Your job contains 1 sequence.
>036314
EKVLEIEYIKAVAPQKEEEPSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAGGVCTHIL
EGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKA
SVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAIS
TLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSA
LIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLW
DLRTAWPLSVIDSHKDKVLCADWWRGDSVISGGVDSKLCVSSGVSIQ
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 036314
(347 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2180952 - symbol:AT5G15550 "AT5G15550" species... 1448 2.7e-148 1
ZFIN|ZDB-GENE-030131-371 - symbol:wdr12 "WD repeat domain... 617 3.1e-60 1
UNIPROTKB|Q0VC24 - symbol:WDR12 "Ribosome biogenesis prot... 609 2.2e-59 1
UNIPROTKB|Q9GZL7 - symbol:WDR12 "Ribosome biogenesis prot... 605 5.7e-59 1
UNIPROTKB|F1SHE8 - symbol:WDR12 "Uncharacterized protein"... 605 5.7e-59 1
UNIPROTKB|F1P2Y8 - symbol:WDR12 "Uncharacterized protein"... 604 7.3e-59 1
UNIPROTKB|Q5REE6 - symbol:WDR12 "Ribosome biogenesis prot... 604 7.3e-59 1
MGI|MGI:1927241 - symbol:Wdr12 "WD repeat domain 12" spec... 604 7.3e-59 1
RGD|735072 - symbol:Wdr12 "WD repeat domain 12" species:1... 599 2.5e-58 1
UNIPROTKB|Q5BJ90 - symbol:wdr12 "Ribosome biogenesis prot... 598 3.2e-58 1
UNIPROTKB|E2RNA4 - symbol:WDR12 "Uncharacterized protein"... 590 2.2e-57 1
UNIPROTKB|B5DG67 - symbol:wdr12 "Ribosome biogenesis prot... 585 7.5e-57 1
UNIPROTKB|Q17BB0 - symbol:AAEL005041 "Ribosome biogenesis... 507 1.4e-48 1
UNIPROTKB|B0W517 - symbol:CPIJ001500 "Ribosome biogenesis... 488 1.4e-46 1
UNIPROTKB|B4MU54 - symbol:GK23981 "Ribosome biogenesis pr... 471 9.1e-45 1
UNIPROTKB|Q7QJ33 - symbol:AGAP007244 "Ribosome biogenesis... 464 5.0e-44 1
UNIPROTKB|B4KKN1 - symbol:GI17814 "Ribosome biogenesis pr... 440 1.7e-41 1
DICTYBASE|DDB_G0279903 - symbol:wdr12 "NLE domain-contain... 434 7.5e-41 1
UNIPROTKB|A8QB65 - symbol:Bm1_47965 "Ribosome biogenesis ... 396 8.0e-37 1
UNIPROTKB|B4JPT9 - symbol:GH13339 "Ribosome biogenesis pr... 395 1.0e-36 1
UNIPROTKB|B3N534 - symbol:GG10358 "Ribosome biogenesis pr... 390 3.5e-36 1
UNIPROTKB|B3MJV8 - symbol:GF14067 "Ribosome biogenesis pr... 389 4.4e-36 1
UNIPROTKB|B4P116 - symbol:GE13328 "Ribosome biogenesis pr... 383 1.9e-35 1
FB|FBgn0032298 - symbol:CG6724 species:7227 "Drosophila m... 381 3.1e-35 1
UNIPROTKB|B4Q9T6 - symbol:GD22226 "Ribosome biogenesis pr... 379 5.1e-35 1
UNIPROTKB|B4LS78 - symbol:GJ17641 "Ribosome biogenesis pr... 378 6.5e-35 1
UNIPROTKB|B4HWV6 - symbol:GM11446 "Ribosome biogenesis pr... 378 6.5e-35 1
UNIPROTKB|B4GT01 - symbol:GL26386 "Ribosome biogenesis pr... 376 1.1e-34 1
UNIPROTKB|Q29KQ0 - symbol:GA19813 "Ribosome biogenesis pr... 375 1.3e-34 1
ASPGD|ASPL0000073231 - symbol:AN4469 species:162425 "Emer... 329 1.7e-32 2
CGD|CAL0005315 - symbol:YTM1 species:5476 "Candida albica... 336 1.8e-30 1
UNIPROTKB|Q5APF0 - symbol:YTM1 "Ribosome biogenesis prote... 336 1.8e-30 1
POMBASE|SPAC890.04c - symbol:SPAC890.04c "ribosome biogen... 314 3.9e-28 1
WB|WBGene00018893 - symbol:tag-345 species:6239 "Caenorha... 312 6.4e-28 1
UNIPROTKB|P91343 - symbol:tag-345 "Ribosome biogenesis pr... 312 6.4e-28 1
UNIPROTKB|A8XL02 - symbol:tag-345 "Ribosome biogenesis pr... 306 2.8e-27 1
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 245 2.8e-19 1
DICTYBASE|DDB_G0275045 - symbol:gpbB "Guanine nucleotide-... 157 2.5e-17 2
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 229 4.5e-17 1
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 229 4.5e-17 1
ZFIN|ZDB-GENE-050419-255 - symbol:daw1 "dynein assembly f... 227 8.1e-17 1
UNIPROTKB|H3BPK1 - symbol:KATNB1 "Katanin p80 WD40 repeat... 166 1.4e-16 2
UNIPROTKB|H3BPD8 - symbol:KATNB1 "Katanin p80 WD40 repeat... 161 5.2e-16 2
SGD|S000005798 - symbol:YTM1 "Constituent of 66S pre-ribo... 216 2.6e-15 1
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 138 7.4e-15 2
TAIR|locus:2176085 - symbol:AT5G64730 "AT5G64730" species... 204 8.2e-15 1
RGD|2321145 - symbol:Fbxw7 "F-box and WD repeat domain co... 213 1.0e-14 1
MGI|MGI:1354695 - symbol:Fbxw7 "F-box and WD-40 domain pr... 213 1.2e-14 1
POMBASE|SPAC664.15 - symbol:caf4 "CCR4-Not complex subuni... 212 1.6e-14 1
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 143 1.9e-14 2
UNIPROTKB|F1N9W1 - symbol:FBXW7 "Uncharacterized protein"... 210 2.3e-14 1
UNIPROTKB|F1MNN4 - symbol:FBXW7 "Uncharacterized protein"... 210 2.6e-14 1
ZFIN|ZDB-GENE-090313-79 - symbol:fbxw7 "F-box and WD repe... 211 2.7e-14 1
UNIPROTKB|Q969H0 - symbol:FBXW7 "F-box/WD repeat-containi... 210 3.2e-14 1
UNIPROTKB|E2QUZ3 - symbol:FBXW7 "Uncharacterized protein"... 210 3.3e-14 1
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 206 3.4e-14 1
ASPGD|ASPL0000014385 - symbol:cpcB species:162425 "Emeric... 138 3.5e-14 2
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 211 6.3e-14 1
MGI|MGI:1917485 - symbol:Poc1a "POC1 centriolar protein h... 135 1.1e-13 2
ASPGD|ASPL0000055088 - symbol:AN10058 species:162425 "Eme... 202 1.5e-13 1
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 172 2.3e-13 2
FB|FBgn0041171 - symbol:ago "archipelago" species:7227 "D... 206 2.3e-13 1
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 207 2.7e-13 1
SGD|S000001885 - symbol:CDC4 "F-box protein required for ... 202 3.2e-13 1
POMBASE|SPAC4D7.03 - symbol:pop2 "F-box/WD repeat protein... 199 6.0e-13 1
TAIR|locus:2008159 - symbol:RACK1B_AT "AT1G48630" species... 136 6.0e-13 2
SGD|S000000668 - symbol:RSA4 "WD-repeat protein involved ... 196 7.6e-13 1
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 132 9.0e-13 2
UNIPROTKB|Q2TBP4 - symbol:POC1A "POC1 centriolar protein ... 133 9.9e-13 2
UNIPROTKB|E9PFC6 - symbol:POC1A "POC1 centriolar protein ... 130 1.5e-12 2
TAIR|locus:2092707 - symbol:RACK1C_AT "AT3G18130" species... 131 1.9e-12 2
TAIR|locus:2043929 - symbol:AT2G43770 "AT2G43770" species... 157 1.9e-12 2
ASPGD|ASPL0000005121 - symbol:nudF species:162425 "Emeric... 191 2.1e-12 1
UNIPROTKB|Q00664 - symbol:nudF "Nuclear distribution prot... 191 2.1e-12 1
CGD|CAL0004633 - symbol:orf19.7343 species:5476 "Candida ... 162 2.1e-12 2
UNIPROTKB|Q5A3W6 - symbol:PRP4 "Potential spliceosomal U4... 162 2.1e-12 2
UNIPROTKB|Q8NBT0 - symbol:POC1A "POC1 centriolar protein ... 130 2.2e-12 2
WB|WBGene00004767 - symbol:sel-10 species:6239 "Caenorhab... 191 3.7e-12 1
UNIPROTKB|Q93794 - symbol:sel-10 "F-box/WD repeat-contain... 191 3.7e-12 1
POMBASE|SPCC18.05c - symbol:SPCC18.05c "notchless-like pr... 189 4.6e-12 1
DICTYBASE|DDB_G0279801 - symbol:pex7 "peroxisomal biogene... 157 5.0e-12 2
UNIPROTKB|F1P8S8 - symbol:POC1B "Uncharacterized protein"... 188 5.4e-12 1
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 185 5.8e-12 1
UNIPROTKB|Q8TC44 - symbol:POC1B "POC1 centriolar protein ... 187 7.0e-12 1
POMBASE|SPAC18B11.10 - symbol:tup11 "transcriptional core... 188 8.7e-12 1
FB|FBgn0035922 - symbol:Pex7 "Peroxin 7" species:7227 "Dr... 123 9.4e-12 2
ZFIN|ZDB-GENE-050417-342 - symbol:nsmaf "neutral sphingom... 190 9.4e-12 1
UNIPROTKB|Q5RD06 - symbol:POC1B "POC1 centriolar protein ... 184 1.4e-11 1
UNIPROTKB|G4MQX3 - symbol:MGG_04719 "Guanine nucleotide-b... 117 1.4e-11 2
UNIPROTKB|G4MXN3 - symbol:MGG_01259 "Pre-mRNA splicing fa... 185 1.5e-11 1
UNIPROTKB|A5PKH9 - symbol:WDR51B "Uncharacterized protein... 184 1.6e-11 1
TAIR|locus:2148965 - symbol:TOZ "AT5G16750" species:3702 ... 155 1.8e-11 2
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 178 2.1e-11 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 178 2.9e-11 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 178 2.9e-11 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 178 2.9e-11 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 178 2.9e-11 1
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 178 2.9e-11 1
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 178 2.9e-11 1
RGD|1307285 - symbol:Ciao1 "cytosolic iron-sulfur protein... 133 3.6e-11 2
WARNING: Descriptions of 790 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2180952 [details] [associations]
symbol:AT5G15550 "AT5G15550" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0005730 "nucleolus" evidence=IDA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0005829
"cytosol" evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA]
[GO:0000478 "endonucleolytic cleavage involved in rRNA processing"
evidence=RCA] [GO:0001510 "RNA methylation" evidence=RCA]
[GO:0006606 "protein import into nucleus" evidence=RCA] [GO:0006626
"protein targeting to mitochondrion" evidence=RCA] [GO:0051604
"protein maturation" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009506 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042254 EMBL:AL391143
HSSP:P16649 GO:GO:0080008 InterPro:IPR012972 Pfam:PF08154 KO:K14863
HOGENOM:HOG000264464 OMA:DCTINLW EMBL:AY064011 EMBL:AY091257
IPI:IPI00525355 PIR:T51533 RefSeq:NP_197059.1 UniGene:At.27103
ProteinModelPortal:Q9LF27 SMR:Q9LF27 STRING:Q9LF27 PaxDb:Q9LF27
PRIDE:Q9LF27 EnsemblPlants:AT5G15550.1 GeneID:831408
KEGG:ath:AT5G15550 TAIR:At5g15550 InParanoid:Q9LF27
PhylomeDB:Q9LF27 ProtClustDB:CLSN2687473 ArrayExpress:Q9LF27
Genevestigator:Q9LF27 Uniprot:Q9LF27
Length = 433
Score = 1448 (514.8 bits), Expect = 2.7e-148, P = 2.7e-148
Identities = 255/346 (73%), Positives = 301/346 (86%)
Query: 1 EKVLEIEYIKAVAPQKEEEPSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAGGVCTHIL 60
E+ LEIEYI+AV P+KEEEPSLHDDWVSAV+GS+P FILTGCYD LGRVW + G C+HIL
Sbjct: 87 ERTLEIEYIRAVTPRKEEEPSLHDDWVSAVNGSSPRFILTGCYDGLGRVWSSAGSCSHIL 146
Query: 61 EGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKA 120
EGH GA+SSV ++ S+ + VTVATASKD+TLRL+KFD E V+ K+R++KILRGHKA
Sbjct: 147 EGHSGAISSVALVNSNDAETVTVATASKDRTLRLFKFDPAESVDSTTKVRAYKILRGHKA 206
Query: 121 SVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAIS 180
SV S++A+ SGNMVCS SWDCTI+LW TN+S + G VS+KKRKGNNQ EE Q EGEA++
Sbjct: 207 SVQSVSAQKSGNMVCSSSWDCTINLWNTNESTSEGESVSVKKRKGNNQAEESQSEGEAVT 266
Query: 181 TLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSA 240
+LVGHTQCVSSVVWP+ + IYS+SWDHSVR WDVE GKD ++FCGKALN +D+GGE SA
Sbjct: 267 SLVGHTQCVSSVVWPEHDVIYSSSWDHSVRRWDVETGKDSLNLFCGKALNTVDVGGESSA 326
Query: 241 LIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLW 300
LIAAGGSDPILR+WDPRKPGTSAPVFQFSSH+SWISACKWH SWFHL+SASYDGK+MLW
Sbjct: 327 LIAAGGSDPILRVWDPRKPGTSAPVFQFSSHSSWISACKWHKSSWFHLLSASYDGKIMLW 386
Query: 301 DLRTAWPLSVIDSHKDKVLCADWWRGDSVISGGVDSKLCVSSGVSI 346
DLRTAWPLSVID+H DKVL ADWW+G+SV+SGG DS L +SSG++I
Sbjct: 387 DLRTAWPLSVIDTHNDKVLSADWWKGESVVSGGADSNLRISSGIAI 432
>ZFIN|ZDB-GENE-030131-371 [details] [associations]
symbol:wdr12 "WD repeat domain 12" species:7955
"Danio rerio" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS]
[GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0008283 "cell proliferation" evidence=ISS]
[GO:0030687 "preribosome, large subunit precursor" evidence=ISS]
[GO:0070545 "PeBoW complex" evidence=ISS] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-030131-371 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 HSSP:P16649 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:BC044198 EMBL:BC067331
EMBL:BC155268 IPI:IPI00501657 RefSeq:NP_955851.1 UniGene:Dr.76721
ProteinModelPortal:Q6NX08 STRING:Q6NX08 PRIDE:Q6NX08 DNASU:321652
Ensembl:ENSDART00000012903 GeneID:321652 KEGG:dre:321652
InParanoid:Q6NX08 NextBio:20807472 Bgee:Q6NX08 Uniprot:Q6NX08
Length = 422
Score = 617 (222.3 bits), Expect = 3.1e-60, P = 3.1e-60
Identities = 129/340 (37%), Positives = 186/340 (54%)
Query: 1 EKVLEIEYI-KAVAPQKEEEPSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAGGVCTHI 59
E+V+EIEY+ K APQ EE +HDDW+S+V+ + +ILTG YD R+W G
Sbjct: 78 EEVVEIEYVEKFTAPQPEE-CIMHDDWISSVEADSE-WILTGSYDKTARIWSMEGKAVMT 135
Query: 60 LEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHK 119
+ GH V V +K DGL V + TAS DQT+ LW++++E K+++ RGH
Sbjct: 136 VAGHADVVKDVAWVKRDGLNSVLL-TASLDQTVMLWEWNSER-----NKVKARHCCRGHA 189
Query: 120 ASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAI 179
SV +IA + + CSGSWD + +W ++ + + + E+ L +
Sbjct: 190 GSVDTIAVDPTRTKFCSGSWDKMLKIWSAVPTEEEDEIEEPNRPRKKQKTEQMGLTRTPL 249
Query: 180 STLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGS 239
TL GH + VSSV+W + + SASWDH++R WD E G S + K NCI
Sbjct: 250 MTLSGHNEAVSSVLWMDADELCSASWDHTIRLWDAETGGQKSTLSGSKVFNCISYSPLCR 309
Query: 240 ALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVML 299
L A+G +D +R+WDPR S + +SHN W++A +W L+S S D V L
Sbjct: 310 RL-ASGSTDRHVRLWDPRSKDGSLVLLSLTSHNGWVTAVRWAPSHEHQLVSGSLDNVVKL 368
Query: 300 WDLRTAW-PLSVIDSHKDKVLCADWWRGDSVISGGVDSKL 338
WD R+ PL + +H+DKVLCADW ++SGG D+KL
Sbjct: 369 WDTRSCKAPLYDLAAHEDKVLCADWTENGLILSGGADNKL 408
>UNIPROTKB|Q0VC24 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9913 "Bos taurus" [GO:0000463 "maturation of LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS] [GO:0008283
"cell proliferation" evidence=ISS] [GO:0000466 "maturation of 5.8S
rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
[GO:0005730 "nucleolus" evidence=ISS] [GO:0007219 "Notch signaling
pathway" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
HAMAP:MF_03029 EMBL:BT029892 EMBL:BC120386 EMBL:BC142121
IPI:IPI00725024 RefSeq:NP_001069375.1 UniGene:Bt.42368
ProteinModelPortal:Q0VC24 STRING:Q0VC24 Ensembl:ENSBTAT00000020499
GeneID:528209 KEGG:bta:528209 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 InParanoid:Q0VC24
OrthoDB:EOG4V6ZGM NextBio:20874770 Uniprot:Q0VC24
Length = 423
Score = 609 (219.4 bits), Expect = 2.2e-59, P = 2.2e-59
Identities = 130/341 (38%), Positives = 186/341 (54%)
Query: 1 EKVLEIEYI-KAVAPQKEEEPSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAGGVCTHI 59
E+V+E+EY+ K APQ E+ HDDW+SA++G+ +ILTG YD R+W G
Sbjct: 78 EEVVELEYVEKYTAPQPEQ-CMFHDDWISAIEGTEE-WILTGSYDKTSRIWSLEGKSIMT 135
Query: 60 LEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHK 119
+ GH V V +K D L + ++ AS DQT+ LW+++ E K+++ RGH
Sbjct: 136 IVGHTDVVKDVAWVKKDSLSCLLLS-ASMDQTILLWEWNVER-----NKVKALHCCRGHA 189
Query: 120 ASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGN-QVSIKKRKGNNQVEEPQLEGEA 178
SV SIA +++G CSGSWD + +W T +D + S + + + E+ L
Sbjct: 190 GSVDSIAVDSTGTKFCSGSWDKMLKIWSTVPTDEEDEMEESTNRPRKKQKTEQLGLTRTP 249
Query: 179 ISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEG 238
I TL GH + +SSV+W E I SASWDH+++ WDVE G S + K NCI
Sbjct: 250 IVTLSGHKEAISSVLWSDAEEICSASWDHTIKVWDVESGSLKSTLTGNKVFNCISYSPLC 309
Query: 239 SALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVM 298
L A+G +D +R+WDPR S +SH W+++ KW LIS S D V
Sbjct: 310 KRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNMVK 368
Query: 299 LWDLRTAW-PLSVIDSHKDKVLCADWWRGDSVISGGVDSKL 338
LWD R+ PL + +H+DKVL DW ++SGG D+KL
Sbjct: 369 LWDTRSCKAPLYDLAAHEDKVLSVDWTDSGLLLSGGADNKL 409
>UNIPROTKB|Q9GZL7 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9606 "Homo sapiens" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005654
"nucleoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IC] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0070545 "PeBoW complex" evidence=IDA] [GO:0000463 "maturation
of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0030687 "preribosome, large subunit
precursor" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
HAMAP:MF_03029 CTD:55759 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:AF242546 EMBL:AK001743 EMBL:AK022781 EMBL:AK022782
EMBL:AK056092 EMBL:BC008082 IPI:IPI00304232 RefSeq:NP_060726.3
UniGene:Hs.73291 ProteinModelPortal:Q9GZL7 SMR:Q9GZL7 IntAct:Q9GZL7
STRING:Q9GZL7 PhosphoSite:Q9GZL7 DMDM:20140802 SWISS-2DPAGE:Q9GZL7
PaxDb:Q9GZL7 PeptideAtlas:Q9GZL7 PRIDE:Q9GZL7 DNASU:55759
Ensembl:ENST00000261015 GeneID:55759 KEGG:hsa:55759 UCSC:uc002uzl.3
GeneCards:GC02M203709 HGNC:HGNC:14098 HPA:HPA036389
neXtProt:NX_Q9GZL7 PharmGKB:PA37841 InParanoid:Q9GZL7
PhylomeDB:Q9GZL7 GenomeRNAi:55759 NextBio:60775 ArrayExpress:Q9GZL7
Bgee:Q9GZL7 CleanEx:HS_WDR12 Genevestigator:Q9GZL7
GermOnline:ENSG00000138442 Uniprot:Q9GZL7
Length = 423
Score = 605 (218.0 bits), Expect = 5.7e-59, P = 5.7e-59
Identities = 133/341 (39%), Positives = 184/341 (53%)
Query: 1 EKVLEIEYI-KAVAPQKEEEPSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAGGVCTHI 59
E+V+EIEY+ K APQ E+ HDDW+S++ G+ +ILTG YD R+W G
Sbjct: 78 EEVVEIEYVEKYTAPQPEQ-CMFHDDWISSIKGAEE-WILTGSYDKTSRIWSLEGKSIMT 135
Query: 60 LEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHK 119
+ GH V V +K D L + ++ AS DQT+ LW+++ E K+++ RGH
Sbjct: 136 IVGHTDVVKDVAWVKKDSLSCLLLS-ASMDQTILLWEWNVER-----NKVKALHCCRGHA 189
Query: 120 ASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGN-QVSIKKRKGNNQVEEPQLEGEA 178
SV SIA + SG CSGSWD + +W T +D + S + + + E+ L
Sbjct: 190 GSVDSIAVDGSGTKFCSGSWDKMLKIWSTVPTDEEDEMEESTNRPRKKQKTEQLGLTRTP 249
Query: 179 ISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEG 238
I TL GH + VSSV+W E I SASWDH++R WDVE G S + K NCI
Sbjct: 250 IVTLSGHMEAVSSVLWSDAEEICSASWDHTIRVWDVESGSLKSTLTGNKVFNCISYSPLC 309
Query: 239 SALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVM 298
L A+G +D +R+WDPR S +SH W+++ KW LIS S D V
Sbjct: 310 KRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVK 368
Query: 299 LWDLRTAW-PLSVIDSHKDKVLCADWWRGDSVISGGVDSKL 338
LWD R+ PL + +H+DKVL DW ++SGG D+KL
Sbjct: 369 LWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADNKL 409
>UNIPROTKB|F1SHE8 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070545 "PeBoW complex" evidence=IEA] [GO:0030687
"preribosome, large subunit precursor" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863 OMA:LQTRFFT
GeneTree:ENSGT00640000091456 EMBL:CU469263 RefSeq:XP_003133640.3
Ensembl:ENSSSCT00000017547 GeneID:100512929 KEGG:ssc:100512929
Uniprot:F1SHE8
Length = 423
Score = 605 (218.0 bits), Expect = 5.7e-59, P = 5.7e-59
Identities = 130/341 (38%), Positives = 186/341 (54%)
Query: 1 EKVLEIEYI-KAVAPQKEEEPSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAGGVCTHI 59
E+V+E+EY+ K APQ E+ HDDW+SA++G+ +ILTG YD R+W + G
Sbjct: 78 EEVVELEYVEKYTAPQPEQ-CMFHDDWISAIEGAEE-WILTGSYDKTSRIWSSEGKSIMT 135
Query: 60 LEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHK 119
+ GH V V +K D L + ++ AS DQT+ LW+++ E K+++ RGH
Sbjct: 136 IVGHTDVVKDVAWVKKDSLSCLLLS-ASMDQTILLWEWNVER-----NKVKALHCCRGHA 189
Query: 120 ASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGN-QVSIKKRKGNNQVEEPQLEGEA 178
SV SIA +++G CSGSWD + +W T +D + S + + + E+ L
Sbjct: 190 GSVDSIAVDSTGTRFCSGSWDKMLKIWSTVPTDEEDEMEESTNRPRKKQKTEQLGLTRTP 249
Query: 179 ISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEG 238
I TL GH + +SSV+W E I SASWDH++ WDVE G S + K NCI
Sbjct: 250 IVTLSGHKEAISSVLWSDAEEICSASWDHTIGVWDVESGSLKSTLTGNKVFNCISYSPLC 309
Query: 239 SALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVM 298
L A+G +D +R+WDPR S +SH W+++ KW LIS S D V
Sbjct: 310 KRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVK 368
Query: 299 LWDLRTAW-PLSVIDSHKDKVLCADWWRGDSVISGGVDSKL 338
LWD R+ PL + +H+DKVL DW ++SGG D+KL
Sbjct: 369 LWDTRSCKAPLYDLAAHEDKVLSVDWTNTGLLLSGGADNKL 409
>UNIPROTKB|F1P2Y8 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] [GO:0070545 "PeBoW complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 OMA:LQTRFFT
GeneTree:ENSGT00640000091456 EMBL:AADN02019869 IPI:IPI00587836
Ensembl:ENSGALT00000013803 Uniprot:F1P2Y8
Length = 411
Score = 604 (217.7 bits), Expect = 7.3e-59, P = 7.3e-59
Identities = 128/341 (37%), Positives = 183/341 (53%)
Query: 1 EKVLEIEYI-KAVAPQKEEEPSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAGGVCTHI 59
E+V+EIEY+ K +APQ EE HDDW+S+V + +ILTGCYD R+W G
Sbjct: 66 EEVVEIEYVEKYMAPQPEE-CIFHDDWISSVQATEE-WILTGCYDQTARIWSLEGKSIMT 123
Query: 60 LEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHK 119
+ GH V V +K D L + ++ AS DQT+ LW+++ E+ K+++ RGH
Sbjct: 124 IAGHTEVVKDVAWVKQDSLSCLLIS-ASMDQTILLWEWNVEK-----NKVKALHCCRGHA 177
Query: 120 ASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQ-VEEPQLEGEA 178
SV S+A + + CSGSWD + +W +D R Q E+ L
Sbjct: 178 GSVDSVAVDCTRTKFCSGSWDKMLKIWSAVPTDEEDEMEEAANRPRKKQKTEQLGLTRTP 237
Query: 179 ISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEG 238
++TL GHT+ +SSV+W E I SASWDH+++ WD E G S + K N +
Sbjct: 238 LATLSGHTEAISSVLWSDAEEICSASWDHTIKLWDAETGGLKSTLTGNKVFNSVSYSPLC 297
Query: 239 SALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVM 298
L A+G +D +R+WDPR S + +SH W+++ KW LIS S D V
Sbjct: 298 RRL-ASGSTDRHIRLWDPRSKDGSLVLLSLTSHTGWVTSVKWSPTHEHQLISGSLDNIVK 356
Query: 299 LWDLRTAW-PLSVIDSHKDKVLCADWWRGDSVISGGVDSKL 338
LWD R+ PL + +H+DKVLC DW ++SGG D+KL
Sbjct: 357 LWDTRSCKAPLYDLAAHEDKVLCVDWTEAGLLLSGGADNKL 397
>UNIPROTKB|Q5REE6 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9601 "Pongo abelii" [GO:0000463 "maturation of LSU-rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 HSSP:P16649
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863
HOGENOM:HOG000264464 OMA:LQTRFFT HAMAP:MF_03029 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:CR857583 RefSeq:NP_001124867.1 UniGene:Pab.3253
ProteinModelPortal:Q5REE6 Ensembl:ENSPPYT00000015218
GeneID:100171729 KEGG:pon:100171729 InParanoid:Q5REE6
Uniprot:Q5REE6
Length = 423
Score = 604 (217.7 bits), Expect = 7.3e-59, P = 7.3e-59
Identities = 132/341 (38%), Positives = 184/341 (53%)
Query: 1 EKVLEIEYI-KAVAPQKEEEPSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAGGVCTHI 59
E+V+EIEY+ K APQ E+ HDDW+S++ G+ +ILTG YD R+W G
Sbjct: 78 EEVVEIEYVEKYTAPQPEQ-CMFHDDWISSIKGAEE-WILTGSYDKTSRIWSLEGKSIMT 135
Query: 60 LEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHK 119
+ GH V V +K D L + ++ AS DQT+ LW+++ E K+++ RGH
Sbjct: 136 IVGHTDVVKDVAWVKKDSLSCLLLS-ASMDQTILLWEWNVER-----NKVKALHCCRGHA 189
Query: 120 ASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGN-QVSIKKRKGNNQVEEPQLEGEA 178
SV SIA + SG CSGSWD + +W T +D + S + + + E+ L
Sbjct: 190 GSVDSIAVDGSGTKFCSGSWDKMLKIWSTVPTDEEDEMEESTNRPRKKQKTEQLGLTRTP 249
Query: 179 ISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEG 238
+ TL GH + VSSV+W E I SASWDH++R WDVE G S + K NCI
Sbjct: 250 VVTLSGHMEAVSSVLWSDAEEICSASWDHTIRVWDVESGSLKSTLTGNKVFNCISYSPLC 309
Query: 239 SALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVM 298
L A+G +D +R+WDPR S +SH W+++ KW LIS S D V
Sbjct: 310 KRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVK 368
Query: 299 LWDLRTAW-PLSVIDSHKDKVLCADWWRGDSVISGGVDSKL 338
LWD R+ PL + +H+DKVL DW ++SGG D+KL
Sbjct: 369 LWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADNKL 409
>MGI|MGI:1927241 [details] [associations]
symbol:Wdr12 "WD repeat domain 12" species:10090 "Mus
musculus" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IPI]
[GO:0008283 "cell proliferation" evidence=ISO] [GO:0030687
"preribosome, large subunit precursor" evidence=ISO] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0070545 "PeBoW complex"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1927241 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:AY059431 EMBL:AY059432
EMBL:AF239765 EMBL:AB041608 EMBL:AK007500 EMBL:AK012022
EMBL:AK016611 EMBL:AK031436 EMBL:BC004748 EMBL:BC052386
IPI:IPI00121562 RefSeq:NP_001185989.1 RefSeq:NP_001185990.1
RefSeq:NP_067287.1 UniGene:Mm.281079 ProteinModelPortal:Q9JJA4
SMR:Q9JJA4 STRING:Q9JJA4 PhosphoSite:Q9JJA4 PaxDb:Q9JJA4
PRIDE:Q9JJA4 Ensembl:ENSMUST00000027173 Ensembl:ENSMUST00000117438
Ensembl:ENSMUST00000122038 GeneID:57750 KEGG:mmu:57750
InParanoid:Q9JJA4 NextBio:313896 Bgee:Q9JJA4 CleanEx:MM_WDR12
Genevestigator:Q9JJA4 GermOnline:ENSMUSG00000026019 Uniprot:Q9JJA4
Length = 423
Score = 604 (217.7 bits), Expect = 7.3e-59, P = 7.3e-59
Identities = 131/341 (38%), Positives = 185/341 (54%)
Query: 1 EKVLEIEYI-KAVAPQKEEEPSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAGGVCTHI 59
E+V+E+EY+ K APQ E+ HDDW+S+++G+ +IL+G YD R+W G
Sbjct: 78 EEVVELEYVEKYTAPQPEQ-CMFHDDWISSIEGAEE-WILSGSYDKTSRIWSLEGKSIMT 135
Query: 60 LEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHK 119
+ GH V V +K D L + + TAS DQT+ LW+++ E+ K+++ RGH
Sbjct: 136 IVGHTDVVKDVAWVKKDSLSCLLL-TASMDQTVLLWEWNVEK-----NKVKALHCCRGHA 189
Query: 120 ASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQ-VEEPQLEGEA 178
SV +IA ++SG CSGSWD + +W T +D R Q E+ L
Sbjct: 190 GSVDAIAVDSSGAKFCSGSWDKMLKIWSTVPTDEEDEMEEATNRPRKKQKTEQLGLTRTP 249
Query: 179 ISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEG 238
+ TL GHT+ +SSV+W E I SASWDH++R WDVE G S + K NCI
Sbjct: 250 LVTLSGHTEAISSVLWSDAEEICSASWDHTIRVWDVESGGLKSTLTGNKVFNCISYSPLC 309
Query: 239 SALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVM 298
L A+G +D +R+WDPR S +SH W+++ KW LIS S D V
Sbjct: 310 KRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVK 368
Query: 299 LWDLRTAW-PLSVIDSHKDKVLCADWWRGDSVISGGVDSKL 338
LWD R+ PL + +H+DKVL DW ++SGG D+KL
Sbjct: 369 LWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADNKL 409
>RGD|735072 [details] [associations]
symbol:Wdr12 "WD repeat domain 12" species:10116 "Rattus
norvegicus" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO;ISS]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO;ISS]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005654 "nucleoplasm"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO;ISS]
[GO:0007219 "Notch signaling pathway" evidence=IEA;ISO] [GO:0008283
"cell proliferation" evidence=ISO;ISS] [GO:0030687 "preribosome,
large subunit precursor" evidence=ISO;ISS] [GO:0070545 "PeBoW
complex" evidence=ISO;ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:735072 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:BC063180 IPI:IPI00400751
RefSeq:NP_955442.1 UniGene:Rn.106890 ProteinModelPortal:P61480
STRING:P61480 PRIDE:P61480 Ensembl:ENSRNOT00000023463 GeneID:363237
KEGG:rno:363237 UCSC:RGD:735072 InParanoid:P61480 NextBio:682950
Genevestigator:P61480 GermOnline:ENSRNOG00000017340 Uniprot:P61480
Length = 423
Score = 599 (215.9 bits), Expect = 2.5e-58, P = 2.5e-58
Identities = 129/341 (37%), Positives = 185/341 (54%)
Query: 1 EKVLEIEYI-KAVAPQKEEEPSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAGGVCTHI 59
E+V+E+EY+ K APQ E+ HDDW+S++ G+ +IL+G YD R+W G
Sbjct: 78 EEVVELEYVEKYTAPQPEQ-CMFHDDWISSIKGAEE-WILSGSYDKTSRIWSLEGKSIMT 135
Query: 60 LEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHK 119
+ GH V V +K D L + + TAS DQT+ LW+++ E K+++ RGH
Sbjct: 136 IVGHTDVVKDVAWVKKDSLSCLLL-TASMDQTILLWEWNIER-----NKVKALHCCRGHA 189
Query: 120 ASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGN-QVSIKKRKGNNQVEEPQLEGEA 178
SV +IA ++SG CSGSWD + +W T +D Q + + + E+ L
Sbjct: 190 GSVDAIAVDSSGTKFCSGSWDKMLKIWSTVPTDEEDEIQEPTNRPRKKQKTEQLGLTRTP 249
Query: 179 ISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEG 238
+ TL GHT+ +SSV+W + + SASWDH+VR WDVE G S + K NCI
Sbjct: 250 LVTLSGHTEAISSVLWSDADEVCSASWDHTVRVWDVESGGLKSTLTGNKVFNCISYSPLC 309
Query: 239 SALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVM 298
L A+G +D +R+WDPR S +SH W+++ KW LIS S D V
Sbjct: 310 KRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHDQQLISGSLDNMVK 368
Query: 299 LWDLRTAW-PLSVIDSHKDKVLCADWWRGDSVISGGVDSKL 338
LWD R+ PL + +H+DKVL DW ++SGG D+KL
Sbjct: 369 LWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADNKL 409
>UNIPROTKB|Q5BJ90 [details] [associations]
symbol:wdr12 "Ribosome biogenesis protein wdr12"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000463
"maturation of LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0000466
"maturation of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0005654
"nucleoplasm" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0008283 "cell proliferation" evidence=ISS] [GO:0030687
"preribosome, large subunit precursor" evidence=ISS] [GO:0070545
"PeBoW complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030687 GO:GO:0070545
GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154
KO:K14863 HOGENOM:HOG000264464 HAMAP:MF_03029 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:BC091577 RefSeq:NP_001025628.1 UniGene:Str.36786 HSSP:Q02793
ProteinModelPortal:Q5BJ90 STRING:Q5BJ90 Ensembl:ENSXETT00000047773
GeneID:595016 KEGG:xtr:595016 Xenbase:XB-GENE-945426 OMA:DNSIGFW
Bgee:Q5BJ90 Uniprot:Q5BJ90
Length = 423
Score = 598 (215.6 bits), Expect = 3.2e-58, P = 3.2e-58
Identities = 130/341 (38%), Positives = 185/341 (54%)
Query: 1 EKVLEIEYIKAVAPQKEEEPSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAGGVCTHIL 60
E V+EIEY++ + + EE +HDDWVS++ G+ +ILTG YD R+W G +
Sbjct: 78 EVVVEIEYVEKITAPQPEECMMHDDWVSSIAGTEE-WILTGSYDKTCRIWSLEGKTIMTI 136
Query: 61 EGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKA 120
GH AV V +K D L + ++ AS DQT++LW+++ E KI++ RGH
Sbjct: 137 TGHTEAVKDVTWVKKDSLSCLLLS-ASIDQTIQLWEWNTER-----NKIKALHCCRGHAG 190
Query: 121 SVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGN--QVSIKKRKGNNQVEEPQLEGEA 178
SV SIA + S CSGSWD + +W S+ + S + RK + E+ L
Sbjct: 191 SVDSIAVDASRTKFCSGSWDKMLKIWSAVPSEEEDEYEETSDRPRK-KQKTEKMGLTRIP 249
Query: 179 ISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEG 238
I TL GH++ VSSV+W + I SASWDH+++ WDVE G S + K NCI
Sbjct: 250 IVTLSGHSEAVSSVLWSDVDEICSASWDHNIKIWDVETGTVKSTLAGNKVFNCISYSPLS 309
Query: 239 SALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVM 298
L A+G +D +R+WDPR S + +SH W+++ KW L+S S D V
Sbjct: 310 QRL-ASGSTDRHIRLWDPRSKDGSLVLCSLTSHTGWVTSVKWSPSHEQQLVSGSLDKLVK 368
Query: 299 LWDLRTAW-PLSVIDSHKDKVLCADWWRGDSVISGGVDSKL 338
LWD R+ PL + +H DKVL DW ++SGG D+KL
Sbjct: 369 LWDTRSCKAPLYDLAAHSDKVLSVDWTDAGLILSGGSDNKL 409
>UNIPROTKB|E2RNA4 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070545 "PeBoW complex" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863 OMA:LQTRFFT
CTD:55759 GeneTree:ENSGT00640000091456 EMBL:AAEX03018031
RefSeq:XP_536036.3 Ensembl:ENSCAFT00000019894 GeneID:478876
KEGG:cfa:478876 Uniprot:E2RNA4
Length = 423
Score = 590 (212.7 bits), Expect = 2.2e-57, P = 2.2e-57
Identities = 130/343 (37%), Positives = 186/343 (54%)
Query: 1 EKVLEIEYI-KAVAPQKEEEPSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAGGVCTHI 59
E+V+E+EY+ K APQ E+ HDDW+S+V G+ +ILTG YD R+W G
Sbjct: 78 EEVVELEYVEKYTAPQPEQ-CLFHDDWISSVRGAEE-WILTGSYDKTSRIWSLEGKSIMT 135
Query: 60 LEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHK 119
+ GH V V +K D L + +++ S DQT+ LW+++ E K+++ RGH
Sbjct: 136 IVGHTDVVKDVAWVKKDNLSCLLLSS-SMDQTILLWEWNVER-----NKVKALHCCRGHA 189
Query: 120 ASVHSIAAETSGNMVCSGSWDCTISLWR---TNDSDAAGNQVSIKKRKGNNQVEEPQLEG 176
SV SIA +++G CSGSWD + +W T++ D + ++K + E+ L
Sbjct: 190 GSVDSIAVDSTGTKFCSGSWDKMLKIWSAVPTDEEDELEEPTNRPRKK--QKTEQLGLTR 247
Query: 177 EAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGG 236
I TL GH + +SSV+W E I SASWDH++R WDVE G S + K NCI
Sbjct: 248 TPIVTLSGHKEAISSVLWSDAEEICSASWDHTIRVWDVESGSLKSTLTGNKVFNCISYSP 307
Query: 237 EGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGK 296
L A+G +D +R+WDPR S +SH W+++ KW LIS S D
Sbjct: 308 LCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSLKWSPTHEQQLISGSLDNI 366
Query: 297 VMLWDLRTAW-PLSVIDSHKDKVLCADWWRGDSVISGGVDSKL 338
V LWD R+ PL + +H+DKVL DW ++SGG D+KL
Sbjct: 367 VKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADNKL 409
>UNIPROTKB|B5DG67 [details] [associations]
symbol:wdr12 "Ribosome biogenesis protein wdr12"
species:8030 "Salmo salar" [GO:0000463 "maturation of LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 HAMAP:MF_03029 EMBL:BT043626
ProteinModelPortal:B5DG67 Uniprot:B5DG67
Length = 423
Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
Identities = 124/341 (36%), Positives = 183/341 (53%)
Query: 1 EKVLEIEYIKAVAPQKEEEPSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAGGVCTHIL 60
E V+EIEY++ + EE +HDDW+S+V+ + +ILTG YD ++W G +
Sbjct: 78 EDVVEIEYVERFTAPQPEECMMHDDWISSVEADSE-WILTGSYDKTAKIWSLEGKAVMTV 136
Query: 61 EGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKA 120
GH V V +K DGL + + TAS DQT+ LW++++E K+++ RGH
Sbjct: 137 AGHTDVVKDVAWVKRDGLTSLLL-TASLDQTILLWEWNSER-----NKLKARHCCRGHAG 190
Query: 121 SVHSIAAETSGNMVCSGSWDCTISLWRT--NDSDAAGNQVSIKKRKGNNQVEEPQLEGEA 178
SV +IA + + CSGSWD + +W + + + + RK + E+ L
Sbjct: 191 SVDTIATDPTRTKFCSGSWDKMLKIWSAVATEEEEEEEEPPSRPRK-KQKTEQLGLTRTP 249
Query: 179 ISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEG 238
+ TL GH + VSSV+W E I SASWDH++R WD E G + + K N I
Sbjct: 250 LMTLSGHNEAVSSVLWLDSEEICSASWDHTIRLWDAETGSVKTSLTGSKVFNHISYSPLC 309
Query: 239 SALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVM 298
L A+G +D +R+WDPR S + +SH+ W++A KW L+S S D V
Sbjct: 310 RRL-ASGSTDRHVRLWDPRSKDGSLVLLSLTSHSGWVTAVKWAPSHEHQLVSGSLDNLVK 368
Query: 299 LWDLRTAW-PLSVIDSHKDKVLCADWWRGDSVISGGVDSKL 338
LWD R+ PL + +H+DKVLC DW ++SGG D+KL
Sbjct: 369 LWDTRSCKAPLYDVSAHEDKVLCVDWTDSRLMLSGGADNKL 409
>UNIPROTKB|Q17BB0 [details] [associations]
symbol:AAEL005041 "Ribosome biogenesis protein WDR12
homolog" species:7159 "Aedes aegypti" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972 Pfam:PF08154
KO:K14863 EMBL:CH477324 RefSeq:XP_001650205.1
ProteinModelPortal:Q17BB0 STRING:Q17BB0
EnsemblMetazoa:AAEL005041-RA GeneID:5565845
KEGG:aag:AaeL_AAEL005041 VectorBase:AAEL005041 HOGENOM:HOG000264464
OMA:LQTRFFT OrthoDB:EOG4BNZTB PhylomeDB:Q17BB0 HAMAP:MF_03029
Uniprot:Q17BB0
Length = 427
Score = 507 (183.5 bits), Expect = 1.4e-48, P = 1.4e-48
Identities = 111/349 (31%), Positives = 181/349 (51%)
Query: 1 EKVLEIEYIKAVAPQKEEEPSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAGGVCTHIL 60
E +E+EY++ + ++ LHDDWVSAV+ + +ILTGCYDN +W G +
Sbjct: 88 EDTVELEYVERYPAPEPQDCLLHDDWVSAVEAKD-NWILTGCYDNTLNIWTTKGKHKLTI 146
Query: 61 EGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKA 120
GH V V I D K V A+AS+DQT+ LW+++ + + ++ +GH+
Sbjct: 147 PGHIAPVKGVTWISLDEEKGV-FASASQDQTVMLWEWNVKA-----NSVECVQVCKGHER 200
Query: 121 SVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAIS 180
V IAA S + +GSWD + +W T+ + +Q S KR Q + + +
Sbjct: 201 GVDCIAANRSKTRMATGSWDTMLKIWSTDVRNDGDSQPSTSKR----QKLDTEKARTPVL 256
Query: 181 TLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIG-GEGS 239
TL GH +C+S V W T+ ++SWDH+++ WD+ + S+I CG + D+ +
Sbjct: 257 TLAGHRECISGVQWIDDNTLVTSSWDHTIKIWDLALSGIKSEI-CGHK-SFFDLSYSHLN 314
Query: 240 ALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVML 299
LI A D LR++DP+ + + H W+ + +W + + +S +YD V L
Sbjct: 315 GLIIAASPDKNLRLYDPKSNQGTIVKNTYLGHTQWVQSVRWSTTNEYLFVSGAYDNHVKL 374
Query: 300 WDLRTAW-PLSVIDSHKDKVLCADWWRGDSVISGGVDSKLCV-SSGVSI 346
WD R+ P+ + H+DKVL DW ++SGG D+ + V S ++I
Sbjct: 375 WDYRSPKAPIFELIGHEDKVLACDWSNPKFILSGGSDNSVRVFKSKIAI 423
>UNIPROTKB|B0W517 [details] [associations]
symbol:CPIJ001500 "Ribosome biogenesis protein WDR12
homolog" species:7176 "Culex quinquefasciatus" [GO:0000463
"maturation of LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070545 GO:GO:0000463
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
HAMAP:MF_03029 EMBL:DS231840 RefSeq:XP_001843801.1
UniGene:Cpi.10498 ProteinModelPortal:B0W517 STRING:B0W517
GeneID:6033337 KEGG:cqu:CpipJ_CPIJ001500 VectorBase:CPIJ001500
Uniprot:B0W517
Length = 425
Score = 488 (176.8 bits), Expect = 1.4e-46, P = 1.4e-46
Identities = 108/350 (30%), Positives = 181/350 (51%)
Query: 1 EKVLEIEYIKAVAPQKEEEPSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAGGVCTHIL 60
E +E+EY++ + ++ LHDDWVSAV+ + +ILTGCYDN +W G +
Sbjct: 85 EDTVELEYVERYPAPEPQDCLLHDDWVSAVEARD-NWILTGCYDNTLNLWTTKGKHKLTI 143
Query: 61 EGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKA 120
GH V V I D K V A+AS+DQT+ LW+++ + ++ +GH+
Sbjct: 144 PGHIAPVKGVTWISLDEEKGV-FASASQDQTVMLWEWNVAA-----NSVECVQVCKGHER 197
Query: 121 SVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGN-QVSIKKRKGNNQVEEPQLEGEAI 179
V IAA S + +GSWD + +W T+ G+ + S KR+ ++++ +
Sbjct: 198 GVDCIAANGSKTKMATGSWDTMLKIWSTDVRSGGGDSEPSTSKRQ---KLDQGSAR-TPL 253
Query: 180 STLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIG-GEG 238
TL GH +C+S V W T+ ++SWDH+++ WD+ + S+I K+ D+ +
Sbjct: 254 MTLAGHRECISGVQWIDDNTLVTSSWDHTIKIWDLALNGIKSEISGNKSF--FDLSYSKL 311
Query: 239 SALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVM 298
+ LI D LR++DP+ + + H W+ + +W + + +S +YD V
Sbjct: 312 NGLIITASPDKNLRLYDPKSNQGTLVKNTYLGHTQWVQSVRWSTTNEYLFVSGAYDNHVK 371
Query: 299 LWDLRTAW-PLSVIDSHKDKVLCADWWRGDSVISGGVDSKLCV-SSGVSI 346
LWD R+ P+ + H+DKVL DW ++SGG D+ + V S ++I
Sbjct: 372 LWDYRSPKAPIFELIGHEDKVLACDWSNPRFILSGGSDNSVRVFKSKIAI 421
>UNIPROTKB|B4MU54 [details] [associations]
symbol:GK23981 "Ribosome biogenesis protein WDR12 homolog"
species:7260 "Drosophila willistoni" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972 Pfam:PF08154
EMBL:CH963852 KO:K14863 OMA:LQTRFFT OrthoDB:EOG4BNZTB
HAMAP:MF_03029 RefSeq:XP_002064657.1 ProteinModelPortal:B4MU54
STRING:B4MU54 EnsemblMetazoa:FBtr0254632 GeneID:6641752
KEGG:dwi:Dwil_GK23981 FlyBase:FBgn0225943 InParanoid:B4MU54
Uniprot:B4MU54
Length = 423
Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 111/344 (32%), Positives = 170/344 (49%)
Query: 1 EKVLEIEYIKAVAPQKEEEPSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAGGVCTHIL 60
E +EIEY++ + ++ LHDDWVSAV S +ILTGCYDN +W G HIL
Sbjct: 84 EDAIEIEYVERFPAPQPQDCLLHDDWVSAVKVSGK-WILTGCYDNTLNIWTHKG--KHIL 140
Query: 61 E--GHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGH 118
GH + +V+ I D ++S+DQT+ LW+++ + + I +GH
Sbjct: 141 TIPGHTAPIKAVDWISLDN-DIGRFVSSSQDQTVMLWQWNVDS-----NAVECVSICKGH 194
Query: 119 KASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEA 178
+ V SI+ +GSWD + +W + DA G+ S K+ K N V P
Sbjct: 195 ERGVDSISVSPDATRFATGSWDTMLKVWSAAEDDAGGDAASSKRPKENG-VRTP------ 247
Query: 179 ISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEG 238
I TL GH + +S+V W T+ + SWDH+++ WD+ + ++I K++ D
Sbjct: 248 IMTLQGHRESISAVQWIDTSTLLTTSWDHTMKIWDLSLEGIKTEISTNKSI--FDASYSN 305
Query: 239 -SALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKV 297
+ LI +D LR++DPR S + HN+W+ W F +S +YD +
Sbjct: 306 LNRLIVTASADKNLRLYDPRTNQGSIVRNTYLGHNAWVQTVMWSTTEEFLFVSGAYDNQN 365
Query: 298 MLWDLRTAW-PLSVIDSHKDKVLCADWWRGDSVISGGVDSKLCV 340
LWD R+ PL + H +KVL DW + SGG D+ + V
Sbjct: 366 KLWDCRSPKAPLYDLLGHGEKVLDIDWSNPKYICSGGADNTVRV 409
>UNIPROTKB|Q7QJ33 [details] [associations]
symbol:AGAP007244 "Ribosome biogenesis protein WDR12
homolog" species:7165 "Anopheles gambiae" [GO:0000463 "maturation
of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AAAB01008807 GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_308556.3
ProteinModelPortal:Q7QJ33 STRING:Q7QJ33
EnsemblMetazoa:AGAP007244-RA GeneID:1269902
KEGG:aga:AgaP_AGAP007244 VectorBase:AGAP007244 CTD:1269902
PhylomeDB:Q7QJ33 Uniprot:Q7QJ33
Length = 428
Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 107/342 (31%), Positives = 170/342 (49%)
Query: 1 EKVLEIEYIKAVAPQKEEEPSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAGGVCTHIL 60
E +E+EY++ + ++ LHDDWVSAV + G+ILTG YDN +W G +
Sbjct: 88 EDTIELEYVERYPAPQPQDCLLHDDWVSAVQAKD-GWILTGTYDNTVNLWNTKGKHKLTI 146
Query: 61 EGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKA 120
GH AV V I + V A+AS DQT+ +W+++ N + + + +GH+
Sbjct: 147 PGHVAAVKGVAWISLNEQTGV-FASASHDQTIMIWEWNMT--TNTAECVH---VCKGHER 200
Query: 121 SVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAIS 180
V IA + + SGS D + +W T G + KK K +E+ + +
Sbjct: 201 GVGCIAVNPAKTQMASGSMDTMLKIWSTELQADKGEPSATKKAK----LEQDNVRTPVV- 255
Query: 181 TLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEG-S 239
TL GH + VS V W TI + SWDH+++ WD+ MG + F G + D+ +
Sbjct: 256 TLAGHREFVSGVQWIDNTTIATCSWDHTIKLWDLSMG-GIKTEFTGNK-SFFDLSYSPLN 313
Query: 240 ALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVML 299
+I D LR++DPR + + H+ W+ C+W + + +S +YD +V L
Sbjct: 314 GMIITASPDKNLRLYDPRSKHGNFVKNTYLGHSQWVQTCRWSTTNEYLFVSGAYDNRVKL 373
Query: 300 WDLRTAW-PLSVIDSHKDKVLCADWWRGDSVISGGVDSKLCV 340
WD R+ P+ + H+DKVL DW ++SGG D+ + V
Sbjct: 374 WDYRSPKAPIFELIGHEDKVLACDWSNPKYILSGGSDNAVRV 415
>UNIPROTKB|B4KKN1 [details] [associations]
symbol:GI17814 "Ribosome biogenesis protein WDR12 homolog"
species:7230 "Drosophila mojavensis" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH933807
GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972 Pfam:PF08154
KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_002003253.1
ProteinModelPortal:B4KKN1 EnsemblMetazoa:FBtr0168539 GeneID:6577286
KEGG:dmo:Dmoj_GI17814 FlyBase:FBgn0140555 InParanoid:B4KKN1
Uniprot:B4KKN1
Length = 419
Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 106/351 (30%), Positives = 170/351 (48%)
Query: 1 EKVLEIEYIKAVAPQKEEEPSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAGGVCTHIL 60
E +EIEY++ + ++ LHDDWVSAV S +ILTGCYDN +W G +
Sbjct: 82 EDSIEIEYVERFPAPEPQDCLLHDDWVSAVKASGK-WILTGCYDNTLNIWTYKGKHKLTI 140
Query: 61 EGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKA 120
GH + +V+ I D V+T S+DQT +W+++ + + +GH+
Sbjct: 141 PGHTAPIKAVDWISLDNENGRFVST-SQDQTAMMWQWNIAS-----NAVECVSVCKGHER 194
Query: 121 SVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAIS 180
V S+ +GSWD + +W DA G S KR + V P++
Sbjct: 195 GVDSVCVSPDAQRFATGSWDTMLKIWSAELEDA-GE--STAKRAKESGVRTPRM------ 245
Query: 181 TLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIG-GEGS 239
TL GH + +S+V W T+ + SWDH+++ WD+ + ++I K++ D + +
Sbjct: 246 TLQGHRESISAVQWMDNNTLLTGSWDHTLKVWDLNLEGIKTEISTNKSI--FDASHSKLN 303
Query: 240 ALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVML 299
LI +D LR++D R S + HN+W+ W F +S +YD + L
Sbjct: 304 NLIVTASADKNLRLYDARTNQGSVVRSTYLGHNAWVQTVMWSITEEFLFVSGAYDNQNKL 363
Query: 300 WDLRTAW-PLSVIDSHKDKVLCADWWRGDSVISGGVDSKLCV--SSGVSIQ 347
WD R+ PL + H +KVL DW ++SGG D+ + V SS +++
Sbjct: 364 WDCRSPKAPLYDLLGHGEKVLDIDWSNPKYIVSGGADNTVRVFKSSKATVE 414
>DICTYBASE|DDB_G0279903 [details] [associations]
symbol:wdr12 "NLE domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0042273 "ribosomal large
subunit biogenesis" evidence=ISS] [GO:0005730 "nucleolus"
evidence=IEA;ISS] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0279903 GO:GO:0005654 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042273 GO:GO:0006364
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HAMAP:MF_03029
EMBL:AAFI02000034 RefSeq:XP_641483.1 ProteinModelPortal:Q54W52
STRING:Q54W52 EnsemblProtists:DDB0233985 GeneID:8622282
KEGG:ddi:DDB_G0279903 OMA:DCTINLW Uniprot:Q54W52
Length = 463
Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 115/339 (33%), Positives = 162/339 (47%)
Query: 1 EKVLEIEYIKAVAPQKEEEPSLHDDWVSAVDGSNPGFILTGCYDNLG-RVWKAGGVCTHI 59
E+++ IEY++A+ K E+ HDDWVS VDGSN G +++G YD LG RVW G
Sbjct: 90 EQIITIEYLEAITEPKREKECQHDDWVSCVDGSNFGLVVSGSYD-LGVRVWGYDGELIST 148
Query: 60 LEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHK 119
GH V SV I ++ +AS D+TLR+W F+ + +I++ L+ H
Sbjct: 149 GTGHLAGVKSVCWISDKNADNLSFVSASMDKTLRVWNFNKSQ-----SEIKALACLKEHT 203
Query: 120 ASVHSIAAETSGNMVCSGSWDCTISLWRTND--SDAAGNQVSI-----KKRK----GNNQ 168
++ S+ + + S S D TI LW D + A SI KKR+ NN+
Sbjct: 204 GTIESVYVSPDSSRIVSASMDSTIKLWSIKDIPNQHATTSSSIEKSNSKKRRLANNTNNE 263
Query: 169 VEEPQLEGEAI--------STLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDL 220
+ E I S V ++Q V+ V W Q + S S D +R WDV
Sbjct: 264 TAAVDQQSEIIHNITESLASVTVPNSQGVTVVNWTTQFQMLSGSMDSKIRLWDVSTLVAN 323
Query: 221 SDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPG-TSAPVFQFSSHNSWISACK 279
I L +D E S LI D I+RIWDPR T + SH +W+++
Sbjct: 324 DTIPTPAPLTDLDYSME-SGLIVTAHKDRIVRIWDPRSSDETKSQTQSLISHKTWVTSVN 382
Query: 280 WHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDS-HKDK 317
W+ S +H S S+DG V WD+RT PL ID+ K K
Sbjct: 383 WNPSSKYHCCSTSHDGTVKYWDIRTKIPLYTIDTLEKSK 421
Score = 238 (88.8 bits), Expect = 4.5e-18, P = 4.5e-18
Identities = 62/170 (36%), Positives = 83/170 (48%)
Query: 180 STLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGS 239
S V ++Q V+ V W Q + S S D +R WDV I L +D E S
Sbjct: 283 SVTVPNSQGVTVVNWTTQFQMLSGSMDSKIRLWDVSTLVANDTIPTPAPLTDLDYSME-S 341
Query: 240 ALIAAGGSDPILRIWDPRKPG-TSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVM 298
LI D I+RIWDPR T + SH +W+++ W+ S +H S S+DG V
Sbjct: 342 GLIVTAHKDRIVRIWDPRSSDETKSQTQSLISHKTWVTSVNWNPSSKYHCCSTSHDGTVK 401
Query: 299 LWDLRTAWPLSVIDS---HKDKVLCADWWRGD-------SVISGGVDSKL 338
WD+RT PL ID+ KDKVL + + S++SGG DSKL
Sbjct: 402 YWDIRTKIPLYTIDTLEKSKDKVLSSSFISNKNKNINDYSIVSGGTDSKL 451
>UNIPROTKB|A8QB65 [details] [associations]
symbol:Bm1_47965 "Ribosome biogenesis protein WDR12
homolog" species:6279 "Brugia malayi" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070545
GO:GO:0000463 InterPro:IPR012972 Pfam:PF08154 KO:K14863
HAMAP:MF_03029 EMBL:DS239429 RefSeq:XP_001901055.1
ProteinModelPortal:A8QB65 GeneID:6104478 KEGG:bmy:Bm1_47965
CTD:6104478 Uniprot:A8QB65
Length = 433
Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
Identities = 103/343 (30%), Positives = 162/343 (47%)
Query: 1 EKVLEIEYI-KAVAPQKEEEPSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAGG--VCT 57
E V+ IE I + AP+ + + +L D W+ A+ N FI + Y +W G + +
Sbjct: 93 ESVISIECIVQEPAPEPDSDIALLD-WIGAIR-CNDKFIASATYGGELVLWNHYGKKLTS 150
Query: 58 HILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKK--IRSFKIL 115
+L H A+ + ++ K + T DQ L L D E H I+ +L
Sbjct: 151 SVL--HEEAIKCLALLPDQ--KEDRIVTGGHDQVLML--SDVE---THGSSTFIKPTCVL 201
Query: 116 RGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLE 175
RGH+ SV +IA T G SG +D + +W T+ D + + K + +
Sbjct: 202 RGHERSVEAIAVNTDGTRTVSGGFDKMLKVWNTDKDDTSTVFEKTRSEKTGKKKRTDIIT 261
Query: 176 GEAISTLVGHTQCVSSVVW-PQQ-ETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCID 233
+ TL GH + S VW P + + + SWDH++ WD+E+ ++ + KA I
Sbjct: 262 KIPMVTLSGHKDAIVSAVWSPNSAKEVLTVSWDHTISIWDLELAGQINTLAAKKAFTSIS 321
Query: 234 IGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASY 293
+ LI G DP++R+WDPR + F H WIS+ W+ ISAS+
Sbjct: 322 VCCSSGMLIT-GSVDPVVRLWDPRSHEGTLVKQSFIGHCGWISSVFWNKVKENLFISASF 380
Query: 294 DGKVMLWDLRT-AWPLSVIDSHKDKVLCADWWRGDSVISGGVD 335
D V +WD+R+ PL + H D++LC DW + ++SGGVD
Sbjct: 381 DKTVKMWDVRSNKTPLYDLVGHSDRILCCDWSVNELIVSGGVD 423
>UNIPROTKB|B4JPT9 [details] [associations]
symbol:GH13339 "Ribosome biogenesis protein WDR12 homolog"
species:7222 "Drosophila grimshawi" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH916372 GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972
Pfam:PF08154 KO:K14863 OMA:LQTRFFT OrthoDB:EOG4BNZTB HAMAP:MF_03029
RefSeq:XP_001992994.1 ProteinModelPortal:B4JPT9 STRING:B4JPT9
EnsemblMetazoa:FBtr0148753 GeneID:6566798 KEGG:dgr:Dgri_GH13339
FlyBase:FBgn0120815 InParanoid:B4JPT9 Uniprot:B4JPT9
Length = 419
Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
Identities = 94/307 (30%), Positives = 148/307 (48%)
Query: 37 FILTGCYDNLGRVWKAGGVCTHILE--GHCGAVSSVNIIKSDGLKYVTVATASKDQTLRL 94
+ILTGCYDN +W G HIL GH + +V+ + D + V+T S+DQT L
Sbjct: 117 WILTGCYDNTINIWTNKG--KHILTIPGHTAPIKAVDWLSLDEVNGRFVST-SQDQTAML 173
Query: 95 WKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAA 154
W+++ + + + +GH+ SV S+A +GSWD + LW DA
Sbjct: 174 WQWNIDS-----NAVDCVSVCKGHERSVDSVAVSPDAQRFATGSWDTMLKLWSAELEDAV 228
Query: 155 GNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDV 214
K G V P++ TL GH + +S+V W T+ + SWDH+++ WD+
Sbjct: 229 EGSAKRAKESG---VRTPKM------TLQGHRESISAVQWMDGTTLLTGSWDHTLKVWDL 279
Query: 215 EMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSW 274
+ ++I K++ + + + LI +D LR++DPR S + HN+W
Sbjct: 280 NLEGIKTEISTNKSIFDANFS-KLNRLIVTASADKNLRLYDPRTNQGSVVRNTYLGHNAW 338
Query: 275 ISACKWHNKSWFHLISASYDGKVMLWDLRTAW-PLSVIDSHKDKVLCADWWRGDSVISGG 333
+ W F +S SYD + LWD R+ PL + H +KVL DW ++SGG
Sbjct: 339 VQTVMWSTTEEFLFVSGSYDNQNKLWDCRSPKAPLYDLLGHGEKVLDIDWSNPKYIVSGG 398
Query: 334 VDSKLCV 340
D+ + V
Sbjct: 399 ADNTVRV 405
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 74/231 (32%), Positives = 116/231 (50%)
Query: 1 EKVLEIEYIKAVAPQKEEEPSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAGGVCTHIL 60
E +EIEY++ + ++ LHDDWVSAV S +ILTGCYDN +W G HIL
Sbjct: 82 EDAIEIEYVERFPAPEPQDCLLHDDWVSAVKASGK-WILTGCYDNTINIWTNKG--KHIL 138
Query: 61 E--GHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGH 118
GH + +V+ + D + V+T S+DQT LW+++ + + + +GH
Sbjct: 139 TIPGHTAPIKAVDWLSLDEVNGRFVST-SQDQTAMLWQWNIDS-----NAVDCVSVCKGH 192
Query: 119 KASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEA 178
+ SV S+A +GSWD + LW DA K G V P++
Sbjct: 193 ERSVDSVAVSPDAQRFATGSWDTMLKLWSAELEDAVEGSAKRAKESG---VRTPKM---- 245
Query: 179 ISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKAL 229
TL GH + +S+V W T+ + SWDH+++ WD+ + ++I K++
Sbjct: 246 --TLQGHRESISAVQWMDGTTLLTGSWDHTLKVWDLNLEGIKTEISTNKSI 294
>UNIPROTKB|B3N534 [details] [associations]
symbol:GG10358 "Ribosome biogenesis protein WDR12 homolog"
species:7220 "Drosophila erecta" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH954177
GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972 Pfam:PF08154
KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_001969920.1
ProteinModelPortal:B3N534 EnsemblMetazoa:FBtr0130412 GeneID:6542886
KEGG:der:Dere_GG10358 FlyBase:FBgn0102667 Uniprot:B3N534
Length = 420
Score = 390 (142.3 bits), Expect = 3.5e-36, P = 3.5e-36
Identities = 95/308 (30%), Positives = 149/308 (48%)
Query: 37 FILTGCYDNLGRVWKAGGVCTHIL--EGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRL 94
+IL+GCYDN +W G HIL GH + +V+ I D V+T S+DQT L
Sbjct: 118 WILSGCYDNTLNLWTNKG--KHILTISGHTAPIKAVDWISLDEETGRFVST-SQDQTAML 174
Query: 95 WKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAA 154
W+++ + + +GH+ V S++ G +GSWD + +W DAA
Sbjct: 175 WQWNVGS-----NSVECVSVCKGHERGVDSVSVSPDGLRFATGSWDTMLKVWSAEQEDAA 229
Query: 155 GNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDV 214
KR + V P++ TL GH + VS+V W T+ + SWDH+++ WD+
Sbjct: 230 EGS---SKRMKESGVRTPKI------TLQGHRESVSAVQWMDASTLLTGSWDHTLKVWDL 280
Query: 215 EMGKDLSDIFCGKALNCIDIG-GEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNS 273
+ ++I K++ D + + LI +D LR++DPR S + HN+
Sbjct: 281 SLEGIKTEISTNKSI--FDASYSKLNRLILTASADKNLRLYDPRTNQGSVVRNTYLGHNA 338
Query: 274 WISACKWHNKSWFHLISASYDGKVMLWDLRTAW-PLSVIDSHKDKVLCADWWRGDSVISG 332
W+ W F +S +YD + LWD R+ PL + H +KVL DW ++SG
Sbjct: 339 WVQTVMWSTTEEFLFVSGAYDNQNKLWDCRSPKAPLYDLLGHGEKVLDIDWSNPKYIVSG 398
Query: 333 GVDSKLCV 340
GVD+ + V
Sbjct: 399 GVDNTVRV 406
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 74/231 (32%), Positives = 116/231 (50%)
Query: 1 EKVLEIEYIKAVAPQKEEEPSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAGGVCTHIL 60
E +EIEY++ + ++ LHDDWVSAV S +IL+GCYDN +W G HIL
Sbjct: 83 EDAIEIEYVERFPAPEPQDCLLHDDWVSAVKASGK-WILSGCYDNTLNLWTNKG--KHIL 139
Query: 61 --EGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGH 118
GH + +V+ I D V+T S+DQT LW+++ + + +GH
Sbjct: 140 TISGHTAPIKAVDWISLDEETGRFVST-SQDQTAMLWQWNVGS-----NSVECVSVCKGH 193
Query: 119 KASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEA 178
+ V S++ G +GSWD + +W DAA KR + V P++
Sbjct: 194 ERGVDSVSVSPDGLRFATGSWDTMLKVWSAEQEDAAEGS---SKRMKESGVRTPKI---- 246
Query: 179 ISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKAL 229
TL GH + VS+V W T+ + SWDH+++ WD+ + ++I K++
Sbjct: 247 --TLQGHRESVSAVQWMDASTLLTGSWDHTLKVWDLSLEGIKTEISTNKSI 295
>UNIPROTKB|B3MJV8 [details] [associations]
symbol:GF14067 "Ribosome biogenesis protein WDR12 homolog"
species:7217 "Drosophila ananassae" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH902620 GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972
Pfam:PF08154 KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029
RefSeq:XP_001963192.1 ProteinModelPortal:B3MJV8 STRING:B3MJV8
EnsemblMetazoa:FBtr0118767 GeneID:6496895 KEGG:dan:Dana_GF14067
FlyBase:FBgn0091094 InParanoid:B3MJV8 Uniprot:B3MJV8
Length = 419
Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
Identities = 99/331 (29%), Positives = 159/331 (48%)
Query: 14 PQKEEEPSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAGGVCTHIL--EGHCGAVSSVN 71
P E + L D + +N +ILTGCYDN +W G HIL GH + +V+
Sbjct: 94 PAPEPQDCLLHDDWVSAVKANGKWILTGCYDNTLNIWTNKG--KHILTISGHTAPIKAVD 151
Query: 72 IIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSG 131
I D + ++S+DQT LW+++ N + + + +GH+ V S++ G
Sbjct: 152 WISLDE-ESGRFVSSSQDQTAMLWQWNVGS--NTAECV---SVCKGHERGVDSVSVSPDG 205
Query: 132 NMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSS 191
+GSWD + +W + D AG S KR + V P++ TL GH + +S+
Sbjct: 206 QRFATGSWDTMLKVWSA-ELDDAGEGTS--KRMKESGVRTPKM------TLQGHRESISA 256
Query: 192 VVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEG-SALIAAGGSDPI 250
V W T+ + SWDH+++ WD+ + ++I K++ D + LI +D
Sbjct: 257 VQWMDASTLLTGSWDHTLKVWDLSLEGIKTEISTNKSI--FDASYSNLNRLIVTASADKN 314
Query: 251 LRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAW-PLS 309
LR++D R S + HN+W+ A W F +S +YD + LWD R+ PL
Sbjct: 315 LRLYDARTNQGSVVRNTYLGHNAWVQAVMWSTTEEFLFVSGAYDNQNKLWDCRSPKAPLY 374
Query: 310 VIDSHKDKVLCADWWRGDSVISGGVDSKLCV 340
+ H +KVL DW ++SGG D+ + V
Sbjct: 375 DLLGHGEKVLDIDWTNPKYIVSGGADNSVRV 405
Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 74/231 (32%), Positives = 121/231 (52%)
Query: 1 EKVLEIEYIKAVAPQKEEEPSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAGGVCTHIL 60
E +EIEY++ + ++ LHDDWVSAV +N +ILTGCYDN +W G HIL
Sbjct: 82 EDAIEIEYVERFPAPEPQDCLLHDDWVSAVK-ANGKWILTGCYDNTLNIWTNKG--KHIL 138
Query: 61 --EGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGH 118
GH + +V+ I D + ++S+DQT LW+++ N + + + +GH
Sbjct: 139 TISGHTAPIKAVDWISLDE-ESGRFVSSSQDQTAMLWQWNVGS--NTAECV---SVCKGH 192
Query: 119 KASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEA 178
+ V S++ G +GSWD + +W + D AG S KR + V P++
Sbjct: 193 ERGVDSVSVSPDGQRFATGSWDTMLKVWSA-ELDDAGEGTS--KRMKESGVRTPKM---- 245
Query: 179 ISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKAL 229
TL GH + +S+V W T+ + SWDH+++ WD+ + ++I K++
Sbjct: 246 --TLQGHRESISAVQWMDASTLLTGSWDHTLKVWDLSLEGIKTEISTNKSI 294
>UNIPROTKB|B4P116 [details] [associations]
symbol:GE13328 "Ribosome biogenesis protein WDR12 homolog"
species:7245 "Drosophila yakuba" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CM000157 GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972
Pfam:PF08154 KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029
EMBL:AY231921 RefSeq:XP_002088279.1 ProteinModelPortal:B4P116
STRING:B4P116 EnsemblMetazoa:FBtr0259846 GeneID:6527185
KEGG:dya:Dyak_GE13328 FlyBase:FBgn0068268 Uniprot:B4P116
Length = 420
Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
Identities = 94/308 (30%), Positives = 148/308 (48%)
Query: 37 FILTGCYDNLGRVWKAGGVCTHIL--EGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRL 94
+IL+GCYDN +W G HIL GH + +V+ I D V+T S+DQT L
Sbjct: 118 WILSGCYDNTLNLWTNKG--KHILTISGHTAPIKAVDWISLDEETGRFVST-SQDQTAML 174
Query: 95 WKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAA 154
W+++ + + +GH+ V S++ G +GSWD + +W DA
Sbjct: 175 WQWNVGS-----NSVECVSVCKGHERGVDSVSVSPDGLRFATGSWDTMLKVWSAEVEDAV 229
Query: 155 GNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDV 214
KR + V P++ TL GH + VS+V W T+ + SWDH+++ WD+
Sbjct: 230 EGS---SKRMKESGVRTPKI------TLQGHRESVSAVQWMDASTLLTGSWDHTLKVWDL 280
Query: 215 EMGKDLSDIFCGKALNCIDIG-GEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNS 273
+ ++I K++ D + + LI +D LR++DPR S + HN+
Sbjct: 281 SLEGIKTEISTNKSI--FDASYSKLNRLILTASADKNLRLYDPRTNQGSVVRNTYLGHNA 338
Query: 274 WISACKWHNKSWFHLISASYDGKVMLWDLRTAW-PLSVIDSHKDKVLCADWWRGDSVISG 332
W+ W F +S +YD + LWD R+ PL + H +KVL DW ++SG
Sbjct: 339 WVQTVMWSTTEEFLFVSGAYDNQNKLWDCRSPKAPLYDLLGHGEKVLDIDWSNPKYIVSG 398
Query: 333 GVDSKLCV 340
GVD+ + V
Sbjct: 399 GVDNTVRV 406
Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 73/231 (31%), Positives = 115/231 (49%)
Query: 1 EKVLEIEYIKAVAPQKEEEPSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAGGVCTHIL 60
E +EIEY++ + ++ LHDDWVSAV S +IL+GCYDN +W G HIL
Sbjct: 83 EDAIEIEYVERFPAPEPQDCLLHDDWVSAVKASGK-WILSGCYDNTLNLWTNKG--KHIL 139
Query: 61 --EGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGH 118
GH + +V+ I D V+T S+DQT LW+++ + + +GH
Sbjct: 140 TISGHTAPIKAVDWISLDEETGRFVST-SQDQTAMLWQWNVGS-----NSVECVSVCKGH 193
Query: 119 KASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEA 178
+ V S++ G +GSWD + +W DA KR + V P++
Sbjct: 194 ERGVDSVSVSPDGLRFATGSWDTMLKVWSAEVEDAVEGS---SKRMKESGVRTPKI---- 246
Query: 179 ISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKAL 229
TL GH + VS+V W T+ + SWDH+++ WD+ + ++I K++
Sbjct: 247 --TLQGHRESVSAVQWMDASTLLTGSWDHTLKVWDLSLEGIKTEISTNKSI 295
>FB|FBgn0032298 [details] [associations]
symbol:CG6724 species:7227 "Drosophila melanogaster"
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005654 EMBL:AE014134
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0070545 GO:GO:0000463 HSSP:P63005 InterPro:IPR012972
Pfam:PF08154 KO:K14863 OMA:LQTRFFT OrthoDB:EOG4BNZTB HAMAP:MF_03029
GeneTree:ENSGT00640000091456 EMBL:AY118871 RefSeq:NP_609452.1
UniGene:Dm.37812 ProteinModelPortal:Q9VKQ3 SMR:Q9VKQ3 IntAct:Q9VKQ3
MINT:MINT-818926 STRING:Q9VKQ3 PaxDb:Q9VKQ3 PRIDE:Q9VKQ3
EnsemblMetazoa:FBtr0080191 GeneID:34488 KEGG:dme:Dmel_CG6724
UCSC:CG6724-RA FlyBase:FBgn0032298 InParanoid:Q9VKQ3
PhylomeDB:Q9VKQ3 GenomeRNAi:34488 NextBio:788731 Bgee:Q9VKQ3
Uniprot:Q9VKQ3
Length = 420
Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 94/308 (30%), Positives = 148/308 (48%)
Query: 37 FILTGCYDNLGRVWKAGGVCTHIL--EGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRL 94
+IL+GCYDN +W G HIL GH + +V+ I D V+T S+DQT L
Sbjct: 118 WILSGCYDNTLNLWTNKG--KHILTISGHTAPIKAVDWISLDEETGRFVST-SQDQTAML 174
Query: 95 WKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAA 154
W+++ + + +GH+ V S++ G +GSWD + +W DA
Sbjct: 175 WQWNVGS-----NSVECVSVCKGHERGVDSVSVSPDGLRFATGSWDTMLKVWSAELDDAV 229
Query: 155 GNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDV 214
KR + V P++ TL GH + VS+V W T+ + SWDH+++ WD+
Sbjct: 230 EGS---SKRMKESGVRTPKI------TLQGHRESVSAVQWMDATTLLTGSWDHTLKVWDL 280
Query: 215 EMGKDLSDIFCGKALNCIDIG-GEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNS 273
+ ++I K++ D + + LI +D LR++DPR S + HN+
Sbjct: 281 SLEGIKTEISTNKSI--FDASYSKLNRLILTASADKNLRLYDPRTNQGSVVRNTYLGHNA 338
Query: 274 WISACKWHNKSWFHLISASYDGKVMLWDLRTAW-PLSVIDSHKDKVLCADWWRGDSVISG 332
W+ W F +S +YD + LWD R+ PL + H +KVL DW ++SG
Sbjct: 339 WVQTVMWSTTEEFLFVSGAYDNQNKLWDCRSPKAPLYDLLGHGEKVLDIDWSNPKYIVSG 398
Query: 333 GVDSKLCV 340
GVD+ + V
Sbjct: 399 GVDNTVRV 406
Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
Identities = 72/231 (31%), Positives = 114/231 (49%)
Query: 1 EKVLEIEYIKAVAPQKEEEPSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAGGVCTHIL 60
E +EIEY++ + ++ LHDDWVSAV +IL+GCYDN +W G HIL
Sbjct: 83 EDAIEIEYVERFPAPEPQDCLLHDDWVSAVKARGK-WILSGCYDNTLNLWTNKG--KHIL 139
Query: 61 --EGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGH 118
GH + +V+ I D V+T S+DQT LW+++ + + +GH
Sbjct: 140 TISGHTAPIKAVDWISLDEETGRFVST-SQDQTAMLWQWNVGS-----NSVECVSVCKGH 193
Query: 119 KASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEA 178
+ V S++ G +GSWD + +W DA KR + V P++
Sbjct: 194 ERGVDSVSVSPDGLRFATGSWDTMLKVWSAELDDAVEGS---SKRMKESGVRTPKI---- 246
Query: 179 ISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKAL 229
TL GH + VS+V W T+ + SWDH+++ WD+ + ++I K++
Sbjct: 247 --TLQGHRESVSAVQWMDATTLLTGSWDHTLKVWDLSLEGIKTEISTNKSI 295
>UNIPROTKB|B4Q9T6 [details] [associations]
symbol:GD22226 "Ribosome biogenesis protein WDR12 homolog"
species:7240 "Drosophila simulans" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070545
GO:GO:0000463 EMBL:CM000361 InterPro:IPR012972 Pfam:PF08154
KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_002079018.1
ProteinModelPortal:B4Q9T6 EnsemblMetazoa:FBtr0222136 GeneID:6731883
KEGG:dsi:Dsim_GD22226 FlyBase:FBgn0193635 Uniprot:B4Q9T6
Length = 420
Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
Identities = 96/308 (31%), Positives = 151/308 (49%)
Query: 37 FILTGCYDNLGRVWKAGGVCTHIL--EGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRL 94
+IL+GCYDN +W G HIL GH + +V+ I D V+T S+DQT L
Sbjct: 118 WILSGCYDNSLNLWTNKG--KHILTISGHTAPIKAVDWISLDEETGRFVST-SQDQTAML 174
Query: 95 WKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAA 154
WK++ + + +GH+ V S++ G +GSWD + +W D
Sbjct: 175 WKWNVGS-----NAVDCVSVCKGHERGVDSVSVSPDGLRFATGSWDTMLKVWSAELDD-- 227
Query: 155 GNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDV 214
G + S K+ K + V P++ TL GH + VS+V W T+ + SWD++++ WD+
