd~~~~~~~~~~~~i~  197 (515)
                      ....+.+..++++..+|+.|+++||++.++++++..++.+.+.+.++++.+++++.+..   +++|+.+.+..+++++++
T Consensus       134 ~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~  213 (543)
T PLN02971        134 QKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVKNSEPVDLRFVTRHYCGNAIK  213 (543)
T ss_pred             hhhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceehHHHHHHHHHHHHH
Confidence            33333222345788889999999999986778877777888899999999988886532   279999999999999999


Q ss_pred             HHHhhhcccccc----CCchHHHHHHHHHHHHHhc---CCCcccccccccccCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 036305          198 NLMLSRDLLDRE----SNDGAEFFQAMMGLMEWSG---HANLADFFPILRRLDPQGLRRKMERDVGKALEIASKFVKERL  270 (515)
Q Consensus       198 ~~~fg~~~~~~~----~~~~~~~~~~~~~~~~~~~---~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  270 (515)
                      .++||.++.+..    ++...+..+.+...+....   ...+.+++|+++++......+...+..+.+.+++.+.+++++
T Consensus       214 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  293 (543)
T PLN02971        214 RLMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRESSAIMDKYHDPIIDERI  293 (543)
T ss_pred             HHHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999874321    1112233334444433221   112335567665542122334455567778888888888876


Q ss_pred             HhhccccCCCCccccccHHHHHHhcccCCCCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHH
Q 036305          271 EQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAE  350 (515)
Q Consensus       271 ~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~E  350 (515)
                      +...+.    ......|+++.+++..+++.  ...++++++.+++.++++||+|||+++++|++++|++||++|+|+++|
T Consensus       294 ~~~~~~----~~~~~~d~l~~ll~~~~~~~--~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~E  367 (543)
T PLN02971        294 KMWREG----KRTQIEDFLDIFISIKDEAG--QPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEE  367 (543)
T ss_pred             HHHhcc----CCCCCcCHHHHHHhhhcccC--CCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence            322111    11124699999998643221  114999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCCcccCCCChhHHHHHHhhccCCCCCcCCCcccccccccccceecCCCCEEEeehhhhcCCCCCCCCCCC
Q 036305          351 LAQAVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPWS  430 (515)
Q Consensus       351 i~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~  430 (515)
                      |++++++++.++++++.+|||++|||+|+||++|+++..++|.+.+|++++||.||||+.|.++.|.+||||++|+||++
T Consensus       368 I~~v~g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~dP~~  447 (543)
T PLN02971        368 IDRVVGKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLS  447 (543)
T ss_pred             HHHHhCCCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEEEECcHHhcCChhhCCCccc
Confidence            99999877789999999999999999999999999998788999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCC--ccCCCcceeccCCCCCCCCCHHHHHHHHHHHHHHHHhhceeeeC-CCccccccccccceeeccCCe
Q 036305          431 FKPERFLGSTVD--YKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDWELD-CKEEIDMNDRMGITVRKAEPL  507 (515)
Q Consensus       431 F~p~R~l~~~~~--~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~  507 (515)
                      |+||||+++..+  ...++..++|||+|+|.|+|++||++|+++++++||++|+|+++ +...+.+....+ ++..+.++
T Consensus       448 F~PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~-~~~~~~~~  526 (543)
T PLN02971        448 FKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSETRVELMESSH-DMFLSKPL  526 (543)
T ss_pred             cCcccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCCCCCcchhhhcC-cccccccc
Confidence            999999975322  12234679999999999999999999999999999999999987 444556655556 66556689


Q ss_pred             eeeeccC
Q 036305          508 IAVPKRC  514 (515)
Q Consensus       508 ~v~~~~r  514 (515)
                      .|.+++|
T Consensus       527 ~~~~~~~  533 (543)
T PLN02971        527 VMVGELR  533 (543)
T ss_pred             eeeeeec
Confidence            9999887


No 5  
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=4.2e-78  Score=595.00  Aligned_cols=472  Identities=35%  Similarity=0.684  Sum_probs=385.1

Q ss_pred             HHHHHHhcCCCCCCCCCCCCCCeeeeccCCCCCchHHHHHHHHHhCCeeEEecCCeeEEEecCHHHHHHHHHhcCcccCC
Q 036305           35 LLLLRIKSSRPKQHPPGPPGWPIIGNMFDLGTVPHRTLTELRQKYGDVIWLKFGAINTMVILSAKAATDFFKNHDSTFAE  114 (515)
Q Consensus        35 ~~~~~~~~~~~~~~pPgp~~~p~iG~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~i~~~~~~~~~~  114 (515)
                      +++.+....++.+.||||+++|++||++.+..+++.++.+++++||++|++++|+.++++|+||+.+++++.++...|++
T Consensus        19 ~~~~~~~~~~~~~~pPgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~vl~~~~~~f~~   98 (504)
T PLN00110         19 FFIRSLLPKPSRKLPPGPRGWPLLGALPLLGNMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAFLKTLDINFSN   98 (504)
T ss_pred             HHHHHHhhcccCCCcccCCCCCeeechhhcCCchHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcchhhcC
Confidence            34444555667789999999999999988877789999999999999999999999999999999999999988778887


Q ss_pred             CCCccceeeeecCCcccccCCCChHHHHHHHhHHhhhcchHHHHHcHHHHHHHHHHHHHHHHHhc---CCcchHHHHHHH
Q 036305          115 RKVTETMRVHGYDKSSLALAPYGAFWRVLRRLVTVEMLVTKRINETASVRRKCVNDMLLWIEQEA---SGVHVARLVFLS  191 (515)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~l~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~---~~vd~~~~~~~~  191 (515)
                      ++..........++.+++++.+|+.|+++|+.+..+.|+++.++.+.+.+.+++..+++.+.+..   +++|+.+++..+
T Consensus        99 r~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~  178 (504)
T PLN00110         99 RPPNAGATHLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLELSQRGEPVVVPEMLTFS  178 (504)
T ss_pred             CCCccchhhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHhccCCCcEeHHHHHHHH
Confidence            76543322222334556677789999999999985689999999999999999999998886632   278999999999


Q ss_pred             HHHHHHHHHhhhccccccCCchHHHHHHHHHHHHHhcCCCcccccccccccCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036305          192 TFNLLGNLMLSRDLLDRESNDGAEFFQAMMGLMEWSGHANLADFFPILRRLDPQGLRRKMERDVGKALEIASKFVKERLE  271 (515)
Q Consensus       192 ~~~~i~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  271 (515)
                      ++|+++.++||.++.........++.+.+...............+|++.++......+...+..+.+.+++.+.++++++
T Consensus       179 ~~~vi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  258 (504)
T PLN00110        179 MANMIGQVILSRRVFETKGSESNEFKDMVVELMTTAGYFNIGDFIPSIAWMDIQGIERGMKHLHKKFDKLLTRMIEEHTA  258 (504)
T ss_pred             HHHHHHHHHhCCcccccCchhHHHHHHHHHHHHHHhccccHHHHcchHhhhCcchHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999987322223345677777766654433333456676655422223455566677788888888887763


Q ss_pred             hhccccCCCCccccccHHHHHHhcccCCCCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHH
Q 036305          272 QKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAEL  351 (515)
Q Consensus       272 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei  351 (515)
                      ...      ......|+++.+++..++.  ++..++.+++.++++.+++||+|||+++++|++++|++||++|+++++|+
T Consensus       259 ~~~------~~~~~~d~l~~ll~~~~~~--~~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei  330 (504)
T PLN00110        259 SAH------ERKGNPDFLDVVMANQENS--TGEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEM  330 (504)
T ss_pred             hcc------ccccCCChhhHHhhccccc--CCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence            221      1123468999999764321  13469999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCCCcccCCCChhHHHHHHhhccCCCCCcCCCcccccccccccceecCCCCEEEeehhhhcCCCCCCCCCCCC
Q 036305          352 AQAVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPWSF  431 (515)
Q Consensus       352 ~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F  431 (515)
                      +++++.++.++++++++||||+|||+|+||++|++++.++|.+.+|++++||.||+|+.|.++.+.+|+||++|+||++|
T Consensus       331 ~~~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~h~d~~~~~dP~~F  410 (504)
T PLN00110        331 DQVIGRNRRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIWAIGRDPDVWENPEEF  410 (504)
T ss_pred             HHHhCCCCCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEeHHHhcCChhhcCCcccC
Confidence            99998767799999999999999999999999999987789999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCc---cCCCcceeccCCCCCCCCCHHHHHHHHHHHHHHHHhhceeeeCCCccccccccccceeeccCCee
Q 036305          432 KPERFLGSTVDY---KGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDWELDCKEEIDMNDRMGITVRKAEPLI  508 (515)
Q Consensus       432 ~p~R~l~~~~~~---~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  508 (515)
                      +||||+++....   ..+...++|||+|+|.|+|++||++|+++++++||++|||++.+..+.......++++.++.+++
T Consensus       411 ~PeRfl~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  490 (504)
T PLN00110        411 RPERFLSEKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDGVELNMDEAFGLALQKAVPLS  490 (504)
T ss_pred             CcccccCCCCcccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCCCccCcccccccccccCCCce
Confidence            999999653211   11234799999999999999999999999999999999999874334443334678888989999


Q ss_pred             eeeccC
Q 036305          509 AVPKRC  514 (515)
Q Consensus       509 v~~~~r  514 (515)
                      |++++|
T Consensus       491 ~~~~~r  496 (504)
T PLN00110        491 AMVTPR  496 (504)
T ss_pred             EeeccC
Confidence            999988


No 6  
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=5.1e-78  Score=597.94  Aligned_cols=472  Identities=31%  Similarity=0.595  Sum_probs=382.5

Q ss_pred             HHHHHHhcCCCCCCCCCCCCCCeeeeccCCCC-CchHHHHHHHHHhCCeeEEecCCeeEEEecCHHHHHHHHHhcCcccC
Q 036305           35 LLLLRIKSSRPKQHPPGPPGWPIIGNMFDLGT-VPHRTLTELRQKYGDVIWLKFGAINTMVILSAKAATDFFKNHDSTFA  113 (515)
Q Consensus        35 ~~~~~~~~~~~~~~pPgp~~~p~iG~~~~~~~-~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~i~~~~~~~~~  113 (515)
                      +++++....++.+.||||+++|++||++.+.. ++..++.+++++||++|++++|+.++++++||+.+++++.++...|.
T Consensus        16 ~~~~~~~~~~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~   95 (499)
T PLN03234         16 FFFLRSTTKKSLRLPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFT   95 (499)
T ss_pred             HHHHHHhcCCCCCCCcCCCCCCeeccHHhcCCCCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCcccc
Confidence            34444455566788999999999999988864 78899999999999999999999999999999999999998877787


Q ss_pred             CCCCccceeeeecCCcccccCCCChHHHHHHHhHHhhhcchHHHHHcHHHHHHHHHHHHHHHHHhc---CCcchHHHHHH
Q 036305          114 ERKVTETMRVHGYDKSSLALAPYGAFWRVLRRLVTVEMLVTKRINETASVRRKCVNDMLLWIEQEA---SGVHVARLVFL  190 (515)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~l~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~---~~vd~~~~~~~  190 (515)
                      .++.........+.+..+.+...++.|+++|+.+..+.|+++.+..+.+.+.+.++++++.|.+..   +++|+.+++..
T Consensus        96 ~r~~~~~~~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vd~~~~~~~  175 (499)
T PLN03234         96 ARPLLKGQQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDLSELLLS  175 (499)
T ss_pred             CCCCchhhhhhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHhccCCCeEEHHHHHHH
Confidence            776543322222223344455678999999998644899999999999999999999999997542   27999999999


Q ss_pred             HHHHHHHHHHhhhccccccCCchHHHHHHHHHHHHHhcCCCcccccccccccC-chhHHHHHHHHHHHHHHHHHHHHHHH
Q 036305          191 STFNLLGNLMLSRDLLDRESNDGAEFFQAMMGLMEWSGHANLADFFPILRRLD-PQGLRRKMERDVGKALEIASKFVKER  269 (515)
Q Consensus       191 ~~~~~i~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~  269 (515)
                      +++|+++.++||.+++... +...++.+.+...............+|++..+. .....++..++.+.+.+++++.++++
T Consensus       176 ~t~dvi~~~~fG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~  254 (499)
T PLN03234        176 FTNCVVCRQAFGKRYNEYG-TEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDET  254 (499)
T ss_pred             HHHHHHHHHHhCCcccccc-hhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999985332 334556666655544333233334556554331 12234567788899999999999887


Q ss_pred             HHhhccccCCCCccccccHHHHHHhcccCCCCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHH
Q 036305          270 LEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKA  349 (515)
Q Consensus       270 ~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~  349 (515)
                      ++...      ...+..|+++.+++..+++. .+..++++++.+++.++++||+|||+++++|++++|++||++|+++++
T Consensus       255 ~~~~~------~~~~~~d~l~~l~~~~~~~~-~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~  327 (499)
T PLN03234        255 LDPNR------PKQETESFIDLLMQIYKDQP-FSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQD  327 (499)
T ss_pred             Hhhcc------cCCCcccHHHHHHHHhhccC-cCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHH
Confidence            63211      11235689999987653321 123589999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCCCcccCCCChhHHHHHHhhccCCCCCcCCCcccccccccccceecCCCCEEEeehhhhcCCCCCC-CCC
Q 036305          350 ELAQAVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVW-DEP  428 (515)
Q Consensus       350 Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~-~~p  428 (515)
                      |+++++++++.++++++++|||++|||+|+||++|++++.++|.+.+|++++||.||+|+.|.++.+.+||||++| +||
T Consensus       328 Ei~~~~~~~~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P  407 (499)
T PLN03234        328 EVRNVIGDKGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNP  407 (499)
T ss_pred             HHHHHhCCCCCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEehHhhhCCcccccCCh
Confidence            9999998767789999999999999999999999999986679999999999999999999999999999999999 899


Q ss_pred             CCCCCCCCCCCCCC--ccCCCcceeccCCCCCCCCCHHHHHHHHHHHHHHHHhhceeeeCCC---ccccccccccceeec
Q 036305          429 WSFKPERFLGSTVD--YKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDWELDCK---EEIDMNDRMGITVRK  503 (515)
Q Consensus       429 ~~F~p~R~l~~~~~--~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~---~~~~~~~~~~~~~~~  503 (515)
                      ++||||||+++...  ....+..++|||+|+|+|+|+++|++|+++++|.|+++|+|++++.   +.+..+..++++..+
T Consensus       408 ~~F~PeR~l~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~  487 (499)
T PLN03234        408 NEFIPERFMKEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGLAMHK  487 (499)
T ss_pred             hhcCchhhcCCCCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCCCCCCccccccccccc
Confidence            99999999975422  2334568999999999999999999999999999999999998832   233455567888888


Q ss_pred             cCCeeeeeccC
Q 036305          504 AEPLIAVPKRC  514 (515)
Q Consensus       504 ~~~~~v~~~~r  514 (515)
                      ++++.+.+++|
T Consensus       488 ~~~~~~~~~~~  498 (499)
T PLN03234        488 KEHLVLAPTKH  498 (499)
T ss_pred             CCCeEEEeecC
Confidence            88999998887


No 7  
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=2.1e-77  Score=595.18  Aligned_cols=488  Identities=30%  Similarity=0.600  Sum_probs=391.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCeeeeccCCCCCchHHHHHHHHHhCCeeEEecCCeeEEEecCHHHH
Q 036305           22 LVCIIIFSASGAVLLLLRIKSSRPKQHPPGPPGWPIIGNMFDLGTVPHRTLTELRQKYGDVIWLKFGAINTMVILSAKAA  101 (515)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pPgp~~~p~iG~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~  101 (515)
                      .+++.++++.++++.+++.+..++.+.||||+++|++||++++..+++.++.++++|||++|++++++.++++++||+.+
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ppgp~~~pl~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~   86 (514)
T PLN03112          7 SLLFSVLIFNVLIWRWLNASMRKSLRLPPGPPRWPIVGNLLQLGPLPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELI   86 (514)
T ss_pred             HHHHHHHHHHHHHHHHccccccCCCCCccCCCCCCeeeeHHhcCCchHHHHHHHHHHhCCeEEEEecCccEEEECCHHHH
Confidence            34444444444455566667777788999999999999999888889999999999999999999999999999999999


Q ss_pred             HHHHHhcCcccCCCCCccceeeeecCCcccccCCCChHHHHHHHhHHhhhcchHHHHHcHHHHHHHHHHHHHHHHHhc--
Q 036305          102 TDFFKNHDSTFAERKVTETMRVHGYDKSSLALAPYGAFWRVLRRLVTVEMLVTKRINETASVRRKCVNDMLLWIEQEA--  179 (515)
Q Consensus       102 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~l~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~--  179 (515)
                      ++++.++...|++++.........++...++++.+|+.|+++|+.+.++.|++++++.+.+.+.+.++.+++.+.+..  
T Consensus        87 ~~vl~~~~~~f~~~~~~~~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~~~~  166 (514)
T PLN03112         87 REILLRQDDVFASRPRTLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEAAQT  166 (514)
T ss_pred             HHHHHhCCcccccCCCcccceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHhhcc
Confidence            999988777888776543332223334455567789999999999765789999999999999999999998765432  


Q ss_pred             -CCcchHHHHHHHHHHHHHHHHhhhccccccC---CchHHHHHHHHHHHHHhcCCCcccccccccccCchhHHHHHHHHH
Q 036305          180 -SGVHVARLVFLSTFNLLGNLMLSRDLLDRES---NDGAEFFQAMMGLMEWSGHANLADFFPILRRLDPQGLRRKMERDV  255 (515)
Q Consensus       180 -~~vd~~~~~~~~~~~~i~~~~fg~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~  255 (515)
                       +++|+.+.+..+++++++.++||.++.+...   +...++.+.+..+............+|+++++.+....++..+..
T Consensus       167 ~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~  246 (514)
T PLN03112        167 GKPVNLREVLGAFSMNNVTRMLLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGCEKKMREVE  246 (514)
T ss_pred             CCeeeHHHHHHHHHHHHHHHHHcCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCcccHHHHHHHHH
Confidence             2799999999999999999999998843321   223456666665554433233344567665553333446666778


Q ss_pred             HHHHHHHHHHHHHHHHhhccccCCCCccccccHHHHHHhcccCCCCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHH
Q 036305          256 GKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALT  335 (515)
Q Consensus       256 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~  335 (515)
                      +.+.+++++.++++++..... .  ...+..|+++.++++..++  ....++++++.+++..+++||+|||+++++|+++
T Consensus       247 ~~~~~~~~~~i~~~~~~~~~~-~--~~~~~~d~l~~ll~~~~~~--~~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~  321 (514)
T PLN03112        247 KRVDEFHDKIIDEHRRARSGK-L--PGGKDMDFVDVLLSLPGEN--GKEHMDDVEIKALMQDMIAAATDTSAVTNEWAMA  321 (514)
T ss_pred             HHHHHHHHHHHHHHHHhhccc-c--cCCccchHHHHHHHhhccc--cccCCCHHHHHHHHHHHhccccccHHHHHHHHHH
Confidence            888888888888877322110 0  1123468999999864332  1225899999999999999999999999999999


Q ss_pred             HHhhCchHHHHHHHHHHHHhcCCCCCCcccCCCChhHHHHHHhhccCCCCCcCCCcccccccccccceecCCCCEEEeeh
Q 036305          336 ELLTNPESLNKAKAELAQAVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNA  415 (515)
Q Consensus       336 ~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~  415 (515)
                      +|++||++|+++++||+++++.++.++++++++|||++|||+|++|+||++++.++|.+.+|++++||.||+|+.|.++.
T Consensus       322 ~L~~~P~vq~kl~~Ei~~~~~~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~v~~~~  401 (514)
T PLN03112        322 EVIKNPRVLRKIQEELDSVVGRNRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVFINT  401 (514)
T ss_pred             HHHhChHHHHHHHHHHHHhcCCCCcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCEEEEeh
Confidence            99999999999999999999877779999999999999999999999999998678999999999999999999999999


Q ss_pred             hhhcCCCCCCCCCCCCCCCCCCCCCCC---c-cCCCcceeccCCCCCCCCCHHHHHHHHHHHHHHHHhhceeeeC-CC--
Q 036305          416 WAIGRDPEVWDEPWSFKPERFLGSTVD---Y-KGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDWELD-CK--  488 (515)
Q Consensus       416 ~~~~~d~~~~~~p~~F~p~R~l~~~~~---~-~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~f~~~~~-~~--  488 (515)
                      +.+|+||++|+||++||||||+.....   . ...+..++|||+|+|.|||++||++|+++++++||++|||++. +.  
T Consensus       402 ~~~h~d~~~~~dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~  481 (514)
T PLN03112        402 HGLGRNTKIWDDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDGLRP  481 (514)
T ss_pred             HHhhCCcccCCChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCCCCCc
Confidence            999999999999999999998653211   1 1224579999999999999999999999999999999999987 42  


Q ss_pred             ccccccccccceeeccCCeeeeeccC
Q 036305          489 EEIDMNDRMGITVRKAEPLIAVPKRC  514 (515)
Q Consensus       489 ~~~~~~~~~~~~~~~~~~~~v~~~~r  514 (515)
                      +........+++++++.+++|++.+|
T Consensus       482 ~~~~~~~~~~~~~~~~~~~~~~~~~r  507 (514)
T PLN03112        482 EDIDTQEVYGMTMPKAKPLRAVATPR  507 (514)
T ss_pred             ccCCCccccCcccccCCCeEEEeecC
Confidence            22334444578888888999999998


No 8  
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=1.8e-77  Score=594.19  Aligned_cols=466  Identities=36%  Similarity=0.690  Sum_probs=370.5

Q ss_pred             CCCCCCCCCCCCCCeeeeccCCCCCchHHHHHHHHHhCCeeEEecCCeeEEEecCHHHHHHHHHhcCcccCCCCCcccee
Q 036305           43 SRPKQHPPGPPGWPIIGNMFDLGTVPHRTLTELRQKYGDVIWLKFGAINTMVILSAKAATDFFKNHDSTFAERKVTETMR  122 (515)
Q Consensus        43 ~~~~~~pPgp~~~p~iG~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~  122 (515)
                      .++.+.||||+++|++||++.+...++.++.+|+++||++|++++|+.++++|+||+.+++++.++...|+.++......
T Consensus        32 ~~~~~~ppgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~~  111 (516)
T PLN02183         32 RRRLPYPPGPKGLPIIGNMLMMDQLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANIAIS  111 (516)
T ss_pred             cCCCCCCcCCCCCCeeccHHhcCCcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcccchh
Confidence            34457899999999999998876667788999999999999999999999999999999999998777777766433222


Q ss_pred             eeecCCcccccCCCChHHHHHHHhHHhhhcchHHHHHcHHHHHHHHHHHHHHHHHhcC-CcchHHHHHHHHHHHHHHHHh
Q 036305          123 VHGYDKSSLALAPYGAFWRVLRRLVTVEMLVTKRINETASVRRKCVNDMLLWIEQEAS-GVHVARLVFLSTFNLLGNLML  201 (515)
Q Consensus       123 ~~~~~~~~~~~~~~~~~w~~~R~~l~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~-~vd~~~~~~~~~~~~i~~~~f  201 (515)
                      ....++.+++++.+|+.|+++|+++.+++|+.+.++.+.++ .++++.+++.+....+ ++|+.+++..+++|++++++|
T Consensus       112 ~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~-~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~vi~~~~f  190 (516)
T PLN02183        112 YLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASV-RDEVDSMVRSVSSNIGKPVNIGELIFTLTRNITYRAAF  190 (516)
T ss_pred             ccccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHH-HHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHhHhh
Confidence            22222345667788999999999854489999999988886 4678999999865433 899999999999999999999


Q ss_pred             hhccccccCCchHHHHHHHHHHHHHhcCCCcccccccccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccC-CC
Q 036305          202 SRDLLDRESNDGAEFFQAMMGLMEWSGHANLADFFPILRRLDPQGLRRKMERDVGKALEIASKFVKERLEQKDKNVT-GT  280 (515)
Q Consensus       202 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~  280 (515)
                      |.+++.    ...++.+.+..+............+|++.++.+....++..+..+.+.+++.+.+++++++..+... ..
T Consensus       191 G~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  266 (516)
T PLN02183        191 GSSSNE----GQDEFIKILQEFSKLFGAFNVADFIPWLGWIDPQGLNKRLVKARKSLDGFIDDIIDDHIQKRKNQNADND  266 (516)
T ss_pred             cCcccc----hHHHHHHHHHHHHHHhCCccHHHhcchhHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccc
Confidence            998732    2245666666555444333344567776554333345566777888888888888887743221110 00


Q ss_pred             CccccccHHHHHHhcccCCC--------CCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHH
Q 036305          281 SDEKRKDFLDVMLDFEGNGK--------DEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELA  352 (515)
Q Consensus       281 ~~~~~~d~l~~ll~~~~~~~--------~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~  352 (515)
                      ......|+++.+++...+..        ..+..++++++..++..+++||+|||+++++|++++|++||++|+|+++||+
T Consensus       267 ~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~Ei~  346 (516)
T PLN02183        267 SEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDLKRVQQELA  346 (516)
T ss_pred             cccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence            11134689999998543211        0123589999999999999999999999999999999999999999999999


