Query 036312
Match_columns 305
No_of_seqs 147 out of 805
Neff 3.9
Searched_HMMs 29240
Date Mon Mar 25 19:39:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036312.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036312hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1hbk_A ACBP, acyl-COA binding 100.0 1.1E-32 3.8E-37 218.4 11.3 88 147-241 2-89 (89)
2 2cop_A Acyl-coenzyme A binding 100.0 1.6E-32 5.4E-37 225.4 11.2 94 143-245 4-97 (109)
3 1st7_A ACBP, acyl-COA-binding 100.0 1.6E-32 5.3E-37 216.3 8.4 85 147-240 1-85 (86)
4 3epy_A Acyl-COA-binding domain 100.0 8.4E-32 2.9E-36 214.0 9.7 86 146-240 3-88 (89)
5 2cqu_A Peroxisomal D3,D2-enoyl 100.0 1.8E-31 6.2E-36 221.6 11.1 94 143-245 12-105 (116)
6 2cb8_A Acyl-COA-binding protei 100.0 3.9E-31 1.3E-35 209.1 9.6 84 148-240 3-86 (87)
7 2lbb_A Acyl COA binding protei 100.0 6.1E-31 2.1E-35 212.2 8.3 84 150-241 13-96 (96)
8 2wh5_A Acyl-COA-binding domain 100.0 1.4E-30 4.7E-35 213.2 8.9 91 145-242 6-98 (106)
9 3fp5_A Acyl-COA binding protei 100.0 3E-30 1E-34 211.3 9.3 85 147-238 4-90 (106)
10 3flv_A Acyl-COA-binding domain 100.0 2.1E-30 7E-35 216.4 8.0 92 144-240 21-112 (119)
11 1mix_A Talin; focal adhesion, 98.3 3.7E-06 1.3E-10 71.8 10.2 86 147-242 18-117 (206)
12 4f7g_A Talin-1; alpha-helix bu 95.2 0.09 3.1E-06 45.7 9.2 85 146-240 28-126 (222)
13 1ef1_A Moesin; membrane, FERM 95.2 0.11 3.6E-06 46.6 9.8 86 147-242 96-201 (294)
14 1h4r_A Merlin; FERM, neurofibr 94.9 0.11 3.7E-06 47.3 9.2 86 147-242 116-221 (314)
15 3qij_A Protein 4.1; cytoskelet 94.9 0.11 3.7E-06 47.5 9.1 84 149-242 112-207 (296)
16 3ivf_A Talin-1; FERM domain, c 94.3 0.25 8.4E-06 46.1 10.3 84 147-240 183-280 (371)
17 2i1j_A Moesin; FERM, coiled-co 93.6 0.24 8.1E-06 50.0 9.3 86 147-242 99-204 (575)
18 3au4_A Myosin-X; protein-prote 92.1 0.59 2E-05 45.9 9.6 86 147-242 321-453 (555)
19 4dxa_B KREV interaction trappe 88.0 0.93 3.2E-05 41.5 6.6 84 147-240 114-222 (322)
20 2al6_A Focal adhesion kinase 1 87.4 0.82 2.8E-05 43.0 6.0 86 147-241 114-225 (375)
21 3pvl_A Myosin VIIA isoform 1; 77.4 6.3 0.00022 40.3 8.2 87 147-242 370-478 (655)
22 4eku_A Protein-tyrosine kinase 75.0 4.3 0.00015 38.9 6.0 89 145-242 132-246 (392)
23 2j0j_A Focal adhesion kinase 1 34.4 45 0.0015 33.2 5.2 63 173-235 132-220 (656)
24 2fly_A Proadrenomedullin N-20 23.8 29 0.00099 21.9 1.1 10 205-214 8-17 (26)
No 1
>1hbk_A ACBP, acyl-COA binding protein; fatty acid metabolism; HET: COA MYR; 2.0A {Plasmodium falciparum} SCOP: a.11.1.1
Probab=99.98 E-value=1.1e-32 Score=218.38 Aligned_cols=88 Identities=28% Similarity=0.595 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHHhhhhcccccCCCCCCCChHHHHHHHHHhhhhhcCCCCCCCCCccChhhhHHHHHHHHcCCCCHHHHHH
Q 036312 147 LENVFATAVKFVEVSESQSESGKKRDDALSDVHMELYALHKIATEGPCRDPQPMPLMLSARSKWNAWQKLGNMNPEEAME 226 (305)
Q Consensus 147 LEe~Fe~Avk~Vk~~~~~~~s~p~~~~ls~D~kL~LYALYKQAT~GdCn~~kPg~~D~vgRaKWdAWkkLgGMSkEEAmk 226 (305)
|++.|++|+++|+ .++...+|+++++|+|||||||||+|||++++||+||++||+||+||++++|||+++||+
T Consensus 2 l~~~F~~A~~~v~-------~l~~~~~~~~~~~L~LYalyKQAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~gms~eeA~~ 74 (89)
T 1hbk_A 2 MAQVFEECVSFIN-------GLPRTINLPNELKLDLYKYYKQSTIGNCNIKEPSAHKYIDRKKYEAWKSVENLNREDAQK 74 (89)
T ss_dssp HHHHHHHHHHHHH-------HSCTTCCCCHHHHHHHHHHHHHHHTCSCCSCCCCTTSHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred hHHHHHHHHHHHH-------hcCCcCCCCHHHHHHHHHHHHHhhcCCCCCCCCCccCHHhHHHHHHHHHhcCCCHHHHHH
Confidence 6789999999999 233236899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccccc
Q 036312 227 RYVALLSDRVPDWKE 241 (305)
Q Consensus 227 ~YIeLV~el~P~W~~ 241 (305)
+||+++++++|.|.+
T Consensus 75 ~YI~~v~~l~~~~~~ 89 (89)
T 1hbk_A 75 RYVDIVSEIFPYWQD 89 (89)
T ss_dssp HHHHHHHHHCTTTTC
T ss_pred HHHHHHHHHcccccC
Confidence 999999999999973
No 2
>2cop_A Acyl-coenzyme A binding domain containing 6; acyl COA binding protein, COA binding protein, lipid binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.98 E-value=1.6e-32 Score=225.40 Aligned_cols=94 Identities=28% Similarity=0.545 Sum_probs=87.2
Q ss_pred ccchHHHHHHHHHHHHhhhhcccccCCCCCCCChHHHHHHHHHhhhhhcCCCCCCCCCccChhhhHHHHHHHHcCCCCHH
Q 036312 143 ERSELENVFATAVKFVEVSESQSESGKKRDDALSDVHMELYALHKIATEGPCRDPQPMPLMLSARSKWNAWQKLGNMNPE 222 (305)
Q Consensus 143 e~seLEe~Fe~Avk~Vk~~~~~~~s~p~~~~ls~D~kL~LYALYKQAT~GdCn~~kPg~~D~vgRaKWdAWkkLgGMSkE 222 (305)
++++|++.|++|+++|+ . +...|+++++|+|||||||||+|||++++|++||+++|+||+||++|+|||++
T Consensus 4 ~~~~l~~~F~~A~~~vk-------~--l~~~p~~~~~L~LYaLyKQAt~Gd~~~~~Pg~~d~~~raKw~AW~~l~gms~e 74 (109)
T 2cop_A 4 GSSGLAELFEKAAAHLQ-------G--LIQVASREQLLYLYARYKQVKVGNCNTPKPSFFDFEGKQKWEAWKALGDSSPS 74 (109)
T ss_dssp CCCCSHHHHHHHHHHHT-------T--STTTSCHHHHHHHHHHHHHHHTCSCCSCCCCSSCHHHHHHHHHHHSCTTCCHH
T ss_pred cchHHHHHHHHHHHHHH-------H--cccCCCHHHHHHHHHHHHHhhcCCCCCCCCCccCHHHHHHHHHHHHhcCCCHH
Confidence 45779999999999999 2 24579999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcccccccccc
Q 036312 223 EAMERYVALLSDRVPDWKEENYH 245 (305)
Q Consensus 223 EAmk~YIeLV~el~P~W~~~~~~ 245 (305)
+||++||++|.+++|.|......