Sbjct: 228 GVEGSSKRMKESG-VRTPKI------TLQGHRESVSAVQWMDATTLLTGSWDYTLKVWDL 280
Query: 215 EMGKDLSDIFCGKALNCIDIG-GEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNS 273
+ ++I K++ D + + LI +D LR++DPR S + HN+
Sbjct: 281 SLEGIKTEISTNKSI--FDASYSKLNRLILTASADKNLRLYDPRTNQGSVVRNTYLGHNA 338
Query: 274 WISACKWHNKSWFHLISASYDGKVMLWDLRTAW-PLSVIDSHKDKVLCADWWRGDSVISG 332
W+ W F +S +YD + LWD R+ PL + H DKVL DW ++SG
Sbjct: 339 WVQTVMWSTTEEFLFVSGAYDNQNKLWDCRSPKAPLYDLLGHGDKVLDIDWSNPKYIVSG 398
Query: 333 GVDSKLCV 340
GVD+ + V
Sbjct: 399 GVDNSVRV 406
Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 73/231 (31%), Positives = 117/231 (50%)
Query: 1 EKVLEIEYIKAVAPQKEEEPSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAGGVCTHIL 60
E +EIEY++ + ++ LHDDWVSAV +IL+GCYDN +W G HIL
Sbjct: 83 EDAIEIEYVERFPAPEPQDCLLHDDWVSAVKARGK-WILSGCYDNSLNLWTNKG--KHIL 139
Query: 61 --EGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGH 118
GH + +V+ I D V+T S+DQT LWK++ + + +GH
Sbjct: 140 TISGHTAPIKAVDWISLDEETGRFVST-SQDQTAMLWKWNVGS-----NAVDCVSVCKGH 193
Query: 119 KASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEA 178
+ V S++ G +GSWD + +W D G + S K+ K + V P++
Sbjct: 194 ERGVDSVSVSPDGLRFATGSWDTMLKVWSAELDD--GVEGSSKRMKESG-VRTPKI---- 246
Query: 179 ISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKAL 229
TL GH + VS+V W T+ + SWD++++ WD+ + ++I K++
Sbjct: 247 --TLQGHRESVSAVQWMDATTLLTGSWDYTLKVWDLSLEGIKTEISTNKSI 295
>UNIPROTKB|B4LS78 [details] [associations]
symbol:GJ17641 "Ribosome biogenesis protein WDR12 homolog"
species:7244 "Drosophila virilis" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH940649 GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972
Pfam:PF08154 KO:K14863 OMA:LQTRFFT OrthoDB:EOG4BNZTB HAMAP:MF_03029
RefSeq:XP_002052609.1 ProteinModelPortal:B4LS78 STRING:B4LS78
EnsemblMetazoa:FBtr0233566 GeneID:6629233 KEGG:dvi:Dvir_GJ17641
FlyBase:FBgn0204810 InParanoid:B4LS78 Uniprot:B4LS78
Length = 419
Score = 378 (138.1 bits), Expect = 6.5e-35, P = 6.5e-35
Identities = 91/310 (29%), Positives = 145/310 (46%)
Query: 37 FILTGCYDNLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWK 96
+ILTGCYDN +W G + GH + +V+ I D V+T S+DQT LW+
Sbjct: 117 WILTGCYDNTINIWTNKGKHKLTIPGHTAPIKAVDWISMDDENGRFVST-SQDQTAMLWQ 175
Query: 97 FDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGN 156
++ + + +GH+ V S+ +GSWD + +W D +
Sbjct: 176 WNIAS-----NAVECVSVCKGHERGVDSVCVSPDAQRFATGSWDTMLKIWSAGLDDTSEG 230
Query: 157 QVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEM 216
K G V P++ TL GH + +S+V W T+ + SWDH+++ WD+++
Sbjct: 231 TAKRVKESG---VRTPKM------TLQGHRESISAVQWMDATTLVTGSWDHTLKVWDLQL 281
Query: 217 GKDLSDIFCGKALNCIDIG-GEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWI 275
++I K++ D + + LI +D LR++D R S + HN+W+
Sbjct: 282 EGIKTEISTNKSI--FDASYSKLNRLIVTASADKNLRLYDARTNQGSVVRNTYLGHNAWV 339
Query: 276 SACKWHNKSWFHLISASYDGKVMLWDLRTAW-PLSVIDSHKDKVLCADWWRGDSVISGGV 334
W N F +S SYD + LWD R+ PL + H +KVL DW ++SGG
Sbjct: 340 QTVMWSNTEEFLFVSGSYDTQNKLWDCRSPKAPLYDLLGHGEKVLDIDWSNPKYIVSGGA 399
Query: 335 DSKLCV-SSG 343
D+ + V SG
Sbjct: 400 DNTVRVFKSG 409
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 66/229 (28%), Positives = 110/229 (48%)
Query: 1 EKVLEIEYIKAVAPQKEEEPSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAGGVCTHIL 60
E ++IEY++ + ++ LHDDWVSAV +ILTGCYDN +W G +
Sbjct: 82 EDAIDIEYVERFPAPEPQDCLLHDDWVSAVKACGK-WILTGCYDNTINIWTNKGKHKLTI 140
Query: 61 EGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKA 120
GH + +V+ I D V+T S+DQT LW+++ + + +GH+
Sbjct: 141 PGHTAPIKAVDWISMDDENGRFVST-SQDQTAMLWQWNIAS-----NAVECVSVCKGHER 194
Query: 121 SVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAIS 180
V S+ +GSWD + +W D + K G V P++
Sbjct: 195 GVDSVCVSPDAQRFATGSWDTMLKIWSAGLDDTSEGTAKRVKESG---VRTPKM------ 245
Query: 181 TLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKAL 229
TL GH + +S+V W T+ + SWDH+++ WD+++ ++I K++
Sbjct: 246 TLQGHRESISAVQWMDATTLVTGSWDHTLKVWDLQLEGIKTEISTNKSI 294
>UNIPROTKB|B4HWV6 [details] [associations]
symbol:GM11446 "Ribosome biogenesis protein WDR12 homolog"
species:7238 "Drosophila sechellia" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070545
GO:GO:0000463 EMBL:CH480818 InterPro:IPR012972 Pfam:PF08154
KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_002036578.1
ProteinModelPortal:B4HWV6 EnsemblMetazoa:FBtr0194431 GeneID:6612061
KEGG:dse:Dsec_GM11446 FlyBase:FBgn0166389 Uniprot:B4HWV6
Length = 420
Score = 378 (138.1 bits), Expect = 6.5e-35, P = 6.5e-35
Identities = 96/308 (31%), Positives = 151/308 (49%)
Query: 37 FILTGCYDNLGRVWKAGGVCTHIL--EGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRL 94
+IL+GCYDN +W G HIL GH + +V+ I D V+T S+DQT L
Sbjct: 118 WILSGCYDNSLNLWTNKG--KHILTISGHTAPIKAVDWISLDEETGRFVST-SQDQTAML 174
Query: 95 WKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAA 154
WK++ + + +GH+ V S++ G +GSWD + +W D
Sbjct: 175 WKWNVGS-----NAVDCVSVCKGHERGVDSVSVSPDGLRFATGSWDTMLKVWSAELDD-- 227
Query: 155 GNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDV 214
G + S K+ K + V P++ TL GH + VS+V W T+ + SWD++++ WD+
Sbjct: 228 GVEGSSKRMKESG-VRTPKI------TLQGHRESVSAVQWMDATTLLTGSWDYTLKVWDL 280
Query: 215 EMGKDLSDIFCGKALNCIDIG-GEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNS 273
+ ++I K++ D + + LI +D LR++DPR S + HN+
Sbjct: 281 SLEGIKTEISTNKSI--FDASYSKLNRLILTASADKNLRLYDPRTNQGSVVRNTYLGHNA 338
Query: 274 WISACKWHNKSWFHLISASYDGKVMLWDLRTAW-PLSVIDSHKDKVLCADWWRGDSVISG 332
W+ W F +S +YD + LWD R+ PL + H DKVL DW ++SG
Sbjct: 339 WVQTVMWSTTEEFLFVSGAYDNQNKLWDCRSPKAPLYDLLGHGDKVLDIDWSNPKYIVSG 398
Query: 333 GVDSKLCV 340
GVD+ + V
Sbjct: 399 GVDNTVRV 406
Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 73/231 (31%), Positives = 117/231 (50%)
Query: 1 EKVLEIEYIKAVAPQKEEEPSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAGGVCTHIL 60
E +EIEY++ + ++ LHDDWVSAV +IL+GCYDN +W G HIL
Sbjct: 83 EDAIEIEYVERFPAPEPQDCLLHDDWVSAVKARGK-WILSGCYDNSLNLWTNKG--KHIL 139
Query: 61 --EGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGH 118
GH + +V+ I D V+T S+DQT LWK++ + + +GH
Sbjct: 140 TISGHTAPIKAVDWISLDEETGRFVST-SQDQTAMLWKWNVGS-----NAVDCVSVCKGH 193
Query: 119 KASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEA 178
+ V S++ G +GSWD + +W D G + S K+ K + V P++
Sbjct: 194 ERGVDSVSVSPDGLRFATGSWDTMLKVWSAELDD--GVEGSSKRMKESG-VRTPKI---- 246
Query: 179 ISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKAL 229
TL GH + VS+V W T+ + SWD++++ WD+ + ++I K++
Sbjct: 247 --TLQGHRESVSAVQWMDATTLLTGSWDYTLKVWDLSLEGIKTEISTNKSI 295
>UNIPROTKB|B4GT01 [details] [associations]
symbol:GL26386 "Ribosome biogenesis protein WDR12 homolog"
species:7234 "Drosophila persimilis" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070545
GO:GO:0000463 EMBL:CH479189 InterPro:IPR012972 Pfam:PF08154
KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_002021667.1
ProteinModelPortal:B4GT01 EnsemblMetazoa:FBtr0192001 GeneID:6596580
KEGG:dpe:Dper_GL26386 FlyBase:FBgn0163968 Uniprot:B4GT01
Length = 419
Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 93/308 (30%), Positives = 147/308 (47%)
Query: 37 FILTGCYDNLGRVWKAGGVCTHILE--GHCGAVSSVNIIKSDGLKYVTVATASKDQTLRL 94
+ILTGCYDN +W G HIL GH + +V+ I D ++S+DQT L
Sbjct: 117 WILTGCYDNTLNIWTNKG--KHILTIPGHTAPIKAVDWISLDD-DTGRFVSSSQDQTAML 173
Query: 95 WKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAA 154
W+++ + + +GH+ V S++ G +GSWD + +W DA
Sbjct: 174 WQWNVGA-----NTVECVSVCKGHERGVDSVSVSPDGQRFATGSWDTMLKVWSAELEDA- 227
Query: 155 GNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDV 214
G S KR + V P++ TL GH + +S+V W T+ + SWDH+++ WD+
Sbjct: 228 GEGTS--KRMKESGVRTPKI------TLQGHRESISAVQWMDASTLLTGSWDHTLKVWDL 279
Query: 215 EMGKDLSDIFCGKALNCIDIG-GEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNS 273
+ ++I K++ D + + LI +D LR++D R S + HN+
Sbjct: 280 SLEGIKAEISTNKSI--FDASYSKLNHLILTASADKNLRLYDSRTNQGSVVRNTYLGHNA 337
Query: 274 WISACKWHNKSWFHLISASYDGKVMLWDLRTAW-PLSVIDSHKDKVLCADWWRGDSVISG 332
W+ W F +S SYD + LWD R+ PL + H +KVL DW ++SG
Sbjct: 338 WVQTVMWSTTEEFLFVSGSYDNQNKLWDCRSPKAPLYDLLGHGEKVLDIDWTNPKYIVSG 397
Query: 333 GVDSKLCV 340
G D+ + V
Sbjct: 398 GSDNTVRV 405
Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
Identities = 73/231 (31%), Positives = 116/231 (50%)
Query: 1 EKVLEIEYIKAVAPQKEEEPSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAGGVCTHIL 60
E +EIEY++ + ++ LHDDWVSAV S +ILTGCYDN +W G HIL
Sbjct: 82 EDAIEIEYVERFPAPEPQDCLLHDDWVSAVKASGK-WILTGCYDNTLNIWTNKG--KHIL 138
Query: 61 E--GHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGH 118
GH + +V+ I D ++S+DQT LW+++ + + +GH
Sbjct: 139 TIPGHTAPIKAVDWISLDD-DTGRFVSSSQDQTAMLWQWNVGA-----NTVECVSVCKGH 192
Query: 119 KASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEA 178
+ V S++ G +GSWD + +W DA G S KR + V P++
Sbjct: 193 ERGVDSVSVSPDGQRFATGSWDTMLKVWSAELEDA-GEGTS--KRMKESGVRTPKI---- 245
Query: 179 ISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKAL 229
TL GH + +S+V W T+ + SWDH+++ WD+ + ++I K++
Sbjct: 246 --TLQGHRESISAVQWMDASTLLTGSWDHTLKVWDLSLEGIKAEISTNKSI 294
>UNIPROTKB|Q29KQ0 [details] [associations]
symbol:GA19813 "Ribosome biogenesis protein WDR12 homolog"
species:46245 "Drosophila pseudoobscura pseudoobscura" [GO:0000463
"maturation of LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH379061 GO:GO:0070545
GO:GO:0000463 InterPro:IPR012972 Pfam:PF08154 HSSP:P61964 KO:K14863
OMA:LQTRFFT OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_001356065.1
ProteinModelPortal:Q29KQ0 GeneID:4816649 KEGG:dpo:Dpse_GA19813
FlyBase:FBgn0079809 InParanoid:Q29KQ0 Uniprot:Q29KQ0
Length = 419
Score = 375 (137.1 bits), Expect = 1.3e-34, P = 1.3e-34
Identities = 93/308 (30%), Positives = 147/308 (47%)
Query: 37 FILTGCYDNLGRVWKAGGVCTHILE--GHCGAVSSVNIIKSDGLKYVTVATASKDQTLRL 94
+ILTGCYDN +W G HIL GH + +V+ I D ++S+DQT L
Sbjct: 117 WILTGCYDNTLNIWTNKG--KHILTIPGHTAPIKAVDWISLDD-DTGRFVSSSQDQTAML 173
Query: 95 WKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAA 154
W+++ + + +GH+ V S++ G +GSWD + +W DA
Sbjct: 174 WQWNVGA-----NTVECVSVCKGHERGVDSVSVSPDGQRFATGSWDTMLKVWSAELEDA- 227
Query: 155 GNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDV 214
G S KR + V P++ TL GH + +S+V W T+ + SWDH+++ WD+
Sbjct: 228 GEGTS--KRMKESGVRTPKI------TLQGHRESISAVQWMDASTLLTGSWDHTLKVWDL 279
Query: 215 EMGKDLSDIFCGKALNCIDIG-GEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNS 273
+ ++I K++ D + + LI +D LR++D R S + HN+
Sbjct: 280 SLEGIKAEISTNKSI--FDASYSKLNHLILTASADKNLRLYDSRTNQGSVVRNTYLGHNA 337
Query: 274 WISACKWHNKSWFHLISASYDGKVMLWDLRTAW-PLSVIDSHKDKVLCADWWRGDSVISG 332
W+ W F +S SYD + LWD R+ PL + H +KVL DW ++SG
Sbjct: 338 WVQTVMWSTTEEFLFVSGSYDNQNKLWDCRSPKAPLYDLLGHGEKVLDIDWSNPKYIVSG 397
Query: 333 GVDSKLCV 340
G D+ + V
Sbjct: 398 GSDNTVRV 405
Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
Identities = 73/231 (31%), Positives = 116/231 (50%)
Query: 1 EKVLEIEYIKAVAPQKEEEPSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAGGVCTHIL 60
E +EIEY++ + ++ LHDDWVSAV S +ILTGCYDN +W G HIL
Sbjct: 82 EDAIEIEYVERFPAPEPQDCLLHDDWVSAVKASGK-WILTGCYDNTLNIWTNKG--KHIL 138
Query: 61 E--GHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGH 118
GH + +V+ I D ++S+DQT LW+++ + + +GH
Sbjct: 139 TIPGHTAPIKAVDWISLDD-DTGRFVSSSQDQTAMLWQWNVGA-----NTVECVSVCKGH 192
Query: 119 KASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEA 178
+ V S++ G +GSWD + +W DA G S KR + V P++
Sbjct: 193 ERGVDSVSVSPDGQRFATGSWDTMLKVWSAELEDA-GEGTS--KRMKESGVRTPKI---- 245
Query: 179 ISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKAL 229
TL GH + +S+V W T+ + SWDH+++ WD+ + ++I K++
Sbjct: 246 --TLQGHRESISAVQWMDASTLLTGSWDHTLKVWDLSLEGIKAEISTNKSI 294
>ASPGD|ASPL0000073231 [details] [associations]
symbol:AN4469 species:162425 "Emericella nidulans"
[GO:0051276 "chromosome organization" evidence=IEA] [GO:0042273
"ribosomal large subunit biogenesis" evidence=IEA] [GO:0070545
"PeBoW complex" evidence=IEA] [GO:0030687 "preribosome, large
subunit precursor" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030687 EMBL:BN001303
GO:GO:0051276 GO:GO:0006364 GO:GO:0070545 EMBL:AACD01000077
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
HAMAP:MF_03029 OMA:DCTINLW RefSeq:XP_662073.1
ProteinModelPortal:Q5B4R1 STRING:Q5B4R1
EnsemblFungi:CADANIAT00005982 GeneID:2872271 KEGG:ani:AN4469.2
OrthoDB:EOG4GQTDF Uniprot:Q5B4R1
Length = 485
Score = 329 (120.9 bits), Expect = 1.7e-32, Sum P(2) = 1.7e-32
Identities = 104/332 (31%), Positives = 155/332 (46%)
Query: 1 EKVLEIEYIKAVAPQKEEEPSLHDDWVSAVD---GSNPGF------------ILTGCYDN 45
E LEIEY++A+ P HDDWVS++D S+P IL+G YD
Sbjct: 89 ETTLEIEYVRALIPPLHIASFEHDDWVSSIDVLSTSSPASAGSDAIARGQERILSGSYDG 148
Query: 46 LGRVWKAGG--VCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKF-DAEEL 102
RVW + T G +SS+ K + ++A+A D+T+RLWK+ +AE+
Sbjct: 149 FLRVWNMSSQVIATSPSPTDGGHISSIKAAKF--ISPSSIASAGLDRTVRLWKYTEAED- 205
Query: 103 VNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSI-- 160
KI L GHK+ ++S+A S N + S S D + W T SDA S+
Sbjct: 206 -GFSGKIVPQVELYGHKSGINSLAVHASTNRILSASADHNVGFWSTKKSDAPAAPESLLP 264
Query: 161 -------KKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQE-TI-YSASWDHSVRT 211
K+RK N V Q G ++ L GHT VS ++ ++ T+ YS SWDHS+RT
Sbjct: 265 SAASRTSKRRKLNASVSVSQ-RGP-LALLSGHTAPVSDAIFDARDSTVGYSVSWDHSLRT 322
Query: 212 WDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSH 271
WD+ + +L + + + L+A G S + + DPR + H
Sbjct: 323 WDLVTAALVDTRTTSHSLLSLQHLPDHN-LLATGTSARHITLIDPRASAATISAMTLRGH 381
Query: 272 NSWISACKWHNKSWFHLISASYDGKVMLWDLR 303
+ + + S + LIS S+DG +WDLR
Sbjct: 382 TNAVVSLARDPHSIYGLISGSHDGTCRIWDLR 413
Score = 43 (20.2 bits), Expect = 1.7e-32, Sum P(2) = 1.7e-32
Identities = 8/30 (26%), Positives = 15/30 (50%)
Query: 317 KVLCADWWRGDSVISGGVDSKLCVSSGVSI 346
KV W R ++S G D ++ ++ G +
Sbjct: 452 KVFSVCWDREVGIVSAGEDKRIQINRGEGV 481
>CGD|CAL0005315 [details] [associations]
symbol:YTM1 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0070545 "PeBoW complex"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] [GO:0051276 "chromosome organization" evidence=IEA]
[GO:0042273 "ribosomal large subunit biogenesis" evidence=IEA]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0071216 "cellular response to
biotic stimulus" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005315 GO:GO:0005654
GO:GO:0071216 GO:GO:0036180 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009267 EMBL:AACQ01000001 EMBL:AACQ01000002
GO:GO:0036170 GO:GO:0006364 InterPro:IPR012972 Pfam:PF08154
KO:K14863 HAMAP:MF_03029 RefSeq:XP_723311.1 RefSeq:XP_723501.1
ProteinModelPortal:Q5APF0 STRING:Q5APF0 GeneID:3634765
GeneID:3634970 KEGG:cal:CaO19.12278 KEGG:cal:CaO19.4815
Uniprot:Q5APF0
Length = 466
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 107/383 (27%), Positives = 174/383 (45%)
Query: 1 EKVLEIEYIKAVAPQKEEEPSLHDDWVSAVDGSNPGF--------------ILTGCYDNL 46
E L +EY +A+ P +DDW+S++D NP IL+G YD +
Sbjct: 90 EAFLTLEYTRAILPPSFLASFNNDDWISSIDSINPTTKIVMSSQLSISQPKILSGSYDGI 149
Query: 47 GRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHP 106
R + G GH V +V I + +A D+ +RLWK EE+++
Sbjct: 150 VRTYNMSGKVEKQYVGHSAPVKAVKWISP-----TRIVSAGNDRQVRLWKTSYEEIIDED 204
Query: 107 KKI----RSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAG------- 155
++ ++ +L GHKA V +A +T N + S +D I W TN +
Sbjct: 205 EEEIEDGKTLALLEGHKAPVVDLAVDTQTNRILSAGYDQNIGFWSTNYKEMTSIQPLEYD 264
Query: 156 -NQVSIKKRKGNNQ-VEEPQLEGEA-ISTLVGHTQCVSSVVWPQQE-TI-YSASWDHSVR 210
N VS +K V++ + A +S L GH++ V V++ ++ T+ YS S DH+++
Sbjct: 265 SNVVSSSSKKRRKMAVQDATIRRRAPLSLLQGHSEPVEGVIFDAKDSTVGYSVSQDHTIK 324
Query: 211 TWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTS-APVFQFS 269
TWD+ + + G +L + + LIA+G S + + DPR TS + +
Sbjct: 325 TWDLVTSRCVDTRTTGYSLLSV-LQLPQVNLIASGSSARHINLHDPRVTTTSDQTISKLV 383
Query: 270 SHNSWISA--CKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVID----SHKDKVLCADW 323
H +++ HN++ F S+S+DG V +WD+R L I S K+ W
Sbjct: 384 GHTNFVVGLTASPHNQNMF--ASSSHDGTVKVWDVRAEKSLYTITRQDGSTNAKIFDVCW 441
Query: 324 WRGDSVISGGVDSKLCVSSGVSI 346
+ISGG D KL ++ G I
Sbjct: 442 DDRIGIISGGEDKKLQINKGSDI 464
>UNIPROTKB|Q5APF0 [details] [associations]
symbol:YTM1 "Ribosome biogenesis protein YTM1"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0009267 "cellular response to
starvation" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0036170 "filamentous growth of a population of
unicellular organisms in response to starvation" evidence=IMP]
[GO:0036180 "filamentous growth of a population of unicellular
organisms in response to biotic stimulus" evidence=IMP] [GO:0071216
"cellular response to biotic stimulus" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005315 GO:GO:0005654 GO:GO:0071216 GO:GO:0036180
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0009267
EMBL:AACQ01000001 EMBL:AACQ01000002 GO:GO:0036170 GO:GO:0006364
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HAMAP:MF_03029
RefSeq:XP_723311.1 RefSeq:XP_723501.1 ProteinModelPortal:Q5APF0
STRING:Q5APF0 GeneID:3634765 GeneID:3634970 KEGG:cal:CaO19.12278
KEGG:cal:CaO19.4815 Uniprot:Q5APF0
Length = 466
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 107/383 (27%), Positives = 174/383 (45%)
Query: 1 EKVLEIEYIKAVAPQKEEEPSLHDDWVSAVDGSNPGF--------------ILTGCYDNL 46
E L +EY +A+ P +DDW+S++D NP IL+G YD +
Sbjct: 90 EAFLTLEYTRAILPPSFLASFNNDDWISSIDSINPTTKIVMSSQLSISQPKILSGSYDGI 149
Query: 47 GRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHP 106
R + G GH V +V I + +A D+ +RLWK EE+++
Sbjct: 150 VRTYNMSGKVEKQYVGHSAPVKAVKWISP-----TRIVSAGNDRQVRLWKTSYEEIIDED 204
Query: 107 KKI----RSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAG------- 155
++ ++ +L GHKA V +A +T N + S +D I W TN +
Sbjct: 205 EEEIEDGKTLALLEGHKAPVVDLAVDTQTNRILSAGYDQNIGFWSTNYKEMTSIQPLEYD 264
Query: 156 -NQVSIKKRKGNNQ-VEEPQLEGEA-ISTLVGHTQCVSSVVWPQQE-TI-YSASWDHSVR 210
N VS +K V++ + A +S L GH++ V V++ ++ T+ YS S DH+++
Sbjct: 265 SNVVSSSSKKRRKMAVQDATIRRRAPLSLLQGHSEPVEGVIFDAKDSTVGYSVSQDHTIK 324
Query: 211 TWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTS-APVFQFS 269
TWD+ + + G +L + + LIA+G S + + DPR TS + +
Sbjct: 325 TWDLVTSRCVDTRTTGYSLLSV-LQLPQVNLIASGSSARHINLHDPRVTTTSDQTISKLV 383
Query: 270 SHNSWISA--CKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVID----SHKDKVLCADW 323
H +++ HN++ F S+S+DG V +WD+R L I S K+ W
Sbjct: 384 GHTNFVVGLTASPHNQNMF--ASSSHDGTVKVWDVRAEKSLYTITRQDGSTNAKIFDVCW 441
Query: 324 WRGDSVISGGVDSKLCVSSGVSI 346
+ISGG D KL ++ G I
Sbjct: 442 DDRIGIISGGEDKKLQINKGSDI 464
>POMBASE|SPAC890.04c [details] [associations]
symbol:SPAC890.04c "ribosome biogenesis protein Ytm1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0005730 "nucleolus" evidence=ISO] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0015630 "microtubule cytoskeleton" evidence=ISS]
[GO:0016043 "cellular component organization" evidence=NAS]
[GO:0042254 "ribosome biogenesis" evidence=ISO] [GO:0043234
"protein complex" evidence=NAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPAC890.04c GO:GO:0043234
GO:GO:0005654 EMBL:CU329670 GO:GO:0005730 GO:GO:0015630
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042254 GO:GO:0006364
GO:GO:0016043 InterPro:IPR012972 Pfam:PF08154 KO:K14863
HOGENOM:HOG000264464 HAMAP:MF_03029 OMA:DCTINLW OrthoDB:EOG4GQTDF
EMBL:AF237708 PIR:T50260 RefSeq:NP_594822.1
ProteinModelPortal:Q9URY0 STRING:Q9URY0 EnsemblFungi:SPAC890.04c.1
GeneID:2543549 KEGG:spo:SPAC890.04c NextBio:20804558 Uniprot:Q9URY0
Length = 440
Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 100/362 (27%), Positives = 164/362 (45%)
Query: 1 EKVLEIEYIKAVAPQKEEEPSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAGGVCTHIL 60
E +L+IEYI++ P HDDW+S + ++ ILT YD + RVW G
Sbjct: 81 ESILDIEYIQSTLPPAYLASFSHDDWISGIQLTSDT-ILTSSYDGIARVWDKSGEIKFQS 139
Query: 61 EGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILR---- 116
G CG SS+ S + + TAS DQ + W + E + +K +S IL+
Sbjct: 140 TG-CG--SSLKSA-SWHIPNQSFLTASLDQKIFHWVIEEPESMLDAEK-KSSGILQTLFV 194
Query: 117 GHKASVHSIAAETSGNMVCSGSWDCTISLW---RTNDSDAAGNQVSI-KKRKGNNQVEEP 172
GHK V + + S ++ S S D T+ +W R+ ++ SI KKR+ N P
Sbjct: 195 GHKDIVERVRSLESSSVFISASADNTVGIWDFERSPETTLESFSSSISKKRRRKNAEFTP 254
Query: 173 QLEGEAISTLV-GHTQCVSSVVWPQQETI-YSASWDHSVRTWDVEMGKDLSDIFCGKALN 230
Q + L GHT V +V+ ++ YS DH+++TWD+ G+++ L
Sbjct: 255 QAGARSPLILCEGHTGPVMDIVFSDDPSVAYSVGQDHTIKTWDLITGQNVDSKITKAPLL 314
Query: 231 CIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLIS 290
C++ + L+ G S + + DPR S H + +S ++ + S
Sbjct: 315 CVEKLTD-LHLVICGSSARHIVVHDPRAGSDKIVSHTLSGHKNLVSGLSASPENPYMFAS 373
Query: 291 ASYDGKVMLWDLR-TAWPLSVID------SHKDKVLCADWWRGDSVISGGVDSKLCVSSG 343
S+D +WD+R T+ + I S DK+ DW + +++GG D +L ++
Sbjct: 374 VSHDNTCRVWDVRATSGSIYTISRAEKTGSQWDKLFAVDWNKSIGIVTGGTDKQLQINQS 433
Query: 344 VS 345
S
Sbjct: 434 SS 435
>WB|WBGene00018893 [details] [associations]
symbol:tag-345 species:6239 "Caenorhabditis elegans"
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0040019 "positive regulation of
embryonic development" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0007276 "gamete
generation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0040007 GO:GO:0040010
GO:GO:0005654 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0040035
GO:GO:0040019 GO:GO:0070545 GO:GO:0000463 GO:GO:0007276
InterPro:IPR012972 Pfam:PF08154 EMBL:FO081477 KO:K14863
HAMAP:MF_03029 GeneTree:ENSGT00640000091456 HOGENOM:HOG000154844
PIR:T29587 RefSeq:NP_491655.1 ProteinModelPortal:P91343 SMR:P91343
STRING:P91343 PaxDb:P91343 EnsemblMetazoa:F55F8.5.1
EnsemblMetazoa:F55F8.5.2 GeneID:172226 KEGG:cel:CELE_F55F8.5
UCSC:F55F8.5.1 CTD:172226 WormBase:F55F8.5 InParanoid:P91343
OMA:FEFLVGE NextBio:874587 Uniprot:P91343
Length = 439
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 93/348 (26%), Positives = 164/348 (47%)
Query: 1 EKVLEIEYIKAVAPQKEEEPSLHDDWVSAVDGSNPGFILTGCYD-NLGRVWKAGGVCTHI 59
E +L++E + + K DWVS+V +N G I + Y ++ V + G
Sbjct: 96 ETILKVECVIGIEAPKPLHDIQAPDWVSSVQIAN-GHIFSTTYGGDIVIVDRKGKETKLA 154
Query: 60 LEGHCGAVSSVNIIKS-------DGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSF 112
+ + ++I+K+ DG ++V ++Q L L+ + LV +K+
Sbjct: 155 VNSANRLLKCISIVKAPSKKNQLDGTEFVV---GGENQLLTLYAIEKGALV---EKL--- 205
Query: 113 KILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEP 172
ILRGH+ +V ++ + SGS D + +W + SD A ++ + + +
Sbjct: 206 -ILRGHERAVECVSVNSDSTRAISGSVDTNLKIWNLDASDEATTYEKEEEEESAKKRRKK 264
Query: 173 QLEGEA-ISTLVGHTQCVSSVVW-PQQET-IYSASWDHSVRTWDVEMGKDLSDIFCGKAL 229
+ + + + T+ GH VS+V W P +S SWDH++ WD+E+ ++S I K+
Sbjct: 265 ETKTKVPMVTIGGHRDKVSAVEWCPWNSGHAFSCSWDHTIVEWDLELAGEISRIKGPKSF 324
Query: 230 NCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSH-NSWISACKWHNKSWFHL 288
ID+ + LI++ +D I R++DP+ S F H N W+ A KW+
Sbjct: 325 TSIDLHPKSDLLISSC-TDAIPRLYDPKNRDGSMVKQSFIGHQNGWVEAVKWNPLDTNQF 383
Query: 289 ISASYDGKVMLWDLRTAWP-LSVIDSHKDKVLCADWWRGDSVISGGVD 335
+S S D +WD+R++ L I H D++LCA W G + +G D
Sbjct: 384 VSVSTDKTAKMWDVRSSKSSLFDIHGHDDRILCATWNEG-LIATGSAD 430
>UNIPROTKB|P91343 [details] [associations]
symbol:tag-345 "Ribosome biogenesis protein WDR12 homolog"
species:6239 "Caenorhabditis elegans" [GO:0070545 "PeBoW complex"
evidence=ISS] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0005654
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0040035 GO:GO:0040019
GO:GO:0070545 GO:GO:0000463 GO:GO:0007276 InterPro:IPR012972
Pfam:PF08154 EMBL:FO081477 KO:K14863 HAMAP:MF_03029
GeneTree:ENSGT00640000091456 HOGENOM:HOG000154844 PIR:T29587
RefSeq:NP_491655.1 ProteinModelPortal:P91343 SMR:P91343
STRING:P91343 PaxDb:P91343 EnsemblMetazoa:F55F8.5.1
EnsemblMetazoa:F55F8.5.2 GeneID:172226 KEGG:cel:CELE_F55F8.5
UCSC:F55F8.5.1 CTD:172226 WormBase:F55F8.5 InParanoid:P91343
OMA:FEFLVGE NextBio:874587 Uniprot:P91343
Length = 439
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 93/348 (26%), Positives = 164/348 (47%)
Query: 1 EKVLEIEYIKAVAPQKEEEPSLHDDWVSAVDGSNPGFILTGCYD-NLGRVWKAGGVCTHI 59
E +L++E + + K DWVS+V +N G I + Y ++ V + G
Sbjct: 96 ETILKVECVIGIEAPKPLHDIQAPDWVSSVQIAN-GHIFSTTYGGDIVIVDRKGKETKLA 154
Query: 60 LEGHCGAVSSVNIIKS-------DGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSF 112
+ + ++I+K+ DG ++V ++Q L L+ + LV +K+
Sbjct: 155 VNSANRLLKCISIVKAPSKKNQLDGTEFVV---GGENQLLTLYAIEKGALV---EKL--- 205
Query: 113 KILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEP 172
ILRGH+ +V ++ + SGS D + +W + SD A ++ + + +
Sbjct: 206 -ILRGHERAVECVSVNSDSTRAISGSVDTNLKIWNLDASDEATTYEKEEEEESAKKRRKK 264
Query: 173 QLEGEA-ISTLVGHTQCVSSVVW-PQQET-IYSASWDHSVRTWDVEMGKDLSDIFCGKAL 229
+ + + + T+ GH VS+V W P +S SWDH++ WD+E+ ++S I K+
Sbjct: 265 ETKTKVPMVTIGGHRDKVSAVEWCPWNSGHAFSCSWDHTIVEWDLELAGEISRIKGPKSF 324
Query: 230 NCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSH-NSWISACKWHNKSWFHL 288
ID+ + LI++ +D I R++DP+ S F H N W+ A KW+
Sbjct: 325 TSIDLHPKSDLLISSC-TDAIPRLYDPKNRDGSMVKQSFIGHQNGWVEAVKWNPLDTNQF 383
Query: 289 ISASYDGKVMLWDLRTAWP-LSVIDSHKDKVLCADWWRGDSVISGGVD 335
+S S D +WD+R++ L I H D++LCA W G + +G D
Sbjct: 384 VSVSTDKTAKMWDVRSSKSSLFDIHGHDDRILCATWNEG-LIATGSAD 430
>UNIPROTKB|A8XL02 [details] [associations]
symbol:tag-345 "Ribosome biogenesis protein WDR12 homolog"
species:6238 "Caenorhabditis briggsae" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0070545 GO:GO:0000463
InterPro:IPR012972 Pfam:PF08154 EMBL:HE600904 HAMAP:MF_03029
ProteinModelPortal:A8XL02 STRING:A8XL02 EnsemblMetazoa:CBG14922
WormBase:CBG14922 HOGENOM:HOG000154844 Uniprot:A8XL02
Length = 446
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 102/361 (28%), Positives = 166/361 (45%)
Query: 1 EKVLEIEYIKAVAPQKEEEPSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAGGVCTHIL 60
E +L+IE I + K DWVS+V +N T + + G +
Sbjct: 96 ETILKIECIIGIEAPKPLHDIQAPDWVSSVQVANGHTKSTNLFSIFSTTY-GGDIVIVDR 154
Query: 61 EGHCG--AVSSVN-IIKSDGLKYVT---------VATASKDQTLRLWKFDAEELVNHPKK 108
+G +V+S N I+K G+ T ++Q L L++ + LV +K
Sbjct: 155 KGKETKLSVNSANRILKCSGIVRTTKKVQLEGTEFIVGGENQLLTLYEIEKGALV---EK 211
Query: 109 IRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAG------NQVSIKK 162
I + RGH+ +V ++ + SGS D + +W + SD A + S KK
Sbjct: 212 I----VFRGHERAVECVSVNSDATRAISGSVDTNLKVWNLDPSDEATIYEKEEEESSAKK 267
Query: 163 -RKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQET-IYSASWDHSVRTWDVEMGKD 219
RK + + + P + T+ GH VSSVVW P + +S SWDH+V WD+E+ +
Sbjct: 268 KRKKDTRTKVPMV------TIGGHRDKVSSVVWCPWKSGHAFSCSWDHTVVQWDLELAGE 321
Query: 220 LSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSH-NSWISAC 278
+S I K+ IDI + LI++ +D I R++DP+ + F H N W+ +
Sbjct: 322 VSRIKGPKSFTSIDIHPTSNLLISSC-TDAIPRLYDPKNRDGAMVKQSFIGHQNGWVESV 380
Query: 279 KWHNKSWFHLISASYDGKVMLWDLRTAWP-LSVIDSHKDKVLCADWWRGDSVISGGVDSK 337
KW+ +S S D +WD+R++ L I H+D++LCA W G + +G D
Sbjct: 381 KWNPVDENQFVSVSTDKTAKMWDVRSSKSSLFDIHGHEDRILCAAWNEG-LIATGSADCS 439
Query: 338 L 338
+
Sbjct: 440 I 440
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 245 (91.3 bits), Expect = 2.8e-19, P = 2.8e-19
Identities = 88/331 (26%), Positives = 142/331 (42%)
Query: 29 AVDGSNPGFILTGCYDNLGRVWK-AGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATAS 87
A++ S FI TG YD ++W A G H LEGH V ++ G K +AT S
Sbjct: 99 ALNKSGSCFI-TGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDK---IATGS 154
Query: 88 KDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWR 147
D+T +LW + + + RGH A + ++ +V +GS D T LW
Sbjct: 155 FDKTCKLWSVETG---------KCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWD 205
Query: 148 TNDSDAA----GNQ---VSIKKRKGNNQVEEPQLE----------GEAISTLVGHTQCVS 190
+ G+ +S+ N++ + G + TL+GH +S
Sbjct: 206 IQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEIS 265
Query: 191 SVVWPQQ-ETIYSASWDHSVRTWDVEMGKDLSDI--FCGKALN-CIDIGGEGSALIAAGG 246
S V+ I + S D + + WD GK ++ + + L+ C D G+ LIA
Sbjct: 266 SAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGK---LIATAS 322
Query: 247 SDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAW 306
+D RI+ T V + H IS + N L++ S D +WD +T
Sbjct: 323 ADGTARIFSA---ATRECVTKLEGHEGEISKISF-NPQGNRLLTGSSDKTARIWDAQTGQ 378
Query: 307 PLSVIDSHKDKVL-CADWWRGDSVISGGVDS 336
L V++ H D++ CA ++GD +I+G D+
Sbjct: 379 CLQVLEGHTDEIFSCAFNYKGDIIITGSKDN 409
Score = 156 (60.0 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 45/169 (26%), Positives = 80/169 (47%)
Query: 176 GEAISTLVGHTQCVSSVVW--PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALN--C 231
GE + TL GH V ++ + P + I + S+D + + W VE GK F G C
Sbjct: 124 GEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGK-CYHTFRGHTAEIVC 182
Query: 232 IDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291
+ + S L+A G D ++WD + + VF + H++ I + + N S +I+
Sbjct: 183 LSFNPQ-STLVATGSMDTTAKLWDIQ---SGEEVFTLTGHSAEIISLSF-NTSGNRIITG 237
Query: 292 SYDGKVMLWDLRTAWPLSVIDSHKDKVLCADW-WRGDSVISGGVDSKLC 339
S+D V +W+ T + + H ++ A + W +++G +D K C
Sbjct: 238 SFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMD-KTC 285
Score = 147 (56.8 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 42/130 (32%), Positives = 63/130 (48%)
Query: 23 HDDWVSAVDGSNP-GF-ILTGCYDNLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLK 79
H + V A+ +NP G I TG +D ++W G C H GH + ++ L
Sbjct: 133 HRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTL- 191
Query: 80 YVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSW 139
VAT S D T +LW + E V F L GH A + S++ TSGN + +GS+
Sbjct: 192 ---VATGSMDTTAKLWDIQSGEEV--------FT-LTGHSAEIISLSFNTSGNRIITGSF 239
Query: 140 DCTISLWRTN 149
D T+++W +
Sbjct: 240 DHTVTVWEAD 249
Score = 116 (45.9 bits), Expect = 0.00055, P = 0.00055
Identities = 38/128 (29%), Positives = 59/128 (46%)
Query: 23 HDDWV--SAVDGSNPGFILTGCYDNLGRVWKAGG-VCTHILEGHCGAVSSVNIIKSDGLK 79
HDD + S D + I T D R++ A C LEGH G +S ++ G +
Sbjct: 302 HDDEILDSCFDYTGK-LIATASADGTARIFSAATRECVTKLEGHEGEISKISF-NPQGNR 359
Query: 80 YVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSW 139
+T S D+T R+W DA+ + ++L GH + S A G+++ +GS
Sbjct: 360 LLT---GSSDKTARIW--DAQTG-------QCLQVLEGHTDEIFSCAFNYKGDIIITGSK 407
Query: 140 DCTISLWR 147
D T +WR
Sbjct: 408 DNTCRIWR 415
Score = 86 (35.3 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 26/83 (31%), Positives = 41/83 (49%)
Query: 68 SSVNIIKSDGLKYVTVATASK-DQTLRLWKFDAEELVNHPK-KIRSFKILRGHKASVHSI 125
+ V+ + + K + TAS+ DQ L + +L H K FK+LR H + ++
Sbjct: 39 TDVSALVEEIQKAEPLITASRSDQVKLLIQRLQNKLGQHSNHKFYLFKVLRAHILPLTNV 98
Query: 126 AAETSGNMVCSGSWDCTISLWRT 148
A SG+ +GS+D T LW T
Sbjct: 99 ALNKSGSCFITGSYDRTCKLWDT 121
>DICTYBASE|DDB_G0275045 [details] [associations]
symbol:gpbB "Guanine nucleotide-binding protein
subunit beta-like protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275045 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 KO:K14753 OMA:IRVWQVM
EMBL:U27537 RefSeq:XP_643839.1 ProteinModelPortal:P46800 SMR:P46800
IntAct:P46800 STRING:P46800 SWISS-2DPAGE:P46800 PRIDE:P46800
EnsemblProtists:DDB0185122 GeneID:8619886 KEGG:ddi:DDB_G0275045
Uniprot:P46800
Length = 329
Score = 157 (60.3 bits), Expect = 2.5e-17, Sum P(2) = 2.5e-17
Identities = 49/144 (34%), Positives = 76/144 (52%)
Query: 176 GEAISTLVG---HTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGK---DLSDIFCGKA 228
GE TL G H VS + + P TI S SWD+ V+ WD++ K L+D G
Sbjct: 143 GECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWDIKSFKCNHTLTD-HTGY- 200
Query: 229 LNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWH-NKSWFH 287
+N + I +GS L A+GG D +W+ + P+++ + N+ I+A + NK W
Sbjct: 201 VNTVTISPDGS-LCASGGKDTFACLWEL---SSGKPLYKLEARNT-INALAFSPNKYW-- 253
Query: 288 LISASYDGKVMLWDLRTAWPLSVI 311
+SA+ D K+++WDL T L+ I
Sbjct: 254 -LSAATDDKIIIWDLLTKQVLAEI 276
Score = 142 (55.0 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 44/175 (25%), Positives = 81/175 (46%)
Query: 176 GEAISTLVGHTQCVSSVVWPQQ-ETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDI 234
G+A +L GH+ V VV + S SWD+++R WD+ G + +F G + + +
Sbjct: 60 GKAHRSLKGHSHFVQDVVISHDGQFALSGSWDNTLRLWDITKGVS-TRLFKGHTQDVMSV 118
Query: 235 G-GEGSALIAAGGSDPILRIWDPRKPGTSAPVFQF-SSHNSWISACKWHNKSWFHLISAS 292
+ I +G D +++W+ G + +H W+S ++ + + ++S S
Sbjct: 119 AFSSDNRQIISGSRDATIKVWNTL--GECKFTLEGPEAHQDWVSCIRF-SPNTPTIVSGS 175
Query: 293 YDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVI-SGGVDSKLCV---SSG 343
+D KV +WD+++ + H V S+ SGG D+ C+ SSG
Sbjct: 176 WDNKVKIWDIKSFKCNHTLTDHTGYVNTVTISPDGSLCASGGKDTFACLWELSSG 230
Score = 119 (46.9 bits), Expect = 2.5e-17, Sum P(2) = 2.5e-17
Identities = 42/135 (31%), Positives = 62/135 (45%)
Query: 23 HDDWVS--AVDGSNPGFILTGCYDNLGRVWK-------AGGVCTHILEGHCGAVSSVNII 73
H+ +V+ AV NP I++ D VW+ + G L+GH V V +I
Sbjct: 20 HNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSLKGHSHFVQDV-VI 78
Query: 74 KSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNM 133
DG ++ + S D TLRLW D + V S ++ +GH V S+A +
Sbjct: 79 SHDG-QFAL--SGSWDNTLRLW--DITKGV-------STRLFKGHTQDVMSVAFSSDNRQ 126
Query: 134 VCSGSWDCTISLWRT 148
+ SGS D TI +W T
Sbjct: 127 IISGSRDATIKVWNT 141
Score = 119 (46.9 bits), Expect = 0.00017, P = 0.00017
Identities = 49/182 (26%), Positives = 83/182 (45%)
Query: 168 QVEEPQLEGEAISTLVGHTQCVSSV-VWPQQ-ETIYSASWDHSVRTWDVEMGKDLSDIFC 225
Q + PQ+ + +LVGH V+S+ V P+ +TI S+S D +V W + S
Sbjct: 3 QQKAPQVTYLEVGSLVGHNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKA 62
Query: 226 GKALN-----CIDIGGEGSALIAAGGS-DPILRIWDPRKPGTSAPVFQFSSHNSWISACK 279
++L D+ A GS D LR+WD K G S +F+ + + A
Sbjct: 63 HRSLKGHSHFVQDVVISHDGQFALSGSWDNTLRLWDITK-GVSTRLFKGHTQDVMSVAFS 121
Query: 280 WHNKSWFHLISASYDGKVMLWDL--RTAWPLSVIDSHKDKVLCADWWRGD-SVISGGVDS 336
N+ +IS S D + +W+ + L ++H+D V C + +++SG D+
Sbjct: 122 SDNRQ---IISGSRDATIKVWNTLGECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDN 178
Query: 337 KL 338
K+
Sbjct: 179 KV 180
Score = 61 (26.5 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 16/54 (29%), Positives = 26/54 (48%)
Query: 115 LRGHKASVHSIAAETSG-NMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNN 167
L GH V SIA + + S S D T+ +W+ +DA + + KG++
Sbjct: 17 LVGHNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSLKGHS 70
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 229 (85.7 bits), Expect = 4.5e-17, P = 4.5e-17
Identities = 84/331 (25%), Positives = 143/331 (43%)
Query: 29 AVDGSNPGFILTGCYDNLGRVWK-AGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATAS 87
A++ S FI TG YD ++W A G + LEGH V ++ G K +AT S
Sbjct: 99 ALNKSGSCFI-TGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGDK---IATGS 154
Query: 88 KDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWR 147
D+T +LW + + + RGH A + ++ +V +GS D T LW
Sbjct: 155 FDKTCKLWSVETG---------KCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWD 205
Query: 148 TNDSDAA----GNQ---VSIKKRKGNNQVEEPQLE----------GEAISTLVGHTQCVS 190
+ + G+ +S+ +++ + G ++ L+GH +S
Sbjct: 206 IQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEIS 265
Query: 191 SVVWPQQ-ETIYSASWDHSVRTWDVEMGKDLSDI--FCGKALN-CIDIGGEGSALIAAGG 246
S + I + S D + + WD GK ++ + + L+ C D G+ LIA
Sbjct: 266 SASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGK---LIATAS 322
Query: 247 SDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAW 306
+D RI+ T + + H IS + N HL++ S D +WD +T
Sbjct: 323 ADGTARIFSA---ATRKCIAKLEGHEGEISKISF-NPQGNHLLTGSSDKTARIWDAQTGQ 378
Query: 307 PLSVIDSHKDKVL-CADWWRGDSVISGGVDS 336
L V++ H D++ CA ++G+ VI+G D+
Sbjct: 379 CLQVLEGHTDEIFSCAFNYKGNIVITGSKDN 409
Score = 167 (63.8 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 46/169 (27%), Positives = 83/169 (49%)
Query: 176 GEAISTLVGHTQCVSSVVW--PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALN--C 231
GE ++TL GH V ++ + P + I + S+D + + W VE GK F G C
Sbjct: 124 GEELNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGK-CYHTFRGHTAEIVC 182
Query: 232 IDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291
+ + S L+A G D ++WD + G V+ H++ I + + N S +I+
Sbjct: 183 LSFNPQ-STLVATGSMDTTAKLWDIQN-GEE--VYTLRGHSAEIISLSF-NTSGDRIITG 237
Query: 292 SYDGKVMLWDLRTAWPLSVIDSHKDKVLCADW-WRGDSVISGGVDSKLC 339
S+D V++WD T ++++ H ++ A + W +++G +D K C
Sbjct: 238 SFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMD-KTC 285
Score = 148 (57.2 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 46/142 (32%), Positives = 70/142 (49%)
Query: 23 HDDWVSAVDGSNP-GF-ILTGCYDNLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLK 79
H + V A+ +NP G I TG +D ++W G C H GH + ++ L
Sbjct: 133 HRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTL- 191
Query: 80 YVTVATASKDQTLRLWKF-DAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGS 138
VAT S D T +LW + EE+ LRGH A + S++ TSG+ + +GS
Sbjct: 192 ---VATGSMDTTAKLWDIQNGEEVYT----------LRGHSAEIISLSFNTSGDRIITGS 238
Query: 139 WDCTISLWRTNDSDAAGNQVSI 160
+D T+ +W D+D G +V+I
Sbjct: 239 FDHTVVVW---DADT-GRKVNI 256
Score = 118 (46.6 bits), Expect = 0.00033, P = 0.00033
Identities = 40/128 (31%), Positives = 58/128 (45%)
Query: 23 HDDWV--SAVDGSNPGFILTGCYDNLGRVWKAGG-VCTHILEGHCGAVSSVNIIKSDGLK 79
HDD + S D + I T D R++ A C LEGH G +S ++ G
Sbjct: 302 HDDEILDSCFDYTGK-LIATASADGTARIFSAATRKCIAKLEGHEGEISKISF-NPQGNH 359
Query: 80 YVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSW 139
+T S D+T R+W DA+ + ++L GH + S A GN+V +GS
Sbjct: 360 LLT---GSSDKTARIW--DAQTG-------QCLQVLEGHTDEIFSCAFNYKGNIVITGSK 407
Query: 140 DCTISLWR 147
D T +WR
Sbjct: 408 DNTCRIWR 415
Score = 81 (33.6 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 23/86 (26%), Positives = 42/86 (48%)
Query: 65 GAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELV--NHPKKIRSFKILRGHKASV 122
G + V+ + + K + TAS+ + ++L +E + N FK+L+ H +
Sbjct: 36 GPSTDVSALVEEIQKAEPLLTASRTEQVKLLIQRLQEKLGQNSNHTFYLFKVLKAHILPL 95
Query: 123 HSIAAETSGNMVCSGSWDCTISLWRT 148
++A SG+ +GS+D T LW T
Sbjct: 96 TNVALNKSGSCFITGSYDRTCKLWDT 121
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 229 (85.7 bits), Expect = 4.5e-17, P = 4.5e-17
Identities = 81/321 (25%), Positives = 138/321 (42%)
Query: 39 LTGCYDNLGRVWK-AGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKF 97
+TG YD +VW A G H LEGH V ++ G K +AT S D+T +LW
Sbjct: 108 ITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYGDK---IATGSFDKTCKLWSA 164
Query: 98 DAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAA--- 154
+ + + RGH A + ++ +V +GS D T LW +
Sbjct: 165 ETG---------KCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTL 215
Query: 155 -GNQ---VSIKKRKGNNQVEEPQLE----------GEAISTLVGHTQCVSSVVWPQQ-ET 199
G+ +S+ +++ + G + TL+GH +SS ++
Sbjct: 216 TGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSL 275
Query: 200 IYSASWDHSVRTWDVEMGKDLSDI--FCGKALN-CIDIGGEGSALIAAGGSDPILRIWDP 256
I + S D + WD GK ++ + + L+ C D G+ LIA +D R+++
Sbjct: 276 ILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGK---LIATASADGTARVYNA 332
Query: 257 RKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKD 316
T + + H IS + N L++ S D +WD++T L V++ H D
Sbjct: 333 T---TRKCITKLEGHEGEISKISF-NPQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTD 388
Query: 317 KVL-CADWWRGDSVISGGVDS 336
++ CA ++G+ VI+G D+
Sbjct: 389 EIFSCAFNYKGNIVITGSKDN 409
Score = 144 (55.7 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 42/128 (32%), Positives = 64/128 (50%)
Query: 23 HDDWVSAVDGSNP-GF-ILTGCYDNLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLK 79
H + V A+ +NP G I TG +D ++W A G C H GH + + S +
Sbjct: 133 HRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEI----VCLSFNPQ 188
Query: 80 YVTVATASKDQTLRLWKFDA-EELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGS 138
VAT S D T +LW + EE+V L GH A + S++ +TSG+ + +GS
Sbjct: 189 STVVATGSMDTTAKLWDIQSGEEVVT----------LTGHLAEIISLSFDTSGDRIITGS 238
Query: 139 WDCTISLW 146
+D T+ +W
Sbjct: 239 FDHTVVVW 246
Score = 141 (54.7 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 42/170 (24%), Positives = 79/170 (46%)
Query: 176 GEAISTLVGHTQCVSSVVW--PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALN--C 231
GE + TL GH V ++ + P + I + S+D + + W E GK F G C
Sbjct: 124 GEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGK-CYHTFRGHTAEIVC 182
Query: 232 IDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291
+ + S ++A G D ++WD + + V + H + I + + + S +I+
Sbjct: 183 LSFNPQ-STVVATGSMDTTAKLWDIQ---SGEEVVTLTGHLAEIISLSF-DTSGDRIITG 237
Query: 292 SYDGKVMLWDLRTAWPLSVIDSHKDKVLCADW-WRGDSVISGGVDSKLCV 340
S+D V++WD T + + H ++ A + W +++G +D K C+
Sbjct: 238 SFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMD-KTCM 286
Score = 115 (45.5 bits), Expect = 0.00071, P = 0.00071
Identities = 38/128 (29%), Positives = 57/128 (44%)
Query: 23 HDDWV--SAVDGSNPGFILTGCYDNLGRVWKAGG-VCTHILEGHCGAVSSVNIIKSDGLK 79
HDD + S D + I T D RV+ A C LEGH G +S ++ G +
Sbjct: 302 HDDEILDSCFDYTGK-LIATASADGTARVYNATTRKCITKLEGHEGEISKISF-NPQGNR 359
Query: 80 YVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSW 139
+T S D+T R+W + + ++L GH + S A GN+V +GS
Sbjct: 360 LLT---GSSDKTARIWDVQTGQCL---------QVLEGHTDEIFSCAFNYKGNIVITGSK 407
Query: 140 DCTISLWR 147
D + +WR
Sbjct: 408 DNSCRIWR 415
Score = 84 (34.6 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 24/83 (28%), Positives = 41/83 (49%)
Query: 68 SSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEE-LVNH-PKKIRSFKILRGHKASVHSI 125
+ VN + + K + TAS+ + +RL +E L H FK+LR H + ++
Sbjct: 39 TDVNTLVGEIQKVEPLITASRTKQVRLLVQRLQEKLRQHCDHNFYLFKVLRAHILPLTNV 98
Query: 126 AAETSGNMVCSGSWDCTISLWRT 148
A +G+ +GS+D T +W T
Sbjct: 99 ALNKAGSCFITGSYDRTCKVWDT 121
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 227 (85.0 bits), Expect = 8.1e-17, P = 8.1e-17
Identities = 93/332 (28%), Positives = 141/332 (42%)
Query: 29 AVDGSNPGFILTGCYDNLGRVWK-AGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATAS 87
A + S FI TG YD ++W A G H LEGH V ++ G K VAT S
Sbjct: 99 AFNKSGSCFI-TGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYGDK---VATGS 154
Query: 88 KDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWR 147
D+T +LW + + F RGH A + +A +V +GS D T LW
Sbjct: 155 FDKTCKLWSAETG---------KCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWD 205
Query: 148 TND----SDAAGNQVSIKK----RKGNNQV----EEPQL-----EGEAISTLVGHTQCVS 190
S AG+ I G+ V + + G + L GH +S
Sbjct: 206 VESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEIS 265
Query: 191 SVVWPQQ-ETIYSASWDHSVRTWDVEMGKDLSDIFC--GKALN-CIDIGGEGSALIAAGG 246
V + I +AS D S + WD E G+ L+ + + L+ C + G+ LIA
Sbjct: 266 CVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQ---LIATAS 322
Query: 247 SDPILRIWDPRKPGTSAPVFQFSSHNSWIS-ACKWHNKSWFHLISASYDGKVMLWDLRTA 305
+D R++ T + Q H IS C N +++AS D +W ++T
Sbjct: 323 ADGTSRVFST---DTFQCLCQLEGHKGEISKVC--FNAQGSRVLTASVDKTSRVWCVKTG 377
Query: 306 WPLSVIDSHKDKVL-CADWWRGDSVISGGVDS 336
L V++ H D++ CA + GD++I+G D+
Sbjct: 378 ACLQVLEGHSDEIFSCAFNYEGDTIITGSKDN 409
Score = 151 (58.2 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 42/169 (24%), Positives = 76/169 (44%)
Query: 176 GEAISTLVGHTQCVSSVVW--PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCID 233
GE + TL GH V ++ + P + + + S+D + + W E GK F G +
Sbjct: 124 GEELHTLEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYT-FRGHTAEIVC 182
Query: 234 IG-GEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWI-SACKWHNKSWFHLISA 291
+ S L+A G D ++WD + V + H + I S C N + L++
Sbjct: 183 LAFNPQSTLVATGSMDTTAKLWDVE---SGEEVSTLAGHFAEIISLC--FNTTGDRLVTG 237
Query: 292 SYDGKVMLWDLRTAWPLSVIDSHKDKVLCADW-WRGDSVISGGVDSKLC 339
S+D +LWD+ + + V+ H+ ++ C + W + + +D K C
Sbjct: 238 SFDHTAILWDVPSGRKVHVLSGHRGEISCVQFNWDCSLIATASLD-KSC 285
Score = 125 (49.1 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 39/127 (30%), Positives = 60/127 (47%)
Query: 23 HDDWVSAVDGSNP-GF-ILTGCYDNLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLK 79
H + V A+ +NP G + TG +D ++W A G C + GH + + L
Sbjct: 133 HRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTL- 191
Query: 80 YVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSW 139
VAT S D T +LW ++ E V+ L GH A + S+ T+G+ + +GS+
Sbjct: 192 ---VATGSMDTTAKLWDVESGEEVS---------TLAGHFAEIISLCFNTTGDRLVTGSF 239
Query: 140 DCTISLW 146
D T LW
Sbjct: 240 DHTAILW 246
Score = 66 (28.3 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 107 KKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRT 148
+K F+ L+ H + ++A SG+ +GS+D T +W T
Sbjct: 80 RKFYLFRALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDT 121
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 166 (63.5 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 47/158 (29%), Positives = 76/158 (48%)
Query: 179 ISTLVGHTQCVSSV-VWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNC-IDIGG 236
I +L GHT V SV + +E I + S S+R WD+E K L + KA C +D
Sbjct: 56 IMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHP 115
Query: 237 EGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWH-NKSWFHLISASYDG 295
G +A+G D +++WD R+ G VF++ H+ + ++ + W L SA+ D
Sbjct: 116 YGE-FVASGSQDTNIKLWDIRRKGC---VFRYRGHSQAVRCLRFSPDGKW--LASAADDH 169
Query: 296 KVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGG 333
V LWDL +S H V ++ + +++ G
Sbjct: 170 TVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASG 207
Score = 63 (27.2 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 11/33 (33%), Positives = 20/33 (60%)
Query: 118 HKASVHSIA-AETSGNMVCSGSWDCTISLWRTN 149
H ++V S+ + SG ++ +G DC ++LW N
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSIN 51
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 161 (61.7 bits), Expect = 5.2e-16, Sum P(2) = 5.2e-16
Identities = 46/143 (32%), Positives = 69/143 (48%)
Query: 179 ISTLVGHTQCVSSV-VWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNC-IDIGG 236
I +L GHT V SV + +E I + S S+R WD+E K L + KA C +D
Sbjct: 60 IMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHP 119
Query: 237 EGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWH-NKSWFHLISASYDG 295
G +A+G D +++WD R+ G VF++ H+ + ++ + W L SA+ D
Sbjct: 120 YGE-FVASGSQDTNIKLWDIRRKGC---VFRYRGHSQAVRCLRFSPDGKW--LASAADDH 173
Query: 296 KVMLWDLRTAWPLSVIDSHKDKV 318
V LWDL +S H V
Sbjct: 174 TVKLWDLTAGKMMSEFPGHTGPV 196
Score = 112 (44.5 bits), Expect = 0.00033, P = 0.00033
Identities = 42/140 (30%), Positives = 61/140 (43%)
Query: 10 KAVAPQKEEEPSLHDDWVSA-VDGSNPGFIL-TGCYDNLGRVWKAGGV-CTHILEGHCGA 66
+A A EE H VS+ V G G +L TG D +W C L GH
Sbjct: 10 QAAAVAAVEEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP 69
Query: 67 VSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIA 126
V SV + + L + S+ ++R+W +A +++ + L GHKA++ S+
Sbjct: 70 VESVRLNTPEEL----IVAGSQSGSIRVWDLEAAKIL---------RTLMGHKANICSLD 116
Query: 127 AETSGNMVCSGSWDCTISLW 146
G V SGS D I LW
Sbjct: 117 FHPYGEFVASGSQDTNIKLW 136
Score = 108 (43.1 bits), Expect = 0.00097, P = 0.00097
Identities = 26/106 (24%), Positives = 47/106 (44%)
Query: 234 IGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASY 293
+G L+A GG D + +W KP + + H S + + + + +++ S
Sbjct: 32 LGKASGRLLATGGDDCRVNLWSINKPNC---IMSLTGHTSPVESVRLNTPEEL-IVAGSQ 87
Query: 294 DGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKL 338
G + +WDL A L + HK + D+ G+ V SG D+ +
Sbjct: 88 SGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNI 133
Score = 63 (27.2 bits), Expect = 5.2e-16, Sum P(2) = 5.2e-16
Identities = 11/33 (33%), Positives = 20/33 (60%)
Query: 118 HKASVHSIA-AETSGNMVCSGSWDCTISLWRTN 149
H ++V S+ + SG ++ +G DC ++LW N
Sbjct: 23 HASNVSSLVLGKASGRLLATGGDDCRVNLWSIN 55
>SGD|S000005798 [details] [associations]
symbol:YTM1 "Constituent of 66S pre-ribosomal particles"
species:4932 "Saccharomyces cerevisiae" [GO:0070545 "PeBoW complex"
evidence=IDA;IPI] [GO:0005730 "nucleolus" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0042273 "ribosomal
large subunit biogenesis" evidence=IMP;IPI] [GO:0003674
"molecular_function" evidence=ND] [GO:0051276 "chromosome
organization" evidence=IGI] [GO:0030687 "preribosome, large subunit
precursor" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000005798 GO:GO:0005654 EMBL:BK006948
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0042273 GO:GO:0030687 GO:GO:0051276 GO:GO:0006364
GO:GO:0070545 EMBL:X89633 KO:K00791 RefSeq:NP_014917.3
GeneID:854448 KEGG:sce:YOR274W InterPro:IPR012972 Pfam:PF08154
RefSeq:NP_014915.3 GeneID:854446 KEGG:sce:YOR272W KO:K14863
HOGENOM:HOG000264464 HAMAP:MF_03029 GeneTree:ENSGT00640000091456
OMA:DNSIGFW OrthoDB:EOG4GQTDF EMBL:U92821 EMBL:Z75180 PIR:S67174
ProteinModelPortal:Q12024 SMR:Q12024 DIP:DIP-6484N IntAct:Q12024
MINT:MINT-655357 STRING:Q12024 PaxDb:Q12024 PeptideAtlas:Q12024
EnsemblFungi:YOR272W CYGD:YOR272w NextBio:976700
Genevestigator:Q12024 GermOnline:YOR272W Uniprot:Q12024
Length = 460
Score = 216 (81.1 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 74/263 (28%), Positives = 123/263 (46%)
Query: 110 RSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRT-----------NDSDAAGNQV 158
++ IL GHKA V SI + + + S S+D +I W T D + N++
Sbjct: 199 KTLAILEGHKAPVVSIDV-SDNSRILSASYDNSIGFWSTIYKEMTVVDPLEDINNPNNKI 257
Query: 159 SIKKRKGNN-QVEEPQLEGEA-ISTLVGHTQCVSSVVWPQQE-TI-YSASWDHSVRTWDV 214
S RK +++ + A +S L HT V V++ + T+ YS S DH+++TWD+
Sbjct: 258 STAARKRRKLTMKDGTIRRRAPLSLLESHTAPVEQVIFDSTDNTVGYSVSQDHTIKTWDL 317
Query: 215 EMGKDLSDIFCGKALNCIDIGGEGSA-LIAAGGSDPILRIWDPRKPGTSAPVFQ--FSSH 271
+ + +L + I + L+A G S + + DPR G S+ V Q H
Sbjct: 318 VTARCIDTRTTSYSL--LSIAQLSTLNLLACGSSARHITLHDPRV-GASSKVTQQQLIGH 374
Query: 272 NSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPL--------SVIDSHKDKVLCADW 323
+++S+ ++ + L S S+DG V +WD+R+ P+ SV DKV W
Sbjct: 375 KNFVSSLDTCPENEYILCSGSHDGTVKVWDVRSTSPMYTITREDKSVQKGVNDKVFAVKW 434
Query: 324 WRGDSVISGGVDSKLCVSSGVSI 346
+IS G D K+ ++ G +I
Sbjct: 435 AEKVGIISAGQDKKIQINKGDNI 457
Score = 173 (66.0 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 49/163 (30%), Positives = 76/163 (46%)
Query: 1 EKVLEIEYIKAVAPQKEEEPSLHDDWVSAVD-GSNPGFILTGCYDNLGRVWKAGGVCTHI 59
E L +EY +A+ P ++DWVS++D G I++G YD + R W G
Sbjct: 80 EASLNVEYTRAILPPSYLNSFSNEDWVSSLDVGDGSKHIISGSYDGIVRTWDLSGNVQKQ 139
Query: 60 LEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELV---------NHPKKI- 109
GH G + +V I + L +A D+TLRLWK ++L + ++
Sbjct: 140 YSGHSGPIRAVKYISNTRL-----VSAGNDRTLRLWKTKNDDLKLTSQQQAQEDDDDEVN 194
Query: 110 ----RSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRT 148
++ IL GHKA V SI + + + S S+D +I W T
Sbjct: 195 IEDGKTLAILEGHKAPVVSIDV-SDNSRILSASYDNSIGFWST 236
Score = 117 (46.2 bits), Expect = 0.00050, P = 0.00050
Identities = 56/234 (23%), Positives = 104/234 (44%)
Query: 76 DGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVC 135
DG K++ + S D +R W +L + +K S GH + ++ ++ +V
Sbjct: 113 DGSKHII--SGSYDGIVRTW-----DLSGNVQKQYS-----GHSGPIRAVKYISNTRLVS 160
Query: 136 SGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLE-GEAISTLVGHTQCVSSVVW 194
+G+ D T+ LW+T + D +++ +++ + +E +E G+ ++ L GH V S+
Sbjct: 161 AGN-DRTLRLWKTKNDDL---KLTSQQQAQEDDDDEVNIEDGKTLAILEGHKAPVVSIDV 216
Query: 195 PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIW 254
I SAS+D+S+ W + K+++ + L DI + + A L +
Sbjct: 217 SDNSRILSASYDNSIGFWST-IYKEMTVV---DPLE--DINNPNNKISTAARKRRKLTM- 269
Query: 255 DPRKPGT---SAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTA 305
K GT AP+ SH + + + + S S D + WDL TA
Sbjct: 270 ---KDGTIRRRAPLSLLESHTAPVEQVIFDSTDNTVGYSVSQDHTIKTWDLVTA 320
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 138 (53.6 bits), Expect = 7.4e-15, Sum P(2) = 7.4e-15
Identities = 43/149 (28%), Positives = 71/149 (47%)
Query: 195 PQQETIYSASWDHSVRTWDVEMGKDLSDIFC--GKALNCIDIGGEGSALIAAGGSDPILR 252
P I SAS D +V+ WD + ++ +C G + +D G+ IAA G D ++
Sbjct: 155 PDGRLIVSASDDKTVKLWD-KTSRECVHSYCEHGGFVTYVDFHPSGTC-IAAAGMDNTVK 212
Query: 253 IWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVID 312
+WD R T V + H++ ++A +H S +LI+AS D + + DL L +
Sbjct: 213 VWDTR---THRLVQHYQLHSAAVNALSFH-PSGNYLITASSDSTLKILDLMEGRLLYTLH 268
Query: 313 SHKDKVLCADWWR-GDSVISGGVDSKLCV 340
H+ + R G+ SGG D ++ V
Sbjct: 269 GHQGPATTVAFSRTGEYFASGGSDEQVMV 297
Score = 117 (46.2 bits), Expect = 7.4e-15, Sum P(2) = 7.4e-15
Identities = 41/146 (28%), Positives = 67/146 (45%)
Query: 12 VAPQKEEEPSL------HDDWVSAVDGS-NPGFILTGCYDNLGRVWKAGGVC-THILEGH 63
+A +E+PSL H D V+ VD S N + +G D+ +W + GH
Sbjct: 1 MAAHSQEDPSLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGH 60
Query: 64 CGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVH 123
AV+ VN S L +A+ S+D+T+R+W P + R H A+V
Sbjct: 61 KDAVTCVNFSPSGHL----LASGSRDKTVRIWV---------PNVKGESTVFRAHTATVR 107
Query: 124 SIAAETSGNMVCSGSWDCTISLWRTN 149
S+ + G ++ + S D T+ +W T+
Sbjct: 108 SVHFCSDGQLLVTASDDKTVKVWSTH 133
Score = 98 (39.6 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 38/127 (29%), Positives = 56/127 (44%)
Query: 23 HDDWVSAVDGSNPGFIL-TGCYDNLGRVW--KAGGVCTHILEGHCGAVSSVNIIKSDGLK 79
H D V+ V+ S G +L +G D R+W G T + H V SV+ SDG
Sbjct: 60 HKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGEST-VFRAHTATVRSVHFC-SDGQL 117
Query: 80 YVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSW 139
VT AS D+T+++W H ++ F + + H V G ++ S S
Sbjct: 118 LVT---ASDDKTVKVWS-------THRQRFL-FSLTQ-HINWVRCAKFSPDGRLIVSASD 165
Query: 140 DCTISLW 146
D T+ LW
Sbjct: 166 DKTVKLW 172
Score = 54 (24.1 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 14/49 (28%), Positives = 21/49 (42%)
Query: 106 PKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAA 154
P R FK GH+ +V + + + SGS D T+ +W A
Sbjct: 9 PSLERHFK---GHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRA 54
>TAIR|locus:2176085 [details] [associations]
symbol:AT5G64730 "AT5G64730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 KO:K13124 OMA:CKQGAVR EMBL:AY046038
EMBL:AY113956 IPI:IPI00540873 RefSeq:NP_568993.1 UniGene:At.9776
ProteinModelPortal:Q94AH2 SMR:Q94AH2 PaxDb:Q94AH2 PRIDE:Q94AH2
EnsemblPlants:AT5G64730.1 GeneID:836594 KEGG:ath:AT5G64730
TAIR:At5g64730 InParanoid:Q94AH2 PhylomeDB:Q94AH2
ProtClustDB:CLSN2690079 ArrayExpress:Q94AH2 Genevestigator:Q94AH2
Uniprot:Q94AH2
Length = 299
Score = 204 (76.9 bits), Expect = 8.2e-15, P = 8.2e-15
Identities = 86/301 (28%), Positives = 138/301 (45%)
Query: 58 HILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELV----NHPKKIRSFK 113
HIL+GH GAV + DG Y T KD+T+RLW L+ +H +++R
Sbjct: 12 HILKGHEGAVLAARF-NGDG-NYAL--TCGKDRTIRLWNPHRGILIKTYKSHGREVRDVH 67
Query: 114 ILRGHKASVHSIAAE--------TSGNMVCS-GSWDCTISLWRTNDSDA----AGNQVSI 160
+ + A S + ++G ++ D ++ + NDS + AG S+
Sbjct: 68 VTSDN-AKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSL 126
Query: 161 KKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDL 220
+ + EP + I T + V SVV + E I S D +VRT+D+ +G+++
Sbjct: 127 RVWDCRSHSVEPV---QIIDTFL---DTVMSVVLTKTEII-GGSVDGTVRTFDMRIGREM 179
Query: 221 SDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKW 280
SD G+ +NCI I +G+ ++A G D LR+ D R G V++ S+ + C
Sbjct: 180 SDNL-GQPVNCISISNDGNCVLA-GCLDSTLRLLD-RTTGELLQVYKGHISKSFKTDCCL 236
Query: 281 HNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWW-RGDSVISGGVDSKLC 339
N H+I S DG V WDL A LS +H V + + D +++ VD +
Sbjct: 237 TNSD-AHVIGGSEDGLVFFWDLVDAKVLSKFRAHDLVVTSVSYHPKEDCMLTSSVDGTIR 295
Query: 340 V 340
V
Sbjct: 296 V 296
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 213 (80.0 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 86/301 (28%), Positives = 134/301 (44%)
Query: 23 HDDWVSAVDGSNPGFILTGCYDNLGRVWKA-GGVCTHILEGHCGAVSSVNIIKSDGLKYV 81
HDD V I++G DN +VW A G C L GH G V S + D +
Sbjct: 301 HDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQM--RDNI--- 355
Query: 82 TVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDC 141
+ + S D+TL++W + E ++ L GH ++V + V SGS D
Sbjct: 356 -IISGSTDRTLKVWNAETGECIH---------TLYGHTSTVRCMHLHEK--RVVSGSRDA 403
Query: 142 TISLWRTNDSDAA----GNQVSIK--KRKGNNQVE----------EPQLEGEAISTLVGH 185
T+ +W G+ +++ + G V +P+ E + TL GH
Sbjct: 404 TLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETE-TCLHTLQGH 462
Query: 186 TQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGE-GSALIAA 244
T V S+ + + S S D S+R WDVE G + + ++L G E ++ +
Sbjct: 463 TNRVYSLQFDGIHVV-SGSLDTSIRVWDVETGNCIHTLTGHQSLTS---GMELKDNILVS 518
Query: 245 GGSDPILRIWDPRKPGTSAPVFQF-SSHNSWISACKWHNKSWFHLISASYDGKVMLWDLR 303
G +D ++IWD K G Q S H S ++ C NK++ +I++S DG V LWDL+
Sbjct: 519 GNADSTVKIWDI-KTGQCLQTLQGPSKHQSAVT-CLQFNKNF--VITSSDDGTVKLWDLK 574
Query: 304 T 304
T
Sbjct: 575 T 575
Score = 180 (68.4 bits), Expect = 6.6e-11, P = 6.6e-11
Identities = 64/247 (25%), Positives = 113/247 (45%)
Query: 108 KIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLW--------RTNDSDAAG---N 156
++RS K+L+GH V + + GN + SGS D T+ +W RT G +
Sbjct: 291 ELRSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSS 349
Query: 157 QVS---IKKRKGNNQVEEPQLE-GEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTW 212
Q+ I + ++ E GE I TL GHT V + ++ + S S D ++R W
Sbjct: 350 QMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVV-SGSRDATLRVW 408
Query: 213 DVEMGKDLSDIFCGK--ALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSS 270
D+E G+ L + G A+ C+ G + +G D ++++WDP T +
Sbjct: 409 DIETGQCLH-VLMGHVAAVRCVQYDGRR---VVSGAYDFMVKVWDPE---TETCLHTLQG 461
Query: 271 HNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSV- 329
H + + + ++ H++S S D + +WD+ T + + H+ L + D++
Sbjct: 462 HTNRVYSLQFDG---IHVVSGSLDTSIRVWDVETGNCIHTLTGHQS--LTSGMELKDNIL 516
Query: 330 ISGGVDS 336
+SG DS
Sbjct: 517 VSGNADS 523
Score = 148 (57.2 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 74/311 (23%), Positives = 132/311 (42%)
Query: 35 PGFILT---GCYDNLGRV---WKAGGVCT-HILEGHCGAVSSVNIIKSDGLKYVTVATAS 87
PGFI + Y R+ W+ G + + +L+GH V + ++ G + V+ S
Sbjct: 266 PGFIHSPWKSAYIRQHRIDTNWRRGELRSPKVLKGHDDHV--ITCLQFCGNRIVS---GS 320
Query: 88 KDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWR 147
D TL++W V K +R+ L GH V S ++ N++ SGS D T+ +W
Sbjct: 321 DDNTLKVWS-----AVTG-KCLRT---LVGHTGGVWS--SQMRDNIIISGSTDRTLKVWN 369
Query: 148 TNDSDAA----GNQVSIK------KR--KGNNQ--VEEPQLE-GEAISTLVGHTQCVSSV 192
+ G+ +++ KR G+ + +E G+ + L+GH V V
Sbjct: 370 AETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCV 429
Query: 193 VWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILR 252
+ + + S ++D V+ WD E L + G + +G +++ G D +R
Sbjct: 430 QYDGRRVV-SGAYDFMVKVWDPETETCLHTLQ-GHTNRVYSLQFDGIHVVS-GSLDTSIR 486
Query: 253 IWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVID 312
+WD T + + H S S + + L+S + D V +WD++T L +
Sbjct: 487 VWDVE---TGNCIHTLTGHQSLTSGMELKDNI---LVSGNADSTVKIWDIKTGQCLQTLQ 540
Query: 313 S---HKDKVLC 320
H+ V C
Sbjct: 541 GPSKHQSAVTC 551
Score = 141 (54.7 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 42/169 (24%), Positives = 78/169 (46%)
Query: 176 GEAISTLVGHTQCVSSVVWPQQ---ETIYSASWDHSVRTWDVEMGKDLSDIFCGKA-LNC 231
G+ + TLVGHT VW Q I S S D +++ W+ E G+ + ++ + + C
Sbjct: 333 GKCLRTLVGHT----GGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRC 388
Query: 232 IDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291
+ + + + +G D LR+WD T + H + + ++ + ++S
Sbjct: 389 MHLHEKR---VVSGSRDATLRVWDIE---TGQCLHVLMGHVAAVRCVQYDGR---RVVSG 439
Query: 292 SYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGGVDSKLCV 340
+YD V +WD T L + H ++V + G V+SG +D+ + V
Sbjct: 440 AYDFMVKVWDPETETCLHTLQGHTNRVYSLQF-DGIHVVSGSLDTSIRV 487
Score = 49 (22.3 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 13/48 (27%), Positives = 25/48 (52%)
Query: 91 TLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGS 138
TL++ + + ++H ++RSF + G K S T+G + CS +
Sbjct: 82 TLKMIFYKMKRKLDHGSEVRSFSL--GKKPCKVSDYTSTTGLVPCSAT 127
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 213 (80.0 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 86/301 (28%), Positives = 134/301 (44%)
Query: 23 HDDWVSAVDGSNPGFILTGCYDNLGRVWKA-GGVCTHILEGHCGAVSSVNIIKSDGLKYV 81
HDD V I++G DN +VW A G C L GH G V S + D +
Sbjct: 301 HDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQM--RDNI--- 355
Query: 82 TVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDC 141
+ + S D+TL++W + E ++ L GH ++V + V SGS D
Sbjct: 356 -IISGSTDRTLKVWNAETGECIH---------TLYGHTSTVRCMHLHEK--RVVSGSRDA 403
Query: 142 TISLWRTNDSDAA----GNQVSIK--KRKGNNQVE----------EPQLEGEAISTLVGH 185
T+ +W G+ +++ + G V +P+ E + TL GH
Sbjct: 404 TLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETE-TCLHTLQGH 462
Query: 186 TQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGE-GSALIAA 244
T V S+ + + S S D S+R WDVE G + + ++L G E ++ +
Sbjct: 463 TNRVYSLQFDGIHVV-SGSLDTSIRVWDVETGNCIHTLTGHQSLTS---GMELKDNILVS 518