Q ss_pred             HHhcCCCCCCcccCCCChhHHHHHHhhccCCCCCcCCCcccccccccccceecCCCCEEEeehhhhcCCCCCCCCCCCCC
Q 036305          353 QAVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFK  432 (515)
Q Consensus       353 ~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~  432 (515)
                      ++++.++.++.+++++||||+|||+|+||++|++++ ..|.+.+|++++||.||||+.|.++.+.+||||++|+||++|+
T Consensus       347 ~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~-~~r~~~~d~~l~g~~IPkGt~V~~~~~~~hrd~~~~~dP~~F~  425 (516)
T PLN02183        347 DVVGLNRRVEESDLEKLTYLKCTLKETLRLHPPIPL-LLHETAEDAEVAGYFIPKRSRVMINAWAIGRDKNSWEDPDTFK  425 (516)
T ss_pred             HHcCCCCCCCHHHhccChHHHHHHHHHhccCCCccc-eeeeccCceeECCEEECCCCEEEEehhhhcCCccccCCccccC
Confidence            999866678999999999999999999999999999 4599999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCC-ccCCCcceeccCCCCCCCCCHHHHHHHHHHHHHHHHhhceeeeCCCcc---ccccccccceeeccCCee
Q 036305          433 PERFLGSTVD-YKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDWELDCKEE---IDMNDRMGITVRKAEPLI  508 (515)
Q Consensus       433 p~R~l~~~~~-~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~~---~~~~~~~~~~~~~~~~~~  508 (515)
                      ||||++++.. ...++..|+|||+|+|.|+|++||++|+++++|+||++|+|++.++..   ......++.+..+..++.
T Consensus       426 PeRfl~~~~~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  505 (516)
T PLN02183        426 PSRFLKPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKPSELDMNDVFGLTAPRATRLV  505 (516)
T ss_pred             chhhCCCCCccccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCCCCCCCChhhccccccccCCCcE
Confidence            9999975432 223445799999999999999999999999999999999999874222   222223355555666888


Q ss_pred             eeeccC
Q 036305          509 AVPKRC  514 (515)
Q Consensus       509 v~~~~r  514 (515)
                      +.+++|
T Consensus       506 ~~~~~r  511 (516)
T PLN02183        506 AVPTYR  511 (516)
T ss_pred             EEeecC
Confidence            888877


No 9  
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=1.4e-76  Score=585.06  Aligned_cols=456  Identities=24%  Similarity=0.419  Sum_probs=362.7

Q ss_pred             HHHhcCCCCCCCCCCCCCCeeeeccCCCCCchHHHHHHHHHhCCeeEEecCCeeEEEecCHHHHHHHHHhcCcccCCCCC
Q 036305           38 LRIKSSRPKQHPPGPPGWPIIGNMFDLGTVPHRTLTELRQKYGDVIWLKFGAINTMVILSAKAATDFFKNHDSTFAERKV  117 (515)
Q Consensus        38 ~~~~~~~~~~~pPgp~~~p~iG~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~  117 (515)
                      ++...+...+.+|||+++|++||++.+..+++..+.+++++||++|++++|+.++++++||+.+++++.++...|.+++.
T Consensus        20 ~~~~~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~   99 (482)
T PTZ00404         20 YKKYKKIHKNELKGPIPIPILGNLHQLGNLPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPK   99 (482)
T ss_pred             HHHhhhccCCCCCCCCCCCeeccHhhhcccHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCC
Confidence            33344455788999999999999998888899999999999999999999999999999999999999887666766654


Q ss_pred             ccceeeeecCCcccccCCCChHHHHHHHhHHhhhcchHHHHHcHHHHHHHHHHHHHHHHHh---cCCcchHHHHHHHHHH
Q 036305          118 TETMRVHGYDKSSLALAPYGAFWRVLRRLVTVEMLVTKRINETASVRRKCVNDMLLWIEQE---ASGVHVARLVFLSTFN  194 (515)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~w~~~R~~l~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~---~~~vd~~~~~~~~~~~  194 (515)
                      ........+ +.+ +++.+|+.|+++|+++. +.|+++.++.+.+.+.+.++.+++.|.+.   ++.+|+.+++..+++|
T Consensus       100 ~~~~~~~~~-~~~-l~~~~g~~w~~~Rk~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d  176 (482)
T PTZ00404        100 IPSIKHGTF-YHG-IVTSSGEYWKRNREIVG-KAMRKTNLKHIYDLLDDQVDVLIESMKKIESSGETFEPRYYLTKFTMS  176 (482)
T ss_pred             cceeeeecc-CCc-eeccChHHHHHHHHHHH-HHHhhhccccHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHH
Confidence            433322222 344 45567999999999998 99999999999999999999999998753   2279999999999999


Q ss_pred             HHHHHHhhhccccccC---CchHHHHHHHHHHHHHhcCCCcccccccccccCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036305          195 LLGNLMLSRDLLDRES---NDGAEFFQAMMGLMEWSGHANLADFFPILRRLDPQGLRRKMERDVGKALEIASKFVKERLE  271 (515)
Q Consensus       195 ~i~~~~fg~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  271 (515)
                      +++.++||.+++..++   +...++.+.+..++...........++++... .....+...+..+.+.+++++.++++. 
T Consensus       177 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~-  254 (482)
T PTZ00404        177 AMFKYIFNEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPL-YYQYLEHTDKNFKKIKKFIKEKYHEHL-  254 (482)
T ss_pred             HHHHHHhccccccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhh-hHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence            9999999998854321   12345666666665544332222233333221 111122334456667777777666655 


Q ss_pred             hhccccCCCCccccccHHHHHHhcccCCCCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHH
Q 036305          272 QKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAEL  351 (515)
Q Consensus       272 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei  351 (515)
                      +..      ......|+++.++++.++.    +....+++++++..+++||+|||+++++|++++|++||++|+++++||
T Consensus       255 ~~~------~~~~~~dll~~ll~~~~~~----~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei  324 (482)
T PTZ00404        255 KTI------DPEVPRDLLDLLIKEYGTN----TDDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEI  324 (482)
T ss_pred             Hcc------CCCCcccHHHHHHHHhccC----CcccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHH
Confidence            221      1113568999999865321    122234588999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCCCcccCCCChhHHHHHHhhccCCCCCcCCCcccccccccc-cceecCCCCEEEeehhhhcCCCCCCCCCCC
Q 036305          352 AQAVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNF-QGYHIPKDTQVLVNAWAIGRDPEVWDEPWS  430 (515)
Q Consensus       352 ~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i-~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~  430 (515)
                      +++++++..++++++++||||+|||+|+||+||+++..++|.+.+|+++ +||.||+|+.|.++.+++|+||++||||++
T Consensus       325 ~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~  404 (482)
T PTZ00404        325 KSTVNGRNKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKYFENPEQ  404 (482)
T ss_pred             HHHhcCCCCCCccccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHhhCCccccCCccc
Confidence            9999876678999999999999999999999999997678999999999 999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCccCCCcceeccCCCCCCCCCHHHHHHHHHHHHHHHHhhceeeeCCCccccccccccceeeccCCeeee
Q 036305          431 FKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDWELDCKEEIDMNDRMGITVRKAEPLIAV  510 (515)
Q Consensus       431 F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  510 (515)
                      |+||||++..     .+..++|||+|+|.|+|++||++|+++++++|+++|+|++++.+++......++++. +.+++|+
T Consensus       405 F~PeRwl~~~-----~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~-~~~~~v~  478 (482)
T PTZ00404        405 FDPSRFLNPD-----SNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGKKIDETEEYGLTLK-PNKFKVL  478 (482)
T ss_pred             cCccccCCCC-----CCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCCCCCcccccceeec-CCCceee
Confidence            9999998642     345899999999999999999999999999999999999874333333334567777 5589999


Q ss_pred             eccC
Q 036305          511 PKRC  514 (515)
Q Consensus       511 ~~~r  514 (515)
                      +++|
T Consensus       479 ~~~R  482 (482)
T PTZ00404        479 LEKR  482 (482)
T ss_pred             eecC
Confidence            9987


No 10 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=4.1e-76  Score=584.94  Aligned_cols=470  Identities=30%  Similarity=0.534  Sum_probs=360.7

Q ss_pred             HHHhcCCCCCCCCCCCCCCeeeeccCCCCC-chHHHHHHHHHhCCeeEEecCCeeEEEecCHHHHHHHHHhcCcccCCCC
Q 036305           38 LRIKSSRPKQHPPGPPGWPIIGNMFDLGTV-PHRTLTELRQKYGDVIWLKFGAINTMVILSAKAATDFFKNHDSTFAERK  116 (515)
Q Consensus        38 ~~~~~~~~~~~pPgp~~~p~iG~~~~~~~~-~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~  116 (515)
                      ......++.+.||||+++|++|+++.+.++ .+..+.+|+++||++|++++|+.++++|+||+.+++++.++...|.+++
T Consensus        21 ~~~~~~~~~~~pPgp~~~p~~g~l~~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~  100 (503)
T PLN02394         21 VSKLRGKKLKLPPGPAAVPIFGNWLQVGDDLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRT  100 (503)
T ss_pred             HHHHhcCcCCCCcCCCCCCeeeeHHhcCCCchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCC
Confidence            444455667899999999999999888655 5789999999999999999999999999999999999988766676665


Q ss_pred             CccceeeeecCCcccccCCCChHHHHHHHhHHhhhcchHHHHHcHHHHHHHHHHHHHHHHHhc---C-CcchHHHHHHHH
Q 036305          117 VTETMRVHGYDKSSLALAPYGAFWRVLRRLVTVEMLVTKRINETASVRRKCVNDMLLWIEQEA---S-GVHVARLVFLST  192 (515)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~l~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~---~-~vd~~~~~~~~~  192 (515)
                      .......+...+.+.+++.+|+.|+++||.+..+.|+++.++.+.+.+.++++.+++.|.+..   + .+|+.+.+..++
T Consensus       101 ~~~~~~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~~~~~~v~~~~~~~~~~  180 (503)
T PLN02394        101 RNVVFDIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEAATEGVVIRRRLQLMM  180 (503)
T ss_pred             CcchHhHhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhhccCCcEecHHHHHHHH
Confidence            433333222123455677789999999999866899999999999999999999999987643   2 589999999999


Q ss_pred             HHHHHHHHhhhccccccCCchHHHHHHHHHHHHHhcC--CCcccccccccccCchhHHHHHHHHHHHHHH-HHHHHHHHH
Q 036305          193 FNLLGNLMLSRDLLDRESNDGAEFFQAMMGLMEWSGH--ANLADFFPILRRLDPQGLRRKMERDVGKALE-IASKFVKER  269 (515)
Q Consensus       193 ~~~i~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~  269 (515)
                      +|+++.++||.+++...+....++.............  ......+|++... .....+........... +.+..++++
T Consensus       181 ~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~  259 (503)
T PLN02394        181 YNIMYRMMFDRRFESEDDPLFLKLKALNGERSRLAQSFEYNYGDFIPILRPF-LRGYLKICQDVKERRLALFKDYFVDER  259 (503)
T ss_pred             HHHHHHHHhCCCcccccchhHHHHHHHHHHHHHHhcccccchhhhchHHHHH-hhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999543322223332332222222111  1122344544322 11111222222222222 333456655


Q ss_pred             HHhhccccCCCCccccccHHHHHHhcccCCCCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHH
Q 036305          270 LEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKA  349 (515)
Q Consensus       270 ~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~  349 (515)
                      ++..... . ...+...|+++.+++..+++     .++++++..++..+++||+|||+++++|++++|++||++|++|++
T Consensus       260 ~~~~~~~-~-~~~~~~~d~l~~ll~~~~~~-----~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~  332 (503)
T PLN02394        260 KKLMSAK-G-MDKEGLKCAIDHILEAQKKG-----EINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRD  332 (503)
T ss_pred             HHHhhhc-c-CCcchhhhHHHHHHhccccC-----CCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHH
Confidence            5221100 0 01123468999999875433     589999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCCCcccCCCChhHHHHHHhhccCCCCCcCCCcccccccccccceecCCCCEEEeehhhhcCCCCCCCCCC
Q 036305          350 ELAQAVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPW  429 (515)
Q Consensus       350 Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~  429 (515)
                      ||+++++.+..++++++++||||+|||+|+||++|++++..+|.+.+|++++||.||+|+.|.++.|.+||||++|+||+
T Consensus       333 Ei~~v~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~  412 (503)
T PLN02394        333 ELDTVLGPGNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLANNPELWKNPE  412 (503)
T ss_pred             HHHHHhCCCCCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchHHHhCCcccCCCcc
Confidence            99999987667899999999999999999999999999977899999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCC--ccCCCcceeccCCCCCCCCCHHHHHHHHHHHHHHHHhhceeeeCCCc-ccccccccc-ceeeccC
Q 036305          430 SFKPERFLGSTVD--YKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDWELDCKE-EIDMNDRMG-ITVRKAE  505 (515)
Q Consensus       430 ~F~p~R~l~~~~~--~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~-~~~~~~~~~-~~~~~~~  505 (515)
                      +|+||||++.+.+  ....+..++|||+|+|.|+|++||++|+++++|+|+++|+|++.++. .+.....++ +....+.
T Consensus       413 ~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  492 (503)
T PLN02394        413 EFRPERFLEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQSKIDVSEKGGQFSLHIAK  492 (503)
T ss_pred             ccCccccCCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCCCcCccccccCceeeccCC
Confidence            9999999975421  12234679999999999999999999999999999999999987333 344444454 5554556


Q ss_pred             CeeeeeccCC
Q 036305          506 PLIAVPKRCK  515 (515)
Q Consensus       506 ~~~v~~~~r~  515 (515)
                      ++.|++++|.
T Consensus       493 ~~~~~~~~r~  502 (503)
T PLN02394        493 HSTVVFKPRS  502 (503)
T ss_pred             CceEEeecCC
Confidence            9999999983


No 11 
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=4.7e-76  Score=582.68  Aligned_cols=466  Identities=31%  Similarity=0.592  Sum_probs=365.6

Q ss_pred             hcCCCCCCCCCCCCCCeeeeccCCC-CCchHHHHHHHHHhCCeeEEecCCeeEEEecCHHHHHHHHHhcCcccCCCCCcc
Q 036305           41 KSSRPKQHPPGPPGWPIIGNMFDLG-TVPHRTLTELRQKYGDVIWLKFGAINTMVILSAKAATDFFKNHDSTFAERKVTE  119 (515)
Q Consensus        41 ~~~~~~~~pPgp~~~p~iG~~~~~~-~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~  119 (515)
                      ...++.+.||||+++|++||++.+. .++..++.+|+++||++|++++++.++++|+||+.+++++.++...|.+++...
T Consensus        23 ~~~~~~~~ppgp~~~p~~G~l~~l~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~~~  102 (502)
T PLN02966         23 PKTKRYKLPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHR  102 (502)
T ss_pred             cccCCCCCCcCCCCCCeeccHHhcCCCChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccccCCCCCc
Confidence            3344557899999999999998884 478999999999999999999999999999999999999998766676655433


Q ss_pred             ceeeeecCCcccccCCCChHHHHHHHhHHhhhcchHHHHHcHHHHHHHHHHHHHHHHHhc--C-CcchHHHHHHHHHHHH
Q 036305          120 TMRVHGYDKSSLALAPYGAFWRVLRRLVTVEMLVTKRINETASVRRKCVNDMLLWIEQEA--S-GVHVARLVFLSTFNLL  196 (515)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~w~~~R~~l~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~--~-~vd~~~~~~~~~~~~i  196 (515)
                      .......+.+...+..+|+.|+++|+.+.++.|+++++..+.+.+.+.++++++.|.+..  + .+|+.+++..+++|++
T Consensus       103 ~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~t~dvi  182 (502)
T PLN02966        103 GHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISELMLTFTNSVV  182 (502)
T ss_pred             cceeeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHHH
Confidence            223333333444456679999999999444999999999999999999999999997642  2 7999999999999999


Q ss_pred             HHHHhhhccccccCCchHHHHHHHHHHHHHhcCCCcccccccccccC-chhHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 036305          197 GNLMLSRDLLDRESNDGAEFFQAMMGLMEWSGHANLADFFPILRRLD-PQGLRRKMERDVGKALEIASKFVKERLEQKDK  275 (515)
Q Consensus       197 ~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  275 (515)
                      +.++||.++++.. +...++.+.+...........+..++|++..+. .....+......+...+++.+.++++.+... 
T Consensus       183 ~~~~fG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-  260 (502)
T PLN02966        183 CRQAFGKKYNEDG-EEMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNETLDPKR-  260 (502)
T ss_pred             HHHHhCCccCccc-hHHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhccc-
Confidence            9999999985433 334456665555544433333345566443221 1111223334556667777777776652211 


Q ss_pred             ccCCCCccccccHHHHHHhcccCCCCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHHh
Q 036305          276 NVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAV  355 (515)
Q Consensus       276 ~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~  355 (515)
                           ......|+++.+++..+++. .+..++.+++.+++..+++||+|||+++++|++++|++||++|+++++||++++
T Consensus       261 -----~~~~~~~~l~~l~~~~~~~~-~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~  334 (502)
T PLN02966        261 -----VKPETESMIDLLMEIYKEQP-FASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYM  334 (502)
T ss_pred             -----cccccccHHHHHHHHHhccC-cCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHh
Confidence                 11134689999997654321 123589999999999999999999999999999999999999999999999998


Q ss_pred             cCC--CCCCcccCCCChhHHHHHHhhccCCCCCcCCCcccccccccccceecCCCCEEEeehhhhcCCCCCC-CCCCCCC
Q 036305          356 GAD--RTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVW-DEPWSFK  432 (515)
Q Consensus       356 ~~~--~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~  432 (515)
                      +.+  +.++++++++||||+|||+|+||++|++++.++|.+.+|++++||.||+|+.|.++.+.+||||++| |||++|+
T Consensus       335 ~~~~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~dP~~F~  414 (502)
T PLN02966        335 KEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFR  414 (502)
T ss_pred             cccCCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccccCCcccccCChhhCC
Confidence            742  4589999999999999999999999999986789999999999999999999999999999999999 9999999


Q ss_pred             CCCCCCCCCCccCCCcceeccCCCCCCCCCHHHHHHHHHHHHHHHHhhceeeeCCC---ccccccccccceeeccCCeee
Q 036305          433 PERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDWELDCK---EEIDMNDRMGITVRKAEPLIA  509 (515)
Q Consensus       433 p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~---~~~~~~~~~~~~~~~~~~~~v  509 (515)
                      ||||++.+.+....+..++|||+|+|+|+|++||.+|+++++|+||++|+|++.++   +.+..+...+++..++.++++
T Consensus       415 PeRwl~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  494 (502)
T PLN02966        415 PERFLEKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGMKPDDINMDVMTGLAMHKSQHLKL  494 (502)
T ss_pred             hhhhcCCCCCcCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCCCcccCCcccccCeeeccCCCeEE
Confidence            99999754322234568999999999999999999999999999999999998732   223344445666655557766


Q ss_pred             eeccC
Q 036305          510 VPKRC  514 (515)
Q Consensus       510 ~~~~r  514 (515)
                      +.++.
T Consensus       495 ~~~~~  499 (502)
T PLN02966        495 VPEKV  499 (502)
T ss_pred             EEEeC
Confidence            66554


No 12 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=1.9e-75  Score=580.17  Aligned_cols=468  Identities=26%  Similarity=0.462  Sum_probs=365.4

Q ss_pred             CCCCCCCCCCCCCeeeeccCCC---CCchHHHHHHHHHhCCeeEEecCCeeEEEecCHHHHHHHHHhcCcccCCCCCccc
Q 036305           44 RPKQHPPGPPGWPIIGNMFDLG---TVPHRTLTELRQKYGDVIWLKFGAINTMVILSAKAATDFFKNHDSTFAERKVTET  120 (515)
Q Consensus        44 ~~~~~pPgp~~~p~iG~~~~~~---~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~  120 (515)
                      +..+.||||+++|++||++.+.   .+++.++.+++++||++|++++|+.++++|+||+.+++++.++...|++++....
T Consensus        32 ~~~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~~  111 (519)
T PLN00168         32 KGRRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRPAVAS  111 (519)
T ss_pred             CCCCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCcccc
Confidence            3457899999999999987653   3578899999999999999999999999999999999999988777877765332


Q ss_pred             eeeeecCCcccccCCCChHHHHHHHhHHhhhcchHHHHHcHHHHHHHHHHHHHHHHHhcC---CcchHHHHHHHHHHHHH
Q 036305          121 MRVHGYDKSSLALAPYGAFWRVLRRLVTVEMLVTKRINETASVRRKCVNDMLLWIEQEAS---GVHVARLVFLSTFNLLG  197 (515)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~w~~~R~~l~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~---~vd~~~~~~~~~~~~i~  197 (515)
                      ....+.+...+.+..+|+.|+++||.+.++.|++++++.+.+.+.+.++.+++.|.+...   .+|+.+.+..+++++++
T Consensus       112 ~~~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~~~~~~~ii~  191 (519)
T PLN00168        112 SRLLGESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRRVLVDKLRREAEDAAAPRVVETFQYAMFCLLV  191 (519)
T ss_pred             hhhhccCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHH
Confidence            233322122222346799999999854449999999999999999999999999987542   67899999999999999


Q ss_pred             HHHhhhccccccCCchHHHHHHHHHHHHHh-cCCCcccccccccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 036305          198 NLMLSRDLLDRESNDGAEFFQAMMGLMEWS-GHANLADFFPILRRLDPQGLRRKMERDVGKALEIASKFVKERLEQKDKN  276 (515)
Q Consensus       198 ~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  276 (515)
                      .++||.++++   +....+........... ....+...+|++.+.......++..+..+.+.+++.++++++++.....
T Consensus       192 ~~~fG~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  268 (519)
T PLN00168        192 LMCFGERLDE---PAVRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLFRGRLQKALALRRRQKELFVPLIDARREYKNHL  268 (519)
T ss_pred             HHHcCCCcCh---hhHHHHHHHHHHHHHHhcCCCCHHHhCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence            9999998842   11223333333322212 1223345566543221112234555678888999999998887322110


Q ss_pred             ---cCCCC--ccccccHHHHHHhcccCCCCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHH
Q 036305          277 ---VTGTS--DEKRKDFLDVMLDFEGNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAEL  351 (515)
Q Consensus       277 ---~~~~~--~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei  351 (515)
                         .....  .....|+++.|++....+. .+..++++++.+++.++++||+|||+++++|++++|++||++|+++++||
T Consensus       269 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~~-~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~q~kl~~Ei  347 (519)
T PLN00168        269 GQGGEPPKKETTFEHSYVDTLLDIRLPED-GDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQSKLHDEI  347 (519)
T ss_pred             cccCccccccccccccHHHHHHhhhcccc-ccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence               00000  0124589999997643211 12369999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCC-CCCCcccCCCChhHHHHHHhhccCCCCCcCCCcccccccccccceecCCCCEEEeehhhhcCCCCCCCCCCC
Q 036305          352 AQAVGAD-RTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPWS  430 (515)
Q Consensus       352 ~~~~~~~-~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~  430 (515)
                      +++++++ +.++.+++.+||||+|||+|+||+||+++..++|.+.+|++++||.||+|+.|.++.+.+|+||++||||++
T Consensus       348 ~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkGt~v~~~~~~~~~d~~~~~~p~~  427 (519)
T PLN00168        348 KAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNFMVAEMGRDEREWERPME  427 (519)
T ss_pred             HHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECCCCEEEEChHHHhcCccccCCccc
Confidence            9999753 568999999999999999999999999998778999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCC-----ccCCCcceeccCCCCCCCCCHHHHHHHHHHHHHHHHhhceeeeCCCccccccccccceeeccC
Q 036305          431 FKPERFLGSTVD-----YKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDWELDCKEEIDMNDRMGITVRKAE  505 (515)
Q Consensus       431 F~p~R~l~~~~~-----~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~  505 (515)
                      |+||||++....     ...++..++|||+|+|.|||++||++|+++++++||++|+|++.++.+++.....+++..++.
T Consensus       428 F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~  507 (519)
T PLN00168        428 FVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVPGDEVDFAEKREFTTVMAK  507 (519)
T ss_pred             cCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCCCCcCChhhhceeEEeecC
Confidence            999999964211     112245799999999999999999999999999999999999874333343333456777778


Q ss_pred             CeeeeeccCC
Q 036305          506 PLIAVPKRCK  515 (515)
Q Consensus       506 ~~~v~~~~r~  515 (515)
                      +++|++++|+
T Consensus       508 ~~~~~~~~R~  517 (519)
T PLN00168        508 PLRARLVPRR  517 (519)
T ss_pred             CcEEEEEecc
Confidence            9999999985


No 13 
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=1.3e-74  Score=575.54  Aligned_cols=456  Identities=22%  Similarity=0.358  Sum_probs=357.8

Q ss_pred             hcCCCCCCCCCCCCCCeeeeccCCCC-------------------CchHHHHHHHHHhCCeeEEecCCeeEEEecCHHHH
Q 036305           41 KSSRPKQHPPGPPGWPIIGNMFDLGT-------------------VPHRTLTELRQKYGDVIWLKFGAINTMVILSAKAA  101 (515)
Q Consensus        41 ~~~~~~~~pPgp~~~p~iG~~~~~~~-------------------~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~  101 (515)
                      +.++..+.||||+++|++||++++..                   .....+.+|+++||++|++++|+.++++|+||+.+
T Consensus        36 ~~~~~~~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v  115 (516)
T PLN02290         36 KKIMERQGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELI  115 (516)
T ss_pred             HHHHHHcCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHH
Confidence            44455678999999999999877642                   22345788999999999999999999999999999


Q ss_pred             HHHHHhcCcccCCCCCccceeeeecCCcccccCCCChHHHHHHHhHHhhhcchHHHHHcHHHHHHHHHHHHHHHHHh---
Q 036305          102 TDFFKNHDSTFAERKVTETMRVHGYDKSSLALAPYGAFWRVLRRLVTVEMLVTKRINETASVRRKCVNDMLLWIEQE---  178 (515)
Q Consensus       102 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~l~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~---  178 (515)
                      ++++.++ ..+..++...........+.++ +..+|+.|+++||.+. +.|++.+++.+.+.+.++++.+++.|.+.   
T Consensus       116 ~~il~~~-~~~~~r~~~~~~~~~~~~g~~l-~~~~g~~Wk~~Rk~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~  192 (516)
T PLN02290        116 KELLTKY-NTVTGKSWLQQQGTKHFIGRGL-LMANGADWYHQRHIAA-PAFMGDRLKGYAGHMVECTKQMLQSLQKAVES  192 (516)
T ss_pred             HHHHhcC-CCCCCCcchhhhHHHHHhcCCc-cccCchHHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            9999886 3344444221110111113444 5557999999999998 89999999999999999999999999764   