T Consensus 75 eAm~~YI~lv~~l~~~~~~~~~~ 97 (109)
T 2cop_A 75 QAMQEYIAVVKKLDPGWNPQIPE 97 (109)
T ss_dssp HHHHHHHHHHHHHCTTCCCCCCC
T ss_pred HHHHHHHHHHHHHhhhhcccchh
Confidence 99999999999999999977553
No 3
>1st7_A ACBP, acyl-COA-binding protein; four helix bundle, transport protein; NMR {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.6e-32 Score=216.31 Aligned_cols=85 Identities=29% Similarity=0.494 Sum_probs=80.4
Q ss_pred HHHHHHHHHHHHhhhhcccccCCCCCCCChHHHHHHHHHhhhhhcCCCCCCCCCccChhhhHHHHHHHHcCCCCHHHHHH
Q 036312 147 LENVFATAVKFVEVSESQSESGKKRDDALSDVHMELYALHKIATEGPCRDPQPMPLMLSARSKWNAWQKLGNMNPEEAME 226 (305)
Q Consensus 147 LEe~Fe~Avk~Vk~~~~~~~s~p~~~~ls~D~kL~LYALYKQAT~GdCn~~kPg~~D~vgRaKWdAWkkLgGMSkEEAmk 226 (305)
|++.|++|+++|+ .+ ..+|+++++|+|||||||||+|||++++||+||+++|+||+||++++|||+++||+
T Consensus 1 l~~~F~~A~~~v~-------~l--~~~~~~~~~L~lYalyKQAt~Gd~~~~~Pg~~d~~~raKw~AW~~l~gms~eeA~~ 71 (86)
T 1st7_A 1 VSQLFEEKAKAVN-------EL--PTKPSTDELLELYALYKQATVGDNDKEKPGIFNMKDRYKWEAWENLKGKSQEDAEK 71 (86)
T ss_dssp CHHHHHHHHHHHT-------SC--SSCCCHHHHHHHHHHHHHHHHCSCCCCCCCSSCHHHHHHHHHHHTTTTTHHHHHHH
T ss_pred CHHHHHHHHHHHH-------Hc--cCCcCHHHHHHHHHHHHHHhhCCCCCCCCCccCHHHHHHHHHHHHcCCCCHHHHHH
Confidence 4689999999999 32 46899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccccc
Q 036312 227 RYVALLSDRVPDWK 240 (305)
Q Consensus 227 ~YIeLV~el~P~W~ 240 (305)
+||+++.+++|.|.
T Consensus 72 ~YI~~v~~l~~~~~ 85 (86)
T 1st7_A 72 EYIALVDQLIAKYS 85 (86)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhhhhc
Confidence 99999999999996
No 4
>3epy_A Acyl-COA-binding domain-containing protein 7; acyl-COA binding protein, fatty acid, lipid metabolism, structural genomics; HET: COA PLM; 2.00A {Homo sapiens} SCOP: a.11.1.1
Probab=99.97 E-value=8.4e-32 Score=213.99 Aligned_cols=86 Identities=24% Similarity=0.344 Sum_probs=81.1
Q ss_pred hHHHHHHHHHHHHhhhhcccccCCCCCCCChHHHHHHHHHhhhhhcCCCCCCCCCccChhhhHHHHHHHHcCCCCHHHHH
Q 036312 146 ELENVFATAVKFVEVSESQSESGKKRDDALSDVHMELYALHKIATEGPCRDPQPMPLMLSARSKWNAWQKLGNMNPEEAM 225 (305)
Q Consensus 146 eLEe~Fe~Avk~Vk~~~~~~~s~p~~~~ls~D~kL~LYALYKQAT~GdCn~~kPg~~D~vgRaKWdAWkkLgGMSkEEAm 225 (305)
.|++.|++|+++|+ ++ ..+|+++++|+|||||||||+|||+.++||+||+++|+||+||++++|||+++||
T Consensus 3 ~L~~~F~~A~~~vk-------~l--~~~p~~~~~L~lYalyKQAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~g~s~eeA~ 73 (89)
T 3epy_A 3 ALQADFDRAAEDVR-------KL--KARPDDGELKELYGLYKQAIVGDINIACPGMLDLKGKAKWEAWNLKKGLSTEDAT 73 (89)
T ss_dssp HHHHHHHHHHHHGG-------GC--SSCCCHHHHHHHHHHHHHHHTCSCCSCCTTTTCHHHHHHHHHHHTTTTCCHHHHH
T ss_pred cHHHHHHHHHHHHH-------Hc--CCCcCHHHHHHHHHHHHHHhhCCCCCCCCcccchHHHHHHHHHHHhhCCCHHHHH
Confidence 48999999999999 32 4689999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccccc
Q 036312 226 ERYVALLSDRVPDWK 240 (305)
Q Consensus 226 k~YIeLV~el~P~W~ 240 (305)
++||+++++++|.|.
T Consensus 74 ~~Yi~~v~~l~~ky~ 88 (89)
T 3epy_A 74 SAYISKAKELIEKYG 88 (89)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhhhhc
Confidence 999999999999874
No 5
>2cqu_A Peroxisomal D3,D2-enoyl-COA isomerase; acyl-COA binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.97 E-value=1.8e-31 Score=221.62 Aligned_cols=94 Identities=33% Similarity=0.569 Sum_probs=86.3
Q ss_pred ccchHHHHHHHHHHHHhhhhcccccCCCCCCCChHHHHHHHHHhhhhhcCCCCCCCCCccChhhhHHHHHHHHcCCCCHH
Q 036312 143 ERSELENVFATAVKFVEVSESQSESGKKRDDALSDVHMELYALHKIATEGPCRDPQPMPLMLSARSKWNAWQKLGNMNPE 222 (305)
Q Consensus 143 e~seLEe~Fe~Avk~Vk~~~~~~~s~p~~~~ls~D~kL~LYALYKQAT~GdCn~~kPg~~D~vgRaKWdAWkkLgGMSkE 222 (305)
-+.++++.|++|+++|+ .+ ...|+++++|+|||||||||+|||+.++|++||+++|+||+||++|+|||++
T Consensus 12 ~m~~~~~~F~~A~~~vk-------~l--~~~p~~~~~L~LYaLyKQAt~Gd~~~~~Pg~~d~~graKw~AW~~l~gms~e 82 (116)
T 2cqu_A 12 AMRASQKDFENSMNQVK-------LL--KKDPGNEVKLKLYALYKQATEGPCNMPKPGVFDLINKAKWDAWNALGSLPKE 82 (116)
T ss_dssp SCCCCHHHHHHHHHHHH-------HC--CSCCCHHHHHHHHHHHTTTTTCSCCSCCCCTTCHHHHHHHHHHHHHCSCCHH
T ss_pred cHHHHHHHHHHHHHHHH-------Hc--cCCCCHHHHHHHHHHHHHHhcCCCCCCCCCcccHHHHHHHHHHHHhcCCCHH
Confidence 35668999999999999 22 3578999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcccccccccc
Q 036312 223 EAMERYVALLSDRVPDWKEENYH 245 (305)
Q Consensus 223 EAmk~YIeLV~el~P~W~~~~~~ 245 (305)
+||++||++|++++|.|......