Query: 245 GGSDPILRIWDPRKPGTSAPVFQF-SSHNSWISACKWHNKSWFHLISASYDGKVMLWDLR 303
G +D ++IWD K G Q S H S ++ C NK++ +I++S DG V LWDL+
Sbjct: 519 GNADSTVKIWDI-KTGQCLQTLQGPSKHQSAVT-CLQFNKNF--VITSSDDGTVKLWDLK 574
Query: 304 T 304
T
Sbjct: 575 T 575
Score = 177 (67.4 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 63/247 (25%), Positives = 113/247 (45%)
Query: 108 KIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLW--------RTNDSDAAG---N 156
+++S K+L+GH V + + GN + SGS D T+ +W RT G +
Sbjct: 291 ELKSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSS 349
Query: 157 QVS---IKKRKGNNQVEEPQLE-GEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTW 212
Q+ I + ++ E GE I TL GHT V + ++ + S S D ++R W
Sbjct: 350 QMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVV-SGSRDATLRVW 408
Query: 213 DVEMGKDLSDIFCGK--ALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSS 270
D+E G+ L + G A+ C+ G + +G D ++++WDP T +
Sbjct: 409 DIETGQCLH-VLMGHVAAVRCVQYDGRR---VVSGAYDFMVKVWDPE---TETCLHTLQG 461
Query: 271 HNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSV- 329
H + + + ++ H++S S D + +WD+ T + + H+ L + D++
Sbjct: 462 HTNRVYSLQFDG---IHVVSGSLDTSIRVWDVETGNCIHTLTGHQS--LTSGMELKDNIL 516
Query: 330 ISGGVDS 336
+SG DS
Sbjct: 517 VSGNADS 523
Score = 148 (57.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 74/311 (23%), Positives = 132/311 (42%)
Query: 35 PGFILT---GCYDNLGRV---WKAGGVCT-HILEGHCGAVSSVNIIKSDGLKYVTVATAS 87
PGFI + Y R+ W+ G + + +L+GH V + ++ G + V+ S
Sbjct: 266 PGFIHSPWKSAYIRQHRIDTNWRRGELKSPKVLKGHDDHV--ITCLQFCGNRIVS---GS 320
Query: 88 KDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWR 147
D TL++W V K +R+ L GH V S ++ N++ SGS D T+ +W
Sbjct: 321 DDNTLKVWS-----AVTG-KCLRT---LVGHTGGVWS--SQMRDNIIISGSTDRTLKVWN 369
Query: 148 TNDSDAA----GNQVSIK------KR--KGNNQ--VEEPQLE-GEAISTLVGHTQCVSSV 192
+ G+ +++ KR G+ + +E G+ + L+GH V V
Sbjct: 370 AETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCV 429
Query: 193 VWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILR 252
+ + + S ++D V+ WD E L + G + +G +++ G D +R
Sbjct: 430 QYDGRRVV-SGAYDFMVKVWDPETETCLHTLQ-GHTNRVYSLQFDGIHVVS-GSLDTSIR 486
Query: 253 IWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVID 312
+WD T + + H S S + + L+S + D V +WD++T L +
Sbjct: 487 VWDVE---TGNCIHTLTGHQSLTSGMELKDNI---LVSGNADSTVKIWDIKTGQCLQTLQ 540
Query: 313 S---HKDKVLC 320
H+ V C
Sbjct: 541 GPSKHQSAVTC 551
Score = 141 (54.7 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 42/169 (24%), Positives = 78/169 (46%)
Query: 176 GEAISTLVGHTQCVSSVVWPQQ---ETIYSASWDHSVRTWDVEMGKDLSDIFCGKA-LNC 231
G+ + TLVGHT VW Q I S S D +++ W+ E G+ + ++ + + C
Sbjct: 333 GKCLRTLVGHT----GGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRC 388
Query: 232 IDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291
+ + + + +G D LR+WD T + H + + ++ + ++S
Sbjct: 389 MHLHEKR---VVSGSRDATLRVWDIE---TGQCLHVLMGHVAAVRCVQYDGR---RVVSG 439
Query: 292 SYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGGVDSKLCV 340
+YD V +WD T L + H ++V + G V+SG +D+ + V
Sbjct: 440 AYDFMVKVWDPETETCLHTLQGHTNRVYSLQF-DGIHVVSGSLDTSIRV 487
Score = 49 (22.3 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 13/48 (27%), Positives = 25/48 (52%)
Query: 91 TLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGS 138
TL++ + + ++H ++RSF + G K S T+G + CS +
Sbjct: 82 TLKMIFYKMKRKLDHGSEVRSFSL--GKKPCKVSDYTSTTGLVPCSAT 127
>POMBASE|SPAC664.15 [details] [associations]
symbol:caf4 "CCR4-Not complex subunit Caf4/Mdv1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000002
"mitochondrial genome maintenance" evidence=ISO] [GO:0000266
"mitochondrial fission" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005741 "mitochondrial outer membrane"
evidence=ISO] [GO:0006354 "DNA-dependent transcription, elongation"
evidence=IC] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0030014 "CCR4-NOT complex"
evidence=ISO] [GO:0030015 "CCR4-NOT core complex" evidence=NAS]
[GO:0051020 "GTPase binding" evidence=NAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPAC664.15 EMBL:CU329670
GO:GO:0006355 GenomeReviews:CU329670_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005741
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000002
GO:GO:0030015 OrthoDB:EOG469V30 GO:GO:0000266 GO:GO:0006354
GO:GO:0051020 OMA:CVQTLDV PIR:T50245 PIR:T50289
RefSeq:XP_001713057.1 ProteinModelPortal:Q9P7I3 STRING:Q9P7I3
EnsemblFungi:SPAC664.15.1 GeneID:3361526 KEGG:spo:SPAC664.15
NextBio:20811568 Uniprot:Q9P7I3
Length = 651
Score = 212 (79.7 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 86/332 (25%), Positives = 151/332 (45%)
Query: 10 KAVAPQKEEEPSLHDDWVSAVDGSNPGFILT--GCYDNLGRVWKAGGVCTHILEGHCGAV 67
+A++P + PS + VS N F ++ + + G + + H +
Sbjct: 278 RAISP-RAPRPSTASEVVSDYFEQNSAFSKAPENTESSVNQNYIVGNLVKQF-QAHSEYI 335
Query: 68 SSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAA 127
+S++ G T+ATAS D+T+++W D +V + S L+GH V +A
Sbjct: 336 TSLDFSHPFG----TLATASTDKTVKVW--DMAGVVY----LGS---LKGHSDYVSCLAI 382
Query: 128 ETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQ 187
+ S + +GS D T+ LW D+D +++ N+ ++P A + L HT
Sbjct: 383 QDS--FIATGSMDTTVRLWNL-DNDVLHKDNPVEESL-NSPPDQPV--DNATNVLTSHTA 436
Query: 188 CVSSVVWPQQETIYSASWDHSVRTWDVEMGK-----D---------------LSDIFCG- 226
V+++ + + + + D +VR WD+ G+ D +SD +
Sbjct: 437 PVTALALSSDDVLITGADDKTVRQWDIVTGRCIQTLDFVWAETHDTSTSQILVSDTYKQE 496
Query: 227 ---KALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNK 283
+AL+C+D A +A+G D ++RIWD R PV F H + IS+ ++ +
Sbjct: 497 PFIRALDCLD------AAVASGTVDGLIRIWDLR---IGLPVRSFIGHTAPISSLQFDSN 547
Query: 284 SWFHLISASYDGKVMLWDLRTAWPLSVIDSHK 315
HL S SYD V +WDLR+ P+++I K
Sbjct: 548 ---HLYSGSYDNSVRIWDLRSGSPINIIPMEK 576
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 143 (55.4 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 43/149 (28%), Positives = 72/149 (48%)
Query: 195 PQQETIYSASWDHSVRTWDVEMGKDLSDIFC--GKALNCIDIGGEGSALIAAGGSDPILR 252
P I SAS D +V+ WD + ++ FC G N ++ G+ IAA G+D ++
Sbjct: 156 PDGRLIASASDDKTVKLWD-KTSRECIHSFCEHGGFANHVEFHPSGTC-IAAAGTDKTVK 213
Query: 253 IWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVID 312
+WD R + + + H + +++ +H S +LI+AS D + + DL L +
Sbjct: 214 VWDVRM---NRLLQHYQVHTAAVNSLSFH-PSGNYLITASNDSTLKILDLLEGRLLYTLH 269
Query: 313 SHKDKVLCADWWR-GDSVISGGVDSKLCV 340
H+ C + R GD SGG D ++ V
Sbjct: 270 GHQGPATCVAFSRTGDFFASGGSDEQVMV 298
Score = 107 (42.7 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 40/138 (28%), Positives = 63/138 (45%)
Query: 17 EEEPSL------HDDWVSAVDGS-NPGFILTGCYDNLGRVWKAGG-VCTHILEGHCGAVS 68
EE+PSL H D +++VD S N + +G D+ ++W + + L GH AV
Sbjct: 7 EEDPSLERHFRGHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVM 66
Query: 69 SVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAE 128
V S L VA+ S+D+T+ LW P + + H A+V S+
Sbjct: 67 CVQFSPSGHL----VASGSRDKTVCLWV---------PSVKGESTVFKAHTATVRSVHFS 113
Query: 129 TSGNMVCSGSWDCTISLW 146
+ G + + S D TI +W
Sbjct: 114 SDGQSLVTASDDKTIKVW 131
Score = 89 (36.4 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 38/127 (29%), Positives = 54/127 (42%)
Query: 23 HDDWVSAVDGSNPGFIL-TGCYDNLGRVW--KAGGVCTHILEGHCGAVSSVNIIKSDGLK 79
H D V V S G ++ +G D +W G T + + H V SV+ SDG
Sbjct: 61 HKDAVMCVQFSPSGHLVASGSRDKTVCLWVPSVKGEST-VFKAHTATVRSVHF-SSDGQS 118
Query: 80 YVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSW 139
VT AS D+T+++W V+ K + S L H V G ++ S S
Sbjct: 119 LVT---ASDDKTIKVWT------VHRQKFLFS---LSQHINWVRCARFSPDGRLIASASD 166
Query: 140 DCTISLW 146
D T+ LW
Sbjct: 167 DKTVKLW 173
Score = 62 (26.9 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 19/72 (26%), Positives = 35/72 (48%)
Query: 185 HTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKA-LNCIDIGGEGSALI 242
HT V+S+ + P + +AS D +++ D+ G+ L + + C+ G
Sbjct: 229 HTAAVNSLSFHPSGNYLITASNDSTLKILDLLEGRLLYTLHGHQGPATCVAFSRTGD-FF 287
Query: 243 AAGGSDPILRIW 254
A+GGSD + +W
Sbjct: 288 ASGGSDEQVMVW 299
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 210 (79.0 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 85/301 (28%), Positives = 134/301 (44%)
Query: 23 HDDWVSAVDGSNPGFILTGCYDNLGRVWKA-GGVCTHILEGHCGAVSSVNIIKSDGLKYV 81
HDD V I++G DN +VW A G C L GH G V S + D +
Sbjct: 259 HDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQM--RDNI--- 313
Query: 82 TVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDC 141
+ + S D+TL++W + E ++ L GH ++V + V SGS D
Sbjct: 314 -IISGSTDRTLKVWNAETGECIH---------TLYGHTSTVRCMHLHEK--RVVSGSRDA 361
Query: 142 TISLWRTNDSDAA----GNQVSIK--KRKGNNQVE----------EPQLEGEAISTLVGH 185
T+ +W G+ +++ + G V +P+ E + TL GH
Sbjct: 362 TLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETE-TCLHTLQGH 420
Query: 186 TQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGE-GSALIAA 244
T V S+ + + S S D S+R WDVE G + + ++L G E ++ +
Sbjct: 421 TNRVYSLQFDGIHVV-SGSLDTSIRVWDVETGNCIHTLTGHQSLTS---GMELKDNILVS 476
Query: 245 GGSDPILRIWDPRKPGTSAPVFQF-SSHNSWISACKWHNKSWFHLISASYDGKVMLWDLR 303
G +D ++IWD K G Q + H S ++ C NK++ +I++S DG V LWDL+
Sbjct: 477 GNADSTVKIWDI-KTGQCLQTLQGPNKHQSAVT-CLQFNKNF--VITSSDDGTVKLWDLK 532
Query: 304 T 304
T
Sbjct: 533 T 533
Score = 177 (67.4 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 63/247 (25%), Positives = 113/247 (45%)
Query: 108 KIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLW--------RTNDSDAAG---N 156
+++S K+L+GH V + + GN + SGS D T+ +W RT G +
Sbjct: 249 ELKSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSS 307
Query: 157 QVS---IKKRKGNNQVEEPQLE-GEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTW 212
Q+ I + ++ E GE I TL GHT V + ++ + S S D ++R W
Sbjct: 308 QMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVV-SGSRDATLRVW 366
Query: 213 DVEMGKDLSDIFCGK--ALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSS 270
D+E G+ L + G A+ C+ G + +G D ++++WDP T +
Sbjct: 367 DIETGQCLH-VLMGHVAAVRCVQYDGRR---VVSGAYDFMVKVWDPE---TETCLHTLQG 419
Query: 271 HNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSV- 329
H + + + ++ H++S S D + +WD+ T + + H+ L + D++
Sbjct: 420 HTNRVYSLQFDG---IHVVSGSLDTSIRVWDVETGNCIHTLTGHQS--LTSGMELKDNIL 474
Query: 330 ISGGVDS 336
+SG DS
Sbjct: 475 VSGNADS 481
Score = 149 (57.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 74/311 (23%), Positives = 133/311 (42%)
Query: 35 PGFILT---GCYDNLGRV---WKAGGVCT-HILEGHCGAVSSVNIIKSDGLKYVTVATAS 87
PGFI + Y R+ W+ G + + +L+GH V + ++ G + V+ S
Sbjct: 224 PGFIHSPWKSAYIRQHRIDTNWRRGELKSPKVLKGHDDHV--ITCLQFCGNRIVS---GS 278
Query: 88 KDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWR 147
D TL++W V K +R+ L GH V S ++ N++ SGS D T+ +W
Sbjct: 279 DDNTLKVWS-----AVTG-KCLRT---LVGHTGGVWS--SQMRDNIIISGSTDRTLKVWN 327
Query: 148 TNDSDAA----GNQVSIK------KR--KGNNQ--VEEPQLE-GEAISTLVGHTQCVSSV 192
+ G+ +++ KR G+ + +E G+ + L+GH V V
Sbjct: 328 AETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCV 387
Query: 193 VWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILR 252
+ + + S ++D V+ WD E L + G + +G +++ G D +R
Sbjct: 388 QYDGRRVV-SGAYDFMVKVWDPETETCLHTLQ-GHTNRVYSLQFDGIHVVS-GSLDTSIR 444
Query: 253 IWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVI- 311
+WD T + + H S S + + L+S + D V +WD++T L +
Sbjct: 445 VWDVE---TGNCIHTLTGHQSLTSGMELKDNI---LVSGNADSTVKIWDIKTGQCLQTLQ 498
Query: 312 --DSHKDKVLC 320
+ H+ V C
Sbjct: 499 GPNKHQSAVTC 509
Score = 141 (54.7 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 42/169 (24%), Positives = 78/169 (46%)
Query: 176 GEAISTLVGHTQCVSSVVWPQQ---ETIYSASWDHSVRTWDVEMGKDLSDIFCGKA-LNC 231
G+ + TLVGHT VW Q I S S D +++ W+ E G+ + ++ + + C
Sbjct: 291 GKCLRTLVGHT----GGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRC 346
Query: 232 IDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291
+ + + + +G D LR+WD T + H + + ++ + ++S
Sbjct: 347 MHLHEKR---VVSGSRDATLRVWDIE---TGQCLHVLMGHVAAVRCVQYDGR---RVVSG 397
Query: 292 SYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGGVDSKLCV 340
+YD V +WD T L + H ++V + G V+SG +D+ + V
Sbjct: 398 AYDFMVKVWDPETETCLHTLQGHTNRVYSLQF-DGIHVVSGSLDTSIRV 445
Score = 49 (22.3 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 13/48 (27%), Positives = 25/48 (52%)
Query: 91 TLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGS 138
TL++ + + ++H ++RSF + G K S T+G + CS +
Sbjct: 40 TLKMIFYKMKRKLDHGSEVRSFSL--GKKPCKVSEYTSTTGLVPCSAT 85
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 210 (79.0 bits), Expect = 2.6e-14, P = 2.6e-14
Identities = 85/301 (28%), Positives = 134/301 (44%)
Query: 23 HDDWVSAVDGSNPGFILTGCYDNLGRVWKA-GGVCTHILEGHCGAVSSVNIIKSDGLKYV 81
HDD V I++G DN +VW A G C L GH G V S + D +
Sbjct: 299 HDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQM--RDNI--- 353
Query: 82 TVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDC 141
+ + S D+TL++W + E ++ L GH ++V + V SGS D
Sbjct: 354 -IISGSTDRTLKVWNAETGECIH---------TLYGHTSTVRCMHLHEK--RVVSGSRDA 401
Query: 142 TISLWRTNDSDAA----GNQVSIK--KRKGNNQVE----------EPQLEGEAISTLVGH 185
T+ +W G+ +++ + G V +P+ E + TL GH
Sbjct: 402 TLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETE-TCLHTLQGH 460
Query: 186 TQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGE-GSALIAA 244
T V S+ + + S S D S+R WDVE G + + ++L G E ++ +
Sbjct: 461 TNRVYSLQFDGIHVV-SGSLDTSIRVWDVETGNCIHTLTGHQSLTS---GMELKDNILVS 516
Query: 245 GGSDPILRIWDPRKPGTSAPVFQF-SSHNSWISACKWHNKSWFHLISASYDGKVMLWDLR 303
G +D ++IWD K G Q + H S ++ C NK++ +I++S DG V LWDL+
Sbjct: 517 GNADSTVKIWDI-KTGQCLQTLQGPNKHQSAVT-CLQFNKNF--VITSSDDGTVKLWDLK 572
Query: 304 T 304
T
Sbjct: 573 T 573
Score = 177 (67.4 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 63/247 (25%), Positives = 113/247 (45%)
Query: 108 KIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLW--------RTNDSDAAG---N 156
+++S K+L+GH V + + GN + SGS D T+ +W RT G +
Sbjct: 289 ELKSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSS 347
Query: 157 QVS---IKKRKGNNQVEEPQLE-GEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTW 212
Q+ I + ++ E GE I TL GHT V + ++ + S S D ++R W
Sbjct: 348 QMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVV-SGSRDATLRVW 406
Query: 213 DVEMGKDLSDIFCGK--ALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSS 270
D+E G+ L + G A+ C+ G + +G D ++++WDP T +
Sbjct: 407 DIETGQCLH-VLMGHVAAVRCVQYDGRR---VVSGAYDFMVKVWDPE---TETCLHTLQG 459
Query: 271 HNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSV- 329
H + + + ++ H++S S D + +WD+ T + + H+ L + D++
Sbjct: 460 HTNRVYSLQFDG---IHVVSGSLDTSIRVWDVETGNCIHTLTGHQS--LTSGMELKDNIL 514
Query: 330 ISGGVDS 336
+SG DS
Sbjct: 515 VSGNADS 521
Score = 149 (57.5 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 74/311 (23%), Positives = 133/311 (42%)
Query: 35 PGFILT---GCYDNLGRV---WKAGGVCT-HILEGHCGAVSSVNIIKSDGLKYVTVATAS 87
PGFI + Y R+ W+ G + + +L+GH V + ++ G + V+ S
Sbjct: 264 PGFIHSPWKSAYIRQHRIDTNWRRGELKSPKVLKGHDDHV--ITCLQFCGNRIVS---GS 318
Query: 88 KDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWR 147
D TL++W V K +R+ L GH V S ++ N++ SGS D T+ +W
Sbjct: 319 DDNTLKVWS-----AVTG-KCLRT---LVGHTGGVWS--SQMRDNIIISGSTDRTLKVWN 367
Query: 148 TNDSDAA----GNQVSIK------KR--KGNNQ--VEEPQLE-GEAISTLVGHTQCVSSV 192
+ G+ +++ KR G+ + +E G+ + L+GH V V
Sbjct: 368 AETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCV 427
Query: 193 VWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILR 252
+ + + S ++D V+ WD E L + G + +G +++ G D +R
Sbjct: 428 QYDGRRVV-SGAYDFMVKVWDPETETCLHTLQ-GHTNRVYSLQFDGIHVVS-GSLDTSIR 484
Query: 253 IWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVI- 311
+WD T + + H S S + + L+S + D V +WD++T L +
Sbjct: 485 VWDVE---TGNCIHTLTGHQSLTSGMELKDNI---LVSGNADSTVKIWDIKTGQCLQTLQ 538
Query: 312 --DSHKDKVLC 320
+ H+ V C
Sbjct: 539 GPNKHQSAVTC 549
Score = 141 (54.7 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 42/169 (24%), Positives = 78/169 (46%)
Query: 176 GEAISTLVGHTQCVSSVVWPQQ---ETIYSASWDHSVRTWDVEMGKDLSDIFCGKA-LNC 231
G+ + TLVGHT VW Q I S S D +++ W+ E G+ + ++ + + C
Sbjct: 331 GKCLRTLVGHT----GGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRC 386
Query: 232 IDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291
+ + + + +G D LR+WD T + H + + ++ + ++S
Sbjct: 387 MHLHEKR---VVSGSRDATLRVWDIE---TGQCLHVLMGHVAAVRCVQYDGR---RVVSG 437
Query: 292 SYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGGVDSKLCV 340
+YD V +WD T L + H ++V + G V+SG +D+ + V
Sbjct: 438 AYDFMVKVWDPETETCLHTLQGHTNRVYSLQF-DGIHVVSGSLDTSIRV 485
Score = 49 (22.3 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 13/48 (27%), Positives = 25/48 (52%)
Query: 91 TLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGS 138
TL++ + + ++H ++RSF + G K S T+G + CS +
Sbjct: 80 TLKMIFYKMKRKLDHGSEVRSFSL--GKKPCKVSEYTSTTGLVPCSAT 125
>ZFIN|ZDB-GENE-090313-79 [details] [associations]
symbol:fbxw7 "F-box and WD repeat domain containing
7" species:7955 "Danio rerio" [GO:0045746 "negative regulation of
Notch signaling pathway" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-090313-79 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001525 SUPFAM:SSF81383 GO:GO:0045746
GeneTree:ENSGT00690000101849 EMBL:AL953881 IPI:IPI00499035
Ensembl:ENSDART00000086512 Bgee:F1RCB5 Uniprot:F1RCB5
Length = 760
Score = 211 (79.3 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 86/301 (28%), Positives = 133/301 (44%)
Query: 23 HDDWVSAVDGSNPGFILTGCYDNLGRVWKA-GGVCTHILEGHCGAVSSVNIIKSDGLKYV 81
HDD V I++G DN +VW A G C L GH G V S + D +
Sbjct: 432 HDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQM--RDNI--- 486
Query: 82 TVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDC 141
+ + S D+TL++W + E ++ L GH ++V + V SGS D
Sbjct: 487 -IISGSTDRTLKVWNAETGECIH---------TLYGHTSTVRCMHLHEK--RVVSGSRDA 534
Query: 142 TISLWRTNDSDAA----GNQVSIK--KRKGNNQVE----------EPQLEGEAISTLVGH 185
T+ +W G+ +++ + G V +P+ E + TL GH
Sbjct: 535 TLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETE-TCLHTLQGH 593
Query: 186 TQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGE-GSALIAA 244
T V S+ + + S S D S+R WDVE G + + ++L G E ++ +
Sbjct: 594 TNRVYSLQFDGIHVV-SGSLDTSIRVWDVETGNCIHTLTGHQSLTS---GMELKDNILVS 649
Query: 245 GGSDPILRIWDPRKPGTSAPVFQFS-SHNSWISACKWHNKSWFHLISASYDGKVMLWDLR 303
G +D ++IWD K G Q H S ++ C NK++ +I++S DG V LWDLR
Sbjct: 650 GNADSTVKIWDI-KTGQCLQTLQGPHKHQSAVT-CLQFNKNF--VITSSDDGTVKLWDLR 705
Query: 304 T 304
T
Sbjct: 706 T 706
Score = 176 (67.0 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 63/246 (25%), Positives = 112/246 (45%)
Query: 109 IRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLW--------RTNDSDAAG---NQ 157
++S K+L+GH V + + GN + SGS D T+ +W RT G +Q
Sbjct: 423 LKSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQ 481
Query: 158 VS---IKKRKGNNQVEEPQLE-GEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWD 213
+ I + ++ E GE I TL GHT V + ++ + S S D ++R WD
Sbjct: 482 MRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVV-SGSRDATLRVWD 540
Query: 214 VEMGKDLSDIFCGK--ALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSH 271
+E G+ L + G A+ C+ G + +G D ++++WDP T + H
Sbjct: 541 IETGQCLH-VLMGHVAAVRCVQYDGRR---VVSGAYDFMVKVWDPE---TETCLHTLQGH 593
Query: 272 NSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSV-I 330
+ + + ++ H++S S D + +WD+ T + + H+ L + D++ +
Sbjct: 594 TNRVYSLQFDG---IHVVSGSLDTSIRVWDVETGNCIHTLTGHQS--LTSGMELKDNILV 648
Query: 331 SGGVDS 336
SG DS
Sbjct: 649 SGNADS 654
Score = 146 (56.5 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 68/290 (23%), Positives = 124/290 (42%)
Query: 50 WKAGGVCT-HILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKK 108
W+ G + + +L+GH V + ++ G + V+ S D TL++W V K
Sbjct: 418 WRRGDLKSPKVLKGHDDHV--ITCLQFCGNRIVS---GSDDNTLKVWS-----AVTG-KC 466
Query: 109 IRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAA----GNQVSIK--- 161
+R+ L GH V S ++ N++ SGS D T+ +W + G+ +++
Sbjct: 467 LRT---LVGHTGGVWS--SQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMH 521
Query: 162 ---KR--KGNNQ--VEEPQLE-GEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWD 213
KR G+ + +E G+ + L+GH V V + + + S ++D V+ WD
Sbjct: 522 LHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV-SGAYDFMVKVWD 580
Query: 214 VEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNS 273
E L + G + +G +++ G D +R+WD T + + H S
Sbjct: 581 PETETCLHTLQ-GHTNRVYSLQFDGIHVVS-GSLDTSIRVWDVE---TGNCIHTLTGHQS 635
Query: 274 WISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDS---HKDKVLC 320
S + + L+S + D V +WD++T L + H+ V C
Sbjct: 636 LTSGMELKDNI---LVSGNADSTVKIWDIKTGQCLQTLQGPHKHQSAVTC 682
Score = 141 (54.7 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 42/169 (24%), Positives = 78/169 (46%)
Query: 176 GEAISTLVGHTQCVSSVVWPQQ---ETIYSASWDHSVRTWDVEMGKDLSDIFCGKA-LNC 231
G+ + TLVGHT VW Q I S S D +++ W+ E G+ + ++ + + C
Sbjct: 464 GKCLRTLVGHT----GGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRC 519
Query: 232 IDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291
+ + + + +G D LR+WD T + H + + ++ + ++S
Sbjct: 520 MHLHEKR---VVSGSRDATLRVWDIE---TGQCLHVLMGHVAAVRCVQYDGR---RVVSG 570
Query: 292 SYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGGVDSKLCV 340
+YD V +WD T L + H ++V + G V+SG +D+ + V
Sbjct: 571 AYDFMVKVWDPETETCLHTLQGHTNRVYSLQF-DGIHVVSGSLDTSIRV 618
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 210 (79.0 bits), Expect = 3.2e-14, P = 3.2e-14
Identities = 85/301 (28%), Positives = 134/301 (44%)
Query: 23 HDDWVSAVDGSNPGFILTGCYDNLGRVWKA-GGVCTHILEGHCGAVSSVNIIKSDGLKYV 81
HDD V I++G DN +VW A G C L GH G V S + D +
Sbjct: 379 HDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQM--RDNI--- 433
Query: 82 TVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDC 141
+ + S D+TL++W + E ++ L GH ++V + V SGS D
Sbjct: 434 -IISGSTDRTLKVWNAETGECIH---------TLYGHTSTVRCMHLHEK--RVVSGSRDA 481
Query: 142 TISLWRTNDSDAA----GNQVSIK--KRKGNNQVE----------EPQLEGEAISTLVGH 185
T+ +W G+ +++ + G V +P+ E + TL GH
Sbjct: 482 TLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETE-TCLHTLQGH 540
Query: 186 TQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGE-GSALIAA 244
T V S+ + + S S D S+R WDVE G + + ++L G E ++ +
Sbjct: 541 TNRVYSLQFDGIHVV-SGSLDTSIRVWDVETGNCIHTLTGHQSLTS---GMELKDNILVS 596
Query: 245 GGSDPILRIWDPRKPGTSAPVFQF-SSHNSWISACKWHNKSWFHLISASYDGKVMLWDLR 303
G +D ++IWD K G Q + H S ++ C NK++ +I++S DG V LWDL+
Sbjct: 597 GNADSTVKIWDI-KTGQCLQTLQGPNKHQSAVT-CLQFNKNF--VITSSDDGTVKLWDLK 652
Query: 304 T 304
T
Sbjct: 653 T 653
Score = 177 (67.4 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 63/247 (25%), Positives = 113/247 (45%)
Query: 108 KIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLW--------RTNDSDAAG---N 156
+++S K+L+GH V + + GN + SGS D T+ +W RT G +
Sbjct: 369 ELKSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSS 427
Query: 157 QVS---IKKRKGNNQVEEPQLE-GEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTW 212
Q+ I + ++ E GE I TL GHT V + ++ + S S D ++R W
Sbjct: 428 QMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVV-SGSRDATLRVW 486
Query: 213 DVEMGKDLSDIFCGK--ALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSS 270
D+E G+ L + G A+ C+ G + +G D ++++WDP T +
Sbjct: 487 DIETGQCLH-VLMGHVAAVRCVQYDGRR---VVSGAYDFMVKVWDPE---TETCLHTLQG 539
Query: 271 HNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSV- 329
H + + + ++ H++S S D + +WD+ T + + H+ L + D++
Sbjct: 540 HTNRVYSLQFDG---IHVVSGSLDTSIRVWDVETGNCIHTLTGHQS--LTSGMELKDNIL 594
Query: 330 ISGGVDS 336
+SG DS
Sbjct: 595 VSGNADS 601
Score = 149 (57.5 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 74/311 (23%), Positives = 133/311 (42%)
Query: 35 PGFILT---GCYDNLGRV---WKAGGVCT-HILEGHCGAVSSVNIIKSDGLKYVTVATAS 87
PGFI + Y R+ W+ G + + +L+GH V + ++ G + V+ S
Sbjct: 344 PGFIHSPWKSAYIRQHRIDTNWRRGELKSPKVLKGHDDHV--ITCLQFCGNRIVS---GS 398
Query: 88 KDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWR 147
D TL++W V K +R+ L GH V S ++ N++ SGS D T+ +W
Sbjct: 399 DDNTLKVWS-----AVTG-KCLRT---LVGHTGGVWS--SQMRDNIIISGSTDRTLKVWN 447
Query: 148 TNDSDAA----GNQVSIK------KR--KGNNQ--VEEPQLE-GEAISTLVGHTQCVSSV 192
+ G+ +++ KR G+ + +E G+ + L+GH V V
Sbjct: 448 AETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCV 507
Query: 193 VWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILR 252
+ + + S ++D V+ WD E L + G + +G +++ G D +R
Sbjct: 508 QYDGRRVV-SGAYDFMVKVWDPETETCLHTLQ-GHTNRVYSLQFDGIHVVS-GSLDTSIR 564
Query: 253 IWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVI- 311
+WD T + + H S S + + L+S + D V +WD++T L +
Sbjct: 565 VWDVE---TGNCIHTLTGHQSLTSGMELKDNI---LVSGNADSTVKIWDIKTGQCLQTLQ 618
Query: 312 --DSHKDKVLC 320
+ H+ V C
Sbjct: 619 GPNKHQSAVTC 629
Score = 141 (54.7 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 42/169 (24%), Positives = 78/169 (46%)
Query: 176 GEAISTLVGHTQCVSSVVWPQQ---ETIYSASWDHSVRTWDVEMGKDLSDIFCGKA-LNC 231
G+ + TLVGHT VW Q I S S D +++ W+ E G+ + ++ + + C
Sbjct: 411 GKCLRTLVGHT----GGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRC 466
Query: 232 IDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291
+ + + + +G D LR+WD T + H + + ++ + ++S
Sbjct: 467 MHLHEKR---VVSGSRDATLRVWDIE---TGQCLHVLMGHVAAVRCVQYDGR---RVVSG 517
Query: 292 SYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGGVDSKLCV 340
+YD V +WD T L + H ++V + G V+SG +D+ + V
Sbjct: 518 AYDFMVKVWDPETETCLHTLQGHTNRVYSLQF-DGIHVVSGSLDTSIRV 565
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 210 (79.0 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 85/301 (28%), Positives = 134/301 (44%)
Query: 23 HDDWVSAVDGSNPGFILTGCYDNLGRVWKA-GGVCTHILEGHCGAVSSVNIIKSDGLKYV 81
HDD V I++G DN +VW A G C L GH G V S + D +
Sbjct: 384 HDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQM--RDNI--- 438
Query: 82 TVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDC 141
+ + S D+TL++W + E ++ L GH ++V + V SGS D
Sbjct: 439 -IISGSTDRTLKVWNAETGECIH---------TLYGHTSTVRCMHLHEK--RVVSGSRDA 486
Query: 142 TISLWRTNDSDAA----GNQVSIK--KRKGNNQVE----------EPQLEGEAISTLVGH 185
T+ +W G+ +++ + G V +P+ E + TL GH
Sbjct: 487 TLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETE-TCLHTLQGH 545
Query: 186 TQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGE-GSALIAA 244
T V S+ + + S S D S+R WDVE G + + ++L G E ++ +
Sbjct: 546 TNRVYSLQFDGIHVV-SGSLDTSIRVWDVETGNCIHTLTGHQSLTS---GMELKDNILVS 601
Query: 245 GGSDPILRIWDPRKPGTSAPVFQF-SSHNSWISACKWHNKSWFHLISASYDGKVMLWDLR 303
G +D ++IWD K G Q + H S ++ C NK++ +I++S DG V LWDL+
Sbjct: 602 GNADSTVKIWDI-KTGQCLQTLQGPNKHQSAVT-CLQFNKNF--VITSSDDGTVKLWDLK 657
Query: 304 T 304
T
Sbjct: 658 T 658
Score = 177 (67.4 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 63/247 (25%), Positives = 113/247 (45%)
Query: 108 KIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLW--------RTNDSDAAG---N 156
+++S K+L+GH V + + GN + SGS D T+ +W RT G +
Sbjct: 374 ELKSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSS 432
Query: 157 QVS---IKKRKGNNQVEEPQLE-GEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTW 212
Q+ I + ++ E GE I TL GHT V + ++ + S S D ++R W
Sbjct: 433 QMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVV-SGSRDATLRVW 491
Query: 213 DVEMGKDLSDIFCGK--ALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSS 270
D+E G+ L + G A+ C+ G + +G D ++++WDP T +
Sbjct: 492 DIETGQCLH-VLMGHVAAVRCVQYDGRR---VVSGAYDFMVKVWDPE---TETCLHTLQG 544
Query: 271 HNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSV- 329
H + + + ++ H++S S D + +WD+ T + + H+ L + D++
Sbjct: 545 HTNRVYSLQFDG---IHVVSGSLDTSIRVWDVETGNCIHTLTGHQS--LTSGMELKDNIL 599
Query: 330 ISGGVDS 336
+SG DS
Sbjct: 600 VSGNADS 606
Score = 149 (57.5 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 74/311 (23%), Positives = 133/311 (42%)
Query: 35 PGFILT---GCYDNLGRV---WKAGGVCT-HILEGHCGAVSSVNIIKSDGLKYVTVATAS 87
PGFI + Y R+ W+ G + + +L+GH V + ++ G + V+ S
Sbjct: 349 PGFIHSPWKSAYIRQHRIDTNWRRGELKSPKVLKGHDDHV--ITCLQFCGNRIVS---GS 403
Query: 88 KDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWR 147
D TL++W V K +R+ L GH V S ++ N++ SGS D T+ +W
Sbjct: 404 DDNTLKVWS-----AVTG-KCLRT---LVGHTGGVWS--SQMRDNIIISGSTDRTLKVWN 452
Query: 148 TNDSDAA----GNQVSIK------KR--KGNNQ--VEEPQLE-GEAISTLVGHTQCVSSV 192
+ G+ +++ KR G+ + +E G+ + L+GH V V
Sbjct: 453 AETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCV 512
Query: 193 VWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILR 252
+ + + S ++D V+ WD E L + G + +G +++ G D +R
Sbjct: 513 QYDGRRVV-SGAYDFMVKVWDPETETCLHTLQ-GHTNRVYSLQFDGIHVVS-GSLDTSIR 569
Query: 253 IWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVI- 311
+WD T + + H S S + + L+S + D V +WD++T L +
Sbjct: 570 VWDVE---TGNCIHTLTGHQSLTSGMELKDNI---LVSGNADSTVKIWDIKTGQCLQTLQ 623
Query: 312 --DSHKDKVLC 320
+ H+ V C
Sbjct: 624 GPNKHQSAVTC 634
Score = 141 (54.7 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 42/169 (24%), Positives = 78/169 (46%)
Query: 176 GEAISTLVGHTQCVSSVVWPQQ---ETIYSASWDHSVRTWDVEMGKDLSDIFCGKA-LNC 231
G+ + TLVGHT VW Q I S S D +++ W+ E G+ + ++ + + C
Sbjct: 416 GKCLRTLVGHT----GGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRC 471
Query: 232 IDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291
+ + + + +G D LR+WD T + H + + ++ + ++S
Sbjct: 472 MHLHEKR---VVSGSRDATLRVWDIE---TGQCLHVLMGHVAAVRCVQYDGR---RVVSG 522
Query: 292 SYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGGVDSKLCV 340
+YD V +WD T L + H ++V + G V+SG +D+ + V
Sbjct: 523 AYDFMVKVWDPETETCLHTLQGHTNRVYSLQF-DGIHVVSGSLDTSIRV 570
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 206 (77.6 bits), Expect = 3.4e-14, P = 3.4e-14
Identities = 73/268 (27%), Positives = 116/268 (43%)
Query: 60 LEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHK 119
LEGH + +V DG +A+ S D T++LW P + L GH
Sbjct: 37 LEGHSDWIETVTF-SPDGR---LLASGSNDTTIKLWD---------PASGGLKQTLEGHS 83
Query: 120 ASVHSIAAETSGNMVCSGSWDCTISLWRT-NDS-----DAAGNQVSIKKRKGNNQVEEPQ 173
+SV S+A +G ++ SGS D TI LW + +DS + ++V N Q+ P
Sbjct: 84 SSVQSVAFSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQLWNPA 143
Query: 174 LEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCI 232
+ G T+ GH+ V SV + P + + S S + +++ WD L G + +
Sbjct: 144 I-GSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWD-SATCGLKHTLGGHSNWVL 201
Query: 233 D-IGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291
+ L+A+G +D +++WDP P S H++ I + + L S
Sbjct: 202 PLVFSPDGRLLASGSNDATIKLWDP--PSGSLK-HTLEGHSNKIESLAFSPNGQL-LASG 257
Query: 292 SYDGKVMLWDLRTAWPLSVIDSHKDKVL 319
S D + LWD T + H D VL
Sbjct: 258 SSDATIKLWDTATGSFRHTLKGHSDMVL 285
Score = 171 (65.3 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 75/293 (25%), Positives = 121/293 (41%)
Query: 23 HDDWVSAVDGSNPGFIL-TGCYDNLGRVWK-AGGVCTHILEGHCGAVSSVNIIKSDGLKY 80
H DW+ V S G +L +G D ++W A G LEGH +V SV + L
Sbjct: 40 HSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSPNGQL-- 97
Query: 81 VTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNM--VCSGS 138
+A+ S D T++LW A + + H + GH V S+A +G + GS
Sbjct: 98 --LASGSSDTTIKLWN-SASDSLKHT--------MEGHSDRVESVAFSPNGQLWNPAIGS 146
Query: 139 WDCTI---SLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAIS-TLVGHTQCVSSVVW 194
TI S W + + + Q+ + ++ + TL GH+ V +V+
Sbjct: 147 LKHTIEGHSDWVLSVAFSPDGQL-LASGSAEKTIKLWDSATCGLKHTLGGHSNWVLPLVF 205
Query: 195 -PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKA--LNCIDIGGEGSALIAAGGSDPIL 251
P + S S D +++ WD G L G + + + G L+A+G SD +
Sbjct: 206 SPDGRLLASGSNDATIKLWDPPSGS-LKHTLEGHSNKIESLAFSPNGQ-LLASGSSDATI 263
Query: 252 RIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRT 304
++WD T + H+ + + + S L S S D + LWD T
Sbjct: 264 KLWDT---ATGSFRHTLKGHSDMVLSVVFSPDSQL-LESGSGDNTIKLWDPAT 312
>ASPGD|ASPL0000014385 [details] [associations]
symbol:cpcB species:162425 "Emericella nidulans"
[GO:0034198 "cellular response to amino acid starvation"
evidence=IMP] [GO:0001965 "G-protein alpha-subunit binding"
evidence=IGI;ISS] [GO:0070798 "positive regulation of
cleistothecium development" evidence=IMP] [GO:0005622
"intracellular" evidence=IDA] [GO:0035690 "cellular response to
drug" evidence=IEP] [GO:0097308 "cellular response to farnesol"
evidence=IEP] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0005080 "protein kinase C binding" evidence=IEA] [GO:0070791
"cleistothecium development" evidence=IMP] [GO:0032995 "regulation
of fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001302
EMBL:AACD01000067 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
RefSeq:XP_661767.1 ProteinModelPortal:G5EB28 SMR:G5EB28
EnsemblFungi:CADANIAT00004509 GeneID:2873584 KEGG:ani:AN4163.2
Uniprot:G5EB28
Length = 316
Score = 138 (53.6 bits), Expect = 3.5e-14, Sum P(2) = 3.5e-14
Identities = 47/134 (35%), Positives = 65/134 (48%)
Query: 23 HDDWVSAVDGS--NPGFILTGCYD------NLGRVWKAGGVCTHILEGHCGAVSSVNIIK 74
H+ WV+++ S NP +L+G D NL R +A G LEGH VS +I
Sbjct: 14 HNGWVTSLATSLENPNMLLSGSRDKTLIIWNLTRDEQAYGYPKRSLEGHSHIVSDC-VIS 72
Query: 75 SDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMV 134
SDG Y +AS D++LRLW+ + + R+F GH V S++ +
Sbjct: 73 SDGA-YAL--SASWDKSLRLWELSSGQTT------RTFV---GHTNDVLSVSFSADNRQI 120
Query: 135 CSGSWDCTISLWRT 148
SGS D TI LW T
Sbjct: 121 VSGSRDRTIKLWNT 134
Score = 125 (49.1 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 35/139 (25%), Positives = 61/139 (43%)
Query: 167 NQVEEPQLEGEAISTLVGHTQCVSS-VVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFC 225
N + Q G +L GH+ VS V+ SASWD S+R W++ G+ + F
Sbjct: 44 NLTRDEQAYGYPKRSLEGHSHIVSDCVISSDGAYALSASWDKSLRLWELSSGQT-TRTFV 102
Query: 226 GKALNCIDIG-GEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWH-NK 283
G + + + + I +G D +++W+ G H W+S ++ N
Sbjct: 103 GHTNDVLSVSFSADNRQIVSGSRDRTIKLWNTL--GDCKYTITDKGHTEWVSCVRFSPNP 160
Query: 284 SWFHLISASYDGKVMLWDL 302
++SA +D V +W+L
Sbjct: 161 QNPVIVSAGWDKLVKVWEL 179
Score = 110 (43.8 bits), Expect = 3.5e-14, Sum P(2) = 3.5e-14
Identities = 28/77 (36%), Positives = 41/77 (53%)
Query: 184 GHTQCVSSVVW---PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKA--LNCIDIGGEG 238
GHT+ VS V + PQ I SA WD V+ W++ + +D G +N + I +G
Sbjct: 146 GHTEWVSCVRFSPNPQNPVIVSAGWDKLVKVWELASCRLQTD-HIGHTGYINTVTISPDG 204
Query: 239 SALIAAGGSDPILRIWD 255
S L A+GG D + +WD
Sbjct: 205 S-LCASGGKDGVTMLWD 220
Score = 70 (29.7 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 18/43 (41%), Positives = 22/43 (51%)
Query: 115 LRGHKASVHSIAAETSG-NMVCSGSWDCTISLWR-TNDSDAAG 155
L GH V S+A NM+ SGS D T+ +W T D A G
Sbjct: 11 LEGHNGWVTSLATSLENPNMLLSGSRDKTLIIWNLTRDEQAYG 53
Score = 56 (24.8 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 19/77 (24%), Positives = 31/77 (40%)
Query: 183 VGHTQCVSSV-VWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSAL 241
+GHT +++V + P S D WD+ K L + G ++ + L
Sbjct: 189 IGHTGYINTVTISPDGSLCASGGKDGVTMLWDLNESKHLYSLHAGDEIHALVFSPNRYWL 248
Query: 242 IAAGGSDPILRIWDPRK 258
AA S + I+D K
Sbjct: 249 CAATSSS--ITIFDLEK 263
Score = 50 (22.7 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 14/63 (22%), Positives = 30/63 (47%)
Query: 153 AAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQ-ETIYSASWDHSVRT 211
A + ++I + ++V+E + E +CVS + W +T+++ D+ +R
Sbjct: 251 ATSSSITIFDLEKKSKVDELKPEYIEKGKKSREPECVS-LAWSADGQTLFAGYTDNKIRA 309
Query: 212 WDV 214
W V
Sbjct: 310 WGV 312
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 211 (79.3 bits), Expect = 6.3e-14, P = 6.3e-14
Identities = 84/324 (25%), Positives = 143/324 (44%)
Query: 38 ILTGCYDNLGRVWK-AGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWK 96
+++G YD+ ++W A G L+GH G V S+ DG +A+ S D T+ LW
Sbjct: 765 LVSGSYDDTVKIWDPATGELLQTLDGHSGTVESL-AFSPDGK---LLASGSYDNTIDLWD 820
Query: 97 FDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLW--------RT 148
EL +++F+ GH S+ S+A G + S S D TI +W +T
Sbjct: 821 SATGEL------LQTFE---GHPHSIWSVAFAPDGKELASASDDSTIKIWDLATGELQQT 871
Query: 149 NDSDAA----------GNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQ 197
DS + G ++ +V P GE +L G + V SV + P
Sbjct: 872 LDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPAT-GELQQSLEGRSGWVKSVAFSPDG 930
Query: 198 ETIYSASWDHSVRTWDVEMGKDLSDIFC-GKALNCIDIGGEGSALIAAGGSDPILRIWDP 256
+ + S S ++V+ W+ G+ L + +++ + +G L A+ SD +++W+
Sbjct: 931 KKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQL-ASSSSDTTIKLWN- 988
Query: 257 RKPGTSAPVFQ-FSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHK 315
T+ + Q F H+ WI A + + HL+S S D + LWDL T+ ++ H
Sbjct: 989 ---STTGELQQTFKGHDLWIRAVAF-SPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHS 1044
Query: 316 DKVLCADWWRGDSVI-SGGVDSKL 338
V + D + S +DS +
Sbjct: 1045 RSVHAVAFSPDDKQLASSSLDSTI 1068
Score = 208 (78.3 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 85/311 (27%), Positives = 137/311 (44%)
Query: 26 WVSAVDGSNPGFIL-TGCYDNLGRVWK-AGGVCTHILEGHCGAVSSVNIIKSDGLKYVTV 83
WV +V S G L +G N ++W A G LEGH +V SV DG + +
Sbjct: 920 WVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSV-AFSPDGKQ---L 975
Query: 84 ATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTI 143
A++S D T++LW EL ++FK GH + ++A G + SGS D TI
Sbjct: 976 ASSSSDTTIKLWNSTTGELQ------QTFK---GHDLWIRAVAFSPDGKHLVSGSDDNTI 1026
Query: 144 SLW--RTND-----SDAAGNQVSIKKRKGNNQVEEPQLE----------GEAISTLVGHT 186
LW T++ D + + ++ + Q+ L+ GE TL GH+
Sbjct: 1027 KLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHS 1086
Query: 187 QCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKA--LNCIDIGGEGSALIA 243
Q V SV + P + + S S+D +++ W+ G +L G++ ++ + +G L A
Sbjct: 1087 QGVRSVTFSPDGKLLASNSYDGTIKLWNPLTG-ELQQTLTGRSDWVDSVAFSPDGKQL-A 1144
Query: 244 AGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLR 303
+G D +++WD T + H+ I + + L S SYD LWD
Sbjct: 1145 SGYYDSTIKLWDS---ATGELLQTLEGHSDRIQSVVFSPDGKL-LASGSYDQTAKLWDPA 1200
Query: 304 TAWPLSVIDSH 314
T L + + H
Sbjct: 1201 TGELLQIFEGH 1211
Score = 205 (77.2 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 80/318 (25%), Positives = 137/318 (43%)
Query: 23 HDDWVSAVDGSNPGFIL-TGCYDNLGRVWK-AGGVCTHILEGHCGAVSSVNIIKSDGLKY 80
H V +V S G +L + D+ +VW A G LEG G V SV DG K
Sbjct: 875 HSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSV-AFSPDGKK- 932
Query: 81 VTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWD 140
+A+ S+ T++LW EL+ + L GH SV S+A G + S S D
Sbjct: 933 --LASGSEKNTVKLWNPATGELL---------QTLEGHSQSVRSVAFSPDGKQLASSSSD 981
Query: 141 CTISLWRTNDSDAA----GNQVSIK----KRKGNNQV---EEPQLE------GEAISTLV 183
TI LW + + G+ + I+ G + V ++ ++ E +L
Sbjct: 982 TTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLE 1041
Query: 184 GHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCG--KALNCIDIGGEGSA 240
H++ V +V + P + + S+S D +++ WD G +L G + + + +G
Sbjct: 1042 DHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATG-ELQRTLEGHSQGVRSVTFSPDGK- 1099
Query: 241 LIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLW 300
L+A+ D +++W+P T + + W+ + + + L S YD + LW
Sbjct: 1100 LLASNSYDGTIKLWNPL---TGELQQTLTGRSDWVDSVAF-SPDGKQLASGYYDSTIKLW 1155
Query: 301 DLRTAWPLSVIDSHKDKV 318
D T L ++ H D++
Sbjct: 1156 DSATGELLQTLEGHSDRI 1173
Score = 179 (68.1 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 76/300 (25%), Positives = 122/300 (40%)
Query: 23 HDDWVSAVDGSNPGFIL-TGCYDNLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKY 80
H V +V S G L + D ++W + G +GH + +V DG K+
Sbjct: 959 HSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAV-AFSPDG-KH 1016
Query: 81 VTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWD 140
+ + S D T++LW EL L H SVH++A + S S D
Sbjct: 1017 LV--SGSDDNTIKLWDLATSELQQS---------LEDHSRSVHAVAFSPDDKQLASSSLD 1065
Query: 141 CTISLW--------RTNDSDAAG-NQVSIK---KRKGNNQVEEP-----QLEGEAISTLV 183
TI LW RT + + G V+ K +N + L GE TL
Sbjct: 1066 STIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLT 1125
Query: 184 GHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFC-GKALNCIDIGGEGSAL 241
G + V SV + P + + S +D +++ WD G+ L + + + +G L
Sbjct: 1126 GRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGK-L 1184
Query: 242 IAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWD 301
+A+G D ++WDP G +F+ H+ W+ + + L S+SY + LWD
Sbjct: 1185 LASGSYDQTAKLWDPAT-GELLQIFE--GHSKWVESVAFSPDGKL-LASSSYGETIKLWD 1240
Score = 145 (56.1 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 56/185 (30%), Positives = 83/185 (44%)
Query: 25 DWVSAVDGSNPGFIL-TGCYDNLGRVW-KAGGVCTHILEGHCGAVSSVNIIKSDGLKYVT 82
DWV +V S G L +G YD+ ++W A G LEGH + SV + DG
Sbjct: 1129 DWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSV-VFSPDGK---L 1184
Query: 83 VATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCT 142
+A+ S DQT +LW EL+ +I GH V S+A G ++ S S+ T
Sbjct: 1185 LASGSYDQTAKLWDPATGELL---------QIFEGHSKWVESVAFSPDGKLLASSSYGET 1235
Query: 143 ISLW--------RT-NDSDAAGNQVSIK---KRKGNNQVEEPQL----EGEAISTLVGHT 186
I LW +T ND D + V+ R + + + ++ GE + L GH+
Sbjct: 1236 IKLWDPVTGELLQTLNDPDESAGSVAFSPDGNRLASVDIFDTKIWDPATGELLQALKGHS 1295
Query: 187 QCVSS 191
+ V S
Sbjct: 1296 KWVWS 1300
Score = 142 (55.0 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 49/164 (29%), Positives = 72/164 (43%)
Query: 181 TLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLS--DIFCGKALNCIDIGGE 237
TL H V SVV+ P + + S S+D +V+ WD G+ L D G + + +
Sbjct: 745 TLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSG-TVESLAFSPD 803
Query: 238 GSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKV 297
G L+A+G D + +WD G F+ H+ W A K L SAS D +
Sbjct: 804 GK-LLASGSYDNTIDLWDSAT-GELLQTFEGHPHSIWSVAFAPDGKE---LASASDDSTI 858
Query: 298 MLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKLCV 340
+WDL T +DSH V + G + S +DS + V
Sbjct: 859 KIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKV 902
Score = 129 (50.5 bits), Expect = 6.4e-09, Sum P(2) = 6.4e-09
Identities = 46/146 (31%), Positives = 67/146 (45%)
Query: 23 HDDWVSAVDGSNPGFIL-TGCYDNLGRVW-KAGGVCTHILEGHCGAVSSVNIIKSDGLKY 80
H V ++ S G +L +G YDN +W A G EGH ++ SV DG +
Sbjct: 791 HSGTVESLAFSPDGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSV-AFAPDGKE- 848
Query: 81 VTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWD 140
+A+AS D T+++W EL + L H SV S+A G ++ S S D
Sbjct: 849 --LASASDDSTIKIWDLATGELQ---------QTLDSHSQSVRSVAFSPDGKLLASSSLD 897
Query: 141 CTISLWRTNDSDAAGN-QVSIKKRKG 165
TI +W + A G Q S++ R G
Sbjct: 898 STIKVW----NPATGELQQSLEGRSG 919
Score = 115 (45.5 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 35/108 (32%), Positives = 52/108 (48%)
Query: 39 LTGCYDNLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFD 98
L+G + L +V + LE H G V SV + DG + V+ S D T+++W
Sbjct: 726 LSG-WSQLPKVEQTWSAEQQTLENHLGPVESV-VFSPDGKQLVS---GSYDDTVKIWDPA 780
Query: 99 AEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLW 146
EL+ + L GH +V S+A G ++ SGS+D TI LW
Sbjct: 781 TGELL---------QTLDGHSGTVESLAFSPDGKLLASGSYDNTIDLW 819
Score = 87 (35.7 bits), Expect = 6.4e-09, Sum P(2) = 6.4e-09
Identities = 24/102 (23%), Positives = 47/102 (46%)
Query: 176 GEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFC-GKALNCID 233
GE + GH++ V SV + P + + S+S+ +++ WD G+ L + ++ +
Sbjct: 1202 GELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKLWDPVTGELLQTLNDPDESAGSVA 1261
Query: 234 IGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWI 275
+G+ L + D +IWDP T + H+ W+
Sbjct: 1262 FSPDGNRLASVDIFDT--KIWDP---ATGELLQALKGHSKWV 1298
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 135 (52.6 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 42/149 (28%), Positives = 71/149 (47%)
Query: 195 PQQETIYSASWDHSVRTWDVEMGKDLSDIFC--GKALNCIDIGGEGSALIAAGGSDPILR 252
P I SAS D +V+ WD + ++ +C G + +D G+ IAA G D ++
Sbjct: 155 PDGRLIVSASDDKTVKLWD-KTSRECIHSYCEHGGFVTYVDFHPSGTC-IAAAGMDNTVK 212
Query: 253 IWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVID 312
+WD R T + + H++ ++A +H S +LI+AS D + + DL L +
Sbjct: 213 VWDAR---THRLLQHYQLHSAAVNALSFH-PSGNYLITASSDSTLKILDLMEGRLLYTLH 268
Query: 313 SHKDKVLCADWWR-GDSVISGGVDSKLCV 340
H+ + R G+ SGG D ++ V
Sbjct: 269 GHQGPATTVAFSRTGEYFASGGSDEQVMV 297
Score = 113 (44.8 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 41/146 (28%), Positives = 66/146 (45%)
Query: 12 VAPQKEEEPSL------HDDWVSAVDGS-NPGFILTGCYDNLGRVWKAGGVC-THILEGH 63
+A +E+PSL H D V+ VD S N + +G D+ +W + GH
Sbjct: 1 MAAPSQEDPSLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGH 60
Query: 64 CGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVH 123
AV+ VN S L +A+ S+D+T+R+W P + R H A+V
Sbjct: 61 KDAVTCVNFSPSGHL----LASGSRDKTVRIWV---------PNVKGESTVFRAHTATVR 107
Query: 124 SIAAETSGNMVCSGSWDCTISLWRTN 149
S+ + G + + S D T+ +W T+
Sbjct: 108 SVHFCSDGQSLVTASDDKTVKVWSTH 133
Score = 100 (40.3 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 38/127 (29%), Positives = 56/127 (44%)
Query: 23 HDDWVSAVDGSNPGFIL-TGCYDNLGRVW--KAGGVCTHILEGHCGAVSSVNIIKSDGLK 79
H D V+ V+ S G +L +G D R+W G T + H V SV+ SDG
Sbjct: 60 HKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGEST-VFRAHTATVRSVHFC-SDGQS 117
Query: 80 YVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSW 139
VT AS D+T+++W H ++ F + + H V G ++ S S
Sbjct: 118 LVT---ASDDKTVKVWS-------THRQRFL-FSLTQ-HINWVRCAKFSPDGRLIVSASD 165
Query: 140 DCTISLW 146
D T+ LW
Sbjct: 166 DKTVKLW 172
Score = 54 (24.1 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 14/49 (28%), Positives = 21/49 (42%)
Query: 106 PKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAA 154
P R FK GH+ +V + + + SGS D T+ +W A
Sbjct: 9 PSLERHFK---GHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRA 54
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 202 (76.2 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 87/341 (25%), Positives = 149/341 (43%)
Query: 23 HDDWVSAVDGS-NPGFILTGCYDNLGRVW--KAGGVCTHILEGHCGAVSSVNI----IKS 75
H WV AV S N I TG DN R+W K G L+GH ++S+ ++
Sbjct: 190 HTSWVLAVSYSPNGAMIATGSMDNTVRIWDAKKGQALGAPLKGHVKWITSLAWEPYHLQQ 249
Query: 76 DGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVC 135
G + +A+ASKD T+R+W ++++ I +L GHK SV + +G +
Sbjct: 250 SG--HPRLASASKDSTVRIW-----DVISKRADI----VLSGHKGSVTCVRWGGTGKIYT 298
Query: 136 SGSWDCTISLWRTNDS------DAAGNQVS---------IKKRKGNNQVEEPQLEGEAIS 180
S S D TI +W + A ++V+ ++ ++ + P+ + + ++
Sbjct: 299 S-SHDRTIKVWNSQTGTLIQTLSAHAHRVNHLALSTDFILRTAYHDHTGKVPESDADKVA 357
Query: 181 TLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCG--KALNCIDIGGEG 238
+ +++ E + SAS D ++ WD E G K +N + +
Sbjct: 358 MAKKRFEKAATINNKIVEKLVSASDDFTMYLWDPESSSKPVARLLGHQKEVNHVTFSPD- 416
Query: 239 SALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVM 298
A IA+ G D +++W+ R G + H + C + S L+S+S D +
Sbjct: 417 MAYIASAGFDNHVKLWNGRD-GKFITTLR--GHVGAVYQCCFSADSRL-LVSSSKDTTLK 472
Query: 299 LWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKL 338
+W++RT + HKD+V DW G V SGG D +
Sbjct: 473 VWNVRTGKLSEDLPGHKDEVFAVDWSPDGQKVGSGGKDKAI 513
Score = 159 (61.0 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 50/180 (27%), Positives = 78/180 (43%)
Query: 180 STLVGHTQCVSSVVW-P-QQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIG-G 236
+++ GH + + + + P T+ S S D + R WD + G L + G + +
Sbjct: 142 ASIAGHGEAILATSFSPVSSSTMVSGSGDSTARIWDCDTGTPLHTLK-GHTSWVLAVSYS 200
Query: 237 EGSALIAAGGSDPILRIWDPRK-PGTSAPVFQFSSHNSWISACKW---HNKSWFH--LIS 290
A+IA G D +RIWD +K AP+ H WI++ W H + H L S
Sbjct: 201 PNGAMIATGSMDNTVRIWDAKKGQALGAPL---KGHVKWITSLAWEPYHLQQSGHPRLAS 257
Query: 291 ASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGGVDSKLCV---SSGVSIQ 347
AS D V +WD+ + V+ HK V C W + + D + V +G IQ
Sbjct: 258 ASKDSTVRIWDVISKRADIVLSGHKGSVTCVRWGGTGKIYTSSHDRTIKVWNSQTGTLIQ 317
Score = 122 (48.0 bits), Expect = 0.00017, P = 0.00017
Identities = 37/151 (24%), Positives = 65/151 (43%)
Query: 176 GEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDI 234
G + TL GHT V +V + P I + S D++VR WD + G+ L G +
Sbjct: 181 GTPLHTLKGHTSWVLAVSYSPNGAMIATGSMDNTVRIWDAKKGQALGAPLKGHVKWITSL 240
Query: 235 GGE-------GSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFH 287
E G +A+ D +RIWD A + S H ++ +W
Sbjct: 241 AWEPYHLQQSGHPRLASASKDSTVRIWDVISK--RADIV-LSGHKGSVTCVRWGGTG--K 295
Query: 288 LISASYDGKVMLWDLRTAWPLSVIDSHKDKV 318
+ ++S+D + +W+ +T + + +H +V
Sbjct: 296 IYTSSHDRTIKVWNSQTGTLIQTLSAHAHRV 326
Score = 91 (37.1 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 24/82 (29%), Positives = 41/82 (50%)
Query: 175 EGEAISTLVGHTQCVSSVVWP-QQETIYSASWDHSVRTWDVEMGKDLSDIFCGK-ALNCI 232
+G+ I+TL GH V + + S+S D +++ W+V GK D+ K + +
Sbjct: 436 DGKFITTLRGHVGAVYQCCFSADSRLLVSSSKDTTLKVWNVRTGKLSEDLPGHKDEVFAV 495
Query: 233 DIGGEGSALIAAGGSDPILRIW 254
D +G + +GG D +RIW
Sbjct: 496 DWSPDGQK-VGSGGKDKAIRIW 516
Score = 91 (37.1 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 27/105 (25%), Positives = 46/105 (43%)
Query: 51 KAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIR 110
KA C+ + GH A+ + + + T+ + S D T R+W D P
Sbjct: 135 KAVSRCSASIAGHGEAILATSF---SPVSSSTMVSGSGDSTARIWDCDT----GTP---- 183
Query: 111 SFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAG 155
L+GH + V +++ +G M+ +GS D T+ +W A G
Sbjct: 184 -LHTLKGHTSWVLAVSYSPNGAMIATGSMDNTVRIWDAKKGQALG 227
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 172 (65.6 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 68/304 (22%), Positives = 126/304 (41%)
Query: 55 VCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLW-KFDAEELVNHPKKIRSFK 113
+ + L+GH ++SSV DG K++ A+AS D+T+++W +D K +
Sbjct: 37 ILKYTLKGHLKSISSVKF-SPDG-KWL--ASASADKTIKIWGAYDG--------KFE--R 82
Query: 114 ILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAA----GNQ---VSIKKRKGN 166
L GHK + IA ++CS S D TI +W G++ + +
Sbjct: 83 TLEGHKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQS 142
Query: 167 NQVEEPQLE----------GEAISTLVGHTQCVSSVVWPQQET-IYSASWDHSVRTWDVE 215
N + + GE + H+ V+ V + + T + S S+D +VR WD
Sbjct: 143 NLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTT 202
Query: 216 MGKDLSDIFC--GKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNS 273
G+ L+ I GK ++ + G + AG D LR+W + +
Sbjct: 203 TGQLLNTISTEDGKEVSFVKFSPNGK-FVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEK 261
Query: 274 WISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGG 333
+ + +++ S D + +++L+T + + H+D VL +++I+ G
Sbjct: 262 YCIFSTFSVTCGKWIVTGSEDNLIYIYNLQTREIVQTLAGHEDVVLTVACHPTENIIASG 321
Query: 334 VDSK 337
K
Sbjct: 322 ALEK 325
Score = 169 (64.5 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 50/168 (29%), Positives = 83/168 (49%)
Query: 175 EGEAISTLVGHTQCVSSVVWPQQ-ETIYSASWDHSVRTWDVEMGKDLSDIFCGKA-LNCI 232
+G+ TL GH + +S + W Q + I SAS D +++ WDVE GK + + K + +
Sbjct: 77 DGKFERTLEGHKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGV 136
Query: 233 DIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISAS 292
+ S LI +G D +RIWD T S+H+ ++ + N+ ++S S
Sbjct: 137 SFNPQ-SNLIVSGSFDENVRIWDVN---TGECTKMISAHSDPVTGVHF-NRDGTLVVSGS 191
Query: 293 YDGKVMLWDLRTAWPLSVIDSHKDKVLCADWW--RGDSVISGGVDSKL 338
YDG V +WD T L+ I + K + + G V++G +D+ L
Sbjct: 192 YDGTVRIWDTTTGQLLNTISTEDGKEVSFVKFSPNGKFVLAGTLDNTL 239
Score = 152 (58.6 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 49/173 (28%), Positives = 77/173 (44%)
Query: 168 QVEE-PQLEGEAIS-TLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIF 224
Q E PQ + TL GH + +SSV + P + + SAS D +++ W GK
Sbjct: 26 QTESIPQTPNYILKYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGK-FERTL 84
Query: 225 CGKALNCIDIG-GEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNK 283
G DI + S LI + D ++IWD + V H ++ ++ +
Sbjct: 85 EGHKEGISDIAWSQDSKLICSASDDKTIKIWDVE---SGKMVKTLKGHKEYVFGVSFNPQ 141
Query: 284 SWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGVD 335
S ++S S+D V +WD+ T +I +H D V + R G V+SG D
Sbjct: 142 SNL-IVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYD 193
Score = 122 (48.0 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 33/128 (25%), Positives = 62/128 (48%)
Query: 27 VSAVDGSNPG-FILTGCYDNLGRVWKA-GGVCTHILEGHCGAVSSVNIIKSDGLKYVTVA 84
+S+V S G ++ + D ++W A G LEGH +S + + L +
Sbjct: 49 ISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQDSKL----IC 104
Query: 85 TASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTIS 144
+AS D+T+++W ++ ++V K L+GHK V ++ N++ SGS+D +
Sbjct: 105 SASDDKTIKIWDVESGKMV---------KTLKGHKEYVFGVSFNPQSNLIVSGSFDENVR 155
Query: 145 LWRTNDSD 152
+W N +
Sbjct: 156 IWDVNTGE 163
Score = 114 (45.2 bits), Expect = 0.00064, P = 0.00064
Identities = 36/132 (27%), Positives = 61/132 (46%)
Query: 23 HDDWVSAVDGSNP--GFILTGCYDNLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLK 79
H ++V V NP I++G +D R+W G CT ++ H V+ V+ + DG
Sbjct: 129 HKEYVFGVS-FNPQSNLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNR-DG-- 184
Query: 80 YVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSW 139
V + S D T+R+W +L+N + G + S + +G V +G+
Sbjct: 185 -TLVVSGSYDGTVRIWDTTTGQLLN------TISTEDGKEVSF--VKFSPNGKFVLAGTL 235
Query: 140 DCTISLWRTNDS 151
D T+ LW N++
Sbjct: 236 DNTLRLWSYNNN 247
Score = 67 (28.6 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 16/51 (31%), Positives = 23/51 (45%)
Query: 100 EELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTND 150
E + P I + L+GH S+ S+ G + S S D TI +W D
Sbjct: 28 ESIPQTPNYILKYT-LKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYD 77
>FB|FBgn0041171 [details] [associations]
symbol:ago "archipelago" species:7227 "Drosophila
melanogaster" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0030332 "cyclin binding"
evidence=TAS] [GO:0007096 "regulation of exit from mitosis"
evidence=TAS] [GO:0045926 "negative regulation of growth"
evidence=IMP] [GO:0042023 "DNA endoreduplication" evidence=IMP]
[GO:0035147 "branch fusion, open tracheal system" evidence=IMP]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] [GO:0007411 "axon guidance" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0007411 GO:GO:0007088
EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0045926
GO:GO:0019005 GO:GO:0008054 GO:GO:0007096 GO:GO:0035147
GO:GO:0042023 GO:GO:0030332 GeneTree:ENSGT00690000101849
EMBL:AY061300 EMBL:AY075401 RefSeq:NP_523922.1 RefSeq:NP_728964.1
RefSeq:NP_728965.1 UniGene:Dm.2559 ProteinModelPortal:Q9VZF4
SMR:Q9VZF4 DIP:DIP-32477N IntAct:Q9VZF4 MINT:MINT-901835
STRING:Q9VZF4 PaxDb:Q9VZF4 PRIDE:Q9VZF4 EnsemblMetazoa:FBtr0073245
EnsemblMetazoa:FBtr0073246 EnsemblMetazoa:FBtr0073247 GeneID:38516
KEGG:dme:Dmel_CG15010 UCSC:CG15010-RA CTD:38516 FlyBase:FBgn0041171
InParanoid:Q9VZF4 KO:K10260 OMA:DLEEICT OrthoDB:EOG45TB38
PhylomeDB:Q9VZF4 GenomeRNAi:38516 NextBio:809050 Bgee:Q9VZF4
GermOnline:CG15010 GO:GO:0060253 Uniprot:Q9VZF4
Length = 1326
Score = 206 (77.6 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 78/300 (26%), Positives = 136/300 (45%)
Query: 23 HDDWVSAVDGSNPGFILTGCYDNLGRVWKA-GGVCTHILEGHCGAVSSVNIIKSDGLKYV 81
HDD V + I++G DN +VW A G C L GH G V S + S +
Sbjct: 993 HDDHVITCLQFSGNRIVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVWSSQM--SGNI--- 1047
Query: 82 TVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDC 141
+ + S D+TL++W D+ V+ L+GH ++V + G+ V SGS D
Sbjct: 1048 -IISGSTDRTLKVWDMDSGACVH---------TLQGHTSTVRCM--HLHGSKVVSGSRDA 1095
Query: 142 TISLWRTNDSDA----AGNQVSIK--KRKGNNQVE----------EPQLEGEAISTLVGH 185
T+ +W G+ +++ + G V P+ + E + TL GH
Sbjct: 1096 TLRVWDIEQGSCLHVLVGHLAAVRCVQYDGKLIVSGAYDYMVKIWHPERQ-ECLHTLQGH 1154
Query: 186 TQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGE-GSALIAA 244
T V S+ + + S S D S+R WDVE G + ++L G E ++ +
Sbjct: 1155 TNRVYSLQFDGLHVV-SGSLDTSIRVWDVETGNCKHTLMGHQSLTS---GMELRQNILVS 1210
Query: 245 GGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRT 304
G +D +++WD + + H+S ++ +++++ ++++S DG V LWD++T
Sbjct: 1211 GNADSTVKVWDITTGQCLQTLSGPNKHHSAVTCLQFNSR---FVVTSSDDGTVKLWDVKT 1267
Score = 146 (56.5 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 75/301 (24%), Positives = 123/301 (40%)
Query: 50 WKAGGVCTHILEGHCGA--VSSVNIIKSDGLKYVT--------VATASKDQTLRLWKFDA 99
WKA + HI+E + + V ++K +T + + S D TL++W
Sbjct: 965 WKAAYMRQHIIEMNWRSRPVRKPKVLKGHDDHVITCLQFSGNRIVSGSDDNTLKVWS--- 1021
Query: 100 EELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAA----- 154
VN K +R+ L GH V S ++ SGN++ SGS D T+ +W DS A
Sbjct: 1022 --AVNG-KCLRT---LVGHTGGVWS--SQMSGNIIISGSTDRTLKVWDM-DSGACVHTLQ 1072
Query: 155 ------------GNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQETIYS 202
G++V R +V + + +G + LVGH V V + + I S
Sbjct: 1073 GHTSTVRCMHLHGSKVVSGSRDATLRVWDIE-QGSCLHVLVGHLAAVRCVQY-DGKLIVS 1130
Query: 203 ASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTS 262
++D+ V+ W E + L + G + +G +++ G D +R+WD T
Sbjct: 1131 GAYDYMVKIWHPERQECLHTLQ-GHTNRVYSLQFDGLHVVS-GSLDTSIRVWDVE---TG 1185
Query: 263 APVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVI---DSHKDKVL 319
H S S + L+S + D V +WD+ T L + + H V
Sbjct: 1186 NCKHTLMGHQSLTSGMELRQNI---LVSGNADSTVKVWDITTGQCLQTLSGPNKHHSAVT 1242
Query: 320 C 320
C
Sbjct: 1243 C 1243
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 207 (77.9 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 86/320 (26%), Positives = 138/320 (43%)
Query: 23 HDDWVSAVDGSNPGFILTGCY-DNLGRVWK-AGGVCTHILEGHCGAVSSVNIIKSDGLKY 80
HD V +V S+ +L D ++W A + LEGH V SV + D
Sbjct: 262 HDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSV-VFSHDSR-- 318
Query: 81 VTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWD 140
+A+AS D T+++W L ++L+GH SV S+ ++ SGS D
Sbjct: 319 -LLASASDDGTVKIWDTATGTLQ---------RMLKGHNDSVRSVVFSHDSRLIASGSND 368
Query: 141 CTISLWRTN---------DSDAAGNQVSIK--KRK-------GNNQVEEPQLEGEAISTL 182
T+ +W T D + + VS R+ GN ++ + + G + L
Sbjct: 369 RTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRT-GSLQNVL 427
Query: 183 VGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKA--LNCIDIGGEGS 239
GH CV+SV + P + SAS D +V+ W G L G + + + S
Sbjct: 428 EGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGS-LQRTLEGHNDWVRSV-VFSHDS 485
Query: 240 ALIAAGGSDPILRIWDPRKPGTSAPVFQ-FSSHNSWISACKWHNKSWFHLISASYDGKVM 298
LIA+ D ++IWD + P+ SH++W+ + + + S L SAS D V
Sbjct: 486 RLIASASDDMTVKIWDT----ATVPLQNNLESHDNWVRSVVFSHDSRL-LASASDDMTVK 540
Query: 299 LWDLRTAWPLSVIDSHKDKV 318
+WD T + ++ H D+V
Sbjct: 541 IWDTATGSLENTLEGHDDRV 560
Score = 142 (55.0 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 77/302 (25%), Positives = 126/302 (41%)
Query: 23 HDDWVSAVDGSNPG-FILTGCYDNLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKY 80
H+D V +V S+ I +G D R+W+ G+ H E H +V +V+ D +
Sbjct: 346 HNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAH-DSRR- 403
Query: 81 VTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWD 140
+A+AS +++W L N +L GH V+S++ ++ S S D
Sbjct: 404 --LASASDGGNVKIWDTRTGSLQN---------VLEGHDDCVNSVSFSPDSRLLASASDD 452
Query: 141 CTISLW--------RTND--SDAAGNQV-SIKKR---KGNNQVEEPQLEGEAI---STLV 183
T+ +W RT + +D + V S R ++ + + + + L
Sbjct: 453 RTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVPLQNNLE 512
Query: 184 GHTQCVSSVVWPQQETIY-SASWDHSVRTWDVEMGKDLSDIFCGK--ALNCIDIGGEGSA 240
H V SVV+ + SAS D +V+ WD G L + G +N + + S
Sbjct: 513 SHDNWVRSVVFSHDSRLLASASDDMTVKIWDTATGS-LENTLEGHDDRVNSVSFSPD-SR 570
Query: 241 LIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLW 300
L+A+ D ++IW GT F S + IS H + L SA DG V +W
Sbjct: 571 LLASASDDGTVKIWYAAT-GTVQHTFDGSGRVA-ISLAFSHTSNL--LASAMDDGTVKIW 626
Query: 301 DL 302
D+
Sbjct: 627 DM 628
>SGD|S000001885 [details] [associations]
symbol:CDC4 "F-box protein required for G1/S and G2/M
transition" species:4932 "Saccharomyces cerevisiae" [GO:0000086
"G2/M transition of mitotic cell cycle" evidence=IGI;IMP]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0043224 "nuclear SCF
ubiquitin ligase complex" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA;IPI]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IMP]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IDA] [GO:0007126 "meiosis" evidence=IMP] [GO:0051301 "cell
division" evidence=IEA] [GO:0030435 "sporulation resulting in
formation of a cellular spore" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 SGD:S000001885 GO:GO:0007126 GO:GO:0000086
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0000082 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:D50617 EMBL:BK006940
SUPFAM:SSF81383 GO:GO:0030435 GO:GO:0016363 GO:GO:0042787
GO:GO:0043130 EMBL:Z46255 GeneTree:ENSGT00550000075528
GO:GO:0031146 EMBL:X05625 PIR:S56245 RefSeq:NP_116585.1 PDB:1NEX
PDB:2P63 PDB:3MKS PDB:3V7D PDBsum:1NEX PDBsum:2P63 PDBsum:3MKS
PDBsum:3V7D ProteinModelPortal:P07834 SMR:P07834 DIP:DIP-1625N
IntAct:P07834 MINT:MINT-389524 STRING:P07834 PaxDb:P07834