Q ss_pred             cC-CcchHHHHHHHHHHHHHHHHhhhccccccCCchHHHHHHHHHHHHHhcCCCcccccccccccCchhHHHHHHHHHHH
Q 036305          179 AS-GVHVARLVFLSTFNLLGNLMLSRDLLDRESNDGAEFFQAMMGLMEWSGHANLADFFPILRRLDPQGLRRKMERDVGK  257 (515)
Q Consensus       179 ~~-~vd~~~~~~~~~~~~i~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~  257 (515)
                      ++ .+|+.+++..+++|+++.++||.++...     .++.+.+..+............+|++.++ +....+...+..+.
T Consensus       193 ~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-p~~~~~~~~~~~~~  266 (516)
T PLN02290        193 GQTEVEIGEYMTRLTADIISRTEFDSSYEKG-----KQIFHLLTVLQRLCAQATRHLCFPGSRFF-PSKYNREIKSLKGE  266 (516)
T ss_pred             CCceEEhHHHHHHHHHHHHHHHHcCCccccc-----hHHHHHHHHHHHHHHHhhhhhcCchhhhC-CChhHHHHHHHHHH
Confidence            22 6899999999999999999999988321     22333333332221111111234544433 33334556667788


Q ss_pred             HHHHHHHHHHHHHHhhccccCCCCccccccHHHHHHhcccCCCCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHH
Q 036305          258 ALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTEL  337 (515)
Q Consensus       258 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L  337 (515)
                      +.+++.+.++++++..... .  ......|+++.+++...+...++..++++++.+++.++++||+|||+++++|++++|
T Consensus       267 ~~~~~~~~i~~~~~~~~~~-~--~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~tl~~~l~~L  343 (516)
T PLN02290        267 VERLLMEIIQSRRDCVEIG-R--SSSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHETTALLLTWTLMLL  343 (516)
T ss_pred             HHHHHHHHHHHHHHHhhcc-c--CCCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence            8899999998887332111 0  112356899999986443222233588999999999999999999999999999999


Q ss_pred             hhCchHHHHHHHHHHHHhcCCCCCCcccCCCChhHHHHHHhhccCCCCCcCCCcccccccccccceecCCCCEEEeehhh
Q 036305          338 LTNPESLNKAKAELAQAVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWA  417 (515)
Q Consensus       338 ~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~  417 (515)
                      ++||++|+++++||+++++++ .++++++++||||+|||+|+||++|+++. ++|.+.+|++++||.||+|+.|.++.+.
T Consensus       344 ~~~P~vq~kl~~Ei~~v~~~~-~~~~~~l~~lpYl~avi~EtlRl~p~~~~-~~R~~~~d~~i~g~~IP~Gt~V~~~~~~  421 (516)
T PLN02290        344 ASNPTWQDKVRAEVAEVCGGE-TPSVDHLSKLTLLNMVINESLRLYPPATL-LPRMAFEDIKLGDLHIPKGLSIWIPVLA  421 (516)
T ss_pred             hcCHHHHHHHHHHHHHHhCCC-CCCHHHHhcChHHHHHHHHHHHcCCCccc-cceeecCCeeECCEEECCCCEEEecHHH
Confidence            999999999999999999864 78999999999999999999999999997 7899999999999999999999999999


Q ss_pred             hcCCCCCC-CCCCCCCCCCCCCCCCCccCCCcceeccCCCCCCCCCHHHHHHHHHHHHHHHHhhceeeeCCCcccccccc
Q 036305          418 IGRDPEVW-DEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDWELDCKEEIDMNDR  496 (515)
Q Consensus       418 ~~~d~~~~-~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~  496 (515)
                      +|+||++| +||++|+||||++.+   ......++|||.|+|.|+|++||++|++++++.||++|+|+++++.+  ....
T Consensus       422 ~~rdp~~~~~dP~~F~PeRfl~~~---~~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~~~~--~~~~  496 (516)
T PLN02290        422 IHHSEELWGKDANEFNPDRFAGRP---FAPGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISDNYR--HAPV  496 (516)
T ss_pred             hcCChhhhCCChhhcCccccCCCC---CCCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCCCcc--cCcc
Confidence            99999999 899999999999542   11234799999999999999999999999999999999999874322  1222


Q ss_pred             ccceeeccCCeeeeeccCC
Q 036305          497 MGITVRKAEPLIAVPKRCK  515 (515)
Q Consensus       497 ~~~~~~~~~~~~v~~~~r~  515 (515)
                      .+++..|..+++|++++|+
T Consensus       497 ~~~~~~p~~~~~~~~~~~~  515 (516)
T PLN02290        497 VVLTIKPKYGVQVCLKPLN  515 (516)
T ss_pred             ceeeecCCCCCeEEEEeCC
Confidence            3688899999999999985


No 14 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=1.3e-74  Score=564.98  Aligned_cols=454  Identities=30%  Similarity=0.489  Sum_probs=364.8

Q ss_pred             CCCCCCCCCCCCeeeeccCCCC---CchHHHHHHHHHhCCeeEEecCCeeEEEecCHHHHHHHHHhcCcccCCCCCcc-c
Q 036305           45 PKQHPPGPPGWPIIGNMFDLGT---VPHRTLTELRQKYGDVIWLKFGAINTMVILSAKAATDFFKNHDSTFAERKVTE-T  120 (515)
Q Consensus        45 ~~~~pPgp~~~p~iG~~~~~~~---~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~-~  120 (515)
                      ..+.||||+++|++|+++++.+   ....++.++..+||++|+.|+||.++++++||+.+++|+.++...+.+...+. .
T Consensus        33 ~~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~  112 (497)
T KOG0157|consen   33 KKKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPES  112 (497)
T ss_pred             HhccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHH
Confidence            5578999999999999988853   46778899999999999999999999999999999999975544444444433 2


Q ss_pred             eeeeecCCcccccCCCChHHHHHHHhHHhhhcchHHHHHcHHHHHHHHHHHHHHHHHhcC-C-cchHHHHHHHHHHHHHH
Q 036305          121 MRVHGYDKSSLALAPYGAFWRVLRRLVTVEMLVTKRINETASVRRKCVNDMLLWIEQEAS-G-VHVARLVFLSTFNLLGN  198 (515)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~w~~~R~~l~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~-~-vd~~~~~~~~~~~~i~~  198 (515)
                      ...+ + |.++++.. |+.|+++||++. +.|+.+.++.+...+.++...+...+..... . +|+.+.+..+++|+++.
T Consensus       113 ~~~~-l-G~gll~~~-g~~W~~~Rk~~~-~~f~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~tld~i~~  188 (497)
T KOG0157|consen  113 LKPW-L-GDGLLFSD-GEKWHKHRKLLT-PAFHFEILKSFVPVFIESSLILLLLLELAASGEEVDLQDLLKRLTLDIICK  188 (497)
T ss_pred             HHHH-h-cCccccCC-chHHHHHHhhcc-HhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEcHHHHHHHHHHHHHHH
Confidence            2222 2 44666666 999999999998 9999999999999999999888877766432 4 99999999999999999


Q ss_pred             HHhhhccccccCCchHHHHHHHHHHHHHhcCCCcccccc-cccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 036305          199 LMLSRDLLDRESNDGAEFFQAMMGLMEWSGHANLADFFP-ILRRLDPQGLRRKMERDVGKALEIASKFVKERLEQKDKNV  277 (515)
Q Consensus       199 ~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  277 (515)
                      ++||....+.+.+...++.+++..........   ...| +..++......++..++.+.+.++++++|++|+++..+..
T Consensus       189 ~~~G~~~~~~~~~~~~~~~~a~~~~~~~~~~~---~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~iI~~rr~~~~~~~  265 (497)
T KOG0157|consen  189 TAMGPESLDAEGPELFEYVQAFDDLTELISKR---INLPLGTKFLYGLKSERKLKKARKILHDFLEKIIRERREELEKEG  265 (497)
T ss_pred             HhcCCccccccCCcccHHHHHHHHHHHHHHHH---HcCchhhhHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            99993332223345567777777655443322   2334 3333322226688889999999999999999985432211


Q ss_pred             CCCCccccccHHHHHHhcccCCCCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcC
Q 036305          278 TGTSDEKRKDFLDVMLDFEGNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGA  357 (515)
Q Consensus       278 ~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~  357 (515)
                      .+. .....|+++.+....+      +.++++++.+++.+|++||+|||+++++|+++.|+.||++|+++++|+++++++
T Consensus       266 ~~~-~~~~~d~L~~~~~~~~------~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~~~  338 (497)
T KOG0157|consen  266 SGE-EKKRLDFLDTLLLEED------KPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEILGN  338 (497)
T ss_pred             Ccc-cchhhhHHHHHHHhcc------CCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCC
Confidence            111 2356778886333322      279999999999999999999999999999999999999999999999999985


Q ss_pred             C-CCCCcccCCCChhHHHHHHhhccCCCCCcCCCcccccccccc-cceecCCCCEEEeehhhhcCCCCCCC-CCCCCCCC
Q 036305          358 D-RTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNF-QGYHIPKDTQVLVNAWAIGRDPEVWD-EPWSFKPE  434 (515)
Q Consensus       358 ~-~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i-~g~~ip~G~~v~~~~~~~~~d~~~~~-~p~~F~p~  434 (515)
                      + ..++....++|+||++||+||||||||+|+ +.|.+.+|+++ +||.||+|+.|.++++.+|||+.+|+ ||++||||
T Consensus       339 ~~~~~~~~~~~~m~yl~~vi~EsLRLyppvp~-~~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F~Pe  417 (497)
T KOG0157|consen  339 RDDKWEVEKLDQMKYLEMVIKESLRLYPPVPL-VARKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEFDPE  417 (497)
T ss_pred             CCCCCChhhhhhhHHHHHHHHHHhccCCCCch-hhcccCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCChhhcCcc
Confidence            3 223344444699999999999999999999 77999999999 48999999999999999999999995 99999999


Q ss_pred             CCCCCCCCccCCCcceeccCCCCCCCCCHHHHHHHHHHHHHHHHhhceeeeCCCccccccccccceeeccCCeeeeeccC
Q 036305          435 RFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDWELDCKEEIDMNDRMGITVRKAEPLIAVPKRC  514 (515)
Q Consensus       435 R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  514 (515)
                      ||+++......++.+|+|||+|+|.|+|++||++|+|+++++||++|+|++..+..  ......++++++.+++|++++|
T Consensus       418 Rf~~~~~~~~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~--~~~~~~~~l~~~~gl~v~~~~r  495 (497)
T KOG0157|consen  418 RFLDGEEKAKRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDK--PKPVPELTLRPKNGLKVKLRPR  495 (497)
T ss_pred             ccCCCCCcCCCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCC--ceeeeEEEEEecCCeEEEEEeC
Confidence            99975433344568999999999999999999999999999999999999884222  4445789999999999999998


Q ss_pred             C
Q 036305          515 K  515 (515)
Q Consensus       515 ~  515 (515)
                      .
T Consensus       496 ~  496 (497)
T KOG0157|consen  496 G  496 (497)
T ss_pred             C
Confidence            4


No 15 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.5e-74  Score=528.99  Aligned_cols=454  Identities=25%  Similarity=0.416  Sum_probs=384.5

Q ss_pred             CCCCCCCCCCCCCeeeeccCC----CCCchHHHHHHHHHhCCeeEEe-cCCeeEEEecCHHHHHHHHHhcCcccCCCC-C
Q 036305           44 RPKQHPPGPPGWPIIGNMFDL----GTVPHRTLTELRQKYGDVIWLK-FGAINTMVILSAKAATDFFKNHDSTFAERK-V  117 (515)
Q Consensus        44 ~~~~~pPgp~~~p~iG~~~~~----~~~~~~~~~~~~~kyG~v~~i~-~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~-~  117 (515)
                      ++....|||+++|++|.+..+    ..+.++....+++|||+||+.. +|+...|.|.||++++.+|++++ .++.|+ .
T Consensus        47 r~~~~IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG-~~P~Rp~~  125 (519)
T KOG0159|consen   47 RPFEEIPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEG-KYPFRPLL  125 (519)
T ss_pred             CChhhcCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCC-CCCCcccc
Confidence            455778999999999987743    2577899999999999999999 89999999999999999999874 456664 2


Q ss_pred             cccee--eeecCCcccccCCCChHHHHHHHhHHhhhcchHHHHHcHHHHHHHHHHHHHHHHHhcC------CcchHHHHH
Q 036305          118 TETMR--VHGYDKSSLALAPYGAFWRVLRRLVTVEMLVTKRINETASVRRKCVNDMLLWIEQEAS------GVHVARLVF  189 (515)
Q Consensus       118 ~~~~~--~~~~~~~~~~~~~~~~~w~~~R~~l~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~------~vd~~~~~~  189 (515)
                      ...+.  -..+++..+++..+|+.|++.|..+++..++++.++.|.+.+++.+++++..++...+      +.|+.+.++
T Consensus       126 ~~~w~~~rd~~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~l~  205 (519)
T KOG0159|consen  126 IEPWVAYRDFRGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQELY  205 (519)
T ss_pred             cchhhhhHHhhccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccccchhHHHHHH
Confidence            22221  1224566777888899999999999999999999999999999999999998887543      789999999


Q ss_pred             HHHHHHHHHHHhhhccccccC---CchHHHHHHHHHHHHHhcCCCcccccccccccCchhHHHHHHHHHHHHHHHHHHHH
Q 036305          190 LSTFNLLGNLMLSRDLLDRES---NDGAEFFQAMMGLMEWSGHANLADFFPILRRLDPQGLRRKMERDVGKALEIASKFV  266 (515)
Q Consensus       190 ~~~~~~i~~~~fg~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i  266 (515)
                      .++++.||.++||+++++...   ++...+.+++..++......   .+.|-+.++.+++.+++..++.+.+.+++++.|
T Consensus       206 ~wslEsi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~l---~~~p~l~r~~~t~~wk~~~~~~D~i~~~~~~~I  282 (519)
T KOG0159|consen  206 RWSLESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQL---MLMPSLWRYFPTKVWKDFVRAWDQIFDVGDKYI  282 (519)
T ss_pred             HHHHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHHH---HhcchHHHhCCChHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999987653   45677888888888766543   455655444477789999999999999999999


Q ss_pred             HHHHHhhccccCCCCccccccHHHHHHhcccCCCCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHH
Q 036305          267 KERLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNK  346 (515)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~  346 (515)
                      +++.++..++.+..  .+...++-.++...        .++.+++..+++++++||+|||++++.|+||+|++||++|++
T Consensus       283 d~~l~~l~~~~~~~--~~~~~~l~~~L~~~--------~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~  352 (519)
T KOG0159|consen  283 DNALEELEKQDSAG--SEYTGSLLELLLRK--------ELSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQR  352 (519)
T ss_pred             HHHHHHHHhccccc--cchhHHHHHHHHHc--------cCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHH
Confidence            99995543321110  12233343333321        588899999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcC-CCCCCcccCCCChhHHHHHHhhccCCCCCcCCCcccccccccccceecCCCCEEEeehhhhcCCCCCC
Q 036305          347 AKAELAQAVGA-DRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVW  425 (515)
Q Consensus       347 l~~Ei~~~~~~-~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~  425 (515)
                      |++|+..+... +..++.+++.+||||.|||||++||||.+++ ..|...+|.+++||.||+||.|.++.+...+||++|
T Consensus       353 L~~Ei~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~-~~R~l~~D~vL~gY~vPagT~V~l~~~~~~r~~~~F  431 (519)
T KOG0159|consen  353 LREEILAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPG-NGRVLPKDLVLSGYHVPAGTLVVLFLYVLGRNPAYF  431 (519)
T ss_pred             HHHHHHhhCCCcccccchHHHhhCHHHHHHHHhhhceeccccc-cccccchhceeccceecCCCeEEEeehhhccChhhC
Confidence            99999999987 5789999999999999999999999999998 679999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCccCCCcceeccCCCCCCCCCHHHHHHHHHHHHHHHHhhceeeeCCCccccccccccceeeccC
Q 036305          426 DEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDWELDCKEEIDMNDRMGITVRKAE  505 (515)
Q Consensus       426 ~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~  505 (515)
                      ++|++|+|||||+++- ...++..++|||.|+|+|+||++|.+|+.+++|+|+++|+++....++  ......+++.|..
T Consensus       432 ~~p~~F~PeRWL~~~~-~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~~p--v~~~~~~il~P~~  508 (519)
T KOG0159|consen  432 PDPEEFLPERWLKPST-KTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHEEP--VEYVYRFILVPNR  508 (519)
T ss_pred             CCccccChhhhccccc-CCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCCCC--ccceeEEEEcCCC
Confidence            9999999999998753 456788999999999999999999999999999999999999874344  4445789999999


Q ss_pred             CeeeeeccCC
Q 036305          506 PLIAVPKRCK  515 (515)
Q Consensus       506 ~~~v~~~~r~  515 (515)
                      ++..++++|+
T Consensus       509 ~l~f~f~~r~  518 (519)
T KOG0159|consen  509 PLRFKFRPRN  518 (519)
T ss_pred             CcceeeeeCC
Confidence            9999999885


No 16 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=1.5e-73  Score=559.56  Aligned_cols=450  Identities=29%  Similarity=0.502  Sum_probs=359.1

Q ss_pred             CCCCCCCCeeeeccCCC-CCchHHHHHHHHHhCCeeEEecCCeeEEEecCHHHHHHHHHhcCcccCCCCCccceeeeecC
Q 036305           49 PPGPPGWPIIGNMFDLG-TVPHRTLTELRQKYGDVIWLKFGAINTMVILSAKAATDFFKNHDSTFAERKVTETMRVHGYD  127 (515)
Q Consensus        49 pPgp~~~p~iG~~~~~~-~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  127 (515)
                      ||||+++|++||++++. ++++..+.+|+++||++|++++|+.++++|+||+.+++++.++...|++++.......+..+
T Consensus         1 ppgp~~lP~iG~l~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~~~~~   80 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLKEKKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTVLTRD   80 (466)
T ss_pred             CcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHHHhcC
Confidence            78999999999998886 45899999999999999999999999999999999999999887788777644333222222


Q ss_pred             CcccccCCCChHHHHHHHhHHhhhcchHHHHHcHHHHHHHHHHHHHHHHHh-----cCCcchHHHHHHHHHHHHHHHHhh
Q 036305          128 KSSLALAPYGAFWRVLRRLVTVEMLVTKRINETASVRRKCVNDMLLWIEQE-----ASGVHVARLVFLSTFNLLGNLMLS  202 (515)
Q Consensus       128 ~~~~~~~~~~~~w~~~R~~l~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~-----~~~vd~~~~~~~~~~~~i~~~~fg  202 (515)
                      +..+++..+|+.|+++||.+.+++++...++.+.+.+.+.++.+++.+.+.     ++++|+.+.+..+++|+++.++||
T Consensus        81 ~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG  160 (466)
T PLN02655         81 KSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSLIQALG  160 (466)
T ss_pred             CCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHHHHHhc
Confidence            223444456899999999887688998888888888888888887777542     227999999999999999999999


Q ss_pred             hccccccCCch-------HHHHHHHHHHHHHhcCCCcccccccccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 036305          203 RDLLDRESNDG-------AEFFQAMMGLMEWSGHANLADFFPILRRLDPQGLRRKMERDVGKALEIASKFVKERLEQKDK  275 (515)
Q Consensus       203 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  275 (515)
                      .++.....+..       ..+...+..+............+|+++++......+...+....+.+++++++++++++.. 
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-  239 (466)
T PLN02655        161 EDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPNKSFETRVQTTEFRRTAVMKALIKQQKKRIA-  239 (466)
T ss_pred             cccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhc-
Confidence            98854321111       2233344444443333333456777665532223333334444556777788877763221 


Q ss_pred             ccCCCCccccccHHHHHHhcccCCCCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHHh
Q 036305          276 NVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAV  355 (515)
Q Consensus       276 ~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~  355 (515)
                           ...+..|+++.+++...       .++++++.+++.++++||+|||+++++|++++|+.||++|+++++||+++.
T Consensus       240 -----~~~~~~d~l~~ll~~~~-------~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~  307 (466)
T PLN02655        240 -----RGEERDCYLDFLLSEAT-------HLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVC  307 (466)
T ss_pred             -----CCCCcccHHHHHHhccC-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHh
Confidence                 11134589999997541       589999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCcccCCCChhHHHHHHhhccCCCCCcCCCcccccccccccceecCCCCEEEeehhhhcCCCCCCCCCCCCCCCC
Q 036305          356 GADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPER  435 (515)
Q Consensus       356 ~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R  435 (515)
                      +++. ++++++++||||+||++|+||++|+++...+|.+.+|++++||.||+|+.|.++.+.+||||++|+||++|+|||
T Consensus       308 ~~~~-~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~PeR  386 (466)
T PLN02655        308 GDER-VTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDPER  386 (466)
T ss_pred             CCCC-CCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCcccCCChhccCccc
Confidence            8644 999999999999999999999999999866899999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCccCCCcceeccCCCCCCCCCHHHHHHHHHHHHHHHHhhceeeeCCCccccccccccceeeccCCeeeeeccC
Q 036305          436 FLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDWELDCKEEIDMNDRMGITVRKAEPLIAVPKRC  514 (515)
Q Consensus       436 ~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  514 (515)
                      |++.... ......++|||+|+|.|||++||.+|+++++++||++|+|++.++.. ......+++..+++++.|++++|
T Consensus       387 ~~~~~~~-~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~r  463 (466)
T PLN02655        387 FLGEKYE-SADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDE-EKEDTVQLTTQKLHPLHAHLKPR  463 (466)
T ss_pred             cCCCCcc-cCCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCc-cccchhheeEeecCCcEEEEeec
Confidence            9975321 12336799999999999999999999999999999999999873222 12234578888989999999887


No 17 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=2.1e-74  Score=514.37  Aligned_cols=444  Identities=24%  Similarity=0.370  Sum_probs=359.0

Q ss_pred             CCCCCCCCC-CeeeeccCCCCCchHHHHHHHHHhCCeeEEecCCeeEEEecCHHHHHHHHHhcCcccCCCCCccceeeee
Q 036305           47 QHPPGPPGW-PIIGNMFDLGTVPHRTLTELRQKYGDVIWLKFGAINTMVILSAKAATDFFKNHDSTFAERKVTETMRVHG  125 (515)
Q Consensus        47 ~~pPgp~~~-p~iG~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~  125 (515)
                      ..||.-++| ||+|++..|+++|.+++++.++|||+||++.++|+.+.++.||+....+++.+...++....+.......
T Consensus        31 ~~PPli~gwiP~lG~a~~fgk~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l~~~v  110 (486)
T KOG0684|consen   31 KEPPLIKGWIPWLGSALAFGKDPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKLTTPV  110 (486)
T ss_pred             CCCcccccCcchhhHHHHhccCHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHhhhhh
Confidence            688888765 9999999999999999999999999999999999999999999999999988644443332222222222


Q ss_pred             cCCcccccCCCChHHHHHHHhHHhhhcchHHHHHcHHHHHHHHHHHHHH-HHHhcCCcchHHHHHHHHHHHHHHHHhhhc
Q 036305          126 YDKSSLALAPYGAFWRVLRRLVTVEMLVTKRINETASVRRKCVNDMLLW-IEQEASGVHVARLVFLSTFNLLGNLMLSRD  204 (515)
Q Consensus       126 ~~~~~~~~~~~~~~w~~~R~~l~~~~~~~~~l~~~~~~~~~~~~~l~~~-l~~~~~~vd~~~~~~~~~~~~i~~~~fg~~  204 (515)
                      + +++.+....+....++.+++. ..+...+++.+.+.+.+++++.++. |.+.+..-.+..+++.+.+.+.-.+++|+.
T Consensus       111 F-g~~v~~d~~~~~~~e~~~~~k-~~L~~~~lk~~~e~m~~el~~~f~~~~~~s~~~d~l~~~~~~ii~tAs~~ll~~e~  188 (486)
T KOG0684|consen  111 F-GKGVVYDVPNHVMMEQKKFFK-SALGGVALKSLVELMLEELHAYFETSLGESGETDGLYTFCRLIIFTASRLLLGGEV  188 (486)
T ss_pred             c-CCCccccCCCchHHHHHHHHH-HHhchhhHHHHHHHHHHHHHHHHhcccccccchhHhhhhhHHHhhhhHHHhhhhhh
Confidence            2 455666666777788888887 8899999999999999999999887 555332555677777777877777778877


Q ss_pred             cccccCCchHHHHHHHHHHHHHhcCCCcccccccccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCccc
Q 036305          205 LLDRESNDGAEFFQAMMGLMEWSGHANLADFFPILRRLDPQGLRRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEK  284 (515)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  284 (515)
                      ....+ +   +....+.++.....  .+...||.  ++ |....+...++++++.+++...+.+|+ +.       ....
T Consensus       189 r~~~d-~---~~a~l~~dLd~~F~--~~d~~FP~--~L-P~~~~r~~~ra~~~i~k~f~~~i~~rr-~s-------~s~~  251 (486)
T KOG0684|consen  189 RDQLD-A---DVAKLYHDLDQGFQ--PFDFLFPY--NL-PIPLLRRRDRARKKISKIFSKIILDRR-AS-------ISKW  251 (486)
T ss_pred             hhhhc-c---hHHHHHHHHhcccc--chHhhccc--CC-CcchhhhHHHHHHHHHHHHHHHHHHHH-hc-------cccc
Confidence            74433 2   33333333333222  22346673  22 555667777999999999999999998 43       2235