T Consensus 83 eAm~~YI~lv~~l~~~~~~~~~~ 105 (116)
T 2cqu_A 83 AARQNYVDLVSSLSPSLESSSQV 105 (116)
T ss_dssp HHHHHHHHHHHHHCSCCCCCCCC
T ss_pred HHHHHHHHHHHHHcccccccccc
Confidence 99999999999999999976543
No 6
>2cb8_A Acyl-COA-binding protein; acyl-coenzyme A binding protein, fatty acid, acetylation, alternative splicing, lipid-binding, transport; HET: MYA; 1.4A {Homo sapiens} PDB: 2fj9_A 1aca_A* 1hb6_A 1hb8_A 1nti_A 1nvl_A* 2abd_A 2fdq_A
Probab=99.97 E-value=3.9e-31 Score=209.10 Aligned_cols=84 Identities=23% Similarity=0.401 Sum_probs=79.3
Q ss_pred HHHHHHHHHHHhhhhcccccCCCCCCCChHHHHHHHHHhhhhhcCCCCCCCCCccChhhhHHHHHHHHcCCCCHHHHHHH
Q 036312 148 ENVFATAVKFVEVSESQSESGKKRDDALSDVHMELYALHKIATEGPCRDPQPMPLMLSARSKWNAWQKLGNMNPEEAMER 227 (305)
Q Consensus 148 Ee~Fe~Avk~Vk~~~~~~~s~p~~~~ls~D~kL~LYALYKQAT~GdCn~~kPg~~D~vgRaKWdAWkkLgGMSkEEAmk~ 227 (305)
++.|++|+++|+ .+ ..+|+++++|+|||||||||+|||+.++||+||+++|+||+||++++|||+++||++
T Consensus 3 ~~~F~~A~~~vk-------~l--~~~~~~~~~L~lYalyKQAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~gms~eeA~~~ 73 (87)
T 2cb8_A 3 QAEFEKAAEEVR-------HL--KTKPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWNELKGTSKEDAMKA 73 (87)
T ss_dssp HHHHHHHHHHGG-------GC--SSCCCHHHHHHHHHHHHHHHTCSCCSCCCCTTCHHHHHHHHHHHTTTTCCHHHHHHH
T ss_pred HHHHHHHHHHHH-------Hc--cCCcCHHHHHHHHHHHHhhhhCCCCCCCCCcccHHHHHHHHHHHHcCCCCHHHHHHH
Confidence 578999999999 32 358999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccccc
Q 036312 228 YVALLSDRVPDWK 240 (305)
Q Consensus 228 YIeLV~el~P~W~ 240 (305)
||+++++++|.|.
T Consensus 74 Yi~~v~~l~~~~~ 86 (87)
T 2cb8_A 74 YINKVEELKKKYG 86 (87)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhC
Confidence 9999999999885
No 7
>2lbb_A Acyl COA binding protein; protein binding, structural genomi seattle structural genomics center for infectious disease,; NMR {Babesia bovis}
Probab=99.97 E-value=6.1e-31 Score=212.20 Aligned_cols=84 Identities=38% Similarity=0.646 Sum_probs=78.8
Q ss_pred HHHHHHHHHhhhhcccccCCCCCCCChHHHHHHHHHhhhhhcCCCCCCCCCccChhhhHHHHHHHHcCCCCHHHHHHHHH
Q 036312 150 VFATAVKFVEVSESQSESGKKRDDALSDVHMELYALHKIATEGPCRDPQPMPLMLSARSKWNAWQKLGNMNPEEAMERYV 229 (305)
Q Consensus 150 ~Fe~Avk~Vk~~~~~~~s~p~~~~ls~D~kL~LYALYKQAT~GdCn~~kPg~~D~vgRaKWdAWkkLgGMSkEEAmk~YI 229 (305)
.|++|+++|+ +++. .+|+++++|+|||||||||+|||++++||+||++||+||+||++++|||+++||++||
T Consensus 13 ~F~~A~~~vk-------~l~~-~~ps~~~~L~LYaLyKQAt~Gd~~~~~Pg~~d~~graKw~AW~~l~gmS~eeAm~~YI 84 (96)
T 2lbb_A 13 DFDAAVKYVS-------NTTT-MMASNDDKLCFYKYYKQATVGDCNKPKPGMLQLQEKYKWEAWNALRGMSTESAKEAYV 84 (96)
T ss_dssp THHHHHHHHH-------HCCC-SCCCTTTTTHHHHHHHHTTTSSCCCCCCCSSCSHHHHHHHHHHHTTTCCHHHHHHHHH
T ss_pred HHHHHHHHHH-------hCCC-CCCCHHHHHHHHHHHHHHhcCCCCCCCCCcccHHhHHHHHHHHHhcCCCHHHHHHHHH
Confidence 5999999999 3332 6899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccccc
Q 036312 230 ALLSDRVPDWKE 241 (305)
Q Consensus 230 eLV~el~P~W~~ 241 (305)
+++++++|.|.+
T Consensus 85 ~lv~~l~~~~~~ 96 (96)
T 2lbb_A 85 KLLDTLAPSWRN 96 (96)
T ss_dssp HHHHHHCGGGTC
T ss_pred HHHHHHhchhcC
Confidence 999999999973
No 8
>2wh5_A Acyl-COA-binding domain-containing protein 4; alternative splicing, fatty acid metabolism, lipid transport, lipid binding protein; HET: STE ST9 COA; 2.60A {Homo sapiens}
Probab=99.96 E-value=1.4e-30 Score=213.20 Aligned_cols=91 Identities=29% Similarity=0.446 Sum_probs=81.1
Q ss_pred chHHHHHHHHHHHHhhhhcccccCCCC--CCCChHHHHHHHHHhhhhhcCCCCCCCCCccChhhhHHHHHHHHcCCCCHH
Q 036312 145 SELENVFATAVKFVEVSESQSESGKKR--DDALSDVHMELYALHKIATEGPCRDPQPMPLMLSARSKWNAWQKLGNMNPE 222 (305)
Q Consensus 145 seLEe~Fe~Avk~Vk~~~~~~~s~p~~--~~ls~D~kL~LYALYKQAT~GdCn~~kPg~~D~vgRaKWdAWkkLgGMSkE 222 (305)
.+|++.|++|+++|+. ++.. .+|+++++|+|||||||||+|||+.++||+||+++|+||+||++++|||++
T Consensus 6 ~~l~~~F~~A~~~vk~-------l~~~g~~~ps~e~~L~LYaLyKQAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~gms~e 78 (106)
T 2wh5_A 6 PDCQKQFQAAVSVIQN-------LPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDAWNSLGKMSRE 78 (106)
T ss_dssp ---CHHHHHHHHHHHH-------SCSSCSCCCCHHHHHHHHHHHHHHHHCSCCSCCCCTTCHHHHHHHHHHHTTTTCCHH
T ss_pred hHHHHHHHHHHHHHHh-------ccccCCCCCCHHHHHHHHHHHhhhccCCCCCCCCCcccHHHHHHHHHHHHhcCCCHH
Confidence 5688999999999993 2322 379999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhccccccc
Q 036312 223 EAMERYVALLSDRVPDWKEE 242 (305)
Q Consensus 223 EAmk~YIeLV~el~P~W~~~ 242 (305)
+||++||+++++++|.+.+.
T Consensus 79 eA~~~YI~~v~~l~~k~~~t 98 (106)
T 2wh5_A 79 EAMSAYITEMKLVAQKVIDT 98 (106)
T ss_dssp HHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHhhcc
Confidence 99999999999999988754
No 9
>3fp5_A Acyl-COA binding protein; ACBP, cacao disease, fatty acid metabolism, lipid binding protein; HET: MES; 1.61A {Moniliophthora perniciosa} SCOP: a.11.1.0
Probab=99.96 E-value=3e-30 Score=211.27 Aligned_cols=85 Identities=26% Similarity=0.411 Sum_probs=79.0
Q ss_pred HHHHHHHHHHHHhhhhcccccCCCC--CCCChHHHHHHHHHhhhhhcCCCCCCCCCccChhhhHHHHHHHHcCCCCHHHH
Q 036312 147 LENVFATAVKFVEVSESQSESGKKR--DDALSDVHMELYALHKIATEGPCRDPQPMPLMLSARSKWNAWQKLGNMNPEEA 224 (305)
Q Consensus 147 LEe~Fe~Avk~Vk~~~~~~~s~p~~--~~ls~D~kL~LYALYKQAT~GdCn~~kPg~~D~vgRaKWdAWkkLgGMSkEEA 224 (305)
+++.|++|+++|+ +++.. .+|+++++|+|||||||||+|||+.++||+||+++|+||+||++++|||+++|
T Consensus 4 ~~~~F~~A~~~vk-------~l~~~g~~~ps~~~~L~LYalyKQAt~Gd~~~~~Pg~~d~~~raKw~AW~~l~gmS~eeA 76 (106)
T 3fp5_A 4 SKAKFDKAVEIVQ-------SLPKDGPIKPTQDEQLYFYKYFKQATVGDVNISRPGLMDFTGKAKWDAWKSVEGTSKEVA 76 (106)
T ss_dssp CHHHHHHHHHHHH-------HCCSSSSSCCCHHHHHHHHHHHHHHHTCSCCSCCCCTTCHHHHHHHHHHHTTTTCCHHHH
T ss_pred hHHHHHHHHHHHH-------hcccccCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCccchHHHHHHHHHHHccCCCHHHH
Confidence 5789999999999 33332 47999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccc
Q 036312 225 MERYVALLSDRVPD 238 (305)
Q Consensus 225 mk~YIeLV~el~P~ 238 (305)
|++||+++.++++.