PRIDE:P07834 EnsemblFungi:YFL009W GeneID:850539 KEGG:sce:YFL009W
CYGD:YFL009w HOGENOM:HOG000111495 KO:K03361 OMA:VVTCLQH
OrthoDB:EOG4B2X5M EvolutionaryTrace:P07834 NextBio:966298
Genevestigator:P07834 GermOnline:YFL009W GO:GO:0043224
Uniprot:P07834
Length = 779
Score = 202 (76.2 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 65/209 (31%), Positives = 103/209 (49%)
Query: 23 HDDWVSAVDGSNPGFILTGCYDNLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKYV 81
HD V A+ ++ G +++G D RVW G CTH+ +GH V ++I++ +KY+
Sbjct: 421 HDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFKGHNSTVRCLDIVEYKNIKYI 480
Query: 82 TVATASKDQTLRLWKFDAEE------------LVNH-PKKIRSFK-ILRGHKASVHSIAA 127
T S+D TL +WK E LV H P++ F +LRGH ASV +++
Sbjct: 481 V--TGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSG 538
Query: 128 ETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQ 187
GN+V SGS+D T+ +W D A Q++ + L GHT
Sbjct: 539 H--GNIVVSGSYDNTLIVW-----DVA------------------QMK--CLYILSGHTD 571
Query: 188 CVSSVVWP-QQETIYSASWDHSVRTWDVE 215
+ S ++ +++ SAS D ++R WD+E
Sbjct: 572 RIYSTIYDHERKRCISASMDTTIRIWDLE 600
>POMBASE|SPAC4D7.03 [details] [associations]
symbol:pop2 "F-box/WD repeat protein Pop2" species:4896
"Schizosaccharomyces pombe" [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IC]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=IPI] [GO:0032876
"negative regulation of DNA endoreduplication" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPAC4D7.03 GO:GO:0007346 GO:GO:0005737 GO:GO:0005635
EMBL:CU329670 GenomeReviews:CU329670_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0006511
GO:GO:0019005 GO:GO:0032876 KO:K03361 OrthoDB:EOG4B2X5M
EMBL:AF038867 EMBL:AF064515 PIR:T43557 RefSeq:NP_594956.1
ProteinModelPortal:O14170 IntAct:O14170 STRING:O14170
EnsemblFungi:SPAC4D7.03.1 GeneID:2543514 KEGG:spo:SPAC4D7.03
OMA:RIANMEC NextBio:20804524 Uniprot:O14170
Length = 703
Score = 199 (75.1 bits), Expect = 6.0e-13, P = 6.0e-13
Identities = 73/268 (27%), Positives = 120/268 (44%)
Query: 54 GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVN----HPKKI 109
GV LEGH V +V I ++ T+ + S D+T+R+W + + + H I
Sbjct: 381 GVLEARLEGHKEGVWAVKIHEN------TLVSGSIDKTVRVWNIEKAKCTHIFRGHISII 434
Query: 110 RSFKILRGHKASVHSIA-AETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQ 168
R +IL + H + E + SGS D T+ +W+ N N
Sbjct: 435 RCLEILVPSRLIRHGVEIVEPDQPYIVSGSRDHTLRVWKLPK-----NTDPPYLPDNTNS 489
Query: 169 VEEPQLEGEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKA 228
++ + + TL+GHT V ++ + + S S+D S+R W V G+ L + G +
Sbjct: 490 IDRWEKNPYFVHTLIGHTDSVRTISG-YGDILVSGSYDSSIRIWRVSTGECLYHLR-GHS 547
Query: 229 LNCIDIGGEGSALIAAGGS-DPILRIWDPRKPGTSAPVFQFSSHNSWISACK-WHNKSWF 286
L + E I GS D +R+WD GT V + H+++++ + N+
Sbjct: 548 LRIYSVLYEPERNICISGSMDKSIRVWD-LSTGTCKYVLE--GHDAFVTLLNVFQNR--- 601
Query: 287 HLISASYDGKVMLWDLRTAWPLSVIDSH 314
LIS S D + +WDL T PL V+ S+
Sbjct: 602 -LISGSADSTIRIWDLNTGKPLMVLPSN 628
Score = 131 (51.2 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 44/149 (29%), Positives = 70/149 (46%)
Query: 176 GEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDI 234
GE + L GH+ + SV++ P++ S S D S+R WD+ G + G +
Sbjct: 537 GECLYHLRGHSLRIYSVLYEPERNICISGSMDKSIRVWDLSTGT-CKYVLEGHDAFVTLL 595
Query: 235 GGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYD 294
+ LI+ G +D +RIWD T P+ S++ +IS+ S H I + D
Sbjct: 596 NVFQNRLIS-GSADSTIRIWDLN---TGKPLMVLPSNSGYISSFV----SDEHKIISGND 647
Query: 295 GKVMLWDLRTAWPLSVIDSHKDKVLCADW 323
G V LWD+RT L + + K+ D+
Sbjct: 648 GSVKLWDVRTGKLLRFLLTDLTKIWHVDF 676
>TAIR|locus:2008159 [details] [associations]
symbol:RACK1B_AT "AT1G48630" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0048364 "root development"
evidence=IGI] [GO:0048367 "shoot system development" evidence=IGI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IGI]
[GO:0009845 "seed germination" evidence=IGI] [GO:0042254 "ribosome
biogenesis" evidence=IGI] [GO:0071215 "cellular response to
abscisic acid stimulus" evidence=IEP] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0042545 "cell wall modification"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006417 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0042254 GO:GO:0048364 GO:GO:0009845 GO:GO:0004871
GO:GO:0071215 GO:GO:0048367 GO:GO:0022626 EMBL:AC073555 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AC074308 EMBL:AY059723 EMBL:AY091352 EMBL:AY087855 EMBL:Z26552
IPI:IPI00531991 RefSeq:NP_175296.1 UniGene:At.17343
ProteinModelPortal:Q9C4Z6 SMR:Q9C4Z6 IntAct:Q9C4Z6 STRING:Q9C4Z6
PaxDb:Q9C4Z6 PRIDE:Q9C4Z6 EnsemblPlants:AT1G48630.1 GeneID:841284
KEGG:ath:AT1G48630 GeneFarm:2979 TAIR:At1g48630 InParanoid:Q9C4Z6
OMA:NCKLRNT PhylomeDB:Q9C4Z6 Genevestigator:Q9C4Z6 Uniprot:Q9C4Z6
Length = 326
Score = 136 (52.9 bits), Expect = 6.0e-13, Sum P(2) = 6.0e-13
Identities = 43/142 (30%), Positives = 73/142 (51%)
Query: 179 ISTLVGHTQCVSSVVW-PQQ--ETIYSASWDHSVRTWDVEMGKDLSDIFCGKA--LNCID 233
IS GH + VS V + P TI SASWD +V+ W+++ K L + G + LN +
Sbjct: 142 ISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCK-LRNTLAGHSGYLNTVA 200
Query: 234 IGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASY 293
+ +GS L A+GG D ++ +WD + G ++ + + S C N+ W + A+
Sbjct: 201 VSPDGS-LCASGGKDGVILLWDLAE-GKK--LYSLEAGSIIHSLCFSPNRYW---LCAAT 253
Query: 294 DGKVMLWDLRTAWPLSVIDSHK 315
+ + +WDL + SV++ K
Sbjct: 254 ENSIRIWDLESK---SVVEDLK 272
Score = 121 (47.7 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 37/177 (20%), Positives = 72/177 (40%)
Query: 170 EEPQLEGEAISTLVGHTQCVSSVVWPQQ-ETIYSASWDHSVRTWDVEMGKDLSDIFCGKA 228
+E + G A + GH+ V VV + S SWD +R WD+ G+ F G
Sbjct: 47 KEDKSYGVAQRRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRR-FVGHT 105
Query: 229 LNCIDIG-GEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFH 287
+ + + + I + D +++W+ + + H W+S ++ +
Sbjct: 106 KDVLSVAFSTDNRQIVSASRDRTIKLWNTLGE-CKYTISEADGHKEWVSCVRFSPNTLVP 164
Query: 288 -LISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGGVDSKLCVSSG 343
++SAS+D V +W+L+ + + H + + ++ D LC S G
Sbjct: 165 TIVSASWDKTVKVWNLQNCKLRNTLAGHSGYL---------NTVAVSPDGSLCASGG 212
Score = 101 (40.6 bits), Expect = 6.0e-13, Sum P(2) = 6.0e-13
Identities = 42/134 (31%), Positives = 55/134 (41%)
Query: 23 HDDWVSAVDG--SNPGFILTGCYDNLGRVWK------AGGVCTHILEGHCGAVSSVNIIK 74
H D V+A+ N I+T D +WK + GV + GH V V ++
Sbjct: 14 HTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDV-VLS 72
Query: 75 SDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMV 134
SDG ++ + S D LRLW E R F GH V S+A T +
Sbjct: 73 SDG-QFAL--SGSWDGELRLWDLATGE------STRRFV---GHTKDVLSVAFSTDNRQI 120
Query: 135 CSGSWDCTISLWRT 148
S S D TI LW T
Sbjct: 121 VSASRDRTIKLWNT 134
Score = 43 (20.2 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 16/69 (23%), Positives = 33/69 (47%)
Query: 118 HKASVHSIAAET-SGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQ-VEEPQLE 175
H V +IA + +++ + S D +I LW+ D + V+ ++ G++ V++ L
Sbjct: 14 HTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYG-VAQRRMTGHSHFVQDVVLS 72
Query: 176 GEAISTLVG 184
+ L G
Sbjct: 73 SDGQFALSG 81
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 196 (74.1 bits), Expect = 7.6e-13, P = 7.6e-13
Identities = 91/342 (26%), Positives = 160/342 (46%)
Query: 23 HDDWVSAVDGSNPGFIL-TGCYDNLGRVW--KAGGVCTHILEGHCGAVSS-----VNIIK 74
H +WV V S G ++ TG DN R+W K+G L GH ++S ++++K
Sbjct: 185 HYNWVLCVSWSPDGEVIATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSLSWEPIHLVK 244
Query: 75 SDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMV 134
G K +A++SKD T+++W + V+ ++ + + GH SV + G ++
Sbjct: 245 P-GSK-PRLASSSKDGTIKIW-----DTVS---RVCQYT-MSGHTNSVSCVKWGGQG-LL 292
Query: 135 CSGSWDCTISLWRTND---------SDAAG-NQVSIKK----RKG--NNQVEEPQLEGEA 178
SGS D T+ +W N S A N +S+ R G ++ ++P EA
Sbjct: 293 YSGSHDRTVRVWDINSQGRCINILKSHAHWVNHLSLSTDYALRIGAFDHTGKKPSTPEEA 352
Query: 179 ISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWD-VEMGKDLSDIFCG--KALNCIDIG 235
+ + + + +E + +AS D+++ W+ ++ K ++ + G K +N +
Sbjct: 353 QKKALENYEKICKKNGNSEEMMVTASDDYTMFLWNPLKSTKPIARM-TGHQKLVNHVAFS 411
Query: 236 GEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDG 295
+G +++A D +++WD R G F+ H + + W + L+S S D
Sbjct: 412 PDGRYIVSAS-FDNSIKLWDGRD-GKFISTFR--GHVASVYQVAWSSDCRL-LVSCSKDT 466
Query: 296 KVMLWDLRTAWPLSV-IDSHKDKVLCADWW-RGDSVISGGVD 335
+ +WD+RT LSV + HKD+V DW G V SGG D
Sbjct: 467 TLKVWDVRTR-KLSVDLPGHKDEVYTVDWSVDGKRVCSGGKD 507
Score = 144 (55.7 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 69/306 (22%), Positives = 122/306 (39%)
Query: 38 ILTGCYDNLGRVWKAGGVCT-HILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWK 96
++TG DN R+W H L+GH V V+ DG +AT S D T+RLW
Sbjct: 159 MVTGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVSW-SPDG---EVIATGSMDNTIRLWD 214
Query: 97 FDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLW----RTNDSD 152
+ + + + S I +H + + + S S D TI +W R
Sbjct: 215 PKSGQCLGDALRGHSKWITSLSWEPIHLVKPGSKPRLA-SSSKDGTIKIWDTVSRVCQYT 273
Query: 153 AAG--NQVSIKKRKGNN-----------QVEEPQLEGEAISTLVGHTQCVSSVVWPQQET 199
+G N VS K G +V + +G I+ L H V+ +
Sbjct: 274 MSGHTNSVSCVKWGGQGLLYSGSHDRTVRVWDINSQGRCINILKSHAHWVNHLSLSTDYA 333
Query: 200 IYSASWDHSVR--TWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPR 257
+ ++DH+ + + E K + + + + C G ++ A D + +W+P
Sbjct: 334 LRIGAFDHTGKKPSTPEEAQKKALENY--EKI-CKKNGNSEEMMVTAS-DDYTMFLWNPL 389
Query: 258 KPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDK 317
K ++ P+ + + H ++ + + +++SAS+D + LWD R +S H
Sbjct: 390 K--STKPIARMTGHQKLVNHVAF-SPDGRYIVSASFDNSIKLWDGRDGKFISTFRGHVAS 446
Query: 318 VLCADW 323
V W
Sbjct: 447 VYQVAW 452
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 132 (51.5 bits), Expect = 9.0e-13, Sum P(2) = 9.0e-13
Identities = 40/149 (26%), Positives = 71/149 (47%)
Query: 195 PQQETIYSASWDHSVRTWDVEMGKDLSDIFC--GKALNCIDIGGEGSALIAAGGSDPILR 252
P I SAS D +V+ WD + ++ +C G + +D G+ +AA G D ++
Sbjct: 186 PDGRLIVSASDDKTVKLWD-KTSRECVHSYCEHGGFVTYVDFHPSGTC-VAAAGMDNTVK 243
Query: 253 IWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVID 312
+WD R T + + H++ ++A +H S +L++AS D + + DL L +
Sbjct: 244 VWDVR---THRLLQHYQLHSAAVNALSFH-PSGNYLVTASSDSTLKILDLMEGRLLYTLH 299
Query: 313 SHKDKVLCADWWR-GDSVISGGVDSKLCV 340
H+ + R G+ SGG D ++ V
Sbjct: 300 GHQGPATTVAFSRTGEYFASGGSDEQVMV 328
Score = 106 (42.4 bits), Expect = 9.0e-13, Sum P(2) = 9.0e-13
Identities = 39/127 (30%), Positives = 57/127 (44%)
Query: 23 HDDWVSAVDGSNPGFIL-TGCYDNLGRVWKAG--GVCTHILEGHCGAVSSVNIIKSDGLK 79
H D V+ V+ S G +L +G D R+W G T + H V SV+ SDG
Sbjct: 91 HKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGEST-VFRAHTATVRSVHFC-SDGQS 148
Query: 80 YVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSW 139
+VT AS D+T+++W H +K F + + H V G ++ S S
Sbjct: 149 FVT---ASDDKTIKVWS-------THRQKFL-FSLSQ-HINWVRCAKFSPDGRLIVSASD 196
Query: 140 DCTISLW 146
D T+ LW
Sbjct: 197 DKTVKLW 203
Score = 106 (42.4 bits), Expect = 9.0e-13, Sum P(2) = 9.0e-13
Identities = 42/141 (29%), Positives = 63/141 (44%)
Query: 17 EEEPSL------HDDWVSAVDGS-NPGFILTGCYDNLGRVWKAGGVC-THILEGHCGAVS 68
+E+PSL H D V+ VD S N + +G D+ VW + GH AV+
Sbjct: 37 QEDPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVT 96
Query: 69 SVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAE 128
VN S L +A+ S+D+T+R+W P + R H A+V S+
Sbjct: 97 CVNFSPSGHL----LASGSRDKTVRIWV---------PNIKGESTVFRAHTATVRSVHFC 143
Query: 129 TSGNMVCSGSWDCTISLWRTN 149
+ G + S D TI +W T+
Sbjct: 144 SDGQSFVTASDDKTIKVWSTH 164
Score = 47 (21.6 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 13/49 (26%), Positives = 20/49 (40%)
Query: 106 PKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAA 154
P R FK GH+ +V + + + SGS D + +W A
Sbjct: 40 PSLERHFK---GHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRA 85
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 133 (51.9 bits), Expect = 9.9e-13, Sum P(2) = 9.9e-13
Identities = 41/149 (27%), Positives = 71/149 (47%)
Query: 195 PQQETIYSASWDHSVRTWDVEMGKDLSDIFC--GKALNCIDIGGEGSALIAAGGSDPILR 252
P I SAS D +V+ WD + ++ +C G + +D G+ IAA G D ++
Sbjct: 155 PDGRLIVSASDDKTVKLWD-KTSRECVHSYCEHGGFVTYVDFHPSGTC-IAAAGMDNTVK 212
Query: 253 IWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVID 312
+WD R T + + H++ ++A +H S +L++AS D + + DL L +
Sbjct: 213 VWDVR---THRLLQHYQLHSAAVNALSFH-PSGNYLVTASSDSTLKILDLMEGRLLYTLH 268
Query: 313 SHKDKVLCADWWR-GDSVISGGVDSKLCV 340
H+ + R G+ SGG D ++ V
Sbjct: 269 GHQGPATTVAFSRTGEYFASGGSDEQVMV 297
Score = 106 (42.4 bits), Expect = 9.9e-13, Sum P(2) = 9.9e-13
Identities = 39/127 (30%), Positives = 57/127 (44%)
Query: 23 HDDWVSAVDGSNPGFIL-TGCYDNLGRVW--KAGGVCTHILEGHCGAVSSVNIIKSDGLK 79
H D V+ V+ S G +L +G D R+W G T + H V SV+ SDG
Sbjct: 60 HKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGEST-VFRAHTATVRSVHFC-SDGQS 117
Query: 80 YVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSW 139
+VT AS D+T+++W H +K F + + H V G ++ S S
Sbjct: 118 FVT---ASDDKTVKVWS-------THRQKFL-FSLSQ-HINWVRCAKFSPDGRLIVSASD 165
Query: 140 DCTISLW 146
D T+ LW
Sbjct: 166 DKTVKLW 172
Score = 106 (42.4 bits), Expect = 9.9e-13, Sum P(2) = 9.9e-13
Identities = 41/140 (29%), Positives = 63/140 (45%)
Query: 18 EEPSL------HDDWVSAVDGS-NPGFILTGCYDNLGRVWKAGGVC-THILEGHCGAVSS 69
E+PSL H D V++VD S N + +G D+ VW + GH AV+
Sbjct: 7 EDPSLERHFKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTC 66
Query: 70 VNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAET 129
VN S L +A+ S+D+T+R+W P + R H A+V S+ +
Sbjct: 67 VNFSPSGHL----LASGSRDKTVRIWV---------PNVKGESTVFRAHTATVRSVHFCS 113
Query: 130 SGNMVCSGSWDCTISLWRTN 149
G + S D T+ +W T+
Sbjct: 114 DGQSFVTASDDKTVKVWSTH 133
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 130 (50.8 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 41/149 (27%), Positives = 70/149 (46%)
Query: 195 PQQETIYSASWDHSVRTWDVEMGKDLSDIFC--GKALNCIDIGGEGSALIAAGGSDPILR 252
P I SAS D +V+ WD + ++ +C G + +D G+ IAA G D ++
Sbjct: 117 PDGRLIVSASDDKTVKLWD-KSSRECVHSYCEHGGFVTYVDFHPSGTC-IAAAGMDNTVK 174
Query: 253 IWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVID 312
+WD R T + + H++ ++ +H S +LI+AS D + + DL L +
Sbjct: 175 VWDVR---THRLLQHYQLHSAAVNGLSFH-PSGNYLITASSDSTLKILDLMEGRLLYTLH 230
Query: 313 SHKDKVLCADWWR-GDSVISGGVDSKLCV 340
H+ + R G+ SGG D ++ V
Sbjct: 231 GHQGPATTVAFSRTGEYFASGGSDEQVMV 259
Score = 106 (42.4 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 39/127 (30%), Positives = 57/127 (44%)
Query: 23 HDDWVSAVDGSNPGFIL-TGCYDNLGRVW--KAGGVCTHILEGHCGAVSSVNIIKSDGLK 79
H D V+ V+ S G +L +G D R+W G T + H V SV+ SDG
Sbjct: 22 HKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGEST-VFRAHTATVRSVHFC-SDGQS 79
Query: 80 YVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSW 139
+VT AS D+T+++W H +K F + + H V G ++ S S
Sbjct: 80 FVT---ASDDKTVKVW-------ATHRQKFL-FSLSQ-HINWVRCAKFSPDGRLIVSASD 127
Query: 140 DCTISLW 146
D T+ LW
Sbjct: 128 DKTVKLW 134
Score = 84 (34.6 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 26/88 (29%), Positives = 41/88 (46%)
Query: 62 GHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKAS 121
GH AV+ VN S L +A+ S+D+T+R+W P + R H A+
Sbjct: 21 GHKDAVTCVNFSPSGHL----LASGSRDKTVRIWV---------PNVKGESTVFRAHTAT 67
Query: 122 VHSIAAETSGNMVCSGSWDCTISLWRTN 149
V S+ + G + S D T+ +W T+
Sbjct: 68 VRSVHFCSDGQSFVTASDDKTVKVWATH 95
Score = 71 (30.1 bits), Expect = 6.4e-09, Sum P(2) = 6.4e-09
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 102 LVNHPK-KIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTN 149
+V H K + R+++ GHK +V + SG+++ SGS D T+ +W N
Sbjct: 6 MVWHMKPQSRAYRFT-GHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPN 53
>TAIR|locus:2092707 [details] [associations]
symbol:RACK1C_AT "AT3G18130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0048364 "root
development" evidence=IGI] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0009845 "seed germination" evidence=IGI]
[GO:0071215 "cellular response to abscisic acid stimulus"
evidence=IEP] [GO:0005829 "cytosol" evidence=RCA] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048364 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0048367 EMBL:AB020749 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AY050338 EMBL:AY101529 IPI:IPI00545680 RefSeq:NP_188441.1
UniGene:At.22741 ProteinModelPortal:Q9LV28 SMR:Q9LV28 IntAct:Q9LV28
STRING:Q9LV28 PaxDb:Q9LV28 PRIDE:Q9LV28 EnsemblPlants:AT3G18130.1
GeneID:821338 KEGG:ath:AT3G18130 GeneFarm:2980 TAIR:At3g18130
InParanoid:Q9LV28 OMA:NCKLRNS PhylomeDB:Q9LV28
Genevestigator:Q9LV28 Uniprot:Q9LV28
Length = 326
Score = 131 (51.2 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 41/137 (29%), Positives = 71/137 (51%)
Query: 184 GHTQCVSSVVW-PQQ--ETIYSASWDHSVRTWDVEMGKDLSDIFCGKA--LNCIDIGGEG 238
GH + VS V + P TI SASWD +V+ W+++ K L + G + LN + + +G
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCK-LRNSLVGHSGYLNTVAVSPDG 205
Query: 239 SALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVM 298
S L A+GG D ++ +WD + G ++ + + S C N+ W + A+ + +
Sbjct: 206 S-LCASGGKDGVILLWDLAE-GKK--LYSLEAGSIIHSLCFSPNRYW---LCAATENSIR 258
Query: 299 LWDLRTAWPLSVIDSHK 315
+WDL + SV++ K
Sbjct: 259 IWDLESK---SVVEDLK 272
Score = 117 (46.2 bits), Expect = 0.00028, P = 0.00028
Identities = 31/131 (23%), Positives = 58/131 (44%)
Query: 176 GEAISTLVGHTQCVSSVVWPQQ-ETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDI 234
G A L GH+ V VV + S SWD +R WD+ G + + F G + + +
Sbjct: 53 GVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATG-ETTRRFVGHTKDVLSV 111
Query: 235 G-GEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFH-LISAS 292
+ I + D +++W+ + + H W+S ++ + ++SAS
Sbjct: 112 AFSTDNRQIVSASRDRTIKLWNTLGE-CKYTISEGDGHKEWVSCVRFSPNTLVPTIVSAS 170
Query: 293 YDGKVMLWDLR 303
+D V +W+L+
Sbjct: 171 WDKTVKVWNLQ 181
Score = 102 (41.0 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 43/134 (32%), Positives = 55/134 (41%)
Query: 23 HDDWVSAVDG--SNPGFILTGCYDNLGRVWK------AGGVCTHILEGHCGAVSSVNIIK 74
H D V+A+ N I+T D +WK + GV L GH V V ++
Sbjct: 14 HTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDV-VLS 72
Query: 75 SDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMV 134
SDG ++ + S D LRLW E R F GH V S+A T +
Sbjct: 73 SDG-QFAL--SGSWDGELRLWDLATGETT------RRFV---GHTKDVLSVAFSTDNRQI 120
Query: 135 CSGSWDCTISLWRT 148
S S D TI LW T
Sbjct: 121 VSASRDRTIKLWNT 134
Score = 94 (38.1 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 28/96 (29%), Positives = 43/96 (44%)
Query: 53 GGVCTHILEGHCGAVSSVN--IIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIR 110
G V I+ H V+++ I SD + TAS+D+++ LWK ++ + R
Sbjct: 4 GLVLKGIMRAHTDIVTAIATPIDNSD-----IIVTASRDKSIILWKLTKDDKSYGVAQRR 58
Query: 111 SFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLW 146
L GH V + + G SGSWD + LW
Sbjct: 59 ----LTGHSHFVEDVVLSSDGQFALSGSWDGELRLW 90
Score = 57 (25.1 bits), Expect = 8.3e-08, Sum P(2) = 8.3e-08
Identities = 21/74 (28%), Positives = 38/74 (51%)
Query: 114 ILRGHKASVHSIAAET-SGNMVCSGSWDCTISLWR-TNDSDAAGNQVSIKKRKGNNQ-VE 170
I+R H V +IA + +++ + S D +I LW+ T D + G V+ ++ G++ VE
Sbjct: 10 IMRAHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYG--VAQRRLTGHSHFVE 67
Query: 171 EPQLEGEAISTLVG 184
+ L + L G
Sbjct: 68 DVVLSSDGQFALSG 81
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 157 (60.3 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 47/165 (28%), Positives = 75/165 (45%)
Query: 182 LVGHTQCVSSVVWPQQET-IYSASWDHSVRTWDVEMGKDLSDIFCGKA-LNCIDIGGEGS 239
L GH + + W + I SAS D +VR WDVE GK + + + +N G
Sbjct: 92 LKGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGP 151
Query: 240 ALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVML 299
LI +G D ++WD R+ G Q I+A + + + + + D V +
Sbjct: 152 PLIISGSDDGTAKLWDMRQRGA----IQTFPDKYQITAVSFSDAA-DKIFTGGVDNDVKV 206
Query: 300 WDLRTAWPLSVIDSHKDKV----LCADWWRGDSVISGGVDSKLCV 340
WDLR ++ H+D + L D G +++ G+D+KLCV
Sbjct: 207 WDLRKGEATMTLEGHQDTITGMSLSPD---GSYLLTNGMDNKLCV 248
Score = 120 (47.3 bits), Expect = 0.00014, P = 0.00014
Identities = 46/180 (25%), Positives = 78/180 (43%)
Query: 166 NNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIF 224
N + LE I L GH V ++ + P I S S D + W V +
Sbjct: 34 NGKNRTSSLEAP-IMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVL 92
Query: 225 CGKALNCIDIG--GEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHN 282
G +D+ +GS +++A D +R WD T + + + H+S++++C
Sbjct: 93 KGHKNAILDLHWTSDGSQIVSAS-PDKTVRAWDVE---TGKQIKKMAEHSSFVNSCCPTR 148
Query: 283 KSWFHLISASYDGKVMLWDLRTAWPLSVI-DSHK-DKVLCADWWRGDSVISGGVDSKLCV 340
+ +IS S DG LWD+R + D ++ V +D D + +GGVD+ + V
Sbjct: 149 RGPPLIISGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSD--AADKIFTGGVDNDVKV 206
Score = 88 (36.0 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 32/147 (21%), Positives = 58/147 (39%)
Query: 178 AISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGK-ALNCIDIGG 236
AI T Q + + I++ D+ V+ WD+ G+ + + + + +
Sbjct: 173 AIQTFPDKYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSP 232
Query: 237 EGSALIAAGGSDPILRIWD--PRKP-GTSAPVFQFSSHN--SWISACKWHNKSWFHLISA 291
+GS L+ G D L +WD P P +F+ HN + C W + + +
Sbjct: 233 DGSYLLT-NGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSW-SPDGTKVTAG 290
Query: 292 SYDGKVMLWDLRTAWPLSVIDSHKDKV 318
S D V +WD + + + H V
Sbjct: 291 SSDRMVHIWDTTSRRTIYKLPGHTGSV 317
Score = 82 (33.9 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 22/88 (25%), Positives = 43/88 (48%)
Query: 59 ILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGH 118
+L GH AV ++ + L +A+ S D+ + LW+ + ++F +L+GH
Sbjct: 48 LLSGHPSAVYTMKFNPAGTL----IASGSHDREIFLWRVHGD--------CKNFMVLKGH 95
Query: 119 KASVHSIAAETSGNMVCSGSWDCTISLW 146
K ++ + + G+ + S S D T+ W
Sbjct: 96 KNAILDLHWTSDGSQIVSASPDKTVRAW 123
Score = 79 (32.9 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 31/128 (24%), Positives = 55/128 (42%)
Query: 166 NNQVEEPQL-EGEAISTLVGHTQCVSSV-VWPQQETIYSASWDHSVRTWDVEMGKDLS-- 221
+N V+ L +GEA TL GH ++ + + P + + D+ + WD+ +
Sbjct: 201 DNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRC 260
Query: 222 -DIFCG-------KALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNS 273
IF G L C +G+ + AG SD ++ IWD T +++ H
Sbjct: 261 VKIFEGHQHNFEKNLLKC-SWSPDGTK-VTAGSSDRMVHIWDTTSRRT---IYKLPGHTG 315
Query: 274 WISACKWH 281
++ C +H
Sbjct: 316 SVNECVFH 323
Score = 73 (30.8 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 13/36 (36%), Positives = 23/36 (63%)
Query: 114 ILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTN 149
+L GH ++V+++ +G ++ SGS D I LWR +
Sbjct: 48 LLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVH 83
>ASPGD|ASPL0000005121 [details] [associations]
symbol:nudF species:162425 "Emericella nidulans"
[GO:0007097 "nuclear migration" evidence=IMP] [GO:0008017
"microtubule binding" evidence=IDA] [GO:0005816 "spindle pole body"
evidence=IDA] [GO:0048315 "conidium formation" evidence=IMP]
[GO:0043935 "sexual sporulation resulting in formation of a
cellular spore" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005881 "cytoplasmic microtubule" evidence=IEA] [GO:0051010
"microtubule plus-end binding" evidence=IEA] [GO:2000574
"regulation of microtubule motor activity" evidence=IMP]
[GO:0030473 "nuclear migration along microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005737
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301 GO:GO:0000922
GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 191 (72.3 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 54/195 (27%), Positives = 101/195 (51%)
Query: 152 DAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVR 210
+A+ + K + N + +P + TL H V+ V + P ++ S S D +++
Sbjct: 84 EASPSAARAKNQDPTNWLPKPS----STHTLTSHRDAVTCVAFHPVFTSLASGSEDCTIK 139
Query: 211 TWDVEMGKDLSDIFCG--KALNCIDIGGE-GSALIAAGGSDPILRIWDPRKPGTSAPVFQ 267
WD E+G ++ G + ++ +D GG+ G+ L+A+ SD +++WDP K A +
Sbjct: 140 IWDWELG-EIERTLKGHIRGVSGLDYGGQKGNTLLASCSSDLTIKLWDPSKD--YANIRT 196
Query: 268 FSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVL--CADWWR 325
S H+ +S+ ++ + HLISAS DG + +WD+ T + + VI S + + + +
Sbjct: 197 LSGHDHSVSSVRFLTSNDNHLISASRDGTLRIWDVSTGFCVKVIKSATESWIRDVSPSFD 256
Query: 326 GDSVISGGVDSKLCV 340
G ++SGG D + V
Sbjct: 257 GKWLVSGGRDQAITV 271
Score = 105 (42.0 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 42/154 (27%), Positives = 73/154 (47%)
Query: 176 GEAISTLVGHTQCVSSVVWPQQE---TIYSASWDHSVRTWDVEMGKDLSDI--FCGK--A 228
GE TL GH + VS + + Q+ + S S D +++ WD KD ++I G +
Sbjct: 146 GEIERTLKGHIRGVSGLDYGGQKGNTLLASCSSDLTIKLWDPS--KDYANIRTLSGHDHS 203
Query: 229 LNCID-IGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWI-SACKWHNKSWF 286
++ + + + LI+A D LRIWD G V + S+ SWI + W
Sbjct: 204 VSSVRFLTSNDNHLISAS-RDGTLRIWDV-STGFCVKVIK-SATESWIRDVSPSFDGKW- 259
Query: 287 HLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLC 320
L+S D + +W++ +A P + + H++ + C
Sbjct: 260 -LVSGGRDQAITVWEVSSAEPKAALLGHENFIEC 292
Score = 62 (26.9 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 15/47 (31%), Positives = 22/47 (46%)
Query: 100 EELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLW 146
++ N K S L H+ +V +A + SGS DCTI +W
Sbjct: 95 QDPTNWLPKPSSTHTLTSHRDAVTCVAFHPVFTSLASGSEDCTIKIW 141
>UNIPROTKB|Q00664 [details] [associations]
symbol:nudF "Nuclear distribution protein nudF"
species:227321 "Aspergillus nidulans FGSC A4" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
GO:GO:0000922 GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 191 (72.3 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 54/195 (27%), Positives = 101/195 (51%)
Query: 152 DAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVR 210
+A+ + K + N + +P + TL H V+ V + P ++ S S D +++
Sbjct: 84 EASPSAARAKNQDPTNWLPKPS----STHTLTSHRDAVTCVAFHPVFTSLASGSEDCTIK 139
Query: 211 TWDVEMGKDLSDIFCG--KALNCIDIGGE-GSALIAAGGSDPILRIWDPRKPGTSAPVFQ 267
WD E+G ++ G + ++ +D GG+ G+ L+A+ SD +++WDP K A +
Sbjct: 140 IWDWELG-EIERTLKGHIRGVSGLDYGGQKGNTLLASCSSDLTIKLWDPSKD--YANIRT 196
Query: 268 FSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVL--CADWWR 325
S H+ +S+ ++ + HLISAS DG + +WD+ T + + VI S + + + +
Sbjct: 197 LSGHDHSVSSVRFLTSNDNHLISASRDGTLRIWDVSTGFCVKVIKSATESWIRDVSPSFD 256
Query: 326 GDSVISGGVDSKLCV 340
G ++SGG D + V
Sbjct: 257 GKWLVSGGRDQAITV 271
Score = 105 (42.0 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 42/154 (27%), Positives = 73/154 (47%)
Query: 176 GEAISTLVGHTQCVSSVVWPQQE---TIYSASWDHSVRTWDVEMGKDLSDI--FCGK--A 228
GE TL GH + VS + + Q+ + S S D +++ WD KD ++I G +
Sbjct: 146 GEIERTLKGHIRGVSGLDYGGQKGNTLLASCSSDLTIKLWDPS--KDYANIRTLSGHDHS 203
Query: 229 LNCID-IGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWI-SACKWHNKSWF 286
++ + + + LI+A D LRIWD G V + S+ SWI + W
Sbjct: 204 VSSVRFLTSNDNHLISAS-RDGTLRIWDV-STGFCVKVIK-SATESWIRDVSPSFDGKW- 259
Query: 287 HLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLC 320
L+S D + +W++ +A P + + H++ + C
Sbjct: 260 -LVSGGRDQAITVWEVSSAEPKAALLGHENFIEC 292
Score = 62 (26.9 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 15/47 (31%), Positives = 22/47 (46%)
Query: 100 EELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLW 146
++ N K S L H+ +V +A + SGS DCTI +W
Sbjct: 95 QDPTNWLPKPSSTHTLTSHRDAVTCVAFHPVFTSLASGSEDCTIKIW 141
>CGD|CAL0004633 [details] [associations]
symbol:orf19.7343 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0046540 "U4/U6 x U5 tri-snRNP
complex" evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0004633 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 EMBL:AACQ01000069 KO:K12662 RefSeq:XP_716477.1
ProteinModelPortal:Q5A3W6 STRING:Q5A3W6 GeneID:3641939
KEGG:cal:CaO19.7343 Uniprot:Q5A3W6
Length = 458
Score = 162 (62.1 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 59/258 (22%), Positives = 112/258 (43%)
Query: 57 THILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILR 116
+ + G +S++ I +D KY+ A S D ++ L ++++L K F
Sbjct: 104 SQFIPGTTRTISNIKISNND--KYI--ACGSWDGSINL--LNSQDLSIFKKTPSGF---- 153
Query: 117 GHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQL-- 174
H + ++ + N + SG + TI++W N+++ N NN+ ++ L
Sbjct: 154 -HNEKISGLSWNNNDNQLVSGGNEGTINIWNVNENNNNNNN---NNNNNNNEKDQNGLLL 209
Query: 175 EGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDV-EMGKDLSDIFC------- 225
+S H ++ ++ P I S S+D + + WD+ ++ D+ C
Sbjct: 210 SSPIVSIKQAHNDRITKTLFHPINNLIISTSFDQTWKLWDLNKLSGQRDDLQCLVEQEGH 269
Query: 226 GKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSW 285
K + +I +G L +GG D I+ IWD R G S Q H + + W + +
Sbjct: 270 SKPIFTGEIHPDGG-LFMSGGLDGIVHIWDLRS-GRSIVTLQ--KHMAGVYCLDW-SPNG 324
Query: 286 FHLISASYDGKVMLWDLR 303
+ ++ S D + +WDLR
Sbjct: 325 YQFVTGSGDCSLKIWDLR 342
Score = 86 (35.3 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 25/106 (23%), Positives = 48/106 (45%)
Query: 184 GHTQCV-SSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKA-LNCIDIGGEGSAL 241
GH++ + + + P S D V WD+ G+ + + A + C+D G
Sbjct: 268 GHSKPIFTGEIHPDGGLFMSGGLDGIVHIWDLRSGRSIVTLQKHMAGVYCLDWSPNGYQF 327
Query: 242 IAAGGSDPILRIWDPRK---PGTSAPVFQFSSHNSWISACKWHNKS 284
+ G D L+IWD RK ++ ++ +H I+ K++++S
Sbjct: 328 VTGSG-DCSLKIWDLRKLENNNSNNELYSIPAHTKLITDVKFYHQS 372
Score = 72 (30.4 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 17/52 (32%), Positives = 25/52 (48%)
Query: 288 LISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADW-WRGDSVISGGVDSKL 338
L+S SYDG V +W + + H DKV+ D G ++S G D +
Sbjct: 403 LVSCSYDGDVNIWSSDNWIKIKSLRGHTDKVMSCDINSTGKWIVSSGWDRSI 454
Score = 52 (23.4 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 16/71 (22%), Positives = 33/71 (46%)
Query: 81 VTVATASKDQTLRLWKFDAEELVNHPK-KIRSFKILRGHKASVHSIAAETSGNMVCSGSW 139
+T S+D+ + + K + N K +I + + G ++ +I + + GSW
Sbjct: 73 LTTGIPSQDE-INILKSRRQLNSNLSKYEIYGSQFIPGTTRTISNIKISNNDKYIACGSW 131
Query: 140 DCTISLWRTND 150
D +I+L + D
Sbjct: 132 DGSINLLNSQD 142
>UNIPROTKB|Q5A3W6 [details] [associations]
symbol:PRP4 "Potential spliceosomal U4/U6 snRNP protein
Prp4p" species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0004633 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 EMBL:AACQ01000069 KO:K12662 RefSeq:XP_716477.1
ProteinModelPortal:Q5A3W6 STRING:Q5A3W6 GeneID:3641939
KEGG:cal:CaO19.7343 Uniprot:Q5A3W6
Length = 458
Score = 162 (62.1 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 59/258 (22%), Positives = 112/258 (43%)
Query: 57 THILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILR 116
+ + G +S++ I +D KY+ A S D ++ L ++++L K F
Sbjct: 104 SQFIPGTTRTISNIKISNND--KYI--ACGSWDGSINL--LNSQDLSIFKKTPSGF---- 153
Query: 117 GHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQL-- 174
H + ++ + N + SG + TI++W N+++ N NN+ ++ L
Sbjct: 154 -HNEKISGLSWNNNDNQLVSGGNEGTINIWNVNENNNNNNN---NNNNNNNEKDQNGLLL 209
Query: 175 EGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDV-EMGKDLSDIFC------- 225
+S H ++ ++ P I S S+D + + WD+ ++ D+ C
Sbjct: 210 SSPIVSIKQAHNDRITKTLFHPINNLIISTSFDQTWKLWDLNKLSGQRDDLQCLVEQEGH 269
Query: 226 GKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSW 285
K + +I +G L +GG D I+ IWD R G S Q H + + W + +
Sbjct: 270 SKPIFTGEIHPDGG-LFMSGGLDGIVHIWDLRS-GRSIVTLQ--KHMAGVYCLDW-SPNG 324
Query: 286 FHLISASYDGKVMLWDLR 303
+ ++ S D + +WDLR
Sbjct: 325 YQFVTGSGDCSLKIWDLR 342
Score = 86 (35.3 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 25/106 (23%), Positives = 48/106 (45%)
Query: 184 GHTQCV-SSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKA-LNCIDIGGEGSAL 241
GH++ + + + P S D V WD+ G+ + + A + C+D G
Sbjct: 268 GHSKPIFTGEIHPDGGLFMSGGLDGIVHIWDLRSGRSIVTLQKHMAGVYCLDWSPNGYQF 327
Query: 242 IAAGGSDPILRIWDPRK---PGTSAPVFQFSSHNSWISACKWHNKS 284
+ G D L+IWD RK ++ ++ +H I+ K++++S
Sbjct: 328 VTGSG-DCSLKIWDLRKLENNNSNNELYSIPAHTKLITDVKFYHQS 372
Score = 72 (30.4 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 17/52 (32%), Positives = 25/52 (48%)
Query: 288 LISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADW-WRGDSVISGGVDSKL 338
L+S SYDG V +W + + H DKV+ D G ++S G D +
Sbjct: 403 LVSCSYDGDVNIWSSDNWIKIKSLRGHTDKVMSCDINSTGKWIVSSGWDRSI 454
Score = 52 (23.4 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 16/71 (22%), Positives = 33/71 (46%)
Query: 81 VTVATASKDQTLRLWKFDAEELVNHPK-KIRSFKILRGHKASVHSIAAETSGNMVCSGSW 139
+T S+D+ + + K + N K +I + + G ++ +I + + GSW
Sbjct: 73 LTTGIPSQDE-INILKSRRQLNSNLSKYEIYGSQFIPGTTRTISNIKISNNDKYIACGSW 131
Query: 140 DCTISLWRTND 150
D +I+L + D
Sbjct: 132 DGSINLLNSQD 142
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 130 (50.8 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 41/149 (27%), Positives = 70/149 (46%)
Query: 195 PQQETIYSASWDHSVRTWDVEMGKDLSDIFC--GKALNCIDIGGEGSALIAAGGSDPILR 252
P I SAS D +V+ WD + ++ +C G + +D G+ IAA G D ++
Sbjct: 155 PDGRLIVSASDDKTVKLWD-KSSRECVHSYCEHGGFVTYVDFHPSGTC-IAAAGMDNTVK 212
Query: 253 IWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVID 312
+WD R T + + H++ ++ +H S +LI+AS D + + DL L +
Sbjct: 213 VWDVR---THRLLQHYQLHSAAVNGLSFH-PSGNYLITASSDSTLKILDLMEGRLLYTLH 268
Query: 313 SHKDKVLCADWWR-GDSVISGGVDSKLCV 340
H+ + R G+ SGG D ++ V
Sbjct: 269 GHQGPATTVAFSRTGEYFASGGSDEQVMV 297
Score = 106 (42.4 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 39/127 (30%), Positives = 57/127 (44%)
Query: 23 HDDWVSAVDGSNPGFIL-TGCYDNLGRVW--KAGGVCTHILEGHCGAVSSVNIIKSDGLK 79
H D V+ V+ S G +L +G D R+W G T + H V SV+ SDG
Sbjct: 60 HKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGEST-VFRAHTATVRSVHFC-SDGQS 117
Query: 80 YVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSW 139
+VT AS D+T+++W H +K F + + H V G ++ S S
Sbjct: 118 FVT---ASDDKTVKVW-------ATHRQKFL-FSLSQ-HINWVRCAKFSPDGRLIVSASD 165
Query: 140 DCTISLW 146
D T+ LW
Sbjct: 166 DKTVKLW 172
Score = 105 (42.0 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 41/140 (29%), Positives = 62/140 (44%)
Query: 18 EEPSL------HDDWVSAVDGS-NPGFILTGCYDNLGRVWKAGGVC-THILEGHCGAVSS 69
E+PSL H D V+ VD S N + +G D+ VW + GH AV+
Sbjct: 7 EDPSLERHFKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTC 66
Query: 70 VNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAET 129
VN S L +A+ S+D+T+R+W P + R H A+V S+ +
Sbjct: 67 VNFSPSGHL----LASGSRDKTVRIWV---------PNVKGESTVFRAHTATVRSVHFCS 113
Query: 130 SGNMVCSGSWDCTISLWRTN 149
G + S D T+ +W T+
Sbjct: 114 DGQSFVTASDDKTVKVWATH 133
Score = 49 (22.3 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 13/49 (26%), Positives = 20/49 (40%)
Query: 106 PKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAA 154
P R FK GH+ +V + + + SGS D + +W A
Sbjct: 9 PSLERHFK---GHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRA 54
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 191 (72.3 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 75/299 (25%), Positives = 138/299 (46%)
Query: 23 HDDWVSAVDGSNPGFILTGCYDNLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKYV 81
H+D V + ++TG DN +VW G + L GH G V + I + +Y+
Sbjct: 254 HEDHVITCMQIHDDVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCG--RYI 311
Query: 82 TVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDC 141
+ S D+T+++W L++ L+GH ++V +A +G+++ +GS D
Sbjct: 312 V--SGSTDRTVKVWSTVDGSLLH---------TLQGHTSTVRCMAM--AGSILVTGSRDT 358
Query: 142 TISLWRTND----SDAAGNQVSIK--KRKGNNQVE---EPQLE------GEAISTLVGHT 186
T+ +W + G+ +++ + G V + ++ G I TL GH
Sbjct: 359 TLRVWDVESGRHLATLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHN 418
Query: 187 QCVSSVVWPQQETIY-SASWDHSVRTWDVEM--GKDLSDIFCGKALNCIDIGGEGSALIA 243
V S+++ + +I S S D S+R WD G++ + G + G+ L++
Sbjct: 419 NRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLRGNILVS 478
Query: 244 AGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDL 302
+D +R+WD + GT V S H S I++ +W ++ + ++S DG V LWD+
Sbjct: 479 CN-ADSHVRVWDIHE-GTC--VHMLSGHRSAITSLQWFGRNM--VATSSDDGTVKLWDI 531
Score = 178 (67.7 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 72/310 (23%), Positives = 121/310 (39%)
Query: 44 DNLGRVWKAGGVC-THILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEEL 102
D + + W A + + +L GH V + I D L T S D TL++W D E+
Sbjct: 234 DKIEKNWNANPIMGSAVLRGHEDHVITCMQIHDDVL-----VTGSDDNTLKVWCIDKGEV 288
Query: 103 VNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDA--------- 153
+ L GH V + G + SGS D T+ +W T D
Sbjct: 289 MY---------TLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTS 339
Query: 154 -------AGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQETIYSASWD 206
AG+ + R +V + + G ++TL GH V V + T+ S +D
Sbjct: 340 TVRCMAMAGSILVTGSRDTTLRVWDVE-SGRHLATLHGHHAAVRCVQF-DGTTVVSGGYD 397
Query: 207 HSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGS-DPILRIWDPRKPGTSAPV 265
+V+ W+ G+ + + G + E I GS D +R+WD +P V
Sbjct: 398 FTVKIWNAHTGRCIRTL-TGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECV 456
Query: 266 FQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR 325
H S S + L+S + D V +WD+ + ++ H+ + W+
Sbjct: 457 ALLQGHTSLTSGMQLRGNI---LVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWF- 512
Query: 326 GDSVISGGVD 335
G ++++ D
Sbjct: 513 GRNMVATSSD 522
Score = 127 (49.8 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 52/216 (24%), Positives = 92/216 (42%)
Query: 38 ILTGCYDNLGRVWKA-GGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWK 96
++TG D RVW G L GH AV V DG TV + D T+++W
Sbjct: 351 LVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQF---DG---TTVVSGGYDFTVKIWN 404
Query: 97 FDA----EELVNHPKKIRSFKILRGHKASVHSIAAETS---GNMVCSGSWDCTISLWRTN 149
L H ++ S + ++ V S + +TS + +C ++L + +
Sbjct: 405 AHTGRCIRTLTGHNNRVYSL-LFESERSIVCSGSLDTSIRVWDFTRPEGQEC-VALLQGH 462
Query: 150 DSDAAGNQVS---IKKRKGNNQVEEPQL-EGEAISTLVGHTQCVSSVVWPQQETIYSASW 205
S +G Q+ + ++ V + EG + L GH ++S+ W + + ++S
Sbjct: 463 TSLTSGMQLRGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRNMVATSSD 522
Query: 206 DHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSAL 241
D +V+ WD+E G + D+ +D GG G +
Sbjct: 523 DGTVKLWDIERGALIRDLVT------LDSGGNGGCI 552
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 191 (72.3 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 75/299 (25%), Positives = 138/299 (46%)
Query: 23 HDDWVSAVDGSNPGFILTGCYDNLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKYV 81
H+D V + ++TG DN +VW G + L GH G V + I + +Y+
Sbjct: 254 HEDHVITCMQIHDDVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCG--RYI 311
Query: 82 TVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDC 141
+ S D+T+++W L++ L+GH ++V +A +G+++ +GS D
Sbjct: 312 V--SGSTDRTVKVWSTVDGSLLH---------TLQGHTSTVRCMAM--AGSILVTGSRDT 358
Query: 142 TISLWRTND----SDAAGNQVSIK--KRKGNNQVE---EPQLE------GEAISTLVGHT 186
T+ +W + G+ +++ + G V + ++ G I TL GH
Sbjct: 359 TLRVWDVESGRHLATLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHN 418
Query: 187 QCVSSVVWPQQETIY-SASWDHSVRTWDVEM--GKDLSDIFCGKALNCIDIGGEGSALIA 243
V S+++ + +I S S D S+R WD G++ + G + G+ L++
Sbjct: 419 NRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLRGNILVS 478
Query: 244 AGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDL 302
+D +R+WD + GT V S H S I++ +W ++ + ++S DG V LWD+
Sbjct: 479 CN-ADSHVRVWDIHE-GTC--VHMLSGHRSAITSLQWFGRNM--VATSSDDGTVKLWDI 531
Score = 178 (67.7 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 72/310 (23%), Positives = 121/310 (39%)
Query: 44 DNLGRVWKAGGVC-THILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEEL 102
D + + W A + + +L GH V + I D L T S D TL++W D E+
Sbjct: 234 DKIEKNWNANPIMGSAVLRGHEDHVITCMQIHDDVL-----VTGSDDNTLKVWCIDKGEV 288
Query: 103 VNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDA--------- 153
+ L GH V + G + SGS D T+ +W T D
Sbjct: 289 MY---------TLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTS 339
Query: 154 -------AGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQETIYSASWD 206
AG+ + R +V + + G ++TL GH V V + T+ S +D
Sbjct: 340 TVRCMAMAGSILVTGSRDTTLRVWDVE-SGRHLATLHGHHAAVRCVQF-DGTTVVSGGYD 397
Query: 207 HSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGS-DPILRIWDPRKPGTSAPV 265
+V+ W+ G+ + + G + E I GS D +R+WD +P V
Sbjct: 398 FTVKIWNAHTGRCIRTL-TGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECV 456
Query: 266 FQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR 325
H S S + L+S + D V +WD+ + ++ H+ + W+
Sbjct: 457 ALLQGHTSLTSGMQLRGNI---LVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWF- 512
Query: 326 GDSVISGGVD 335
G ++++ D
Sbjct: 513 GRNMVATSSD 522
Score = 127 (49.8 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 52/216 (24%), Positives = 92/216 (42%)
Query: 38 ILTGCYDNLGRVWKA-GGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWK 96
++TG D RVW G L GH AV V DG TV + D T+++W
Sbjct: 351 LVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQF---DG---TTVVSGGYDFTVKIWN 404
Query: 97 FDA----EELVNHPKKIRSFKILRGHKASVHSIAAETS---GNMVCSGSWDCTISLWRTN 149
L H ++ S + ++ V S + +TS + +C ++L + +
Sbjct: 405 AHTGRCIRTLTGHNNRVYSL-LFESERSIVCSGSLDTSIRVWDFTRPEGQEC-VALLQGH 462
Query: 150 DSDAAGNQVS---IKKRKGNNQVEEPQL-EGEAISTLVGHTQCVSSVVWPQQETIYSASW 205
S +G Q+ + ++ V + EG + L GH ++S+ W + + ++S
Sbjct: 463 TSLTSGMQLRGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRNMVATSSD 522
Query: 206 DHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSAL 241
D +V+ WD+E G + D+ +D GG G +
Sbjct: 523 DGTVKLWDIERGALIRDLVT------LDSGGNGGCI 552
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 189 (71.6 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 88/347 (25%), Positives = 137/347 (39%)
Query: 23 HDDWVSAVDGS-NPGFILTGCYDNLGRVW--KAGGVCTHILEGHCGAVSSVNI----IKS 75
H +WVS V + + I TG DN R W K G L H + ++ +
Sbjct: 176 HTNWVSCVAWAPDASIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLAP 235
Query: 76 DGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSG-NMV 134
D Y+ +A+ SKD T+R+W L+ F L GH A + + G N +
Sbjct: 236 DSGPYL-LASGSKDNTVRIWNVKLRTLL--------FT-LSGHTAPITCV--RWGGQNWI 283
Query: 135 CSGSWDCTISLWRTNDSD---------AAGNQVSIKK----RKG---NNQVEEPQLEGEA 178
S S+D TI +W D A N +S+ R G + + E
Sbjct: 284 YSSSYDKTIRIWDAKDGKCLHILKGHAARVNHLSLSTEHVLRSGAYDHTDFKPKSFSDER 343
Query: 179 ISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMG-KDLSDIFCG-KALNCIDIGG 236
+ C+ E + SAS D + WD + K ++ + K +N
Sbjct: 344 RKAKERYEACLKQ----SGERLVSASDDLQLILWDPQKSTKPITKMHGHQKVVNHASFSP 399
Query: 237 EGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGK 296
+G IA D +R+WD + T + H + + C W S L+S+S D
Sbjct: 400 DGRC-IATASFDSSVRLWDGK---TGKFLATLRGHVAAVYQCAWSTDSRL-LVSSSQDTT 454
Query: 297 VMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKLCVSS 342
+ +WD+R+ + H+D+V DW G V SGG D + + S
Sbjct: 455 LKVWDVRSKKMKFDLPGHEDQVFAVDWSPDGQRVASGGADKAVRIWS 501
Score = 175 (66.7 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 43/151 (28%), Positives = 72/151 (47%)
Query: 179 ISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIF----------CGK 227
I+T+ GHT VS V W P I + S D+++R WD + G + D C +
Sbjct: 170 IATMKGHTNWVSCVAWAPDASIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQ 229
Query: 228 ALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFH 287
L+ G L+A+G D +RIW+ + +F S H + I+ +W ++W +
Sbjct: 230 PLHLAP--DSGPYLLASGSKDNTVRIWNVK---LRTLLFTLSGHTAPITCVRWGGQNWIY 284
Query: 288 LISASYDGKVMLWDLRTAWPLSVIDSHKDKV 318
S+SYD + +WD + L ++ H +V
Sbjct: 285 --SSSYDKTIRIWDAKDGKCLHILKGHAARV 313
Score = 117 (46.2 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 45/165 (27%), Positives = 76/165 (46%)
Query: 181 TLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSA 240
TL GHT ++ V W Q IYS+S+D ++R WD + GK L I G A +
Sbjct: 264 TLSGHTAPITCVRWGGQNWIYSSSYDKTIRIWDAKDGKCLH-ILKGHAARVNHLSLSTEH 322
Query: 241 LIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLW 300
++ +G D KP + + + + AC +S L+SAS D +++LW
Sbjct: 323 VLRSGAYDHT-----DFKPKSFSDERRKAKER--YEACL--KQSGERLVSASDDLQLILW 373
Query: 301 D-LRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKLCVSSG 343
D ++ P++ + H+ V A + G + + DS + + G
Sbjct: 374 DPQKSTKPITKMHGHQKVVNHASFSPDGRCIATASFDSSVRLWDG 418
Score = 89 (36.4 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 27/101 (26%), Positives = 40/101 (39%)
Query: 56 CTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKIL 115
CT + GH G + S S + VT S D T RLW D + + +
Sbjct: 126 CTASMNGHDGTIISAQFSPSTSSRLVT---GSGDFTARLWDCDTQTPI---------ATM 173
Query: 116 RGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGN 156
+GH V +A +++ +GS D TI W G+
Sbjct: 174 KGHTNWVSCVAWAPDASIIATGSMDNTIRFWDPKKGSPIGD 214
>DICTYBASE|DDB_G0279801 [details] [associations]
symbol:pex7 "peroxisomal biogenesis factor 7"
species:44689 "Dictyostelium discoideum" [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA;ISS] [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=IEA;ISS] [GO:0007031
"peroxisome organization" evidence=ISS] [GO:0015031 "protein
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0279801 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007031 GO:GO:0016558 EMBL:AAFI02000033
HSSP:P46680 KO:K13341 OMA:GHEYAVR GO:GO:0005053 RefSeq:XP_641489.1
ProteinModelPortal:Q54WA3 STRING:Q54WA3 EnsemblProtists:DDB0233068
GeneID:8622229 KEGG:ddi:DDB_G0279801 InParanoid:Q54WA3
ProtClustDB:CLSZ2729075 PANTHER:PTHR22850:SF4 Uniprot:Q54WA3
Length = 316
Score = 157 (60.3 bits), Expect = 5.0e-12, Sum P(2) = 5.0e-12
Identities = 47/181 (25%), Positives = 83/181 (45%)
Query: 168 QVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIY-SASWDHSVRTWDVEMGKDLSDIFC 225
++ P+++ ++ T H C+ S +W P+ ++ S S D +++ WD + L+ I
Sbjct: 130 KIWNPRMD-RSLKTFREHRYCIYSAIWSPRNAHLFASVSGDRTLKIWDSRDNRSLNTIKA 188
Query: 226 G--KALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNK 283
+ L C D + G D +RIWD R P + + ++ C H++
Sbjct: 189 HDHEILTC-DWNKYNDKEVVTGSVDKTIRIWDIRYPDRPTTILRGHTYAVRRIKCSPHSE 247
Query: 284 SWFHLISASYDGKVMLWD-LRTAWPLSV-IDSHKDKVLCADW--WRGDSVISGGVDSKLC 339
S L S SYD V++WD R P+ +D H + V+ DW + + S D ++C
Sbjct: 248 SM--LASCSYDMSVIVWDRAREQDPIIARMDHHTEFVVGLDWNMFIDGQMASCSWDEQVC 305
Query: 340 V 340
V
Sbjct: 306 V 306
Score = 143 (55.4 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 47/186 (25%), Positives = 85/186 (45%)
Query: 137 GSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLE--GEAISTLVGHTQCVSSVVW 194
G +DCT W + +++ V+ G+ ++ + Q G I + HT+ V SV W
Sbjct: 60 GLYDCT---W-SEENEC---HVASSSGDGSIKIWDTQAPSGGRPIKSFEEHTKEVYSVDW 112
Query: 195 P--QQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCI--DIGGEGSA-LIAAGGSDP 249
++T + SWD S++ W+ M + L + CI I +A L A+ D
Sbjct: 113 NLVTKDTFITGSWDQSIKIWNPRMDRSLKTF--REHRYCIYSAIWSPRNAHLFASVSGDR 170
Query: 250 ILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTA-WPL 308
L+IWD R + + +H+ I C W+ + +++ S D + +WD+R P
Sbjct: 171 TLKIWDSRD---NRSLNTIKAHDHEILTCDWNKYNDKEVVTGSVDKTIRIWDIRYPDRPT 227
Query: 309 SVIDSH 314
+++ H
Sbjct: 228 TILRGH 233
Score = 122 (48.0 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 36/153 (23%), Positives = 65/153 (42%)
Query: 194 WPQQETIY--SASWDHSVRTWDVEM---GKDLSDIF-CGKALNCIDIGGEGSALIAAGGS 247
W ++ + S+S D S++ WD + G+ + K + +D G
Sbjct: 66 WSEENECHVASSSGDGSIKIWDTQAPSGGRPIKSFEEHTKEVYSVDWNLVTKDTFITGSW 125
Query: 248 DPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWP 307
D ++IW+PR + + F H I + W ++ S S D + +WD R
Sbjct: 126 DQSIKIWNPRMDRS---LKTFREHRYCIYSAIWSPRNAHLFASVSGDRTLKIWDSRDNRS 182
Query: 308 LSVIDSHKDKVLCADW--WRGDSVISGGVDSKL 338
L+ I +H ++L DW + V++G VD +
Sbjct: 183 LNTIKAHDHEILTCDWNKYNDKEVVTGSVDKTI 215
Score = 90 (36.7 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 25/132 (18%), Positives = 57/132 (43%)
Query: 175 EGEAISTLVGHTQCVSSVVWPQ--QETIYSASWDHSVRTWDVEMGKDLSDIFCGK--ALN 230
+ +++T+ H + + W + + + + S D ++R WD+ + I G A+
Sbjct: 179 DNRSLNTIKAHDHEILTCDWNKYNDKEVVTGSVDKTIRIWDIRYPDRPTTILRGHTYAVR 238
Query: 231 CIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLIS 290
I +++A+ D + +WD R + + H ++ W+ + S
Sbjct: 239 RIKCSPHSESMLASCSYDMSVIVWD-RAREQDPIIARMDHHTEFVVGLDWNMFIDGQMAS 297
Query: 291 ASYDGKVMLWDL 302
S+D +V +W+L
Sbjct: 298 CSWDEQVCVWNL 309
Score = 85 (35.0 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 29/103 (28%), Positives = 49/103 (47%)
Query: 52 AGGVCTHILEGHCGAVSSV--NIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKI 109
+GG E H V SV N++ D T T S DQ++++W +P+
Sbjct: 92 SGGRPIKSFEEHTKEVYSVDWNLVTKD-----TFITGSWDQSIKIW---------NPRMD 137
Query: 110 RSFKILRGHKASVHS-IAAETSGNMVCSGSWDCTISLWRTNDS 151
RS K R H+ ++S I + + ++ S S D T+ +W + D+
Sbjct: 138 RSLKTFREHRYCIYSAIWSPRNAHLFASVSGDRTLKIWDSRDN 180
Score = 67 (28.6 bits), Expect = 5.0e-12, Sum P(2) = 5.0e-12
Identities = 18/65 (27%), Positives = 31/65 (47%)
Query: 83 VATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAE-TSGNMVCSGSWDC 141
VA++S D ++++W A P R K H V+S+ + + +GSWD
Sbjct: 74 VASSSGDGSIKIWDTQA------PSGGRPIKSFEEHTKEVYSVDWNLVTKDTFITGSWDQ 127
Query: 142 TISLW 146
+I +W
Sbjct: 128 SIKIW 132
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 188 (71.2 bits), Expect = 5.4e-12, P = 5.4e-12
Identities = 79/305 (25%), Positives = 131/305 (42%)
Query: 55 VCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKI 114
V +GH A++SV+ S G + +ATAS D L LW N + R+F+
Sbjct: 9 VLERYFKGHKAAITSVDFSPS-GKQ---LATASWDTFLMLW--------NCKPQARAFRY 56
Query: 115 LRGHKASVHSIAAETSGNMVCSGSWDCTISLW----RTNDSDAAGNQVSIKKR--KGNNQ 168
+ GHK V S+ GN++ S S D T+ LW R S+ + ++ + Q
Sbjct: 57 V-GHKDVVTSVQFSPLGNLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQ 115
Query: 169 VEEPQLEGEAIS-----------TLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEM 216
E ++I +L HT V + P I S S D +++ WD
Sbjct: 116 FLATASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTT- 174
Query: 217 GKDLSDIFCGKA--LNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSW 274
K + F N +D G+ IA+ GSD ++IWD R + + + H+
Sbjct: 175 NKQCVNNFSDSVGFANFVDFNPNGTC-IASAGSDHTVKIWDIR---VNKLLQHYQVHSGG 230
Query: 275 ISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVIS-GG 333
++ +H S ++I+AS DG + + DL + + H V + +G + S GG
Sbjct: 231 VNCVSFH-PSGNYIITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFSSGG 289
Query: 334 VDSKL 338
D+++
Sbjct: 290 ADTQV 294
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 185 (70.2 bits), Expect = 5.8e-12, P = 5.8e-12
Identities = 48/162 (29%), Positives = 79/162 (48%)
Query: 181 TLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIG-GEG 238
TL GHT+ VS+V + P E + S+S D ++ W GK G L D+
Sbjct: 67 TLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGK-FEKTISGHKLGISDVAWSSD 125
Query: 239 SALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVM 298
S L+ +G D L++W+ G S + H++++ C ++ +S ++S S+D V
Sbjct: 126 SRLLVSGSDDKTLKVWE-LSTGKSLKTLK--GHSNYVFCCNFNPQSNL-IVSGSFDESVR 181
Query: 299 LWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKLC 339
+WD+RT L + +H D V + R G ++S D LC
Sbjct: 182 IWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LC 222
Score = 144 (55.7 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 44/168 (26%), Positives = 79/168 (47%)
Query: 175 EGEAISTLVGHTQCVSSVVWPQQETIY-SASWDHSVRTWDVEMGKDLSDIFC-GKALNCI 232
+G+ T+ GH +S V W + S S D +++ W++ GK L + + C
Sbjct: 103 DGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCC 162
Query: 233 DIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISAS 292
+ + S LI +G D +RIWD R T + +H+ +SA + N+ ++S+S
Sbjct: 163 NFNPQ-SNLIVSGSFDESVRIWDVR---TGKCLKTLPAHSDPVSAVHF-NRDGSLIVSSS 217
Query: 293 YDGKVMLWDLRTAWPL-SVIDSHKDKVLCADWW-RGDSVISGGVDSKL 338
YDG +WD + L ++ID V + G +++ +D+ L
Sbjct: 218 YDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTL 265
Score = 123 (48.4 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 37/159 (23%), Positives = 71/159 (44%)
Query: 176 GEAISTLVGHTQCVSSVVWPQQET-IYSASWDHSVRTWDVEMGKDLSDIFC--GKALNCI 232
G+ + TL H+ VS+V + + + I S+S+D R WD G+ L + ++ +
Sbjct: 188 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 247
Query: 233 DIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISAS 292
G ++AA D L++WD K G + + + + ++S S
Sbjct: 248 KFSPNGKYILAAT-LDNTLKLWDYSK-GKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGS 305
Query: 293 YDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVIS 331
D V +W+L++ + + H D VLC +++I+
Sbjct: 306 EDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTENIIA 344
Score = 122 (48.0 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 43/136 (31%), Positives = 59/136 (43%)
Query: 23 HDDWVSAVDGSNPG-FILTGCYDNLGRVWK-AGGVCTH-ILEGHCGAVSSVNIIKSDGLK 79
H D VSAV + G I++ YD L R+W A G C +++ VS V S K
Sbjct: 197 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKF--SPNGK 254
Query: 80 YVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAE---TSGNMVCS 136
Y+ AT D TL+LW + K + K GHK + I A T G + S
Sbjct: 255 YILAATL--DNTLKLWDYS---------KGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 303
Query: 137 GSWDCTISLWRTNDSD 152
GS D + +W +
Sbjct: 304 GSEDNMVYIWNLQSKE 319
Score = 101 (40.6 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 36/126 (28%), Positives = 56/126 (44%)
Query: 23 HDDWVSAVDGSNPG-FILTGCYDNLGRVWKA-GGVCTHILEGHCGAVSSVNIIKSDGLKY 80
H VSAV S G ++ + D L ++W A G + GH +S V SD
Sbjct: 71 HTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV-AWSSDSRLL 129
Query: 81 VTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWD 140
V+ S D+TL++W+ +S K L+GH V N++ SGS+D
Sbjct: 130 VS---GSDDKTLKVWELSTG---------KSLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 177
Query: 141 CTISLW 146
++ +W
Sbjct: 178 ESVRIW 183
Score = 52 (23.4 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 115 LRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTND 150
L GH +V ++ +G + S S D I +W D
Sbjct: 68 LAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYD 103
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 187 (70.9 bits), Expect = 7.0e-12, P = 7.0e-12
Identities = 77/305 (25%), Positives = 132/305 (43%)
Query: 55 VCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKI 114
V +GH A++S+++ +G + +ATAS D L LW F H R+++
Sbjct: 9 VLERYFKGHKAAITSLDL-SPNGKQ---LATASWDTFLMLWNFKP-----HA---RAYRY 56
Query: 115 LRGHKASVHSIAAETSGNMVCSGSWDCTISLW----RTNDSDAAGNQVSIKKR--KGNNQ 168
+ GHK V S+ GN++ S S D T+ LW R S+ + ++ + Q
Sbjct: 57 V-GHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQ 115
Query: 169 VEEPQLEGEAIS-----------TLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEM 216
E ++I +L HT V + P I S S D +++ WD
Sbjct: 116 FLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTT- 174
Query: 217 GKDLSDIFCGKA--LNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSW 274
K + F N +D G+ IA+ GSD +++WD R + + + H+
Sbjct: 175 NKQCVNNFSDSVGFANFVDFNPSGTC-IASAGSDQTVKVWDVR---VNKLLQHYQVHSGG 230
Query: 275 ISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVI-SGG 333
++ +H S +LI+AS DG + + DL + + H V + +G + SGG
Sbjct: 231 VNCISFH-PSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGG 289
Query: 334 VDSKL 338
D+++
Sbjct: 290 ADTQV 294
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 188 (71.2 bits), Expect = 8.7e-12, P = 8.7e-12
Identities = 78/245 (31%), Positives = 112/245 (45%)
Query: 23 HDDWVSAVDGSNPG-FILTGCYDNLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKY 80
H+ + ++D S+ G FI++G D R+W G C LE G V+++ I +D
Sbjct: 401 HEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETGQCILKLEIENG-VTAIAISPNDQF-- 457
Query: 81 VTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWD 140
+A S DQ +R+W LV L GHK SV+SIA +++ SGS D
Sbjct: 458 --IAVGSLDQIIRVWSVSGT-LVER---------LEGHKESVYSIAFSPDSSILLSGSLD 505
Query: 141 CTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSV-VWPQQET 199
TI +W + + G +IK P EG +T GHT V SV V P
Sbjct: 506 KTIKVWELQATRSVGLS-AIK----------P--EGICKATYTGHTDFVLSVAVSPDSRW 552
Query: 200 IYSASWDHSVRTWDVEMGKDLSDIFC-GKALNCIDI--GGEGSALIAAGGSDPILRIW-- 254
S S D S++ WD++ G+ S + C G + I + +G A+G D RIW
Sbjct: 553 GLSGSKDRSMQFWDLQTGQ--SYLTCQGHKNSVISVCFSPDGRQF-ASGSGDLRARIWSI 609
Query: 255 DPRKP 259
DP P
Sbjct: 610 DPASP 614
>FB|FBgn0035922 [details] [associations]
symbol:Pex7 "Peroxin 7" species:7227 "Drosophila
melanogaster" [GO:0007031 "peroxisome organization" evidence=ISS]
[GO:0005053 "peroxisome matrix targeting signal-2 binding"
evidence=ISS] [GO:0005777 "peroxisome" evidence=ISS] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA] [GO:0006911
"phagocytosis, engulfment" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006911 EMBL:AE014296 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016558 KO:K13341
OMA:GHEYAVR GO:GO:0005053 PANTHER:PTHR22850:SF4
GeneTree:ENSGT00700000104578 RefSeq:NP_001137914.1
RefSeq:NP_648251.1 UniGene:Dm.15472 SMR:Q9VSN7 DIP:DIP-21383N
IntAct:Q9VSN7 MINT:MINT-790667 STRING:Q9VSN7
EnsemblMetazoa:FBtr0076568 EnsemblMetazoa:FBtr0273328 GeneID:38994
KEGG:dme:Dmel_CG6486 UCSC:CG6486-RA FlyBase:FBgn0035922
InParanoid:Q9VSN7 OrthoDB:EOG431ZDN ChiTaRS:CG6486 GenomeRNAi:38994
NextBio:811365 Uniprot:Q9VSN7
Length = 339
Score = 123 (48.4 bits), Expect = 9.4e-12, Sum P(2) = 9.4e-12
Identities = 44/155 (28%), Positives = 71/155 (45%)
Query: 178 AISTLVGHTQCVSSVVW-PQQETIY-SASWDHSVRTWD-VEM-GKDLSDI--FCGKALNC 231
+I+T VGH + + P ++ S S D + W+ ++ GK L I +AL C
Sbjct: 159 SITTFVGHNDLIYGAKFSPLIANLFASVSTDGHLNLWNSLDFAGKPLMSIEAHASEAL-C 217
Query: 232 IDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWIS--ACKWHNKSWFHLI 289
D ++ GGSD ++R WD RK T VF+ S + AC H+ + L
Sbjct: 218 CDWSHFDRNVLVTGGSDGLIRGWDLRKMRTH--VFELYSGEFAVRRLACSPHSAAV--LA 273
Query: 290 SASYDGKVMLWDLRTAWPLSVIDSHKDKVLCA-DW 323
SA+YD +W+L +++ + +C DW
Sbjct: 274 SANYDFTTRIWNLERGESAQEVNARHTEFVCGLDW 308
Score = 117 (46.2 bits), Expect = 0.00030, P = 0.00030
Identities = 44/181 (24%), Positives = 78/181 (43%)
Query: 130 SGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCV 189
+ ++ + S D ++ +W D ++A NQ++ K +P + L H V
Sbjct: 82 AADIAATASGDGSLQIWCGLDGESASNQLTPK---------QPLI------CLQEHKNEV 126
Query: 190 SSVVWPQQ---ETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIA--- 243
S+ W ++ T+ S SWD +++ WD ++ F G N + G + S LIA
Sbjct: 127 YSLDWGEKWNYHTLLSGSWDCTLKLWDCNRQNSITT-FVGH--NDLIYGAKFSPLIANLF 183
Query: 244 -AGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDL 302
+ +D L +W+ P+ +H S C W + L++ DG + WDL
Sbjct: 184 ASVSTDGHLNLWNSLD-FAGKPLMSIEAHASEALCCDWSHFDRNVLVTGGSDGLIRGWDL 242
Query: 303 R 303
R
Sbjct: 243 R 243
Score = 105 (42.0 bits), Expect = 9.4e-12, Sum P(2) = 9.4e-12
Identities = 25/69 (36%), Positives = 37/69 (53%)
Query: 84 ATASKDQTLRLW-KFDAEELVNHPKKIRSFKILRGHKASVHSI--AAETSGNMVCSGSWD 140
ATAS D +L++W D E N + L+ HK V+S+ + + + + SGSWD
Sbjct: 87 ATASGDGSLQIWCGLDGESASNQLTPKQPLICLQEHKNEVYSLDWGEKWNYHTLLSGSWD 146
Query: 141 CTISLWRTN 149
CT+ LW N
Sbjct: 147 CTLKLWDCN 155
>ZFIN|ZDB-GENE-050417-342 [details] [associations]
symbol:nsmaf "neutral sphingomyelinase (N-SMase)
activation associated factor" species:7955 "Danio rerio"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Pfam:PF02893 ZFIN:ZDB-GENE-050417-342
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR004182 SMART:SM00568
Gene3D:1.10.1540.10 Gene3D:2.30.29.40 InterPro:IPR000409
InterPro:IPR023362 Pfam:PF02138 SMART:SM01026 SUPFAM:SSF81837
PROSITE:PS50197 GeneTree:ENSGT00670000097747 CTD:8439 EMBL:CR354563
EMBL:CU929087 IPI:IPI00497443 RefSeq:XP_003199050.1
UniGene:Dr.88496 Ensembl:ENSDART00000073635 GeneID:550506
KEGG:dre:550506 NextBio:20879748 ArrayExpress:F1QZ06 Bgee:F1QZ06
Uniprot:F1QZ06
Length = 911
Score = 190 (71.9 bits), Expect = 9.4e-12, P = 9.4e-12
Identities = 64/250 (25%), Positives = 115/250 (46%)
Query: 118 HKASVHSIAAETSGNMVCSGSWDCTISLWRTND--------SDAA--------GNQVSIK 161
HK +V +A SG+ + + S D T+ ++ + S+ A +++ +
Sbjct: 623 HKEAVTGVAVTLSGDSIFTTSQDSTLKMFSKENGLQRSVSFSNMALSSCLMLPDDKIVVC 682
Query: 162 KRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTW-----DVEM 216
NN G TL+GH VS + W + + +Y+ASWD +V+ W D+
Sbjct: 683 SSWDNNVYFYSIAYGRRQDTLMGHDDAVSDICW-RDDKLYTASWDSTVKVWECVAADISS 741
Query: 217 GK----D-LSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSH 271
K D L++ +N +D+ G+ L+A G + L +WD P PV Q + H
Sbjct: 742 NKRTQFDPLAEFEHEAGVNTLDLSPAGT-LLATGTKEGTLTVWDLASP---LPVNQLTCH 797
Query: 272 NSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKD-KVLCADWWRGDSVI 330
+ I + S H++S D +M+ D++T ++ I + ++ + C W G++V+
Sbjct: 798 SGKIHQVAFSPDSR-HILSVGEDSCLMVTDVQTGMLIATIPAEQEQRCFC---WDGNTVL 853
Query: 331 SGGVDSKLCV 340
SGG+ L V
Sbjct: 854 SGGISGDLSV 863
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 184 (69.8 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 76/305 (24%), Positives = 132/305 (43%)