Q ss_pred             cccHHHHHHhcccCCCCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCCC-CCCc
Q 036305          285 RKDFLDVMLDFEGNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADR-TFEE  363 (515)
Q Consensus       285 ~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~-~~~~  363 (515)
                      .+|+++.+++-..+    +.+.+++|+++.++.++|||++||+++.+|++++|++|||+++.+++|+++++|... .+++
T Consensus       252 ~~dmlq~l~~~y~d----g~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~~~~~l~~  327 (486)
T KOG0684|consen  252 DNDMLQSLMEKYKD----GRPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGEKKEKLTY  327 (486)
T ss_pred             cHHHHHHHHHHhhc----CCcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccCCCCCH
Confidence            67899999983332    447999999999999999999999999999999999999999999999999998754 4999


Q ss_pred             ccCCCChhHHHHHHhhccCCCCCcCCCcccccccccccc----eecCCCCEEEeehhhhcCCCCCCCCCCCCCCCCCCCC
Q 036305          364 DDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQG----YHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPERFLGS  439 (515)
Q Consensus       364 ~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g----~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~  439 (515)
                      +.|++||+|++||+|||||+||.+. +.|.+.+|.++.+    |.||+|..|.+++..+|+||+||+||++|+|+||+++
T Consensus       328 d~L~~lplL~~~IkEtLRL~~p~~~-~~R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~dRf~~~  406 (486)
T KOG0684|consen  328 DQLKDLPLLDSCIKETLRLHPPAHS-LMRKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKPDRFLKD  406 (486)
T ss_pred             HHHhcchHHHHHHHHHHhcCCchhh-HHHhhccceeeccCCcceecCCCCEEEeccccccCCccccCChhhCChhhccCC
Confidence            9999999999999999999998888 5699999998865    9999999999999999999999999999999999977


Q ss_pred             CCCcc--CCC--cceeccCCCCCCCCCHHHHHHHHHHHHHHHHhhceeeeCCCccccccccccceeeccCCeeeeeccCC
Q 036305          440 TVDYK--GQN--YELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDWELDCKEEIDMNDRMGITVRKAEPLIAVPKRCK  515 (515)
Q Consensus       440 ~~~~~--~~~--~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  515 (515)
                      +++.+  +..  ..++|||+|+|.|||++||.+|||.++..+|++||+++.+++.+..+ ...+++.|..++.|++|+|.
T Consensus       407 ~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~~~P~~d-~s~~v~~P~g~v~irYK~R~  485 (486)
T KOG0684|consen  407 NGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDGPFPEVD-YSRMVMQPEGDVRIRYKRRP  485 (486)
T ss_pred             CcccccccccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCCCCCCCC-HHHhhcCCCCCceEEEeecC
Confidence            65431  222  34699999999999999999999999999999999999964333332 34579999999999999984


No 18 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=2.3e-72  Score=554.81  Aligned_cols=463  Identities=26%  Similarity=0.496  Sum_probs=350.9

Q ss_pred             CCCCCCCCCCCCeeeeccCCCC-Cch-HHHHHHHHHh-CCeeEEecCCeeEEEecCHHHHHHHHHhcCcccCCCCCccce
Q 036305           45 PKQHPPGPPGWPIIGNMFDLGT-VPH-RTLTELRQKY-GDVIWLKFGAINTMVILSAKAATDFFKNHDSTFAERKVTETM  121 (515)
Q Consensus        45 ~~~~pPgp~~~p~iG~~~~~~~-~~~-~~~~~~~~ky-G~v~~i~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~  121 (515)
                      ..+.||||+++|++||++.+.. .+. .+++++.++| |+||++++|+.++++|+||+.+++++.++...|++++.....
T Consensus        38 ~~~~PPgp~~~P~iGnl~~l~~~~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~~  117 (534)
T PLN03018         38 SRQLPPGPPGWPILGNLPELIMTRPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLSIM  117 (534)
T ss_pred             CCCCCcCCCCCCeeccHHHhccCCCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchhh
Confidence            3457999999999999988743 343 4566777776 799999999999999999999999999887778887754433


Q ss_pred             eeeecCCcccccCCCChHHHHHHHhHHhhhcchHHHHHcHHHHHHHHHHHHHHHHHhc---CCcchHHHHHHHHHHHHHH
Q 036305          122 RVHGYDKSSLALAPYGAFWRVLRRLVTVEMLVTKRINETASVRRKCVNDMLLWIEQEA---SGVHVARLVFLSTFNLLGN  198 (515)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~w~~~R~~l~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~---~~vd~~~~~~~~~~~~i~~  198 (515)
                      ...+.++.++++..+|+.|+++|+++.+.+++......+.++...+++.+++.+.+..   +++|+.+.+..+++|+++.
T Consensus       118 ~~l~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~~  197 (534)
T PLN03018        118 ETIGDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQRSETVDVRELSRVYGYAVTMR  197 (534)
T ss_pred             hhhccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeHHHHHHHHHHHHHHH
Confidence            3333223356666679999999999984445555555566666677888999887632   2799999999999999999


Q ss_pred             HHhhhccccccC------CchHHHHHHHHHHHHH---hcCCCcccccc-cccccCchhHHHHHHHHHHHHHHHHHHHHHH
Q 036305          199 LMLSRDLLDRES------NDGAEFFQAMMGLMEW---SGHANLADFFP-ILRRLDPQGLRRKMERDVGKALEIASKFVKE  268 (515)
Q Consensus       199 ~~fg~~~~~~~~------~~~~~~~~~~~~~~~~---~~~~~~~~~~P-~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  268 (515)
                      ++||.++.....      .....+...+......   .......+.+| ++.++.......+.......+.+++.+++++
T Consensus       198 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  277 (534)
T PLN03018        198 MLFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWNIDGQEERAKVNVNLVRSYNNPIIDE  277 (534)
T ss_pred             HHhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhcccchHHHHHHHHHHHHHHHHHHHHH
Confidence            999999853211      1111122222222211   11111223334 4432211122334444566788888888888


Q ss_pred             HHHhhccccCCCCccccccHHHHHHhcccCCCCCCC-CCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHH
Q 036305          269 RLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPA-KVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKA  347 (515)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~-~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l  347 (515)
                      +++...+..   ......|+++.+++..+++   +. .++++++++++..+++||+|||+++++|++++|++||++|+++
T Consensus       278 ~~~~~~~~~---~~~~~~d~l~~ll~~~~~~---~~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl  351 (534)
T PLN03018        278 RVELWREKG---GKAAVEDWLDTFITLKDQN---GKYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKA  351 (534)
T ss_pred             HHHHhhhcc---CCCCcccHHHHHHHhhccc---CCCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHH
Confidence            873221110   1112468999999865432   22 4899999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCCCcccCCCChhHHHHHHhhccCCCCCcCCCcccccccccccceecCCCCEEEeehhhhcCCCCCCCC
Q 036305          348 KAELAQAVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDE  427 (515)
Q Consensus       348 ~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~  427 (515)
                      ++||+++++.++.++.+++.+||||+|||+|+||++|+++...+|.+.+|++++||.||+|+.|.++.+.+|+||++|+|
T Consensus       352 ~~Ei~~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~V~~~~~~~~~dp~~~~~  431 (534)
T PLN03018        352 LKELDEVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIWKD  431 (534)
T ss_pred             HHHHHHHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCCCEEEEChHHhcCCcccCCC
Confidence            99999999877788999999999999999999999999998667999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCc-----cCCCcceeccCCCCCCCCCHHHHHHHHHHHHHHHHhhceeeeCCC-cccccccccccee
Q 036305          428 PWSFKPERFLGSTVDY-----KGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDWELDCK-EEIDMNDRMGITV  501 (515)
Q Consensus       428 p~~F~p~R~l~~~~~~-----~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~-~~~~~~~~~~~~~  501 (515)
                      |++|+||||++.+...     ...+..++|||+|+|.|||++||.+|+++++++||++|+|++++. .++......+.+.
T Consensus       432 p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~  511 (534)
T PLN03018        432 PLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQDFGPLSLEEDDASLL  511 (534)
T ss_pred             ccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCCCCCCCCcccccccee
Confidence            9999999999653211     123467999999999999999999999999999999999998732 2333332334444


Q ss_pred             eccCCeeeeeccC
Q 036305          502 RKAEPLIAVPKRC  514 (515)
Q Consensus       502 ~~~~~~~v~~~~r  514 (515)
                      . +.+++|++++|
T Consensus       512 ~-p~~~~v~~~~R  523 (534)
T PLN03018        512 M-AKPLLLSVEPR  523 (534)
T ss_pred             c-CCCeEEEEEec
Confidence            4 46999999988


No 19 
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=8.9e-73  Score=558.13  Aligned_cols=440  Identities=23%  Similarity=0.335  Sum_probs=340.1

Q ss_pred             hcCCCCCCCCCCCCCCeeeeccCCC-----CCchHHHHHHHHHhCCeeEEecCCeeEEEecCHHHHHHHHHhcCcccCCC
Q 036305           41 KSSRPKQHPPGPPGWPIIGNMFDLG-----TVPHRTLTELRQKYGDVIWLKFGAINTMVILSAKAATDFFKNHDSTFAER  115 (515)
Q Consensus        41 ~~~~~~~~pPgp~~~p~iG~~~~~~-----~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~  115 (515)
                      .+.++.+.||||+++|++||++.+.     +.+++++.+++++||++|++++|+.++++|+||+.+++++.++...|.++
T Consensus        32 ~~~~~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~  111 (490)
T PLN02500         32 PKQKRFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECS  111 (490)
T ss_pred             cccCCCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEee
Confidence            3445567899999999999976542     35677899999999999999999999999999999999998876556433


Q ss_pred             CCccceeeeecCCcccccCCCChHHHHHHHhHHhhhcchHHHHH-cHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHH
Q 036305          116 KVTETMRVHGYDKSSLALAPYGAFWRVLRRLVTVEMLVTKRINE-TASVRRKCVNDMLLWIEQEASGVHVARLVFLSTFN  194 (515)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~l~~~~~~~~~l~~-~~~~~~~~~~~l~~~l~~~~~~vd~~~~~~~~~~~  194 (515)
                      ........  .++.++ +..+|+.|+++|+++. +.|++..++. +.+.+.+.+..+++.|... +.+|+.+.+..++++
T Consensus       112 ~~~~~~~~--~g~~~~-~~~~g~~wr~~Rk~~~-~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~vd~~~~~~~~~~~  186 (490)
T PLN02500        112 YPRSIGGI--LGKWSM-LVLVGDMHRDMRSISL-NFLSHARLRTHLLKEVERHTLLVLDSWKEN-STFSAQDEAKKFTFN  186 (490)
T ss_pred             CchHHHHH--hCcccc-cccCCHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHHHhCCC-CCEEehHHHHHHHHH
Confidence            21111111  122234 4447999999999998 8899998887 5677788888888877532 378999999999999


Q ss_pred             HHHHHHhhhccccccCCchHHHHHHHHHHHHHhcCCCcccccccccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 036305          195 LLGNLMLSRDLLDRESNDGAEFFQAMMGLMEWSGHANLADFFPILRRLDPQGLRRKMERDVGKALEIASKFVKERLEQKD  274 (515)
Q Consensus       195 ~i~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  274 (515)
                      ++++++||.+.++.   ...++.+.+..........  ...+|.       ...++..++.+.+.+++.+.+++++++..
T Consensus       187 vi~~~~fg~~~~~~---~~~~~~~~~~~~~~~~~~~--~~~~p~-------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  254 (490)
T PLN02500        187 LMAKHIMSMDPGEE---ETEQLKKEYVTFMKGVVSA--PLNFPG-------TAYRKALKSRATILKFIERKMEERIEKLK  254 (490)
T ss_pred             HHHHHHhCCCCCch---HHHHHHHHHHHHHhhhhcc--hhcCCC-------cccHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            99999999876321   1233333333332221100  011221       11245556778888889999988773221


Q ss_pred             cccCCCCccccccHHHHHHhcccCCCCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHH
Q 036305          275 KNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQA  354 (515)
Q Consensus       275 ~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~  354 (515)
                      +. .  ......|+++.+++..        .++++++++++..+++||+|||+++++|++++|++||++|+|+++||+++
T Consensus       255 ~~-~--~~~~~~d~l~~ll~~~--------~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v  323 (490)
T PLN02500        255 EE-D--ESVEEDDLLGWVLKHS--------NLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEI  323 (490)
T ss_pred             cc-c--CCCCcchHHHHHHhcc--------CCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHH
Confidence            11 0  1113468999999731        58999999999999999999999999999999999999999999999998


Q ss_pred             hc-----CCCCCCcccCCCChhHHHHHHhhccCCCCCcCCCcccccccccccceecCCCCEEEeehhhhcCCCCCCCCCC
Q 036305          355 VG-----ADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPW  429 (515)
Q Consensus       355 ~~-----~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~  429 (515)
                      ++     +++.++++++.+||||+|||+|+||+||+++. ++|.+.+|++++||.||||+.|.++.|.+||||++|+||+
T Consensus       324 ~~~~~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~-~~R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~dP~  402 (490)
T PLN02500        324 ARAKKQSGESELNWEDYKKMEFTQCVINETLRLGNVVRF-LHRKALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQPQ  402 (490)
T ss_pred             hhccccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccC-eeeEeCCCceeCCEEECCCCEEEechhhcccCcccCCCcc
Confidence            64     23468999999999999999999999999998 6799999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCcc------CCCcceeccCCCCCCCCCHHHHHHHHHHHHHHHHhhceeeeCCCccccccccccceeec
Q 036305          430 SFKPERFLGSTVDYK------GQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDWELDCKEEIDMNDRMGITVRK  503 (515)
Q Consensus       430 ~F~p~R~l~~~~~~~------~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~~~~  503 (515)
                      +|+||||++++....      .++..++|||+|+|.|+|++||++|+++++++||++|+|+++++.+...   ...+ .+
T Consensus       403 ~F~PeRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~~~~~---~~~~-~~  478 (490)
T PLN02500        403 LFNPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEADQAFA---FPFV-DF  478 (490)
T ss_pred             ccChhhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCCccee---cccc-cC
Confidence            999999997542211      2346799999999999999999999999999999999999874332211   1233 33


Q ss_pred             cCCeeeeecc
Q 036305          504 AEPLIAVPKR  513 (515)
Q Consensus       504 ~~~~~v~~~~  513 (515)
                      +.++.|++++
T Consensus       479 ~~~l~~~~~~  488 (490)
T PLN02500        479 PKGLPIRVRR  488 (490)
T ss_pred             CCCceEEEEe
Confidence            4588888865


No 20 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=1.1e-72  Score=552.88  Aligned_cols=431  Identities=20%  Similarity=0.287  Sum_probs=341.7

Q ss_pred             CCCCCCCCCCCCCeeeeccCCCCCchHHHHHHHHHhCCeeEEecCCeeEEEecCHHHHHHHHHhcCcccCCCCCccceee
Q 036305           44 RPKQHPPGPPGWPIIGNMFDLGTVPHRTLTELRQKYGDVIWLKFGAINTMVILSAKAATDFFKNHDSTFAERKVTETMRV  123 (515)
Q Consensus        44 ~~~~~pPgp~~~p~iG~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~  123 (515)
                      ...+.||||+++|++||++.+.+++..++++++++||++|++++|+.++++++||+.+++++.++...+..+........
T Consensus        28 ~r~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~  107 (463)
T PLN02774         28 SKKGLPPGTMGWPLFGETTEFLKQGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYPQSMLDI  107 (463)
T ss_pred             CCCCCCCCCCCCCchhhHHHHHHhhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCCHHHHHH
Confidence            34467899999999999988877888999999999999999999999999999999999999887655543322211122


Q ss_pred             eecCCcccccCCCChHHHHHHHhHHhhhcchHHHHH-cHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhh
Q 036305          124 HGYDKSSLALAPYGAFWRVLRRLVTVEMLVTKRINE-TASVRRKCVNDMLLWIEQEASGVHVARLVFLSTFNLLGNLMLS  202 (515)
Q Consensus       124 ~~~~~~~~~~~~~~~~w~~~R~~l~~~~~~~~~l~~-~~~~~~~~~~~l~~~l~~~~~~vd~~~~~~~~~~~~i~~~~fg  202 (515)
                        +++. .+++.+|+.|+++|+.+. +.|++..++. +.+.+.+.++++++.|... +++|+.+.+..+++++++.++||
T Consensus       108 --lg~~-~~~~~~g~~w~~~R~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~g  182 (463)
T PLN02774        108 --LGTC-NIAAVHGSTHRYMRGSLL-SLISPTMIRDHLLPKIDEFMRSHLSGWDGL-KTIDIQEKTKEMALLSALKQIAG  182 (463)
T ss_pred             --hCcc-chhhcCCHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHHhhCCC-CCEEeeHHHHHHHHHHHHHHHcC
Confidence              2233 344557999999999997 8999999886 7888898888888887542 37899999999999999999999


Q ss_pred             hccccccCCchHHHHHHHHHHHHHhcCCCcccccccccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCc
Q 036305          203 RDLLDRESNDGAEFFQAMMGLMEWSGHANLADFFPILRRLDPQGLRRKMERDVGKALEIASKFVKERLEQKDKNVTGTSD  282 (515)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  282 (515)
                      .+....    ..++.+.+..+..   ..   ..+|.  ++ +....++..++.+.+.+++.+.++++. +.       . 
T Consensus       183 ~~~~~~----~~~~~~~~~~~~~---~~---~~~~~--~l-p~~~~~~~~~~~~~~~~~~~~~i~~r~-~~-------~-  240 (463)
T PLN02774        183 TLSKPI----SEEFKTEFFKLVL---GT---LSLPI--DL-PGTNYRSGVQARKNIVRMLRQLIQERR-AS-------G-  240 (463)
T ss_pred             CCChHH----HHHHHHHHHHHhc---cc---ccCCc--CC-CChhhhHHHHHHHHHHHHHHHHHHHHH-hc-------C-
Confidence            865221    1223332222211   10   01121  11 222235556678888888888888876 32       1 


Q ss_pred             cccccHHHHHHhcccCCCCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcC---CC
Q 036305          283 EKRKDFLDVMLDFEGNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGA---DR  359 (515)
Q Consensus       283 ~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~---~~  359 (515)
                      ...+|+++.+++...+    +..++++++.+++.++++||+|||+++++|++++|++||++|+++++|++++.+.   ++
T Consensus       241 ~~~~d~l~~ll~~~~~----~~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~  316 (463)
T PLN02774        241 ETHTDMLGYLMRKEGN----RYKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKRPED  316 (463)
T ss_pred             CCcccHHHHHHhCccC----CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccCCCC
Confidence            1356999999974322    2258999999999999999999999999999999999999999999999999864   35


Q ss_pred             CCCcccCCCChhHHHHHHhhccCCCCCcCCCcccccccccccceecCCCCEEEeehhhhcCCCCCCCCCCCCCCCCCCCC
Q 036305          360 TFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPERFLGS  439 (515)
Q Consensus       360 ~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~  439 (515)
                      .++++++++||||+|||+|+||++|+++. +.|.+.+|++++||.||||+.|.++.+.+|+||++|+||++|+||||++.
T Consensus       317 ~~~~~~l~~lpyl~a~ikE~lRl~P~v~~-~~R~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F~PeRfl~~  395 (463)
T PLN02774        317 PIDWNDYKSMRFTRAVIFETSRLATIVNG-VLRKTTQDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPWRWLDK  395 (463)
T ss_pred             CCCHHHHhcCcHHHHHHHHHHhcCCCCCC-cccccCCCeeECCEEECCCCEEEEehHHhcCCcccCCChhccCchhcCCC
Confidence            68999999999999999999999999987 66999999999999999999999999999999999999999999999965


Q ss_pred             CCCccCCCcceeccCCCCCCCCCHHHHHHHHHHHHHHHHhhceeeeCCCccccccccccceeeccCCeeeeecc
Q 036305          440 TVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDWELDCKEEIDMNDRMGITVRKAEPLIAVPKR  513 (515)
Q Consensus       440 ~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  513 (515)
                      +.  . ....++|||+|+|.|||++||.+|++++++.||++|+|++.++.++..  ..  +..++++++|++++
T Consensus       396 ~~--~-~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~~~~~~--~~--~~~p~~g~~~~~~~  462 (463)
T PLN02774        396 SL--E-SHNYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGDKLMK--FP--RVEAPNGLHIRVSP  462 (463)
T ss_pred             Cc--C-CCccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCCCcccc--CC--CCCCCCCceEEeee
Confidence            31  1 123699999999999999999999999999999999999984333211  12  33367888888874


No 21 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=1.4e-73  Score=566.77  Aligned_cols=452  Identities=32%  Similarity=0.567  Sum_probs=365.9

Q ss_pred             CCCCCCCCeeeeccCCC--CCchHHHHHHHHHhCCeeEEecCCeeEEEecCHHHHHHHHHhcCcccCCCCCccceee--e
Q 036305           49 PPGPPGWPIIGNMFDLG--TVPHRTLTELRQKYGDVIWLKFGAINTMVILSAKAATDFFKNHDSTFAERKVTETMRV--H  124 (515)
Q Consensus        49 pPgp~~~p~iG~~~~~~--~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~~--~  124 (515)
                      ||||+++|++||++.+.  +++++++.++++|||+||++++++.++++|+||+.+++++.++...++.+........  .
T Consensus         1 Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~   80 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRRKGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFRG   80 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHTTHHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHHH
T ss_pred             CcCCCCcCceeEHHHhcCCCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccccccccccccccccccc
Confidence            89999999999998886  6789999999999999999999999999999999999999988656655432222221  1


Q ss_pred             ecCCcccccCCCChHHHHHHHhHHhhhcchH-HHHHcHHHHHHHHHHHHHHHHHhcC---CcchHHHHHHHHHHHHHHHH
Q 036305          125 GYDKSSLALAPYGAFWRVLRRLVTVEMLVTK-RINETASVRRKCVNDMLLWIEQEAS---GVHVARLVFLSTFNLLGNLM  200 (515)
Q Consensus       125 ~~~~~~~~~~~~~~~w~~~R~~l~~~~~~~~-~l~~~~~~~~~~~~~l~~~l~~~~~---~vd~~~~~~~~~~~~i~~~~  200 (515)
                      ...+.++ +..+++.|+.+|+.+. +.|+.. .+ .+.+.+.+.++.+++.|.+..+   .+|+.+++..+++|+++.++
T Consensus        81 ~~~~~~l-~~~~~~~~~~~R~~~~-~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d~i~~~~  157 (463)
T PF00067_consen   81 PFGGKGL-FFSDGERWRRQRRLLA-PAFSSKKIL-KLEPLIDEEAEELIDQLRKKAGSSGPVDLFDWLRRFALDVIGRVL  157 (463)
T ss_dssp             HHTTTSS-TTSSHHHHHHHHHHHH-HHHSHHHHH-HHHHHHHHHHHHHHHHHHHTTTSESEEEHHHHHHHHHHHHHHHHH
T ss_pred             ccccccc-cccccccccccccccc-ccccccccc-ccccccccccccccccccccccccceeeeeccccccccccccccc
Confidence            1224444 4445799999999998 777777 66 9999999999999999998765   59999999999999999999


Q ss_pred             hhhccccccCCchHHHHHHHHHHHHHhcC--CCcccccccccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccC
Q 036305          201 LSRDLLDRESNDGAEFFQAMMGLMEWSGH--ANLADFFPILRRLDPQGLRRKMERDVGKALEIASKFVKERLEQKDKNVT  278 (515)
Q Consensus       201 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  278 (515)
                      ||.+++..+++...++.+.+..+......  ......+|++.++ +....+...++.+.+.+++.+.++++.++...   
T Consensus       158 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---  233 (463)
T PF00067_consen  158 FGKDFGSLDDEDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYL-PTPLFRRFKRARDRLRKYIKEIIEERREELDD---  233 (463)
T ss_dssp             HSSHHHGTTHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTS-SHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHS---
T ss_pred             ccceeeeccccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccc---
Confidence            99998645434345666666666543322  1233456755555 55567777788899999999999998844321   


Q ss_pred             CCCccccccHHHHHHhcc-cCCCCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcC
Q 036305          279 GTSDEKRKDFLDVMLDFE-GNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGA  357 (515)
Q Consensus       279 ~~~~~~~~d~l~~ll~~~-~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~  357 (515)
                        ......|+++.+++.. +...  +.+++.++++.++..+++||++||+.+++|++++|++||++|+++++||+++.++
T Consensus       234 --~~~~~~d~l~~ll~~~~~~~~--~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~  309 (463)
T PF00067_consen  234 --GDESRRDLLDSLLQASSDSDG--PSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLGD  309 (463)
T ss_dssp             --SSSSCSSHHHHHHHHHHTTTT--TSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTT
T ss_pred             --ccccccccccccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence              1236789999999986 2221  2479999999999999999999999999999999999999999999999999977


Q ss_pred             CCCCCcccCCCChhHHHHHHhhccCCCCCcCCCcccccccccccceecCCCCEEEeehhhhcCCCCCCCCCCCCCCCCCC
Q 036305          358 DRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPERFL  437 (515)
Q Consensus       358 ~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l  437 (515)
                      ++.++.+++++||||+|||+|+||++|+++..++|.+++|++++||.||+|+.|.++.+.+|+||++|+||++|+||||+
T Consensus       310 ~~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~P~R~~  389 (463)
T PF00067_consen  310 GREITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFDPERFL  389 (463)
T ss_dssp             SSSHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--TTGGB
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            67899999999999999999999999999965889999999999999999999999999999999999999999999999


