Query 036311
Match_columns 632
No_of_seqs 191 out of 294
Neff 4.2
Searched_HMMs 13730
Date Mon Mar 25 19:38:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036311.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/036311hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2vqca1 a.4.5.78 (A:4-73) F-11 32.7 13 0.00094 28.4 2.7 34 458-493 22-56 (70)
2 d1miwa1 a.173.1.1 (A:140-404) 11.5 67 0.0048 28.0 3.2 45 460-511 213-257 (265)
3 d2jdqd1 d.361.1.1 (D:688-756) 9.7 93 0.0068 23.6 2.9 24 606-630 25-48 (69)
4 d1rqpa2 c.132.1.1 (A:8-192) 5' 9.3 76 0.0055 28.5 2.7 38 586-631 32-69 (185)
5 d1piwa1 b.35.1.2 (A:1-152,A:32 8.8 45 0.0033 29.2 0.9 15 585-599 40-54 (192)
6 d1e3ja1 b.35.1.2 (A:4-142,A:31 7.2 90 0.0065 26.3 2.1 38 558-598 5-45 (178)
7 d1kg1a_ g.70.1.1 (A:) Necrosis 6.3 75 0.0055 23.2 0.9 9 271-279 42-50 (60)
8 d1sbza_ c.34.1.1 (A:) Probable 5.5 1.4E+02 0.011 25.7 2.5 23 488-511 146-168 (186)
9 d1e3ia1 b.35.1.2 (A:1-167,A:34 5.2 1.2E+02 0.0084 26.1 1.7 32 569-601 22-56 (202)
10 d1f60a2 b.44.1.1 (A:335-441) E 5.1 3.5E+02 0.026 21.5 4.6 21 599-626 54-74 (107)
No 1
>d2vqca1 a.4.5.78 (A:4-73) F-112 {Sulfolobus virus-like particle SSV1 [TaxId: 244589]}
Probab=32.73 E-value=13 Score=28.42 Aligned_cols=34 Identities=29% Similarity=0.432 Sum_probs=26.7
Q ss_pred cHHHHHHHhCCCCCchHHHHHHHHHHH-cccCCCCCC
Q 036311 458 KIKDMKEIFHAVDNSSMESIIKEALGD-CERAPSAGE 493 (632)
Q Consensus 458 kL~eIL~~Fsi~~~S~~A~~m~~TL~~-CE~pp~~GE 493 (632)
.|.+||..|-|+. +.|-.|+.||+. ||+-|.+-|
T Consensus 22 ~ledilaqfeis~--~~ayniqr~l~~ice~hpdece 56 (70)
T d2vqca1 22 TLEDILAQFEISV--PSAYNIQRALKAICERHPDECE 56 (70)
T ss_dssp CHHHHHHHHCCCH--HHHHHHHHHHHHHHHHCTTTEE
T ss_pred cHHHHHHHheecc--chHhHHHHHHHHHHhcCCchhh
Confidence 3889999999864 567788899875 998876544
No 2
>d1miwa1 a.173.1.1 (A:140-404) tRNA CCA-adding enzyme, C-terminal domains {Bacillus stearothermophilus [TaxId: 1422]}
Probab=11.46 E-value=67 Score=27.99 Aligned_cols=45 Identities=18% Similarity=0.142 Sum_probs=32.4
Q ss_pred HHHHHHhCCCCCchHHHHHHHHHHHcccCCCCCCcccccCchhhhHHHHHhh
Q 036311 460 KDMKEIFHAVDNSSMESIIKEALGDCERAPSAGETKRCVGSVEDMIDFATSI 511 (632)
Q Consensus 460 ~eIL~~Fsi~~~S~~A~~m~~TL~~CE~pp~~GEtK~CaTSLESMvDFa~S~ 511 (632)
.+|+++++++||..+.++++.. +..-+.|+ +.++.|++++|+...