Query: 55 VCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKI 114
V +GH A++S+++ +G + +ATAS D L LW F H R+++
Sbjct: 9 VLERYFKGHKAAITSLDL-SPNGKQ---LATASWDTFLMLWNFKP-----HA---RAYRY 56
Query: 115 LRGHKASVHSIAAETSGNMVCSGSWDCTISLW----RTNDSDAAGNQVSIKKR--KGNNQ 168
+ GHK V S+ GN++ S S D T+ LW R S+ + ++ + Q
Sbjct: 57 V-GHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQ 115
Query: 169 VEEPQLEGEAIS-----------TLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEM 216
E ++I +L HT V + P I S S D +++ WD
Sbjct: 116 FLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTT- 174
Query: 217 GKDLSDIFCGKA--LNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSW 274
K + F N +D G+ IA+ GSD +++WD R + + + H+
Sbjct: 175 NKQCVNNFSDSVGFANFVDFNPSGTC-IASAGSDQTVKVWDVR---VNKLLQHYQVHSGG 230
Query: 275 ISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVI-SGG 333
++ +H S +L++AS DG + + DL + + H V + +G + SGG
Sbjct: 231 VNCISFH-PSDNYLVTASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGG 289
Query: 334 VDSKL 338
D+++
Sbjct: 290 ADTQV 294
>UNIPROTKB|G4MQX3 [details] [associations]
symbol:MGG_04719 "Guanine nucleotide-binding protein
subunit beta-like protein" species:242507 "Magnaporthe oryzae
70-15" [GO:0005575 "cellular_component" evidence=ND] [GO:0043581
"mycelium development" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001231 GO:GO:0043581 KO:K14753
RefSeq:XP_003710816.1 ProteinModelPortal:G4MQX3 SMR:G4MQX3
EnsemblFungi:MGG_04719T0 GeneID:2677887 KEGG:mgr:MGG_04719
Uniprot:G4MQX3
Length = 316
Score = 117 (46.2 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 44/134 (32%), Positives = 60/134 (44%)
Query: 23 HDDWVSAVDGS--NPGFILTGCYDNLGRVWK------AGGVCTHILEGHCGAVSSVNIIK 74
H+ WV+++ S NP +L+ D +W + G L+GH VS +I
Sbjct: 14 HNGWVTSLATSMENPNMLLSSSRDKTLIIWNLTRDETSYGYPKRSLKGHSHIVSDC-VIS 72
Query: 75 SDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMV 134
SDG Y +AS D+TLRLW EL R F GH V S++ +
Sbjct: 73 SDGA-YAL--SASWDKTLRLW-----ELATGTTT-RRFV---GHTNDVLSVSFSADNRQI 120
Query: 135 CSGSWDCTISLWRT 148
SGS D +I LW T
Sbjct: 121 VSGSRDRSIKLWNT 134
Score = 109 (43.4 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 37/125 (29%), Positives = 62/125 (49%)
Query: 184 GHTQCVSSVVW---PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKA--LNCIDIGGEG 238
GH++ VS V + PQ I S+ WD V+ W++ K +D G +N + I +G
Sbjct: 146 GHSEWVSCVRFSPNPQNPVIVSSGWDKLVKVWELSSCKLQTD-HIGHTGYINTVTISPDG 204
Query: 239 SALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWH-NKSWFHLISASYDGKV 297
S L A+GG D +WD + S ++ ++ N I A + N+ W +AS +
Sbjct: 205 S-LCASGGKDGTTMLWDLNE---SKHLYSLNA-NDEIHALVFSPNRYWLCAATAS---SI 256
Query: 298 MLWDL 302
+++DL
Sbjct: 257 IIFDL 261
Score = 101 (40.6 bits), Expect = 7.9e-10, Sum P(2) = 7.9e-10
Identities = 29/89 (32%), Positives = 46/89 (51%)
Query: 60 LEGHCGAVSSV-NIIKSDGLKYVTVATASKDQTLRLWKFDAEEL-VNHPKKIRSFKILRG 117
LEGH G V+S+ +++ + + ++S+D+TL +W +E +PK RS L+G
Sbjct: 11 LEGHNGWVTSLATSMENPNM----LLSSSRDKTLIIWNLTRDETSYGYPK--RS---LKG 61
Query: 118 HKASVHSIAAETSGNMVCSGSWDCTISLW 146
H V + G S SWD T+ LW
Sbjct: 62 HSHIVSDCVISSDGAYALSASWDKTLRLW 90
Score = 78 (32.5 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 30/145 (20%), Positives = 58/145 (40%)
Query: 176 GEAISTLVGHTQCVSSVVWP-QQETIYSASWDHSVRTWDV--EMGKDLSDIFCGKALNCI 232
G VGHT V SV + I S S D S++ W+ + +++ + ++C+
Sbjct: 95 GTTTRRFVGHTNDVLSVSFSADNRQIVSGSRDRSIKLWNTLGDCKYTITEKGHSEWVSCV 154
Query: 233 DIG-GEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291
+ +I + G D ++++W+ H +I+ S
Sbjct: 155 RFSPNPQNPVIVSSGWDKLVKVWELSSCKLQT---DHIGHTGYINTVTISPDGSL-CASG 210
Query: 292 SYDGKVMLWDLRTAWPLSVIDSHKD 316
DG MLWDL + L ++++ +
Sbjct: 211 GKDGTTMLWDLNESKHLYSLNANDE 235
Score = 57 (25.1 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 14/63 (22%), Positives = 31/63 (49%)
Query: 153 AAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQ-ETIYSASWDHSVRT 211
A + + I + ++V+E + E A+ +C+S + W +T+++ D+ +R
Sbjct: 251 ATASSIIIFDLEKKSKVDELKPEFAAVGKKSREPECIS-LAWSADGQTLFAGYTDNIIRA 309
Query: 212 WDV 214
W V
Sbjct: 310 WGV 312
>UNIPROTKB|G4MXN3 [details] [associations]
symbol:MGG_01259 "Pre-mRNA splicing factor" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 KO:K12662 RefSeq:XP_003714171.1
ProteinModelPortal:G4MXN3 EnsemblFungi:MGG_01259T0 GeneID:2679643
KEGG:mgr:MGG_01259 Uniprot:G4MXN3
Length = 531
Score = 185 (70.2 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 61/197 (30%), Positives = 90/197 (45%)
Query: 150 DSDAAGNQVSIKKRKGNNQVEEPQLEGEA-ISTLVGHTQCVSSVVW-PQQETIYSASWDH 207
+S+ + V++ QV L + ++TL GHTQ V V + P + SAS D
Sbjct: 264 ESNVSAESVNLATGGAEGQVNLWSLSQDTPLATLSGHTQRVCRVDFHPSGRFLASASEDT 323
Query: 208 SVRTWDVEMGKDLS-DIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVF 266
S R WDVE +L + + + G+GS L+A+ G D I RIWD R G + +
Sbjct: 324 SWRLWDVEKRTELLLQEGHSRGVFAVSFNGDGS-LLASAGQDSIGRIWDLRT-GRTIMIL 381
Query: 267 Q--FSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWW 324
H I A W + ++SAS DG + WD+R + +H V W+
Sbjct: 382 DGHMDGHIKPIYALDWGSDG-HRVLSASADGWIKCWDVRKVQRTGGVGAHTSAVSDMRWF 440
Query: 325 RG-DSVISG---GVDSK 337
+G D + G GVD K
Sbjct: 441 KGLDGPLDGVPLGVDEK 457
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 184 (69.8 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 80/306 (26%), Positives = 133/306 (43%)
Query: 55 VCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKI 114
V +GH A++SV+ +G + +AT S D L LW P+ R+F+
Sbjct: 9 VLERYFKGHKAAITSVDF-SPNGKQ---LATGSWDTFLMLWSL-------RPQA-RAFRY 56
Query: 115 LRGHKASVHSIAAETSGNMVCSGSWDCTISLW----RTNDSDAAGNQVSIKKR--KGNNQ 168
+ GHK + S+ GN++ S S D TI LW R S+ + ++ + Q
Sbjct: 57 V-GHKDVITSVQFSPLGNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQ 115
Query: 169 VEEPQLEGEAIS-----------TLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDV-- 214
E ++I +L HT V + P I S S D +++ WD
Sbjct: 116 FLASASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTN 175
Query: 215 -EMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNS 273
+ + SD F G A N + G+ IA+ GSD ++IWD R + + + H+
Sbjct: 176 KQCVNNFSD-FVGFA-NFVAFNPNGTC-IASAGSDHTVKIWDIR---VNKLLQHYQVHSG 229
Query: 274 WISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVI-SG 332
++ +H S +LI+AS DG + + DL + + H V + +G + SG
Sbjct: 230 GVNCVSFH-PSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFTSG 288
Query: 333 GVDSKL 338
G D+++
Sbjct: 289 GADAQV 294
>TAIR|locus:2148965 [details] [associations]
symbol:TOZ "AT5G16750" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA;IMP]
[GO:0009880 "embryonic pattern specification" evidence=RCA;IMP]
[GO:0051301 "cell division" evidence=RCA;IMP] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010182 "sugar mediated signaling
pathway" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048366
"leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GO:GO:0005730 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0009880 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:AL391147 HOGENOM:HOG000188765
KO:K14555 OMA:ADSKLIR IPI:IPI00523827 PIR:T51507 RefSeq:NP_568338.2
UniGene:At.24110 ProteinModelPortal:Q9LFE2 SMR:Q9LFE2 STRING:Q9LFE2
PRIDE:Q9LFE2 EnsemblPlants:AT5G16750.1 GeneID:831538
KEGG:ath:AT5G16750 TAIR:At5g16750 InParanoid:Q9LFE2
PhylomeDB:Q9LFE2 ProtClustDB:CLSN2680022 Genevestigator:Q9LFE2
Uniprot:Q9LFE2
Length = 876
Score = 155 (59.6 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 52/213 (24%), Positives = 92/213 (43%)
Query: 28 SAVDGSNPGFILTGCYDNLGRVWKAGGV-CTHILEGHCGAVSSVNIIKSDGLKYVTVATA 86
+ V S I+TG D R+W A C + GH G + +V K +V+
Sbjct: 409 TCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVS---G 465
Query: 87 SKDQTLRLWKFDA-EELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISL 145
S D+TL++W D E P +++ ++ H ++S+A + ++VC+GS D T S+
Sbjct: 466 SGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASI 525
Query: 146 WRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQETIYSASW 205
WR D V + KG+ + ++ ST+ QCV + + I++ S
Sbjct: 526 WRLPDL------VHVVTLKGHKR----RIFSVEFSTV---DQCVMTASGDKTVKIWAISD 572
Query: 206 DHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEG 238
++T++ L F + G +G
Sbjct: 573 GSCLKTFEGHTSSVLRASFITDGTQFVSCGADG 605
Score = 146 (56.5 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 46/150 (30%), Positives = 70/150 (46%)
Query: 2 KVLEIEYIKAVAPQKEEEPSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKA-GGVCTHIL 60
+V ++E +K + K E + A S G + T D VW GG CTH
Sbjct: 85 RVWDLETLKCIRSWKGHEGPVMG---MACHASG-GLLATAGADRKVLVWDVDGGFCTHYF 140
Query: 61 EGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKA 120
GH G VSS+ + D K + ++ S D T+R+W +A+ N KK + I+ H +
Sbjct: 141 RGHKGVVSSI-LFHPDSNKNILIS-GSDDATVRVWDLNAK---NTEKKCLA--IMEKHFS 193
Query: 121 SVHSIAAETSGNMVCSGSWDCTISLWRTND 150
+V SIA G + S D ++LW +D
Sbjct: 194 AVTSIALSEDGLTLFSAGRDKVVNLWDLHD 223
Score = 109 (43.4 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 31/111 (27%), Positives = 57/111 (51%)
Query: 56 CTHILEGHCGAVSSVNI-IKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKI 114
C+++L GH V S++ + S G V + T SKD+T+RLW ++ + +
Sbjct: 393 CSYVLAGHKEVVLSLDTCVSSSG--NVLIVTGSKDKTVRLWNATSKSCIG---------V 441
Query: 115 LRGHKASVHSIA-AETSGNMVCSGSWDCTISLWRTND-SDAAGNQVSIKKR 163
GH + ++A A+ S + SGS D T+ +W + S+ + +++K R
Sbjct: 442 GTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISEDSEEPINLKTR 492
Score = 95 (38.5 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 33/119 (27%), Positives = 54/119 (45%)
Query: 48 RVWKAGGV-CTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHP 106
RVW + C +GH G V + S GL +ATA D+ + +W D ++
Sbjct: 85 RVWDLETLKCIRSWKGHEGPVMGMACHASGGL----LATAGADRKVLVWDVDGGFCTHY- 139
Query: 107 KKIRSFKILRGHKASVHSIA--AETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKR 163
RGHK V SI +++ N++ SGS D T+ +W N + ++I ++
Sbjct: 140 --------FRGHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEK 190
Score = 89 (36.4 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 37/173 (21%), Positives = 75/173 (43%)
Query: 170 EEPQLEGEAISTLVGHTQCVSSVVWPQQETIY-SASWDHSVRTWDVEMGKDLSDIFCGKA 228
EEP + + S + H + ++SV + +++ + S D + W + DL + K
Sbjct: 484 EEP-INLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLP---DLVHVVTLKG 539
Query: 229 ----LNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKS 284
+ ++ ++ A G D ++IW G+ F+ H S + +
Sbjct: 540 HKRRIFSVEFSTVDQCVMTASG-DKTVKIW-AISDGSCLKTFE--GHTSSVLRASFITDG 595
Query: 285 WFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLC-ADWWRGDSVISGGVDS 336
+S DG + LW++ T+ ++ D H+DKV A + + + +GG D+
Sbjct: 596 T-QFVSCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGKKTEMIATGGGDA 647
Score = 84 (34.6 bits), Expect = 5.9e-11, Sum P(2) = 5.9e-11
Identities = 33/140 (23%), Positives = 64/140 (45%)
Query: 169 VEEPQLEGEAISTLVGHTQCVSSVVW--PQQETIYSASWDHSVRTWDVEMGKDLSDIFCG 226
VEE +L LVG+ + ++ + + +++ + A+ VR +DV S + G
Sbjct: 343 VEETELV--LSKRLVGYNEEIADMKFLGDEEQFLAVATNLEEVRVYDVAT-MSCSYVLAG 399
Query: 227 --KALNCID--IGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHN 282
+ + +D + G+ LI G D +R+W+ + + + + HN I A +
Sbjct: 400 HKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNAT---SKSCIGVGTGHNGDILAVAFAK 456
Query: 283 KSWFHLISASYDGKVMLWDL 302
KS+ +S S D + +W L
Sbjct: 457 KSFSFFVSGSGDRTLKVWSL 476
Score = 66 (28.3 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 20/83 (24%), Positives = 38/83 (45%)
Query: 175 EGEAISTLVGHTQCVSSVVWPQQETIY-SASWDHSVRTWDVEMGKDLS--DIFCGKALNC 231
+G + T GHT V + T + S D ++ W+V + ++ D K
Sbjct: 572 DGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECIATYDQHEDKVW-A 630
Query: 232 IDIGGEGSALIAAGGSDPILRIW 254
+ +G + + +IA GG D ++ +W
Sbjct: 631 LAVGKK-TEMIATGGGDAVINLW 652
Score = 37 (18.1 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 13/53 (24%), Positives = 28/53 (52%)
Query: 271 HNSWISACKW-HNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCAD 322
+N I+ K+ ++ F ++ + + +V ++D+ T V+ HK+ VL D
Sbjct: 357 YNEEIADMKFLGDEEQFLAVATNLE-EVRVYDVATMSCSYVLAGHKEVVLSLD 408
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 178 (67.7 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 48/162 (29%), Positives = 77/162 (47%)
Query: 181 TLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIG-GEG 238
TL GHT+ VSSV + P E + S+S D ++ W GK G L D+
Sbjct: 14 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-FEKTISGHKLGISDVAWSSD 72
Query: 239 SALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVM 298
S L+ + D L+IWD G + H++++ C ++ +S ++S S+D V
Sbjct: 73 SNLLVSASDDKTLKIWDVSS-GKCLKTLK--GHSNYVFCCNFNPQSNL-IVSGSFDESVR 128
Query: 299 LWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKLC 339
+WD++T L + +H D V + R G ++S D LC
Sbjct: 129 IWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LC 169
Score = 169 (64.5 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 64/245 (26%), Positives = 108/245 (44%)
Query: 115 LRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSD----AAGNQVSIKK---RKGNN 167
L GH +V S+ +G + S S D I +W D +G+++ I +N
Sbjct: 15 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN 74
Query: 168 QV----EEPQLE------GEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEM 216
+ ++ L+ G+ + TL GH+ V + PQ I S S+D SVR WDV+
Sbjct: 75 LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 134
Query: 217 GKDLSDIFC-GKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWI 275
GK L + ++ + +GS LI + D + RIWD G N +
Sbjct: 135 GKCLKTLPAHSDPVSAVHFNRDGS-LIVSSSYDGLCRIWDTAS-GQCLKTL-IDDDNPPV 191
Query: 276 SACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLC--ADW--WRGDSVIS 331
S K+ + + ++++A+ D + LWD L HK++ C A++ G ++S
Sbjct: 192 SFVKF-SPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 250
Query: 332 GGVDS 336
G D+
Sbjct: 251 GSEDN 255
Score = 121 (47.7 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 43/130 (33%), Positives = 58/130 (44%)
Query: 23 HDDWVSAVDGSNPG-FILTGCYDNLGRVWK-AGGVCTH-ILEGHCGAVSSVNIIKSDGLK 79
H D VSAV + G I++ YD L R+W A G C +++ VS V S K
Sbjct: 144 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKF--SPNGK 201
Query: 80 YVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAE---TSGNMVCS 136
Y+ AT D TL+LW + K + K GHK + I A T G + S
Sbjct: 202 YILAATL--DNTLKLWDYS---------KGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 250
Query: 137 GSWDCTISLW 146
GS D + +W
Sbjct: 251 GSEDNLVYIW 260
Score = 112 (44.5 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 35/147 (23%), Positives = 65/147 (44%)
Query: 176 GEAISTLVGHTQCVSSVVWPQQET-IYSASWDHSVRTWDVEMGKDLSDIFC--GKALNCI 232
G+ + TL H+ VS+V + + + I S+S+D R WD G+ L + ++ +
Sbjct: 135 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 194
Query: 233 DIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISAS 292
G ++AA D L++WD K G + + + + ++S S
Sbjct: 195 KFSPNGKYILAAT-LDNTLKLWDYSK-GKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGS 252
Query: 293 YDGKVMLWDLRTAWPLSVIDSHKDKVL 319
D V +W+L+T + + H D V+
Sbjct: 253 EDNLVYIWNLQTKEIVQKLQGHTDVVI 279
Score = 96 (38.9 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 33/126 (26%), Positives = 56/126 (44%)
Query: 23 HDDWVSAVDGSNPG-FILTGCYDNLGRVWKA-GGVCTHILEGHCGAVSSVNIIKSDGLKY 80
H VS+V S G ++ + D L ++W A G + GH +S V L
Sbjct: 18 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNL-- 75
Query: 81 VTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWD 140
+ +AS D+TL++W + + + K L+GH V N++ SGS+D
Sbjct: 76 --LVSASDDKTLKIWDVSSGKCL---------KTLKGHSNYVFCCNFNPQSNLIVSGSFD 124
Query: 141 CTISLW 146
++ +W
Sbjct: 125 ESVRIW 130
Score = 82 (33.9 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 26/88 (29%), Positives = 44/88 (50%)
Query: 60 LEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLW-KFDAEELVNHPKKIRSFKILRGH 118
L GH AVSSV S +++ A++S D+ +++W +D K K + GH
Sbjct: 15 LAGHTKAVSSVKF--SPNGEWL--ASSSADKLIKIWGAYDG--------KFE--KTISGH 60
Query: 119 KASVHSIAAETSGNMVCSGSWDCTISLW 146
K + +A + N++ S S D T+ +W
Sbjct: 61 KLGISDVAWSSDSNLLVSASDDKTLKIW 88
Score = 49 (22.3 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 177 EAISTLVGHTQCV-SSVVWPQQETIYSASW--DHSVRTW 212
E + L GHT V S+ P + I SA+ D +++ W
Sbjct: 266 EIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 304
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 178 (67.7 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 48/162 (29%), Positives = 77/162 (47%)
Query: 181 TLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIG-GEG 238
TL GHT+ VSSV + P E + S+S D ++ W GK G L D+
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-FEKTISGHKLGISDVAWSSD 98
Query: 239 SALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVM 298
S L+ + D L+IWD G + H++++ C ++ +S ++S S+D V
Sbjct: 99 SNLLVSASDDKTLKIWDVSS-GKCLKTLK--GHSNYVFCCNFNPQSNL-IVSGSFDESVR 154
Query: 299 LWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKLC 339
+WD++T L + +H D V + R G ++S D LC
Sbjct: 155 IWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LC 195
Score = 168 (64.2 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 64/245 (26%), Positives = 108/245 (44%)
Query: 115 LRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSD----AAGNQVSIKK---RKGNN 167
L GH +V S+ +G + S S D I +W D +G+++ I +N
Sbjct: 41 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN 100
Query: 168 QV----EEPQLE------GEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEM 216
+ ++ L+ G+ + TL GH+ V + PQ I S S+D SVR WDV+
Sbjct: 101 LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 160
Query: 217 GKDLSDIFC-GKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWI 275
GK L + ++ + +GS LI + D + RIWD G N +
Sbjct: 161 GKCLKTLPAHSDPVSAVHFNRDGS-LIVSSSYDGLCRIWDTAS-GQCLKTL-IDDDNPPV 217
Query: 276 SACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLC--ADW--WRGDSVIS 331
S K+ + + ++++A+ D + LWD L HK++ C A++ G ++S
Sbjct: 218 SFVKF-SPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVTGGKWIVS 276
Query: 332 GGVDS 336
G D+
Sbjct: 277 GSEDN 281
Score = 118 (46.6 bits), Expect = 0.00023, P = 0.00023
Identities = 38/127 (29%), Positives = 60/127 (47%)
Query: 23 HDDWVSAVDGSNPG-FILTGCYDNLGRVWK-AGGVCTH-ILEGHCGAVSSVNIIKSDGLK 79
H D VSAV + G I++ YD L R+W A G C +++ VS V S K
Sbjct: 170 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKF--SPNGK 227
Query: 80 YVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSW 139
Y+ AT D TL+LW + + K ++++ + K + + + T G + SGS
Sbjct: 228 YILAATL--DNTLKLWDY------SKGKCLKTYTCHKNEKYCIFANFSVTGGKWIVSGSE 279
Query: 140 DCTISLW 146
D + +W
Sbjct: 280 DNLVYIW 286
Score = 114 (45.2 bits), Expect = 8.3e-10, Sum P(2) = 8.3e-10
Identities = 35/147 (23%), Positives = 65/147 (44%)
Query: 176 GEAISTLVGHTQCVSSVVWPQQET-IYSASWDHSVRTWDVEMGKDLSDIFC--GKALNCI 232
G+ + TL H+ VS+V + + + I S+S+D R WD G+ L + ++ +
Sbjct: 161 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 220
Query: 233 DIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISAS 292
G ++AA D L++WD K G + + + + ++S S
Sbjct: 221 KFSPNGKYILAAT-LDNTLKLWDYSK-GKCLKTYTCHKNEKYCIFANFSVTGGKWIVSGS 278
Query: 293 YDGKVMLWDLRTAWPLSVIDSHKDKVL 319
D V +W+L+T + + H D V+
Sbjct: 279 EDNLVYIWNLQTKEVVQKLQGHTDVVI 305
Score = 96 (38.9 bits), Expect = 8.3e-10, Sum P(2) = 8.3e-10
Identities = 33/126 (26%), Positives = 56/126 (44%)
Query: 23 HDDWVSAVDGSNPG-FILTGCYDNLGRVWKA-GGVCTHILEGHCGAVSSVNIIKSDGLKY 80
H VS+V S G ++ + D L ++W A G + GH +S V L
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNL-- 101
Query: 81 VTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWD 140
+ +AS D+TL++W + + + K L+GH V N++ SGS+D
Sbjct: 102 --LVSASDDKTLKIWDVSSGKCL---------KTLKGHSNYVFCCNFNPQSNLIVSGSFD 150
Query: 141 CTISLW 146
++ +W
Sbjct: 151 ESVRIW 156
Score = 89 (36.4 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 33/134 (24%), Positives = 56/134 (41%)
Query: 17 EEEPSLHDDWVSAVDGSNPGFILTGCYDNLG-RVWK-AGGVCTHILEGHCGAVSSVNIIK 74
E+ S H +S V S+ +L D+ ++W + G C L+GH V N
Sbjct: 80 EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP 139
Query: 75 SDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMV 134
L + + S D+++R+W D K + K L H V ++ G+++
Sbjct: 140 QSNL----IVSGSFDESVRIW--DV-------KTGKCLKTLPAHSDPVSAVHFNRDGSLI 186
Query: 135 CSGSWDCTISLWRT 148
S S+D +W T
Sbjct: 187 VSSSYDGLCRIWDT 200
Score = 86 (35.3 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 32/131 (24%), Positives = 56/131 (42%)
Query: 176 GEAISTLVGHTQC-VSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALN-CI 232
G+ + TL+ VS V + P + I +A+ D++++ WD GK L C K CI
Sbjct: 203 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKYCI 262
Query: 233 --DIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWH-NKSWFHLI 289
+ G I +G D ++ IW+ + T V + H + + H ++
Sbjct: 263 FANFSVTGGKWIVSGSEDNLVYIWNLQ---TKEVVQKLQGHTDVVISTACHPTENIIASA 319
Query: 290 SASYDGKVMLW 300
+ D + LW
Sbjct: 320 ALENDKTIKLW 330
Score = 82 (33.9 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 26/88 (29%), Positives = 44/88 (50%)
Query: 60 LEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLW-KFDAEELVNHPKKIRSFKILRGH 118
L GH AVSSV S +++ A++S D+ +++W +D K K + GH
Sbjct: 41 LAGHTKAVSSVKF--SPNGEWL--ASSSADKLIKIWGAYDG--------KFE--KTISGH 86
Query: 119 KASVHSIAAETSGNMVCSGSWDCTISLW 146
K + +A + N++ S S D T+ +W
Sbjct: 87 KLGISDVAWSSDSNLLVSASDDKTLKIW 114
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 178 (67.7 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 48/162 (29%), Positives = 77/162 (47%)
Query: 181 TLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIG-GEG 238
TL GHT+ VSSV + P E + S+S D ++ W GK G L D+
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-FEKTISGHKLGISDVAWSSD 98
Query: 239 SALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVM 298
S L+ + D L+IWD G + H++++ C ++ +S ++S S+D V
Sbjct: 99 SNLLVSASDDKTLKIWDVSS-GKCLKTLK--GHSNYVFCCNFNPQSNL-IVSGSFDESVR 154
Query: 299 LWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKLC 339
+WD++T L + +H D V + R G ++S D LC
Sbjct: 155 IWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LC 195
Score = 169 (64.5 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 64/245 (26%), Positives = 108/245 (44%)
Query: 115 LRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSD----AAGNQVSIKK---RKGNN 167
L GH +V S+ +G + S S D I +W D +G+++ I +N
Sbjct: 41 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN 100
Query: 168 QV----EEPQLE------GEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEM 216
+ ++ L+ G+ + TL GH+ V + PQ I S S+D SVR WDV+
Sbjct: 101 LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 160
Query: 217 GKDLSDIFC-GKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWI 275
GK L + ++ + +GS LI + D + RIWD G N +
Sbjct: 161 GKCLKTLPAHSDPVSAVHFNRDGS-LIVSSSYDGLCRIWDTAS-GQCLKTL-IDDDNPPV 217
Query: 276 SACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLC--ADW--WRGDSVIS 331
S K+ + + ++++A+ D + LWD L HK++ C A++ G ++S
Sbjct: 218 SFVKF-SPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 276
Query: 332 GGVDS 336
G D+
Sbjct: 277 GSEDN 281
Score = 121 (47.7 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 43/130 (33%), Positives = 58/130 (44%)
Query: 23 HDDWVSAVDGSNPG-FILTGCYDNLGRVWK-AGGVCTH-ILEGHCGAVSSVNIIKSDGLK 79
H D VSAV + G I++ YD L R+W A G C +++ VS V S K
Sbjct: 170 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKF--SPNGK 227
Query: 80 YVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAE---TSGNMVCS 136
Y+ AT D TL+LW + K + K GHK + I A T G + S
Sbjct: 228 YILAATL--DNTLKLWDYS---------KGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 276
Query: 137 GSWDCTISLW 146
GS D + +W
Sbjct: 277 GSEDNLVYIW 286
Score = 112 (44.5 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 35/147 (23%), Positives = 65/147 (44%)
Query: 176 GEAISTLVGHTQCVSSVVWPQQET-IYSASWDHSVRTWDVEMGKDLSDIFC--GKALNCI 232
G+ + TL H+ VS+V + + + I S+S+D R WD G+ L + ++ +
Sbjct: 161 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 220
Query: 233 DIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISAS 292
G ++AA D L++WD K G + + + + ++S S
Sbjct: 221 KFSPNGKYILAAT-LDNTLKLWDYSK-GKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGS 278
Query: 293 YDGKVMLWDLRTAWPLSVIDSHKDKVL 319
D V +W+L+T + + H D V+
Sbjct: 279 EDNLVYIWNLQTKEIVQKLQGHTDVVI 305
Score = 96 (38.9 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 33/126 (26%), Positives = 56/126 (44%)
Query: 23 HDDWVSAVDGSNPG-FILTGCYDNLGRVWKA-GGVCTHILEGHCGAVSSVNIIKSDGLKY 80
H VS+V S G ++ + D L ++W A G + GH +S V L
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNL-- 101
Query: 81 VTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWD 140
+ +AS D+TL++W + + + K L+GH V N++ SGS+D
Sbjct: 102 --LVSASDDKTLKIWDVSSGKCL---------KTLKGHSNYVFCCNFNPQSNLIVSGSFD 150
Query: 141 CTISLW 146
++ +W
Sbjct: 151 ESVRIW 156
Score = 82 (33.9 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 26/88 (29%), Positives = 44/88 (50%)
Query: 60 LEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLW-KFDAEELVNHPKKIRSFKILRGH 118
L GH AVSSV S +++ A++S D+ +++W +D K K + GH
Sbjct: 41 LAGHTKAVSSVKF--SPNGEWL--ASSSADKLIKIWGAYDG--------KFE--KTISGH 86
Query: 119 KASVHSIAAETSGNMVCSGSWDCTISLW 146
K + +A + N++ S S D T+ +W
Sbjct: 87 KLGISDVAWSSDSNLLVSASDDKTLKIW 114
Score = 49 (22.3 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 177 EAISTLVGHTQCV-SSVVWPQQETIYSASW--DHSVRTW 212
E + L GHT V S+ P + I SA+ D +++ W
Sbjct: 292 EIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 178 (67.7 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 48/162 (29%), Positives = 77/162 (47%)
Query: 181 TLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIG-GEG 238
TL GHT+ VSSV + P E + S+S D ++ W GK G L D+
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-FEKTISGHKLGISDVAWSSD 98
Query: 239 SALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVM 298
S L+ + D L+IWD G + H++++ C ++ +S ++S S+D V
Sbjct: 99 SNLLVSASDDKTLKIWDVSS-GKCLKTLK--GHSNYVFCCNFNPQSNL-IVSGSFDESVR 154
Query: 299 LWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKLC 339
+WD++T L + +H D V + R G ++S D LC
Sbjct: 155 IWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LC 195
Score = 169 (64.5 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 64/245 (26%), Positives = 108/245 (44%)
Query: 115 LRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSD----AAGNQVSIKK---RKGNN 167
L GH +V S+ +G + S S D I +W D +G+++ I +N
Sbjct: 41 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN 100
Query: 168 QV----EEPQLE------GEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEM 216
+ ++ L+ G+ + TL GH+ V + PQ I S S+D SVR WDV+
Sbjct: 101 LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 160
Query: 217 GKDLSDIFC-GKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWI 275
GK L + ++ + +GS LI + D + RIWD G N +
Sbjct: 161 GKCLKTLPAHSDPVSAVHFNRDGS-LIVSSSYDGLCRIWDTAS-GQCLKTL-IDDDNPPV 217
Query: 276 SACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLC--ADW--WRGDSVIS 331
S K+ + + ++++A+ D + LWD L HK++ C A++ G ++S
Sbjct: 218 SFVKF-SPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 276
Query: 332 GGVDS 336
G D+
Sbjct: 277 GSEDN 281
Score = 121 (47.7 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 43/130 (33%), Positives = 58/130 (44%)
Query: 23 HDDWVSAVDGSNPG-FILTGCYDNLGRVWK-AGGVCTH-ILEGHCGAVSSVNIIKSDGLK 79
H D VSAV + G I++ YD L R+W A G C +++ VS V S K
Sbjct: 170 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKF--SPNGK 227
Query: 80 YVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAE---TSGNMVCS 136
Y+ AT D TL+LW + K + K GHK + I A T G + S
Sbjct: 228 YILAATL--DNTLKLWDYS---------KGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 276
Query: 137 GSWDCTISLW 146
GS D + +W
Sbjct: 277 GSEDNLVYIW 286
Score = 112 (44.5 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 35/147 (23%), Positives = 65/147 (44%)
Query: 176 GEAISTLVGHTQCVSSVVWPQQET-IYSASWDHSVRTWDVEMGKDLSDIFC--GKALNCI 232
G+ + TL H+ VS+V + + + I S+S+D R WD G+ L + ++ +
Sbjct: 161 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 220
Query: 233 DIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISAS 292
G ++AA D L++WD K G + + + + ++S S
Sbjct: 221 KFSPNGKYILAAT-LDNTLKLWDYSK-GKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGS 278
Query: 293 YDGKVMLWDLRTAWPLSVIDSHKDKVL 319
D V +W+L+T + + H D V+
Sbjct: 279 EDNLVYIWNLQTKEIVQKLQGHTDVVI 305
Score = 96 (38.9 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 33/126 (26%), Positives = 56/126 (44%)
Query: 23 HDDWVSAVDGSNPG-FILTGCYDNLGRVWKA-GGVCTHILEGHCGAVSSVNIIKSDGLKY 80
H VS+V S G ++ + D L ++W A G + GH +S V L
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNL-- 101
Query: 81 VTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWD 140
+ +AS D+TL++W + + + K L+GH V N++ SGS+D
Sbjct: 102 --LVSASDDKTLKIWDVSSGKCL---------KTLKGHSNYVFCCNFNPQSNLIVSGSFD 150
Query: 141 CTISLW 146
++ +W
Sbjct: 151 ESVRIW 156
Score = 82 (33.9 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 26/88 (29%), Positives = 44/88 (50%)
Query: 60 LEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLW-KFDAEELVNHPKKIRSFKILRGH 118
L GH AVSSV S +++ A++S D+ +++W +D K K + GH
Sbjct: 41 LAGHTKAVSSVKF--SPNGEWL--ASSSADKLIKIWGAYDG--------KFE--KTISGH 86
Query: 119 KASVHSIAAETSGNMVCSGSWDCTISLW 146
K + +A + N++ S S D T+ +W
Sbjct: 87 KLGISDVAWSSDSNLLVSASDDKTLKIW 114
Score = 49 (22.3 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 177 EAISTLVGHTQCV-SSVVWPQQETIYSASW--DHSVRTW 212
E + L GHT V S+ P + I SA+ D +++ W
Sbjct: 292 EIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 178 (67.7 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 48/162 (29%), Positives = 77/162 (47%)
Query: 181 TLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIG-GEG 238
TL GHT+ VSSV + P E + S+S D ++ W GK G L D+
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-FEKTISGHKLGISDVAWSSD 98
Query: 239 SALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVM 298
S L+ + D L+IWD G + H++++ C ++ +S ++S S+D V
Sbjct: 99 SNLLVSASDDKTLKIWDVSS-GKCLKTLK--GHSNYVFCCNFNPQSNL-IVSGSFDESVR 154
Query: 299 LWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKLC 339
+WD++T L + +H D V + R G ++S D LC
Sbjct: 155 IWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LC 195
Score = 169 (64.5 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 64/245 (26%), Positives = 108/245 (44%)
Query: 115 LRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSD----AAGNQVSIKK---RKGNN 167
L GH +V S+ +G + S S D I +W D +G+++ I +N
Sbjct: 41 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN 100
Query: 168 QV----EEPQLE------GEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEM 216
+ ++ L+ G+ + TL GH+ V + PQ I S S+D SVR WDV+
Sbjct: 101 LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 160
Query: 217 GKDLSDIFC-GKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWI 275
GK L + ++ + +GS LI + D + RIWD G N +
Sbjct: 161 GKCLKTLPAHSDPVSAVHFNRDGS-LIVSSSYDGLCRIWDTAS-GQCLKTL-IDDDNPPV 217
Query: 276 SACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLC--ADW--WRGDSVIS 331
S K+ + + ++++A+ D + LWD L HK++ C A++ G ++S
Sbjct: 218 SFVKF-SPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 276
Query: 332 GGVDS 336
G D+
Sbjct: 277 GSEDN 281
Score = 121 (47.7 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 43/130 (33%), Positives = 58/130 (44%)
Query: 23 HDDWVSAVDGSNPG-FILTGCYDNLGRVWK-AGGVCTH-ILEGHCGAVSSVNIIKSDGLK 79
H D VSAV + G I++ YD L R+W A G C +++ VS V S K
Sbjct: 170 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKF--SPNGK 227
Query: 80 YVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAE---TSGNMVCS 136
Y+ AT D TL+LW + K + K GHK + I A T G + S
Sbjct: 228 YILAATL--DNTLKLWDYS---------KGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 276
Query: 137 GSWDCTISLW 146
GS D + +W
Sbjct: 277 GSEDNLVYIW 286
Score = 112 (44.5 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 35/147 (23%), Positives = 65/147 (44%)
Query: 176 GEAISTLVGHTQCVSSVVWPQQET-IYSASWDHSVRTWDVEMGKDLSDIFC--GKALNCI 232
G+ + TL H+ VS+V + + + I S+S+D R WD G+ L + ++ +
Sbjct: 161 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 220
Query: 233 DIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISAS 292
G ++AA D L++WD K G + + + + ++S S
Sbjct: 221 KFSPNGKYILAAT-LDNTLKLWDYSK-GKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGS 278
Query: 293 YDGKVMLWDLRTAWPLSVIDSHKDKVL 319
D V +W+L+T + + H D V+
Sbjct: 279 EDNLVYIWNLQTKEIVQKLQGHTDVVI 305
Score = 96 (38.9 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 33/126 (26%), Positives = 56/126 (44%)
Query: 23 HDDWVSAVDGSNPG-FILTGCYDNLGRVWKA-GGVCTHILEGHCGAVSSVNIIKSDGLKY 80
H VS+V S G ++ + D L ++W A G + GH +S V L
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNL-- 101
Query: 81 VTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWD 140
+ +AS D+TL++W + + + K L+GH V N++ SGS+D
Sbjct: 102 --LVSASDDKTLKIWDVSSGKCL---------KTLKGHSNYVFCCNFNPQSNLIVSGSFD 150
Query: 141 CTISLW 146
++ +W
Sbjct: 151 ESVRIW 156
Score = 82 (33.9 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 26/88 (29%), Positives = 44/88 (50%)
Query: 60 LEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLW-KFDAEELVNHPKKIRSFKILRGH 118
L GH AVSSV S +++ A++S D+ +++W +D K K + GH
Sbjct: 41 LAGHTKAVSSVKF--SPNGEWL--ASSSADKLIKIWGAYDG--------KFE--KTISGH 86
Query: 119 KASVHSIAAETSGNMVCSGSWDCTISLW 146
K + +A + N++ S S D T+ +W
Sbjct: 87 KLGISDVAWSSDSNLLVSASDDKTLKIW 114
Score = 49 (22.3 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 177 EAISTLVGHTQCV-SSVVWPQQETIYSASW--DHSVRTW 212
E + L GHT V S+ P + I SA+ D +++ W
Sbjct: 292 EIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 178 (67.7 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 48/162 (29%), Positives = 77/162 (47%)
Query: 181 TLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIG-GEG 238
TL GHT+ VSSV + P E + S+S D ++ W GK G L D+
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-FEKTISGHKLGISDVAWSSD 98
Query: 239 SALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVM 298
S L+ + D L+IWD G + H++++ C ++ +S ++S S+D V
Sbjct: 99 SNLLVSASDDKTLKIWDVSS-GKCLKTLK--GHSNYVFCCNFNPQSNL-IVSGSFDESVR 154
Query: 299 LWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKLC 339
+WD++T L + +H D V + R G ++S D LC
Sbjct: 155 IWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LC 195
Score = 169 (64.5 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 64/245 (26%), Positives = 108/245 (44%)
Query: 115 LRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSD----AAGNQVSIKK---RKGNN 167
L GH +V S+ +G + S S D I +W D +G+++ I +N
Sbjct: 41 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN 100
Query: 168 QV----EEPQLE------GEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEM 216
+ ++ L+ G+ + TL GH+ V + PQ I S S+D SVR WDV+
Sbjct: 101 LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 160
Query: 217 GKDLSDIFC-GKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWI 275
GK L + ++ + +GS LI + D + RIWD G N +
Sbjct: 161 GKCLKTLPAHSDPVSAVHFNRDGS-LIVSSSYDGLCRIWDTAS-GQCLKTL-IDDDNPPV 217
Query: 276 SACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLC--ADW--WRGDSVIS 331
S K+ + + ++++A+ D + LWD L HK++ C A++ G ++S
Sbjct: 218 SFVKF-SPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 276
Query: 332 GGVDS 336
G D+
Sbjct: 277 GSEDN 281
Score = 121 (47.7 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 43/130 (33%), Positives = 58/130 (44%)
Query: 23 HDDWVSAVDGSNPG-FILTGCYDNLGRVWK-AGGVCTH-ILEGHCGAVSSVNIIKSDGLK 79
H D VSAV + G I++ YD L R+W A G C +++ VS V S K
Sbjct: 170 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKF--SPNGK 227
Query: 80 YVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAE---TSGNMVCS 136
Y+ AT D TL+LW + K + K GHK + I A T G + S
Sbjct: 228 YILAATL--DNTLKLWDYS---------KGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 276
Query: 137 GSWDCTISLW 146
GS D + +W
Sbjct: 277 GSEDNLVYIW 286
Score = 112 (44.5 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 35/147 (23%), Positives = 65/147 (44%)
Query: 176 GEAISTLVGHTQCVSSVVWPQQET-IYSASWDHSVRTWDVEMGKDLSDIFC--GKALNCI 232
G+ + TL H+ VS+V + + + I S+S+D R WD G+ L + ++ +
Sbjct: 161 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 220
Query: 233 DIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISAS 292
G ++AA D L++WD K G + + + + ++S S
Sbjct: 221 KFSPNGKYILAAT-LDNTLKLWDYSK-GKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGS 278
Query: 293 YDGKVMLWDLRTAWPLSVIDSHKDKVL 319
D V +W+L+T + + H D V+
Sbjct: 279 EDNLVYIWNLQTKEIVQKLQGHTDVVI 305
Score = 96 (38.9 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 33/126 (26%), Positives = 56/126 (44%)
Query: 23 HDDWVSAVDGSNPG-FILTGCYDNLGRVWKA-GGVCTHILEGHCGAVSSVNIIKSDGLKY 80
H VS+V S G ++ + D L ++W A G + GH +S V L
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNL-- 101
Query: 81 VTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWD 140
+ +AS D+TL++W + + + K L+GH V N++ SGS+D
Sbjct: 102 --LVSASDDKTLKIWDVSSGKCL---------KTLKGHSNYVFCCNFNPQSNLIVSGSFD 150
Query: 141 CTISLW 146
++ +W
Sbjct: 151 ESVRIW 156
Score = 82 (33.9 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 26/88 (29%), Positives = 44/88 (50%)
Query: 60 LEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLW-KFDAEELVNHPKKIRSFKILRGH 118
L GH AVSSV S +++ A++S D+ +++W +D K K + GH
Sbjct: 41 LAGHTKAVSSVKF--SPNGEWL--ASSSADKLIKIWGAYDG--------KFE--KTISGH 86
Query: 119 KASVHSIAAETSGNMVCSGSWDCTISLW 146
K + +A + N++ S S D T+ +W
Sbjct: 87 KLGISDVAWSSDSNLLVSASDDKTLKIW 114
Score = 49 (22.3 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 177 EAISTLVGHTQCV-SSVVWPQQETIYSASW--DHSVRTW 212
E + L GHT V S+ P + I SA+ D +++ W
Sbjct: 292 EIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 178 (67.7 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 48/162 (29%), Positives = 77/162 (47%)
Query: 181 TLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIG-GEG 238
TL GHT+ VSSV + P E + S+S D ++ W GK G L D+
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-FEKTISGHKLGISDVAWSSD 98
Query: 239 SALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVM 298
S L+ + D L+IWD G + H++++ C ++ +S ++S S+D V
Sbjct: 99 SNLLVSASDDKTLKIWDVSS-GKCLKTLK--GHSNYVFCCNFNPQSNL-IVSGSFDESVR 154
Query: 299 LWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKLC 339
+WD++T L + +H D V + R G ++S D LC
Sbjct: 155 IWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LC 195
Score = 169 (64.5 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 64/245 (26%), Positives = 108/245 (44%)
Query: 115 LRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSD----AAGNQVSIKK---RKGNN 167
L GH +V S+ +G + S S D I +W D +G+++ I +N
Sbjct: 41 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN 100
Query: 168 QV----EEPQLE------GEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEM 216
+ ++ L+ G+ + TL GH+ V + PQ I S S+D SVR WDV+
Sbjct: 101 LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 160
Query: 217 GKDLSDIFC-GKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWI 275
GK L + ++ + +GS LI + D + RIWD G N +
Sbjct: 161 GKCLKTLPAHSDPVSAVHFNRDGS-LIVSSSYDGLCRIWDTAS-GQCLKTL-IDDDNPPV 217
Query: 276 SACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLC--ADW--WRGDSVIS 331
S K+ + + ++++A+ D + LWD L HK++ C A++ G ++S
Sbjct: 218 SFVKF-SPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 276
Query: 332 GGVDS 336
G D+
Sbjct: 277 GSEDN 281
Score = 121 (47.7 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 43/130 (33%), Positives = 58/130 (44%)
Query: 23 HDDWVSAVDGSNPG-FILTGCYDNLGRVWK-AGGVCTH-ILEGHCGAVSSVNIIKSDGLK 79
H D VSAV + G I++ YD L R+W A G C +++ VS V S K
Sbjct: 170 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKF--SPNGK 227
Query: 80 YVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAE---TSGNMVCS 136
Y+ AT D TL+LW + K + K GHK + I A T G + S
Sbjct: 228 YILAATL--DNTLKLWDYS---------KGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 276
Query: 137 GSWDCTISLW 146
GS D + +W
Sbjct: 277 GSEDNLVYIW 286
Score = 112 (44.5 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 35/147 (23%), Positives = 65/147 (44%)
Query: 176 GEAISTLVGHTQCVSSVVWPQQET-IYSASWDHSVRTWDVEMGKDLSDIFC--GKALNCI 232
G+ + TL H+ VS+V + + + I S+S+D R WD G+ L + ++ +
Sbjct: 161 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 220
Query: 233 DIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISAS 292
G ++AA D L++WD K G + + + + ++S S
Sbjct: 221 KFSPNGKYILAAT-LDNTLKLWDYSK-GKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGS 278
Query: 293 YDGKVMLWDLRTAWPLSVIDSHKDKVL 319
D V +W+L+T + + H D V+
Sbjct: 279 EDNLVYIWNLQTKEIVQKLQGHTDVVI 305
Score = 96 (38.9 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 33/126 (26%), Positives = 56/126 (44%)
Query: 23 HDDWVSAVDGSNPG-FILTGCYDNLGRVWKA-GGVCTHILEGHCGAVSSVNIIKSDGLKY 80
H VS+V S G ++ + D L ++W A G + GH +S V L
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNL-- 101
Query: 81 VTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWD 140
+ +AS D+TL++W + + + K L+GH V N++ SGS+D
Sbjct: 102 --LVSASDDKTLKIWDVSSGKCL---------KTLKGHSNYVFCCNFNPQSNLIVSGSFD 150
Query: 141 CTISLW 146
++ +W
Sbjct: 151 ESVRIW 156
Score = 82 (33.9 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 26/88 (29%), Positives = 44/88 (50%)
Query: 60 LEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLW-KFDAEELVNHPKKIRSFKILRGH 118
L GH AVSSV S +++ A++S D+ +++W +D K K + GH
Sbjct: 41 LAGHTKAVSSVKF--SPNGEWL--ASSSADKLIKIWGAYDG--------KFE--KTISGH 86
Query: 119 KASVHSIAAETSGNMVCSGSWDCTISLW 146
K + +A + N++ S S D T+ +W
Sbjct: 87 KLGISDVAWSSDSNLLVSASDDKTLKIW 114
Score = 49 (22.3 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 177 EAISTLVGHTQCV-SSVVWPQQETIYSASW--DHSVRTW 212
E + L GHT V S+ P + I SA+ D +++ W
Sbjct: 292 EIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
>RGD|1307285 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10116 "Rattus norvegicus" [GO:0007059 "chromosome
segregation" evidence=IEA] [GO:0016226 "iron-sulfur cluster
assembly" evidence=ISO;ISS] [GO:0071817 "MMXD complex"
evidence=ISO;ISS] [GO:0097361 "CIA complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1307285 GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226
GO:GO:0071817 HSSP:P16649 HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:BC088474 IPI:IPI00194647 RefSeq:NP_001008766.1
UniGene:Rn.108832 ProteinModelPortal:Q5M7T1 STRING:Q5M7T1
PRIDE:Q5M7T1 Ensembl:ENSRNOT00000017603 GeneID:29231 KEGG:rno:29231
UCSC:RGD:1307285 InParanoid:Q5M7T1 NextBio:608478
Genevestigator:Q5M7T1 Uniprot:Q5M7T1
Length = 339
Score = 133 (51.9 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 64/254 (25%), Positives = 111/254 (43%)
Query: 23 HDDWVSAVDGSNPGFILTGCY-DNLGRVWKAGGV----CTHILEGHCGAVSSVNIIKSDG 77
H++ V +V + G +L C D VW+ C +L H V V S
Sbjct: 104 HENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQE 163
Query: 78 LKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSG 137
L +A+AS D T++L++ + ++ V L GH+++V SIA + SG + S
Sbjct: 164 L----LASASYDDTVKLYQEEGDDWV-------CCATLEGHESTVWSIAFDPSGQRLASC 212
Query: 138 SWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVG-HTQCVSSVVWPQ 196
S D T+ +WR GN+ + G+ +P + + TL G HT+ + V W Q
Sbjct: 213 SDDRTVRIWRQY---LPGNEQGVAC-SGS----DPSWK--CVCTLSGFHTRTIYDVAWCQ 262
Query: 197 QE-TIYSASWDHSVRTWDVEMGKDLSD-IFCGKA---------LNCIDIGGEGSALIAAG 245
+ +A D ++R ++ + G D F A +NC+ + + L+A+
Sbjct: 263 LTGALATACGDDAIRVFEEDPGSDPQQPTFSLTAHLRQAHSQDVNCVAWNPKEAGLLASC 322
Query: 246 GSDPILRIWDPRKP 259
D + W+ +P
Sbjct: 323 SDDGEVAFWEYHQP 336
Score = 118 (46.6 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 43/126 (34%), Positives = 56/126 (44%)
Query: 168 QVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFC- 225
+V+E E E +S L HTQ V VVW P QE + SAS+D +V+ + E G D + C
Sbjct: 133 EVDEED-EYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYQEE-GDDW--VCCA 188
Query: 226 ---GKALNCIDIGGEGSAL-IAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWH 281
G I + S +A+ D +RIW PG V S SW C
Sbjct: 189 TLEGHESTVWSIAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCVC--- 245
Query: 282 NKSWFH 287
S FH
Sbjct: 246 TLSGFH 251
Score = 105 (42.0 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 38/125 (30%), Positives = 58/125 (46%)
Query: 34 NP-GFILTGCY-DNLGRVWKAGG---VCTHIL-EGHCGAVSSVNIIKSDGLKYVTVATAS 87
NP G +L C D R+W G +C +L EGH V V S Y+ A+AS
Sbjct: 25 NPTGTLLASCGGDRKIRIWGTEGDSWICKSVLSEGHQRTVRKV--AWSPCGNYL--ASAS 80
Query: 88 KDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWR 147
D T +WK + ++ L GH+ V S+A SGN++ + S D ++ +W
Sbjct: 81 FDATTCIWKKNQDDF-------ECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWE 133
Query: 148 TNDSD 152
++ D
Sbjct: 134 VDEED 138
Score = 69 (29.3 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 21/68 (30%), Positives = 32/68 (47%)
Query: 240 ALIAAGGSDPILRIW------DPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASY 293
AL A G D I R++ DP++P S +H+ ++ W+ K L S S
Sbjct: 266 ALATACGDDAI-RVFEEDPGSDPQQPTFSLTAHLRQAHSQDVNCVAWNPKEAGLLASCSD 324
Query: 294 DGKVMLWD 301
DG+V W+
Sbjct: 325 DGEVAFWE 332
>MGI|MGI:1346998 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10090 "Mus musculus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0007059 "chromosome segregation" evidence=IEA]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISO]
[GO:0071817 "MMXD complex" evidence=ISO] [GO:0097361 "CIA complex"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1346998 GO:GO:0007059 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0003700 GO:GO:0006357 GO:GO:0016226 GO:GO:0071817 HSSP:P16649
HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 ChiTaRS:CIAO1 EMBL:AK002314 EMBL:AK028376
EMBL:AL845368 EMBL:BC004089 IPI:IPI00320161 RefSeq:NP_079572.2
UniGene:Mm.45179 ProteinModelPortal:Q99KN2 SMR:Q99KN2 IntAct:Q99KN2
STRING:Q99KN2 PhosphoSite:Q99KN2 PaxDb:Q99KN2 PRIDE:Q99KN2
Ensembl:ENSMUST00000003759 GeneID:26371 KEGG:mmu:26371
UCSC:uc008mfb.2 InParanoid:Q99KN2 NextBio:304265 Bgee:Q99KN2
Genevestigator:Q99KN2 Uniprot:Q99KN2
Length = 339
Score = 132 (51.5 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 65/254 (25%), Positives = 110/254 (43%)
Query: 23 HDDWVSAVDGSNPGFILTGCY-DNLGRVWKAGGV----CTHILEGHCGAVSSVNIIKSDG 77
H++ V +V + G +L C D VW+ C +L H V V S
Sbjct: 104 HENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLSSHTQDVKHVVWHPSQE 163
Query: 78 LKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSG 137
L +A+AS D T++L++ + ++ V L GH+++V SIA + SG + S
Sbjct: 164 L----LASASYDDTVKLYQEEGDDWV-------CCATLEGHESTVWSIAFDPSGQRLASC 212
Query: 138 SWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVG-HTQCVSSVVWPQ 196
S D T+ +WR GN+ + G+ +P + I TL G HT+ + V W Q
Sbjct: 213 SDDRTVRIWRQY---LPGNEQGVAC-SGS----DPSWK--CICTLSGFHTRTIYDVAWCQ 262
Query: 197 QE-TIYSASWDHSVRTWDVEMGKDLSD-IFCGKA---------LNCIDIGGEGSALIAAG 245
+ +A D ++R ++ + G D F A +NC+ + L+A+
Sbjct: 263 LTGALATACGDDAIRVFEEDPGSDPQQPTFSLTAHLRQAHSQDVNCVAWNPKEPGLLASC 322
Query: 246 GSDPILRIWDPRKP 259
D + W+ +P
Sbjct: 323 SDDGEVAFWEYHQP 336
Score = 118 (46.6 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 43/126 (34%), Positives = 56/126 (44%)
Query: 168 QVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFC- 225
+V+E E E +S L HTQ V VVW P QE + SAS+D +V+ + E G D + C
Sbjct: 133 EVDEED-EYECVSVLSSHTQDVKHVVWHPSQELLASASYDDTVKLYQEE-GDDW--VCCA 188
Query: 226 ---GKALNCIDIGGEGSAL-IAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWH 281
G I + S +A+ D +RIW PG V S SW C
Sbjct: 189 TLEGHESTVWSIAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCIC--- 245
Query: 282 NKSWFH 287
S FH
Sbjct: 246 TLSGFH 251
Score = 105 (42.0 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 38/125 (30%), Positives = 58/125 (46%)
Query: 34 NP-GFILTGCY-DNLGRVWKAGG---VCTHIL-EGHCGAVSSVNIIKSDGLKYVTVATAS 87
NP G +L C D R+W G +C +L EGH V V S Y+ A+AS
Sbjct: 25 NPSGTLLASCGGDRKIRIWGTEGDSWICKSVLSEGHQRTVRKV--AWSPCGNYL--ASAS 80
Query: 88 KDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWR 147
D T +WK + ++ L GH+ V S+A SGN++ + S D ++ +W
Sbjct: 81 FDATTCIWKKNQDDF-------ECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWE 133
Query: 148 TNDSD 152
++ D
Sbjct: 134 VDEED 138
Score = 68 (29.0 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 21/68 (30%), Positives = 32/68 (47%)
Query: 240 ALIAAGGSDPILRIW------DPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASY 293
AL A G D I R++ DP++P S +H+ ++ W+ K L S S
Sbjct: 266 ALATACGDDAI-RVFEEDPGSDPQQPTFSLTAHLRQAHSQDVNCVAWNPKEPGLLASCSD 324
Query: 294 DGKVMLWD 301
DG+V W+
Sbjct: 325 DGEVAFWE 332
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 146 (56.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 40/155 (25%), Positives = 75/155 (48%)
Query: 181 TLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIG-GEG 238
TL GHT+ +SS + P + + ++S D +V+ W+++ G L DI
Sbjct: 82 TLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDH-MICERTLTGHKLGVNDIAWSSD 140
Query: 239 SALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVM 298
S + + D L+I++ TS HN+++ C ++ +S ++S S+D V
Sbjct: 141 SRCVVSASDDKTLKIFEIV---TSRMTKTLKGHNNYVFCCNFNPQSSL-VVSGSFDESVR 196
Query: 299 LWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGG 333
+WD++T + + +H D V + R S+I+ G
Sbjct: 197 IWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASG 231
Score = 134 (52.2 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 47/174 (27%), Positives = 83/174 (47%)
Query: 176 GEAISTLVGHTQCVSSVVWPQQET-IYSASWDHSVRTWDVEMGKDLSDIFCGK--ALNCI 232
G I TL H+ VS+V + + + I S S+D VR WD G+ + + + + +
Sbjct: 203 GMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFV 262
Query: 233 DIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKS-----WFH 287
G ++A+ D L++WD K T + Q++ H + C + N S W
Sbjct: 263 KFSPNGKYILASN-LDSTLKLWDFSKGKT---LKQYTGHEN-SKYCIFANFSVTGGKW-- 315
Query: 288 LISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGGV---DSKL 338
+IS S D K+ +W+L+T + ++ H VL +D ++I+ G D+K+
Sbjct: 316 IISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKI 369
Score = 131 (51.2 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 45/130 (34%), Positives = 59/130 (45%)
Query: 23 HDDWVSAVDGSNPG-FILTGCYDNLGRVWK-AGGVCTHIL-EGHCGAVSSVNIIKSDGLK 79
H D VSAV + G I +G YD L R+W A G C L + V+ V S K
Sbjct: 212 HSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKF--SPNGK 269
Query: 80 YVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAE---TSGNMVCS 136
Y+ + D TL+LW F K ++ K GH+ S + I A T G + S
Sbjct: 270 YILASNL--DSTLKLWDFS---------KGKTLKQYTGHENSKYCIFANFSVTGGKWIIS 318
Query: 137 GSWDCTISLW 146
GS DC I +W
Sbjct: 319 GSEDCKIYIW 328
Score = 88 (36.0 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 34/126 (26%), Positives = 56/126 (44%)
Query: 23 HDDWVSAVDGSNPG-FILTGCYDNLGRVWKAGG-VCTHILEGHCGAVSSVNIIKSDGLKY 80
H +S+ S G ++ T D ++W +C L GH V+ + SD
Sbjct: 86 HTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDI-AWSSDSR-- 142
Query: 81 VTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWD 140
V +AS D+TL+++ E+V R K L+GH V ++V SGS+D
Sbjct: 143 -CVVSASDDKTLKIF-----EIVTS----RMTKTLKGHNNYVFCCNFNPQSSLVVSGSFD 192
Query: 141 CTISLW 146
++ +W
Sbjct: 193 ESVRIW 198
Score = 49 (22.3 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 115 LRGHKASVHSIAAETSGNMVCSGSWDCTISLW 146
L GH S+ S G + + S D T+ +W
Sbjct: 83 LEGHTKSISSAKFSPCGKYLGTSSADKTVKIW 114
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 146 (56.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 40/155 (25%), Positives = 75/155 (48%)
Query: 181 TLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIG-GEG 238
TL GHT+ +SS + P + + ++S D +V+ W+++ G L DI
Sbjct: 82 TLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDH-MICERTLTGHKLGVNDIAWSSD 140
Query: 239 SALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVM 298
S + + D L+I++ TS HN+++ C ++ +S ++S S+D V
Sbjct: 141 SRCVVSASDDKTLKIFEIV---TSRMTKTLKGHNNYVFCCNFNPQSSL-VVSGSFDESVR 196
Query: 299 LWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGG 333
+WD++T + + +H D V + R S+I+ G
Sbjct: 197 IWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASG 231
Score = 134 (52.2 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 47/174 (27%), Positives = 83/174 (47%)
Query: 176 GEAISTLVGHTQCVSSVVWPQQET-IYSASWDHSVRTWDVEMGKDLSDIFCGK--ALNCI 232
G I TL H+ VS+V + + + I S S+D VR WD G+ + + + + +
Sbjct: 203 GMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFV 262
Query: 233 DIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKS-----WFH 287
G ++A+ D L++WD K T + Q++ H + C + N S W
Sbjct: 263 KFSPNGKYILASN-LDSTLKLWDFSKGKT---LKQYTGHEN-SKYCIFANFSVTGGKW-- 315
Query: 288 LISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGGV---DSKL 338
+IS S D K+ +W+L+T + ++ H VL +D ++I+ G D+K+
Sbjct: 316 IISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKI 369
Score = 131 (51.2 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 45/130 (34%), Positives = 59/130 (45%)
Query: 23 HDDWVSAVDGSNPG-FILTGCYDNLGRVWK-AGGVCTHIL-EGHCGAVSSVNIIKSDGLK 79
H D VSAV + G I +G YD L R+W A G C L + V+ V S K
Sbjct: 212 HSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKF--SPNGK 269
Query: 80 YVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAE---TSGNMVCS 136
Y+ + D TL+LW F K ++ K GH+ S + I A T G + S
Sbjct: 270 YILASNL--DSTLKLWDFS---------KGKTLKQYTGHENSKYCIFANFSVTGGKWIIS 318
Query: 137 GSWDCTISLW 146
GS DC I +W
Sbjct: 319 GSEDCKIYIW 328
Score = 88 (36.0 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 34/126 (26%), Positives = 56/126 (44%)
Query: 23 HDDWVSAVDGSNPG-FILTGCYDNLGRVWKAGG-VCTHILEGHCGAVSSVNIIKSDGLKY 80
H +S+ S G ++ T D ++W +C L GH V+ + SD
Sbjct: 86 HTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDI-AWSSDSR-- 142
Query: 81 VTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWD 140
V +AS D+TL+++ E+V R K L+GH V ++V SGS+D
Sbjct: 143 -CVVSASDDKTLKIF-----EIVTS----RMTKTLKGHNNYVFCCNFNPQSSLVVSGSFD 192
Query: 141 CTISLW 146
++ +W
Sbjct: 193 ESVRIW 198
Score = 49 (22.3 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 115 LRGHKASVHSIAAETSGNMVCSGSWDCTISLW 146
L GH S+ S G + + S D T+ +W
Sbjct: 83 LEGHTKSISSAKFSPCGKYLGTSSADKTVKIW 114
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 180 (68.4 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 79/301 (26%), Positives = 128/301 (42%)
Query: 61 EGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKA 120
+GH A++S + S K + ATAS D L LW L H R+++ + GHK
Sbjct: 15 KGHKAAITSADF--SPNCKQI--ATASWDTFLMLWS-----LKPHA---RAYRYV-GHKD 61
Query: 121 SVHSIAAETSGNMVCSGSWDCTISLW----RTNDSDAAGNQVSIKKR--KGNNQVEEPQL 174
V S+ GN++ S S D T+ LW + S+ + ++ + Q
Sbjct: 62 VVTSLQFSPQGNLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTAS 121
Query: 175 EGEAIS-----------TLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSD 222
E ++I +L HT V + P I S S D +++ WD K +
Sbjct: 122 EDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTT-SKQCVN 180
Query: 223 IFCGKA--LNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKW 280
F N +D G+ IA+ GSD +RIWD R + + + H+ ++ +
Sbjct: 181 NFSDSVGFANFVDFSPNGTC-IASAGSDHAVRIWDIRM---NRLLQHYQVHSCGVNCLSF 236
Query: 281 HNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKLC 339
H S L++AS DG V + DL + + H V + + G+ SGG D+++
Sbjct: 237 H-PSGNSLVTASSDGTVKILDLVEGRLIYTLQGHTGPVFTVSFSKDGELFTSGGADAQVL 295
Query: 340 V 340
V
Sbjct: 296 V 296
Score = 93 (37.8 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 32/115 (27%), Positives = 53/115 (46%)
Query: 195 PQQETIYSASWDHSVRTWDVEMGKDLSDI---FCGKALNCIDIGGEGSALIAAGGSDPIL 251
P I SA DH+VR WD+ M + L CG +NC+ G++L+ A SD +
Sbjct: 196 PNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCG--VNCLSFHPSGNSLVTAS-SDGTV 252
Query: 252 RIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAW 306
+I D + G ++ H + + +K S D +V++W RT++
Sbjct: 253 KILDLVE-GRL--IYTLQGHTGPVFTVSF-SKDGELFTSGGADAQVLVW--RTSF 301
Score = 86 (35.3 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 34/126 (26%), Positives = 53/126 (42%)
Query: 23 HDDWVSAVDGS-NPGFILTGCYDNLGRVWKAGGVC-THILEGHCGAVSSVNIIKSDGLKY 80
H +++ D S N I T +D +W + GH V+S+ L
Sbjct: 17 HKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQGNL-- 74
Query: 81 VTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWD 140
+A+AS+D+T+RLW D + K FK H A V S+ G + + S D
Sbjct: 75 --LASASRDKTVRLWVLDRKG------KSSEFK---AHTAPVRSVDFSADGQFLVTASED 123
Query: 141 CTISLW 146
+I +W
Sbjct: 124 KSIKVW 129
>TAIR|locus:2005539 [details] [associations]
symbol:PRL1 "AT4G15900" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009870 "defense
response signaling pathway, resistance gene-dependent"
evidence=IMP] [GO:0010204 "defense response signaling pathway,
resistance gene-independent" evidence=IMP] [GO:0042742 "defense
response to bacterium" evidence=IMP] [GO:0050832 "defense response
to fungus" evidence=IMP] [GO:0006508 "proteolysis" evidence=IMP]
[GO:0009755 "hormone-mediated signaling pathway" evidence=RCA;IMP]
[GO:0010154 "fruit development" evidence=IMP] [GO:0010182 "sugar
mediated signaling pathway" evidence=RCA;IMP] [GO:0048364 "root
development" evidence=IMP] [GO:0048366 "leaf development"
evidence=RCA;IMP] [GO:0048825 "cotyledon development"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IPI] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0050826 "response to freezing" evidence=RCA] [GO:0051301 "cell
division" evidence=RCA] [GO:0009749 "response to glucose stimulus"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005634 GO:GO:0045892
EMBL:CP002687 GenomeReviews:CT486007_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0050832
GO:GO:0009749 GO:GO:0042742 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006508 GO:GO:0045087 GO:GO:0048364
GO:GO:0010182 GO:GO:0016567 GO:GO:0009870 GO:GO:0009755
GO:GO:0048366 GO:GO:0048825 EMBL:Z97339 GO:GO:0010204 GO:GO:0080008
EMBL:AL161542 HOGENOM:HOG000207595 KO:K12862 OMA:ITAEADK
EMBL:X82824 EMBL:X82825 IPI:IPI00524936 PIR:S49820
RefSeq:NP_193325.1 UniGene:At.103 ProteinModelPortal:Q42384
SMR:Q42384 IntAct:Q42384 STRING:Q42384 PaxDb:Q42384 PRIDE:Q42384
EnsemblPlants:AT4G15900.1 GeneID:827272 KEGG:ath:AT4G15900
GeneFarm:2847 TAIR:At4g15900 InParanoid:Q42384 PhylomeDB:Q42384
ProtClustDB:CLSN2685622 Genevestigator:Q42384 GermOnline:AT4G15900
Uniprot:Q42384
Length = 486
Score = 143 (55.4 bits), Expect = 5.0e-11, Sum P(2) = 5.0e-11
Identities = 38/141 (26%), Positives = 67/141 (47%)
Query: 181 TLVGHTQCVSSVVWPQQET-IYSASWDHSVRTWDVEMGKDLSDIFCG--KALNCIDIGGE 237
TL GH + V + + T ++SA D V+ WD+E K + + G + C+ +
Sbjct: 213 TLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRS-YHGHLSGVYCLALHPT 271
Query: 238 GSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKV 297
L+ GG D + R+WD R T +F S H++ + + + + +++ S+D +
Sbjct: 272 LDVLLT-GGRDSVCRVWDIR---TKMQIFALSGHDNTVCSV-FTRPTDPQVVTGSHDTTI 326
Query: 298 MLWDLRTAWPLSVIDSHKDKV 318
WDLR +S + HK V
Sbjct: 327 KFWDLRYGKTMSTLTHHKKSV 347
Score = 81 (33.6 bits), Expect = 5.0e-11, Sum P(2) = 5.0e-11
Identities = 13/37 (35%), Positives = 24/37 (64%)
Query: 110 RSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLW 146
+++++++GH V S+A + S C+GS D TI +W
Sbjct: 167 KNYRVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIW 203
>POMBASE|SPAC57A10.05c [details] [associations]
symbol:pof1 "F-box/WD repeat protein protein Pof1"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IPI] [GO:0071276 "cellular
response to cadmium ion" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 PomBase:SPAC57A10.05c
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071276 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0042787
HOGENOM:HOG000166480 KO:K10259 OrthoDB:EOG496313 EMBL:AB032410
PIR:T38932 RefSeq:NP_593310.1 ProteinModelPortal:P87053
IntAct:P87053 STRING:P87053 EnsemblFungi:SPAC57A10.05c.1
GeneID:2542914 KEGG:spo:SPAC57A10.05c NextBio:20803951
Uniprot:P87053
Length = 605
Score = 181 (68.8 bits), Expect = 5.3e-11, P = 5.3e-11
Identities = 80/340 (23%), Positives = 144/340 (42%)
Query: 23 HDDWVSAVDGSNPGFILTGCYDNLGRVWK-AGGVCTHILEGHCGAVSSVNIIKSDGLKYV 81