Q ss_pred             CCCCCccCCCcceeccCCCCCCCCCHHHHHHHHHHHHHHHHhhceeeeCCCccccccccccceeeccCCeeeee
Q 036305          438 GSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDWELDCKEEIDMNDRMGITVRKAEPLIAVP  511 (515)
Q Consensus       438 ~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  511 (515)
                      +.+......+..++|||+|+|.|||++||++|+++++|+||++|||++++..+............++.++.|++
T Consensus       390 ~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  463 (463)
T PF00067_consen  390 DERGISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSEPEPQEQQNGFLLPPKPLKVKF  463 (463)
T ss_dssp             TTTSTBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSSGGEEECSCSSSEEESSSEEEE
T ss_pred             ccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCCCCCccccCceEeeCCCcEEeC
Confidence            87642234567899999999999999999999999999999999999973222222222213344444776764


No 22 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=1.9e-71  Score=552.31  Aligned_cols=455  Identities=21%  Similarity=0.323  Sum_probs=342.7

Q ss_pred             CCCCCCCCCeeeeccCCCCCchHHHHHHHHHh---CCeeEEecCCeeEEEecCHHHHHHHHHhcCcccCCCCCccc-eee
Q 036305           48 HPPGPPGWPIIGNMFDLGTVPHRTLTELRQKY---GDVIWLKFGAINTMVILSAKAATDFFKNHDSTFAERKVTET-MRV  123 (515)
Q Consensus        48 ~pPgp~~~p~iG~~~~~~~~~~~~~~~~~~ky---G~v~~i~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~-~~~  123 (515)
                      .+|||+++|++||++.+.++ +..+.+|.++|   |++|++++|+.++++++||+.+++++.++...+.++..... ...
T Consensus        31 ~~pgp~~~p~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~~  109 (516)
T PLN03195         31 NRKGPKSWPIIGAALEQLKN-YDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHSYMEV  109 (516)
T ss_pred             ccCCCCCCCeecchHHHHhc-cchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHHHHHH
Confidence            57999999999998766443 44567777787   89999999999999999999999999876445554432211 111


Q ss_pred             eecCCcccccCCCChHHHHHHHhHHhhhcchHHHHHcHHHH-HHHHHHHHHHHHHh---cCCcchHHHHHHHHHHHHHHH
Q 036305          124 HGYDKSSLALAPYGAFWRVLRRLVTVEMLVTKRINETASVR-RKCVNDMLLWIEQE---ASGVHVARLVFLSTFNLLGNL  199 (515)
Q Consensus       124 ~~~~~~~~~~~~~~~~w~~~R~~l~~~~~~~~~l~~~~~~~-~~~~~~l~~~l~~~---~~~vd~~~~~~~~~~~~i~~~  199 (515)
                      .  .+.+ +++.+|+.|+++||++. +.|+.++++.+.+.+ .+.++.+++.+.+.   ++++|+.+++..+++|+++.+
T Consensus       110 ~--~g~~-l~~~~g~~w~~~Rr~l~-~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~  185 (516)
T PLN03195        110 L--LGDG-IFNVDGELWRKQRKTAS-FEFASKNLRDFSTVVFREYSLKLSSILSQASFANQVVDMQDLFMRMTLDSICKV  185 (516)
T ss_pred             H--hcCe-eeccCcHHHHHHHHhcc-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEcHHHHHHHHHHHHHHHH
Confidence            1  1334 45567999999999998 889999999998875 66677777777542   227999999999999999999


Q ss_pred             HhhhccccccCC-chHHHHHHHHHHHHHhcCCCcccccccccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccC
Q 036305          200 MLSRDLLDRESN-DGAEFFQAMMGLMEWSGHANLADFFPILRRLDPQGLRRKMERDVGKALEIASKFVKERLEQKDKNVT  278 (515)
Q Consensus       200 ~fg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  278 (515)
                      +||.+++....+ ....+.+.++......... ....++.+..+......+...+..+.+.+++.+.+++++++..+. .
T Consensus       186 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~  263 (516)
T PLN03195        186 GFGVEIGTLSPSLPENPFAQAFDTANIIVTLR-FIDPLWKLKKFLNIGSEALLSKSIKVVDDFTYSVIRRRKAEMDEA-R  263 (516)
T ss_pred             HhCCCccccccCCCccHHHHHHHHHHHHHHHH-HhcchhhHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-c
Confidence            999998654322 1224444444333211100 000111111111111223445677788888888888877332110 0


Q ss_pred             CCCccccccHHHHHHhcccCCCCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcC-
Q 036305          279 GTSDEKRKDFLDVMLDFEGNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGA-  357 (515)
Q Consensus       279 ~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~-  357 (515)
                      ...+....|+++.+++..++.   +..++++++.++++++++||+|||+++++|++++|++||++|+++++||+++.++ 
T Consensus       264 ~~~~~~~~d~l~~ll~~~~~~---~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~~~  340 (516)
T PLN03195        264 KSGKKVKHDILSRFIELGEDP---DSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKER  340 (516)
T ss_pred             cccccccccHHHHHHhccCCC---CCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhcc
Confidence            001123568999999764332   2369999999999999999999999999999999999999999999999988642 


Q ss_pred             -------------------CCCCCcccCCCChhHHHHHHhhccCCCCCcCCCcccccccccc-cceecCCCCEEEeehhh
Q 036305          358 -------------------DRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNF-QGYHIPKDTQVLVNAWA  417 (515)
Q Consensus       358 -------------------~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i-~g~~ip~G~~v~~~~~~  417 (515)
                                         ++.++++++.+||||+|||+|+||++|+++.. .|.+.+|.++ +||.||+|+.|.++.+.
T Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~-~r~~~~d~~~~~G~~IpkGt~V~~~~~~  419 (516)
T PLN03195        341 AKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQD-PKGILEDDVLPDGTKVKAGGMVTYVPYS  419 (516)
T ss_pred             cccccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcch-hhhhccCcCcCCCcEECCCCEEEEehHh
Confidence                               24578999999999999999999999999994 5777777655 99999999999999999


Q ss_pred             hcCCCCCC-CCCCCCCCCCCCCCCCCccCCCcceeccCCCCCCCCCHHHHHHHHHHHHHHHHhhceeeeCCCcccccccc
Q 036305          418 IGRDPEVW-DEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDWELDCKEEIDMNDR  496 (515)
Q Consensus       418 ~~~d~~~~-~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~  496 (515)
                      +|+||++| +||++|+||||++........+..++|||+|+|.|+|++||++|++++++.|+++|++++++..+.  ...
T Consensus       420 ~h~dp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~~--~~~  497 (516)
T PLN03195        420 MGRMEYNWGPDAASFKPERWIKDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFFKFQLVPGHPV--KYR  497 (516)
T ss_pred             hccChhhhccChhhcCCcccCCCCCcCCCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeEecCCCcc--eee
Confidence            99999999 999999999999643211223457999999999999999999999999999999999998732332  223


Q ss_pred             ccceeeccCCeeeeeccCC
Q 036305          497 MGITVRKAEPLIAVPKRCK  515 (515)
Q Consensus       497 ~~~~~~~~~~~~v~~~~r~  515 (515)
                      ...+..++.+++|++++|.
T Consensus       498 ~~~~~~~~~~~~v~~~~r~  516 (516)
T PLN03195        498 MMTILSMANGLKVTVSRRS  516 (516)
T ss_pred             eeeEEecCCCEEEEEEeCC
Confidence            4567788899999999984


No 23 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=7.4e-71  Score=542.35  Aligned_cols=450  Identities=19%  Similarity=0.312  Sum_probs=339.8

Q ss_pred             CCCCCCCCCCeeeeccCCCCCchH---HHHHHHHHhCCeeE---EecCCeeEEEecCHHHHHHHHHhcCcccCCCCCccc
Q 036305           47 QHPPGPPGWPIIGNMFDLGTVPHR---TLTELRQKYGDVIW---LKFGAINTMVILSAKAATDFFKNHDSTFAERKVTET  120 (515)
Q Consensus        47 ~~pPgp~~~p~iG~~~~~~~~~~~---~~~~~~~kyG~v~~---i~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~  120 (515)
                      +..|||+++|++||++.+..+...   .+.+...+||..++   +|+|+.++++|+||+.+++++.++...|.++.....
T Consensus        31 ~~~p~p~~~pl~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~~~  110 (500)
T PLN02169         31 HGQPILKNWPFLGMLPGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEFKK  110 (500)
T ss_pred             CCCCCCCCCCcccchHHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHHHH
Confidence            368899999999999777543333   33333344886655   678999999999999999999887666666543222


Q ss_pred             eeeeecCCcccccCCCChHHHHHHHhHHhhhcchHHHHHc--HHHHHHHHHHHHHHHHHhc---CCcchHHHHHHHHHHH
Q 036305          121 MRVHGYDKSSLALAPYGAFWRVLRRLVTVEMLVTKRINET--ASVRRKCVNDMLLWIEQEA---SGVHVARLVFLSTFNL  195 (515)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~w~~~R~~l~~~~~~~~~l~~~--~~~~~~~~~~l~~~l~~~~---~~vd~~~~~~~~~~~~  195 (515)
                      ..  ...++++++ .+|+.|+++||++. +.|+...+..+  .+.+.+.++.+++.+++..   ..+|+.+.+..+++|+
T Consensus       111 ~~--~~~g~gl~~-~~g~~Wr~~Rk~l~-p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~dv  186 (500)
T PLN02169        111 IF--DVLGEGILT-VDFELWEDLRKSNH-ALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAHENIIIDLQDVFMRFMFDT  186 (500)
T ss_pred             HH--HhhcCcccc-cCcHHHHHHHHHHH-HHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEeHHHHHHHHHHHH
Confidence            11  112455544 46999999999998 99998887643  3666777788888876532   2799999999999999


Q ss_pred             HHHHHhhhccccccCC-chHHHHHHHHHHHHHhcCCCcccccccccc----cCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 036305          196 LGNLMLSRDLLDRESN-DGAEFFQAMMGLMEWSGHANLADFFPILRR----LDPQGLRRKMERDVGKALEIASKFVKERL  270 (515)
Q Consensus       196 i~~~~fg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~----~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  270 (515)
                      ++.++||.+.++...+ ...++.+.+.........   ..+.|++.+    +.+....++..++.+.+.+++.++|++++
T Consensus       187 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~r~  263 (500)
T PLN02169        187 SSILMTGYDPMSLSIEMLEVEFGEAADIGEEAIYY---RHFKPVILWRLQNWIGIGLERKMRTALATVNRMFAKIISSRR  263 (500)
T ss_pred             HHhheeCCCccccCCCCCCCHHHHHHHHHHHHHHh---HHhccHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999987543211 123454444433322111   122343211    11223456677888999999999999887


Q ss_pred             HhhccccCCCCccccccHHHHHHhcccCCCCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHH
Q 036305          271 EQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAE  350 (515)
Q Consensus       271 ~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~E  350 (515)
                      ++..+..  ..++..+|+++.+++........+..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|
T Consensus       264 ~~~~~~~--~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~Pevq~kl~~E  341 (500)
T PLN02169        264 KEEISRA--ETEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKHPQVMAKIRHE  341 (500)
T ss_pred             HHhhccc--cccCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCCHHHHHHHHHH
Confidence            4321110  01112468999999864321111124788999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCCcccCCCChhHHHHHHhhccCCCCCcCCCccccccccc-ccceecCCCCEEEeehhhhcCCCCCC-CCC
Q 036305          351 LAQAVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTN-FQGYHIPKDTQVLVNAWAIGRDPEVW-DEP  428 (515)
Q Consensus       351 i~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~-i~g~~ip~G~~v~~~~~~~~~d~~~~-~~p  428 (515)
                      |+++      ++++++.+||||+||++|+||+||++|. ..|.+.+|.+ ++||.||+|+.|.++.|.+||||++| +||
T Consensus       342 i~~v------~~~~dl~~L~Yl~avi~EtLRl~P~vp~-~~r~~~~d~~~~~G~~IpkGt~v~i~~~~ihrd~~~w~~dP  414 (500)
T PLN02169        342 INTK------FDNEDLEKLVYLHAALSESMRLYPPLPF-NHKAPAKPDVLPSGHKVDAESKIVICIYALGRMRSVWGEDA  414 (500)
T ss_pred             HHhh------CCHHHHhcCHHHHHHHHHHHhcCCCCCc-CceecCCCCCccCCEEECCCCEEEEcHHHhhCCccccCCCh
Confidence            9886      3678999999999999999999999999 4577777755 59999999999999999999999999 899


Q ss_pred             CCCCCCCCCCCCCCcc-CCCcceeccCCCCCCCCCHHHHHHHHHHHHHHHHhhceeeeCCCccccccccccceeeccCCe
Q 036305          429 WSFKPERFLGSTVDYK-GQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDWELDCKEEIDMNDRMGITVRKAEPL  507 (515)
Q Consensus       429 ~~F~p~R~l~~~~~~~-~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  507 (515)
                      ++||||||++++.+.. ..+..|+|||+|+|.|+|++||++|+|+++++||++|+|++++..++  ....+++++++.++
T Consensus       415 ~~F~PeRfl~~~~~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~~~~~--~~~~~~~l~~~~gl  492 (500)
T PLN02169        415 LDFKPERWISDNGGLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEGHKI--EAIPSILLRMKHGL  492 (500)
T ss_pred             hhcCccccCCCCCCccCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcCCCCc--ccccceEEecCCCE
Confidence            9999999997543322 23568999999999999999999999999999999999998743333  33456889999999


Q ss_pred             eeeeccC
Q 036305          508 IAVPKRC  514 (515)
Q Consensus       508 ~v~~~~r  514 (515)
                      +|++++|
T Consensus       493 ~l~l~~~  499 (500)
T PLN02169        493 KVTVTKK  499 (500)
T ss_pred             EEEEEeC
Confidence            9999987


No 24 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=5e-71  Score=540.66  Aligned_cols=432  Identities=22%  Similarity=0.346  Sum_probs=346.1

Q ss_pred             HHhcCCCCCCCCCCCCCCeeeeccCC-CCCchHHHHHHHHHhCCeeEEecCCeeEEEecCHHHHHHHHHhcCcccCCCCC
Q 036305           39 RIKSSRPKQHPPGPPGWPIIGNMFDL-GTVPHRTLTELRQKYGDVIWLKFGAINTMVILSAKAATDFFKNHDSTFAERKV  117 (515)
Q Consensus        39 ~~~~~~~~~~pPgp~~~p~iG~~~~~-~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~  117 (515)
                      +....+..+.||||+++|++||++.+ .++++.++.+++++||++|++++++.++++++||+.+++++.++...+.  +.
T Consensus        27 ~~~~~~~~~~Ppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~~--~~  104 (463)
T PLN02196         27 RRSSSTKLPLPPGTMGWPYVGETFQLYSQDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLFK--PT  104 (463)
T ss_pred             ccCCCCCCCCCCCCCCCCccchHHHHHhcCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhCCCCccc--cc
Confidence            44444556789999999999998775 5789999999999999999999999999999999999999988765552  22


Q ss_pred             ccceeeeecCCcccccCCCChHHHHHHHhHHhhhcchHHHHHcHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHH
Q 036305          118 TETMRVHGYDKSSLALAPYGAFWRVLRRLVTVEMLVTKRINETASVRRKCVNDMLLWIEQEASGVHVARLVFLSTFNLLG  197 (515)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~w~~~R~~l~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~vd~~~~~~~~~~~~i~  197 (515)
                      ......... +...++..+|+.|+++||++. +.|+++.++.+.+.+.+.+.++++.|..  +.+|+.+++..+++++++
T Consensus       105 ~~~~~~~~~-g~~~l~~~~g~~w~~~Rk~l~-~~f~~~~l~~~~~~i~~~~~~~~~~~~~--~~v~~~~~~~~~~~~v~~  180 (463)
T PLN02196        105 FPASKERML-GKQAIFFHQGDYHAKLRKLVL-RAFMPDAIRNMVPDIESIAQESLNSWEG--TQINTYQEMKTYTFNVAL  180 (463)
T ss_pred             CchHHHHHc-CcccccccCcHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHcCCC--CeEEeHHHHHHHHHHHHH
Confidence            111111122 223345557999999999998 8999999999999999999999988843  278999999999999999


Q ss_pred             HHHhhhccccccCCchHHHHHHHHHHHHHhcCCCcccccccccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 036305          198 NLMLSRDLLDRESNDGAEFFQAMMGLMEWSGHANLADFFPILRRLDPQGLRRKMERDVGKALEIASKFVKERLEQKDKNV  277 (515)
Q Consensus       198 ~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  277 (515)
                      .++||.+....    ..++.+....+...      ...+|+.  + +....++..++.+.+.+++.+.++++. +.    
T Consensus       181 ~~~fG~~~~~~----~~~~~~~~~~~~~~------~~~~~~~--~-p~~~~~~~~~a~~~~~~~~~~~i~~~~-~~----  242 (463)
T PLN02196        181 LSIFGKDEVLY----REDLKRCYYILEKG------YNSMPIN--L-PGTLFHKSMKARKELAQILAKILSKRR-QN----  242 (463)
T ss_pred             HHHcCCCCchH----HHHHHHHHHHHhcc------hhccccc--C-CCccchHHHHHHHHHHHHHHHHHHHHh-hc----
Confidence            99999875211    12222222211110      1122321  1 222235566778888888888888776 32    


Q ss_pred             CCCCccccccHHHHHHhcccCCCCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcC
Q 036305          278 TGTSDEKRKDFLDVMLDFEGNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGA  357 (515)
Q Consensus       278 ~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~  357 (515)
                         . .+..|+++.+++..       .+++++++.++++.+++||+|||+++++|++++|++||++|+++++|++++.+.
T Consensus       243 ---~-~~~~d~l~~ll~~~-------~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~  311 (463)
T PLN02196        243 ---G-SSHNDLLGSFMGDK-------EGLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKD  311 (463)
T ss_pred             ---C-CCcccHHHHHHhcC-------CCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcc
Confidence               1 13468999988631       268999999999999999999999999999999999999999999999998864


Q ss_pred             ---CCCCCcccCCCChhHHHHHHhhccCCCCCcCCCcccccccccccceecCCCCEEEeehhhhcCCCCCCCCCCCCCCC
Q 036305          358 ---DRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPE  434 (515)
Q Consensus       358 ---~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~  434 (515)
                         +..++++++.+||||+|||+|+||++|++++ ..|.+.+|+.++||.||+|+.|.++.+.+|+||++|+||++|+||
T Consensus       312 ~~~~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~-~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~~dP~~F~Pe  390 (463)
T PLN02196        312 KEEGESLTWEDTKKMPLTSRVIQETLRVASILSF-TFREAVEDVEYEGYLIPKGWKVLPLFRNIHHSADIFSDPGKFDPS  390 (463)
T ss_pred             cccCCCCCHHHHhcChHHHHHHHHHHhcCCCccc-cceeeccccccCCEEeCCCCEEEeeHHHhcCCchhcCCcCccChh
Confidence               3568999999999999999999999999998 459999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCccCCCcceeccCCCCCCCCCHHHHHHHHHHHHHHHHhhceeeeCCCccccccccccceeeccCCeeeeeccC
Q 036305          435 RFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDWELDCKEEIDMNDRMGITVRKAEPLIAVPKRC  514 (515)
Q Consensus       435 R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  514 (515)
                      ||++..     .+..++|||+|+|.|+|++||++|+++++++|+++|+|++++++ ....  +..+..|+++++|+++++
T Consensus       391 Rfl~~~-----~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~-~~~~--~~~~~~p~~~~~~~~~~~  462 (463)
T PLN02196        391 RFEVAP-----KPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGTS-NGIQ--YGPFALPQNGLPIALSRK  462 (463)
T ss_pred             hhcCCC-----CCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCCC-CceE--EcccccCCCCceEEEecC
Confidence            999632     34579999999999999999999999999999999999987422 2232  344567888999988764


No 25 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=3.2e-70  Score=534.36  Aligned_cols=438  Identities=22%  Similarity=0.322  Sum_probs=344.0

Q ss_pred             CCCCCCCCCCCCCCeeeeccCC-----CCCchHHHHHHHHHhCCeeEEecCCeeEEEecCHHHHHHHHHhcCcccCCCCC
Q 036305           43 SRPKQHPPGPPGWPIIGNMFDL-----GTVPHRTLTELRQKYGDVIWLKFGAINTMVILSAKAATDFFKNHDSTFAERKV  117 (515)
Q Consensus        43 ~~~~~~pPgp~~~p~iG~~~~~-----~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~  117 (515)
                      .++.+.||||+++|++||++.+     ..+++.++.+++++||+||++++|+.++++|+||+.+++++.++...+..+..
T Consensus         3 ~~~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~   82 (452)
T PLN03141          3 KKKSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYP   82 (452)
T ss_pred             CCCCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCc
Confidence            4567789999999999999877     34688999999999999999999999999999999999999987766654432


Q ss_pred             ccceeeeecCCcccccCCCChHHHHHHHhHHhhhcchHHHHH-cHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHH
Q 036305          118 TETMRVHGYDKSSLALAPYGAFWRVLRRLVTVEMLVTKRINE-TASVRRKCVNDMLLWIEQEASGVHVARLVFLSTFNLL  196 (515)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~w~~~R~~l~~~~~~~~~l~~-~~~~~~~~~~~l~~~l~~~~~~vd~~~~~~~~~~~~i  196 (515)
                      . ..... .|. +.++..+|+.|+++|+++. +.|+...++. ..+.+.+.++++++.|.+ ++.+|+.+.+..++++++
T Consensus        83 ~-~~~~l-~g~-~~~~~~~g~~wr~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~vi  157 (452)
T PLN03141         83 K-SLTEL-MGK-SSILLINGSLQRRVHGLIG-AFLKSPHLKAQITRDMERYVSESLDSWRD-DPPVLVQDETKKIAFEVL  157 (452)
T ss_pred             h-hHHHH-hCc-ccccccCcHHHHHHHHHHH-HhcCcHHHHHHHHHHHHHHHHHHHHhccC-CCCEEhHHHHHHHHHHHH
Confidence            1 11111 222 3345557999999999998 7788777766 356777777777776642 237899999999999999


Q ss_pred             HHHHhhhccccccCCchHHHHHHHHHHHHHhcCCCcccccccccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 036305          197 GNLMLSRDLLDRESNDGAEFFQAMMGLMEWSGHANLADFFPILRRLDPQGLRRKMERDVGKALEIASKFVKERLEQKDKN  276 (515)
Q Consensus       197 ~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  276 (515)
                      ++++||.+.+.    ...++.+.+..+.....      .+|..  + +.....+..++.+++.+++.+.|+++++.....
T Consensus       158 ~~~~~G~~~~~----~~~~~~~~~~~~~~~~~------~~~~~--~-p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~  224 (452)
T PLN03141        158 VKALISLEPGE----EMEFLKKEFQEFIKGLM------SLPIK--L-PGTRLYRSLQAKKRMVKLVKKIIEEKRRAMKNK  224 (452)
T ss_pred             HHHHcCCCchH----HHHHHHHHHHHHhhhHH------hCccC--C-CchHhHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            99999987632    12233333333222111      12211  1 222223455678899999999998887332111


Q ss_pred             cCCCCccccccHHHHHHhcccCCCCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhc
Q 036305          277 VTGTSDEKRKDFLDVMLDFEGNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVG  356 (515)
Q Consensus       277 ~~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~  356 (515)
                      .. .......|+++.+++...      ..+++++++.+++.+++||+|||+++++|++++|++||++|+++++|++++.+
T Consensus       225 ~~-~~~~~~~d~l~~ll~~~~------~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~~~  297 (452)
T PLN03141        225 EE-DETGIPKDVVDVLLRDGS------DELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKLKR  297 (452)
T ss_pred             Cc-cccCChhhHHHHHHhcCC------CCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHh
Confidence            00 000124689999997542      25899999999999999999999999999999999999999999999998863


Q ss_pred             ----CCCCCCcccCCCChhHHHHHHhhccCCCCCcCCCcccccccccccceecCCCCEEEeehhhhcCCCCCCCCCCCCC
Q 036305          357 ----ADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFK  432 (515)
Q Consensus       357 ----~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~  432 (515)
                          .+..++.+++.+||||+|||+|++|+||+++. ++|.+.+|++++||.||+|+.|+++.+.+|+||++|+||++|+
T Consensus       298 ~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~-~~R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~dP~~F~  376 (452)
T PLN03141        298 LKADTGEPLYWTDYMSLPFTQNVITETLRMGNIING-VMRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDNPYQFN  376 (452)
T ss_pred             ccCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCC-cceeecCCeeECCEEECCCCEEEEehHhccCCchhcCCccccC
Confidence                23458999999999999999999999999986 7899999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCccCCCcceeccCCCCCCCCCHHHHHHHHHHHHHHHHhhceeeeCCCccccccccccceeeccCCeeeeec
Q 036305          433 PERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDWELDCKEEIDMNDRMGITVRKAEPLIAVPK  512 (515)
Q Consensus       433 p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  512 (515)
                      ||||++.+    ..+..++|||+|+|.|+|++||.+|+++++|.||++|+|+.+++...     ...++.+..++.|+++
T Consensus       377 PeRfl~~~----~~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~~~-----~~~~~~~~~~~~~~~~  447 (452)
T PLN03141        377 PWRWQEKD----MNNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEEDTIV-----NFPTVRMKRKLPIWVT  447 (452)
T ss_pred             cccccCCC----CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCCCee-----ecccccCCCCceEEEE
Confidence            99999753    13457999999999999999999999999999999999997743221     1247788889999999


Q ss_pred             cCC
Q 036305          513 RCK  515 (515)
Q Consensus       513 ~r~  515 (515)
                      +|+
T Consensus       448 ~~~  450 (452)
T PLN03141        448 RID  450 (452)
T ss_pred             eCC
Confidence            985