T Consensus 77 ~~~YI~~v~~l~~~ 90 (106)
T 3fp5_A 77 YQKYVEKLLEILKK 90 (106)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcc
Confidence 99999999999987
No 10
>3flv_A Acyl-COA-binding domain-containing protein 5; lipid binding, structural genomics, struct genomics consortium, SGC, lipid-binding, membrane; HET: STE COA; 1.70A {Homo sapiens}
Probab=99.96 E-value=2.1e-30 Score=216.38 Aligned_cols=92 Identities=33% Similarity=0.543 Sum_probs=82.2
Q ss_pred cchHHHHHHHHHHHHhhhhcccccCCCCCCCChHHHHHHHHHhhhhhcCCCCCCCCCccChhhhHHHHHHHHcCCCCHHH
Q 036312 144 RSELENVFATAVKFVEVSESQSESGKKRDDALSDVHMELYALHKIATEGPCRDPQPMPLMLSARSKWNAWQKLGNMNPEE 223 (305)
Q Consensus 144 ~seLEe~Fe~Avk~Vk~~~~~~~s~p~~~~ls~D~kL~LYALYKQAT~GdCn~~kPg~~D~vgRaKWdAWkkLgGMSkEE 223 (305)
+++|++.|++|+++|+.. +..+ ..+|+++++|+|||||||||+|||+.++||+||+++|+||+||++++|||+++
T Consensus 21 ~~dLe~~F~~A~~~Vk~l---~~~g--~~~ps~d~~L~LYaLyKQAT~Gd~~~~~Pg~~d~~graKw~AW~~l~gmS~ee 95 (119)
T 3flv_A 21 QSMHETRFEAAVKVIQSL---PKNG--SFQPTNEMMLKFYSFYKQATEGPCKLSRPGFWDPIGRYKWDAWSSLGDMTKEE 95 (119)
T ss_dssp -CHHHHHHHHHHHHHHHH---HHHS--SCCCCHHHHHHHHHHHHHHHTCSCCSCCCCTTCHHHHHHHHHHHHTTTCCHHH
T ss_pred hhHHHHHHHHHHHHHHhC---cccC--CCCCCHHHHHHHHHHHHHHhcCCCCCCCCCccCHHHHHHHHHHHHccCCCHHH
Confidence 678999999999999932 1111 23689999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhccccc
Q 036312 224 AMERYVALLSDRVPDWK 240 (305)
Q Consensus 224 Amk~YIeLV~el~P~W~ 240 (305)
||++||++++++++.+.
T Consensus 96 Am~~YI~~v~~l~~~~~ 112 (119)
T 3flv_A 96 AMIAYVEEMKKIIETMP 112 (119)
T ss_dssp HHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHhhCC
Confidence 99999999999998764
No 11
>1mix_A Talin; focal adhesion, integrin binding, FERM domain, cytoskeleton, structural protein; 1.75A {Gallus gallus} SCOP: a.11.2.1 b.55.1.5 PDB: 1miz_B 1mk7_B 1mk9_B 1y19_B 3g9w_A 2hrj_A 2g35_A* 2k00_A 2h7d_A* 2h7e_A* 2kgx_B
Probab=98.29 E-value=3.7e-06 Score=71.78 Aligned_cols=86 Identities=24% Similarity=0.263 Sum_probs=68.8
Q ss_pred HHHHHHHHHHHHhhhhcccccCCCCCCCChHHHHHHHHHhhhhhcCCCCCC--CCCccChh------------hhHHHHH
Q 036312 147 LENVFATAVKFVEVSESQSESGKKRDDALSDVHMELYALHKIATEGPCRDP--QPMPLMLS------------ARSKWNA 212 (305)
Q Consensus 147 LEe~Fe~Avk~Vk~~~~~~~s~p~~~~ls~D~kL~LYALYKQAT~GdCn~~--kPg~~D~v------------gRaKWdA 212 (305)
+.--|.++..-+- ++. -+.+.++.+.|.||..||..||++.. .|+.+++. .+..+++
T Consensus 18 ~~l~y~Q~~~dil-------~g~--~~~~~~~a~~Laal~~qa~~Gd~~~~~~~~~~~~~~~~lP~~~~~~~~~~~i~~~ 88 (206)
T 1mix_A 18 LNLLYVQARDDIL-------NGS--HPVSFDKACEFAGYQCQIQFGPHNEQKHKPGFLELKDFLPKEYIKQKGERKIFMA 88 (206)
T ss_dssp HHHHHHHHHHHHH-------TTS--SCCCHHHHHHHHHHHHHHHHCSCCTTTSCTTCSCGGGTSCGGGSTTCCHHHHHHH
T ss_pred HHHHHHHHHHHHH-------CCc--cccCHHHHHHHHHHhhhheecCCCcccccCCccchHhhCCHHHhhcccHHHHHHH
Confidence 5567888888776 332 46789999999999999999999874 46655533 6678999
Q ss_pred HHHcCCCCHHHHHHHHHHHHHhhccccccc
Q 036312 213 WQKLGNMNPEEAMERYVALLSDRVPDWKEE 242 (305)
Q Consensus 213 WkkLgGMSkEEAmk~YIeLV~el~P~W~~~ 242 (305)
|++++|||+.+||.+|++++.++ |.|...
T Consensus 89 ~~~~~g~s~~~A~~~yL~~~~~l-~~yG~~ 117 (206)
T 1mix_A 89 HKNCGNMSEIEAKVRYVKLARSL-KTYGVS 117 (206)
T ss_dssp HHHTTTCCHHHHHHHHHHHHHHS-TTTTCE
T ss_pred HHHccCCCHHHHHHHHHHHHHhC-cccCce
Confidence 99999999999999999999765 665544
No 12
>4f7g_A Talin-1; alpha-helix bundle, integrin activation, cell adhesion; 2.05A {Mus musculus}
Probab=95.22 E-value=0.09 Score=45.71 Aligned_cols=85 Identities=22% Similarity=0.254 Sum_probs=62.0
Q ss_pred hHHHHHHHHHHHHhhhhcccccCCCCCCCChHHHHHHHHHhhhhhcCCCCCCC--CCccCh-----------h-hhHHHH
Q 036312 146 ELENVFATAVKFVEVSESQSESGKKRDDALSDVHMELYALHKIATEGPCRDPQ--PMPLML-----------S-ARSKWN 211 (305)
Q Consensus 146 eLEe~Fe~Avk~Vk~~~~~~~s~p~~~~ls~D~kL~LYALYKQAT~GdCn~~k--Pg~~D~-----------v-gRaKWd 211 (305)
.+.--|.++..-+- .+. -+.+.++-+.|=||--||..||++... |+.+.. . .+.=..