H D V + + +G YD R+W A +LEGH S V ++ D K +
Sbjct: 272 HSDGVMCLQLVR-NILASGSYDATIRLWNLATFQQVALLEGHS---SGVTCLQFDQCKLI 327
Query: 82 TVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDC 141
+ S D+T+R+W + E ++ IL GH SV + +++ ++ SGS DC
Sbjct: 328 S---GSMDKTIRIWNYRTSECIS---------ILHGHTDSVLCLTFDST--LLVSGSADC 373
Query: 142 TISLWRTNDSDA------AG--NQVSIKKRKG-------NNQVEEPQLE-GEAISTLVGH 185
T+ LW + G N V I + +G ++ ++ LE + T H
Sbjct: 374 TVKLWHFSGGKRITLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFSAH 433
Query: 186 TQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAG 245
V S+ ++S S D +++ WD+E K + +F G +I + LI+ G
Sbjct: 434 IGPVQSLALADSR-LFSCSLDGTIKQWDIEKKKCVHTLF-GHIEGVWEIAADHLRLIS-G 490
Query: 246 GSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTA 305
D ++++W+ V +H+ +++ + ++S S DGK+ LW A
Sbjct: 491 AHDGVVKVWE-----ACECVHTLKNHSEPVTSVALGD---CEVVSGSEDGKIYLWLFNNA 542
Query: 306 WPLSVIDSHKDKVLCADWWRGDSVISGGVDSKLCVSSGVS 345
S + + + + R +S + + S SS +S
Sbjct: 543 PNESPVSTQSVPISSLNGQRSNSSVQRALSSVPNYSSSLS 582
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 178 (67.7 bits), Expect = 5.4e-11, P = 5.4e-11
Identities = 76/303 (25%), Positives = 122/303 (40%)
Query: 48 RVWK-AGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHP 106
R+W G L+GH +V V L +A+ S D +++LW F
Sbjct: 133 RIWDFETGEYERSLKGHTDSVQDVAFDAQGKL----LASCSADLSIKLWDFQ-------- 180
Query: 107 KKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGN 166
+ K + GH +V S+A +G+ V S S D TI +W A G +K G+
Sbjct: 181 QSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEV----ATG--YCVKTYTGH 234
Query: 167 NQ---VEEPQLEGEAISTLVGHTQCVSSVVWPQQET---IYSASWDHSVR--TWDVEMGK 218
+ + +EG +T + Q + VW + +H+V W E
Sbjct: 235 REWVRMVRVHIEGSIFATC-SNDQTIR--VWLTNSKDCKVELRDHEHTVECIAWAPEAAA 291
Query: 219 DLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISAC 278
+ G A N G +A+G D +RIWD + S H++W+
Sbjct: 292 SAINEAAG-ADN--KKGHHQGPFLASGSRDKTIRIWDV---SVGLCLLTLSGHDNWVRGL 345
Query: 279 KWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDS-VISGGVDSK 337
+H + L+SAS D + +WDLR + + +H+ D+ + VISG VD
Sbjct: 346 AFHPGGKY-LVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQT 404
Query: 338 LCV 340
+ V
Sbjct: 405 VKV 407
Score = 126 (49.4 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 46/193 (23%), Positives = 82/193 (42%)
Query: 113 KILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEP 172
K GH+ V + G++ + S D TI +W TN D ++ R + VE
Sbjct: 229 KTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDC-----KVELRDHEHTVECI 283
Query: 173 QLEGEAISTLVGHTQCVSSVVWPQQET-IYSASWDHSVRTWDVEMGKDLSDIFC-GKALN 230
EA ++ + + Q + S S D ++R WDV +G L + +
Sbjct: 284 AWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVR 343
Query: 231 CIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLIS 290
+ G L++A D +R+WD R ++ +H + ++ +H K+ ++IS
Sbjct: 344 GLAFHPGGKYLVSAS-DDKTIRVWDLRNKRCMKTLY---AHQHFCTSIDFH-KAHPYVIS 398
Query: 291 ASYDGKVMLWDLR 303
S D V +W+ R
Sbjct: 399 GSVDQTVKVWECR 411
>CGD|CAL0000293 [details] [associations]
symbol:UTP13 species:5476 "Candida albicans" [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IEA]
[GO:0030515 "snoRNA binding" evidence=IEA] [GO:0000472
"endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA
from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480 "endonucleolytic
cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR013934 InterPro:IPR015943
Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000293 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 EMBL:AACQ01000021 EMBL:AACQ01000022 KO:K14555
RefSeq:XP_720576.1 RefSeq:XP_720704.1 ProteinModelPortal:Q5AGB1
STRING:Q5AGB1 GeneID:3637636 GeneID:3637718 KEGG:cal:CaO19.11744
KEGG:cal:CaO19.4268 Uniprot:Q5AGB1
Length = 799
Score = 135 (52.6 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 40/141 (28%), Positives = 64/141 (45%)
Query: 23 HDDWVSAVDGSNPG-FILTGCYDNLGRVWKAGGVCTHI-----LEGHCGAVSSVNIIKSD 76
H D ++AVD S G +I T DN R+W+ G +GH GA++++++ KS
Sbjct: 380 HTDILNAVDVSTDGKWIATASKDNEARLWRWNGELQDFEPFARFQGHAGAITAISLSKSQ 439
Query: 77 GLKYVTVATASKDQTLRLWKFDAEELVNHPKKI--RSFKILRGHKASVHSIAAETSGNMV 134
V T S D T++ WK + N P I S R H ++SI +
Sbjct: 440 NEPKFLV-TGSTDLTIKKWK-----IPNTPNSIVKTSEYTRRAHDKDINSIDVSPNDEYF 493
Query: 135 CSGSWDCTISLWRTNDSDAAG 155
+ S+D +W+T+ + G
Sbjct: 494 ATASYDKLGKVWQTDSGETIG 514
Score = 122 (48.0 bits), Expect = 7.5e-11, Sum P(2) = 7.5e-11
Identities = 35/157 (22%), Positives = 65/157 (41%)
Query: 185 HTQCVSSV-VWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGG-EGSALI 242
H + ++S+ V P E +AS+D + W + G+ + + G DI + LI
Sbjct: 477 HDKDINSIDVSPNDEYFATASYDKLGKVWQTDSGETIG-VLKGHKRGLWDINFYKFDKLI 535
Query: 243 AAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDL 302
G D +++W + H + + K+ N+ L+S DG + LWD
Sbjct: 536 VTGSGDKTIKVWSLLDFSCKKTL---EGHTNSVQRVKFFNREHPQLLSCGADGLIKLWDY 592
Query: 303 RTAWPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKL 338
+ + +D+H ++ D G+ + D KL
Sbjct: 593 KQGEIIKSLDNHDQRIWAMDLKNDGEYFTTADADGKL 629
Score = 108 (43.1 bits), Expect = 7.5e-11, Sum P(2) = 7.5e-11
Identities = 30/92 (32%), Positives = 50/92 (54%)
Query: 59 ILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGH 118
+ EGH +++V++ +DG K++ ATASKD RLW+++ E P F +GH
Sbjct: 376 VYEGHTDILNAVDV-STDG-KWI--ATASKDNEARLWRWNGELQDFEP-----FARFQGH 426
Query: 119 KASVHSIAAETSGN---MVCSGSWDCTISLWR 147
++ +I+ S N + +GS D TI W+
Sbjct: 427 AGAITAISLSKSQNEPKFLVTGSTDLTIKKWK 458
Score = 92 (37.4 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 30/126 (23%), Positives = 56/126 (44%)
Query: 26 WVSAVDGSNPGFILTGCYDNLGRVWKA-GGVCTHILEGHCGAVSSVNIIKSDGLKYVTVA 84
++S+VD ++ F G D + VW G TH L+GH + S+ + +A
Sbjct: 105 YISSVDSTSSLFAFGGS-DGVITVWDIENGYVTHSLKGHGTTICSLTFHGELNSQDWRLA 163
Query: 85 TASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTIS 144
+ T+++W +LV K R L+ H +V + + G++ SG D +
Sbjct: 164 SGDTMGTVKIW-----DLV----KRRCIHTLKDHNTAVRGVGFDQDGDLFISGGRDNVVI 214
Query: 145 LWRTND 150
++ T +
Sbjct: 215 IYNTKN 220
Score = 66 (28.3 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 21/90 (23%), Positives = 43/90 (47%)
Query: 60 LEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHK 119
+ G+ G ++ + + G ++ +A A+ LR+ D E+ P ++R ++ GH
Sbjct: 334 IAGNQGIIADIKYV---GPEFNLLAMATNSPALRI--VDIEK----PLELRVYE---GHT 381
Query: 120 ASVHSIAAETSGNMVCSGSWDCTISLWRTN 149
++++ T G + + S D LWR N
Sbjct: 382 DILNAVDVSTDGKWIATASKDNEARLWRWN 411
>UNIPROTKB|Q5AGB1 [details] [associations]
symbol:CaO19.11744 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0032040 "small-subunit
processome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0000293
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364 GO:GO:0032040
EMBL:AACQ01000021 EMBL:AACQ01000022 KO:K14555 RefSeq:XP_720576.1
RefSeq:XP_720704.1 ProteinModelPortal:Q5AGB1 STRING:Q5AGB1
GeneID:3637636 GeneID:3637718 KEGG:cal:CaO19.11744
KEGG:cal:CaO19.4268 Uniprot:Q5AGB1
Length = 799
Score = 135 (52.6 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 40/141 (28%), Positives = 64/141 (45%)
Query: 23 HDDWVSAVDGSNPG-FILTGCYDNLGRVWKAGGVCTHI-----LEGHCGAVSSVNIIKSD 76
H D ++AVD S G +I T DN R+W+ G +GH GA++++++ KS
Sbjct: 380 HTDILNAVDVSTDGKWIATASKDNEARLWRWNGELQDFEPFARFQGHAGAITAISLSKSQ 439
Query: 77 GLKYVTVATASKDQTLRLWKFDAEELVNHPKKI--RSFKILRGHKASVHSIAAETSGNMV 134
V T S D T++ WK + N P I S R H ++SI +
Sbjct: 440 NEPKFLV-TGSTDLTIKKWK-----IPNTPNSIVKTSEYTRRAHDKDINSIDVSPNDEYF 493
Query: 135 CSGSWDCTISLWRTNDSDAAG 155
+ S+D +W+T+ + G
Sbjct: 494 ATASYDKLGKVWQTDSGETIG 514
Score = 122 (48.0 bits), Expect = 7.5e-11, Sum P(2) = 7.5e-11
Identities = 35/157 (22%), Positives = 65/157 (41%)
Query: 185 HTQCVSSV-VWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGG-EGSALI 242
H + ++S+ V P E +AS+D + W + G+ + + G DI + LI
Sbjct: 477 HDKDINSIDVSPNDEYFATASYDKLGKVWQTDSGETIG-VLKGHKRGLWDINFYKFDKLI 535
Query: 243 AAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDL 302
G D +++W + H + + K+ N+ L+S DG + LWD
Sbjct: 536 VTGSGDKTIKVWSLLDFSCKKTL---EGHTNSVQRVKFFNREHPQLLSCGADGLIKLWDY 592
Query: 303 RTAWPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKL 338
+ + +D+H ++ D G+ + D KL
Sbjct: 593 KQGEIIKSLDNHDQRIWAMDLKNDGEYFTTADADGKL 629
Score = 108 (43.1 bits), Expect = 7.5e-11, Sum P(2) = 7.5e-11
Identities = 30/92 (32%), Positives = 50/92 (54%)
Query: 59 ILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGH 118
+ EGH +++V++ +DG K++ ATASKD RLW+++ E P F +GH
Sbjct: 376 VYEGHTDILNAVDV-STDG-KWI--ATASKDNEARLWRWNGELQDFEP-----FARFQGH 426
Query: 119 KASVHSIAAETSGN---MVCSGSWDCTISLWR 147
++ +I+ S N + +GS D TI W+
Sbjct: 427 AGAITAISLSKSQNEPKFLVTGSTDLTIKKWK 458
Score = 92 (37.4 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 30/126 (23%), Positives = 56/126 (44%)
Query: 26 WVSAVDGSNPGFILTGCYDNLGRVWKA-GGVCTHILEGHCGAVSSVNIIKSDGLKYVTVA 84
++S+VD ++ F G D + VW G TH L+GH + S+ + +A
Sbjct: 105 YISSVDSTSSLFAFGGS-DGVITVWDIENGYVTHSLKGHGTTICSLTFHGELNSQDWRLA 163
Query: 85 TASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTIS 144
+ T+++W +LV K R L+ H +V + + G++ SG D +
Sbjct: 164 SGDTMGTVKIW-----DLV----KRRCIHTLKDHNTAVRGVGFDQDGDLFISGGRDNVVI 214
Query: 145 LWRTND 150
++ T +
Sbjct: 215 IYNTKN 220
Score = 66 (28.3 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 21/90 (23%), Positives = 43/90 (47%)
Query: 60 LEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHK 119
+ G+ G ++ + + G ++ +A A+ LR+ D E+ P ++R ++ GH
Sbjct: 334 IAGNQGIIADIKYV---GPEFNLLAMATNSPALRI--VDIEK----PLELRVYE---GHT 381
Query: 120 ASVHSIAAETSGNMVCSGSWDCTISLWRTN 149
++++ T G + + S D LWR N
Sbjct: 382 DILNAVDVSTDGKWIATASKDNEARLWRWN 411
>TAIR|locus:2194060 [details] [associations]
symbol:ATARCA "AT1G18080" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP;RCA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006417
"regulation of translation" evidence=IGI] [GO:0009845 "seed
germination" evidence=IGI] [GO:0042254 "ribosome biogenesis"
evidence=IGI] [GO:0071215 "cellular response to abscisic acid
stimulus" evidence=IEP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006096
"glycolysis" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] [GO:0009651 "response to salt
stress" evidence=RCA] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] [GO:0010476 "gibberellin mediated signaling
pathway" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009507 GO:GO:0046686 GO:GO:0006417 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042254 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0022626 EMBL:AC034107
EMBL:AC069551 EMBL:U77381 EMBL:AY035007 EMBL:AY063016 EMBL:AK318781
EMBL:AY088480 IPI:IPI00524816 IPI:IPI00930983 RefSeq:NP_173248.1
UniGene:At.22612 UniGene:At.67882 PDB:3DM0 PDBsum:3DM0
ProteinModelPortal:O24456 SMR:O24456 IntAct:O24456 STRING:O24456
PaxDb:O24456 PRIDE:O24456 EnsemblPlants:AT1G18080.1 GeneID:838388
KEGG:ath:AT1G18080 GeneFarm:2809 TAIR:At1g18080
HOGENOM:HOG000091643 InParanoid:O24456 KO:K14753 OMA:IRVWQVM
PhylomeDB:O24456 ProtClustDB:CLSN2682135 EvolutionaryTrace:O24456
Genevestigator:O24456 GermOnline:AT1G18080 GO:GO:0010476
Uniprot:O24456
Length = 327
Score = 124 (48.7 bits), Expect = 8.4e-11, Sum P(2) = 8.4e-11
Identities = 42/127 (33%), Positives = 66/127 (51%)
Query: 184 GHTQCVSSVVW-PQ--QETIYSASWDHSVRTWDVEMGKDLSDIFCGKA--LNCIDIGGEG 238
GH VS V + P Q TI SASWD +V+ W++ K L G ++ + + +G
Sbjct: 148 GHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCK-LRSTLAGHTGYVSTVAVSPDG 206
Query: 239 SALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISA-CKWHNKSWFHLISASYDGKV 297
S L A+GG D ++ +WD + G ++ + NS I A C N+ W L +A+ G +
Sbjct: 207 S-LCASGGKDGVVLLWDLAE-GKK--LYSLEA-NSVIHALCFSPNRYW--LCAATEHG-I 258
Query: 298 MLWDLRT 304
+WDL +
Sbjct: 259 KIWDLES 265
Score = 116 (45.9 bits), Expect = 0.00036, P = 0.00036
Identities = 41/171 (23%), Positives = 65/171 (38%)
Query: 176 GEAISTLVGHTQCVSSVVWPQQ-ETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDI 234
G A L GH+ V VV + S SWD +R WD+ G F G + + +
Sbjct: 53 GVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRR-FVGHTKDVLSV 111
Query: 235 GGE-GSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWH-NKSWFHLISAS 292
+ I + D +++W+ H W+S ++ N ++SAS
Sbjct: 112 AFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSAS 171
Query: 293 YDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGGVDSKLCVSSG 343
+D V +W+L S + H V S ++ D LC S G
Sbjct: 172 WDKTVKVWNLSNCKLRSTLAGHTGYV---------STVAVSPDGSLCASGG 213
Score = 94 (38.1 bits), Expect = 8.4e-11, Sum P(2) = 8.4e-11
Identities = 42/134 (31%), Positives = 54/134 (40%)
Query: 23 HDDWVSAVDG--SNPGFILTGCYDNLGRVWK------AGGVCTHILEGHCGAVSSVNIIK 74
H D V+A+ N I++ D +WK A GV L GH V V ++
Sbjct: 14 HTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDV-VLS 72
Query: 75 SDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMV 134
SDG ++ + S D LRLW A R F GH V S+A +
Sbjct: 73 SDG-QFAL--SGSWDGELRLWDLAAGV------STRRFV---GHTKDVLSVAFSLDNRQI 120
Query: 135 CSGSWDCTISLWRT 148
S S D TI LW T
Sbjct: 121 VSASRDRTIKLWNT 134
Score = 60 (26.2 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 22/73 (30%), Positives = 37/73 (50%)
Query: 115 LRGHKASVHSIAAET-SGNMVCSGSWDCTISLWR-TNDSDAAGNQVSIKKRKGNNQ-VEE 171
+R H V +IA + +++ S S D +I LW+ T D A G V+ ++ G++ VE+
Sbjct: 11 MRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYG--VAQRRLTGHSHFVED 68
Query: 172 PQLEGEAISTLVG 184
L + L G
Sbjct: 69 VVLSSDGQFALSG 81
>DICTYBASE|DDB_G0279507 [details] [associations]
symbol:plrg1 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0279507 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005681 EMBL:AAFI02000031 GO:GO:0000398
KO:K12862 OMA:ITAEADK RefSeq:XP_641668.1 ProteinModelPortal:Q54WP9
STRING:Q54WP9 EnsemblProtists:DDB0233530 GeneID:8622076
KEGG:ddi:DDB_G0279507 InParanoid:Q54WP9 Uniprot:Q54WP9
Length = 516
Score = 154 (59.3 bits), Expect = 9.2e-11, Sum P(2) = 9.2e-11
Identities = 42/145 (28%), Positives = 66/145 (45%)
Query: 176 GEAISTLVGHTQCVSSV-VWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDI 234
GE TL GH + + V + ++S D+ V WD+E K + + + G +
Sbjct: 239 GELKVTLTGHVSAIRGLEVSSRHPYLFSVGEDNKVLCWDLESNKQVRNYY-GHRQGVYSV 297
Query: 235 GGEGSA-LIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASY 293
+ ++ +GG D +R+WD R T A +F+ H I + K N +IS S
Sbjct: 298 ALHPTLDVLFSGGRDNCVRVWDMR---TRANIFEMKGHKGTILSLKSQNADP-QVISGSM 353
Query: 294 DGKVMLWDLRTAWPLSVIDSHKDKV 318
D V LWDL T + + +HK V
Sbjct: 354 DTTVKLWDLATGTSAATLTNHKKGV 378
Score = 125 (49.1 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 44/168 (26%), Positives = 77/168 (45%)
Query: 23 HDDWVSA--VDGSNPGFILTGCYDNLGRVWK-AGGVCTHILEGHCGAVSSVNIIKSDGLK 79
H WV A VD SN F TG DN +VW A G L GH A+ + + +
Sbjct: 206 HTGWVRAIAVDKSNEWFA-TGSTDNTIKVWDLASGELKVTLTGHVSAIRGLEVSS----R 260
Query: 80 YVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSW 139
+ + + +D + W ++ K++R++ GH+ V+S+A + +++ SG
Sbjct: 261 HPYLFSVGEDNKVLCWDLESN------KQVRNYY---GHRQGVYSVALHPTLDVLFSGGR 311
Query: 140 DCTISLW----RTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLV 183
D + +W R N + G++ +I K N +PQ+ ++ T V
Sbjct: 312 DNCVRVWDMRTRANIFEMKGHKGTILSLKSQNA--DPQVISGSMDTTV 357
Score = 117 (46.2 bits), Expect = 0.00059, P = 0.00059
Identities = 44/199 (22%), Positives = 85/199 (42%)
Query: 143 ISLWRTNDSDAAGNQVSIKKRKGNNQVE-EPQLEGEAISTLVGHTQCVSSV-VWPQQETI 200
I+++ ++D N+ I + + + E + + + GHT V ++ V E
Sbjct: 163 ITIYNKTNTDDINNRTLINQYEPLTYTKPEWHPPWKLMRVISGHTGWVRAIAVDKSNEWF 222
Query: 201 YSASWDHSVRTWDVEMGKDLSDIFCG--KALNCIDIGGEGSALIAAGGSDPILRIWDPRK 258
+ S D++++ WD+ G +L G A+ +++ L + G + +L WD
Sbjct: 223 ATGSTDNTIKVWDLASG-ELKVTLTGHVSAIRGLEVSSRHPYLFSVGEDNKVL-CWDLE- 279
Query: 259 PGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKV 318
++ V + H + + H + L S D V +WD+RT + + HK +
Sbjct: 280 --SNKQVRNYYGHRQGVYSVALH-PTLDVLFSGGRDNCVRVWDMRTRANIFEMKGHKGTI 336
Query: 319 LCADWWRGD-SVISGGVDS 336
L D VISG +D+
Sbjct: 337 LSLKSQNADPQVISGSMDT 355
Score = 67 (28.6 bits), Expect = 9.2e-11, Sum P(2) = 9.2e-11
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 105 HPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLW 146
HP + +++ GH V +IA + S +GS D TI +W
Sbjct: 194 HPPW-KLMRVISGHTGWVRAIAVDKSNEWFATGSTDNTIKVW 234
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 145 (56.1 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 66/281 (23%), Positives = 116/281 (41%)
Query: 60 LEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHK 119
LEGH A+S V +DG +A+AS D+T+ LW L++ GH
Sbjct: 39 LEGHTAAISCVKF-SNDGN---LLASASVDKTMILWSATNYSLIHR---------YEGHS 85
Query: 120 ASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAA-----G--NQV-SIKKRKGNNQVEE 171
+ + +A + + CS S DCT+ +W G N V + +N +
Sbjct: 86 SGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVS 145
Query: 172 PQLE----------GEAISTLVGHTQCVSSVVWPQQET-IYSASWDHSVRTWDVEMGKDL 220
+ G+ + + H+ +SSV + + + I SAS D S + WD + G L
Sbjct: 146 GSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCL 205
Query: 221 SDIFCGK--ALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISAC 278
+ K A++ G ++ A D L++ + G V+ ++ +
Sbjct: 206 KTLIDDKSPAVSFAKFSPNGKFILVAT-LDSTLKLSN-YATGKFLKVYTGHTNKVFCITS 263
Query: 279 KWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVL 319
+ + +++S S D V LWDL+ L ++ H D V+
Sbjct: 264 AFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVI 304
Score = 138 (53.6 bits), Expect = 9.2e-11, Sum P(2) = 9.2e-11
Identities = 48/170 (28%), Positives = 75/170 (44%)
Query: 177 EAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFC-GKALNCIDI 234
E + L GHT V V + P I S S+D ++R W+V+ GK + I ++ +
Sbjct: 119 ECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHF 178
Query: 235 GGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYD 294
+GS +++A D +IWD K GT + +S K+ F L+ A+ D
Sbjct: 179 NRDGSLIVSAS-HDGSCKIWDA-KEGTCLKTL-IDDKSPAVSFAKFSPNGKFILV-ATLD 234
Query: 295 GKVMLWDLRTAWPLSVIDSHKDKVLCA----DWWRGDSVISGGVDSKLCV 340
+ L + T L V H +KV C G ++SG D+ CV
Sbjct: 235 STLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDN--CV 282
Score = 126 (49.4 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 44/191 (23%), Positives = 79/191 (41%)
Query: 148 TNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQETIY-SASWD 206
T++ A N GN + +P + TL GHT +S V + + SAS D
Sbjct: 8 TSNGVANANSTGNAGTSGNVPIYKPYRH---LKTLEGHTAAISCVKFSNDGNLLASASVD 64
Query: 207 HSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPI-LRIWDPRKPGTSAPV 265
++ W L + G + D+ + SD LRIWD R P V
Sbjct: 65 KTMILWSAT-NYSLIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKV 123
Query: 266 FQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR 325
+ H +++ ++ S ++S S+D + +W+++T + +I +H + + R
Sbjct: 124 LR--GHTNFVFCVNFNPPSNL-IVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNR 180
Query: 326 -GDSVISGGVD 335
G ++S D
Sbjct: 181 DGSLIVSASHD 191
Score = 120 (47.3 bits), Expect = 0.00013, P = 0.00013
Identities = 42/126 (33%), Positives = 57/126 (45%)
Query: 23 HDDWVSAVDGSNPGFILTGC-YDNLGRVWKAGGVCT-HILEGHCGAVSSVNIIKSDGLKY 80
H +S V SN G +L D +W A H EGH +S + SD +
Sbjct: 42 HTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDL-AWSSDS--H 98
Query: 81 VTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWD 140
T +AS D TLR+W DA P + K+LRGH V + N++ SGS+D
Sbjct: 99 YT-CSASDDCTLRIW--DARS----PYEC--LKVLRGHTNFVFCVNFNPPSNLIVSGSFD 149
Query: 141 CTISLW 146
TI +W
Sbjct: 150 ETIRIW 155
Score = 78 (32.5 bits), Expect = 9.2e-11, Sum P(2) = 9.2e-11
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 107 KKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWR-TNDS 151
K R K L GH A++ + GN++ S S D T+ LW TN S
Sbjct: 31 KPYRHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYS 76
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 173 (66.0 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 48/175 (27%), Positives = 85/175 (48%)
Query: 170 EEPQLEGEAIS-TLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGK 227
EEPQ A+ TL GH+ +SSV + P E + S++ D + W G ++ G
Sbjct: 22 EEPQKPNYALRLTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLY-GH 80
Query: 228 ALNCIDIG--GEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSW 285
+L D+ + S L++A D L++WD R G + H+ ++ C ++ S
Sbjct: 81 SLEISDVAWSSDSSRLVSAS-DDKTLKVWDMRS-GKCLKTLK--GHSDFVFCCDFNPPSN 136
Query: 286 FHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADW-WRGDSVISGGVDSKLC 339
++S S+D V +W+++T L + +H D + ++ G ++SG D LC
Sbjct: 137 L-IVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDG-LC 189
Score = 126 (49.4 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 45/134 (33%), Positives = 61/134 (45%)
Query: 21 SLHDDWVSAVD-GSNPGFILTGCYDNLGRVWKAG-GVCTHIL--EGHCGAVSSVNIIK-S 75
S H D +SAV+ N I++G YD L R+W A G C L EG+ V+ +K S
Sbjct: 162 SAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGN----PPVSFVKFS 217
Query: 76 DGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAE---TSGN 132
KY+ AT D TL+LW + + R K GHK + + A T
Sbjct: 218 PNGKYILTATL--DNTLKLWDYS---------RGRCLKTYTGHKNEKYCLFASFSVTGRK 266
Query: 133 MVCSGSWDCTISLW 146
V SGS D + +W
Sbjct: 267 WVVSGSEDNMVYIW 280
Score = 108 (43.1 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 42/147 (28%), Positives = 65/147 (44%)
Query: 13 APQKEEEPSL-----------HDDWVSAVDGSNPG-FILTGCYDNLGRVWKA-GGVCTHI 59
AP++EEEP H +S+V S G ++ + D L +W A G C
Sbjct: 17 APRREEEPQKPNYALRLTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKT 76
Query: 60 LEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHK 119
L GH +S V SD + V+ AS D+TL++W + + K L+GH
Sbjct: 77 LYGHSLEISDV-AWSSDSSRLVS---ASDDKTLKVWDM---------RSGKCLKTLKGHS 123
Query: 120 ASVHSIAAETSGNMVCSGSWDCTISLW 146
V N++ SGS+D ++ +W
Sbjct: 124 DFVFCCDFNPPSNLIVSGSFDESVKIW 150
Score = 101 (40.6 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 35/151 (23%), Positives = 65/151 (43%)
Query: 176 GEAISTLVGHTQCVSSVVWP-QQETIYSASWDHSVRTWDVEMGKDLSDIFC-GKA-LNCI 232
G+ + TL H+ +S+V + I S S+D R WD G+ L + G ++ +
Sbjct: 155 GKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFV 214
Query: 233 DIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWH--NKSWFHLIS 290
G ++ A D L++WD + G + + + + + W ++S
Sbjct: 215 KFSPNGKYILTAT-LDNTLKLWDYSR-GRCLKTYTGHKNEKYCLFASFSVTGRKW--VVS 270
Query: 291 ASYDGKVMLWDLRTAWPLSVIDSHKDKVLCA 321
S D V +W+L+T + + H D V+ A
Sbjct: 271 GSEDNMVYIWNLQTKEIVQRLQGHTDVVISA 301
Score = 59 (25.8 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 115 LRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSD 152
L GH A++ S+ +G + S + D I +W D +
Sbjct: 35 LAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGN 72
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 176 (67.0 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 81/314 (25%), Positives = 134/314 (42%)
Query: 52 AGGVCTHILE----GHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPK 107
A G+ ILE GH A++S + S K + ATAS D L LW L H
Sbjct: 2 ASGLEDPILERSFKGHKAAITSADF--SPNCKQI--ATASWDTFLMLWS-----LKPHA- 51
Query: 108 KIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLW----RTNDSDAAGNQVSIKKR 163
R+++ + GHK V S+ GN++ S S D T+ LW + S+ + ++
Sbjct: 52 --RAYRYV-GHKDVVTSLQFSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSV 108
Query: 164 --KGNNQVEEPQLEGEAIS-----------TLVGHTQCVSSVVW-PQQETIYSASWDHSV 209
+ Q+ E ++I +L HT V + P I S S D ++
Sbjct: 109 DFSADGQLLVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTI 168
Query: 210 RTWDVEMGKDLSDIFCGKA--LNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQ 267
+ WD K + F N +D G+ IA+ GSD ++IWD R + +
Sbjct: 169 KIWDTT-NKQCVNNFSDSVGFANFVDFNPNGTC-IASAGSDHAVKIWDIRM---NKLLQH 223
Query: 268 FSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-G 326
+ H+ ++ +H L++AS DG V + DL + + H V + + G
Sbjct: 224 YQVHSCGVNCLSFHPLG-NSLVTASSDGTVKMLDLIEGRLIYTLQGHTGPVFTVSFSKDG 282
Query: 327 DSVISGGVDSKLCV 340
+ + SGG D+++ +
Sbjct: 283 ELLTSGGADAQVLI 296
Score = 91 (37.1 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 30/109 (27%), Positives = 50/109 (45%)
Query: 195 PQQETIYSASWDHSVRTWDVEMGKDLSDI---FCGKALNCIDIGGEGSALIAAGGSDPIL 251
P I SA DH+V+ WD+ M K L CG +NC+ G++L+ A SD +
Sbjct: 196 PNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCG--VNCLSFHPLGNSLVTAS-SDGTV 252
Query: 252 RIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLW 300
++ D + G ++ H + + +K L S D +V++W
Sbjct: 253 KMLDLIE-GRL--IYTLQGHTGPVFTVSF-SKDGELLTSGGADAQVLIW 297
Score = 82 (33.9 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 34/137 (24%), Positives = 57/137 (41%)
Query: 23 HDDWVSAVDGSNPGFILTGCY-DNLGRVWKAG--GVCTHILEGHCGAVSSVNIIKSDGLK 79
H D V+++ S G +L D R+W G + + H V SV+ +DG
Sbjct: 59 HKDVVTSLQFSPQGNLLASASRDRTVRLWVLDRKGKSSEF-KAHTAPVRSVDF-SADGQL 116
Query: 80 YVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSW 139
VT AS+D+++++W + + + + R H V G ++ S S
Sbjct: 117 LVT---ASEDKSIKVWSMFRQRFL--------YSLYR-HTHWVRCAKFSPDGRLIVSCSE 164
Query: 140 DCTISLWRTNDSDAAGN 156
D TI +W T + N
Sbjct: 165 DKTIKIWDTTNKQCVNN 181
>UNIPROTKB|G4MWF1 [details] [associations]
symbol:MGG_08345 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 EMBL:CM001232
KO:K03361 RefSeq:XP_003715718.1 EnsemblFungi:MGG_08345T0
GeneID:2678612 KEGG:mgr:MGG_08345 Uniprot:G4MWF1
Length = 1033
Score = 180 (68.4 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 75/307 (24%), Positives = 136/307 (44%)
Query: 38 ILTGCYDNLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWK 96
I+TG D L V+ G LEGH G V + ++ +G T+ + S D+++R+W
Sbjct: 667 IITGSDDQLIHVYDTNTGKLRQKLEGHEGGVWA---LQYEGN---TLVSGSTDRSVRVWD 720
Query: 97 FD----AEELVNHPKKIRSFKILR----GHKASVHSIAAETSGNMVCSGSWDCTISLWRT 148
+ + H +R +IL G I + ++ +GS D + +WR
Sbjct: 721 IEKGLCTQVFYGHTSTVRCLQILMPTEVGSDTEGRPIMSPPKP-LIITGSRDSQLRVWRL 779
Query: 149 NDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQETIYSASWDHS 208
+ AG++ I+ N E P + L GHT V ++ +T+ S S+D S
Sbjct: 780 PE---AGSRRYIQTGPPANDAECPYF----LRILQGHTHSVRAIS-AHADTLVSGSYDCS 831
Query: 209 VRTWDVEMGKDLSDIFC-GKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQ 267
VR W + G+ L + + + + + + + I+ G D +++IWD T A ++
Sbjct: 832 VRVWRISTGEQLHWLQGHSQKVYSVVLDHKRNRCIS-GSMDSLVKIWDLE---TGACLYT 887
Query: 268 FSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGD 327
H+ + ++ L+SA+ D + +WD S++ +H + C ++ D
Sbjct: 888 LEGHSLLVGLLDLRDE---RLVSAAADSTLRIWDPENGKCKSILTAHTAAITC---FQHD 941
Query: 328 S--VISG 332
S VISG
Sbjct: 942 SRKVISG 948
>UNIPROTKB|E3W9A3 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IEA]
[GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0031117 "positive regulation
of microtubule depolymerization" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0008352
PANTHER:PTHR19845 IPI:IPI00822740 OMA:NAISRTP GO:GO:0031117
EMBL:AADN02065753 EMBL:AADN02065752 ProteinModelPortal:E3W9A3
Ensembl:ENSGALT00000040450 ArrayExpress:E3W9A3 Uniprot:E3W9A3
Length = 661
Score = 161 (61.7 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 44/157 (28%), Positives = 76/157 (48%)
Query: 179 ISTLVGHTQCVSSV-VWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNC-IDIGG 236
+ +L GHT + S+ + ++E I + S S+R WD+E K L + KA C +D
Sbjct: 56 VMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHP 115
Query: 237 EGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWH-NKSWFHLISASYDG 295
GS +A+G D +++WD R+ G +F++ SH + ++ + W L SA+ D
Sbjct: 116 YGS-FVASGSLDTDIKLWDVRRKGC---IFKYKSHTQAVRCLRFSPDGKW--LASAADDH 169
Query: 296 KVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISG 332
V LWDL + H V ++ + ++G
Sbjct: 170 TVKLWDLTAGKVMFEFTGHYGPVNVVEFHPSEYPLAG 206
Score = 60 (26.2 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 9/33 (27%), Positives = 21/33 (63%)
Query: 118 HKASVHSIA-AETSGNMVCSGSWDCTISLWRTN 149
H ++V S+ +++G ++ +G DC +++W N
Sbjct: 19 HSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVN 51
>ASPGD|ASPL0000042645 [details] [associations]
symbol:AN1468 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR027106 PANTHER:PTHR19846
EMBL:AACD01000022 InterPro:IPR014906 Pfam:PF08799
HOGENOM:HOG000157615 KO:K12662 OMA:CKIWDLR OrthoDB:EOG4V1B90
RefSeq:XP_659072.1 ProteinModelPortal:Q5BDB2 SMR:Q5BDB2
STRING:Q5BDB2 EnsemblFungi:CADANIAT00008085 GeneID:2875152
KEGG:ani:AN1468.2 Uniprot:Q5BDB2
Length = 521
Score = 175 (66.7 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 62/197 (31%), Positives = 89/197 (45%)
Query: 138 SWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLE-GEAISTLVGHTQCVSSVVW-P 195
SW +L +N S++A N VS G V L+ + ++TL GH+ V + P
Sbjct: 246 SWFPGATLPESNVSESAVNFVS---GGGEGNVCLWSLDKDQPLATLEGHSGRVCRTEFHP 302
Query: 196 QQETIYSASWDHSVRTWDVEMGKDLS-DIFCGKALNCIDIGGEGSALIAAGGSDPILRIW 254
+ I SAS+D + R WDVE +L + + + +GS L+A+GG D I R+W
Sbjct: 303 SGKYIASASYDTTWRLWDVETTAELQLQEGHSREVYTVAFNNDGS-LLASGGLDSIGRVW 361
Query: 255 DPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSH 314
D R T V H I W + ++S S DG V WDLR I +H
Sbjct: 362 DLR---TGRTVMILEGHIREIFGLDW-GVDGYRVLSGSGDGWVKCWDLRQVKNTGGIGAH 417
Query: 315 KDKVLCADWWRGDSVIS 331
K V W++G S
Sbjct: 418 KSVVSDVRWYKGSESAS 434
>DICTYBASE|DDB_G0292834 [details] [associations]
symbol:DDB_G0292834 "cyclin-like F-box containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
dictyBase:DDB_G0292834 InterPro:IPR001480 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
EMBL:AAFI02000197 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 PROSITE:PS50927 RefSeq:XP_629376.1
ProteinModelPortal:Q54CP0 STRING:Q54CP0 EnsemblProtists:DDB0237860
GeneID:8628894 KEGG:ddi:DDB_G0292834 OMA:HNEGIRA Uniprot:Q54CP0
Length = 569
Score = 175 (66.7 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 62/258 (24%), Positives = 115/258 (44%)
Query: 83 VATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCT 142
+AT S D ++R+W D E+ K + R H V + + G+ + SGS D T
Sbjct: 286 MATGSLDNSIRIW--DLEK-----GKSKGILTTRAHNFDVFCL--QQIGDQIISGSSDST 336
Query: 143 ISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVV-WPQQETIY 201
+ +W N ++ + + I + + EE L+ ++ +S+ + + ++
Sbjct: 337 VKVW--NIAEIINDSIEIPDTE---EEEEEALQDNVMNDPFAVNNSFTSLPDINEPDHVH 391
Query: 202 SASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGT 261
+ + +T +LS K +C+ ++ +GGSD ++R+WD T
Sbjct: 392 TNIVSVNDKTSTRYRNHNLSSTHTFKHQSCVTCLQVYGNILMSGGSDRVVRVWDLN---T 448
Query: 262 SAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWP-LSVIDSHKDKVLC 320
S P+ S HN I A +++ L++ S D V +WDLR+ +S + H V C
Sbjct: 449 SQPIQILSGHNEGIRALQFNGNV---LVTGSDDTTVRVWDLRSKNSNISTLRGHNGSVRC 505
Query: 321 ADWWRGDSVISGGVDSKL 338
W G ++I+G D +
Sbjct: 506 LQW-DGTTLITGSNDQSV 522
Score = 113 (44.8 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 33/123 (26%), Positives = 56/123 (45%)
Query: 182 LVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGK--ALNCIDIGGEGS 239
L+GHT V ++ E +Y+ S+D + + WD + K G + C+D+
Sbjct: 229 LIGHTGTVWALHL-DDERVYTGSFDKTAKVWDTKT-KKCRFTLAGHYYPIQCLDVNNN-- 284
Query: 240 ALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVML 299
++A G D +RIWD K G S + +HN + + +IS S D V +
Sbjct: 285 -IMATGSLDNSIRIWDLEK-GKSKGILTTRAHNFDVFCLQQIGDQ---IISGSSDSTVKV 339
Query: 300 WDL 302
W++
Sbjct: 340 WNI 342
Score = 93 (37.8 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 30/124 (24%), Positives = 54/124 (43%)
Query: 38 ILTGCYDNLGRVWKAGGV-CTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWK 96
+ TG +D +VW C L GH + +++ + +AT S D ++R+W
Sbjct: 246 VYTGSFDKTAKVWDTKTKKCRFTLAGHYYPIQCLDVNNN------IMATGSLDNSIRIW- 298
Query: 97 FDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGN 156
D E+ K + R H V + + G+ + SGS D T+ +W N ++ +
Sbjct: 299 -DLEK-----GKSKGILTTRAHNFDVFCL--QQIGDQIISGSSDSTVKVW--NIAEIIND 348
Query: 157 QVSI 160
+ I
Sbjct: 349 SIEI 352
Score = 73 (30.8 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 14/53 (26%), Positives = 29/53 (54%)
Query: 288 LISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGGVDSKLCV 340
L+S D V +WDL T+ P+ ++ H + + + G+ +++G D+ + V
Sbjct: 432 LMSGGSDRVVRVWDLNTSQPIQILSGHNEGIRALQF-NGNVLVTGSDDTTVRV 483
>UNIPROTKB|E2QYX6 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=IEA] [GO:0001958 "endochondral ossification"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782 GO:GO:0008611
GO:GO:0016558 GO:GO:0001958 KO:K13341 OMA:GHEYAVR CTD:5191
GO:GO:0005053 GeneTree:ENSGT00700000104578 EMBL:AAEX03000193
RefSeq:XP_541117.2 Ensembl:ENSCAFT00000000399 GeneID:484000
KEGG:cfa:484000 NextBio:20858274 Uniprot:E2QYX6
Length = 323
Score = 141 (54.7 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 38/123 (30%), Positives = 57/123 (46%)
Query: 185 HTQCVSSVVWPQ---QETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEG-SA 240
HTQ V SV W Q ++ + S SWD +V+ WD +GK L +++ I
Sbjct: 110 HTQEVYSVDWSQTRGEQLVVSGSWDQTVKLWDPTVGKSLCTFRGHESVIYSTIWSPHIPG 169
Query: 241 LIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLW 300
A+ D LRIWD + G V +H + I +C W + L++ + D + W
Sbjct: 170 CFASASGDQTLRIWDVKSTGVRIVV---PAHQAEILSCDWCKYNENLLVTGAVDCSLRGW 226
Query: 301 DLR 303
DLR
Sbjct: 227 DLR 229
Score = 131 (51.2 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 47/152 (30%), Positives = 65/152 (42%)
Query: 176 GEAISTLVGHTQCVSSVVW-PQQETIY-SASWDHSVRTWDVEM-G-KDLSDIFCGKALNC 231
G+++ T GH + S +W P + SAS D ++R WDV+ G + + + L+C
Sbjct: 145 GKSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDVKSTGVRIVVPAHQAEILSC 204
Query: 232 IDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFH---L 288
D L+ G D LR WD R PVF+ H I K+ S FH L
Sbjct: 205 -DWCKYNENLLVTGAVDCSLRGWDLRN--VRQPVFELLGHTYAIRRVKF---SPFHASVL 258
Query: 289 ISASYDGKVMLWDLRTAWPLSVIDSHKDKVLC 320
S SYD V W+ PL H + C
Sbjct: 259 ASCSYDFTVRFWNFSKPDPLLETVEHHTEFTC 290
Score = 129 (50.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 38/156 (24%), Positives = 69/156 (44%)
Query: 192 VVWPQ--QETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGE---GSALIAAGG 246
V W + + + + S D S++ WD ++ + G L+ +G
Sbjct: 73 VTWSENNEHILVTCSGDGSLQLWDTAKATGPLQVYKEHTQEVYSVDWSQTRGEQLVVSGS 132
Query: 247 SDPILRIWDPRKPGTSAPVFQFSSHNSWISACKW--HNKSWFHLISASYDGKVMLWDLRT 304
D +++WDP G S F+ H S I + W H F SAS D + +WD+++
Sbjct: 133 WDQTVKLWDPTV-GKSLCTFR--GHESVIYSTIWSPHIPGCF--ASASGDQTLRIWDVKS 187
Query: 305 AWPLSVIDSHKDKVLCADW--WRGDSVISGGVDSKL 338
V+ +H+ ++L DW + + +++G VD L
Sbjct: 188 TGVRIVVPAHQAEILSCDWCKYNENLLVTGAVDCSL 223
Score = 81 (33.6 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 23/74 (31%), Positives = 39/74 (52%)
Query: 75 SDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIA-AETSGN- 132
S+ +++ V T S D +L+LW + K ++ + H V+S+ ++T G
Sbjct: 76 SENNEHILV-TCSGDGSLQLW--------DTAKATGPLQVYKEHTQEVYSVDWSQTRGEQ 126
Query: 133 MVCSGSWDCTISLW 146
+V SGSWD T+ LW
Sbjct: 127 LVVSGSWDQTVKLW 140
>UNIPROTKB|Q08DL6 [details] [associations]
symbol:PEX7 "Peroxisomal biogenesis factor 7" species:9913
"Bos taurus" [GO:0008611 "ether lipid biosynthetic process"
evidence=ISS] [GO:0016558 "protein import into peroxisome matrix"
evidence=ISS] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 GeneTree:ENSGT00700000104578
OrthoDB:EOG483D4V EMBL:DAAA02026741 EMBL:BC123679 IPI:IPI00715205
RefSeq:NP_001070358.1 UniGene:Bt.17803 STRING:Q08DL6
Ensembl:ENSBTAT00000022338 GeneID:533077 KEGG:bta:533077
InParanoid:Q08DL6 NextBio:20875902 Uniprot:Q08DL6
Length = 323
Score = 137 (53.3 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 37/123 (30%), Positives = 57/123 (46%)
Query: 185 HTQCVSSVVWPQ---QETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEG-SA 240
HTQ V SV W Q ++ + S SWD +V+ WD +GK L +++ I
Sbjct: 110 HTQEVYSVDWSQTRGEQLVVSGSWDQTVKLWDPTVGKSLCTFRGHESVIYSTIWSPHIPG 169
Query: 241 LIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLW 300
A+ D LRIWD + G V +H + I +C W + +++ + D + W
Sbjct: 170 CFASSSGDQTLRIWDVKTTGVRIVV---PAHQAEILSCDWCKYNENLVVTGAVDCSLRGW 226
Query: 301 DLR 303
DLR
Sbjct: 227 DLR 229
Score = 137 (53.3 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 40/156 (25%), Positives = 69/156 (44%)
Query: 192 VVWPQ--QETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGE---GSALIAAGG 246
V W + + + + S D S++ WD +F + G L+ +G
Sbjct: 73 VTWSENNEHVLVTCSGDGSLQLWDTARATGPLQVFKEHTQEVYSVDWSQTRGEQLVVSGS 132
Query: 247 SDPILRIWDPRKPGTSAPVFQFSSHNSWISACKW--HNKSWFHLISASYDGKVMLWDLRT 304
D +++WDP G S F+ H S I + W H F S+S D + +WD++T
Sbjct: 133 WDQTVKLWDPTV-GKSLCTFR--GHESVIYSTIWSPHIPGCF--ASSSGDQTLRIWDVKT 187
Query: 305 AWPLSVIDSHKDKVLCADW--WRGDSVISGGVDSKL 338
V+ +H+ ++L DW + + V++G VD L
Sbjct: 188 TGVRIVVPAHQAEILSCDWCKYNENLVVTGAVDCSL 223
Score = 130 (50.8 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 46/152 (30%), Positives = 65/152 (42%)
Query: 176 GEAISTLVGHTQCVSSVVW-PQQETIY-SASWDHSVRTWDVEM-G-KDLSDIFCGKALNC 231
G+++ T GH + S +W P + S+S D ++R WDV+ G + + + L+C
Sbjct: 145 GKSLCTFRGHESVIYSTIWSPHIPGCFASSSGDQTLRIWDVKTTGVRIVVPAHQAEILSC 204
Query: 232 IDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFH---L 288
D L+ G D LR WD R PVF+ H I K+ S FH L
Sbjct: 205 -DWCKYNENLVVTGAVDCSLRGWDLRN--VQQPVFELLGHTYAIRRVKF---SPFHASVL 258
Query: 289 ISASYDGKVMLWDLRTAWPLSVIDSHKDKVLC 320
S SYD V W+ PL H + C
Sbjct: 259 ASCSYDFTVRFWNFSKPDPLLETVEHHTEFTC 290
Score = 82 (33.9 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 27/74 (36%), Positives = 40/74 (54%)
Query: 75 SDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIA-AETSGN- 132
S+ ++V V T S D +L+LW D P ++ FK H V+S+ ++T G
Sbjct: 76 SENNEHVLV-TCSGDGSLQLW--DTARATG-PLQV--FK---EHTQEVYSVDWSQTRGEQ 126
Query: 133 MVCSGSWDCTISLW 146
+V SGSWD T+ LW
Sbjct: 127 LVVSGSWDQTVKLW 140
>DICTYBASE|DDB_G0291566 [details] [associations]
symbol:grwd1 "glutamate-rich WD repeat-containing
protein 1" species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0291566 EMBL:AAFI02000177 GenomeReviews:CM000155_GR
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052
Pfam:PF12265 KO:K14848 OMA:NRLMMLR RefSeq:XP_635306.1
ProteinModelPortal:Q54ED4 STRING:Q54ED4 EnsemblProtists:DDB0267050
GeneID:8628250 KEGG:ddi:DDB_G0291566 ProtClustDB:CLSZ2732316
Uniprot:Q54ED4
Length = 482
Score = 173 (66.0 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 61/242 (25%), Positives = 103/242 (42%)
Query: 63 HCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASV 122
H GAV N I+S + VAT S ++++ +W + NH K + + + A +
Sbjct: 192 HNGAV---NRIRSMDQQSNIVATWSDNRSVYIWN-----IANHLKALDNETVAPKQTAPL 243
Query: 123 HSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTL 182
H+I+ + W I+ R D N + + + + Q
Sbjct: 244 HTISNHSIEGYALD--WSPKIA-GRLATGDC-NNSIFVTNASESTWKTDTQ-------AF 292
Query: 183 VGHTQCVSSVVW-PQQETIY-SASWDHSVRTWDVEMGKDLSDIFCGKA-LNCIDIGGEGS 239
GHT+ V + W P +E ++ S S D +VR WD+ K + A +N I
Sbjct: 293 KGHTESVEDIQWSPSEEKVFASCSIDQTVRIWDIRKPKPAITVKAHTADVNVISWSRNVE 352
Query: 240 ALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVML 299
L+ +G D R+WD R ++PV F H I++ +W+ +I +S D +V +
Sbjct: 353 YLLVSGCDDGSFRVWDLRAFKDNSPVSDFKYHTGPITSIEWNPYEESQVIVSSSDDQVTI 412
Query: 300 WD 301
WD
Sbjct: 413 WD 414
Score = 116 (45.9 bits), Expect = 0.00069, P = 0.00069
Identities = 52/235 (22%), Positives = 93/235 (39%)
Query: 118 HKASVHSIAA-ETSGNMVCSGSWDCTISLWR-TNDSDAAGNQ-VSIKKRKGNNQVEEPQL 174
H +V+ I + + N+V + S + ++ +W N A N+ V+ K+ + + +
Sbjct: 192 HNGAVNRIRSMDQQSNIVATWSDNRSVYIWNIANHLKALDNETVAPKQTAPLHTISNHSI 251
Query: 175 EGEAI--STLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCI 232
EG A+ S + +I+ + S TW + + F G +
Sbjct: 252 EGYALDWSPKIAGRLATGDC----NNSIFVTNASES--TWKTD-----TQAFKGHTESVE 300
Query: 233 DIGGEGSA--LIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLIS 290
DI S + A+ D +RIWD RKP P +H + ++ W + L+S
Sbjct: 301 DIQWSPSEEKVFASCSIDQTVRIWDIRKP---KPAITVKAHTADVNVISWSRNVEYLLVS 357
Query: 291 ASYDGKVMLWDLRTAW---PLSVIDSHKDKVLCADW--WRGDSVISGGVDSKLCV 340
DG +WDLR P+S H + +W + VI D ++ +
Sbjct: 358 GCDDGSFRVWDLRAFKDNSPVSDFKYHTGPITSIEWNPYEESQVIVSSSDDQVTI 412
>DICTYBASE|DDB_G0295761 [details] [associations]
symbol:nle1 "putative notchless" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0295761 InterPro:IPR001632
GO:GO:0005634 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
KO:K14855 OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154
RefSeq:XP_002649195.1 ProteinModelPortal:C7FZX3
EnsemblProtists:DDB0252725 GeneID:8616962 KEGG:ddi:DDB_G0295761
Uniprot:C7FZX3
Length = 507
Score = 142 (55.0 bits), Expect = 9.6e-07, P = 9.6e-07
Identities = 71/278 (25%), Positives = 118/278 (42%)
Query: 44 DNLGRVWKAGGVCTHI--LEGHCGAVSSVNIIK--SDGLKYVTVATASKDQTLRLWKFDA 99
D+ R+W C ++ L GH SV +K +GL Y + S+D+T+R++
Sbjct: 251 DSTIRIWDTES-CKNLMSLSGH---TMSVTCLKWGGEGLIY----SGSQDRTVRVFNTTD 302
Query: 100 EELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCT------------ISLWR 147
LV ++L GH V+++A T ++ +GS+D T ++L R
Sbjct: 303 GRLV---------RVLDGHAHWVNTLALNTD-YVLRTGSYDHTGKEYDTLEEAQRVALER 352
Query: 148 TNDSDAA--GNQVSIKKRKGNNQVE-EPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSA 203
ND A G ++ I + P + +IS L GH Q ++ V + P SA
Sbjct: 353 YNDVKAKSKGMEILISGSDDFTVIMWNPSVTKTSISRLTGHQQLINLVSFSPDGRYFASA 412
Query: 204 SWDHSVRTWDVEMGKDLSDIFCGKALNCIDI-GGEGSALIAAGGSDPILRIWDPRKPGTS 262
S+D S++ WD + GK L + F G + S + +G D L+IWD + T
Sbjct: 413 SFDKSIKLWDGQSGKFLGN-FRGHVGAVYQVCWSSDSRYLVSGSKDSTLKIWDIK---TK 468
Query: 263 APVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLW 300
+ H + W + + S S D + +W
Sbjct: 469 KMEKELPGHADEVYTVDW-SPDGDRVASGSKDRLLRIW 505
Score = 128 (50.1 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 40/162 (24%), Positives = 63/162 (38%)
Query: 180 STLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIG-GE 237
S++ GHT+ V + + P + S D +VR WD+ + G + +
Sbjct: 134 SSMSGHTEAVLNCAFSPDGKGFVSVGGDTTVRIWDIYTSTPTHTLK-GHTNWVLQVAWSP 192
Query: 238 GSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKW---H-NKSWFHLISASY 293
S IA G + +RIW P+ + H +I+ W H N L S+S
Sbjct: 193 DSKKIATAGMEGDIRIWCPQTGKQLGSTLK--GHTKFITGLSWEPFHLNPKCVRLASSSK 250
Query: 294 DGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGGVD 335
D + +WD + L + H V C W + SG D
Sbjct: 251 DSTIRIWDTESCKNLMSLSGHTMSVTCLKWGGEGLIYSGSQD 292
Score = 124 (48.7 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 39/145 (26%), Positives = 61/145 (42%)
Query: 198 ETIYSASWDHSVRTWDVEMGKDLSDIFCG--KALNCIDIGGEGSALIAAGGSDPILRIWD 255
E + S S D +V W+ + K G + +N + +G A+ D +++WD
Sbjct: 364 EILISGSDDFTVIMWNPSVTKTSISRLTGHQQLINLVSFSPDGR-YFASASFDKSIKLWD 422
Query: 256 PRKPGTSAPVF-QFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSH 314
G S F H + W + S + L+S S D + +WD++T + H
Sbjct: 423 ----GQSGKFLGNFRGHVGAVYQVCWSSDSRY-LVSGSKDSTLKIWDIKTKKMEKELPGH 477
Query: 315 KDKVLCADWWR-GDSVISGGVDSKL 338
D+V DW GD V SG D L
Sbjct: 478 ADEVYTVDWSPDGDRVASGSKDRLL 502
Score = 119 (46.9 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 39/139 (28%), Positives = 69/139 (49%)
Query: 164 KGNNQVEEPQLEGEAISTLVGHTQCVSSVVW------PQQETIYSASWDHSVRTWDVEMG 217
+G+ ++ PQ + STL GHT+ ++ + W P+ + S+S D ++R WD E
Sbjct: 203 EGDIRIWCPQTGKQLGSTLKGHTKFITGLSWEPFHLNPKCVRLASSSKDSTIRIWDTESC 262
Query: 218 KDLSDIFCGKALN--CIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWI 275
K+L + G ++ C+ GGEG LI +G D +R+++ G V +H W+
Sbjct: 263 KNLMSL-SGHTMSVTCLKWGGEG--LIYSGSQDRTVRVFNTTD-GRLVRVLDGHAH--WV 316
Query: 276 SACKWHNKSWFHLISASYD 294
+ + + L + SYD
Sbjct: 317 NTLALNTD--YVLRTGSYD 333
Score = 95 (38.5 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 39/132 (29%), Positives = 61/132 (46%)
Query: 23 HDDWVSAVDGS-NPGFILTGCYDNLGRVW--KAGGVCTHILEGHCGAVSSVNIIKSD-GL 78
H +WV V S + I T + R+W + G L+GH ++ ++
Sbjct: 181 HTNWVLQVAWSPDSKKIATAGMEGDIRIWCPQTGKQLGSTLKGHTKFITGLSWEPFHLNP 240
Query: 79 KYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGS 138
K V +A++SKD T+R+W D E K + S L GH SV + G ++ SGS
Sbjct: 241 KCVRLASSSKDSTIRIW--DTESC----KNLMS---LSGHTMSVTCLKWGGEG-LIYSGS 290
Query: 139 WDCTISLWRTND 150
D T+ ++ T D
Sbjct: 291 QDRTVRVFNTTD 302
Score = 51 (23.0 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 21/91 (23%), Positives = 34/91 (37%)
Query: 56 CTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKIL 115
C + GH AV + DG +V+V D T+R+W + P L
Sbjct: 132 CASSMSGHTEAVLNC-AFSPDGKGFVSVGG---DTTVRIWDI----YTSTPTHT-----L 178
Query: 116 RGHKASVHSIAAETSGNMVCSGSWDCTISLW 146
+GH V +A + + + I +W
Sbjct: 179 KGHTNWVLQVAWSPDSKKIATAGMEGDIRIW 209
Score = 42 (19.8 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 13/60 (21%), Positives = 24/60 (40%)
Query: 87 SKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLW 146
S + TL ++ + + + R + GH +V + A G S D T+ +W
Sbjct: 109 SDETTLSIY-YQPQAVFRVRPVTRCASSMSGHTEAVLNCAFSPDGKGFVSVGGDTTVRIW 167
>UNIPROTKB|Q32PJ6 [details] [associations]
symbol:CIAO1 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1" species:9913 "Bos taurus" [GO:0097361 "CIA
complex" evidence=ISS] [GO:0071817 "MMXD complex" evidence=ISS]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0007059 "chromosome segregation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226 GO:GO:0071817
HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:BC108091 IPI:IPI00699811
RefSeq:NP_001032559.1 RefSeq:XP_003585196.1 UniGene:Bt.51463
ProteinModelPortal:Q32PJ6 STRING:Q32PJ6 Ensembl:ENSBTAT00000020797
GeneID:100850134 GeneID:540069 KEGG:bta:100850134 KEGG:bta:540069
CTD:9391 GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532
InParanoid:Q32PJ6 OrthoDB:EOG4MCX0N NextBio:20878397 GO:GO:0097361
Uniprot:Q32PJ6
Length = 339
Score = 126 (49.4 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 53/204 (25%), Positives = 93/204 (45%)
Query: 23 HDDWVSAVDGSNPGFILTGCY-DNLGRVWKAGGV----CTHILEGHCGAVSSVNIIKSDG 77
H++ V +V + G +L C D VW+ C +L H V V S
Sbjct: 104 HENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQE 163
Query: 78 LKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSG 137
L +A+AS D T++L++ + ++ V L GH+++V S+A + SG + S
Sbjct: 164 L----LASASYDDTVKLYREEEDDWV-------CCATLEGHESTVWSLAFDPSGQRLASC 212
Query: 138 SWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVG-HTQCVSSVVWPQ 196
S D T+ +WR GN+ + G+ + + + TL G H++ + V W Q
Sbjct: 213 SDDRTVRIWRQY---LPGNEQGVAC-SGS------EASWKCVCTLSGFHSRTIYDVAWCQ 262
Query: 197 QE-TIYSASWDHSVRTWDVEMGKD 219
T+ +A D ++R ++ + G D
Sbjct: 263 LTGTLATACGDDAIRVFEEDPGSD 286
Score = 110 (43.8 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 43/128 (33%), Positives = 55/128 (42%)
Query: 168 QVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCG 226
+V+E E E +S L HTQ V VVW P QE + SAS+D +V+ + E +D D C
Sbjct: 133 EVDEED-EYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREE--ED--DWVCC 187
Query: 227 KALN-------CIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACK 279
L + G L A+ D +RIW PG V S SW C
Sbjct: 188 ATLEGHESTVWSLAFDPSGQRL-ASCSDDRTVRIWRQYLPGNEQGVACSGSEASWKCVC- 245
Query: 280 WHNKSWFH 287
S FH
Sbjct: 246 --TLSGFH 251
Score = 105 (42.0 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 38/125 (30%), Positives = 58/125 (46%)
Query: 34 NP-GFILTGCY-DNLGRVWKAGG---VCTHIL-EGHCGAVSSVNIIKSDGLKYVTVATAS 87
NP G +L C D R+W G +C +L EGH V V S Y+ A+AS
Sbjct: 25 NPAGTLLASCGGDRSVRIWGREGDSWICKSVLCEGHQRTVRKV--AWSPCGNYL--ASAS 80
Query: 88 KDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWR 147
D T +WK + ++ L GH+ V S+A SGN++ + S D ++ +W
Sbjct: 81 FDATTCIWKKNEDDF-------ECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWE 133
Query: 148 TNDSD 152
++ D
Sbjct: 134 VDEED 138
Score = 59 (25.8 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 255 DPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLW 300
DP++P S +H+ ++ W+ K L S S DG++ W
Sbjct: 286 DPQQPTFSLTAHVPQAHSQDVNCVAWNPKERGLLASCSDDGELAFW 331
Score = 46 (21.3 bits), Expect = 4.0e-06, Sum P(3) = 4.0e-06
Identities = 13/50 (26%), Positives = 19/50 (38%)
Query: 175 EGEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIF 224
+G A S +CV ++ TIY +W T G D +F
Sbjct: 230 QGVACSGSEASWKCVCTLSGFHSRTIYDVAWCQLTGTLATACGDDAIRVF 279
>ASPGD|ASPL0000008575 [details] [associations]
symbol:AN6217 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:BN001301 EMBL:AACD01000105 KO:K03361
RefSeq:XP_663821.1 ProteinModelPortal:Q5AZR3 STRING:Q5AZR3
EnsemblFungi:CADANIAT00006785 GeneID:2870808 KEGG:ani:AN6217.2
HOGENOM:HOG000164406 OMA:SISEGRC OrthoDB:EOG4XWK5Z Uniprot:Q5AZR3
Length = 618
Score = 173 (66.0 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 76/300 (25%), Positives = 128/300 (42%)
Query: 35 PGFILTGCYDNLG-RVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLR 93
P +I+ DN V+ G LEGH V ++ + D + + + D+ +R
Sbjct: 263 PKYIVASL-DNAKIHVYDTNGENQKTLEGHVMGVWAM--VPWDNI----LVSGGCDREVR 315
Query: 94 LWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLW--RTND- 150
+W E S +LRGH ++V + N SGS D T+ +W RT
Sbjct: 316 VWNMATGE---------SIYLLRGHTSTVRCLKMSDK-NTAISGSRDTTLRIWDLRTGTC 365
Query: 151 -SDAAGNQVSIK--KRKGNNQVEEPQ---------LEGEAISTLVGHTQCVSSVVWPQQE 198
S G+Q S++ G+ V EG + L GH + ++ + +
Sbjct: 366 RSVLVGHQASVRCLAVHGDIVVSGSYDTTARVWSISEGRFLRALSGHFSQIYAIAFDGRR 425
Query: 199 TIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRK 258
I + S D SVR WD G+ I G + G L+ GGSD +R+W +
Sbjct: 426 -IATGSLDTSVRIWDPNTGQ-CHAILQGHTSLVGQLQMSGDTLVT-GGSDGSVRVWSLTR 482
Query: 259 PGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKV 318
AP+ + ++H++ +++ ++ N ++S DG+V +W LRT L + + D V
Sbjct: 483 ---MAPIHRLAAHDNSVTSLQFDNN---RIVSGGSDGRVKVWCLRTGQLLRELSTPSDTV 536
Score = 137 (53.3 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 45/168 (26%), Positives = 75/168 (44%)
Query: 176 GEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKA-LNCIDI 234
GE+I L GHT V + + T S S D ++R WD+ G S + +A + C+ +
Sbjct: 322 GESIYLLRGHTSTVRCLKMSDKNTAISGSRDTTLRIWDLRTGTCRSVLVGHQASVRCLAV 381
Query: 235 GGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYD 294
G+ ++ +G D R+W + G S H S I A + + + + S D
Sbjct: 382 HGD---IVVSGSYDTTARVWSISE-GRFLRAL--SGHFSQIYAIAFDGR---RIATGSLD 432
Query: 295 GKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGGVDSKLCVSS 342
V +WD T +++ H V GD++++GG D + V S
Sbjct: 433 TSVRIWDPNTGQCHAILQGHTSLVGQLQM-SGDTLVTGGSDGSVRVWS 479
>UNIPROTKB|O76071 [details] [associations]
symbol:CIAO1 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1" species:9606 "Homo sapiens" [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0016226 "iron-sulfur
cluster assembly" evidence=IGI] [GO:0071817 "MMXD complex"
evidence=IDA] [GO:0097361 "CIA complex" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0008284 "positive regulation of cell
proliferation" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008284 eggNOG:COG2319
GO:GO:0006357 GO:GO:0016226 GO:GO:0071817 HOGENOM:HOG000208901
OMA:SWKCVCT CTD:9391 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:U63810 EMBL:EF011618 EMBL:AC004020 EMBL:CR456802
EMBL:AK223257 EMBL:BC001395 EMBL:BC032812 IPI:IPI00008791
RefSeq:NP_004795.1 UniGene:Hs.12109 PDB:3FM0 PDBsum:3FM0
ProteinModelPortal:O76071 SMR:O76071 IntAct:O76071
MINT:MINT-1416717 STRING:O76071 PhosphoSite:O76071 PaxDb:O76071
PeptideAtlas:O76071 PRIDE:O76071 DNASU:9391 Ensembl:ENST00000488633
GeneID:9391 KEGG:hsa:9391 UCSC:uc002svs.3 GeneCards:GC02P096931
HGNC:HGNC:14280 HPA:HPA017882 MIM:604333 neXtProt:NX_O76071
PharmGKB:PA162382269 InParanoid:O76071 PhylomeDB:O76071
ChiTaRS:CIAO1 EvolutionaryTrace:O76071 GenomeRNAi:9391
NextBio:35187 Bgee:O76071 CleanEx:HS_CIAO1 Genevestigator:O76071
GermOnline:ENSG00000144021 Uniprot:O76071
Length = 339
Score = 116 (45.9 bits), Expect = 0.00039, P = 0.00039
Identities = 61/254 (24%), Positives = 108/254 (42%)
Query: 23 HDDWVSAVDGSNPGFILTGCY-DNLGRVWKAGGV----CTHILEGHCGAVSSVNIIKSDG 77
H++ V +V + G +L C D VW+ C +L H V V S
Sbjct: 104 HENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQE 163
Query: 78 LKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSG 137
L +A+AS D T++L++ + ++ V L GH+++V S+A + SG + S
Sbjct: 164 L----LASASYDDTVKLYREEEDDWV-------CCATLEGHESTVWSLAFDPSGQRLASC 212
Query: 138 SWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVG-HTQCVSSVVWPQ 196
S D T+ +WR GN+ + G+ +P + I TL G H++ + + W Q
Sbjct: 213 SDDRTVRIWRQY---LPGNEQGVAC-SGS----DPSWK--CICTLSGFHSRTIYDIAWCQ 262
Query: 197 QE-TIYSASWDHSVRTWDVEMGKDLSD-IFCGKA---------LNCIDIGGEGSALIAAG 245
+ +A D ++R + + D F A +NC+ + L+A+
Sbjct: 263 LTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASC 322
Query: 246 GSDPILRIWDPRKP 259
D + W ++P
Sbjct: 323 SDDGEVAFWKYQRP 336
Score = 108 (43.1 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
Identities = 43/128 (33%), Positives = 55/128 (42%)
Query: 168 QVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCG 226
+V+E E E +S L HTQ V VVW P QE + SAS+D +V+ + E +D D C
Sbjct: 133 EVDEED-EYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREE--ED--DWVCC 187
Query: 227 KALN-------CIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACK 279
L + G L A+ D +RIW PG V S SW C
Sbjct: 188 ATLEGHESTVWSLAFDPSGQRL-ASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCIC- 245
Query: 280 WHNKSWFH 287
S FH
Sbjct: 246 --TLSGFH 251
Score = 105 (42.0 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
Identities = 38/125 (30%), Positives = 58/125 (46%)
Query: 34 NP-GFILTGCY-DNLGRVWKAGG---VCTHIL-EGHCGAVSSVNIIKSDGLKYVTVATAS 87
NP G +L C D R+W G +C +L EGH V V S Y+ A+AS
Sbjct: 25 NPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKV--AWSPCGNYL--ASAS 80
Query: 88 KDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWR 147
D T +WK + ++ L GH+ V S+A SGN++ + S D ++ +W
Sbjct: 81 FDATTCIWKKNQDDF-------ECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWE 133
Query: 148 TNDSD 152
++ D
Sbjct: 134 VDEED 138
Score = 68 (29.0 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 21/67 (31%), Positives = 31/67 (46%)
Query: 240 ALIAAGGSDPILRIW------DPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASY 293
AL A G D I R++ DP++P S +H+ ++ W+ K L S S
Sbjct: 266 ALATACGDDAI-RVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSD 324
Query: 294 DGKVMLW 300
DG+V W
Sbjct: 325 DGEVAFW 331
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 120 (47.3 bits), Expect = 0.00015, P = 0.00015
Identities = 41/164 (25%), Positives = 71/164 (43%)
Query: 180 STLVGHTQCVSSVVWPQQET-IYSASWDHSVRTWDVEMGKDLSDIFCGKA-LNCIDIGGE 237
+TL GH+ V + + + ++SAS D +V WD E G+ + + + +N
Sbjct: 103 ATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARR 162
Query: 238 GSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKV 297
G L+ G D +++WD RK + FQ N++ N + +IS D +
Sbjct: 163 GPQLVCTGSDDGTVKLWDIRKKA-AIQTFQ----NTYQVLAVTFNDTSDQIISGGIDNDI 217
Query: 298 MLWDLRTAWPLSVIDSHKDKVLCADWW-RGDSVISGGVDSKLCV 340
+WDLR + H D V G ++S +D+ + V
Sbjct: 218 KVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRV 261
Score = 118 (46.6 bits), Expect = 0.00026, P = 0.00026
Identities = 43/166 (25%), Positives = 74/166 (44%)
Query: 179 ISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDI--G 235
I L GH V + P T+ SA +D + W+V D G + +++
Sbjct: 59 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN 118
Query: 236 GEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDG 295
+GS L +A +D + +WD T V + H S++++C + + + S DG
Sbjct: 119 TDGSMLFSAS-TDKTVAVWDSE---TGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDG 174
Query: 296 KVMLWDLRTAWPLSVIDSHKDKVLCADWW-RGDSVISGGVDSKLCV 340
V LWD+R + + +VL + D +ISGG+D+ + V
Sbjct: 175 TVKLWDIRKKAAIQTFQNTY-QVLAVTFNDTSDQIISGGIDNDIKV 219
Score = 114 (45.2 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
Identities = 36/116 (31%), Positives = 57/116 (49%)
Query: 34 NPGFILTGCYDNLGRVWKAGGVCTHI--LEGHCGAVSSVNIIKSDGLKYVTVATASKDQT 91
N + + +D L +W G C + L+GH GAV ++ +DG + +AS D+T
Sbjct: 77 NGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHY-NTDGSM---LFSASTDKT 132
Query: 92 LRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSG-NMVCSGSWDCTISLW 146
+ +W + E V K L+GH + V+S G +VC+GS D T+ LW
Sbjct: 133 VAVWDSETGERV---------KRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLW 179
Score = 99 (39.9 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
Identities = 36/148 (24%), Positives = 61/148 (41%)
Query: 178 AISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKA--LNCIDIG 235
AI T Q ++ + I S D+ ++ WD+ K L+ G A + + +
Sbjct: 186 AIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNK-LTYTMRGHADSVTGLSLS 244
Query: 236 GEGSALIAAGGSDPILRIWD--PRKPGTSA-PVFQFSSHN--SWISACKWHNKSWFHLIS 290
EGS L++ D +R+WD P P +FQ + HN + C W + + +
Sbjct: 245 SEGSYLLS-NAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSW-SPDGSKIAA 302
Query: 291 ASYDGKVMLWDLRTAWPLSVIDSHKDKV 318
S D V +WD + L + H +
Sbjct: 303 GSADRFVYVWDTTSRRILYKLPGHAGSI 330
Score = 98 (39.6 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 30/135 (22%), Positives = 60/135 (44%)
Query: 176 GEAISTLVGHTQCVSSVVWPQQ---ETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCI 232
GE + L GHT V+S +P + + + + S D +V+ WD+ + + +
Sbjct: 141 GERVKRLKGHTSFVNSC-YPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAV 199
Query: 233 DIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISAS 292
+I+ GG D +++WD R+ + + H ++ ++ + L+S +
Sbjct: 200 TFNDTSDQIIS-GGIDNDIKVWDLRQ---NKLTYTMRGHADSVTGLSLSSEGSY-LLSNA 254
Query: 293 YDGKVMLWDLRTAWP 307
D V +WD+R P
Sbjct: 255 MDNTVRVWDVRPFAP 269
Score = 83 (34.3 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 30/108 (27%), Positives = 51/108 (47%)
Query: 59 ILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGH 118
+L GH G V + T+A+A D+ + LW + ++ L+GH
Sbjct: 61 LLSGHEGEVYCCKFHPNGS----TLASAGFDRLILLWNVYGD--------CDNYATLKGH 108
Query: 119 KASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGN 166
+V + T G+M+ S S D T+++W DS+ G +V K+ KG+
Sbjct: 109 SGAVMELHYNTDGSMLFSASTDKTVAVW---DSET-GERV--KRLKGH 150
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 120 (47.3 bits), Expect = 0.00015, P = 0.00015
Identities = 41/164 (25%), Positives = 71/164 (43%)
Query: 180 STLVGHTQCVSSVVWPQQET-IYSASWDHSVRTWDVEMGKDLSDIFCGKA-LNCIDIGGE 237
+TL GH+ V + + + ++SAS D +V WD E G+ + + + +N
Sbjct: 104 ATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARR 163
Query: 238 GSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKV 297
G L+ G D +++WD RK + FQ N++ N + +IS D +
Sbjct: 164 GPQLVCTGSDDGTVKLWDIRKKA-AIQTFQ----NTYQVLAVTFNDTSDQIISGGIDNDI 218
Query: 298 MLWDLRTAWPLSVIDSHKDKVLCADWW-RGDSVISGGVDSKLCV 340
+WDLR + H D V G ++S +D+ + V
Sbjct: 219 KVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRV 262
Score = 118 (46.6 bits), Expect = 0.00026, P = 0.00026
Identities = 43/166 (25%), Positives = 74/166 (44%)
Query: 179 ISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDI--G 235
I L GH V + P T+ SA +D + W+V D G + +++
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN 119
Query: 236 GEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDG 295
+GS L +A +D + +WD T V + H S++++C + + + S DG
Sbjct: 120 TDGSMLFSAS-TDKTVAVWDSE---TGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDG 175
Query: 296 KVMLWDLRTAWPLSVIDSHKDKVLCADWW-RGDSVISGGVDSKLCV 340
V LWD+R + + +VL + D +ISGG+D+ + V
Sbjct: 176 TVKLWDIRKKAAIQTFQNTY-QVLAVTFNDTSDQIISGGIDNDIKV 220
Score = 114 (45.2 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
Identities = 36/116 (31%), Positives = 57/116 (49%)
Query: 34 NPGFILTGCYDNLGRVWKAGGVCTHI--LEGHCGAVSSVNIIKSDGLKYVTVATASKDQT 91
N + + +D L +W G C + L+GH GAV ++ +DG + +AS D+T
Sbjct: 78 NGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHY-NTDGSM---LFSASTDKT 133
Query: 92 LRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSG-NMVCSGSWDCTISLW 146
+ +W + E V K L+GH + V+S G +VC+GS D T+ LW
Sbjct: 134 VAVWDSETGERV---------KRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLW 180
Score = 99 (39.9 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
Identities = 36/148 (24%), Positives = 61/148 (41%)
Query: 178 AISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKA--LNCIDIG 235
AI T Q ++ + I S D+ ++ WD+ K L+ G A + + +
Sbjct: 187 AIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNK-LTYTMRGHADSVTGLSLS 245
Query: 236 GEGSALIAAGGSDPILRIWD--PRKPGTSA-PVFQFSSHN--SWISACKWHNKSWFHLIS 290
EGS L++ D +R+WD P P +FQ + HN + C W + + +
Sbjct: 246 SEGSYLLS-NAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSW-SPDGSKIAA 303
Query: 291 ASYDGKVMLWDLRTAWPLSVIDSHKDKV 318
S D V +WD + L + H +
Sbjct: 304 GSADRFVYVWDTTSRRILYKLPGHAGSI 331