No 26 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=2.2e-69  Score=526.80  Aligned_cols=441  Identities=24%  Similarity=0.322  Sum_probs=342.5

Q ss_pred             HHHHhcCCCCCCCCCCCCCCeeeeccCCC-----CCchHHHHHHHHHhCCeeEEecCCeeEEEecCHHHHHHHHHhcCcc
Q 036305           37 LLRIKSSRPKQHPPGPPGWPIIGNMFDLG-----TVPHRTLTELRQKYGDVIWLKFGAINTMVILSAKAATDFFKNHDST  111 (515)
Q Consensus        37 ~~~~~~~~~~~~pPgp~~~p~iG~~~~~~-----~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~i~~~~~~~  111 (515)
                      +.++-+..+.+.||||.++|++||++.+.     +++..++.++.++||++|++++++.++++|+||+.+++++.++...
T Consensus        20 ~~~~~~~~~~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~il~~~~~~   99 (472)
T PLN02987         20 LLRRTRYRRMRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRFILQNEGKL   99 (472)
T ss_pred             HHHhhccCCCCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHHHHhCCCce
Confidence            33333345567899999999999998762     4688999999999999999999999999999999999999987666


Q ss_pred             cCCCCCccceeeeecCCcccccCCCChHHHHHHHhHHhhhcchHHHHHcHH-HHHHHHHHHHHHHHHhcCCcchHHHHHH
Q 036305          112 FAERKVTETMRVHGYDKSSLALAPYGAFWRVLRRLVTVEMLVTKRINETAS-VRRKCVNDMLLWIEQEASGVHVARLVFL  190 (515)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~l~~~~~~~~~l~~~~~-~~~~~~~~l~~~l~~~~~~vd~~~~~~~  190 (515)
                      |.+++.......+  |++++++. +|+.|+++|+++. ++++.+.++.+.. .+.+.++..++.|.   +++++.+.+..
T Consensus       100 f~~~~~~~~~~~l--g~~~l~~~-~g~~wr~~R~~~~-~f~~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~~~~  172 (472)
T PLN02987        100 FECSYPGSISNLL--GKHSLLLM-KGNLHKKMHSLTM-SFANSSIIKDHLLLDIDRLIRFNLDSWS---SRVLLMEEAKK  172 (472)
T ss_pred             EEecCcHHHHHHh--Cccccccc-CcHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHHhhc---cceehHHHHHH
Confidence            6544322122222  34455454 6999999999986 6555555554332 23334444444442   36899999999


Q ss_pred             HHHHHHHHHHhhhccccccCCchHHHHHHHHHHHHHhcCCCcccccccccccCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 036305          191 STFNLLGNLMLSRDLLDRESNDGAEFFQAMMGLMEWSGHANLADFFPILRRLDPQGLRRKMERDVGKALEIASKFVKERL  270 (515)
Q Consensus       191 ~~~~~i~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  270 (515)
                      ++++++++++||.+....    ...+.+.+.......    ....+|++     ....++..++.+++.+++.+.+++++
T Consensus       173 ~t~~vi~~~~fg~~~~~~----~~~~~~~~~~~~~~~----~~~~~p~l-----~~~~~~~~~~~~~~~~~~~~~i~~r~  239 (472)
T PLN02987        173 ITFELTVKQLMSFDPGEW----TESLRKEYVLVIEGF----FSVPLPLF-----STTYRRAIQARTKVAEALTLVVMKRR  239 (472)
T ss_pred             HHHHHHHHHHcCCCChHH----HHHHHHHHHHHHhhh----hcCCCcCC-----CchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999876321    122322222222111    12234543     12346677788999999999999887


Q ss_pred             HhhccccCCCCccccccHHHHHHhcccCCCCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHH
Q 036305          271 EQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAE  350 (515)
Q Consensus       271 ~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~E  350 (515)
                      +....     +.....|+++.+++..  +     +++++++.+++..+++||+|||+++++|++++|+.||++|+++++|
T Consensus       240 ~~~~~-----~~~~~~d~l~~ll~~~--~-----~~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E  307 (472)
T PLN02987        240 KEEEE-----GAEKKKDMLAALLASD--D-----GFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEE  307 (472)
T ss_pred             hhhhc-----cCcccccHHHHHHhcC--C-----CCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhChHHHHHHHHH
Confidence            32211     1123568999999753  1     5899999999999999999999999999999999999999999999


Q ss_pred             HHHHhcC---CCCCCcccCCCChhHHHHHHhhccCCCCCcCCCcccccccccccceecCCCCEEEeehhhhcCCCCCCCC
Q 036305          351 LAQAVGA---DRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDE  427 (515)
Q Consensus       351 i~~~~~~---~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~  427 (515)
                      ++++.+.   ++.++++++.+|||++||++|+||++|+++. +.|.+.+|++++||.||+|+.|.++.+.+|+||++|+|
T Consensus       308 ~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~-~~R~~~~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~~~~  386 (472)
T PLN02987        308 HEKIRAMKSDSYSLEWSDYKSMPFTQCVVNETLRVANIIGG-IFRRAMTDIEVKGYTIPKGWKVFASFRAVHLDHEYFKD  386 (472)
T ss_pred             HHHHHcccCCCCCCCHHHHhcChHHHHHHHHHHHccCCcCC-ccccCCCCeeECCEEECCCCEEEEehHHhhCCcccCCC
Confidence            9998752   3568899999999999999999999999986 67999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCccCCCcceeccCCCCCCCCCHHHHHHHHHHHHHHHHhhceeeeCCCccccccccccceeeccCCe
Q 036305          428 PWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDWELDCKEEIDMNDRMGITVRKAEPL  507 (515)
Q Consensus       428 p~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  507 (515)
                      |++||||||++.+.. ...+..++|||+|+|.|||++||.+|++++++.||++|+|++++...+..    ..+..|.+++
T Consensus       387 p~~F~PeRfl~~~~~-~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~----~~~~~p~~~~  461 (472)
T PLN02987        387 ARTFNPWRWQSNSGT-TVPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWVPAEQDKLVF----FPTTRTQKRY  461 (472)
T ss_pred             ccccCcccCCCCCCC-CCCCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEECCCCceee----cccccCCCCc
Confidence            999999999975322 12335799999999999999999999999999999999999874333222    4488898899


Q ss_pred             eeeeccCC
Q 036305          508 IAVPKRCK  515 (515)
Q Consensus       508 ~v~~~~r~  515 (515)
                      ++++++|+
T Consensus       462 ~~~~~~r~  469 (472)
T PLN02987        462 PINVKRRD  469 (472)
T ss_pred             eEEEEecc
Confidence            99999984


No 27 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=5.7e-69  Score=535.90  Aligned_cols=453  Identities=22%  Similarity=0.390  Sum_probs=342.7

Q ss_pred             CCCCCCCCCCCCC----------------eeeeccCCC-CCchHHHHHHHHHhCCeeEEecCCeeEEEecCHHHHHHHHH
Q 036305           44 RPKQHPPGPPGWP----------------IIGNMFDLG-TVPHRTLTELRQKYGDVIWLKFGAINTMVILSAKAATDFFK  106 (515)
Q Consensus        44 ~~~~~pPgp~~~p----------------~iG~~~~~~-~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~i~~  106 (515)
                      .++..+|||+.-.                .+||+..+. +..+..+.++++|||+||++++|+.++++|+||+.+++++.
T Consensus       112 ~~~~~~pgp~laa~t~~ye~y~~~~~~~~~~G~l~~i~~g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~  191 (633)
T PLN02738        112 LAKLGPPGELLAFLFTWVEAGEGYPKIPEAKGSISAVRGEAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILR  191 (633)
T ss_pred             hhhCCCCCchHHHHHcccccccccccCccccCcHHHhcCchHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHh
Confidence            3457889988311                234444443 45678899999999999999999988999999999999998


Q ss_pred             hcCcccCCCCCccceeeeecCCcccccCCCChHHHHHHHhHHhhhcchHHHHHcHHHHHHHHHHHHHHHHHhc---CCcc
Q 036305          107 NHDSTFAERKVTETMRVHGYDKSSLALAPYGAFWRVLRRLVTVEMLVTKRINETASVRRKCVNDMLLWIEQEA---SGVH  183 (515)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~l~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~---~~vd  183 (515)
                      ++...|.++.........  .+.++ ++.+|+.|+++|+.+. +.|+.+.+..+.+.+.+.++.+++++.+..   +.+|
T Consensus       192 ~~~~~f~k~~~~~~~~~~--~g~~l-~~~dge~wr~rRr~l~-p~Fs~~~v~~l~~~i~~~v~~L~~~L~~~~~~g~~vd  267 (633)
T PLN02738        192 DNSKAYSKGILAEILEFV--MGKGL-IPADGEIWRVRRRAIV-PALHQKYVAAMISLFGQASDRLCQKLDAAASDGEDVE  267 (633)
T ss_pred             hCcccCCCcchHHHHhhc--cCCce-ecCCcHHHHHHHHhcc-HhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEe
Confidence            776566655322111111  13344 4567999999999998 999999999999999999999999997642   2899


Q ss_pred             hHHHHHHHHHHHHHHHHhhhccccccCCchHHHHHHHHHHHHHhcCCCcccc----cccccccCchhHHHHHHHHHHHHH
Q 036305          184 VARLVFLSTFNLLGNLMLSRDLLDRESNDGAEFFQAMMGLMEWSGHANLADF----FPILRRLDPQGLRRKMERDVGKAL  259 (515)
Q Consensus       184 ~~~~~~~~~~~~i~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~P~l~~~~~~~~~~~~~~~~~~~~  259 (515)
                      +...+..+++|+|+.++||.+++...++  ..+.+.+..............+    +|.+..+ +. ..++..+..+.+.
T Consensus       268 l~~~~~~lt~DVI~~~~FG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l-~~-~~~~~~~~~~~l~  343 (633)
T PLN02738        268 MESLFSRLTLDIIGKAVFNYDFDSLSND--TGIVEAVYTVLREAEDRSVSPIPVWEIPIWKDI-SP-RQRKVAEALKLIN  343 (633)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCccccccc--hHHHHHHHHHHHHHHHHhhcchhhhhhhHHhhh-ch-HHHHHHHHHHHHH
Confidence            9999999999999999999998643322  1233333322221110001111    2222222 11 1234445555666


Q ss_pred             HHHHHHHHHHHHhhcccc---CCC-CccccccHHHHHHhcccCCCCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHH
Q 036305          260 EIASKFVKERLEQKDKNV---TGT-SDEKRKDFLDVMLDFEGNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALT  335 (515)
Q Consensus       260 ~~~~~~i~~~~~~~~~~~---~~~-~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~  335 (515)
                      +...++++.+.+...+..   ... ......|+++.|++..       ..++++++.++++.+++||+|||+++++|+++
T Consensus       344 ~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~dil~~Ll~~~-------~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~  416 (633)
T PLN02738        344 DTLDDLIAICKRMVEEEELQFHEEYMNERDPSILHFLLASG-------DDVSSKQLRDDLMTMLIAGHETSAAVLTWTFY  416 (633)
T ss_pred             HHHHHHHHHHHHHHhhhcccchhcccccccchHHHHHHHcC-------CCCCHHHHHHHHHHHHhcCCccHHHHHHHHHH
Confidence            666666654432111000   000 1123458999998752       15889999999999999999999999999999


Q ss_pred             HHhhCchHHHHHHHHHHHHhcCCCCCCcccCCCChhHHHHHHhhccCCCCCcCCCcccccccccccceecCCCCEEEeeh
Q 036305          336 ELLTNPESLNKAKAELAQAVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNA  415 (515)
Q Consensus       336 ~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~  415 (515)
                      +|++||++|+||++||++++++ ..++++++++||||+|||+|+|||||+++. +.|.+.+|.+++||.||+|+.|.++.
T Consensus       417 ~L~~~Pevq~kLreEl~~v~~~-~~~t~edL~kLPYL~AVIkEtLRL~p~~p~-~~R~a~~d~~i~gy~IPkGT~V~~s~  494 (633)
T PLN02738        417 LLSKEPSVVAKLQEEVDSVLGD-RFPTIEDMKKLKYTTRVINESLRLYPQPPV-LIRRSLENDMLGGYPIKRGEDIFISV  494 (633)
T ss_pred             HHHhCHHHHHHHHHHHHHhcCC-CCCCHHHHccCHHHHHHHHHHHhcCCCccc-cceeeccCceECCEEECCCCEEEecH
Confidence            9999999999999999999884 678999999999999999999999999998 56999999999999999999999999


Q ss_pred             hhhcCCCCCCCCCCCCCCCCCCCCCC--CccCCCcceeccCCCCCCCCCHHHHHHHHHHHHHHHHhhceeeeCCCccccc
Q 036305          416 WAIGRDPEVWDEPWSFKPERFLGSTV--DYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDWELDCKEEIDM  493 (515)
Q Consensus       416 ~~~~~d~~~~~~p~~F~p~R~l~~~~--~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~~~~~  493 (515)
                      |.+||||++||||++|+||||+....  +....+..++|||.|+|.|+|++||++|+++++|+|+++|+|++.++.+ +.
T Consensus       495 ~~ihrdp~ifpdP~~F~PERWl~~~~~~~~~~~~~~~vpFG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~~~-~~  573 (633)
T PLN02738        495 WNLHRSPKHWDDAEKFNPERWPLDGPNPNETNQNFSYLPFGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPGAP-PV  573 (633)
T ss_pred             HHHhCCccccCCccccCcccCCCCCCCccccCCCCceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCCCC-Cc
Confidence            99999999999999999999985321  1222446799999999999999999999999999999999999883222 22


Q ss_pred             cccccceeeccCCeeeeeccC
Q 036305          494 NDRMGITVRKAEPLIAVPKRC  514 (515)
Q Consensus       494 ~~~~~~~~~~~~~~~v~~~~r  514 (515)
                      ....+.+..+.++++|++++|
T Consensus       574 ~~~~~~~~~p~~~l~v~l~~R  594 (633)
T PLN02738        574 KMTTGATIHTTEGLKMTVTRR  594 (633)
T ss_pred             ccccceEEeeCCCcEEEEEEC
Confidence            223467788888999999987


No 28 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=9.4e-69  Score=532.21  Aligned_cols=439  Identities=23%  Similarity=0.315  Sum_probs=344.9

Q ss_pred             CCCCCCCCCCCCCCeeeeccCCC-----CCchHHHHHHHHHhCC--eeEEecCCeeEEEecCHHHHHHHHHhcCcccCCC
Q 036305           43 SRPKQHPPGPPGWPIIGNMFDLG-----TVPHRTLTELRQKYGD--VIWLKFGAINTMVILSAKAATDFFKNHDSTFAER  115 (515)
Q Consensus        43 ~~~~~~pPgp~~~p~iG~~~~~~-----~~~~~~~~~~~~kyG~--v~~i~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~  115 (515)
                      ..+.+.||||+++|++|+++++.     .++++++.+++++||+  +|++++++.+.++++||+.+++++.++ +.|.++
T Consensus        38 ~~~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~-~~f~~~  116 (490)
T PLN02302         38 EGQPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDD-DAFEPG  116 (490)
T ss_pred             cCCCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCC-CccccC
Confidence            34457899999999999987762     4789999999999997  799999999999999999999999875 444433


Q ss_pred             CCccceeeeecCCcccccCCCChHHHHHHHhHHhhhc-chHHHHHcHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHH
Q 036305          116 KVTETMRVHGYDKSSLALAPYGAFWRVLRRLVTVEML-VTKRINETASVRRKCVNDMLLWIEQEASGVHVARLVFLSTFN  194 (515)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~l~~~~~-~~~~l~~~~~~~~~~~~~l~~~l~~~~~~vd~~~~~~~~~~~  194 (515)
                      .......  .++.. .+...+|+.|+++|+.+. +.| +++.++.+.+.+.+.++++++.+...+ .+|+.+++..++++
T Consensus       117 ~~~~~~~--~~g~~-~~~~~~g~~w~~~R~~~~-~~f~~~~~l~~~~~~i~~~v~~~~~~~~~~~-~v~~~~~~~~~~~~  191 (490)
T PLN02302        117 WPESTVE--LIGRK-SFVGITGEEHKRLRRLTA-APVNGPEALSTYIPYIEENVKSCLEKWSKMG-EIEFLTELRKLTFK  191 (490)
T ss_pred             CchhHHH--Hhccc-cccccCcHHHHHHHHHHH-hccCCHHHHHHHHHHHHHHHHHHHHHhcCCC-CEehHHHHHHHHHH
Confidence            2111111  12233 334457999999999998 666 578899999999999999999886443 79999999999999


Q ss_pred             HHHHHHhhhccccccCCchHHHHHHHHHHHHHhcCCCcccccccccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 036305          195 LLGNLMLSRDLLDRESNDGAEFFQAMMGLMEWSGHANLADFFPILRRLDPQGLRRKMERDVGKALEIASKFVKERLEQKD  274 (515)
Q Consensus       195 ~i~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  274 (515)
                      ++++++||.++...    ..++.+.+.........  ....+|       ....++..++.+.+.+++.+.++++++...
T Consensus       192 vi~~~~~G~~~~~~----~~~~~~~~~~~~~~~~~--~~~~~p-------~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~  258 (490)
T PLN02302        192 IIMYIFLSSESELV----MEALEREYTTLNYGVRA--MAINLP-------GFAYHRALKARKKLVALFQSIVDERRNSRK  258 (490)
T ss_pred             HHHHHHcCCCChHH----HHHHHHHHHHHHHHhhh--CCcCCC-------chhhHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            99999999877321    12222222222111100  000112       112234455677888889888888873321


Q ss_pred             cccCCCCccccccHHHHHHhcccCCCCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHH
Q 036305          275 KNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQA  354 (515)
Q Consensus       275 ~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~  354 (515)
                      .+    ...+..|+++.+++..+++   +..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++++
T Consensus       259 ~~----~~~~~~d~l~~ll~~~~~~---~~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~v  331 (490)
T PLN02302        259 QN----ISPRKKDMLDLLLDAEDEN---GRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEI  331 (490)
T ss_pred             cc----CCCCcCCHHHHHHhhhccC---CCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence            11    1124579999999875432   3368999999999999999999999999999999999999999999999999


Q ss_pred             hcCC----CCCCcccCCCChhHHHHHHhhccCCCCCcCCCcccccccccccceecCCCCEEEeehhhhcCCCCCCCCCCC
Q 036305          355 VGAD----RTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPWS  430 (515)
Q Consensus       355 ~~~~----~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~  430 (515)
                      .+..    ..++++++++||||+|||+|++|++|+++. ..|.+.+|++++||.||+|+.|.++.+.+|+||++|+||++
T Consensus       332 ~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~-~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~  410 (490)
T PLN02302        332 AKKRPPGQKGLTLKDVRKMEYLSQVIDETLRLINISLT-VFREAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPNPKE  410 (490)
T ss_pred             HhcCCCCCCCCCHHHHhcChHHHHHHHHHHHhCCCccc-chhcccCCEeECCEEECCCCEEEeeHHHhcCCcccCCCccc
Confidence            8642    137899999999999999999999999998 56999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCccCCCcceeccCCCCCCCCCHHHHHHHHHHHHHHHHhhceeeeCCCccccccccccceeeccCCeeee
Q 036305          431 FKPERFLGSTVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDWELDCKEEIDMNDRMGITVRKAEPLIAV  510 (515)
Q Consensus       431 F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  510 (515)
                      |+||||++..    ..+..++|||+|+|.|+|++||.+|+++++++|+++|+|++.++. ....  ...+..|.+++.++
T Consensus       411 F~PeR~~~~~----~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~-~~~~--~~~~~~p~~~~~~~  483 (490)
T PLN02302        411 FDPSRWDNYT----PKAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNPG-CKVM--YLPHPRPKDNCLAR  483 (490)
T ss_pred             cChhhcCCCC----CCCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCCC-Ccce--eCCCCCCCCCceEE
Confidence            9999999643    234579999999999999999999999999999999999987432 1222  23347778899999


Q ss_pred             eccCC
Q 036305          511 PKRCK  515 (515)
Q Consensus       511 ~~~r~  515 (515)
                      +++|.
T Consensus       484 ~~~~~  488 (490)
T PLN02302        484 ITKVA  488 (490)
T ss_pred             EEecc
Confidence            98873


No 29 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=9.6e-68  Score=520.58  Aligned_cols=449  Identities=26%  Similarity=0.389  Sum_probs=351.5

Q ss_pred             CCCCCCCCCeeeeccCC-----CCCchHHHHHHHHHhCCeeEEecCCeeEEEecCHHHHHHHHHhcCcccCCCCCcccee
Q 036305           48 HPPGPPGWPIIGNMFDL-----GTVPHRTLTELRQKYGDVIWLKFGAINTMVILSAKAATDFFKNHDSTFAERKVTETMR  122 (515)
Q Consensus        48 ~pPgp~~~p~iG~~~~~-----~~~~~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~  122 (515)
                      .=.|..|||++|..+.+     ...++..+.+|+++||++|++++|+.+.++++||+++++++.+....|.++.......
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~~   92 (489)
T PLN02936         13 LWGDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEVSE   92 (489)
T ss_pred             cCCCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhhhH
Confidence            34588899999998776     3568899999999999999999999999999999999999987666776654322111


Q ss_pred             eeecCCcccccCCCChHHHHHHHhHHhhhcchHHHHHcHH-HHHHHHHHHHHHHHHhc---CCcchHHHHHHHHHHHHHH
Q 036305          123 VHGYDKSSLALAPYGAFWRVLRRLVTVEMLVTKRINETAS-VRRKCVNDMLLWIEQEA---SGVHVARLVFLSTFNLLGN  198 (515)
Q Consensus       123 ~~~~~~~~~~~~~~~~~w~~~R~~l~~~~~~~~~l~~~~~-~~~~~~~~l~~~l~~~~---~~vd~~~~~~~~~~~~i~~  198 (515)
                      .. + +.++ +..+|+.|+++||.+. +.|+...++.+.+ ++.++++.+++.+.+..   .++|+.+++..+++++++.
T Consensus        93 ~~-~-~~~i-~~~~g~~wk~~Rk~l~-~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vd~~~~~~~~~~dvi~~  168 (489)
T PLN02936         93 FL-F-GSGF-AIAEGELWTARRRAVV-PSLHRRYLSVMVDRVFCKCAERLVEKLEPVALSGEAVNMEAKFSQLTLDVIGL  168 (489)
T ss_pred             HH-h-cCcc-ccCCchHHHHHHHhhc-CccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHH
Confidence            11 1 3444 4456999999999998 8999888888754 78888999999987642   2899999999999999999


Q ss_pred             HHhhhccccccCCchHHHHHHHHHHHHHhcCCCccccccccc-----ccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036305          199 LMLSRDLLDRESNDGAEFFQAMMGLMEWSGHANLADFFPILR-----RLDPQGLRRKMERDVGKALEIASKFVKERLEQK  273 (515)
Q Consensus       199 ~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  273 (515)
                      ++||.++++...+  .++.+.+......... .....+|++.     ++  .+..++..++.+.+.+++.+.++++++..
T Consensus       169 ~~fG~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~l~~~--~p~~~~~~~~~~~i~~~~~~~i~~~~~~~  243 (489)
T PLN02936        169 SVFNYNFDSLTTD--SPVIQAVYTALKEAET-RSTDLLPYWKVDFLCKI--SPRQIKAEKAVTVIRETVEDLVDKCKEIV  243 (489)
T ss_pred             HHcCCCccccccC--cHHHHHHHHHHHHHHH-hhhccchHHhhHHHhcc--ChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999654322  2344444443332211 1122344321     11  11234566778888888888888776321


Q ss_pred             ccccC---CCC--ccccccHHHHHHhcccCCCCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHH
Q 036305          274 DKNVT---GTS--DEKRKDFLDVMLDFEGNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAK  348 (515)
Q Consensus       274 ~~~~~---~~~--~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~  348 (515)
                      .+...   ...  .....|+++.|++..+       .++.+++.++++.+++||+|||+++++|++++|++||++|++++
T Consensus       244 ~~~~~~~~~~~~~~~~~~d~l~~ll~~~~-------~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~  316 (489)
T PLN02936        244 EAEGEVIEGEEYVNDSDPSVLRFLLASRE-------EVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKAQ  316 (489)
T ss_pred             hhcccccccccccccCchHHHHHHHhccc-------cCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence            11000   000  1234679999986532       48899999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCCCcccCCCChhHHHHHHhhccCCCCCcCCCcccccccccccceecCCCCEEEeehhhhcCCCCCCCCC
Q 036305          349 AELAQAVGADRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEP  428 (515)
Q Consensus       349 ~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p  428 (515)
                      +|++++++. ..++++++++||||+|||+|+||++|+++...+|.+..|+.++||.||+|+.|+++.+.+|+||++|+||
T Consensus       317 ~Ei~~~~~~-~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP  395 (489)
T PLN02936        317 EELDRVLQG-RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEVWERA  395 (489)
T ss_pred             HHHHHHhcC-CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHhccCChhhCCCc
Confidence            999999885 4589999999999999999999999999987766667778889999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCC--ccCCCcceeccCCCCCCCCCHHHHHHHHHHHHHHHHhhceeeeCCCccccccccccceeeccCC
Q 036305          429 WSFKPERFLGSTVD--YKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDWELDCKEEIDMNDRMGITVRKAEP  506 (515)
Q Consensus       429 ~~F~p~R~l~~~~~--~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~  506 (515)
                      ++|+||||+.++..  ....+..++|||.|+|.|||++||++|+++++++|+++|++++++++++..  ..+++..++.+
T Consensus       396 ~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~~~~--~~~~~~~~~~~  473 (489)
T PLN02936        396 EEFVPERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQDIVM--TTGATIHTTNG  473 (489)
T ss_pred             cccCccccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCCccce--ecceEEeeCCC
Confidence            99999999964321  122345799999999999999999999999999999999999884343322  24567778889