T Consensus 28 ~l~l~ylQ~~~dil-------~G~--~~~~~e~a~~LAal~~Qae~Gd~~~~~~~~~~~~l~~~lP~~~~~~~~~~~I~~ 98 (222)
T 4f7g_A 28 QLNLLYVQARDDIL-------NGS--HPVSFDKACEFAGFQCQIQFGPHNEQKHKAGFLDLKDFLPKEYVKQKGERKIFQ 98 (222)
T ss_dssp HHHHHHHHHHHHHH-------TTS--SCCCHHHHHHHHHHHHHHHHCSCCTTTSCSSCSCGGGTSCGGGGGGCCHHHHHH
T ss_pred HHHHHHHHHHHHHh-------CCc--ccCCHHHHHHHHHHHHHHHHCCCCchhcccCccchhhccCHHHHhhhhHHHHHH
Confidence 35666777777775 332 357889999999999999999998642 332221 1 112257
Q ss_pred HHHHcCCCCHHHHHHHHHHHHHhhccccc
Q 036312 212 AWQKLGNMNPEEAMERYVALLSDRVPDWK 240 (305)
Q Consensus 212 AWkkLgGMSkEEAmk~YIeLV~el~P~W~ 240 (305)
.|++++|||+.+|+.+|++++.++ |.|.
T Consensus 99 ~h~~~~g~s~~eA~~~yL~~~~~l-~~yG 126 (222)
T 4f7g_A 99 AHKNCGQMSEIEAKVRYVKLARSL-KTYG 126 (222)
T ss_dssp HHHTTTTCCHHHHHHHHHHHHHTS-TTTT
T ss_pred HHHhccCCCHHHHHHHHHHHHhhc-cccC
Confidence 899999999999999999999865 5554
No 13
>1ef1_A Moesin; membrane, FERM domain, tail domain, membrane protein; 1.90A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1sgh_A 1j19_A 2emt_A 2ems_A 2d10_A 2d11_A 2yvc_A 2d2q_A 2zpy_A 1gc7_A 1gc6_A 1ni2_A
Probab=95.18 E-value=0.11 Score=46.63 Aligned_cols=86 Identities=13% Similarity=0.109 Sum_probs=63.4
Q ss_pred HHHHHHHHHHHHhhhhcccccCCCCCCCChHHHHHHHHHhhhhhcCCCCCCC--CCccC---hh-----h-----hHHH-
Q 036312 147 LENVFATAVKFVEVSESQSESGKKRDDALSDVHMELYALHKIATEGPCRDPQ--PMPLM---LS-----A-----RSKW- 210 (305)
Q Consensus 147 LEe~Fe~Avk~Vk~~~~~~~s~p~~~~ls~D~kL~LYALYKQAT~GdCn~~k--Pg~~D---~v-----g-----RaKW- 210 (305)
+.--|.++..-+- .+. -+.+.++.+.|=||--||..||++... |+.+. +. . ...|
T Consensus 96 ~~l~y~Q~~~dil-------~g~--~~~~~e~a~~Laal~~q~~~Gd~~~~~~~~~~l~~~~~lP~~~~~~~~~~~~~~~ 166 (294)
T 1ef1_A 96 QRLFFLQVKEGIL-------NDD--IYCPPETAVLLASYAVQSKYGDFNKEVHKSGYLAGDKLLPQRVLEQHKLNKDQWE 166 (294)
T ss_dssp HHHHHHHHHHHHH-------TTS--SCCCHHHHHHHHHHHHHHHHCSCCTTTSCTTTTTTCCCSCHHHHHHBCCCHHHHH
T ss_pred HHHHHHHHHHHHH-------cCc--ccCCHHHHHHHHHHHHHHHhCCCCccccChhhccccccCCHHHHhhcCCCHHHHH
Confidence 4566777777776 332 356789999999999999999998643 44432 11 0 2234
Q ss_pred ----HHHHHcCCCCHHHHHHHHHHHHHhhccccccc
Q 036312 211 ----NAWQKLGNMNPEEAMERYVALLSDRVPDWKEE 242 (305)
Q Consensus 211 ----dAWkkLgGMSkEEAmk~YIeLV~el~P~W~~~ 242 (305)
..|++++|||+.+|+.+|++++.+ +|.|...
T Consensus 167 ~~I~~~~~~~~g~s~~~A~~~yL~~~~~-lp~yG~~ 201 (294)
T 1ef1_A 167 ERIQVWHEEHRGMLREDAVLEYLKIAQD-LEMYGVN 201 (294)
T ss_dssp HHHHHHHHHTTTCCHHHHHHHHHHHHTT-STTTTCE
T ss_pred HHHHHHHHHccCCCHHHHHHHHHHHHcc-cCccCce
Confidence 689999999999999999999986 6776654
No 14
>1h4r_A Merlin; FERM, neurofibromatosis, NF2, structural protein, cytoskeleton, anti-oncogene; 1.8A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1isn_A 3u8z_A
Probab=94.94 E-value=0.11 Score=47.26 Aligned_cols=86 Identities=14% Similarity=0.041 Sum_probs=62.0
Q ss_pred HHHHHHHHHHHHhhhhcccccCCCCCCCChHHHHHHHHHhhhhhcCCCCCC--CCCccC---hh-----h-----hHH--
Q 036312 147 LENVFATAVKFVEVSESQSESGKKRDDALSDVHMELYALHKIATEGPCRDP--QPMPLM---LS-----A-----RSK-- 209 (305)
Q Consensus 147 LEe~Fe~Avk~Vk~~~~~~~s~p~~~~ls~D~kL~LYALYKQAT~GdCn~~--kPg~~D---~v-----g-----RaK-- 209 (305)
+.--|.++..-+- .+. -+.+.++.+.|=||--||..||++.. .|+.+. +. . ...
T Consensus 116 ~~l~y~Q~~~dil-------~g~--~~~~~e~a~~Laal~~Qa~~Gd~~~~~~~~~~~~~~~~lP~~~~~~~~~~~~~~~ 186 (314)
T 1h4r_A 116 QHLFFLQVKKQIL-------DEK--IYCPPEASVLLASYAVQAKYGDYDPSVHKRGFLAQEELLPKRVINLYQMTPEMWE 186 (314)
T ss_dssp HHHHHHHHHHHHH-------TTS--SCCCHHHHHHHHHHHHHHHHCSCCTTTSCTTTTTTCCCSCHHHHTTSCCCHHHHH
T ss_pred HHHHHHHHHHHHh-------CCC--ccCCHHHHHHHHHHHHHHHHCCCCccccchhhcchhhcCCHHHHhhccCCHHHHH
Confidence 4555667777665 332 35688999999999999999999864 344322 10 0 122
Q ss_pred ---HHHHHHcCCCCHHHHHHHHHHHHHhhccccccc
Q 036312 210 ---WNAWQKLGNMNPEEAMERYVALLSDRVPDWKEE 242 (305)
Q Consensus 210 ---WdAWkkLgGMSkEEAmk~YIeLV~el~P~W~~~ 242 (305)
-..|+++.|||+.+|+.+|++++.+ +|.|...