Score = 98 (39.6 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 30/135 (22%), Positives = 60/135 (44%)
Query: 176 GEAISTLVGHTQCVSSVVWPQQ---ETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCI 232
GE + L GHT V+S +P + + + + S D +V+ WD+ + + +
Sbjct: 142 GERVKRLKGHTSFVNSC-YPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAV 200
Query: 233 DIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISAS 292
+I+ GG D +++WD R+ + + H ++ ++ + L+S +
Sbjct: 201 TFNDTSDQIIS-GGIDNDIKVWDLRQ---NKLTYTMRGHADSVTGLSLSSEGSY-LLSNA 255
Query: 293 YDGKVMLWDLRTAWP 307
D V +WD+R P
Sbjct: 256 MDNTVRVWDVRPFAP 270
Score = 83 (34.3 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 30/108 (27%), Positives = 51/108 (47%)
Query: 59 ILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGH 118
+L GH G V + T+A+A D+ + LW + ++ L+GH
Sbjct: 62 LLSGHEGEVYCCKFHPNGS----TLASAGFDRLILLWNVYGD--------CDNYATLKGH 109
Query: 119 KASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGN 166
+V + T G+M+ S S D T+++W DS+ G +V K+ KG+
Sbjct: 110 SGAVMELHYNTDGSMLFSASTDKTVAVW---DSET-GERV--KRLKGH 151
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 120 (47.3 bits), Expect = 0.00015, P = 0.00015
Identities = 41/164 (25%), Positives = 71/164 (43%)
Query: 180 STLVGHTQCVSSVVWPQQET-IYSASWDHSVRTWDVEMGKDLSDIFCGKA-LNCIDIGGE 237
+TL GH+ V + + + ++SAS D +V WD E G+ + + + +N
Sbjct: 104 ATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARR 163
Query: 238 GSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKV 297
G L+ G D +++WD RK + FQ N++ N + +IS D +
Sbjct: 164 GPQLVCTGSDDGTVKLWDIRKKA-AIQTFQ----NTYQVLAVTFNDTSDQIISGGIDNDI 218
Query: 298 MLWDLRTAWPLSVIDSHKDKVLCADWW-RGDSVISGGVDSKLCV 340
+WDLR + H D V G ++S +D+ + V
Sbjct: 219 KVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRV 262
Score = 118 (46.6 bits), Expect = 0.00026, P = 0.00026
Identities = 43/166 (25%), Positives = 74/166 (44%)
Query: 179 ISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDI--G 235
I L GH V + P T+ SA +D + W+V D G + +++
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN 119
Query: 236 GEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDG 295
+GS L +A +D + +WD T V + H S++++C + + + S DG
Sbjct: 120 TDGSMLFSAS-TDKTVAVWDSE---TGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDG 175
Query: 296 KVMLWDLRTAWPLSVIDSHKDKVLCADWW-RGDSVISGGVDSKLCV 340
V LWD+R + + +VL + D +ISGG+D+ + V
Sbjct: 176 TVKLWDIRKKAAIQTFQNTY-QVLAVTFNDTSDQIISGGIDNDIKV 220
Score = 114 (45.2 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
Identities = 36/116 (31%), Positives = 57/116 (49%)
Query: 34 NPGFILTGCYDNLGRVWKAGGVCTHI--LEGHCGAVSSVNIIKSDGLKYVTVATASKDQT 91
N + + +D L +W G C + L+GH GAV ++ +DG + +AS D+T
Sbjct: 78 NGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHY-NTDGSM---LFSASTDKT 133
Query: 92 LRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSG-NMVCSGSWDCTISLW 146
+ +W + E V K L+GH + V+S G +VC+GS D T+ LW
Sbjct: 134 VAVWDSETGERV---------KRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLW 180
Score = 99 (39.9 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
Identities = 36/148 (24%), Positives = 61/148 (41%)
Query: 178 AISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKA--LNCIDIG 235
AI T Q ++ + I S D+ ++ WD+ K L+ G A + + +
Sbjct: 187 AIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNK-LTYTMRGHADSVTGLSLS 245
Query: 236 GEGSALIAAGGSDPILRIWD--PRKPGTSA-PVFQFSSHN--SWISACKWHNKSWFHLIS 290
EGS L++ D +R+WD P P +FQ + HN + C W + + +
Sbjct: 246 SEGSYLLS-NAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSW-SPDGSKIAA 303
Query: 291 ASYDGKVMLWDLRTAWPLSVIDSHKDKV 318
S D V +WD + L + H +
Sbjct: 304 GSADRFVYVWDTTSRRILYKLPGHAGSI 331
Score = 98 (39.6 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 30/135 (22%), Positives = 60/135 (44%)
Query: 176 GEAISTLVGHTQCVSSVVWPQQ---ETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCI 232
GE + L GHT V+S +P + + + + S D +V+ WD+ + + +
Sbjct: 142 GERVKRLKGHTSFVNSC-YPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAV 200
Query: 233 DIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISAS 292
+I+ GG D +++WD R+ + + H ++ ++ + L+S +
Sbjct: 201 TFNDTSDQIIS-GGIDNDIKVWDLRQ---NKLTYTMRGHADSVTGLSLSSEGSY-LLSNA 255
Query: 293 YDGKVMLWDLRTAWP 307
D V +WD+R P
Sbjct: 256 MDNTVRVWDVRPFAP 270
Score = 83 (34.3 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 30/108 (27%), Positives = 51/108 (47%)
Query: 59 ILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGH 118
+L GH G V + T+A+A D+ + LW + ++ L+GH
Sbjct: 62 LLSGHEGEVYCCKFHPNGS----TLASAGFDRLILLWNVYGD--------CDNYATLKGH 109
Query: 119 KASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGN 166
+V + T G+M+ S S D T+++W DS+ G +V K+ KG+
Sbjct: 110 SGAVMELHYNTDGSMLFSASTDKTVAVW---DSET-GERV--KRLKGH 151
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 120 (47.3 bits), Expect = 0.00015, P = 0.00015
Identities = 41/164 (25%), Positives = 71/164 (43%)
Query: 180 STLVGHTQCVSSVVWPQQET-IYSASWDHSVRTWDVEMGKDLSDIFCGKA-LNCIDIGGE 237
+TL GH+ V + + + ++SAS D +V WD E G+ + + + +N
Sbjct: 104 ATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARR 163
Query: 238 GSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKV 297
G L+ G D +++WD RK + FQ N++ N + +IS D +
Sbjct: 164 GPQLVCTGSDDGTVKLWDIRKKA-AIQTFQ----NTYQVLAVTFNDTSDQIISGGIDNDI 218
Query: 298 MLWDLRTAWPLSVIDSHKDKVLCADWW-RGDSVISGGVDSKLCV 340
+WDLR + H D V G ++S +D+ + V
Sbjct: 219 KVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRV 262
Score = 118 (46.6 bits), Expect = 0.00026, P = 0.00026
Identities = 43/166 (25%), Positives = 74/166 (44%)
Query: 179 ISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDI--G 235
I L GH V + P T+ SA +D + W+V D G + +++
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN 119
Query: 236 GEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDG 295
+GS L +A +D + +WD T V + H S++++C + + + S DG
Sbjct: 120 TDGSMLFSAS-TDKTVAVWDSE---TGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDG 175
Query: 296 KVMLWDLRTAWPLSVIDSHKDKVLCADWW-RGDSVISGGVDSKLCV 340
V LWD+R + + +VL + D +ISGG+D+ + V
Sbjct: 176 TVKLWDIRKKAAIQTFQNTY-QVLAVTFNDTSDQIISGGIDNDIKV 220
Score = 114 (45.2 bits), Expect = 6.6e-10, Sum P(2) = 6.6e-10
Identities = 36/116 (31%), Positives = 57/116 (49%)
Query: 34 NPGFILTGCYDNLGRVWKAGGVCTHI--LEGHCGAVSSVNIIKSDGLKYVTVATASKDQT 91
N + + +D L +W G C + L+GH GAV ++ +DG + +AS D+T
Sbjct: 78 NGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHY-NTDGSM---LFSASTDKT 133
Query: 92 LRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSG-NMVCSGSWDCTISLW 146
+ +W + E V K L+GH + V+S G +VC+GS D T+ LW
Sbjct: 134 VAVWDSETGERV---------KRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLW 180
Score = 98 (39.6 bits), Expect = 6.6e-10, Sum P(2) = 6.6e-10
Identities = 36/148 (24%), Positives = 61/148 (41%)
Query: 178 AISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKA--LNCIDIG 235
AI T Q ++ + I S D+ ++ WD+ K L+ G A + + +
Sbjct: 187 AIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNK-LTYTMRGHADSVTGLSLS 245
Query: 236 GEGSALIAAGGSDPILRIWD--PRKPGTSAP-VFQFSSHN--SWISACKWHNKSWFHLIS 290
EGS L++ D +R+WD P P +FQ + HN + C W + + +
Sbjct: 246 SEGSYLLS-NAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRCSW-SPDGSKIAA 303
Query: 291 ASYDGKVMLWDLRTAWPLSVIDSHKDKV 318
S D V +WD + L + H +
Sbjct: 304 GSADRFVYVWDTTSRRILYKLPGHAGSI 331
Score = 98 (39.6 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 30/135 (22%), Positives = 60/135 (44%)
Query: 176 GEAISTLVGHTQCVSSVVWPQQ---ETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCI 232
GE + L GHT V+S +P + + + + S D +V+ WD+ + + +
Sbjct: 142 GERVKRLKGHTSFVNSC-YPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAV 200
Query: 233 DIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISAS 292
+I+ GG D +++WD R+ + + H ++ ++ + L+S +
Sbjct: 201 TFNDTSDQIIS-GGIDNDIKVWDLRQ---NKLTYTMRGHADSVTGLSLSSEGSY-LLSNA 255
Query: 293 YDGKVMLWDLRTAWP 307
D V +WD+R P
Sbjct: 256 MDNTVRVWDVRPFAP 270
Score = 83 (34.3 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 30/108 (27%), Positives = 51/108 (47%)
Query: 59 ILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGH 118
+L GH G V + T+A+A D+ + LW + ++ L+GH
Sbjct: 62 LLSGHEGEVYCCKFHPNGS----TLASAGFDRLILLWNVYGD--------CDNYATLKGH 109
Query: 119 KASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGN 166
+V + T G+M+ S S D T+++W DS+ G +V K+ KG+
Sbjct: 110 SGAVMELHYNTDGSMLFSASTDKTVAVW---DSET-GERV--KRLKGH 151
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 120 (47.3 bits), Expect = 0.00019, P = 0.00019
Identities = 41/164 (25%), Positives = 71/164 (43%)
Query: 180 STLVGHTQCVSSVVWPQQET-IYSASWDHSVRTWDVEMGKDLSDIFCGKA-LNCIDIGGE 237
+TL GH+ V + + + ++SAS D +V WD E G+ + + + +N
Sbjct: 103 ATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARR 162
Query: 238 GSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKV 297
G L+ G D +++WD RK + FQ N++ N + +IS D +
Sbjct: 163 GPQLVCTGSDDGTVKLWDIRKKA-AIQTFQ----NTYQVLAVTFNDTSDQIISGGIDNDI 217
Query: 298 MLWDLRTAWPLSVIDSHKDKVLCADWW-RGDSVISGGVDSKLCV 340
+WDLR + H D V G ++S +D+ + V
Sbjct: 218 KVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRV 261
Score = 118 (46.6 bits), Expect = 0.00032, P = 0.00032
Identities = 43/166 (25%), Positives = 74/166 (44%)
Query: 179 ISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDI--G 235
I L GH V + P T+ SA +D + W+V D G + +++
Sbjct: 59 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN 118
Query: 236 GEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDG 295
+GS L +A +D + +WD T V + H S++++C + + + S DG
Sbjct: 119 TDGSMLFSAS-TDKTVAVWDSE---TGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDG 174
Query: 296 KVMLWDLRTAWPLSVIDSHKDKVLCADWW-RGDSVISGGVDSKLCV 340
V LWD+R + + +VL + D +ISGG+D+ + V
Sbjct: 175 TVKLWDIRKKAAIQTFQNTY-QVLAVTFNDTSDQIISGGIDNDIKV 219
Score = 114 (45.2 bits), Expect = 8.1e-10, Sum P(2) = 8.1e-10
Identities = 36/116 (31%), Positives = 57/116 (49%)
Query: 34 NPGFILTGCYDNLGRVWKAGGVCTHI--LEGHCGAVSSVNIIKSDGLKYVTVATASKDQT 91
N + + +D L +W G C + L+GH GAV ++ +DG + +AS D+T
Sbjct: 77 NGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHY-NTDGSM---LFSASTDKT 132
Query: 92 LRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSG-NMVCSGSWDCTISLW 146
+ +W + E V K L+GH + V+S G +VC+GS D T+ LW
Sbjct: 133 VAVWDSETGERV---------KRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLW 179
Score = 99 (39.9 bits), Expect = 8.1e-10, Sum P(2) = 8.1e-10
Identities = 36/148 (24%), Positives = 61/148 (41%)
Query: 178 AISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKA--LNCIDIG 235
AI T Q ++ + I S D+ ++ WD+ K L+ G A + + +
Sbjct: 186 AIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNK-LTYTMRGHADSVTGLSLS 244
Query: 236 GEGSALIAAGGSDPILRIWD--PRKPGTSA-PVFQFSSHN--SWISACKWHNKSWFHLIS 290
EGS L++ D +R+WD P P +FQ + HN + C W + + +
Sbjct: 245 SEGSYLLS-NAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSW-SPDGSKIAA 302
Query: 291 ASYDGKVMLWDLRTAWPLSVIDSHKDKV 318
S D V +WD + L + H +
Sbjct: 303 GSADRFVYVWDTTSRRILYKLPGHAGSI 330
Score = 98 (39.6 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 30/135 (22%), Positives = 60/135 (44%)
Query: 176 GEAISTLVGHTQCVSSVVWPQQ---ETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCI 232
GE + L GHT V+S +P + + + + S D +V+ WD+ + + +
Sbjct: 141 GERVKRLKGHTSFVNSC-YPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAV 199
Query: 233 DIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISAS 292
+I+ GG D +++WD R+ + + H ++ ++ + L+S +
Sbjct: 200 TFNDTSDQIIS-GGIDNDIKVWDLRQ---NKLTYTMRGHADSVTGLSLSSEGSY-LLSNA 254
Query: 293 YDGKVMLWDLRTAWP 307
D V +WD+R P
Sbjct: 255 MDNTVRVWDVRPFAP 269
Score = 83 (34.3 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 30/108 (27%), Positives = 51/108 (47%)
Query: 59 ILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGH 118
+L GH G V + T+A+A D+ + LW + ++ L+GH
Sbjct: 61 LLSGHEGEVYCCKFHPNGS----TLASAGFDRLILLWNVYGD--------CDNYATLKGH 108
Query: 119 KASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGN 166
+V + T G+M+ S S D T+++W DS+ G +V K+ KG+
Sbjct: 109 SGAVMELHYNTDGSMLFSASTDKTVAVW---DSET-GERV--KRLKGH 150
>UNIPROTKB|Q5JKX0 [details] [associations]
symbol:B1147A04.35 "cDNA clone:J013000B23, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0001700
"embryonic development via the syncytial blastoderm" evidence=ISS]
[GO:0005623 "cell" evidence=ISS] [GO:0009909 "regulation of flower
development" evidence=ISS;IDA] [GO:0031124 "mRNA 3'-end processing"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0001700 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0005623 GO:GO:0009909
GO:GO:0031124 GO:GO:0080008 EMBL:AP003735 EMBL:AK111493
STRING:Q5JKX0 EnsemblPlants:LOC_Os01g72220.1 OMA:FACAISD
Uniprot:Q5JKX0
Length = 527
Score = 162 (62.1 bits), Expect = 8.4e-10, Sum P(2) = 8.4e-10
Identities = 44/159 (27%), Positives = 75/159 (47%)
Query: 181 TLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKAL-NCIDIGGEG 238
+L GH V SV W P + + S D+ V+ WD + G++L K + C+ G
Sbjct: 86 SLTGHGWDVKSVDWHPTKSLLVSGGKDYLVKLWDAKSGRELRSFHGHKNIVQCVKWNQNG 145
Query: 239 SALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVM 298
+ ++ A D I++++D R + + F HN ++A WH + +S SYDG +
Sbjct: 146 NWVLTAS-KDQIIKLYDIR---SMKELESFRGHNKDVTALAWHPFHEEYFVSGSYDGAIF 201
Query: 299 LWDLRTAWP-LSVIDSHKDKVLCADWWR-GDSVISGGVD 335
W + P + + ++H + V W G + SGG D
Sbjct: 202 HWLVGHETPQIEINNAHDNSVWDLAWHPVGYLLCSGGND 240
Score = 49 (22.3 bits), Expect = 8.4e-10, Sum P(2) = 8.4e-10
Identities = 11/46 (23%), Positives = 23/46 (50%)
Query: 114 ILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVS 159
IL+ H +V S+ + N + +G I W++N ++ N+ +
Sbjct: 2 ILQAHDQAVRSMIWSNNENWMVTGDDGGAIKYWQSNMNNVKVNKTA 47
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 120 (47.3 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 37/141 (26%), Positives = 62/141 (43%)
Query: 180 STLVGHTQCVSSVVWPQQET-IYSASWDHSVRTWDVEMGKDLSDIFCGKA-LNCIDIGGE 237
+TL GH+ V + + + ++SAS D +V WD E G+ + + + +N
Sbjct: 130 ATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARR 189
Query: 238 GSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKV 297
G L+ G D +++WD RK + FQ N++ N + +IS D +
Sbjct: 190 GPQLVCTGSDDGTVKLWDIRKKA-AVQTFQ----NTYQVLAVTFNDTSDQIISGGIDNDI 244
Query: 298 MLWDLRTAWPLSVIDSHKDKV 318
+WDLR + H D V
Sbjct: 245 KVWDLRQNKLTYTMRGHADSV 265
Score = 115 (45.5 bits), Expect = 0.00063, P = 0.00063
Identities = 40/160 (25%), Positives = 70/160 (43%)
Query: 184 GHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDI--GGEGSAL 241
G C W T+ SA +D + W+V D G + +++ +GS L
Sbjct: 94 GEVYCCKFHPWGN--TLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSML 151
Query: 242 IAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWD 301
+A +D + +WD T V + H S++++C + + + S DG V LWD
Sbjct: 152 FSAS-TDKTVAVWDSE---TGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 207
Query: 302 LRTAWPLSVIDSHKDKVLCADWW-RGDSVISGGVDSKLCV 340
+R + + +VL + D +ISGG+D+ + V
Sbjct: 208 IRKKAAVQTFQNTY-QVLAVTFNDTSDQIISGGIDNDIKV 246
Score = 113 (44.8 bits), Expect = 8.5e-10, Sum P(2) = 8.5e-10
Identities = 35/107 (32%), Positives = 54/107 (50%)
Query: 43 YDNLGRVWKAGGVCTHI--LEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAE 100
+D L +W G C + L+GH GAV ++ +DG + +AS D+T+ +W +
Sbjct: 113 FDRLILLWNVYGDCDNYATLKGHSGAVMELHY-NTDGSM---LFSASTDKTVAVWDSETG 168
Query: 101 ELVNHPKKIRSFKILRGHKASVHSIAAETSG-NMVCSGSWDCTISLW 146
E V K L+GH + V+S G +VC+GS D T+ LW
Sbjct: 169 ERV---------KRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLW 206
Score = 100 (40.3 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 41/170 (24%), Positives = 74/170 (43%)
Query: 176 GEAISTLVGHTQCVSSVVWPQQ---ETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCI 232
GE + L GHT V+S +P + + + + S D +V+ WD+ K F
Sbjct: 168 GERVKRLKGHTSFVNSC-YPARRGPQLVCTGSDDGTVKLWDIRK-KAAVQTFQNTYQVLA 225
Query: 233 DIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISAS 292
+ S I +GG D +++WD R+ + + H ++ ++ + L+S +
Sbjct: 226 VTFNDTSDQIISGGIDNDIKVWDLRQ---NKLTYTMRGHADSVTGLSLSSEGSY-LLSNA 281
Query: 293 YDGKVMLWDLRTAWPL---------SVIDSHKDKVLCADWWRGDSVISGG 333
D V +WD+R P +V + K+ + C+ W S I+GG
Sbjct: 282 MDNTVRIWDVRPFAPKERCVKIFQGNVHNFEKNLLRCS-WSPDGSKIAGG 330
Score = 99 (39.9 bits), Expect = 8.5e-10, Sum P(2) = 8.5e-10
Identities = 37/148 (25%), Positives = 60/148 (40%)
Query: 178 AISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKA--LNCIDIG 235
A+ T Q ++ + I S D+ ++ WD+ K L+ G A + + +
Sbjct: 213 AVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNK-LTYTMRGHADSVTGLSLS 271
Query: 236 GEGSALIAAGGSDPILRIWD--PRKPGTSA-PVFQFSSHN--SWISACKWHNKSWFHLIS 290
EGS L++ D +RIWD P P +FQ + HN + C W + +
Sbjct: 272 SEGSYLLS-NAMDNTVRIWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSW-SPDGSKIAG 329
Query: 291 ASYDGKVMLWDLRTAWPLSVIDSHKDKV 318
S D V +WD + L + H V
Sbjct: 330 GSADRFVYVWDTTSRRILYKLPGHAGSV 357
Score = 81 (33.6 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 25/85 (29%), Positives = 44/85 (51%)
Query: 82 TVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDC 141
T+A+A D+ + LW + ++ L+GH +V + T G+M+ S S D
Sbjct: 107 TLASAGFDRLILLWNVYGD--------CDNYATLKGHSGAVMELHYNTDGSMLFSASTDK 158
Query: 142 TISLWRTNDSDAAGNQVSIKKRKGN 166
T+++W DS+ G +V K+ KG+
Sbjct: 159 TVAVW---DSET-GERV--KRLKGH 177
Score = 59 (25.8 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 16/53 (30%), Positives = 23/53 (43%)
Query: 114 ILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRT-NDSDAAGNQVSIKKRKG 165
+L GH+ V+ GN + S +D I LW D D N ++K G
Sbjct: 88 LLSGHEGEVYCCKFHPWGNTLASAGFDRLILLWNVYGDCD---NYATLKGHSG 137
>UNIPROTKB|F1S687 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=IEA] [GO:0001958 "endochondral ossification"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782 GO:GO:0008611
GO:GO:0016558 GO:GO:0001958 OMA:GHEYAVR GO:GO:0005053
GeneTree:ENSGT00700000104578 EMBL:CU407212
ProteinModelPortal:F1S687 Ensembl:ENSSSCT00000004599 Uniprot:F1S687
Length = 315
Score = 139 (54.0 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 46/172 (26%), Positives = 76/172 (44%)
Query: 138 SWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEA--ISTLVGHTQCVSSVVWP 195
S+D T +L+ S+ N+ + G+ ++ G A + HTQ V SV W
Sbjct: 63 SFDWTDALFDVTWSE--NNEHVLVTCSGDGSLQLWDTAGAAGPLQVYKEHTQEVYSVDWS 120
Query: 196 Q---QETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEG-SALIAAGGSDPIL 251
Q ++ + S SWD +V+ WD +G+ L +++ I A+ D L
Sbjct: 121 QTRGEQLVVSGSWDQTVKLWDPTVGRSLCTFKGHESIIYSTIWSPHIPGCFASASGDQTL 180
Query: 252 RIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLR 303
RIWD + G V +H + I +C W + L++ + D + WDLR
Sbjct: 181 RIWDVKTTGVRIVV---PAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLR 229
Score = 137 (53.3 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 40/162 (24%), Positives = 71/162 (43%)
Query: 186 TQCVSSVVWPQ--QETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGE---GSA 240
T + V W + + + + S D S++ WD ++ + G
Sbjct: 67 TDALFDVTWSENNEHVLVTCSGDGSLQLWDTAGAAGPLQVYKEHTQEVYSVDWSQTRGEQ 126
Query: 241 LIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKW--HNKSWFHLISASYDGKVM 298
L+ +G D +++WDP G S + F H S I + W H F SAS D +
Sbjct: 127 LVVSGSWDQTVKLWDPTV-GRS--LCTFKGHESIIYSTIWSPHIPGCF--ASASGDQTLR 181
Query: 299 LWDLRTAWPLSVIDSHKDKVLCADW--WRGDSVISGGVDSKL 338
+WD++T V+ +H+ ++L DW + + +++G VD L
Sbjct: 182 IWDVKTTGVRIVVPAHQAEILSCDWCKYNENLLVTGAVDCSL 223
Score = 127 (49.8 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 44/149 (29%), Positives = 61/149 (40%)
Query: 176 GEAISTLVGHTQCVSSVVW-PQQETIY-SASWDHSVRTWDVEM-G-KDLSDIFCGKALNC 231
G ++ T GH + S +W P + SAS D ++R WDV+ G + + + L+C
Sbjct: 145 GRSLCTFKGHESIIYSTIWSPHIPGCFASASGDQTLRIWDVKTTGVRIVVPAHQAEILSC 204
Query: 232 IDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291
D L+ G D LR WD R PVF+ H I K+ L S
Sbjct: 205 -DWCKYNENLLVTGAVDCSLRGWDLRN--VRQPVFELLGHTYAIRRVKFSPFYASVLASC 261
Query: 292 SYDGKVMLWDLRTAWPLSVIDSHKDKVLC 320
SYD V W+ PL H + C
Sbjct: 262 SYDFTVRFWNFSKPNPLLETVEHHTEFTC 290
Score = 79 (32.9 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 25/74 (33%), Positives = 39/74 (52%)
Query: 75 SDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIA-AETSGN- 132
S+ ++V V T S D +L+LW D P ++ + H V+S+ ++T G
Sbjct: 76 SENNEHVLV-TCSGDGSLQLW--DTAGAAG-P-----LQVYKEHTQEVYSVDWSQTRGEQ 126
Query: 133 MVCSGSWDCTISLW 146
+V SGSWD T+ LW
Sbjct: 127 LVVSGSWDQTVKLW 140
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 159 (61.0 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 45/158 (28%), Positives = 74/158 (46%)
Query: 179 ISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKA-LNCIDIGG 236
I +L GHT V + + +E + + S S+R WD+E K L + KA ++ +D
Sbjct: 56 IMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHP 115
Query: 237 EGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWH-NKSWFHLISASYDG 295
G L A+G D +++WD R+ G VF++ H + + + W L SAS D
Sbjct: 116 MGEYL-ASGSVDSNIKLWDVRRKGC---VFRYKGHTQAVRCLAFSPDGKW--LASASDDS 169
Query: 296 KVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGG 333
V LWDL ++ SH V + + +++ G
Sbjct: 170 TVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLLASG 207
Score = 159 (61.0 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 54/206 (26%), Positives = 97/206 (47%)
Query: 118 HKASVHSIA-AETSGNMVCSGSWDCTISLWRTNDSDA----AGNQVS---IKKRKGNNQV 169
H ++V S+ ++SG ++ +G DC +++W + + G+ + I+ +V
Sbjct: 19 HSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEERV 78
Query: 170 EEPQLEG-------EA---ISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGK 218
L G EA + TL+GH +SS+ + P E + S S D +++ WDV K
Sbjct: 79 VAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRR-K 137
Query: 219 DLSDIFCG--KALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWIS 276
+ G +A+ C+ +G L A+ D +++WD + +F+SH S ++
Sbjct: 138 GCVFRYKGHTQAVRCLAFSPDGKWL-ASASDDSTVKLWDLI---AGKMITEFTSHTSAVN 193
Query: 277 ACKWHNKSWFHLISASYDGKVMLWDL 302
++H + L S S D V LWDL
Sbjct: 194 VVQFHPNEYL-LASGSADRTVKLWDL 218
Score = 126 (49.4 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 32/106 (30%), Positives = 48/106 (45%)
Query: 234 IGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASY 293
+G L+A GG D + IW KP + + H S + C N S +++ S
Sbjct: 28 LGKSSGRLLATGGEDCRVNIWAVSKPNC---IMSLTGHTSAVG-CIQFNSSEERVVAGSL 83
Query: 294 DGKVMLWDLRTAWPLSVIDSHKDKVLCADWW-RGDSVISGGVDSKL 338
G + LWDL A L + HK + D+ G+ + SG VDS +
Sbjct: 84 SGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNI 129
Score = 118 (46.6 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 42/134 (31%), Positives = 58/134 (43%)
Query: 16 KEEEPSLHDDWVSA-VDGSNPGFIL-TGCYDNLGRVWKAGGV-CTHILEGHCGAVSSVNI 72
K +E H VS+ V G + G +L TG D +W C L GH AV +
Sbjct: 12 KLQEIVAHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQF 71
Query: 73 IKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGN 132
S+ V S +LRLW +A +++ + L GHKAS+ S+ G
Sbjct: 72 NSSEE----RVVAGSLSGSLRLWDLEAAKIL---------RTLMGHKASISSLDFHPMGE 118
Query: 133 MVCSGSWDCTISLW 146
+ SGS D I LW
Sbjct: 119 YLASGSVDSNIKLW 132
Score = 99 (39.9 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 24/77 (31%), Positives = 42/77 (54%)
Query: 184 GHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCG-KALNCIDIGGEGSAL 241
GHTQ V + + P + + SAS D +V+ WD+ GK +++ A+N + L
Sbjct: 145 GHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFH-PNEYL 203
Query: 242 IAAGGSDPILRIWDPRK 258
+A+G +D +++WD K
Sbjct: 204 LASGSADRTVKLWDLEK 220
Score = 78 (32.5 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 25/88 (28%), Positives = 44/88 (50%)
Query: 174 LEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDL--SDIFCGKALN 230
+ G+ I+ HT V+ V + P + + S S D +V+ WD+E + S+ G +
Sbjct: 177 IAGKMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSSEGETG-VVR 235
Query: 231 CIDIGGEGSALIAAGGSDPILRI--WDP 256
+ +GS L + GS+ LR+ W+P
Sbjct: 236 SVLFNPDGSCLYS--GSENTLRVYGWEP 261
>UNIPROTKB|O00628 [details] [associations]
symbol:PEX7 "Peroxisomal targeting signal 2 receptor"
species:9606 "Homo sapiens" [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0008611
"ether lipid biosynthetic process" evidence=IMP] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=IDA]
[GO:0016558 "protein import into peroxisome matrix"
evidence=IDA;IMP] [GO:0007031 "peroxisome organization"
evidence=IMP] [GO:0005777 "peroxisome" evidence=IDA] [GO:0019899
"enzyme binding" evidence=IPI] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0005782 "peroxisomal
matrix" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 GO:GO:0042803 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782
GO:GO:0008611 Orphanet:177 GO:GO:0016558 GO:GO:0001958 Orphanet:773
TCDB:3.A.20.1.1 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 EMBL:U88871 EMBL:U76560
EMBL:AF180814 EMBL:AF180806 EMBL:AF180807 EMBL:AF180808
EMBL:AF180809 EMBL:AF180810 EMBL:AF180811 EMBL:AF180812
EMBL:AF180813 EMBL:BC006268 IPI:IPI00012577 RefSeq:NP_000279.1
UniGene:Hs.280932 ProteinModelPortal:O00628 SMR:O00628
IntAct:O00628 STRING:O00628 PhosphoSite:O00628 PRIDE:O00628
DNASU:5191 Ensembl:ENST00000318471 GeneID:5191 KEGG:hsa:5191
UCSC:uc003qhd.3 GeneCards:GC06P137185 HGNC:HGNC:8860 HPA:HPA049202
MIM:215100 MIM:601757 MIM:614879 neXtProt:NX_O00628
PharmGKB:PA33202 InParanoid:O00628 PhylomeDB:O00628 GenomeRNAi:5191
NextBio:20076 ArrayExpress:O00628 Bgee:O00628 CleanEx:HS_PEX7
Genevestigator:O00628 GermOnline:ENSG00000112357 Uniprot:O00628
Length = 323
Score = 138 (53.6 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 41/156 (26%), Positives = 70/156 (44%)
Query: 192 VVWPQ--QETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGE---GSALIAAGG 246
V W + + + + S D S++ WD ++ A + G L+ +G
Sbjct: 73 VTWSENNEHVLITCSGDGSLQLWDTAKAAGPLQVYKEHAQEVYSVDWSQTRGEQLVVSGS 132
Query: 247 SDPILRIWDPRKPGTSAPVFQFSSHNSWISACKW--HNKSWFHLISASYDGKVMLWDLRT 304
D +++WDP G S F+ H S I + W H F SAS D + +WD++
Sbjct: 133 WDQTVKLWDPTV-GKSLCTFR--GHESIIYSTIWSPHIPGCF--ASASGDQTLRIWDVKA 187
Query: 305 AWPLSVIDSHKDKVLCADW--WRGDSVISGGVDSKL 338
A VI +H+ ++L DW + + +++G VD L
Sbjct: 188 AGVRIVIPAHQAEILSCDWCKYNENLLVTGAVDCSL 223
Score = 135 (52.6 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 36/123 (29%), Positives = 56/123 (45%)
Query: 185 HTQCVSSVVWPQ---QETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEG-SA 240
H Q V SV W Q ++ + S SWD +V+ WD +GK L +++ I
Sbjct: 110 HAQEVYSVDWSQTRGEQLVVSGSWDQTVKLWDPTVGKSLCTFRGHESIIYSTIWSPHIPG 169
Query: 241 LIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLW 300
A+ D LRIWD + G + +H + I +C W + L++ + D + W
Sbjct: 170 CFASASGDQTLRIWDVKAAGVRIVI---PAHQAEILSCDWCKYNENLLVTGAVDCSLRGW 226
Query: 301 DLR 303
DLR
Sbjct: 227 DLR 229
Score = 125 (49.1 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 46/154 (29%), Positives = 68/154 (44%)
Query: 176 GEAISTLVGHTQCVSSVVW-PQQETIY-SASWDHSVRTWDVEMG--KDLSDIFCGKALNC 231
G+++ T GH + S +W P + SAS D ++R WDV+ + + + L+C
Sbjct: 145 GKSLCTFRGHESIIYSTIWSPHIPGCFASASGDQTLRIWDVKAAGVRIVIPAHQAEILSC 204
Query: 232 IDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFH---L 288
D L+ G D LR WD R PVF+ H I K+ S FH L
Sbjct: 205 -DWCKYNENLLVTGAVDCSLRGWDLRN--VRQPVFELLGHTYAIRRVKF---SPFHASVL 258
Query: 289 ISASYDGKVMLWDLRTAWPLSVIDS--HKDKVLC 320
S SYD V W+ P S++++ H + C
Sbjct: 259 ASCSYDFTVRFWNFSK--PDSLLETVEHHTEFTC 290
Score = 81 (33.6 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 23/74 (31%), Positives = 39/74 (52%)
Query: 75 SDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIA-AETSGN- 132
S+ ++V + T S D +L+LW + K ++ + H V+S+ ++T G
Sbjct: 76 SENNEHVLI-TCSGDGSLQLW--------DTAKAAGPLQVYKEHAQEVYSVDWSQTRGEQ 126
Query: 133 MVCSGSWDCTISLW 146
+V SGSWD T+ LW
Sbjct: 127 LVVSGSWDQTVKLW 140
>RGD|1309121 [details] [associations]
symbol:Fbxw11 "F-box and WD repeat domain containing 11"
species:10116 "Rattus norvegicus" [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006470
"protein dephosphorylation" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISO] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0031648 "protein destabilization" evidence=ISO] [GO:0042347
"negative regulation of NF-kappaB import into nucleus"
evidence=ISO] [GO:0042753 "positive regulation of circadian rhythm"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045862 "positive regulation
of proteolysis" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 RGD:1309121 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 IPI:IPI00368750 Ensembl:ENSRNOT00000005874
UCSC:RGD:1309121 ArrayExpress:F1M7I4 Uniprot:F1M7I4
Length = 493
Score = 167 (63.8 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 67/288 (23%), Positives = 125/288 (43%)
Query: 38 ILTGCYDNLGRVW-KAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWK 96
I++G DN ++W K+ C +L GH G SV ++ D + T S D T+R+W
Sbjct: 204 IISGLRDNSIKIWDKSSLECLKVLTGHTG---SVLCLQYDER---VIVTGSSDSTVRVWD 257
Query: 97 FDAEELVN----HPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSD 152
+ E++N H + + + G + + +M + + D T+
Sbjct: 258 VNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDM--ASATDITLRRVLVGHR- 314
Query: 153 AAGNQVS-----IKKRKGNNQVEEPQLEG-EAISTLVGHTQCVSSVVWPQQETIYSASWD 206
AA N V I G+ ++ E + TL GH + ++ + + + + S S D
Sbjct: 315 AAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY-RDRLVVSGSSD 373
Query: 207 HSVRTWDVEMGKDLSDIFCGKAL-NCIDIGGEGSALIAAGGSDPILRIWD------PRKP 259
+++R WD+E G L + + L CI + I +G D +++WD PR P
Sbjct: 374 NTIRLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLQAALDPRAP 430
Query: 260 GTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWP 307
++ + H+ + ++ F +IS+S+D +++WD P
Sbjct: 431 ASTLCLRTLVEHSGRVFRLQFDE---FQIISSSHDDTILIWDFLNVPP 475
Score = 142 (55.0 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 40/169 (23%), Positives = 80/169 (47%)
Query: 176 GEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLS--DIFCGK--ALNC 231
GE ++TL+ H + V + + + + S D S+ WD+ D++ + G A+N
Sbjct: 261 GEVLNTLIHHNEAVLHLRF-SNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNV 319
Query: 232 IDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291
+D + +++A G D +++W T V + H I+ ++ ++ ++S
Sbjct: 320 VDF--DDKYIVSASG-DRTIKVWST---STCEFVRTLNGHKRGIACLQYRDRL---VVSG 370
Query: 292 SYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGGVDSKLCV 340
S D + LWD+ L V++ H++ V C + ++SG D K+ V
Sbjct: 371 SSDNTIRLWDIECGACLRVLEGHEELVRCIRF-DNKRIVSGAYDGKIKV 418
>DICTYBASE|DDB_G0275323 [details] [associations]
symbol:tipD "autophagy protein 16" species:44689
"Dictyostelium discoideum" [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0031154 "culmination involved in sorocarp
development" evidence=IMP] [GO:0034274 "Atg12-Atg5-Atg16 complex"
evidence=ISS] [GO:0019776 "Atg8 ligase activity" evidence=ISS]
[GO:0016236 "macroautophagy" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275323
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013923 Pfam:PF08614 OMA:LETECQE
GenomeReviews:CM000151_GR EMBL:AAFI02000013 GO:GO:0031154
GO:GO:0016236 GO:GO:0034274 GO:GO:0019776 EMBL:AF019236 PIR:T08602
RefSeq:XP_643673.1 ProteinModelPortal:O15736 STRING:O15736
EnsemblProtists:DDB0215341 GeneID:8619939 KEGG:ddi:DDB_G0275323
ProtClustDB:CLSZ2729185 Uniprot:O15736
Length = 612
Score = 150 (57.9 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 44/154 (28%), Positives = 71/154 (46%)
Query: 174 LEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKD-------LSDIFC 225
+ G+ STL+G +Q + SV + P E+I S D+S R W+ E+G+ + ++
Sbjct: 354 ISGQQKSTLLGASQSIVSVSFSPNDESILGTSNDNSARLWNTELGRSRHTLTGHIGKVYT 413
Query: 226 GKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSW 285
GK +N S + G D +++WD +K + +F FSS N + S
Sbjct: 414 GKFIN--------SNRVVTGSHDRTIKLWDLQKGYCTRTIFCFSSCNDLVIL----GGSG 461
Query: 286 FHLISASYDGKVMLWDLRTAWPLSVIDS-HKDKV 318
HL S D V WD P V+ S H+ ++
Sbjct: 462 THLASGHVDHSVRFWDSNAGEPTQVLSSIHEGQI 495
Score = 136 (52.9 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 50/195 (25%), Positives = 82/195 (42%)
Query: 156 NQVSIKKRKGNNQVEEPQLE-GEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDV 214
N SI +N E G + TL GH V + + + + S D +++ WD+
Sbjct: 377 NDESILGTSNDNSARLWNTELGRSRHTLTGHIGKVYTGKFINSNRVVTGSHDRTIKLWDL 436
Query: 215 EMGKDLSDIFCGKALN-CIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNS 273
+ G IFC + N + +GG G+ L A+G D +R WD G V S H
Sbjct: 437 QKGYCTRTIFCFSSCNDLVILGGSGTHL-ASGHVDHSVRFWDSNA-GEPTQVLS-SIHEG 493
Query: 274 WISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLC--ADW----WRGD 327
I++ + +++ S D + + D+RT I + KD +W W D
Sbjct: 494 QITSITNSPTNTNQILTNSRDHTLKIIDIRT---FDTIRTFKDPEYRNGLNWTKASWSPD 550
Query: 328 S--VISGGVDSKLCV 340
+ SG +D +C+
Sbjct: 551 GRYIASGSIDGSICI 565
Score = 103 (41.3 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 41/160 (25%), Positives = 65/160 (40%)
Query: 175 EGEAISTLVGHTQCVSSVVWPQQET-IYSASWDHSVRTWDVEMGKD---LSDIFCGKALN 230
+G T+ + C V+ T + S DHSVR WD G+ LS I G+ +
Sbjct: 438 KGYCTRTIFCFSSCNDLVILGGSGTHLASGHVDHSVRFWDSNAGEPTQVLSSIHEGQ-IT 496
Query: 231 CIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWF---- 286
I + I D L+I D R T F+ + + ++ W SW
Sbjct: 497 SITNSPTNTNQILTNSRDHTLKIIDIRTFDTIR-TFKDPEYRNGLN---WTKASWSPDGR 552
Query: 287 HLISASYDGKVMLWDL---RTAWPLSVIDSHKDKVLCADW 323
++ S S DG + +WD +T L+ + ++ V C W
Sbjct: 553 YIASGSIDGSICIWDATNGKTVKVLTKVHNNGSSVCCCSW 592
Score = 62 (26.9 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 13/50 (26%), Positives = 27/50 (54%)
Query: 97 FDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLW 146
F +E ++ P K + K GH + ++ +A + GN++ +G D + +W
Sbjct: 306 FSSEAML--PSKAK--KRWTGHNSEIYCMAFNSIGNLLATGGGDKCVKVW 351
>DICTYBASE|DDB_G0287635 [details] [associations]
symbol:prpf4 "pre-mRNA processing factor 4"
species:44689 "Dictyostelium discoideum" [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287635
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR EMBL:AAFI02000103 GO:GO:0000398
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0046540
InterPro:IPR014906 Pfam:PF08799 KO:K12662 OMA:CIATVSH
RefSeq:XP_637144.1 ProteinModelPortal:Q54K20 STRING:Q54K20
EnsemblProtists:DDB0233058 GeneID:8626239 KEGG:ddi:DDB_G0287635
InParanoid:Q54K20 ProtClustDB:CLSZ2497485 Uniprot:Q54K20
Length = 600
Score = 168 (64.2 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 75/318 (23%), Positives = 123/318 (38%)
Query: 27 VSAVDGSNPGFILTGCYDNLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGL------KY 80
V + DG N + G + + +VW G IL GH VS + G+
Sbjct: 276 VFSPDGKN---VAIGSWSGVSKVWSVSGQKKQILAGHSQRVSCIAYHPLSGIDGNHTKNL 332
Query: 81 VTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWD 140
V +AT S D T +LW + N+ + + A+V SI ET + G D
Sbjct: 333 VNIATTSADSTCKLWPLLNNDNNNNNNNNNDNEE-EDNDATV-SI--ETQPILSLEGHSD 388
Query: 141 CTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSV-VWPQQET 199
G ++ + ++ + + G+ + GH+ V + +
Sbjct: 389 VV----NRCSFHPCGRYITTSSNDKSWRLWDLESGGKCLLDQEGHSDGVMGISIQSDGSL 444
Query: 200 IYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSAL-IAAGGSDPILRIWDPRK 258
+ + S D VR WD+ G+ + F G + I + + +A+ D + IWD RK
Sbjct: 445 LATGSQDGLVRIWDLRSGRPIL-YFQGHSKQVISVDWSPNGYQLASSSEDNTVVIWDIRK 503
Query: 259 PGTSAPVFQFSSHNSWISACKWHNKSWF--------------HLISASYDGKVMLWDLRT 304
S Q +HNS +S K+ +S +L + S+DGK+ W T
Sbjct: 504 KEQSC---QILAHNSIVSCVKFQKQSTQTNNNNNNSSPGCVNYLATCSFDGKIKTWSPNT 560
Query: 305 AWPLSVIDSHKDKVLCAD 322
PL+ + H KV D
Sbjct: 561 WSPLATFEGHSSKVTSID 578
>UNIPROTKB|F1M373 [details] [associations]
symbol:Fbxw11 "Protein Fbxw11" species:10116 "Rattus
norvegicus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1309121 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 GO:GO:0045892
GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842
GO:GO:0045862 GO:GO:0000209 GO:GO:0031648 GO:GO:0042347
GO:GO:0031146 GO:GO:0042753 IPI:IPI00870648
Ensembl:ENSRNOT00000006078 ArrayExpress:F1M373 Uniprot:F1M373
Length = 527
Score = 167 (63.8 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 67/288 (23%), Positives = 125/288 (43%)
Query: 38 ILTGCYDNLGRVW-KAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWK 96
I++G DN ++W K+ C +L GH G SV ++ D + T S D T+R+W
Sbjct: 238 IISGLRDNSIKIWDKSSLECLKVLTGHTG---SVLCLQYDER---VIVTGSSDSTVRVWD 291
Query: 97 FDAEELVN----HPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSD 152
+ E++N H + + + G + + +M + + D T+
Sbjct: 292 VNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDM--ASATDITLRRVLVGHR- 348
Query: 153 AAGNQVS-----IKKRKGNNQVEEPQLEG-EAISTLVGHTQCVSSVVWPQQETIYSASWD 206
AA N V I G+ ++ E + TL GH + ++ + + + + S S D
Sbjct: 349 AAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY-RDRLVVSGSSD 407
Query: 207 HSVRTWDVEMGKDLSDIFCGKAL-NCIDIGGEGSALIAAGGSDPILRIWD------PRKP 259
+++R WD+E G L + + L CI + I +G D +++WD PR P
Sbjct: 408 NTIRLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLQAALDPRAP 464
Query: 260 GTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWP 307
++ + H+ + ++ F +IS+S+D +++WD P
Sbjct: 465 ASTLCLRTLVEHSGRVFRLQFDE---FQIISSSHDDTILIWDFLNVPP 509
Score = 142 (55.0 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 40/169 (23%), Positives = 80/169 (47%)
Query: 176 GEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLS--DIFCGK--ALNC 231
GE ++TL+ H + V + + + + S D S+ WD+ D++ + G A+N
Sbjct: 295 GEVLNTLIHHNEAVLHLRF-SNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNV 353
Query: 232 IDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291
+D + +++A G D +++W T V + H I+ ++ ++ ++S
Sbjct: 354 VDF--DDKYIVSASG-DRTIKVWST---STCEFVRTLNGHKRGIACLQYRDRL---VVSG 404
Query: 292 SYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGGVDSKLCV 340
S D + LWD+ L V++ H++ V C + ++SG D K+ V
Sbjct: 405 SSDNTIRLWDIECGACLRVLEGHEELVRCIRF-DNKRIVSGAYDGKIKV 452
>RGD|1308483 [details] [associations]
symbol:Pex7 "peroxisomal biogenesis factor 7" species:10116
"Rattus norvegicus" [GO:0001764 "neuron migration"
evidence=IEA;ISO] [GO:0001958 "endochondral ossification"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005053 "peroxisome matrix targeting signal-2 binding"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005777 "peroxisome" evidence=ISO] [GO:0005782 "peroxisomal
matrix" evidence=IEA;ISO] [GO:0005829 "cytosol" evidence=IEA;ISO]
[GO:0006625 "protein targeting to peroxisome" evidence=ISO]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA;ISO]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008611 "ether lipid
biosynthetic process" evidence=IEA;ISO] [GO:0016558 "protein import
into peroxisome matrix" evidence=IEA;ISO] [GO:0019899 "enzyme
binding" evidence=IEA;ISO] [GO:0042803 "protein homodimerization
activity" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1308483 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 GeneTree:ENSGT00700000104578
OrthoDB:EOG483D4V EMBL:BC100091 IPI:IPI00367874
RefSeq:NP_001029319.1 UniGene:Rn.162402 STRING:Q498S5
Ensembl:ENSRNOT00000016728 GeneID:308718 KEGG:rno:308718
UCSC:RGD:1308483 InParanoid:Q498S5 NextBio:659419
Genevestigator:Q498S5 Uniprot:Q498S5
Length = 318
Score = 135 (52.6 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 36/123 (29%), Positives = 56/123 (45%)
Query: 185 HTQCVSSVVWPQ---QETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEG-SA 240
HTQ V SV W Q ++ + S SWD +V+ WD +G L +++ I
Sbjct: 105 HTQEVYSVDWSQTRDEQLVVSGSWDQTVKVWDPTVGNSLCTFRGHESVIYSTIWSPHIPG 164
Query: 241 LIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLW 300
A+ D LRIWD + G + +H + I +C W + L++ + D + W
Sbjct: 165 CFASASGDQTLRIWDVKTTGVRIVI---PAHQAEILSCDWCKYNENLLVTGAVDCSLRGW 221
Query: 301 DLR 303
DLR
Sbjct: 222 DLR 224
Score = 132 (51.5 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 49/160 (30%), Positives = 69/160 (43%)
Query: 168 QVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIY-SASWDHSVRTWDVEM-G-KDLSDI 223
+V +P + G ++ T GH + S +W P + SAS D ++R WDV+ G + +
Sbjct: 133 KVWDPTV-GNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDVKTTGVRIVIPA 191
Query: 224 FCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNK 283
+ L+C D L+ G D LR WD R PVF+ H I K+
Sbjct: 192 HQAEILSC-DWCKYNENLLVTGAVDCSLRGWDLRN--VRQPVFELLGHTYAIRRVKF--- 245
Query: 284 SWFH---LISASYDGKVMLWDLRTAWPLSVIDSHKDKVLC 320
S FH L S SYD V W+ PL H + C
Sbjct: 246 SPFHASVLASCSYDFTVRFWNFSKPDPLLETVEHHTEFTC 285
Score = 130 (50.8 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 39/156 (25%), Positives = 69/156 (44%)
Query: 192 VVWPQ--QETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSA---LIAAGG 246
V W + + + + S D S++ WD ++ + + L+ +G
Sbjct: 68 VTWSENNEHVLVTCSGDGSLQLWDTAKATGPLQVYKEHTQEVYSVDWSQTRDEQLVVSGS 127
Query: 247 SDPILRIWDPRKPGTSAPVFQFSSHNSWISACKW--HNKSWFHLISASYDGKVMLWDLRT 304
D +++WDP G S F+ H S I + W H F SAS D + +WD++T
Sbjct: 128 WDQTVKVWDPTV-GNSLCTFR--GHESVIYSTIWSPHIPGCF--ASASGDQTLRIWDVKT 182
Query: 305 AWPLSVIDSHKDKVLCADW--WRGDSVISGGVDSKL 338
VI +H+ ++L DW + + +++G VD L
Sbjct: 183 TGVRIVIPAHQAEILSCDWCKYNENLLVTGAVDCSL 218
Score = 72 (30.4 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 75 SDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIA-AETSGN- 132
S+ ++V V T S D +L+LW + K ++ + H V+S+ ++T
Sbjct: 71 SENNEHVLV-TCSGDGSLQLW--------DTAKATGPLQVYKEHTQEVYSVDWSQTRDEQ 121
Query: 133 MVCSGSWDCTISLW 146
+V SGSWD T+ +W
Sbjct: 122 LVVSGSWDQTVKVW 135
>FB|FBgn0039067 [details] [associations]
symbol:wda "will decrease acetylation" species:7227
"Drosophila melanogaster" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043970 "histone H3-K9
acetylation" evidence=IMP] [GO:0000124 "SAGA complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014297 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0000124
GeneTree:ENSGT00700000104377 KO:K03130 HSSP:Q02793 EMBL:AY118904
RefSeq:NP_651136.1 UniGene:Dm.13737 SMR:Q9VCN9 STRING:Q9VCN9
EnsemblMetazoa:FBtr0084387 GeneID:42750 KEGG:dme:Dmel_CG4448
UCSC:CG4448-RA CTD:42750 FlyBase:FBgn0039067 InParanoid:Q9VCN9
OMA:LWCATSG OrthoDB:EOG49W0WQ GenomeRNAi:42750 NextBio:830376
Uniprot:Q9VCN9
Length = 743
Score = 169 (64.5 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 63/217 (29%), Positives = 96/217 (44%)
Query: 115 LRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAG--------------NQVSI 160
LRGH V + ++ S S D T+ WR ++ A + V
Sbjct: 493 LRGHTKGVTDVRFSAHYPLMYSVSKDATMRCWRAHNLHCAAIYRSHNYPIWCLDESPVGQ 552
Query: 161 KKRKGNNQVEEP--QLEGE-AISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEM 216
G+ + LE E A+ GHTQ V V + P I + S DHSVR W
Sbjct: 553 YVVTGSKDLSARLWSLEKEHALIIYAGHTQDVECVAFHPNGNYIATGSADHSVRLWCATS 612
Query: 217 GKDLSDIF--CGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSW 274
GK L +F C +A+ + +G ++AA G + +RI+D A + + H++
Sbjct: 613 GK-LMRVFADCRQAVTQLAFSPDGK-MLAAAGEETKVRIFDL---AAGAQLAELKDHSAS 667
Query: 275 ISACKW--HNKSWFHLISASYDGKVMLWDLRTAWPLS 309
IS+ W HN+ HL +A DG + LWD++ P+S
Sbjct: 668 ISSLSWSTHNR---HLATACSDGTLRLWDIKKLSPMS 701
>MGI|MGI:2144023 [details] [associations]
symbol:Fbxw11 "F-box and WD-40 domain protein 11"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=ISO;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006470
"protein dephosphorylation" evidence=IDA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO;IDA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO;IMP] [GO:0031648 "protein
destabilization" evidence=ISO] [GO:0042347 "negative regulation of
NF-kappaB import into nucleus" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048511 "rhythmic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
MGI:MGI:2144023 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 EMBL:AL669951 GO:GO:0042753
EMBL:AL669844 HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362
OrthoDB:EOG4F1X2M GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AY038079 EMBL:AK041532 EMBL:AK149139 EMBL:AK152181
EMBL:AK160086 EMBL:AK166226 EMBL:AK168667 EMBL:BC034261
IPI:IPI00473301 IPI:IPI00474016 IPI:IPI00515142 IPI:IPI00969335
RefSeq:NP_001258276.1 RefSeq:NP_001258277.1 RefSeq:NP_001258278.1
RefSeq:NP_598776.1 UniGene:Mm.28017 UniGene:Mm.474118
ProteinModelPortal:Q5SRY7 SMR:Q5SRY7 DIP:DIP-59921N STRING:Q5SRY7
PhosphoSite:Q5SRY7 PRIDE:Q5SRY7 Ensembl:ENSMUST00000076383
Ensembl:ENSMUST00000093205 Ensembl:ENSMUST00000109366 GeneID:103583
KEGG:mmu:103583 UCSC:uc007ijx.1 UCSC:uc007ijy.1 UCSC:uc007ijz.1
UCSC:uc007ika.1 InParanoid:Q923H0 ChiTaRS:FBXW11 NextBio:356027
Bgee:Q5SRY7 Genevestigator:Q5SRY7 Uniprot:Q5SRY7
Length = 542
Score = 167 (63.8 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 67/288 (23%), Positives = 125/288 (43%)
Query: 38 ILTGCYDNLGRVW-KAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWK 96
I++G DN ++W K+ C +L GH G SV ++ D + T S D T+R+W
Sbjct: 253 IISGLRDNSIKIWDKSSLECLKVLTGHTG---SVLCLQYDER---VIVTGSSDSTVRVWD 306
Query: 97 FDAEELVN----HPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSD 152
+ E++N H + + + G + + +M + + D T+
Sbjct: 307 VNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDM--ASATDITLRRVLVGHR- 363
Query: 153 AAGNQVS-----IKKRKGNNQVEEPQLEG-EAISTLVGHTQCVSSVVWPQQETIYSASWD 206
AA N V I G+ ++ E + TL GH + ++ + + + + S S D
Sbjct: 364 AAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY-RDRLVVSGSSD 422
Query: 207 HSVRTWDVEMGKDLSDIFCGKAL-NCIDIGGEGSALIAAGGSDPILRIWD------PRKP 259
+++R WD+E G L + + L CI + I +G D +++WD PR P
Sbjct: 423 NTIRLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLQAALDPRAP 479
Query: 260 GTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWP 307
++ + H+ + ++ F +IS+S+D +++WD P
Sbjct: 480 ASTLCLRTLVEHSGRVFRLQFDE---FQIISSSHDDTILIWDFLNVPP 524
Score = 142 (55.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 40/169 (23%), Positives = 80/169 (47%)
Query: 176 GEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLS--DIFCGK--ALNC 231
GE ++TL+ H + V + + + + S D S+ WD+ D++ + G A+N
Sbjct: 310 GEVLNTLIHHNEAVLHLRF-SNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNV 368
Query: 232 IDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291
+D + +++A G D +++W T V + H I+ ++ ++ ++S
Sbjct: 369 VDF--DDKYIVSASG-DRTIKVWST---STCEFVRTLNGHKRGIACLQYRDRL---VVSG 419
Query: 292 SYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGGVDSKLCV 340
S D + LWD+ L V++ H++ V C + ++SG D K+ V
Sbjct: 420 SSDNTIRLWDIECGACLRVLEGHEELVRCIRF-DNKRIVSGAYDGKIKV 467
>UNIPROTKB|O93377 [details] [associations]
symbol:rbbp4-a "Histone-binding protein RBBP4-A"
species:8355 "Xenopus laevis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOVERGEN:HBG053236 EMBL:AF073787
EMBL:BC077257 RefSeq:NP_001083811.1 UniGene:Xl.537
ProteinModelPortal:O93377 SMR:O93377 PRIDE:O93377 GeneID:399131
KEGG:xla:399131 CTD:399131 Xenbase:XB-GENE-482006 Uniprot:O93377
Length = 425
Score = 165 (63.1 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 56/185 (30%), Positives = 78/185 (42%)
Query: 171 EPQLEGEAISTLV--GHTQCVSSVVW-PQQE-TIYSASWDHSVRTWDVEM----GK--DL 220
+P GE L GH + + W P + SAS DH++ WD+ GK D
Sbjct: 160 KPDPSGECNPNLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDA 219
Query: 221 SDIFCGKALNCIDIGGE--GSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISAC 278
IF G D+ +L + D L IWD R TS P +H + ++
Sbjct: 220 KTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCL 279
Query: 279 KWHNKSWFHLISASYDGKVMLWDLRTA-WPLSVIDSHKDKVLCADWWRGDSVI--SGGVD 335
++ S F L + S D V LWDLR L +SHKD++ W + I S G D
Sbjct: 280 SFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTD 339
Query: 336 SKLCV 340
+L V
Sbjct: 340 RRLNV 344
Score = 130 (50.8 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 52/198 (26%), Positives = 85/198 (42%)
Query: 115 LRGHKASVHSIA--AETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEP 172
LRGH+ + ++ SGN++ S S D TI LW +S ++G
Sbjct: 173 LRGHQKEGYGLSWNPNLSGNLL-SASDDHTICLW----------DISAVPKEGK------ 215
Query: 173 QLEGEAISTLVGHTQCVSSVVWPQ-QETIY-SASWDHSVRTWDVEMG---KDLSDIFCGK 227
++ + I T GHT V V W E+++ S + D + WD K +
Sbjct: 216 VVDAKTIFT--GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHT 273
Query: 228 A-LNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKW--HNKS 284
A +NC+ ++A G +D + +WD R + F SH I +W HN++
Sbjct: 274 AEVNCLSFNPYSEFILATGSADKTVALWDLRN--LKLKLHSFESHKDEIFQVQWSPHNET 331
Query: 285 WFHLISASYDGKVMLWDL 302
L S+ D ++ +WDL
Sbjct: 332 I--LASSGTDRRLNVWDL 347
>UNIPROTKB|J9P544 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:J9P544 Ensembl:ENSCAFT00000045166 Uniprot:J9P544
Length = 510
Score = 166 (63.5 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 67/288 (23%), Positives = 124/288 (43%)
Query: 38 ILTGCYDNLGRVW-KAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWK 96
I++G DN ++W K C +L GH G SV ++ D + T S D T+R+W
Sbjct: 221 IISGLRDNSIKIWDKTSLECLKVLTGHTG---SVLCLQYDER---VIVTGSSDSTVRVWD 274
Query: 97 FDAEELVN----HPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSD 152
+ E++N H + + + G + + +M + + D T+
Sbjct: 275 VNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDM--ASATDITLRRVLVGHR- 331
Query: 153 AAGNQVS-----IKKRKGNNQVEEPQLEG-EAISTLVGHTQCVSSVVWPQQETIYSASWD 206
AA N V I G+ ++ E + TL GH + ++ + + + + S S D
Sbjct: 332 AAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY-RDRLVVSGSSD 390
Query: 207 HSVRTWDVEMGKDLSDIFCGKAL-NCIDIGGEGSALIAAGGSDPILRIWD------PRKP 259
+++R WD+E G L + + L CI + I +G D +++WD PR P
Sbjct: 391 NTIRLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLQAALDPRAP 447
Query: 260 GTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWP 307
++ + H+ + ++ F +IS+S+D +++WD P
Sbjct: 448 ASTLCLRTLVEHSGRVFRLQFDE---FQIISSSHDDTILIWDFLNVPP 492
Score = 145 (56.1 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 64/278 (23%), Positives = 118/278 (42%)
Query: 50 WKAGGVCTHILEG-HCGAVSSVNI--IKSDGLKYVTVATASKDQTLRLWKFDAEELVNHP 106
W+ G H L+ C + +S + ++ D K ++ +D ++++W D L
Sbjct: 191 WRCG---RHNLQRIQCRSENSKGVYCLQYDDEKIIS---GLRDNSIKIW--DKTSL---- 238
Query: 107 KKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAG-----NQVSIK 161
K+L GH SV + + ++ +GS D T+ +W N + N+ +
Sbjct: 239 ---ECLKVLTGHTGSV--LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLH 293
Query: 162 KRKGNNQVEEPQLEGE------AIST-------LVGHTQCVSSVVWPQQETIYSASWDHS 208
R N + + A +T LVGH V+ V + + I SAS D +
Sbjct: 294 LRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF-DDKYIVSASGDRT 352
Query: 209 VRTWDVEMGKDLSDIFCGK-ALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQ 267
++ W + + + K + C+ L+ +G SD +R+WD + G V +
Sbjct: 353 IKVWSTSTCEFVRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDI-ECGACLRVLE 408
Query: 268 FSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTA 305
H + ++ NK ++S +YDGK+ +WDL+ A
Sbjct: 409 --GHEELVRCIRFDNK---RIVSGAYDGKIKVWDLQAA 441
Score = 142 (55.0 bits), Expect = 9.7e-07, P = 9.7e-07
Identities = 40/169 (23%), Positives = 80/169 (47%)
Query: 176 GEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLS--DIFCGK--ALNC 231
GE ++TL+ H + V + + + + S D S+ WD+ D++ + G A+N
Sbjct: 278 GEVLNTLIHHNEAVLHLRF-SNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNV 336
Query: 232 IDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291
+D + +++A G D +++W T V + H I+ ++ ++ ++S
Sbjct: 337 VDF--DDKYIVSASG-DRTIKVWST---STCEFVRTLNGHKRGIACLQYRDRL---VVSG 387
Query: 292 SYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGGVDSKLCV 340
S D + LWD+ L V++ H++ V C + ++SG D K+ V
Sbjct: 388 SSDNTIRLWDIECGACLRVLEGHEELVRCIRF-DNKRIVSGAYDGKIKV 435
>UNIPROTKB|B4DH70 [details] [associations]
symbol:FBXW11 "cDNA FLJ54601, highly similar to F-box/WD
repeat protein 11" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AC011410 HOGENOM:HOG000006638
HOVERGEN:HBG002521 OrthoDB:EOG4F1X2M UniGene:Hs.484138
HGNC:HGNC:13607 EMBL:AC011387 EMBL:AC113342 EMBL:AK294956
IPI:IPI01013614 SMR:B4DH70 STRING:B4DH70 Ensembl:ENST00000425623
UCSC:uc011dey.1 Uniprot:B4DH70
Length = 510
Score = 166 (63.5 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 67/288 (23%), Positives = 124/288 (43%)
Query: 38 ILTGCYDNLGRVW-KAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWK 96
I++G DN ++W K C +L GH G SV ++ D + T S D T+R+W
Sbjct: 221 IISGLRDNSIKIWDKTSLECLKVLTGHTG---SVLCLQYDER---VIVTGSSDSTVRVWD 274
Query: 97 FDAEELVN----HPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSD 152
+ E++N H + + + G + + +M + + D T+
Sbjct: 275 VNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDM--ASATDITLRRVLVGHR- 331
Query: 153 AAGNQVS-----IKKRKGNNQVEEPQLEG-EAISTLVGHTQCVSSVVWPQQETIYSASWD 206
AA N V I G+ ++ E + TL GH + ++ + + + + S S D
Sbjct: 332 AAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY-RDRLVVSGSSD 390
Query: 207 HSVRTWDVEMGKDLSDIFCGKAL-NCIDIGGEGSALIAAGGSDPILRIWD------PRKP 259
+++R WD+E G L + + L CI + I +G D +++WD PR P
Sbjct: 391 NTIRLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLQAALDPRAP 447
Query: 260 GTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWP 307
++ + H+ + ++ F +IS+S+D +++WD P
Sbjct: 448 ASTLCLRTLVEHSGRVFRLQFDE---FQIISSSHDDTILIWDFLNVPP 492
Score = 145 (56.1 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 64/278 (23%), Positives = 118/278 (42%)
Query: 50 WKAGGVCTHILEG-HCGAVSSVNI--IKSDGLKYVTVATASKDQTLRLWKFDAEELVNHP 106
W+ G H L+ C + +S + ++ D K ++ +D ++++W D L
Sbjct: 191 WRCG---RHNLQRIQCRSENSKGVYCLQYDDEKIIS---GLRDNSIKIW--DKTSL---- 238
Query: 107 KKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAG-----NQVSIK 161
K+L GH SV + + ++ +GS D T+ +W N + N+ +
Sbjct: 239 ---ECLKVLTGHTGSV--LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLH 293
Query: 162 KRKGNNQVEEPQLEGE------AIST-------LVGHTQCVSSVVWPQQETIYSASWDHS 208
R N + + A +T LVGH V+ V + + I SAS D +
Sbjct: 294 LRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF-DDKYIVSASGDRT 352
Query: 209 VRTWDVEMGKDLSDIFCGK-ALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQ 267
++ W + + + K + C+ L+ +G SD +R+WD + G V +
Sbjct: 353 IKVWSTSTCEFVRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDI-ECGACLRVLE 408
Query: 268 FSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTA 305
H + ++ NK ++S +YDGK+ +WDL+ A
Sbjct: 409 --GHEELVRCIRFDNK---RIVSGAYDGKIKVWDLQAA 441
Score = 142 (55.0 bits), Expect = 9.7e-07, P = 9.7e-07
Identities = 40/169 (23%), Positives = 80/169 (47%)
Query: 176 GEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLS--DIFCGK--ALNC 231
GE ++TL+ H + V + + + + S D S+ WD+ D++ + G A+N
Sbjct: 278 GEVLNTLIHHNEAVLHLRF-SNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNV 336
Query: 232 IDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291
+D + +++A G D +++W T V + H I+ ++ ++ ++S
Sbjct: 337 VDF--DDKYIVSASG-DRTIKVWST---STCEFVRTLNGHKRGIACLQYRDRL---VVSG 387
Query: 292 SYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGGVDSKLCV 340
S D + LWD+ L V++ H++ V C + ++SG D K+ V
Sbjct: 388 SSDNTIRLWDIECGACLRVLEGHEELVRCIRF-DNKRIVSGAYDGKIKV 435
>UNIPROTKB|E2RTE4 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:E2RTE4 Ensembl:ENSCAFT00000026749 Uniprot:E2RTE4
Length = 529
Score = 166 (63.5 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 67/288 (23%), Positives = 124/288 (43%)
Query: 38 ILTGCYDNLGRVW-KAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWK 96
I++G DN ++W K C +L GH G SV ++ D + T S D T+R+W
Sbjct: 240 IISGLRDNSIKIWDKTSLECLKVLTGHTG---SVLCLQYDER---VIVTGSSDSTVRVWD 293
Query: 97 FDAEELVN----HPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSD 152
+ E++N H + + + G + + +M + + D T+
Sbjct: 294 VNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDM--ASATDITLRRVLVGHR- 350
Query: 153 AAGNQVS-----IKKRKGNNQVEEPQLEG-EAISTLVGHTQCVSSVVWPQQETIYSASWD 206
AA N V I G+ ++ E + TL GH + ++ + + + + S S D
Sbjct: 351 AAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY-RDRLVVSGSSD 409
Query: 207 HSVRTWDVEMGKDLSDIFCGKAL-NCIDIGGEGSALIAAGGSDPILRIWD------PRKP 259
+++R WD+E G L + + L CI + I +G D +++WD PR P
Sbjct: 410 NTIRLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLQAALDPRAP 466
Query: 260 GTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWP 307
++ + H+ + ++ F +IS+S+D +++WD P
Sbjct: 467 ASTLCLRTLVEHSGRVFRLQFDE---FQIISSSHDDTILIWDFLNVPP 511
Score = 145 (56.1 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 64/278 (23%), Positives = 118/278 (42%)
Query: 50 WKAGGVCTHILEG-HCGAVSSVNI--IKSDGLKYVTVATASKDQTLRLWKFDAEELVNHP 106
W+ G H L+ C + +S + ++ D K ++ +D ++++W D L
Sbjct: 210 WRCG---RHNLQRIQCRSENSKGVYCLQYDDEKIIS---GLRDNSIKIW--DKTSL---- 257
Query: 107 KKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAG-----NQVSIK 161
K+L GH SV + + ++ +GS D T+ +W N + N+ +
Sbjct: 258 ---ECLKVLTGHTGSV--LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLH 312
Query: 162 KRKGNNQVEEPQLEGE------AIST-------LVGHTQCVSSVVWPQQETIYSASWDHS 208
R N + + A +T LVGH V+ V + + I SAS D +
Sbjct: 313 LRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF-DDKYIVSASGDRT 371
Query: 209 VRTWDVEMGKDLSDIFCGK-ALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQ 267
++ W + + + K + C+ L+ +G SD +R+WD + G V +
Sbjct: 372 IKVWSTSTCEFVRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDI-ECGACLRVLE 427
Query: 268 FSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTA 305
H + ++ NK ++S +YDGK+ +WDL+ A
Sbjct: 428 --GHEELVRCIRFDNK---RIVSGAYDGKIKVWDLQAA 460
Score = 142 (55.0 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 40/169 (23%), Positives = 80/169 (47%)
Query: 176 GEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLS--DIFCGK--ALNC 231
GE ++TL+ H + V + + + + S D S+ WD+ D++ + G A+N
Sbjct: 297 GEVLNTLIHHNEAVLHLRF-SNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNV 355
Query: 232 IDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291
+D + +++A G D +++W T V + H I+ ++ ++ ++S
Sbjct: 356 VDF--DDKYIVSASG-DRTIKVWST---STCEFVRTLNGHKRGIACLQYRDRL---VVSG 406
Query: 292 SYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGGVDSKLCV 340
S D + LWD+ L V++ H++ V C + ++SG D K+ V
Sbjct: 407 SSDNTIRLWDIECGACLRVLEGHEELVRCIRF-DNKRIVSGAYDGKIKV 454
>UNIPROTKB|F1MLG0 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045862 "positive
regulation of proteolysis" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0031648 "protein destabilization" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:DAAA02049882
EMBL:DAAA02049883 IPI:IPI00699126 Ensembl:ENSBTAT00000061118
Uniprot:F1MLG0
Length = 530
Score = 166 (63.5 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 67/288 (23%), Positives = 124/288 (43%)
Query: 38 ILTGCYDNLGRVW-KAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWK 96
I++G DN ++W K C +L GH G SV ++ D + T S D T+R+W
Sbjct: 241 IISGLRDNSIKIWDKTSLECLKVLTGHTG---SVLCLQYDER---VIVTGSSDSTVRVWD 294
Query: 97 FDAEELVN----HPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSD 152
+ E++N H + + + G + + +M + + D T+
Sbjct: 295 VNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDM--ASATDITLRRVLVGHR- 351
Query: 153 AAGNQVS-----IKKRKGNNQVEEPQLEG-EAISTLVGHTQCVSSVVWPQQETIYSASWD 206
AA N V I G+ ++ E + TL GH + ++ + + + + S S D
Sbjct: 352 AAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY-RDRLVVSGSSD 410
Query: 207 HSVRTWDVEMGKDLSDIFCGKAL-NCIDIGGEGSALIAAGGSDPILRIWD------PRKP 259
+++R WD+E G L + + L CI + I +G D +++WD PR P
Sbjct: 411 NTIRLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLQAALDPRAP 467
Query: 260 GTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWP 307
++ + H+ + ++ F +IS+S+D +++WD P
Sbjct: 468 ASTLCLRTLVEHSGRVFRLQFDE---FQIISSSHDDTILIWDFLNVPP 512
Score = 145 (56.1 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 64/278 (23%), Positives = 118/278 (42%)
Query: 50 WKAGGVCTHILEG-HCGAVSSVNI--IKSDGLKYVTVATASKDQTLRLWKFDAEELVNHP 106
W+ G H L+ C + +S + ++ D K ++ +D ++++W D L
Sbjct: 211 WRCG---RHNLQRIQCRSENSKGVYCLQYDDEKIIS---GLRDNSIKIW--DKTSL---- 258
Query: 107 KKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAG-----NQVSIK 161
K+L GH SV + + ++ +GS D T+ +W N + N+ +
Sbjct: 259 ---ECLKVLTGHTGSV--LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLH 313
Query: 162 KRKGNNQVEEPQLEGE------AIST-------LVGHTQCVSSVVWPQQETIYSASWDHS 208
R N + + A +T LVGH V+ V + + I SAS D +
Sbjct: 314 LRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF-DDKYIVSASGDRT 372