Q ss_pred             eeeeeccCC
Q 036305          507 LIAVPKRCK  515 (515)
Q Consensus       507 ~~v~~~~r~  515 (515)
                      ++|++++|.
T Consensus       474 ~~v~~~~R~  482 (489)
T PLN02936        474 LYMTVSRRR  482 (489)
T ss_pred             eEEEEEeee
Confidence            999999883


No 30 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=2.5e-66  Score=509.35  Aligned_cols=436  Identities=20%  Similarity=0.253  Sum_probs=337.2

Q ss_pred             CCeeeeccCCCCCchHHHHHHHHHhC-CeeEEecCCeeEEEecCHHHHHHHHHhcCcccCCCCCcc-ceeeeecCCcccc
Q 036305           55 WPIIGNMFDLGTVPHRTLTELRQKYG-DVIWLKFGAINTMVILSAKAATDFFKNHDSTFAERKVTE-TMRVHGYDKSSLA  132 (515)
Q Consensus        55 ~p~iG~~~~~~~~~~~~~~~~~~kyG-~v~~i~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  132 (515)
                      .++.|++.....+..+.+..+.++++ ..++++..+.  ++++||+.+++++..+...|.+..... ..... . ++++ 
T Consensus        49 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~-~-g~gi-  123 (502)
T PLN02426         49 AYLTASWAKDFDNLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDL-L-GRGI-  123 (502)
T ss_pred             CCccHHHHHhcccHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHh-c-CCce-
Confidence            56888887755566777777888887 6788876654  899999999999987755665543221 11111 1 3444 


Q ss_pred             cCCCChHHHHHHHhHHhhhcchHHHHHcH--HHHHHHHHHHHHHHHHhc-----CCcchHHHHHHHHHHHHHHHHhhhcc
Q 036305          133 LAPYGAFWRVLRRLVTVEMLVTKRINETA--SVRRKCVNDMLLWIEQEA-----SGVHVARLVFLSTFNLLGNLMLSRDL  205 (515)
Q Consensus       133 ~~~~~~~w~~~R~~l~~~~~~~~~l~~~~--~~~~~~~~~l~~~l~~~~-----~~vd~~~~~~~~~~~~i~~~~fg~~~  205 (515)
                      ++.+|+.|+++||.+. +.|+...++.+.  +.+.+..+.+++.+.+..     +++|+.+++..+++|+++.++||.++
T Consensus       124 ~~~~g~~wk~~Rk~l~-~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~  202 (502)
T PLN02426        124 FNVDGDSWRFQRKMAS-LELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFGLDP  202 (502)
T ss_pred             eecCcHHHHHHHHHhH-hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHhCCCC
Confidence            5567999999999998 999999998864  677777777887776532     26999999999999999999999998


Q ss_pred             ccccCC-chHHHHHHHHHHHHHhcCCCccccccccc---ccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCC
Q 036305          206 LDRESN-DGAEFFQAMMGLMEWSGHANLADFFPILR---RLDPQGLRRKMERDVGKALEIASKFVKERLEQKDKNVTGTS  281 (515)
Q Consensus       206 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~P~l~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  281 (515)
                      ++.+.+ ...++.+.+..+....... ....+|++.   .+.+....++..++.+.+.+++.++|+++++..        
T Consensus       203 ~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~--------  273 (502)
T PLN02426        203 GCLELSLPISEFADAFDTASKLSAER-AMAASPLLWKIKRLLNIGSERKLKEAIKLVDELAAEVIRQRRKLG--------  273 (502)
T ss_pred             cccCCCCCccHHHHHHHHHHHHHHHH-HhcchhHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhcc--------
Confidence            655422 2345655555443222110 111223221   111222345667788899999999999887321        


Q ss_pred             ccccccHHHHHHhcccCCCCCCCCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCC-CC
Q 036305          282 DEKRKDFLDVMLDFEGNGKDEPAKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGAD-RT  360 (515)
Q Consensus       282 ~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~-~~  360 (515)
                      .....|+++.+++..         .+++++.+++.++++||+|||+++++|++++|++||++|+++++||+++.+.+ ..
T Consensus       274 ~~~~~dll~~ll~~~---------~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~  344 (502)
T PLN02426        274 FSASKDLLSRFMASI---------NDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPNQEA  344 (502)
T ss_pred             cCCcchHHHHHHhcC---------CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCC
Confidence            113568999999753         25689999999999999999999999999999999999999999999998753 36


Q ss_pred             CCcccCCCChhHHHHHHhhccCCCCCcCCCcccccccccc-cceecCCCCEEEeehhhhcCCCCCC-CCCCCCCCCCCCC
Q 036305          361 FEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNF-QGYHIPKDTQVLVNAWAIGRDPEVW-DEPWSFKPERFLG  438 (515)
Q Consensus       361 ~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i-~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~p~R~l~  438 (515)
                      ++++++++||||+|||+|+||++||++.. .|.+.+|.++ +|+.||+|+.|.++.+.+||||++| |||++|+||||++
T Consensus       345 ~t~~~l~~LpYl~avi~EtLRl~p~v~~~-~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~  423 (502)
T PLN02426        345 ASFEEMKEMHYLHAALYESMRLFPPVQFD-SKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLK  423 (502)
T ss_pred             CCHHHHhcChHHHHHHHHHHhCCCCCCCc-ceeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccccCC
Confidence            89999999999999999999999999984 5999999777 8999999999999999999999999 9999999999997


Q ss_pred             CCCCccCCCcceeccCCCCCCCCCHHHHHHHHHHHHHHHHhhceeeeCCCccccccccccceeeccCCeeeeeccCC
Q 036305          439 STVDYKGQNYELIPFGAGRRMCAGVPLAHRMLHLILGSLLHQFDWELDCKEEIDMNDRMGITVRKAEPLIAVPKRCK  515 (515)
Q Consensus       439 ~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  515 (515)
                      +......++..++|||+|+|.|+|++||++|++++++.|+++|+|+++++.+.......++++.++.+++|++++|.
T Consensus       424 ~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~gl~v~~~~r~  500 (502)
T PLN02426        424 NGVFVPENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSNRAPRFAPGLTATVRGGLPVRVRERV  500 (502)
T ss_pred             CCCcCCCCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCCCCCCcccceeEEecCCCEEEEEEEcc
Confidence            42111223457999999999999999999999999999999999998632221223335788999999999999873


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=2.3e-59  Score=452.47  Aligned_cols=397  Identities=20%  Similarity=0.261  Sum_probs=293.6

Q ss_pred             CCCCCCCCCCCCeeeeccCCC-----CCchHHHHHHHHHhCC-eeEEecCCeeE-------EEecCHHHHHHHHHh----
Q 036305           45 PKQHPPGPPGWPIIGNMFDLG-----TVPHRTLTELRQKYGD-VIWLKFGAINT-------MVILSAKAATDFFKN----  107 (515)
Q Consensus        45 ~~~~pPgp~~~p~iG~~~~~~-----~~~~~~~~~~~~kyG~-v~~i~~~~~~~-------v~v~dp~~~~~i~~~----  107 (515)
                      |.+.|||+.+||++|++++|.     .+|..++++.++|||+ ||+++++|.++       ++++||+.++.+|.+    
T Consensus        15 ~~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~~   94 (480)
T PLN02648         15 PLREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKVD   94 (480)
T ss_pred             CCCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhcc
Confidence            467799999999999998653     4568999999999998 99999988655       999999999999975    


Q ss_pred             cCcccCCCCCccceeeeecCCc--ccccCCCChHHHHHHHhHHhhhcchHHHHHcHHHHHHHHHHHHHHHHHh---cCCc
Q 036305          108 HDSTFAERKVTETMRVHGYDKS--SLALAPYGAFWRVLRRLVTVEMLVTKRINETASVRRKCVNDMLLWIEQE---ASGV  182 (515)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~w~~~R~~l~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~---~~~v  182 (515)
                      +...+..... ....  .+|++  ..+++.+|+.|+++|+++. +.|+ ..++.+.+.+.+.++++++.|...   ++++
T Consensus        95 ~~~~~~~~~~-~~~~--l~G~~~~~s~~~~~g~~H~r~Rrll~-~~f~-~~~~~~~~~m~~~~~~~~~~w~~~~~~~~~v  169 (480)
T PLN02648         95 KRDVFTGTYM-PSTA--FTGGYRVLSYLDPSEPKHAKLKSFLF-ELLK-SRHRRFIPEFRAAFAELFDTWEAELAKKGKA  169 (480)
T ss_pred             ccccceeeec-cCcc--ccCCceeeeecCCCCchHHHHHHHHH-HHHH-HhhhhhhhHHHHHHHHHHHHHHHHHhhCCCc
Confidence            3333333221 1122  23333  1556677999999999998 8998 477889999999999999999653   2279


Q ss_pred             chHHHHHHHHHHHHHHHHhhhccccccCCchHHHHHHHHHHHHHhcCCCcccccccccccCchhHHH-----------HH
Q 036305          183 HVARLVFLSTFNLLGNLMLSRDLLDRESNDGAEFFQAMMGLMEWSGHANLADFFPILRRLDPQGLRR-----------KM  251 (515)
Q Consensus       183 d~~~~~~~~~~~~i~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~-----------~~  251 (515)
                      |+.+.+..+++|++++++||.+.+. . .....+...........       .+|......+....+           ..
T Consensus       170 dv~~~~~~lt~~vi~~~lfG~~~~~-~-~l~~~~~~~~~~~~~~~-------~~p~~~~~l~~~~~~~i~~~~~~~~~~~  240 (480)
T PLN02648        170 EFNDPLDQMAFNFLCKALTGKDPSE-T-ALGSDGPALIQKWLALQ-------LAPLASTGLPHVLEELLLHTFPLPFFLV  240 (480)
T ss_pred             cccchHHHHHHHHHHHHHcCCCcch-h-hhccchhHHHHHHHHHH-------hhHHHHcCchHHHHHHhhcccCCchhhh
Confidence            9999999999999999999997743 1 11112222222221100       011111100000000           00


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccccCCCCccccccHHHHHHhcccCCCCCCCCCCHHHHHHHHHH-HHHhcccchHHHH
Q 036305          252 ERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVSEKDLNIFILE-IFLAGSETTSSTI  330 (515)
Q Consensus       252 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~-~~~ag~~tt~~~l  330 (515)
                      .+..+.+.+.++                       +.++.+++..++.     +++++++.++++. ..+++++|+++++
T Consensus       241 ~~~~~~~~~~~~-----------------------~~~~~ll~~~~~~-----~l~~~ei~~~~l~~~~~~t~~~~~~~l  292 (480)
T PLN02648        241 KSDYDKLYDFFR-----------------------ASATEALDLAEKF-----GISREEALHNLLFVLGFNAFGGFKIFF  292 (480)
T ss_pred             hccHHHHHHHHH-----------------------HHHHHHHHHHHhc-----CCCHHHHHHHHHHHHHHHhhHHHHHHH
Confidence            001111111111                       1122334333222     5999999999875 4466788888899


Q ss_pred             HHHHHHHhhCch-HHHHHHHHHHHHhcC-CCCCCcccCCCChhHHHHHHhhccCCCCCcCCCccccccccccc----cee
Q 036305          331 EWALTELLTNPE-SLNKAKAELAQAVGA-DRTFEEDDIDNLPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQ----GYH  404 (515)
Q Consensus       331 ~~~l~~L~~~p~-~~~~l~~Ei~~~~~~-~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~----g~~  404 (515)
                      +|++++|+.||+ +|+++++||+.+.+. ++.++++++.+||||++||+|+||++|++++ ..|++.+|++++    ||.
T Consensus       293 ~~~l~~L~~~p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~-~~r~a~~d~~l~~~~~g~~  371 (480)
T PLN02648        293 PALLKWVGRAGEELQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPF-QYGRAREDFVIESHDAAFE  371 (480)
T ss_pred             HHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCccc-ccceecCCEEEecCCceEE
Confidence            999999999995 999999999999863 4578999999999999999999999999998 558899999995    799


Q ss_pred             cCCCCEEEeehhhhcCCCCCCCCCCCCCCCCCCCCCCCccCCCcceecc---------CCCCCCCCCHHHHHHHHHHHHH
Q 036305          405 IPKDTQVLVNAWAIGRDPEVWDEPWSFKPERFLGSTVDYKGQNYELIPF---------GAGRRMCAGVPLAHRMLHLILG  475 (515)
Q Consensus       405 ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~F---------g~G~r~C~G~~~A~~~~~~~~~  475 (515)
                      ||+|+.|.++.+.+|+||++|+||++|||+||++++.+   ....+++|         |+|+|.|+|++||++|++++++
T Consensus       372 IpkG~~V~~~~~~~hrdp~~~~dP~~F~PeRf~~~~~~---~~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~la  448 (480)
T PLN02648        372 IKKGEMLFGYQPLVTRDPKVFDRPEEFVPDRFMGEEGE---KLLKYVFWSNGRETESPTVGNKQCAGKDFVVLVARLFVA  448 (480)
T ss_pred             ECCCCEEEEChHHHhCCcccCCCcceeCCCCCCCCCcc---ccccccccCCCcccCCCCCCCccCccHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999864321   11233444         6778999999999999999999


Q ss_pred             HHHhhce-eeeCC
Q 036305          476 SLLHQFD-WELDC  487 (515)
Q Consensus       476 ~ll~~f~-~~~~~  487 (515)
                      +|+++|+ |++.+
T Consensus       449 ~Ll~~f~~~~l~~  461 (480)
T PLN02648        449 ELFLRYDSFEIEV  461 (480)
T ss_pred             HHHHHhCEEeecC
Confidence            9999998 99873


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=3.2e-53  Score=405.35  Aligned_cols=383  Identities=26%  Similarity=0.384  Sum_probs=305.2

Q ss_pred             chHHHHHHHHHhCCeeEEecCCee--EEEecCHHHHHHHHHhcCcccCCCCCcccee--eeecCCcccccCCCChHHHHH
Q 036305           68 PHRTLTELRQKYGDVIWLKFGAIN--TMVILSAKAATDFFKNHDSTFAERKVTETMR--VHGYDKSSLALAPYGAFWRVL  143 (515)
Q Consensus        68 ~~~~~~~~~~kyG~v~~i~~~~~~--~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~w~~~  143 (515)
                      +......+.+.||.++++...+..  +++++++++++++++++. .+++........  .....+.+.++..+|+.|+++
T Consensus        24 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~r~  102 (411)
T COG2124          24 PRFFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTRL  102 (411)
T ss_pred             hhhhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhccccceeecCCHHHHHH
Confidence            455666778889999888876655  899999999999998863 222221111111  111113343566779999999


Q ss_pred             HHhHHhhhcchHHHHHcHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhhhccccccCCchHHHHHHHHHH
Q 036305          144 RRLVTVEMLVTKRINETASVRRKCVNDMLLWIEQEASGVHVARLVFLSTFNLLGNLMLSRDLLDRESNDGAEFFQAMMGL  223 (515)
Q Consensus       144 R~~l~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~vd~~~~~~~~~~~~i~~~~fg~~~~~~~~~~~~~~~~~~~~~  223 (515)
                      ||++. +.|+++.++.+.+.+.+.++++++.+ ...+..++.+++..+++++|+ .+||.+..+     ...+.......
T Consensus       103 Rkl~~-~~F~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~v~~~a~~l~~~vi~-~l~Gv~~~~-----~~~~~~~~~~~  174 (411)
T COG2124         103 RKLLA-PAFTPRALRGYRPLIREIADRLLDDL-WQGGADLVLDFAAELTLRVIA-ELLGVPLED-----RPQLLRWSDAL  174 (411)
T ss_pred             HHHhc-cccCHHHHHHHHHHHHHHHHHHHHhc-ccCCchhHHHHhhhhhHHHHH-HHhCCCHHH-----HHHHHHHHHHH
Confidence            99998 99999999999999999999999998 433478899999999999999 999998833     22333333332


Q ss_pred             HHHhcCCCcccccccccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCccccccHHHHHHhcccCCCCCC
Q 036305          224 MEWSGHANLADFFPILRRLDPQGLRRKMERDVGKALEIASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEP  303 (515)
Q Consensus       224 ~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~  303 (515)
                      ...        ..|...   +.....+..++...+.+++.++|++++ ..          ..+|+++.++.+.+++.   
T Consensus       175 ~~~--------~~~~~~---~~~~~~~~~~a~~~~~~~~~~li~~rR-~~----------~~~dlls~l~~a~~~~~---  229 (411)
T COG2124         175 LLR--------LDPDLG---PEEPWRRARAARRELDAYLRALIAERR-AA----------PRDDLLSLLLSAEDDGG---  229 (411)
T ss_pred             Hhc--------cCcccC---CcccHHHHHHHHHHHHHHHHHHHHHhc-cC----------CcccHHHHHHHHhhCCC---
Confidence            221        001111   122356677889999999999999887 22          67899999999887762   


Q ss_pred             CCCCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHHhcCCCCCCcccCCCChhHHHHHHhhccCC
Q 036305          304 AKVSEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAVGADRTFEEDDIDNLPYLKAVIKETLRLH  383 (515)
Q Consensus       304 ~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~  383 (515)
                      ..+|++|+.++++++++||+|||+++++|+++.|++||++++++++|.+.                ||+.++++|+||++
T Consensus       230 ~~lsd~Ei~~~~~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~----------------~~~~~~v~E~LR~~  293 (411)
T COG2124         230 GRLSDDEIRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR----------------PLLEAVVEETLRLY  293 (411)
T ss_pred             CcCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch----------------HHHHHHHHHHHHhC
Confidence            25999999999999999999999999999999999999999999999865                88999999999999


Q ss_pred             CCCcCCCcccccccccccceecCCCCEEEeehhhhcCCCCCCCCCCCCCCCCCCCCCCCccCCCcceeccCCCCCCCCCH
Q 036305          384 PPIPFLVPRRAMEDTNFQGYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPERFLGSTVDYKGQNYELIPFGAGRRMCAGV  463 (515)
Q Consensus       384 ~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~  463 (515)
                      ||++. +.|.+++|++++|+.||+|+.|.+..+.+||||++|++|++|||+||.          ..++|||+|+|.|+|.
T Consensus       294 ppv~~-~~R~~~~d~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~----------~~~l~FG~G~H~ClG~  362 (411)
T COG2124         294 PPVPL-ARRVATEDVELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN----------NAHLPFGGGPHRCLGA  362 (411)
T ss_pred             Cchhc-cceeccCCEeeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC----------CCCcCCCCCCccccCH
Confidence            99999 889999999999999999999999999999999999999999999995          3699999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhceeeeCCCccccccccccceeeccCCeeeeeccC
Q 036305          464 PLAHRMLHLILGSLLHQFDWELDCKEEIDMNDRMGITVRKAEPLIAVPKRC  514 (515)
Q Consensus       464 ~~A~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  514 (515)
                      +||.+|++++++.+|++|++..... .....  ...+..+..+..+.++.+
T Consensus       363 ~lA~~E~~~~l~~ll~r~~~~~~~~-~~~~~--~~~~~~~~g~~~l~v~~~  410 (411)
T COG2124         363 ALARLELKVALAELLRRFPLLLLAE-PPPLV--RRPTLVPRGGERLPVRRR  410 (411)
T ss_pred             HHHHHHHHHHHHHHHHhCchhhcCC-CCCcc--ccccccCCCcceeeeecC
Confidence            9999999999999999999987642 21122  344455555555555544


No 33 
>PF08492 SRP72:  SRP72 RNA-binding domain;  InterPro: IPR013699  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=66.09  E-value=3.8  Score=26.72  Aligned_cols=7  Identities=57%  Similarity=1.066  Sum_probs=5.6

Q ss_pred             CCCCCCC
Q 036305          432 KPERFLG  438 (515)
Q Consensus       432 ~p~R~l~  438 (515)
                      ||||||.
T Consensus        44 DPERWLP   50 (59)
T PF08492_consen   44 DPERWLP   50 (59)
T ss_pred             CccccCc
Confidence            7888885


No 34 
>PHA02681 ORF089 virion membrane protein; Provisional
Probab=58.93  E-value=59  Score=22.65  Aligned_cols=9  Identities=0%  Similarity=0.154  Sum_probs=4.3

Q ss_pred             hHHHHHHHH
Q 036305           69 HRTLTELRQ   77 (515)
Q Consensus        69 ~~~~~~~~~   77 (515)
                      .+.++.+|+
T Consensus        54 pDQVrAlHR   62 (92)
T PHA02681         54 DDQVRAFHA   62 (92)
T ss_pred             HHHHHHHHH
Confidence            344555554


No 35 
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=56.89  E-value=51  Score=32.07  Aligned_cols=47  Identities=15%  Similarity=0.220  Sum_probs=25.5

Q ss_pred             CchHHHHHHH-HHhCCeeEEecCCeeEEEecCHHHHHHHHHhcCcccC
Q 036305           67 VPHRTLTELR-QKYGDVIWLKFGAINTMVILSAKAATDFFKNHDSTFA  113 (515)
Q Consensus        67 ~~~~~~~~~~-~kyG~v~~i~~~~~~~v~v~dp~~~~~i~~~~~~~~~  113 (515)
                      .|.+.++-.. =+||.|++=.+-++.+-|=.=|..-++-|.+.+..|+
T Consensus       210 ~pl~l~eli~~Grfg~V~KaqL~~~~VAVKifp~~~kqs~~~Ek~Iy~  257 (534)
T KOG3653|consen  210 DPLQLLELIGRGRFGCVWKAQLDNRLVAVKIFPEQEKQSFQNEKNIYS  257 (534)
T ss_pred             CchhhHHHhhcCccceeehhhccCceeEEEecCHHHHHHHHhHHHHHh
Confidence            3444443333 3578888766666555544445555555555544443


No 36 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=50.88  E-value=45  Score=20.76  Aligned_cols=43  Identities=28%  Similarity=0.262  Sum_probs=34.8

Q ss_pred             HHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHH
Q 036305          309 KDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAEL  351 (515)
Q Consensus       309 ~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei  351 (515)
                      -++..++..++-.|.+..+-.+.--+...--||+....+..|+
T Consensus         5 ~d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~el   47 (48)
T PF12554_consen    5 LDVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKEL   47 (48)
T ss_pred             HHHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHh
Confidence            4567777888888888888888888888888999888888876


No 37 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=45.65  E-value=20  Score=27.90  Aligned_cols=23  Identities=13%  Similarity=0.384  Sum_probs=16.7

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHhh
Q 036305          458 RMCAGVPLAHRMLHLILGSLLHQ  480 (515)
Q Consensus       458 r~C~G~~~A~~~~~~~~~~ll~~  480 (515)
                      -.|.|+.||..++-.++.+++..
T Consensus        18 yN~~gKKFsE~QiN~FIs~lIts   40 (148)
T PF09201_consen   18 YNCLGKKFSETQINAFISHLITS   40 (148)
T ss_dssp             EETTS----HHHHHHHHHHHHHS
T ss_pred             ecccchHHHHHHHHHHHHHHhcC
Confidence            46999999999999999999864


No 38 
>PRK06789 flagellar motor switch protein; Validated
Probab=44.09  E-value=19  Score=24.90  Aligned_cols=39  Identities=10%  Similarity=0.160  Sum_probs=32.3

Q ss_pred             HHhhccCCCCCcCCCccccccccc--ccceecCCCCEEEee
Q 036305          376 IKETLRLHPPIPFLVPRRAMEDTN--FQGYHIPKDTQVLVN  414 (515)
Q Consensus       376 i~E~lRl~~~~~~~~~R~~~~~~~--i~g~~ip~G~~v~~~  414 (515)
                      ++|.+.+.+.....+-|.+.+++.  ++|..|.+|..|.++
T Consensus        22 i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~   62 (74)
T PRK06789         22 IEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKN   62 (74)
T ss_pred             HHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEEC
Confidence            889999998887777777777754  489999999998774


No 39 
>PF15330 SIT:  SHP2-interacting transmembrane adaptor protein, SIT
Probab=41.91  E-value=65  Score=24.29  Aligned_cols=12  Identities=25%  Similarity=0.097  Sum_probs=8.5

Q ss_pred             CCCeeeeccCCC
Q 036305           54 GWPIIGNMFDLG   65 (515)
Q Consensus        54 ~~p~iG~~~~~~   65 (515)
                      .-|+.||+....
T Consensus        45 ~~p~YgNL~~~q   56 (107)
T PF15330_consen   45 DDPCYGNLELQQ   56 (107)
T ss_pred             CCcccccccccc
Confidence            468999976543


No 40 
>PF01102 Glycophorin_A:  Glycophorin A;  InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=41.10  E-value=54  Score=25.34  Aligned_cols=7  Identities=14%  Similarity=0.221  Sum_probs=2.7

Q ss_pred             HHHHHHH
Q 036305           34 VLLLLRI   40 (515)
Q Consensus        34 ~~~~~~~   40 (515)
                      ++|+.++
T Consensus        84 i~y~irR   90 (122)
T PF01102_consen   84 ISYCIRR   90 (122)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            3333443


No 41 
>TIGR00847 ccoS cytochrome oxidase maturation protein, cbb3-type. CcoS from Rhodobacter capsulatus has been shown essential for incorporation of redox-active prosthetic groups (heme, Cu) into cytochrome cbb(3) oxidase. FixS of Bradyrhizobium japonicum appears to have the same function. Members of this family are found so far in organisms with a cbb3-type cytochrome oxidase, including Neisseria meningitidis, Helicobacter pylori, Campylobacter jejuni, Caulobacter crescentus, Bradyrhizobium japonicum, and Rhodobacter capsulatus.
Probab=40.05  E-value=97  Score=19.64  Aligned_cols=20  Identities=15%  Similarity=0.260  Sum_probs=7.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHH
Q 036305           20 GLLVCIIIFSASGAVLLLLR   39 (515)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~~~   39 (515)
                      .+++.+.+++.+.+++.++|
T Consensus         5 ~~LIpiSl~l~~~~l~~f~W   24 (51)
T TIGR00847         5 TILIPISLLLGGVGLVAFLW   24 (51)
T ss_pred             HHHHHHHHHHHHHHHHHHHH
Confidence            33333333333333333333