T Consensus 187 ~~I~~~~~~~~g~s~~eA~~~yL~~~~~-lp~yG~~ 221 (314)
T 1h4r_A 187 ERITAWYAEHRGRARDEAEMEYLKIAQD-LEMYGVN 221 (314)
T ss_dssp HHHHHHHHTTTTCCHHHHHHHHHHHHTT-STTTTCE
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHhc-cCccCce
Confidence 3789999999999999999999976 4666544
No 15
>3qij_A Protein 4.1; cytoskeleton, structural genomics, structural genomics conso SGC; 1.80A {Homo sapiens} PDB: 1gg3_A 3bin_A 2he7_A 2rq1_A
Probab=94.88 E-value=0.11 Score=47.50 Aligned_cols=84 Identities=7% Similarity=-0.035 Sum_probs=59.8
Q ss_pred HHHHHHHHHHhhhhcccccCCCCCCCChHHHHHHHHHhhhhhcCCCCCC--CCCccC-----h-----hhhHHHHHHHHc
Q 036312 149 NVFATAVKFVEVSESQSESGKKRDDALSDVHMELYALHKIATEGPCRDP--QPMPLM-----L-----SARSKWNAWQKL 216 (305)
Q Consensus 149 e~Fe~Avk~Vk~~~~~~~s~p~~~~ls~D~kL~LYALYKQAT~GdCn~~--kPg~~D-----~-----vgRaKWdAWkkL 216 (305)
--|.++..-|- .+. -+.+.++-+.|=||--||..||++.. .|+.+. + ..+.=...|+++
T Consensus 112 l~ylQ~~~dil-------~G~--~~c~~e~a~~LAAl~~Qae~Gd~~~~~~~~~yl~~~~~~P~~~~~~~~~I~~~h~~~ 182 (296)
T 3qij_A 112 YLCLQLRQDIV-------AGR--LPCSFATLALLGSYTIQSELGDYDPELHGVDYVSDFKLAPNQTKELEEKVMELHKSY 182 (296)
T ss_dssp HHHHHHHHHHH-------HTS--SCCCHHHHHHHHHHHHHHHHCSCCHHHHTTCCCTTSCCSSSCCHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHH-------cCC--CCCCHHHHHHHHHHHHHHhcCCCCccccchhhCcHhhcCCcCHHHHHHHHHHHHHHc
Confidence 34666666665 232 34678999999999999999998742 233221 1 122224689999
Q ss_pred CCCCHHHHHHHHHHHHHhhccccccc
Q 036312 217 GNMNPEEAMERYVALLSDRVPDWKEE 242 (305)
Q Consensus 217 gGMSkEEAmk~YIeLV~el~P~W~~~ 242 (305)
.|||+.+|+.+|++++.+ +|.|.-.
T Consensus 183 ~g~s~~eA~~~yL~~a~~-l~~yG~~ 207 (296)
T 3qij_A 183 RSMTPAQADLEFLENAKK-LSMYGVD 207 (296)
T ss_dssp CSCCHHHHHHHHHHHHTT-STTTTCE
T ss_pred cCCCHHHHHHHHHHHHhc-ccccCce
Confidence 999999999999999988 6766544
No 16
>3ivf_A Talin-1; FERM domain, cell membrane, cell projection, cytoskeleton, M phosphoprotein, cell adhesion, structural protein; 1.94A {Mus musculus} PDB: 2kma_A 2kc1_A
Probab=94.31 E-value=0.25 Score=46.08 Aligned_cols=84 Identities=21% Similarity=0.242 Sum_probs=61.2
Q ss_pred HHHHHHHHHHHHhhhhcccccCCCCCCCChHHHHHHHHHhhhhhcCCCCCCC--CCccC---h--------h-hhHHHHH
Q 036312 147 LENVFATAVKFVEVSESQSESGKKRDDALSDVHMELYALHKIATEGPCRDPQ--PMPLM---L--------S-ARSKWNA 212 (305)
Q Consensus 147 LEe~Fe~Avk~Vk~~~~~~~s~p~~~~ls~D~kL~LYALYKQAT~GdCn~~k--Pg~~D---~--------v-gRaKWdA 212 (305)
+.--|.++..-+- .+. -+.+.++-+.|=||.-||..||++... |+.+. + . .+.=-..
T Consensus 183 ~~l~y~Q~~~dil-------~G~--~~c~~e~a~~LAAl~~qae~Gd~~~~~~~~~~~~l~~~lP~~~~~~~~e~~I~~~ 253 (371)
T 3ivf_A 183 LNLLYVQARDDIL-------NGS--HPVSFDKACEFAGFQCQIQFGPHNEQKHKAGFLDLKDFLPKEYVKQKGERKIFQA 253 (371)
T ss_dssp HHHHHHHHHHHHH-------TSS--SCCCHHHHHHHHHHHHHHHHCSCCTTTSCTTCSCGGGTSCGGGTTSCHHHHHHHH
T ss_pred HHHHHHHhhHHHh-------Cce--eecCHHHHHHHHHHHHHHHhCCCChhhcccchhcccccCCHHHhCchHHHHHHHH
Confidence 5556777777776 332 356789999999999999999998642 33221 1 1 1222568
Q ss_pred HHHcCCCCHHHHHHHHHHHHHhhccccc
Q 036312 213 WQKLGNMNPEEAMERYVALLSDRVPDWK 240 (305)
Q Consensus 213 WkkLgGMSkEEAmk~YIeLV~el~P~W~ 240 (305)
|++++|||+.+|+.+|++++.++ |.|.
T Consensus 254 ~~~~~g~s~~eA~~~yL~~~~~l-~~yG 280 (371)
T 3ivf_A 254 HKNCGQMSEIEAKVRYVKLARSL-KTYG 280 (371)
T ss_dssp HHHTTTCCHHHHHHHHHHHHHHS-TTTT
T ss_pred HHHccCCCHHHHHHHHHHHHhcc-cccC
Confidence 99999999999999999999764 6555
No 17
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A
Probab=93.62 E-value=0.24 Score=49.96 Aligned_cols=86 Identities=22% Similarity=0.288 Sum_probs=63.1
Q ss_pred HHHHHHHHHHHHhhhhcccccCCCCCCCChHHHHHHHHHhhhhhcCCCCCC--CCCccC---hh-----h-----hHHH-
Q 036312 147 LENVFATAVKFVEVSESQSESGKKRDDALSDVHMELYALHKIATEGPCRDP--QPMPLM---LS-----A-----RSKW- 210 (305)
Q Consensus 147 LEe~Fe~Avk~Vk~~~~~~~s~p~~~~ls~D~kL~LYALYKQAT~GdCn~~--kPg~~D---~v-----g-----RaKW- 210 (305)
+.--|.++..-|- .+. -+.+.++.+.|=||--|+..||++.. .|+.+. +. . ...|
T Consensus 99 ~~LlYlQvk~dIl-------~G~--l~c~~e~a~~LAAL~lQae~GDy~~~~~~~~yl~~~~~lP~~vl~~~~~s~e~~~ 169 (575)
T 2i1j_A 99 LKLFYLQVKNAIL-------SDE--IYCPPETSVLLASYAVQARHGDHNPAVHGPGFLANDRLLPQRVTDQHKMSREEWE 169 (575)
T ss_dssp HHHHHHHHHHHHH-------TTS--SCCCHHHHHHHHHHHHHHHHCSCCTTTCCTTTTTTCCCSCHHHHHTBCCCHHHHH
T ss_pred HHHHHHHHHHHHh-------CCC--CCCCHHHHHHHHHHHHHHHhcCCChhhcccccccccccCCHHHHhhcCCCHHHHH
Confidence 4556777777665 332 35678999999999999999999864 344432 11 0 2234
Q ss_pred ----HHHHHcCCCCHHHHHHHHHHHHHhhccccccc
Q 036312 211 ----NAWQKLGNMNPEEAMERYVALLSDRVPDWKEE 242 (305)
Q Consensus 211 ----dAWkkLgGMSkEEAmk~YIeLV~el~P~W~~~ 242 (305)
..|+++.|||+.+|+..|++++.+ +|.|...
T Consensus 170 ~~I~~~hk~l~G~s~~eA~~~yL~~a~~-lp~YG~~ 204 (575)
T 2i1j_A 170 QSITNWWQEHRGMLREDAMMEYLKIAQD-LEMYGVN 204 (575)
T ss_dssp HHHHHHHGGGTTCCHHHHHHHHHHHHTT-STTTTCE
T ss_pred HHHHHHHHHccCCCHHHHHHHHHHHHHh-ccccCCE
Confidence 679999999999999999999986 5776654
No 18
>3au4_A Myosin-X; protein-protein complex, motor protein cargo transportation, protein-apoptosis complex; 1.90A {Homo sapiens} PDB: 3au5_A 3pzd_A
Probab=92.14 E-value=0.59 Score=45.92 Aligned_cols=86 Identities=26% Similarity=0.334 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHHhhhhcccccCCCCCCCChHHHHHHHHHhhhhhcCCCCCCC--CCccCh------hh------------
Q 036312 147 LENVFATAVKFVEVSESQSESGKKRDDALSDVHMELYALHKIATEGPCRDPQ--PMPLML------SA------------ 206 (305)
Q Consensus 147 LEe~Fe~Avk~Vk~~~~~~~s~p~~~~ls~D~kL~LYALYKQAT~GdCn~~k--Pg~~D~------vg------------ 206 (305)
+.--|.++..-+- ++. -+.+.++.+.|=||.-|+..||++... +..-.+ ..