T Consensus 213 ~dL~~~~g~~pGp~iG~il~~l----~~~~l~~~---~~n~ke~l~~~l~~~ 257 (265)
T d1miwa1 213 KDVIEWVGKPAGPWVKEALDAI----WRAVVNGE---VENEKERIYAWLMER 257 (265)
T ss_dssp HHHHHHHTCCSSHHHHHHHHHH----HHHHHTTS---SCSCHHHHHHHHHHH
T ss_pred HHHHHHcCCCCCHHHHHHHHHH----HHHHHcCC---CCCCHHHHHHHHHHh
Confidence 4688889999998777665544 33444455 567899999998754
No 3
>d2jdqd1 d.361.1.1 (D:688-756) Polymerase basic protein 2, BP2 {Influenza A virus [TaxId: 11320]}
Probab=9.72 E-value=93 Score=23.61 Aligned_cols=24 Identities=13% Similarity=0.039 Sum_probs=19.9
Q ss_pred HhhCCCCCCCceeeeeeCCceEEee
Q 036311 606 LALGSGPGKIEVCHWIFENDMTWTT 630 (632)
Q Consensus 606 ~~L~vKPG~~pVCHfi~~~~ivWvp 630 (632)
++-+++||+ ..--||.++++|||.
T Consensus 25 eLs~L~kGE-kANvligqg~~v~v~ 48 (69)
T d2jdqd1 25 ELSNLAKGE-KANVLIGQGDVVLVM 48 (69)
T ss_dssp GGGGSCTTC-EEEEEEETTEEEEEE
T ss_pred HHhhcCccc-cccEEEeCCCEEEEE
Confidence 456778997 677799999999995
No 4
>d1rqpa2 c.132.1.1 (A:8-192) 5'-fluoro-5'-deoxyadenosine synthase {Streptomyces cattleya [TaxId: 29303]}
Probab=9.27 E-value=76 Score=28.50 Aligned_cols=38 Identities=24% Similarity=0.417 Sum_probs=29.8
Q ss_pred eEEEEeecCCCCCCCCchhHHhhCCCCCCCceeeeeeCCceEEeec
Q 036311 586 HGVAICHLDTSAWSPTHGAFLALGSGPGKIEVCHWIFENDMTWTTA 631 (632)
Q Consensus 586 ~AVAVCH~DTS~WnP~H~aF~~L~vKPG~~pVCHfi~~~~ivWvpa 631 (632)
+-|-||| +.+.||..|.||.+.. .|+++|++.|.=+-+
T Consensus 32 ~IVDItH-~I~pfdi~~aA~~L~~-------~~~~FP~gTVhl~vV 69 (185)
T d1rqpa2 32 TVVDVCH-SMTPWDVEEGARYIVD-------LPRFFPEGTVFATTT 69 (185)
T ss_dssp EEEEEES-CSCTTCHHHHHHTTTT-------CGGGSCTTCEEEEEC
T ss_pred CEEEccC-CCCCCCHHHHHHHHHH-------HHhhCCCccEEEEEe
Confidence 4589999 8999999999998874 677888877654443
No 5
>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=8.76 E-value=45 Score=29.25 Aligned_cols=15 Identities=13% Similarity=0.259 Sum_probs=11.4
Q ss_pred ceEEEEeecCCCCCC
Q 036311 585 NHGVAICHLDTSAWS 599 (632)
Q Consensus 585 ~~AVAVCH~DTS~Wn 599 (632)
+++++|||.|...|.