No 42 
>PF15050 SCIMP:  SCIMP protein
Probab=40.00  E-value=99  Score=23.48  Aligned_cols=17  Identities=47%  Similarity=0.768  Sum_probs=12.0

Q ss_pred             CCCCCCCCC-CCCeeeec
Q 036305           45 PKQHPPGPP-GWPIIGNM   61 (515)
Q Consensus        45 ~~~~pPgp~-~~p~iG~~   61 (515)
                      +.+.||.|+ +.++.|+.
T Consensus        66 ~~~LPpLPPRg~~s~~~~   83 (133)
T PF15050_consen   66 PVQLPPLPPRGSPSPEDS   83 (133)
T ss_pred             cCCCCCCCCCCCCCcccc
Confidence            356788776 57888875


No 43 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=39.80  E-value=28  Score=22.53  Aligned_cols=24  Identities=38%  Similarity=0.504  Sum_probs=19.4

Q ss_pred             HHHHHhhCchHHHHHHHHHHHHhc
Q 036305          333 ALTELLTNPESLNKAKAELAQAVG  356 (515)
Q Consensus       333 ~l~~L~~~p~~~~~l~~Ei~~~~~  356 (515)
                      ++.+|..||++.+++.+.=.+.+|
T Consensus         5 iV~YLv~nPevl~kl~~g~asLIG   28 (57)
T PF05952_consen    5 IVNYLVQNPEVLEKLKEGEASLIG   28 (57)
T ss_pred             HHHHHHHChHHHHHHHcCCeeEec
Confidence            567899999999999887665554


No 44 
>COG0851 MinE Septum formation topological specificity factor [Cell division and chromosome partitioning]
Probab=36.70  E-value=68  Score=22.92  Aligned_cols=42  Identities=17%  Similarity=0.419  Sum_probs=25.6

Q ss_pred             HHHHHhcccchHHHHHHHHHHHhh-------CchHHHHHHHHHHHHhcC
Q 036305          316 LEIFLAGSETTSSTIEWALTELLT-------NPESLNKAKAELAQAVGA  357 (515)
Q Consensus       316 ~~~~~ag~~tt~~~l~~~l~~L~~-------~p~~~~~l~~Ei~~~~~~  357 (515)
                      +.+++.=..||+++.--=|..++.       .|++.+.+|+||-+++..
T Consensus         4 ~dff~~r~~~Sa~~AkeRLQiilA~eR~~~~~pd~l~~Lr~eIl~VI~K   52 (88)
T COG0851           4 FDFFFSRKKNSAETAKERLQLILAHERAAGLQPDYLEQLRKEILEVISK   52 (88)
T ss_pred             HHHHHhcCCCcHHHHHHHHHHhhhhhhhcCCCcchHHHHHHHHHHHHHH
Confidence            334443232555554443433332       389999999999999875


No 45 
>PHA03049 IMV membrane protein; Provisional
Probab=33.28  E-value=1.3e+02  Score=20.03  Aligned_cols=20  Identities=20%  Similarity=0.466  Sum_probs=7.9

Q ss_pred             hcCCCCCCCCCCCCCCeeee
Q 036305           41 KSSRPKQHPPGPPGWPIIGN   60 (515)
Q Consensus        41 ~~~~~~~~pPgp~~~p~iG~   60 (515)
                      ++......||-|--.+-.-+
T Consensus        25 kk~~~q~~~p~~e~ye~~e~   44 (68)
T PHA03049         25 KKTTTSQNPPSQEKYEKMED   44 (68)
T ss_pred             cccccCCCCCChhhccCchh
Confidence            33444344444333333333


No 46 
>PHA01327 hypothetical protein
Probab=28.88  E-value=35  Score=20.01  Aligned_cols=21  Identities=14%  Similarity=0.271  Sum_probs=16.8

Q ss_pred             CcccccCCCChHHHHHHHhHH
Q 036305          128 KSSLALAPYGAFWRVLRRLVT  148 (515)
Q Consensus       128 ~~~~~~~~~~~~w~~~R~~l~  148 (515)
                      ..+.+.+.+|+.|++.|..+.
T Consensus        10 kr~~vinehge~wqer~drmk   30 (49)
T PHA01327         10 KRNNVINEHGEEWQERKDRMK   30 (49)
T ss_pred             ccchHHHhhHHHHHHHHHHHH
Confidence            456667778999999988776


No 47 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=27.86  E-value=28  Score=22.10  Aligned_cols=11  Identities=45%  Similarity=0.939  Sum_probs=9.3

Q ss_pred             eccCCCCCCCC
Q 036305          451 IPFGAGRRMCA  461 (515)
Q Consensus       451 ~~Fg~G~r~C~  461 (515)
                      .+||-|.|.|-
T Consensus        12 ~kfg~GsrsC~   22 (56)
T KOG3506|consen   12 RKFGQGSRSCR   22 (56)
T ss_pred             cccCCCCccee
Confidence            47999999984


No 48 
>PF14129 DUF4296:  Domain of unknown function (DUF4296)
Probab=27.71  E-value=2.3e+02  Score=20.26  Aligned_cols=49  Identities=16%  Similarity=0.181  Sum_probs=41.3

Q ss_pred             CHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHHh
Q 036305          307 SEKDLNIFILEIFLAGSETTSSTIEWALTELLTNPESLNKAKAELAQAV  355 (515)
Q Consensus       307 ~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~  355 (515)
                      +...........++-=++.++....-.+.+.++||+..+++.+.+..-+
T Consensus        30 ~~~~~~~~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL   78 (87)
T PF14129_consen   30 SSDDNMIAYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERL   78 (87)
T ss_pred             cHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence            4456666777788889999999999999999999999999998887654


No 49 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=26.62  E-value=1.1e+02  Score=30.48  Aligned_cols=28  Identities=21%  Similarity=0.141  Sum_probs=19.7

Q ss_pred             HHHHHHHHHHHHhcCCCCCCCCCCCCCC
Q 036305           29 SASGAVLLLLRIKSSRPKQHPPGPPGWP   56 (515)
Q Consensus        29 ~~~~~~~~~~~~~~~~~~~~pPgp~~~p   56 (515)
                      +++++++.+......++.+..|+|++.+
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~Ppgp~   41 (463)
T PLN02196         14 ALFLCLLRFLAGFRRSSSTKLPLPPGTM   41 (463)
T ss_pred             HHHHHHHHHHHHhccCCCCCCCCCCCCC
Confidence            3344455566666778899999998765


No 50 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=26.54  E-value=43  Score=28.56  Aligned_cols=43  Identities=26%  Similarity=0.260  Sum_probs=32.6

Q ss_pred             ChhHHHHHHhhccCCCCCcCCCcccccccccccceecCCCCEEEe
Q 036305          369 LPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLV  413 (515)
Q Consensus       369 lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~  413 (515)
                      -..+.|||.|+.-........  =+..+|+.++|..||+|+.|.-
T Consensus        52 ~n~I~A~V~~~qtv~~Gs~vr--lRLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   52 KNTIRAVVDGTQTVVDGSRVR--LRLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCeEEEEEecceEEeCCCEEE--EEEcCceEECCEEeCCCCEEEE
Confidence            445778999998776554331  2467889999999999999865


No 51 
>PRK02302 hypothetical protein; Provisional
Probab=26.53  E-value=1.6e+02  Score=21.31  Aligned_cols=32  Identities=13%  Similarity=0.294  Sum_probs=27.2

Q ss_pred             HHHhCCeeEEecCCeeEEEecCHHHHHHHHHh
Q 036305           76 RQKYGDVIWLKFGAINTMVILSAKAATDFFKN  107 (515)
Q Consensus        76 ~~kyG~v~~i~~~~~~~v~v~dp~~~~~i~~~  107 (515)
                      -++||+|.-+.--...+++..|-+.+.++..+
T Consensus        23 LrkfG~I~Y~Skk~kYvvlYvn~~~~e~~~~k   54 (89)
T PRK02302         23 LSKYGDIVYHSKRSRYLVLYVNKEDVEQKLEE   54 (89)
T ss_pred             HhhcCcEEEEeccccEEEEEECHHHHHHHHHH
Confidence            37899999887777788888999999999876


No 52 
>COG1759 5-formaminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl    5'-monophosphate synthetase (purine biosynthesis) [Nucleotide transport and    metabolism]
Probab=25.47  E-value=1.2e+02  Score=27.94  Aligned_cols=69  Identities=25%  Similarity=0.405  Sum_probs=41.2

Q ss_pred             HHHHhhccCCCCC---cCCCccccccccccc----ceecCCCCEEEeehhhhcCCCCCCCCCCCCCCCCCCCCCCCccCC
Q 036305          374 AVIKETLRLHPPI---PFLVPRRAMEDTNFQ----GYHIPKDTQVLVNAWAIGRDPEVWDEPWSFKPERFLGSTVDYKGQ  446 (515)
Q Consensus       374 a~i~E~lRl~~~~---~~~~~R~~~~~~~i~----g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~l~~~~~~~~~  446 (515)
                      .+++.+..+.||.   |+++.-.++.|..+=    .-+|..||.|.++                              ++
T Consensus       277 r~V~a~kel~~PG~iGpFcLq~~~t~dl~~vVfevS~Ri~gGTNv~~~------------------------------Gs  326 (361)
T COG1759         277 RFVEATKELVPPGIIGPFCLQTIVTDDLEFVVFEVSARIVGGTNVYMG------------------------------GS  326 (361)
T ss_pred             HHHHHHHHhcCCCcccceeeeeeecCCccEEEEEEeccccCCcccccC------------------------------CC
Confidence            4567777777754   445544555554331    2356677655432                              23


Q ss_pred             CcceeccCCCCCCCCCHHHHHHHHHHHHH
Q 036305          447 NYELIPFGAGRRMCAGVPLAHRMLHLILG  475 (515)
Q Consensus       447 ~~~~~~Fg~G~r~C~G~~~A~~~~~~~~~  475 (515)
                      +.+++-||.+  +-.||++|. |||.++-
T Consensus       327 pYs~l~~~~p--ms~GrRIA~-EIk~A~e  352 (361)
T COG1759         327 PYSNLYWGEP--MSTGRRIAR-EIKEAIE  352 (361)
T ss_pred             cchhhhcCCC--cchhhHHHH-HHHHHHH
Confidence            4455555543  678999998 8887753


No 53 
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=25.20  E-value=13  Score=35.45  Aligned_cols=44  Identities=20%  Similarity=0.166  Sum_probs=33.3

Q ss_pred             ChhHHHHHHhhccCCCCCcCCCcccccccccccceecCCCCEEEee
Q 036305          369 LPYLKAVIKETLRLHPPIPFLVPRRAMEDTNFQGYHIPKDTQVLVN  414 (515)
Q Consensus       369 lp~l~a~i~E~lRl~~~~~~~~~R~~~~~~~i~g~~ip~G~~v~~~  414 (515)
                      -..+.|||.|+.-+.-...+.  =+..+|+.++|..||+|+.|...
T Consensus       255 ~n~I~A~V~~~qtv~~G~~vr--lRLle~~~v~~~~ipkgt~l~g~  298 (410)
T TIGR03779       255 RNTIRACVHETQTVVDGSAVK--LRLLEPIQAGDLVIPKGTVLYGT  298 (410)
T ss_pred             CCceEEEEcCceEEecCCEEE--EEEcCceeeCCEEecCCCEEEEE
Confidence            455889999998877544331  24678999999999999998654


No 54 
>PF12444 Sox_N:  Sox developmental protein N terminal ;  InterPro: IPR022151  This domain family is found in eukaryotes, and is typically between 69 and 88 amino acids in length. The family is found in association with PF00505 from PFAM. There are two conserved sequence motifs: YDW and PVR. This family contains Sox8, Sox9 and Sox10 proteins which have structural similarity. Sox proteins are involved in developmental processes. 
Probab=24.59  E-value=54  Score=23.34  Aligned_cols=20  Identities=20%  Similarity=0.424  Sum_probs=17.4

Q ss_pred             HHHHHHHHHHHhhceeeeCC
Q 036305          468 RMLHLILGSLLHQFDWELDC  487 (515)
Q Consensus       468 ~~~~~~~~~ll~~f~~~~~~  487 (515)
                      .-|+-++..+|+-|||.++.
T Consensus        60 ~~IrdAVsqVLkGYDWtLVP   79 (84)
T PF12444_consen   60 VCIRDAVSQVLKGYDWTLVP   79 (84)
T ss_pred             HHHHHHHHHHhccCCceeee
Confidence            45889999999999999873


No 55 
>PF11227 DUF3025:  Protein of unknown function (DUF3025);  InterPro: IPR021390  Some members in this bacterial family of proteins are annotated as transmembrane proteins however this cannot be confirmed. Currently this family of proteins has no known function. 
Probab=23.77  E-value=42  Score=28.72  Aligned_cols=24  Identities=29%  Similarity=0.641  Sum_probs=19.4

Q ss_pred             Eeehhhh-cCCCCCCCCCCCCCCCC
Q 036305          412 LVNAWAI-GRDPEVWDEPWSFKPER  435 (515)
Q Consensus       412 ~~~~~~~-~~d~~~~~~p~~F~p~R  435 (515)
                      .++.|.- +.|+.+|.|...|+|-|
T Consensus       187 GiPGW~~~n~~~~FY~d~~~FRp~R  211 (212)
T PF11227_consen  187 GIPGWWPDNEDPAFYDDTDVFRPGR  211 (212)
T ss_pred             CCCCCCCCCCCcccccCccccCCCC
Confidence            3444454 88999999999999988


No 56 
>PRK02886 hypothetical protein; Provisional
Probab=23.71  E-value=2e+02  Score=20.73  Aligned_cols=32  Identities=13%  Similarity=0.273  Sum_probs=27.1

Q ss_pred             HHHhCCeeEEecCCeeEEEecCHHHHHHHHHh
Q 036305           76 RQKYGDVIWLKFGAINTMVILSAKAATDFFKN  107 (515)
Q Consensus        76 ~~kyG~v~~i~~~~~~~v~v~dp~~~~~i~~~  107 (515)
                      -++||+|.-+.--...+++-.|-+.+.++..+
T Consensus        21 LrkyG~I~Y~Skr~kYvvlYvn~~~~e~~~~k   52 (87)
T PRK02886         21 LRKFGNVHYVSKRLKYAVLYCDMEQVEDIMNK   52 (87)
T ss_pred             HhhcCcEEEEeccccEEEEEECHHHHHHHHHH
Confidence            37899999887777788888999999999876


No 57 
>PLN03134 glycine-rich RNA-binding protein 4; Provisional
Probab=23.18  E-value=3.1e+02  Score=22.00  Aligned_cols=49  Identities=20%  Similarity=0.165  Sum_probs=35.3

Q ss_pred             eeeeccCCCCCchHHHHHHHHHhCCeeEEecC---------CeeEEEecCHHHHHHHHHh
Q 036305           57 IIGNMFDLGTVPHRTLTELRQKYGDVIWLKFG---------AINTMVILSAKAATDFFKN  107 (515)
Q Consensus        57 ~iG~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---------~~~~v~v~dp~~~~~i~~~  107 (515)
                      ++|++..-  -..+.++++.++||+|..+.+.         +.-+|-..+++.++..+..
T Consensus        38 fVgnL~~~--~te~~L~~~F~~~G~I~~v~i~~d~~tg~~kGfaFV~F~~~e~A~~Al~~   95 (144)
T PLN03134         38 FIGGLSWG--TDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE   95 (144)
T ss_pred             EEeCCCCC--CCHHHHHHHHhcCCCeEEEEEEecCCCCCcceEEEEEECCHHHHHHHHHH
Confidence            44554322  3467788889999998877652         4467778899999999865


No 58 
>PF09926 DUF2158:  Uncharacterized small protein (DUF2158);  InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function. 
Probab=22.58  E-value=84  Score=20.12  Aligned_cols=18  Identities=39%  Similarity=0.416  Sum_probs=15.3

Q ss_pred             hCCeeEEecCCeeEEEec
Q 036305           79 YGDVIWLKFGAINTMVIL   96 (515)
Q Consensus        79 yG~v~~i~~~~~~~v~v~   96 (515)
                      -|++++++-||+.++|..
T Consensus         3 ~GDvV~LKSGGp~MTV~~   20 (53)
T PF09926_consen    3 IGDVVQLKSGGPRMTVTE   20 (53)
T ss_pred             CCCEEEEccCCCCeEEEE
Confidence            389999999999988773


No 59 
>PF13625 Helicase_C_3:  Helicase conserved C-terminal domain
Probab=22.33  E-value=2.3e+02  Score=22.05  Aligned_cols=38  Identities=8%  Similarity=0.264  Sum_probs=29.3

Q ss_pred             hHHHHHHHHHhCCeeEEecCCeeEEEecCHHHHHHHHHhc
Q 036305           69 HRTLTELRQKYGDVIWLKFGAINTMVILSAKAATDFFKNH  108 (515)
Q Consensus        69 ~~~~~~~~~kyG~v~~i~~~~~~~v~v~dp~~~~~i~~~~  108 (515)
                      ...+++|.++||.+--  -.+...+...|++.++++...+
T Consensus        77 ~~~i~~w~~~~g~v~l--~~~~~~l~~~d~~~l~~l~~~~  114 (129)
T PF13625_consen   77 EQSIEDWARRYGRVRL--YKGAYLLECDDPELLDELLADP  114 (129)
T ss_pred             HHHHHHHHHhcCCEEE--ecCeEEEEECCHHHHHHHHhCh
Confidence            4578999999998743  2246677888999999998764


No 60 
>PF14483 Cut8_M:  Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=22.18  E-value=1.5e+02  Score=17.41  Aligned_cols=12  Identities=17%  Similarity=0.304  Sum_probs=9.4

Q ss_pred             hhCchHHHHHHH
Q 036305          338 LTNPESLNKAKA  349 (515)
Q Consensus       338 ~~~p~~~~~l~~  349 (515)
                      -+||++++.++.
T Consensus        24 ~~HPei~~~i~~   35 (38)
T PF14483_consen   24 ERHPEIQQEIRS   35 (38)
T ss_dssp             HHSTHHHHHHHT
T ss_pred             HhChhHHHHHHh
Confidence            479998888764


No 61 
>PF09902 DUF2129:  Uncharacterized protein conserved in bacteria (DUF2129);  InterPro: IPR016979 This is a group of uncharacterised conserved proteins.
Probab=21.67  E-value=2.3e+02  Score=19.50  Aligned_cols=31  Identities=10%  Similarity=0.350  Sum_probs=26.3

Q ss_pred             HHhCCeeEEecCCeeEEEecCHHHHHHHHHh
Q 036305           77 QKYGDVIWLKFGAINTMVILSAKAATDFFKN  107 (515)
Q Consensus        77 ~kyG~v~~i~~~~~~~v~v~dp~~~~~i~~~  107 (515)
                      ++||+|.-+.--....++..|-+.+.++..+
T Consensus        18 ~kfG~i~Y~Skk~kYvvlYvn~~~~e~~~~k   48 (71)
T PF09902_consen   18 RKFGDIHYVSKKMKYVVLYVNEEDVEEIIEK   48 (71)
T ss_pred             hhcccEEEEECCccEEEEEECHHHHHHHHHH
Confidence            6899999887666788888899999998876


No 62 
>PRK14740 kdbF potassium-transporting ATPase subunit F; Provisional
Probab=21.33  E-value=1.5e+02  Score=15.98  Aligned_cols=14  Identities=21%  Similarity=0.145  Sum_probs=6.4

Q ss_pred             chhHHHHHHHHHHH
Q 036305           16 MDWLGLLVCIIIFS   29 (515)
Q Consensus        16 ~~~~~~~~~~~~~~   29 (515)
                      |+++.++.+.+.+.
T Consensus         1 M~~~~wls~a~a~~   14 (29)
T PRK14740          1 MTVLDWLSLALATG   14 (29)
T ss_pred             CcHHHHHHHHHHHH
Confidence            34555544444433


No 63 
>PF13993 YccJ:  YccJ-like protein
Probab=20.97  E-value=1.3e+02  Score=19.66  Aligned_cols=31  Identities=35%  Similarity=0.224  Sum_probs=23.7

Q ss_pred             HhcccchHHHHHHHHHHHhhCch-HHHHHHHH
Q 036305          320 LAGSETTSSTIEWALTELLTNPE-SLNKAKAE  350 (515)
Q Consensus       320 ~ag~~tt~~~l~~~l~~L~~~p~-~~~~l~~E  350 (515)
                      +|..-.|+.-++-+++.|+++.+ +.+++.+|
T Consensus         8 WA~~ReTS~EIAeAIFElA~~dE~lAekIWee   39 (69)
T PF13993_consen    8 WANVRETSIEIAEAIFELANNDEVLAEKIWEE   39 (69)
T ss_pred             HHHHhcCCHHHHHHHHHHhcccHHHHHHHHHc
Confidence            46667788888999999999877 44666665


No 64 
>PF05781 MRVI1:  MRVI1 protein;  InterPro: IPR008677 This family consists of mammalian MRVI1 proteins which are related to the lymphoid-restricted membrane protein (JAW1) and the IP3 receptor associated cGMP kinase substrates A and B (IRAGA and IRAGB). The function of MRVI1 is unknown although mutations in the Mrvi1 gene induces myeloid leukaemia by altering the expression of a gene important for myeloid cell growth and/or differentiation so it has been speculated that Mrvi1 is a tumour suppressor gene []. IRAG is very similar in sequence to MRVI1 and is an essential NO/cGKI-dependent regulator of IP3-induced calcium release. Activation of cGKI decreases IP3-stimulated elevations in intracellular calcium, induces smooth muscle relaxation and contributes to the antiproliferative and pro-apoptotic effects of NO/cGMP []. Jaw1 is a member of a class of proteins with COOH-terminal hydrophobic membrane anchors and is structurally similar to proteins involved in vesicle targeting and fusion. This suggests that the function and/or the structure of the ER in lymphocytes may be modified by lymphoid-restricted resident ER proteins [].
Probab=20.96  E-value=1.4e+02  Score=29.72  Aligned_cols=19  Identities=21%  Similarity=0.183  Sum_probs=10.3

Q ss_pred             HHHHHhcCCCCCCCCCCCC
Q 036305           36 LLLRIKSSRPKQHPPGPPG   54 (515)
Q Consensus        36 ~~~~~~~~~~~~~pPgp~~   54 (515)
                      ++.....+++....|++.|
T Consensus       496 fLtg~~fq~~vdaAp~~~G  514 (538)
T PF05781_consen  496 FLTGLFFQRCVDAAPVGTG  514 (538)
T ss_pred             HHhcccccchhccCCCCCC
Confidence            3444344555566677665


No 65 
>PRK13991 cell division topological specificity factor MinE; Provisional
Probab=20.21  E-value=2.2e+02  Score=20.54  Aligned_cols=18  Identities=33%  Similarity=0.606  Sum_probs=15.7

Q ss_pred             CchHHHHHHHHHHHHhcC
Q 036305          340 NPESLNKAKAELAQAVGA  357 (515)
Q Consensus       340 ~p~~~~~l~~Ei~~~~~~  357 (515)
                      .|++.+.+++||-+++..
T Consensus        35 ~p~~l~~lk~eil~VIsK   52 (87)
T PRK13991         35 TPEMMEQMKADLAEVIKR   52 (87)
T ss_pred             CHHHHHHHHHHHHHHHHH
Confidence            589999999999998765


No 66 
>PRK00400 hisE phosphoribosyl-ATP pyrophosphatase; Validated
Probab=20.13  E-value=3.9e+02  Score=20.13  Aligned_cols=79  Identities=19%  Similarity=0.153  Sum_probs=41.6

Q ss_pred             HHHHHHHHHHHHhhccccCCCCccccccHHHHHHhcccCCCCCCCCCCHHHHHHHHHHHHHhccc--------chHHHHH
Q 036305          260 EIASKFVKERLEQKDKNVTGTSDEKRKDFLDVMLDFEGNGKDEPAKVSEKDLNIFILEIFLAGSE--------TTSSTIE  331 (515)
Q Consensus       260 ~~~~~~i~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~--------tt~~~l~  331 (515)
                      .-+.+.|.+|+ +         ..+..++...|++...+       .-..-+..+...++.|...        -++-++.
T Consensus         6 ~~L~~~I~~Rk-~---------~~~~~SYT~~L~~~G~~-------ki~kKlgEEa~E~i~A~~~~d~~~~i~E~ADLlY   68 (105)
T PRK00400          6 ERLAATIEERK-G---------ADPEGSYTAKLLDKGLD-------KILKKVGEEATEVVIAAKDGDREELVYEIADLLY   68 (105)
T ss_pred             HHHHHHHHHHH-h---------CCCCCcHHHHHHHCCHH-------HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence            33455666666 2         22557788888873210       0112334444444444322        1344555


Q ss_pred             HHHHHHhhCchHHHHHHHHHHHHh
Q 036305          332 WALTELLTNPESLNKAKAELAQAV  355 (515)
Q Consensus       332 ~~l~~L~~~p~~~~~l~~Ei~~~~  355 (515)
                      +++..|..+-=-.+.+.+|+..=.
T Consensus        69 HllVlL~~~gv~~~dV~~eL~~R~   92 (105)
T PRK00400         69 HLLVLLAARGISLEDVLAELERRE   92 (105)
T ss_pred             HHHHHHHHcCCCHHHHHHHHHHHc
Confidence            777777776556666777766543


Done!