T Consensus 321 ~~lly~Q~~~dil-------~G~--~~~~~e~a~~LAAl~lQ~~~GD~~~~~~~~~l~~~lP~~~l~~~~~~~~k~~s~~ 391 (555)
T 3au4_A 321 FAFMFEQAHEAVI-------HGH--HPAPEENLQVLAALRLQYLQGDYTLHAAIPPLEEVYSLQRLKARISQSTKTFSFR 391 (555)
T ss_dssp HHHHHHHHHHHHH-------TTC--SCCCHHHHHHHHHHHHHHHHCSCCTTCCCCCGGGTSCCHHHHHHHHHTTCCEECC
T ss_pred HHhhHHHHHHHHH-------CCC--CCCCHHHHHHHHHHHHHHHcCCCccccchhhhhhhCCHHHhhhhhcccccccccc
Confidence 5567888888776 332 356789999999999999999987632 111010 00
Q ss_pred --------------hHH-------------HHHHHHcCCCCHHHHHHHHHHHHHhhccccccc
Q 036312 207 --------------RSK-------------WNAWQKLGNMNPEEAMERYVALLSDRVPDWKEE 242 (305)
Q Consensus 207 --------------RaK-------------WdAWkkLgGMSkEEAmk~YIeLV~el~P~W~~~ 242 (305)
... ...|+++.|||+.+|+.+|++++.++ |.|...
T Consensus 392 ~~~l~~~~~~~~~~~~~W~~~~~~~~~~~I~~~~~~~~g~s~~eA~~~yL~~~~~l-p~yG~~ 453 (555)
T 3au4_A 392 TGSVVRQKVEEEQMLDMWIKEEVSSARASIIDKWRKFQGMNQEQAMAKYMALIKEW-PGYGST 453 (555)
T ss_dssp TTSCCEECCCCHHHHHHHTHHHHHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHTTS-TTTTCE
T ss_pred ccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhC-CCcCce
Confidence 112 36789999999999999999999876 766543
No 19
>4dxa_B KREV interaction trapped protein 1; GTPase, FERM, protein-protein interaction, GTP binding, CYTO protein binding; HET: GSP; 1.95A {Homo sapiens} PDB: 3u7d_A
Probab=88.00 E-value=0.93 Score=41.49 Aligned_cols=84 Identities=14% Similarity=0.083 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHHhhhhcccccCCCCCCCChHHHHHHHHHhhhhhcCCCCCC--CCCccC---h---------------hh
Q 036312 147 LENVFATAVKFVEVSESQSESGKKRDDALSDVHMELYALHKIATEGPCRDP--QPMPLM---L---------------SA 206 (305)
Q Consensus 147 LEe~Fe~Avk~Vk~~~~~~~s~p~~~~ls~D~kL~LYALYKQAT~GdCn~~--kPg~~D---~---------------vg 206 (305)
+.--|.++..-|- .+. -+.+.++-..|=||--||..||++.. .|+.+. + ..
T Consensus 114 ~~l~y~Q~~~dil-------~G~--~~c~~e~a~~LAAl~~q~e~Gd~~~~~~~~~~l~~~~l~~~lP~~~~~~~~~~~~ 184 (322)
T 4dxa_B 114 ILILFDEARYNLL-------KGF--YTAPDAKLITLASLLLQIVYGNYESKKHKQGFLNEENLKSIVPVTKLKSKAPHWT 184 (322)
T ss_dssp HHHHHHHHHHHHH-------HTC--CCCCHHHHHHHHHHHHHHHHCSCCHHHHSSSCSCHHHHTTTSCTTTTTTTGGGSH
T ss_pred HHHHHHHHHHHHH-------CCc--ccCCHHHHHHHHHHHHHHHhCCCCcccccccccchhhhhhhCCHHHHhcCHHHHH
Confidence 4556778877776 332 35678999999999999999998642 344321 0 01
Q ss_pred hHHHHHHHHc---CCCCHH--HHHHHHHHHHHhhccccc
Q 036312 207 RSKWNAWQKL---GNMNPE--EAMERYVALLSDRVPDWK 240 (305)
Q Consensus 207 RaKWdAWkkL---gGMSkE--EAmk~YIeLV~el~P~W~ 240 (305)
..=..+|+++ .|||++ +|+.+|++++.++ |.|.
T Consensus 185 ~~I~~~h~~~~~~~g~s~~~a~a~~~yL~~~~~l-p~yG 222 (322)
T 4dxa_B 185 NRILHEYKNLSTSEGVSKEMHHLQRMFLQNCWEI-PTYG 222 (322)
T ss_dssp HHHHHHHHHHHC--CCCCCHHHHHHHHHHHHHTS-TTTT
T ss_pred HHHHHHHHhcccccCCChhHHHHHHHHHHHHhcC-CCcC
Confidence 2236789999 999975 4699999998854 5554
No 20
>2al6_A Focal adhesion kinase 1; transferase; 2.35A {Gallus gallus} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 2j0m_A* 2aeh_A
Probab=87.42 E-value=0.82 Score=42.98 Aligned_cols=86 Identities=15% Similarity=0.176 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHHhhhhcccccCCCCCCCChHHHHHHHHHhhhhhcCCCCCCCC----C---------ccCh---------
Q 036312 147 LENVFATAVKFVEVSESQSESGKKRDDALSDVHMELYALHKIATEGPCRDPQP----M---------PLML--------- 204 (305)
Q Consensus 147 LEe~Fe~Avk~Vk~~~~~~~s~p~~~~ls~D~kL~LYALYKQAT~GdCn~~kP----g---------~~D~--------- 204 (305)
+.--|.++..-+- ++. ....+.+.-+.|-||=-|+..||++...+ + .-.+
T Consensus 114 ~~~~y~Q~r~Dil-------~g~-~~~~~~e~al~LAaL~~q~~~gD~~~~~~~~k~~~~~l~k~~~l~~flP~~~~~~~ 185 (375)
T 2al6_A 114 LNFFYQQVKNDYM-------LEI-ADQVDQEIALKLGCLEIRRSYGEMRGNALEKKSNYEVLEKDVGLRRFFPKSLLDSV 185 (375)
T ss_dssp HHHHHHHHHHHHH-------HHT-TTTSCHHHHHHHHHHHHHHHTTTSCTTGGGSHHHHHHHHHTTCGGGTSCHHHHHSS
T ss_pred HHHHHHHHHHHHH-------cCC-CccCCHHHHHHHHHHHHHHHhhhccchhhcccCCHHHhhhcccHHHhCCHHHHHHh
Confidence 4556767665543 111 13468899999999999999999863211 0 0011
Q ss_pred ----hhhHHHHHHHHcCCCCHHHHHHHHHHHHHhhcccccc
Q 036312 205 ----SARSKWNAWQKLGNMNPEEAMERYVALLSDRVPDWKE 241 (305)
Q Consensus 205 ----vgRaKWdAWkkLgGMSkEEAmk~YIeLV~el~P~W~~ 241 (305)
..+.=...|+++.||++++||-+|++++.+ +|.|..