T Consensus 40 v~a~giC~sDl~~~~ 54 (192)
T d1piwa1 40 IEACGVCGSDIHCAA 54 (192)
T ss_dssp EEEEEECHHHHHHHT
T ss_pred EeeeCCCcchHHHHc
Confidence 379999999965443
No 6
>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}
Probab=7.15 E-value=90 Score=26.29 Aligned_cols=38 Identities=16% Similarity=0.303 Sum_probs=20.8
Q ss_pred eeEEeeecCceEEEEEEeeccCCcc---ccceEEEEeecCCCCC
Q 036311 558 LLYYCHSVPKVRVYEADVLDANTKA---KINHGVAICHLDTSAW 598 (632)
Q Consensus 558 aVyYCH~v~~trvY~V~L~g~d~~~---ki~~AVAVCH~DTS~W 598 (632)
||+| ...+.++=++++-....++ | +++.+|||.|...|
T Consensus 5 AVl~--g~~~l~~~e~~~P~~~~~evlVk-v~a~gic~sD~~~~ 45 (178)
T d1e3ja1 5 AVLY--KQNDLRLEQRPIPEPKEDEVLLQ-MAYVGICGSDVHYY 45 (178)
T ss_dssp EEEE--ETTEEEEEECCCCCCCTTEEEEE-EEEEEECHHHHHHH
T ss_pred EEEE--cCCcEEEEEeECCCCCCCEEEEE-EEEEcccCchhhhh
Confidence 4544 3344555555553322222 3 36999999997433
No 7
>d1kg1a_ g.70.1.1 (A:) Necrosis inducing protein 1, NIP1 {Leaf blotch of barley (Rhynchosporium secalis) [TaxId: 38038]}
Probab=6.32 E-value=75 Score=23.18 Aligned_cols=9 Identities=67% Similarity=1.350 Sum_probs=6.0
Q ss_pred ccccCCCCC
Q 036311 271 SNYGEGANG 279 (632)
Q Consensus 271 ~~Yg~~gN~ 279 (632)
-+||+|||+
T Consensus 42 csygeggng 50 (60)
T d1kg1a_ 42 CSYGEGGNG 50 (60)
T ss_dssp CCBCTTSSC
T ss_pred EeecCCCCc
Confidence 467777765
No 8
>d1sbza_ c.34.1.1 (A:) Probable aromatic acid decarboxylase Pad1 {Escherichia coli O157:H7 [TaxId: 83334]}
Probab=5.50 E-value=1.4e+02 Score=25.75 Aligned_cols=23 Identities=13% Similarity=0.215 Sum_probs=18.4
Q ss_pred CCCCCCcccccCchhhhHHHHHhh
Q 036311 488 APSAGETKRCVGSVEDMIDFATSI 511 (632)
Q Consensus 488 pp~~GEtK~CaTSLESMvDFa~S~ 511 (632)
||+.|- ..+..++|+|+||++.+
T Consensus 146 pp~~g~-y~~p~~~~dl~~~~v~r 168 (186)
T d1sbza_ 146 PPMPAF-YNHPETVDDIVHHVVAR 168 (186)
T ss_dssp CCCCCC-TTCCCBHHHHHHHHHHH
T ss_pred CCChhh-hcCCCCHHHHHHHHHHH
Confidence 566664 67899999999998755
No 9
>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}
Probab=5.20 E-value=1.2e+02 Score=26.14 Aligned_cols=32 Identities=19% Similarity=0.268 Sum_probs=19.7
Q ss_pred EEEEEEeeccCCcc---ccceEEEEeecCCCCCCCC
Q 036311 569 RVYEADVLDANTKA---KINHGVAICHLDTSAWSPT 601 (632)
Q Consensus 569 rvY~V~L~g~d~~~---ki~~AVAVCH~DTS~WnP~ 601 (632)
++-+|++-....++ | +++..|||.|...|...
T Consensus 22 ~i~evp~P~p~~geVlVk-v~a~gic~sD~~~~~G~ 56 (202)
T d1e3ia1 22 CIEEIEVSPPKACEVRIQ-VIATCVCPTDINATDPK 56 (202)
T ss_dssp EEEEEEECCCCTTEEEEE-EEEEECCHHHHHTTCTT
T ss_pred EEEEEECCCCCCCEEEEE-EEEEEEeccccceeeee
Confidence 44455554333222 3 36999999998877643
No 10
>d1f60a2 b.44.1.1 (A:335-441) Elongation factor eEF-1alpha, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=5.07 E-value=3.5e+02 Score=21.50 Aligned_cols=21 Identities=14% Similarity=0.332 Sum_probs=16.8
Q ss_pred CCCchhHHhhCCCCCCCceeeeeeCCce
Q 036311 599 SPTHGAFLALGSGPGKIEVCHWIFENDM 626 (632)
Q Consensus 599 nP~H~aF~~L~vKPG~~pVCHfi~~~~i 626 (632)
+|++ ++.|+..+|.+.+..-|
T Consensus 54 ~P~~-------l~~g~~a~v~i~~~~pi 74 (107)
T d1f60a2 54 HPKF-------LKSGDAALVKFVPSKPM 74 (107)
T ss_dssp SCSC-------BCTTCEEEEEEEESSCC
T ss_pred CCcc-------cCCCCEEEEEEEeCCCC
Confidence 6776 58999999999887654
Done!