T Consensus 186 ~~~~~~k~I~~~~k~~~g~s~~eAk~~yL~~~~~-l~~yG~ 225 (375)
T 2al6_A 186 KAKTLRKLIQQTFRQFANLNREESILKFFEILSP-VYRFDK 225 (375)
T ss_dssp CHHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHTT-TCCCSC
T ss_pred ChHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHhh-cccCCc
Confidence 111114788999999999999999999998 565543
No 21
>3pvl_A Myosin VIIA isoform 1; protein complex, novel folding, protein cargo binding, cargo proteins, motor protein-protein transport complex; 2.80A {Mus musculus}
Probab=77.37 E-value=6.3 Score=40.26 Aligned_cols=87 Identities=16% Similarity=0.119 Sum_probs=58.5
Q ss_pred HHHHHHHHHHHHhhhhcccccCCCCCCCChH-HHHHHHHHhhhhhcCCCCCCC----------CCc-cCh-hhhHHH---
Q 036312 147 LENVFATAVKFVEVSESQSESGKKRDDALSD-VHMELYALHKIATEGPCRDPQ----------PMP-LML-SARSKW--- 210 (305)
Q Consensus 147 LEe~Fe~Avk~Vk~~~~~~~s~p~~~~ls~D-~kL~LYALYKQAT~GdCn~~k----------Pg~-~D~-vgRaKW--- 210 (305)
+.--|.++..-|- .+. -+.+.+ +...|=||.-||..|+++... |.. +.- ....+|
T Consensus 370 ~~LlYlQ~k~dIl-------~Gr--lpc~~E~~a~~LAAl~~Qae~Gd~~~~~~~~~~L~~~lP~~~l~~~~~~~~w~~~ 440 (655)
T 3pvl_A 370 TNLIYQQVVRGVK-------FGE--YRCEKEDDLAELASQQYFVDYGSEMILERLLSLVPTYIPDREITPLKNLEKWAQL 440 (655)
T ss_dssp HHHHHHHHHHHHH-------HTS--SCCSSHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHSCGGGCCSSSCHHHHHHH
T ss_pred HHHHHHHHhcccc-------cCc--cCCChHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHhCCHHHHhccCCHHHHHHH
Confidence 4456777777665 232 234444 889999999999999986421 211 111 122333
Q ss_pred --HHHHHc----CCCCHHHHHHHHHHHHHhhccccccc
Q 036312 211 --NAWQKL----GNMNPEEAMERYVALLSDRVPDWKEE 242 (305)
Q Consensus 211 --dAWkkL----gGMSkEEAmk~YIeLV~el~P~W~~~ 242 (305)
.+|+++ +|||+.+|+.+|++++.+-+|.|...
T Consensus 441 I~~~hkk~~~~~~g~s~~eAk~~yL~~a~~~lp~YG~~ 478 (655)
T 3pvl_A 441 AIAAHKKGIYAQRRTDSQKVKEDVVNYARFKWPLLFSR 478 (655)
T ss_dssp HHHHHHHHHHTTCSSCHHHHHHHHHHHHHHHCTTTSCE
T ss_pred HHHHHHhhhccccCCCHHHHHHHHHHHHHHhccccCcE
Confidence 678888 89999999999999996566766543
No 22
>4eku_A Protein-tyrosine kinase 2-beta; proline-rich tyrosine kinase 2, FERM domain, transferase; 3.25A {Homo sapiens}
Probab=75.05 E-value=4.3 Score=38.93 Aligned_cols=89 Identities=9% Similarity=0.056 Sum_probs=61.3
Q ss_pred chHHHHHHHHHHHHhhhhcccccCCCCCCCChHHHHHHHHHhhhhhcCCCCCCC----C---------CccC-----hh-
Q 036312 145 SELENVFATAVKFVEVSESQSESGKKRDDALSDVHMELYALHKIATEGPCRDPQ----P---------MPLM-----LS- 205 (305)
Q Consensus 145 seLEe~Fe~Avk~Vk~~~~~~~s~p~~~~ls~D~kL~LYALYKQAT~GdCn~~k----P---------g~~D-----~v- 205 (305)
..++-.|.++..-+- ++ ...+.+.+.-++|-+|--|+-.|+++... . +.-+ +.
T Consensus 132 ~~~~ylY~Q~r~D~l-------~g-~~~~~~~e~al~LAaL~~q~~~gd~~~~a~~~k~~~~~l~k~~~lk~flP~~l~~ 203 (392)
T 4eku_A 132 TTLLYFYQQLRNDYM-------QR-YASKVSEGMALQLGCLELRRFFKDMPHNALDKKSNFELLEKEVGLDLFFPKQMQE 203 (392)
T ss_dssp HHHHHHHHHHHHHHH-------HH-TTTTSCHHHHHHHHHHHHHHHTTTSCTTGGGSHHHHHHHHHHTCGGGTSCHHHHH
T ss_pred HHHHHHHHHHHHHHH-------cC-CCCCCCHHHHHHHHHHHHHHHhhhcchhhhccCCCHHHHhhhccHHHhcCHHHHh
Confidence 346667877776654 11 12357889999999999999999886421 0 1101 11
Q ss_pred -------hhHHHHHHHHcCCCCHHHHHHHHHHHHHhhccccccc
Q 036312 206 -------ARSKWNAWQKLGNMNPEEAMERYVALLSDRVPDWKEE 242 (305)
Q Consensus 206 -------gRaKWdAWkkLgGMSkEEAmk~YIeLV~el~P~W~~~ 242 (305)
.+.=....++++||+..+||-+|+..+.++ |.|...
T Consensus 204 ~ik~k~~rk~I~~~~kk~~~ls~~eakl~YL~~l~~L-p~yG~e 246 (392)
T 4eku_A 204 NLKPKQFRKMIQQTFQQYASLREEECVMKFFNTLAGF-ANIDQE 246 (392)
T ss_dssp HSCHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTS-SCCSCE
T ss_pred hcCHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhh-hccCcE
Confidence 111134778899999999999999999997 887754
No 23
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=34.36 E-value=45 Score=33.19 Aligned_cols=63 Identities=17% Similarity=0.255 Sum_probs=47.2
Q ss_pred CCChHHHHHHHHHhhhhhcCCCCCCC-------------CCccChh-------hhHH------HHHHHHcCCCCHHHHHH
Q 036312 173 DALSDVHMELYALHKIATEGPCRDPQ-------------PMPLMLS-------ARSK------WNAWQKLGNMNPEEAME 226 (305)
Q Consensus 173 ~ls~D~kL~LYALYKQAT~GdCn~~k-------------Pg~~D~v-------gRaK------WdAWkkLgGMSkEEAmk 226 (305)
..+.+.-|.|-+|--|+..||++... -|.-.+. -+.| .+.|+++.++++++||-
T Consensus 132 ~~~~~~al~La~l~~~~~~~d~~~~a~~~~~~~~~~~k~~~~~~fiP~~~~~~~~~~~~~k~i~~~~k~~~~~~~~~~~l 211 (656)
T 2j0j_A 132 QVDQEIALKLGCLEIRRSYGEMRGNALEKKSNYEVLEKDVGLRRFFPKSLLDSVKAKTLRKLIQQTFRQFANLNREESIL 211 (656)
T ss_dssp GSCHHHHHHHHHHHHHHHTTTSCTTGGGSHHHHHHHHHTTTGGGTSCHHHHHHSCHHHHHHHHHHHHGGGTTCCHHHHHH
T ss_pred cccHhHHHHHHHHHHHHHhhhccchhhhcCCCHHHHHhhccHHHhCCHHHHHHhhhhHHHHHHHHHHHHHhcCCHHHHHH
Confidence 36789999999999999999995431 1111110 1222 78889999999999999
Q ss_pred HHHHHHHhh
Q 036312 227 RYVALLSDR 235 (305)
Q Consensus 227 ~YIeLV~el 235 (305)
+|++.+..+
T Consensus 212 k~l~~l~~~ 220 (656)
T 2j0j_A 212 KFFEILSPV 220 (656)
T ss_dssp HHHHHHGGG
T ss_pred HHHHHhccc
Confidence 999998883
No 24
>2fly_A Proadrenomedullin N-20 terminal peptide; alpha helix, hormone/growth factor complex; NMR {Homo sapiens}
Probab=23.84 E-value=29 Score=21.90 Aligned_cols=10 Identities=50% Similarity=1.248 Sum_probs=8.1
Q ss_pred hhhHHHHHHH
Q 036312 205 SARSKWNAWQ 214 (305)
Q Consensus 205 vgRaKWdAWk 214 (305)
.-|.||++|-
T Consensus 8 efrKKwn~w~ 17 (26)
T 2fly_A 8 EFRKKWNKWA 17 (26)
T ss_pred HHHHHHHHHH
Confidence 4588999994
Done!