Query: 209 VRTWDVEMGKDLSDIFCGK-ALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQ 267
++ W + + + K + C+ L+ +G SD +R+WD + G V +
Sbjct: 373 IKVWSTSTCEFVRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDI-ECGACLRVLE 428
Query: 268 FSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTA 305
H + ++ NK ++S +YDGK+ +WDL+ A
Sbjct: 429 --GHEELVRCIRFDNK---RIVSGAYDGKIKVWDLQAA 461
Score = 142 (55.0 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 40/169 (23%), Positives = 80/169 (47%)
Query: 176 GEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLS--DIFCGK--ALNC 231
GE ++TL+ H + V + + + + S D S+ WD+ D++ + G A+N
Sbjct: 298 GEVLNTLIHHNEAVLHLRF-SNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNV 356
Query: 232 IDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291
+D + +++A G D +++W T V + H I+ ++ ++ ++S
Sbjct: 357 VDF--DDKYIVSASG-DRTIKVWST---STCEFVRTLNGHKRGIACLQYRDRL---VVSG 407
Query: 292 SYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGGVDSKLCV 340
S D + LWD+ L V++ H++ V C + ++SG D K+ V
Sbjct: 408 SSDNTIRLWDIECGACLRVLEGHEELVRCIRF-DNKRIVSGAYDGKIKV 455
>UNIPROTKB|F1PBF1 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 KO:K03362 GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AAEX03003014 RefSeq:XP_866627.1
ProteinModelPortal:F1PBF1 Ensembl:ENSCAFT00000026752 GeneID:479291
KEGG:cfa:479291 Uniprot:F1PBF1
Length = 542
Score = 166 (63.5 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 67/288 (23%), Positives = 124/288 (43%)
Query: 38 ILTGCYDNLGRVW-KAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWK 96
I++G DN ++W K C +L GH G SV ++ D + T S D T+R+W
Sbjct: 253 IISGLRDNSIKIWDKTSLECLKVLTGHTG---SVLCLQYDER---VIVTGSSDSTVRVWD 306
Query: 97 FDAEELVN----HPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSD 152
+ E++N H + + + G + + +M + + D T+
Sbjct: 307 VNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDM--ASATDITLRRVLVGHR- 363
Query: 153 AAGNQVS-----IKKRKGNNQVEEPQLEG-EAISTLVGHTQCVSSVVWPQQETIYSASWD 206
AA N V I G+ ++ E + TL GH + ++ + + + + S S D
Sbjct: 364 AAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY-RDRLVVSGSSD 422
Query: 207 HSVRTWDVEMGKDLSDIFCGKAL-NCIDIGGEGSALIAAGGSDPILRIWD------PRKP 259
+++R WD+E G L + + L CI + I +G D +++WD PR P
Sbjct: 423 NTIRLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLQAALDPRAP 479
Query: 260 GTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWP 307
++ + H+ + ++ F +IS+S+D +++WD P
Sbjct: 480 ASTLCLRTLVEHSGRVFRLQFDE---FQIISSSHDDTILIWDFLNVPP 524
Score = 145 (56.1 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 64/278 (23%), Positives = 118/278 (42%)
Query: 50 WKAGGVCTHILEG-HCGAVSSVNI--IKSDGLKYVTVATASKDQTLRLWKFDAEELVNHP 106
W+ G H L+ C + +S + ++ D K ++ +D ++++W D L
Sbjct: 223 WRCG---RHNLQRIQCRSENSKGVYCLQYDDEKIIS---GLRDNSIKIW--DKTSL---- 270
Query: 107 KKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAG-----NQVSIK 161
K+L GH SV + + ++ +GS D T+ +W N + N+ +
Sbjct: 271 ---ECLKVLTGHTGSV--LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLH 325
Query: 162 KRKGNNQVEEPQLEGE------AIST-------LVGHTQCVSSVVWPQQETIYSASWDHS 208
R N + + A +T LVGH V+ V + + I SAS D +
Sbjct: 326 LRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF-DDKYIVSASGDRT 384
Query: 209 VRTWDVEMGKDLSDIFCGK-ALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQ 267
++ W + + + K + C+ L+ +G SD +R+WD + G V +
Sbjct: 385 IKVWSTSTCEFVRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDI-ECGACLRVLE 440
Query: 268 FSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTA 305
H + ++ NK ++S +YDGK+ +WDL+ A
Sbjct: 441 --GHEELVRCIRFDNK---RIVSGAYDGKIKVWDLQAA 473
Score = 142 (55.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 40/169 (23%), Positives = 80/169 (47%)
Query: 176 GEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLS--DIFCGK--ALNC 231
GE ++TL+ H + V + + + + S D S+ WD+ D++ + G A+N
Sbjct: 310 GEVLNTLIHHNEAVLHLRF-SNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNV 368
Query: 232 IDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291
+D + +++A G D +++W T V + H I+ ++ ++ ++S
Sbjct: 369 VDF--DDKYIVSASG-DRTIKVWST---STCEFVRTLNGHKRGIACLQYRDRL---VVSG 419
Query: 292 SYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGGVDSKLCV 340
S D + LWD+ L V++ H++ V C + ++SG D K+ V
Sbjct: 420 SSDNTIRLWDIECGACLRVLEGHEELVRCIRF-DNKRIVSGAYDGKIKV 467
>UNIPROTKB|Q9UKB1 [details] [associations]
symbol:FBXW11 "F-box/WD repeat-containing protein 11"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=NAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;NAS] [GO:0016567
"protein ubiquitination" evidence=IDA;NAS] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IDA] [GO:0006470 "protein
dephosphorylation" evidence=ISS] [GO:0042753 "positive regulation
of circadian rhythm" evidence=ISS] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0031648 "protein destabilization"
evidence=IMP] [GO:0045862 "positive regulation of proteolysis"
evidence=IMP] [GO:0005813 "centrosome" evidence=IDA] [GO:0005829
"cytosol" evidence=ISS;TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 Reactome:REACT_6900
GO:GO:0045892 GO:GO:0045893
Pathway_Interaction_DB:wnt_canonical_pathway
Pathway_Interaction_DB:ps1pathway GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862
Pathway_Interaction_DB:hedgehog_glipathway GO:GO:0000209
Pathway_Interaction_DB:hdac_classi_pathway
Pathway_Interaction_DB:nfkappabatypicalpathway
Pathway_Interaction_DB:nfkappabcanonicalpathway GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753 HOGENOM:HOG000006638
HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M EMBL:AF176022
EMBL:AB033279 EMBL:AB033280 EMBL:AB033281 EMBL:AB014596
EMBL:AK314999 EMBL:BC026213 IPI:IPI00301283 IPI:IPI00306671
IPI:IPI00328796 RefSeq:NP_036432.2 RefSeq:NP_387448.2
RefSeq:NP_387449.2 UniGene:Hs.484138 ProteinModelPortal:Q9UKB1
SMR:Q9UKB1 DIP:DIP-27593N IntAct:Q9UKB1 MINT:MINT-120522
STRING:Q9UKB1 PhosphoSite:Q9UKB1 DMDM:13124267 PRIDE:Q9UKB1
DNASU:23291 Ensembl:ENST00000265094 Ensembl:ENST00000296933
Ensembl:ENST00000393802 GeneID:23291 KEGG:hsa:23291 UCSC:uc003mbl.1
UCSC:uc003mbm.1 UCSC:uc003mbn.1 CTD:23291 GeneCards:GC05M171288
HGNC:HGNC:13607 MIM:605651 neXtProt:NX_Q9UKB1 PharmGKB:PA28050
InParanoid:Q9UKB1 OMA:FDQWSEA PhylomeDB:Q9UKB1
Pathway_Interaction_DB:nfkappabalternativepathway GenomeRNAi:23291
NextBio:45108 ArrayExpress:Q9UKB1 Bgee:Q9UKB1 CleanEx:HS_FBXW11
Genevestigator:Q9UKB1 GermOnline:ENSG00000072803 Uniprot:Q9UKB1
Length = 542
Score = 166 (63.5 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 67/288 (23%), Positives = 124/288 (43%)
Query: 38 ILTGCYDNLGRVW-KAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWK 96
I++G DN ++W K C +L GH G SV ++ D + T S D T+R+W
Sbjct: 253 IISGLRDNSIKIWDKTSLECLKVLTGHTG---SVLCLQYDER---VIVTGSSDSTVRVWD 306
Query: 97 FDAEELVN----HPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSD 152
+ E++N H + + + G + + +M + + D T+
Sbjct: 307 VNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDM--ASATDITLRRVLVGHR- 363
Query: 153 AAGNQVS-----IKKRKGNNQVEEPQLEG-EAISTLVGHTQCVSSVVWPQQETIYSASWD 206
AA N V I G+ ++ E + TL GH + ++ + + + + S S D
Sbjct: 364 AAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY-RDRLVVSGSSD 422
Query: 207 HSVRTWDVEMGKDLSDIFCGKAL-NCIDIGGEGSALIAAGGSDPILRIWD------PRKP 259
+++R WD+E G L + + L CI + I +G D +++WD PR P
Sbjct: 423 NTIRLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLQAALDPRAP 479
Query: 260 GTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWP 307
++ + H+ + ++ F +IS+S+D +++WD P
Sbjct: 480 ASTLCLRTLVEHSGRVFRLQFDE---FQIISSSHDDTILIWDFLNVPP 524
Score = 145 (56.1 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 64/278 (23%), Positives = 118/278 (42%)
Query: 50 WKAGGVCTHILEG-HCGAVSSVNI--IKSDGLKYVTVATASKDQTLRLWKFDAEELVNHP 106
W+ G H L+ C + +S + ++ D K ++ +D ++++W D L
Sbjct: 223 WRCG---RHNLQRIQCRSENSKGVYCLQYDDEKIIS---GLRDNSIKIW--DKTSL---- 270
Query: 107 KKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAG-----NQVSIK 161
K+L GH SV + + ++ +GS D T+ +W N + N+ +
Sbjct: 271 ---ECLKVLTGHTGSV--LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLH 325
Query: 162 KRKGNNQVEEPQLEGE------AIST-------LVGHTQCVSSVVWPQQETIYSASWDHS 208
R N + + A +T LVGH V+ V + + I SAS D +
Sbjct: 326 LRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF-DDKYIVSASGDRT 384
Query: 209 VRTWDVEMGKDLSDIFCGK-ALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQ 267
++ W + + + K + C+ L+ +G SD +R+WD + G V +
Sbjct: 385 IKVWSTSTCEFVRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDI-ECGACLRVLE 440
Query: 268 FSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTA 305
H + ++ NK ++S +YDGK+ +WDL+ A
Sbjct: 441 --GHEELVRCIRFDNK---RIVSGAYDGKIKVWDLQAA 473
Score = 142 (55.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 40/169 (23%), Positives = 80/169 (47%)
Query: 176 GEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLS--DIFCGK--ALNC 231
GE ++TL+ H + V + + + + S D S+ WD+ D++ + G A+N
Sbjct: 310 GEVLNTLIHHNEAVLHLRF-SNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNV 368
Query: 232 IDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291
+D + +++A G D +++W T V + H I+ ++ ++ ++S
Sbjct: 369 VDF--DDKYIVSASG-DRTIKVWST---STCEFVRTLNGHKRGIACLQYRDRL---VVSG 419
Query: 292 SYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGGVDSKLCV 340
S D + LWD+ L V++ H++ V C + ++SG D K+ V
Sbjct: 420 SSDNTIRLWDIECGACLRVLEGHEELVRCIRF-DNKRIVSGAYDGKIKV 467
>UNIPROTKB|Q5M7K4 [details] [associations]
symbol:rbbp4 "Histone-binding protein RBBP4" species:8364
"Xenopus (Silurana) tropicalis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0016568 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0033186 InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:BC088588 UniGene:Str.6093
ProteinModelPortal:Q5M7K4 SMR:Q5M7K4 STRING:Q5M7K4
Xenbase:XB-GENE-482002 InParanoid:Q5M7K4 Uniprot:Q5M7K4
Length = 425
Score = 164 (62.8 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 53/172 (30%), Positives = 74/172 (43%)
Query: 182 LVGHTQCVSSVVW-PQQE-TIYSASWDHSVRTWDVEM----GK--DLSDIFCGKALNCID 233
L GH + + W P + SAS DH++ WD+ GK D IF G D
Sbjct: 173 LRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVED 232
Query: 234 IGGE--GSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291
+ +L + D L IWD R TS P +H + ++ ++ S F L +
Sbjct: 233 VSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATG 292
Query: 292 SYDGKVMLWDLRTA-WPLSVIDSHKDKVLCADWWRGDSVI--SGGVDSKLCV 340
S D V LWDLR L +SHKD++ W + I S G D +L V
Sbjct: 293 SADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNV 344
Score = 130 (50.8 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 52/198 (26%), Positives = 85/198 (42%)
Query: 115 LRGHKASVHSIA--AETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEP 172
LRGH+ + ++ SGN++ S S D TI LW +S ++G
Sbjct: 173 LRGHQKEGYGLSWNPNLSGNLL-SASDDHTICLW----------DISAVPKEGK------ 215
Query: 173 QLEGEAISTLVGHTQCVSSVVWPQ-QETIY-SASWDHSVRTWDVEMG---KDLSDIFCGK 227
++ + I T GHT V V W E+++ S + D + WD K +
Sbjct: 216 VVDAKTIFT--GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHT 273
Query: 228 A-LNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKW--HNKS 284
A +NC+ ++A G +D + +WD R + F SH I +W HN++
Sbjct: 274 AEVNCLSFNPYSEFILATGSADKTVALWDLRN--LKLKLHSFESHKDEIFQVQWSPHNET 331
Query: 285 WFHLISASYDGKVMLWDL 302
L S+ D ++ +WDL
Sbjct: 332 I--LASSGTDRRLNVWDL 347
>UNIPROTKB|Q6INH0 [details] [associations]
symbol:rbbp4-b "Histone-binding protein RBBP4-B"
species:8355 "Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0031497
"chromatin assembly" evidence=ISS] [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0006338 GO:GO:0007049 GO:GO:0035098
GO:GO:0031497 GO:GO:0033186 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 EMBL:BC072311 RefSeq:NP_001085185.1
UniGene:Xl.86906 ProteinModelPortal:Q6INH0 SMR:Q6INH0 PRIDE:Q6INH0
DNASU:432269 GeneID:432269 KEGG:xla:432269 CTD:432269
Xenbase:XB-GENE-6255728 Uniprot:Q6INH0
Length = 425
Score = 164 (62.8 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 53/172 (30%), Positives = 74/172 (43%)
Query: 182 LVGHTQCVSSVVW-PQQE-TIYSASWDHSVRTWDVEM----GK--DLSDIFCGKALNCID 233
L GH + + W P + SAS DH++ WD+ GK D IF G D
Sbjct: 173 LRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVED 232
Query: 234 IGGE--GSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291
+ +L + D L IWD R TS P +H + ++ ++ S F L +
Sbjct: 233 VSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATG 292
Query: 292 SYDGKVMLWDLRTA-WPLSVIDSHKDKVLCADWWRGDSVI--SGGVDSKLCV 340
S D V LWDLR L +SHKD++ W + I S G D +L V
Sbjct: 293 SADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNV 344
Score = 130 (50.8 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 52/198 (26%), Positives = 85/198 (42%)
Query: 115 LRGHKASVHSIA--AETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEP 172
LRGH+ + ++ SGN++ S S D TI LW +S ++G
Sbjct: 173 LRGHQKEGYGLSWNPNLSGNLL-SASDDHTICLW----------DISAVPKEGK------ 215
Query: 173 QLEGEAISTLVGHTQCVSSVVWPQ-QETIY-SASWDHSVRTWDVEMG---KDLSDIFCGK 227
++ + I T GHT V V W E+++ S + D + WD K +
Sbjct: 216 VVDAKTIFT--GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHT 273
Query: 228 A-LNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKW--HNKS 284
A +NC+ ++A G +D + +WD R + F SH I +W HN++
Sbjct: 274 AEVNCLSFNPYSEFILATGSADKTVALWDLRN--LKLKLHSFESHKDEIFQVQWSPHNET 331
Query: 285 WFHLISASYDGKVMLWDL 302
L S+ D ++ +WDL
Sbjct: 332 I--LASSGTDRRLNVWDL 347
>ZFIN|ZDB-GENE-030131-848 [details] [associations]
symbol:rbb4l "retinoblastoma binding protein 4,
like" species:7955 "Danio rerio" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-030131-848 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOGENOM:HOG000160330 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC052110 EMBL:BC067546 IPI:IPI00996854
RefSeq:NP_997775.1 UniGene:Dr.75908 ProteinModelPortal:Q7ZTY4
SMR:Q7ZTY4 STRING:Q7ZTY4 PRIDE:Q7ZTY4 Ensembl:ENSDART00000008144
GeneID:322129 KEGG:dre:322129 CTD:322129 NextBio:20807686
ArrayExpress:Q7ZTY4 Bgee:Q7ZTY4 Uniprot:Q7ZTY4
Length = 426
Score = 164 (62.8 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 53/172 (30%), Positives = 75/172 (43%)
Query: 182 LVGHTQCVSSVVW-PQQE-TIYSASWDHSVRTWDV----EMGK--DLSDIFCGKALNCID 233
L GH + + W P + SAS DH++ WD+ + GK D IF G D
Sbjct: 173 LRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISGAPKEGKIVDAKTIFTGHTAVVED 232
Query: 234 IGGE--GSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291
+ +L + D L IWD R TS P +H + ++ ++ S F L +
Sbjct: 233 VSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATG 292
Query: 292 SYDGKVMLWDLRTA-WPLSVIDSHKDKVLCADWWRGDSVI--SGGVDSKLCV 340
S D V LWDLR L +SHKD++ W + I S G D +L V
Sbjct: 293 SADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNV 344
Score = 129 (50.5 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 53/198 (26%), Positives = 82/198 (41%)
Query: 115 LRGHKASVHSIA--AETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEP 172
LRGH+ + ++ SGN++ S S D TI LW + + G V K
Sbjct: 173 LRGHQKEGYGLSWNPNLSGNLL-SASDDHTICLWDISGAPKEGKIVDAK----------- 220
Query: 173 QLEGEAISTLVGHTQCVSSVVWPQ-QETIY-SASWDHSVRTWDVEMG---KDLSDIFCGK 227
I T GHT V V W E+++ S + D + WD K +
Sbjct: 221 -----TIFT--GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHT 273
Query: 228 A-LNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKW--HNKS 284
A +NC+ ++A G +D + +WD R + F SH I +W HN++
Sbjct: 274 AEVNCLSFNPYSEFILATGSADKTVALWDLRN--LKLKLHSFESHKDEIFQVQWSPHNET 331
Query: 285 WFHLISASYDGKVMLWDL 302
L S+ D ++ +WDL
Sbjct: 332 I--LASSGTDRRLNVWDL 347
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 162 (62.1 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 68/298 (22%), Positives = 123/298 (41%)
Query: 48 RVWK-AGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHP 106
+VW G L+GH +V ++ S L +A+ S D T++LW F E +
Sbjct: 68 KVWDYETGDFERTLKGHTDSVQDISFDHSGKL----LASCSADMTIKLWDFQGFECI--- 120
Query: 107 KKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGN 166
+ + GH +V S+A +G+ + S S D TI +W + R+
Sbjct: 121 ------RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCV--KTFTGHREWV 172
Query: 167 NQVEEPQLEGEAISTLVGHTQCVSS-VVWPQQETIYSASWDHSVR--TWDVEMGKDLSDI 223
V P +G I++ + Q V VV ++ +H V +W E S I
Sbjct: 173 RMVR-PNQDGTLIASC-SNDQTVRVWVVATKECKAELREHEHVVECISWAPE--SSYSSI 228
Query: 224 FCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNK 283
G G L++ G D +++WD T + H++W+ +H+
Sbjct: 229 SEATGSETKKSGKPGPFLLS-GSRDKTIKMWDV---STGMCLMTLVGHDNWVRGVLFHSG 284
Query: 284 SWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKLCV 340
F ++S + D + +WD + + +++H+ V D+ + V++G VD + V
Sbjct: 285 GKF-ILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 341
Score = 121 (47.7 bits), Expect = 0.00011, P = 0.00011
Identities = 41/160 (25%), Positives = 75/160 (46%)
Query: 161 KKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKD 219
+KR + P E A+S GH V+ V++ P + SAS D +++ WD E G D
Sbjct: 22 QKRDPKEWIPRPP-EKYALS---GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-D 76
Query: 220 LSDIFCGKALNCIDIGGEGSA-LIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISAC 278
G + DI + S L+A+ +D +++WD + G + H+ +S+
Sbjct: 77 FERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ--GFEC-IRTMHGHDHNVSSV 133
Query: 279 KWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKV 318
H++SAS D + +W+++T + + H++ V
Sbjct: 134 AIMPNG-DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWV 172
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 166 (63.5 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 47/158 (29%), Positives = 76/158 (48%)
Query: 179 ISTLVGHTQCVSSV-VWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNC-IDIGG 236
I +L GHT V SV + +E I + S S+R WD+E K L + KA C +D
Sbjct: 56 IMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHP 115
Query: 237 EGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWH-NKSWFHLISASYDG 295
G +A+G D +++WD R+ G VF++ H+ + ++ + W L SA+ D
Sbjct: 116 YGE-FVASGSQDTNIKLWDIRRKGC---VFRYRGHSQAVRCLRFSPDGKW--LASAADDH 169
Query: 296 KVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGG 333
V LWDL +S H V ++ + +++ G
Sbjct: 170 TVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASG 207
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 164 (62.8 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 84/342 (24%), Positives = 141/342 (41%)
Query: 23 HDDWVSAVDGSNPGFIL-TGCYDNLGRVW--KAGGVCTHILEGHCGAVSSVN---IIKSD 76
H WV ++ S G L +GC + +W G +L GH ++ ++ + +
Sbjct: 106 HRHWVLSISWSPDGKTLASGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHANP 165
Query: 77 GLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCS 136
+Y+ A++SKD ++R+W A R +IL GH SV + G ++ S
Sbjct: 166 ECRYM--ASSSKDGSVRVWDTTAG---------RCERILTGHTQSVTCLRWGGDG-LLYS 213
Query: 137 GSWDCTISLWRTNDS------DAAGNQVSIKK-------RKGNNQVEEPQLEGE----AI 179
S D TI +WR +D G+ V+ R G + E + + ++
Sbjct: 214 ASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASINAQDLQGSL 273
Query: 180 STLVGHTQCVSSVVWPQ-QETIYSASWDHSVRTWD-VEMGKDLSDIFCGKALNCIDIGGE 237
L ++V Q E + S S D ++ W E K L+ + +AL +
Sbjct: 274 QELKDRALRRYNLVRGQGPERLVSGSDDFTLFMWSPAEDKKPLARMTGHQALINQVLFSP 333
Query: 238 GSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKV 297
S +IA+ D +++WD R T + H + + W S L+S S D +
Sbjct: 334 DSRIIASASFDKSIKLWDGR---TGKYLASLRGHVAAVYQIAWSADSRL-LVSGSSDSTL 389
Query: 298 MLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKL 338
+WD++ + + H D+V DW G V SGG D L
Sbjct: 390 KVWDVKAQKLAADLPGHADEVYAVDWSPDGQRVASGGKDKCL 431
Score = 145 (56.1 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 52/200 (26%), Positives = 86/200 (43%)
Query: 140 DCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQE 198
+ T SL +T +S A + + + + S+L GH++ V SV + P +
Sbjct: 19 EITSSLGKTLESQAVETEKVLDIIYQPQAIFRVRAVTRCTSSLEGHSEAVISVAFSPTGK 78
Query: 199 TIYSASWDHSVRTWDVEMGKDLSDIFC-GKALNCIDIGG--EGSALIAAGGSDPILRIWD 255
+ S S D +VR WD + + C G + I +G L A+G + + +WD
Sbjct: 79 YLASGSGDTTVRFWD--LSTETPHFTCQGHRHWVLSISWSPDGKTL-ASGCKNGQILLWD 135
Query: 256 PRKPGTSAPVFQ-FSSHNSWISACKW---H-NKSWFHLISASYDGKVMLWDLRTAWPLSV 310
P T V + + H+ WI+ W H N ++ S+S DG V +WD +
Sbjct: 136 P---STGKQVGRVLAGHSKWITGLSWEPLHANPECRYMASSSKDGSVRVWDTTAGRCERI 192
Query: 311 IDSHKDKVLCADWWRGDSVI 330
+ H V C W GD ++
Sbjct: 193 LTGHTQSVTCLRWG-GDGLL 211
>ZFIN|ZDB-GENE-030131-445 [details] [associations]
symbol:rbb4 "retinoblastoma binding protein 4"
species:7955 "Danio rerio" [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-445
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BX465206
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
IPI:IPI00995625 Ensembl:ENSDART00000130326 ArrayExpress:E7FEX2
Bgee:E7FEX2 Uniprot:E7FEX2
Length = 444
Score = 164 (62.8 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 56/185 (30%), Positives = 78/185 (42%)
Query: 171 EPQLEGEAISTLV--GHTQCVSSVVW-PQQE-TIYSASWDHSVRTWDVEM----GK--DL 220
+P GE L GH + + W P + SAS DH++ WD+ GK D
Sbjct: 160 KPDPSGECTPDLRLRGHQKEGYGLSWNPNLSGCLLSASDDHTICLWDISTVPKEGKIVDA 219
Query: 221 SDIFCGKALNCIDIGGE--GSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISAC 278
IF G D+ +L + D L IWD R TS P +H + ++
Sbjct: 220 KTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCL 279
Query: 279 KWHNKSWFHLISASYDGKVMLWDLRTA-WPLSVIDSHKDKVLCADWWRGDSVI--SGGVD 335
++ S F L + S D V LWDLR L +SHKD++ W + I S G D
Sbjct: 280 SFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTD 339
Query: 336 SKLCV 340
+L V
Sbjct: 340 RRLNV 344
Score = 118 (46.6 bits), Expect = 0.00037, P = 0.00037
Identities = 50/198 (25%), Positives = 82/198 (41%)
Query: 115 LRGHKASVHSIA--AETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEP 172
LRGH+ + ++ SG ++ S S D TI LW +S ++G
Sbjct: 173 LRGHQKEGYGLSWNPNLSGCLL-SASDDHTICLW----------DISTVPKEGKI----- 216
Query: 173 QLEGEAISTLVGHTQCVSSVVWPQ-QETIY-SASWDHSVRTWDVEMGKDLSDIFCGKA-- 228
++ + I T GHT V V W E+++ S + D + WD A
Sbjct: 217 -VDAKTIFT--GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHT 273
Query: 229 --LNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKW--HNKS 284
+NC+ ++A G +D + +WD R + F SH I +W HN++
Sbjct: 274 AEVNCLSFNPYSEFILATGSADKTVALWDLRN--LKLKLHSFESHKDEIFQVQWSPHNET 331
Query: 285 WFHLISASYDGKVMLWDL 302
L S+ D ++ +WDL
Sbjct: 332 I--LASSGTDRRLNVWDL 347
>ZFIN|ZDB-GENE-030131-6305 [details] [associations]
symbol:fbxw11a "F-box and WD-40 domain protein
11a" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-030131-6305 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
HSSP:Q9Y297 GeneTree:ENSGT00690000101849 EMBL:CABZ01001943
EMBL:CABZ01001944 EMBL:CABZ01001945 EMBL:CABZ01001946 EMBL:BC045356
IPI:IPI00502564 RefSeq:NP_958467.1 UniGene:Dr.78612 SMR:Q7ZVZ1
STRING:Q7ZVZ1 Ensembl:ENSDART00000036901 GeneID:334373
KEGG:dre:334373 CTD:334373 OMA:MESQINT NextBio:20810369
Uniprot:Q7ZVZ1
Length = 527
Score = 165 (63.1 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 69/283 (24%), Positives = 125/283 (44%)
Query: 38 ILTGCYDNLGRVW-KAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWK 96
I++G DN ++W K C +L GH G SV ++ D + T S D T+R+W
Sbjct: 238 IISGLRDNSIKIWDKQSLECLKVLTGHTG---SVLCLQYDER---VIVTGSSDSTVRVWD 291
Query: 97 FDAEELVN----HPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSD 152
+ E++N H + + + G + + +M + + D ISL R
Sbjct: 292 VSSGEVLNTLIHHNEAVLHLRFCNGLMVTCSKDRSIAVWDM--ASATD--ISLRRVLVGH 347
Query: 153 -AAGNQVS-----IKKRKGNNQVEEPQLEG-EAISTLVGHTQCVSSVVWPQQETIYSASW 205
AA N V I G+ ++ E + TL GH + ++ + + + + S S
Sbjct: 348 RAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY-RDRLVVSGSS 406
Query: 206 DHSVRTWDVEMGKDLSDIFCGKAL-NCIDIGGEGSALIAAGGSDPILRIWD------PRK 258
D+++R WD+E G L + + L CI + I +G D +++WD PR
Sbjct: 407 DNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLQAALDPRA 463
Query: 259 PGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWD 301
P ++ + H+ + ++ F +IS+S+D +++WD
Sbjct: 464 PASTLCLRTLVEHSGRVFRLQFDE---FQIISSSHDDTILIWD 503
Score = 142 (55.0 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 41/169 (24%), Positives = 80/169 (47%)
Query: 176 GEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLS--DIFCGK--ALNC 231
GE ++TL+ H + V + + + + S D S+ WD+ D+S + G A+N
Sbjct: 295 GEVLNTLIHHNEAVLHLRFCNGLMV-TCSKDRSIAVWDMASATDISLRRVLVGHRAAVNV 353
Query: 232 IDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291
+D + +++A G D +++W T V + H I+ ++ ++ ++S
Sbjct: 354 VDF--DDKYIVSASG-DRTIKVWST---STCEFVRTLNGHKRGIACLQYRDRL---VVSG 404
Query: 292 SYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGGVDSKLCV 340
S D + LWD+ L V++ H++ V C + ++SG D K+ V
Sbjct: 405 SSDNTIRLWDIECGACLRVLEGHEELVRCIRF-DNKRIVSGAYDGKIKV 452
Score = 141 (54.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 55/242 (22%), Positives = 105/242 (43%)
Query: 83 VATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCT 142
+ + +D ++++W D + L K+L GH SV + + ++ +GS D T
Sbjct: 238 IISGLRDNSIKIW--DKQSL-------ECLKVLTGHTGSV--LCLQYDERVIVTGSSDST 286
Query: 143 ISLWRTNDSDAAG-----NQVSIKKRKGNNQV----EEPQL------EGEAIS---TLVG 184
+ +W + + N+ + R N + ++ + IS LVG
Sbjct: 287 VRVWDVSSGEVLNTLIHHNEAVLHLRFCNGLMVTCSKDRSIAVWDMASATDISLRRVLVG 346
Query: 185 HTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGK-ALNCIDIGGEGSALIA 243
H V+ V + + I SAS D +++ W + + + K + C+ L+
Sbjct: 347 HRAAVNVVDF-DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDR---LVV 402
Query: 244 AGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLR 303
+G SD +R+WD + G V + H + ++ NK ++S +YDGK+ +WDL+
Sbjct: 403 SGSSDNTIRLWDI-ECGACLRVLE--GHEELVRCIRFDNK---RIVSGAYDGKIKVWDLQ 456
Query: 304 TA 305
A
Sbjct: 457 AA 458
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 120 (47.3 bits), Expect = 0.00015, P = 0.00015
Identities = 41/164 (25%), Positives = 71/164 (43%)
Query: 180 STLVGHTQCVSSVVWPQQET-IYSASWDHSVRTWDVEMGKDLSDIFCGKA-LNCIDIGGE 237
+TL GH+ V + + + ++SAS D +V WD E G+ + + + +N
Sbjct: 104 ATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARR 163
Query: 238 GSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKV 297
G L+ G D +++WD RK + FQ N++ N + +IS D +
Sbjct: 164 GPQLVCTGSDDGTVKLWDIRKKA-AIQTFQ----NTYQVLAVTFNDTSDQIISGGIDNDI 218
Query: 298 MLWDLRTAWPLSVIDSHKDKVLCADWW-RGDSVISGGVDSKLCV 340
+WDLR + H D V G ++S +D+ + V
Sbjct: 219 KVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRV 262
Score = 117 (46.2 bits), Expect = 0.00033, P = 0.00033
Identities = 43/166 (25%), Positives = 73/166 (43%)
Query: 179 ISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDI--G 235
I L GH V + P T+ SA +D + W V D G + +++
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWSVYGDCDNYATLKGHSGAVMELHYN 119
Query: 236 GEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDG 295
+GS L +A +D + +WD T V + H S++++C + + + S DG
Sbjct: 120 TDGSMLFSAS-TDKTVAVWDSE---TGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDG 175
Query: 296 KVMLWDLRTAWPLSVIDSHKDKVLCADWW-RGDSVISGGVDSKLCV 340
V LWD+R + + +VL + D +ISGG+D+ + V
Sbjct: 176 TVKLWDIRKKAAIQTFQNTY-QVLAVTFNDTSDQIISGGIDNDIKV 220
Score = 114 (45.2 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 36/116 (31%), Positives = 57/116 (49%)
Query: 34 NPGFILTGCYDNLGRVWKAGGVCTHI--LEGHCGAVSSVNIIKSDGLKYVTVATASKDQT 91
N + + +D L +W G C + L+GH GAV ++ +DG + +AS D+T
Sbjct: 78 NGSTLASAGFDRLILLWSVYGDCDNYATLKGHSGAVMELHY-NTDGSM---LFSASTDKT 133
Query: 92 LRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSG-NMVCSGSWDCTISLW 146
+ +W + E V K L+GH + V+S G +VC+GS D T+ LW
Sbjct: 134 VAVWDSETGERV---------KRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLW 180
Score = 101 (40.6 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 40/184 (21%), Positives = 78/184 (42%)
Query: 176 GEAISTLVGHTQCVSSVVWPQQ---ETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCI 232
GE + L GHT V+S +P + + + + S D +V+ WD+ + + +
Sbjct: 142 GERVKRLKGHTSFVNSC-YPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAV 200
Query: 233 DIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISAS 292
+I+ GG D +++WD R+ + + H ++ ++ + L+S +
Sbjct: 201 TFNDTSDQIIS-GGIDNDIKVWDLRQ---NKLTYTMRGHADSVTGLSLSSEGSY-LLSNA 255
Query: 293 YDGKVMLWDLRTAWP----LSVIDS--HK-DKVLCADWWR--GDSVISGGVDSKLCVSSG 343
D V +WD+R P + + H +K L W G + +G DS L
Sbjct: 256 MDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADSFLYPWHS 315
Query: 344 VSIQ 347
+S++
Sbjct: 316 LSVR 319
Score = 92 (37.4 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 35/145 (24%), Positives = 59/145 (40%)
Query: 178 AISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKA--LNCIDIG 235
AI T Q ++ + I S D+ ++ WD+ K L+ G A + + +
Sbjct: 187 AIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNK-LTYTMRGHADSVTGLSLS 245
Query: 236 GEGSALIAAGGSDPILRIWD--PRKPGTSA-PVFQFSSHN--SWISACKWHNKSWFHLIS 290
EGS L++ D +R+WD P P +FQ + HN + C W + + +
Sbjct: 246 SEGSYLLS-NAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSW-SPDGSKIAA 303
Query: 291 ASYDGKVMLWDLRTAWPLSVIDSHK 315
S D + W + L I H+
Sbjct: 304 GSADSFLYPWHSLSVRSLGQIPRHR 328
Score = 83 (34.3 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 30/108 (27%), Positives = 51/108 (47%)
Query: 59 ILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGH 118
+L GH G V + T+A+A D+ + LW + ++ L+GH
Sbjct: 62 LLSGHEGEVYCCKFHPNGS----TLASAGFDRLILLWSVYGD--------CDNYATLKGH 109
Query: 119 KASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGN 166
+V + T G+M+ S S D T+++W DS+ G +V K+ KG+
Sbjct: 110 SGAVMELHYNTDGSMLFSASTDKTVAVW---DSET-GERV--KRLKGH 151
>GENEDB_PFALCIPARUM|PFC0100c [details] [associations]
symbol:PFC0100c "regulatory protein, putative"
species:5833 "Plasmodium falciparum" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
EMBL:AL844502 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_001351097.1
ProteinModelPortal:O97334 IntAct:O97334 MINT:MINT-1755911
EnsemblProtists:PFC0100c:mRNA GeneID:814338 KEGG:pfa:PFC0100c
EuPathDB:PlasmoDB:PF3D7_0302000 OMA:GHINSIR ProtClustDB:CLSZ2733686
Uniprot:O97334
Length = 600
Score = 140 (54.3 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 38/142 (26%), Positives = 65/142 (45%)
Query: 181 TLVGHTQCVSSV-VWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCG--KALNCIDIGGE 237
TL GH + + + + ++S D+ V+ WD+E K + D + G + C+ +
Sbjct: 323 TLTGHINSIRDIKISKKNPYLFSCGEDNRVKCWDLEYNKVIRD-YHGHLSGVYCLSLH-P 380
Query: 238 GSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWI-SACKWHNKSWFHLISASYDGK 296
L+ +GG D ++R+WD R T + VF S H + S C + ++S S D
Sbjct: 381 SLDLLMSGGRDAVVRVWDIR---TKSSVFVLSGHTGTVMSICSQSVEP--QVVSGSQDKM 435
Query: 297 VMLWDLRTAWPLSVIDSHKDKV 318
+ LWDL + HK +
Sbjct: 436 IRLWDLNNGKCRISLTHHKKSI 457
Score = 70 (29.7 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 21/79 (26%), Positives = 34/79 (43%)
Query: 68 SSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAA 127
S NI+ SD LK++ K W F P K+ ++++ GH V+ +
Sbjct: 245 SDDNILSSDVLKHIKTLDIHKKIKKPKWHF--------PYKL--YRVILGHSGWVNCVDV 294
Query: 128 ETSGNMVCSGSWDCTISLW 146
+ S +GS D I +W
Sbjct: 295 DISNEWFATGSNDRLIKIW 313
>UNIPROTKB|O97334 [details] [associations]
symbol:PFC0100c "Regulatory protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
EMBL:AL844502 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_001351097.1
ProteinModelPortal:O97334 IntAct:O97334 MINT:MINT-1755911
EnsemblProtists:PFC0100c:mRNA GeneID:814338 KEGG:pfa:PFC0100c
EuPathDB:PlasmoDB:PF3D7_0302000 OMA:GHINSIR ProtClustDB:CLSZ2733686
Uniprot:O97334
Length = 600
Score = 140 (54.3 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 38/142 (26%), Positives = 65/142 (45%)
Query: 181 TLVGHTQCVSSV-VWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCG--KALNCIDIGGE 237
TL GH + + + + ++S D+ V+ WD+E K + D + G + C+ +
Sbjct: 323 TLTGHINSIRDIKISKKNPYLFSCGEDNRVKCWDLEYNKVIRD-YHGHLSGVYCLSLH-P 380
Query: 238 GSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWI-SACKWHNKSWFHLISASYDGK 296
L+ +GG D ++R+WD R T + VF S H + S C + ++S S D
Sbjct: 381 SLDLLMSGGRDAVVRVWDIR---TKSSVFVLSGHTGTVMSICSQSVEP--QVVSGSQDKM 435
Query: 297 VMLWDLRTAWPLSVIDSHKDKV 318
+ LWDL + HK +
Sbjct: 436 IRLWDLNNGKCRISLTHHKKSI 457
Score = 70 (29.7 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 21/79 (26%), Positives = 34/79 (43%)
Query: 68 SSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAA 127
S NI+ SD LK++ K W F P K+ ++++ GH V+ +
Sbjct: 245 SDDNILSSDVLKHIKTLDIHKKIKKPKWHF--------PYKL--YRVILGHSGWVNCVDV 294
Query: 128 ETSGNMVCSGSWDCTISLW 146
+ S +GS D I +W
Sbjct: 295 DISNEWFATGSNDRLIKIW 313
>WB|WBGene00010556 [details] [associations]
symbol:rack-1 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0040017
"positive regulation of locomotion" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0006997 "nucleus organization" evidence=IMP] [GO:0007411 "axon
guidance" evidence=IMP] [GO:0048675 "axon extension" evidence=IMP]
[GO:0005813 "centrosome" evidence=IDA] [GO:0000281 "cytokinesis
after mitosis" evidence=IMP] [GO:0040038 "polar body extrusion
after meiotic divisions" evidence=IMP] [GO:0051304 "chromosome
separation" evidence=IMP] [GO:0000776 "kinetochore" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005635 "nuclear
envelope" evidence=IDA] [GO:0033365 "protein localization to
organelle" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008045 "motor neuron axon guidance"
evidence=IGI;IMP] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030424 "axon" evidence=IDA] [GO:0044297 "cell body"
evidence=IDA] [GO:0030334 "regulation of cell migration"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0005737 GO:GO:0018991
GO:GO:0040010 GO:GO:0005635 GO:GO:0005813 GO:GO:0000776
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0040017 GO:GO:0030426 GO:GO:0030334
GO:GO:0008045 GO:GO:0040035 GO:GO:0000281 GO:GO:0033365
GO:GO:0040038 GO:GO:0044297 GO:GO:0006997 GO:GO:0048675 EMBL:Z69664
HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 PIR:T23309 RefSeq:NP_501859.1
ProteinModelPortal:Q21215 SMR:Q21215 DIP:DIP-26516N IntAct:Q21215
MINT:MINT-1071040 STRING:Q21215 World-2DPAGE:0020:Q21215
PaxDb:Q21215 PRIDE:Q21215 EnsemblMetazoa:K04D7.1.1
EnsemblMetazoa:K04D7.1.2 EnsemblMetazoa:K04D7.1.3
EnsemblMetazoa:K04D7.1.4 GeneID:177895 KEGG:cel:CELE_K04D7.1
UCSC:K04D7.1.1 CTD:177895 WormBase:K04D7.1 InParanoid:Q21215
NextBio:898836 GO:GO:0051304 Uniprot:Q21215
Length = 325
Score = 132 (51.5 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 33/107 (30%), Positives = 51/107 (47%)
Query: 57 THILEGHCGAVSSV-NIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKIL 115
T LEGH G V+ + ++D TV ++S+D+T+ +W D+ V+ R + L
Sbjct: 9 TGTLEGHTGWVTQIATYTRNDK---TTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSL 65
Query: 116 RGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKK 162
GH V + + G SGSWD T+ LW N + +S K
Sbjct: 66 TGHNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTK 112
Score = 125 (49.1 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 49/194 (25%), Positives = 78/194 (40%)
Query: 115 LRGHKASVHSIAAETSGNM--VCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEP 172
L GH V IA T + V S S D TI +W D D+ V+E
Sbjct: 12 LEGHTGWVTQIATYTRNDKTTVLSSSRDKTILVW---DVDSVA------------PVDEG 56
Query: 173 QLEGEAISTLVGHTQCVSSVVWPQQ-ETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNC 231
+ G + +L GH VS VV + S SWD ++R WD+ G F +
Sbjct: 57 PI-GRPVRSLTGHNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQ-FISHTKDV 114
Query: 232 IDIG-GEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWH--NKSWFHL 288
+ + + I +G D +++W+ H W+S ++ N+ +
Sbjct: 115 LSVAFSADNRQIVSGSRDKSIKLWNTL--AQCKYTITDDCHTDWVSTVRFSPSNRDPV-I 171
Query: 289 ISASYDGKVMLWDL 302
+SA +D V +W+L
Sbjct: 172 VSAGWDKVVKVWNL 185
Score = 70 (29.7 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 27/132 (20%), Positives = 52/132 (39%)
Query: 175 EGEAISTLVGHTQCVSSVVWP-QQETIYSASWDHSVRTWDV--EMGKDLSDIFCGKALNC 231
+G + + HT+ V SV + I S S D S++ W+ + ++D ++
Sbjct: 100 QGVSTRQFISHTKDVLSVAFSADNRQIVSGSRDKSIKLWNTLAQCKYTITDDCHTDWVST 159
Query: 232 IDIGGEG-SALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLIS 290
+ +I + G D ++++W+ G H +++ S
Sbjct: 160 VRFSPSNRDPVIVSAGWDKVVKVWNL---GNCRLKTNHIGHTGYVNTVTVSPDGSL-CAS 215
Query: 291 ASYDGKVMLWDL 302
DG+ MLWDL
Sbjct: 216 GGKDGQAMLWDL 227
Score = 63 (27.2 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 16/67 (23%), Positives = 34/67 (50%)
Query: 153 AAGNQVSIKKRKGNNQVEE--PQLEGEAISTLVGHTQCVSSVVWPQQ-ETIYSASWDHSV 209
A G+ + I + ++EE P++ S+ QC+S + W Q +T+++ D+ +
Sbjct: 257 AVGSSIKIWDLEDKKEIEELKPEIASSG-SSRGSSPQCIS-LAWSQDGQTLFAGYTDNII 314
Query: 210 RTWDVEM 216
R + V +
Sbjct: 315 RVYQVSI 321
Score = 56 (24.8 bits), Expect = 8.0e-08, Sum P(2) = 8.0e-08
Identities = 21/91 (23%), Positives = 44/91 (48%)
Query: 175 EGEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDI---------FC 225
EG+ + TL G+ ++++ + A+ S++ WD+E K++ ++
Sbjct: 229 EGKHLYTLPGN-DVINAMSFSPNRYWLCAAVGSSIKIWDLEDKKEIEELKPEIASSGSSR 287
Query: 226 GKALNCIDIGG--EGSALIAAGGSDPILRIW 254
G + CI + +G L A G +D I+R++
Sbjct: 288 GSSPQCISLAWSQDGQTLFA-GYTDNIIRVY 317
>UNIPROTKB|Q21215 [details] [associations]
symbol:rack-1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 GO:GO:0005737
GO:GO:0018991 GO:GO:0040010 GO:GO:0005635 GO:GO:0005813
GO:GO:0000776 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040017 GO:GO:0030426
GO:GO:0030334 GO:GO:0008045 GO:GO:0040035 GO:GO:0000281
GO:GO:0033365 GO:GO:0040038 GO:GO:0044297 GO:GO:0006997
GO:GO:0048675 EMBL:Z69664 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 PIR:T23309
RefSeq:NP_501859.1 ProteinModelPortal:Q21215 SMR:Q21215
DIP:DIP-26516N IntAct:Q21215 MINT:MINT-1071040 STRING:Q21215
World-2DPAGE:0020:Q21215 PaxDb:Q21215 PRIDE:Q21215
EnsemblMetazoa:K04D7.1.1 EnsemblMetazoa:K04D7.1.2
EnsemblMetazoa:K04D7.1.3 EnsemblMetazoa:K04D7.1.4 GeneID:177895
KEGG:cel:CELE_K04D7.1 UCSC:K04D7.1.1 CTD:177895 WormBase:K04D7.1
InParanoid:Q21215 NextBio:898836 GO:GO:0051304 Uniprot:Q21215
Length = 325
Score = 132 (51.5 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 33/107 (30%), Positives = 51/107 (47%)
Query: 57 THILEGHCGAVSSV-NIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKIL 115
T LEGH G V+ + ++D TV ++S+D+T+ +W D+ V+ R + L
Sbjct: 9 TGTLEGHTGWVTQIATYTRNDK---TTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSL 65
Query: 116 RGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKK 162
GH V + + G SGSWD T+ LW N + +S K
Sbjct: 66 TGHNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTK 112
Score = 125 (49.1 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 49/194 (25%), Positives = 78/194 (40%)
Query: 115 LRGHKASVHSIAAETSGNM--VCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEP 172
L GH V IA T + V S S D TI +W D D+ V+E
Sbjct: 12 LEGHTGWVTQIATYTRNDKTTVLSSSRDKTILVW---DVDSVA------------PVDEG 56
Query: 173 QLEGEAISTLVGHTQCVSSVVWPQQ-ETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNC 231
+ G + +L GH VS VV + S SWD ++R WD+ G F +
Sbjct: 57 PI-GRPVRSLTGHNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQ-FISHTKDV 114
Query: 232 IDIG-GEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWH--NKSWFHL 288
+ + + I +G D +++W+ H W+S ++ N+ +
Sbjct: 115 LSVAFSADNRQIVSGSRDKSIKLWNTL--AQCKYTITDDCHTDWVSTVRFSPSNRDPV-I 171
Query: 289 ISASYDGKVMLWDL 302
+SA +D V +W+L
Sbjct: 172 VSAGWDKVVKVWNL 185
Score = 70 (29.7 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 27/132 (20%), Positives = 52/132 (39%)
Query: 175 EGEAISTLVGHTQCVSSVVWP-QQETIYSASWDHSVRTWDV--EMGKDLSDIFCGKALNC 231
+G + + HT+ V SV + I S S D S++ W+ + ++D ++
Sbjct: 100 QGVSTRQFISHTKDVLSVAFSADNRQIVSGSRDKSIKLWNTLAQCKYTITDDCHTDWVST 159
Query: 232 IDIGGEG-SALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLIS 290
+ +I + G D ++++W+ G H +++ S
Sbjct: 160 VRFSPSNRDPVIVSAGWDKVVKVWNL---GNCRLKTNHIGHTGYVNTVTVSPDGSL-CAS 215
Query: 291 ASYDGKVMLWDL 302
DG+ MLWDL
Sbjct: 216 GGKDGQAMLWDL 227
Score = 63 (27.2 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 16/67 (23%), Positives = 34/67 (50%)
Query: 153 AAGNQVSIKKRKGNNQVEE--PQLEGEAISTLVGHTQCVSSVVWPQQ-ETIYSASWDHSV 209
A G+ + I + ++EE P++ S+ QC+S + W Q +T+++ D+ +
Sbjct: 257 AVGSSIKIWDLEDKKEIEELKPEIASSG-SSRGSSPQCIS-LAWSQDGQTLFAGYTDNII 314
Query: 210 RTWDVEM 216
R + V +
Sbjct: 315 RVYQVSI 321
Score = 56 (24.8 bits), Expect = 8.0e-08, Sum P(2) = 8.0e-08
Identities = 21/91 (23%), Positives = 44/91 (48%)
Query: 175 EGEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDI---------FC 225
EG+ + TL G+ ++++ + A+ S++ WD+E K++ ++
Sbjct: 229 EGKHLYTLPGN-DVINAMSFSPNRYWLCAAVGSSIKIWDLEDKKEIEELKPEIASSGSSR 287
Query: 226 GKALNCIDIGG--EGSALIAAGGSDPILRIW 254
G + CI + +G L A G +D I+R++
Sbjct: 288 GSSPQCISLAWSQDGQTLFA-GYTDNIIRVY 317
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 166 (63.5 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 47/158 (29%), Positives = 76/158 (48%)
Query: 179 ISTLVGHTQCVSSV-VWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNC-IDIGG 236
I +L GHT V SV + +E I + S S+R WD+E K L + KA C +D
Sbjct: 56 IMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHP 115
Query: 237 EGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWH-NKSWFHLISASYDG 295
G +A+G D +++WD R+ G VF++ H+ + ++ + W L SA+ D
Sbjct: 116 YGE-FVASGSQDTNIKLWDIRRKGC---VFRYRGHSQAVRCLRFSPDGKW--LASAADDH 169
Query: 296 KVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGG 333
V LWDL +S H V ++ + +++ G
Sbjct: 170 TVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASG 207
Score = 137 (53.3 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 53/223 (23%), Positives = 97/223 (43%)
Query: 118 HKASVHSIA-AETSGNMVCSGSWDCTISLWRTNDSDA----AGNQVSIKKRKGNNQVEEP 172
H ++V S+ + SG ++ +G DC ++LW N + G+ ++ + N EE
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTP-EEL 77
Query: 173 QLEG-----------EA---ISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMG 217
+ G EA + TL+GH + S+ + P E + S S D +++ WD+
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRR- 136
Query: 218 KDLSDIFCG--KALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWI 275
K + G +A+ C+ +G L A+ D +++WD + +F H +
Sbjct: 137 KGCVFRYRGHSQAVRCLRFSPDGKWL-ASAADDHTVKLWDLT---AGKMMSEFPGHTGPV 192
Query: 276 SACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKV 318
+ ++H + L S S D + WDL +S I+ V
Sbjct: 193 NVVEFHPNEYL-LASGSSDRTIRFWDLEKFQVVSCIEGEPGPV 234
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 166 (63.5 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 47/158 (29%), Positives = 76/158 (48%)
Query: 179 ISTLVGHTQCVSSV-VWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNC-IDIGG 236
I +L GHT V SV + +E I + S S+R WD+E K L + KA C +D
Sbjct: 56 IMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHP 115
Query: 237 EGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWH-NKSWFHLISASYDG 295
G +A+G D +++WD R+ G VF++ H+ + ++ + W L SA+ D
Sbjct: 116 YGE-FVASGSQDTNIKLWDIRRKGC---VFRYRGHSQAVRCLRFSPDGKW--LASAADDH 169
Query: 296 KVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGG 333
V LWDL +S H V ++ + +++ G
Sbjct: 170 TVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASG 207
Score = 137 (53.3 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 53/223 (23%), Positives = 97/223 (43%)
Query: 118 HKASVHSIA-AETSGNMVCSGSWDCTISLWRTNDSDA----AGNQVSIKKRKGNNQVEEP 172
H ++V S+ + SG ++ +G DC ++LW N + G+ ++ + N EE
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTP-EEL 77
Query: 173 QLEG-----------EA---ISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMG 217
+ G EA + TL+GH + S+ + P E + S S D +++ WD+
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRR- 136
Query: 218 KDLSDIFCG--KALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWI 275
K + G +A+ C+ +G L A+ D +++WD + +F H +
Sbjct: 137 KGCVFRYRGHSQAVRCLRFSPDGKWL-ASAADDHTVKLWDLT---AGKMMSEFPGHTGPV 192
Query: 276 SACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKV 318
+ ++H + L S S D + WDL +S I+ V
Sbjct: 193 NVVEFHPNEYL-LASGSSDRTIRFWDLEKFQVVSCIEGEPGPV 234
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 166 (63.5 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 47/158 (29%), Positives = 76/158 (48%)
Query: 179 ISTLVGHTQCVSSV-VWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNC-IDIGG 236
I +L GHT V SV + +E I + S S+R WD+E K L + KA C +D
Sbjct: 56 IMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHP 115
Query: 237 EGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWH-NKSWFHLISASYDG 295
G +A+G D +++WD R+ G VF++ H+ + ++ + W L SA+ D
Sbjct: 116 YGE-FVASGSQDTNIKLWDIRRKGC---VFRYRGHSQAVRCLRFSPDGKW--LASAADDH 169
Query: 296 KVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGG 333
V LWDL +S H V ++ + +++ G
Sbjct: 170 TVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASG 207
Score = 137 (53.3 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 53/223 (23%), Positives = 97/223 (43%)
Query: 118 HKASVHSIA-AETSGNMVCSGSWDCTISLWRTNDSDA----AGNQVSIKKRKGNNQVEEP 172
H ++V S+ + SG ++ +G DC ++LW N + G+ ++ + N EE
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTP-EEL 77
Query: 173 QLEG-----------EA---ISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMG 217
+ G EA + TL+GH + S+ + P E + S S D +++ WD+
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRR- 136
Query: 218 KDLSDIFCG--KALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWI 275
K + G +A+ C+ +G L A+ D +++WD + +F H +
Sbjct: 137 KGCVFRYRGHSQAVRCLRFSPDGKWL-ASAADDHTVKLWDLT---AGKMMSEFPGHTGPV 192
Query: 276 SACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKV 318
+ ++H + L S S D + WDL +S I+ V
Sbjct: 193 NVVEFHPNEYL-LASGSSDRTIRFWDLEKFQVVSCIEGEPGPV 234
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 166 (63.5 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 44/158 (27%), Positives = 77/158 (48%)
Query: 179 ISTLVGHTQCVSSV-VWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNC-IDIGG 236
+ +L GHT + S+ + ++E I + S S+R WD+E K L + KA C +D
Sbjct: 56 VMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHP 115
Query: 237 EGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWH-NKSWFHLISASYDG 295
GS +A+G D +++WD R+ G +F++ SH + ++ + W L SA+ D
Sbjct: 116 YGS-FVASGSLDTDIKLWDVRRKGC---IFKYKSHTQAVRCLRFSPDGKW--LASAADDH 169
Query: 296 KVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGG 333
V LWDL + H V ++ + +++ G
Sbjct: 170 TVKLWDLTAGKVMFEFTGHSGPVNVVEFHPSEYLLASG 207
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 166 (63.5 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 47/158 (29%), Positives = 76/158 (48%)
Query: 179 ISTLVGHTQCVSSV-VWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNC-IDIGG 236
I +L GHT V SV + +E I + S S+R WD+E K L + KA C +D
Sbjct: 56 IMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHP 115
Query: 237 EGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWH-NKSWFHLISASYDG 295
G +A+G D +++WD R+ G VF++ H+ + ++ + W L SA+ D
Sbjct: 116 YGE-FVASGSQDTNIKLWDIRRKGC---VFRYRGHSQAVRCLRFSPDGKW--LASAADDH 169
Query: 296 KVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGG 333
V LWDL +S H V ++ + +++ G
Sbjct: 170 TVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASG 207
Score = 137 (53.3 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 53/223 (23%), Positives = 97/223 (43%)
Query: 118 HKASVHSIA-AETSGNMVCSGSWDCTISLWRTNDSDA----AGNQVSIKKRKGNNQVEEP 172
H ++V S+ + SG ++ +G DC ++LW N + G+ ++ + N EE
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTP-EEL 77
Query: 173 QLEG-----------EA---ISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMG 217
+ G EA + TL+GH + S+ + P E + S S D +++ WD+
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRR- 136
Query: 218 KDLSDIFCG--KALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWI 275
K + G +A+ C+ +G L A+ D +++WD + +F H +
Sbjct: 137 KGCVFRYRGHSQAVRCLRFSPDGKWL-ASAADDHTVKLWDLT---AGKMMSEFPGHTGPV 192
Query: 276 SACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKV 318
+ ++H + L S S D + WDL +S I+ V
Sbjct: 193 NVVEFHPNEYL-LASGSSDRTIRFWDLEKFQVVSCIEGEPGPV 234
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 166 (63.5 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 47/158 (29%), Positives = 76/158 (48%)
Query: 179 ISTLVGHTQCVSSV-VWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNC-IDIGG 236
I +L GHT V SV + +E I + S S+R WD+E K L + KA C +D
Sbjct: 56 IMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHP 115
Query: 237 EGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWH-NKSWFHLISASYDG 295
G +A+G D +++WD R+ G VF++ H+ + ++ + W L SA+ D
Sbjct: 116 YGE-FVASGSQDTNIKLWDIRRKGC---VFRYRGHSQAVRCLRFSPDGKW--LASAADDH 169
Query: 296 KVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGG 333
V LWDL +S H V ++ + +++ G
Sbjct: 170 TVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASG 207
Score = 137 (53.3 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 53/223 (23%), Positives = 97/223 (43%)
Query: 118 HKASVHSIA-AETSGNMVCSGSWDCTISLWRTNDSDA----AGNQVSIKKRKGNNQVEEP 172
H ++V S+ + SG ++ +G DC ++LW N + G+ ++ + N EE
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTP-EEL 77
Query: 173 QLEG-----------EA---ISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMG 217
+ G EA + TL+GH + S+ + P E + S S D +++ WD+
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRR- 136
Query: 218 KDLSDIFCG--KALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWI 275
K + G +A+ C+ +G L A+ D +++WD + +F H +
Sbjct: 137 KGCVFRYRGHSQAVRCLRFSPDGKWL-ASAADDHTVKLWDLT---AGKMMSEFPGHTGPV 192
Query: 276 SACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKV 318
+ ++H + L S S D + WDL +S I+ V
Sbjct: 193 NVVEFHPNEYL-LASGSSDRTIRFWDLEKFQVVSCIEGEPGPV 234
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 164 (62.8 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 90/344 (26%), Positives = 146/344 (42%)
Query: 23 HDDWVSAVDGSNPGFIL-TGCYDNLGRVW--KAGGVCTHILEGHCGAVSSVN---IIKSD 76
H WV ++ S G L +GC + +W G L GH ++ ++ + +
Sbjct: 155 HRHWVLSISWSPDGRKLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANP 214
Query: 77 GLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCS 136
+YV A++SKD ++R+W A R +IL GH SV + G ++ S
Sbjct: 215 ECRYV--ASSSKDGSVRIWDTTAG---------RCERILTGHTQSVTCLRWGGDG-LLYS 262
Query: 137 GSWDCTISLWRTNDS------DAAGNQVSIKK-------RKGNNQVEE----PQ-LEGEA 178
S D TI +WR +D G+ V+ R G + E PQ L+G +
Sbjct: 263 ASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASVNPQDLQG-S 321
Query: 179 ISTLVGHTQCVSSVVWPQ-QETIYSASWDHSVRTWD-VEMGKDLSDIFCGKALNCIDIGG 236
+ L ++V Q E + S S D ++ W E K L+ + +AL +
Sbjct: 322 LQELKERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFS 381
Query: 237 EGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGK 296
S ++A+ D +++WD R T + H + + W S L+S S D
Sbjct: 382 PDSRIVASASFDKSIKLWDGR---TGKYLASLRGHVAAVYQIAWSADSRL-LVSGSSDST 437
Query: 297 VMLWDLRTAWPLSV-IDSHKDKVLCADWWR-GDSVISGGVDSKL 338
+ +WD++ A L++ + H D+V DW G V SGG D L
Sbjct: 438 LKVWDVK-AQKLAMDLPGHADEVYAVDWSPDGQRVASGGKDKCL 480
Score = 142 (55.0 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 46/160 (28%), Positives = 73/160 (45%)
Query: 180 STLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFC-GKALNCIDIGG- 236
S+L GH++ V SV + P + + S S D +VR WD + + C G + I
Sbjct: 108 SSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWD--LSTETPHFTCKGHRHWVLSISWS 165
Query: 237 -EGSALIAAGGSDPILRIWDPRKPGTSAPVFQ-FSSHNSWISACKW---H-NKSWFHLIS 290
+G L A+G + + +WDP T V + + H+ WI+ W H N ++ S
Sbjct: 166 PDGRKL-ASGCKNGQILLWDP---STGKQVGRTLAGHSKWITGLSWEPLHANPECRYVAS 221
Query: 291 ASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVI 330
+S DG V +WD ++ H V C W GD ++
Sbjct: 222 SSKDGSVRIWDTTAGRCERILTGHTQSVTCLRWG-GDGLL 260
>SGD|S000002304 [details] [associations]
symbol:COP1 "Alpha subunit of COPI vesicle coatomer complex"
species:4932 "Saccharomyces cerevisiae" [GO:0030126 "COPI vesicle
coat" evidence=IEA;ISS;IMP] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0006890 "retrograde
vesicle-mediated transport, Golgi to ER" evidence=IMP] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000002304 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006938 GO:GO:0006888
GO:GO:0030126 GO:GO:0006890 GO:GO:0043130 EMBL:X97751
HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OrthoDB:EOG40VZXP EMBL:Z46617
EMBL:X83754 EMBL:Z74193 EMBL:Z74192 PIR:S67692 RefSeq:NP_010136.1
PDB:3MKQ PDB:3MV2 PDB:3MV3 PDBsum:3MKQ PDBsum:3MV2 PDBsum:3MV3
ProteinModelPortal:P53622 SMR:P53622 DIP:DIP-2582N IntAct:P53622
MINT:MINT-422687 STRING:P53622 PaxDb:P53622 PeptideAtlas:P53622
EnsemblFungi:YDL145C GeneID:851410 KEGG:sce:YDL145C CYGD:YDL145c
OMA:YDQHNPF EvolutionaryTrace:P53622 NextBio:968591
Genevestigator:P53622 GermOnline:YDL145C Uniprot:P53622
Length = 1201
Score = 169 (64.5 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 80/307 (26%), Positives = 126/307 (41%)
Query: 23 HDDWVSAVD--GSNPGFILTGCYDNLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLK 79
H+ V +D + P F+ G D +VW C + L GH V +V + L
Sbjct: 52 HEGPVRGLDFHPTQPIFVSAGD-DYTIKVWSLDTNKCLYTLTGHLDYVRTVFFHRE--LP 108
Query: 80 YVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSW 139
++ +AS DQT+R+W + + K+I L GH V + +++ S S
Sbjct: 109 WII--SASDDQTIRIWNWQ------NRKEIAC---LTGHNHFVMCAQFHPTDDLIVSASL 157
Query: 140 DCTISLWRTND----SDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLV--GHTQCVSSVV 193
D TI +W + A G ++ + + L G+ + + GHT+ V+
Sbjct: 158 DETIRIWDISGLRKRHSAPGTSSFEEQMSAQQNLLDGSL-GDCVVKFILEGHTRGVNWAS 216
Query: 194 W-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCID--IGGEGSALIAAGGSDPI 250
+ P I S S D V+ W + K C N +D I LI + G D
Sbjct: 217 FHPTLPLIVSGSDDRQVKLWRMSATKAWEVDTCRGHTNNVDSVIFHPHQNLIISVGEDKT 276
Query: 251 LRIWDPRKPGTSAPVFQFSSHNS--WISACKWHNKSWFHLISASYDGKVMLWDLRTAWPL 308
LR+WD K PV QF N W+ A H +L A++D +M++ L P
Sbjct: 277 LRVWDLDK---RTPVKQFKRENDRFWLIAAHPH----INLFGAAHDSGIMVFKLDRERPC 329
Query: 309 SVIDSHK 315
S I ++
Sbjct: 330 SFIHQNQ 336
>UNIPROTKB|I3LKT8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042826 "histone deacetylase binding" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0033186 "CAF-1
complex" evidence=IEA] [GO:0031497 "chromatin assembly"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 EMBL:FP312679
EMBL:FP325261 ProteinModelPortal:I3LKT8 PRIDE:I3LKT8
Ensembl:ENSSSCT00000023350 Uniprot:I3LKT8
Length = 390
Score = 162 (62.1 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 53/172 (30%), Positives = 74/172 (43%)
Query: 182 LVGHTQCVSSVVW-PQQET-IYSASWDHSVRTWDVEM----GK--DLSDIFCGKALNCID 233
L GH + + W P + SAS DH++ WD+ GK D IF G D
Sbjct: 138 LRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVED 197
Query: 234 IGGE--GSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291
+ +L + D L IWD R TS P +H + ++ ++ S F L +
Sbjct: 198 VSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATG 257
Query: 292 SYDGKVMLWDLRTA-WPLSVIDSHKDKVLCADWWRGDSVI--SGGVDSKLCV 340
S D V LWDLR L +SHKD++ W + I S G D +L V
Sbjct: 258 SADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNV 309
Score = 125 (49.1 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 51/198 (25%), Positives = 85/198 (42%)
Query: 115 LRGHKASVHSIA--AETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEP 172
LRGH+ + ++ SG+++ S S D TI LW +S ++G
Sbjct: 138 LRGHQKEGYGLSWNPNLSGHLL-SASDDHTICLW----------DISAVPKEGK------ 180
Query: 173 QLEGEAISTLVGHTQCVSSVVWPQ-QETIY-SASWDHSVRTWDVEMG---KDLSDIFCGK 227
++ + I T GHT V V W E+++ S + D + WD K +
Sbjct: 181 VVDAKTIFT--GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHT 238
Query: 228 A-LNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKW--HNKS 284
A +NC+ ++A G +D + +WD R + F SH I +W HN++
Sbjct: 239 AEVNCLSFNPYSEFILATGSADKTVALWDLRN--LKLKLHSFESHKDEIFQVQWSPHNET 296
Query: 285 WFHLISASYDGKVMLWDL 302
L S+ D ++ +WDL
Sbjct: 297 I--LASSGTDRRLNVWDL 312
>UNIPROTKB|F1P5E8 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AADN02035964
EMBL:AADN02035965 EMBL:AADN02035966 IPI:IPI00735168
Ensembl:ENSGALT00000003489 ArrayExpress:F1P5E8 Uniprot:F1P5E8
Length = 515
Score = 164 (62.8 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 67/288 (23%), Positives = 123/288 (42%)
Query: 38 ILTGCYDNLGRVW-KAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWK 96
I++G DN ++W K C +L GH G SV ++ D + T S D T+R+W
Sbjct: 226 IISGLRDNSIKIWDKTSLECLKVLTGHTG---SVLCLQYDER---VIVTGSSDSTVRVWD 279
Query: 97 FDAEELVN----HPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSD 152
+ E++N H + + + G + + +M + D T+
Sbjct: 280 VNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDM--ASPTDITLRRVLVGHR- 336
Query: 153 AAGNQVS-----IKKRKGNNQVEEPQLEG-EAISTLVGHTQCVSSVVWPQQETIYSASWD 206
AA N V I G+ ++ E + TL GH + ++ + + + + S S D
Sbjct: 337 AAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY-RDRLVVSGSSD 395
Query: 207 HSVRTWDVEMGKDLSDIFCGKAL-NCIDIGGEGSALIAAGGSDPILRIWD------PRKP 259
+++R WD+E G L + + L CI + I +G D +++WD PR P
Sbjct: 396 NTIRLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLQAALDPRAP 452
Query: 260 GTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWP 307
++ + H+ + ++ F +IS+S+D +++WD P
Sbjct: 453 ASTLCLRTLVEHSGRVFRLQFDE---FQIISSSHDDTILIWDFLNVPP 497
Score = 144 (55.7 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 64/278 (23%), Positives = 117/278 (42%)
Query: 50 WKAGGVCTHILEG-HCGAVSSVNI--IKSDGLKYVTVATASKDQTLRLWKFDAEELVNHP 106
W+ G H L+ C + +S + ++ D K ++ +D ++++W D L
Sbjct: 196 WRCG---RHNLQRIQCRSENSKGVYCLQYDDEKIIS---GLRDNSIKIW--DKTSL---- 243
Query: 107 KKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAG-----NQVSIK 161
K+L GH SV + + ++ +GS D T+ +W N + N+ +
Sbjct: 244 ---ECLKVLTGHTGSV--LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLH 298
Query: 162 KRKGNN-QVEEPQLEGEAI------------STLVGHTQCVSSVVWPQQETIYSASWDHS 208
R N V + A+ LVGH V+ V + + I SAS D +
Sbjct: 299 LRFSNGLMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF-DDKYIVSASGDRT 357
Query: 209 VRTWDVEMGKDLSDIFCGK-ALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQ 267
++ W + + + K + C+ L+ +G SD +R+WD + G V +
Sbjct: 358 IKVWSTSTCEFVRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDI-ECGACLRVLE 413
Query: 268 FSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTA 305
H + ++ NK ++S +YDGK+ +WDL+ A
Sbjct: 414 --GHEELVRCIRFDNK---RIVSGAYDGKIKVWDLQAA 446
Score = 140 (54.3 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 40/169 (23%), Positives = 80/169 (47%)
Query: 176 GEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLS--DIFCGK--ALNC 231
GE ++TL+ H + V + + + + S D S+ WD+ D++ + G A+N
Sbjct: 283 GEVLNTLIHHNEAVLHLRF-SNGLMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNV 341
Query: 232 IDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291
+D + +++A G D +++W T V + H I+ ++ ++ ++S
Sbjct: 342 VDF--DDKYIVSASG-DRTIKVWST---STCEFVRTLNGHKRGIACLQYRDRL---VVSG 392
Query: 292 SYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGGVDSKLCV 340
S D + LWD+ L V++ H++ V C + ++SG D K+ V
Sbjct: 393 SSDNTIRLWDIECGACLRVLEGHEELVRCIRF-DNKRIVSGAYDGKIKV 440
>CGD|CAL0004044 [details] [associations]
symbol:orf19.268 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0070912 "Ddb1-Ckn1 complex" evidence=IEA]
[GO:0006283 "transcription-coupled nucleotide-excision repair"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0004044 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000027 KO:K10570
RefSeq:XP_719966.1 ProteinModelPortal:Q5AEK0 STRING:Q5AEK0
GeneID:3638414 KEGG:cal:CaO19.268 Uniprot:Q5AEK0
Length = 447
Score = 163 (62.4 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 55/197 (27%), Positives = 86/197 (43%)
Query: 120 ASVHSIAAETSG-NMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGE- 177
A+V+S++ ET+ + SGS D +I LW +A + I + + +
Sbjct: 47 AAVNSLSLETTDYQYLLSGSNDSSIKLWDLKQQEAIREENEIDANLHLHPTTFDNFDYDN 106
Query: 178 AISTLVG---------HTQCVSSVVW-PQQETIY-SASWDHSVRTWDVEMGKDLSDIFCG 226
+ST V H +S + W P ++ S+S+DH+V+ WD +
Sbjct: 107 PVSTFVNLATIPKRHHHKFGISCIQWWPYDTGMFASSSFDHTVKIWDTNELTPVHTFDLS 166
Query: 227 KALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWF 286
+ IDI E +ALIA P +R+ D TS+ S H KWH +
Sbjct: 167 NKVYDIDISAE-NALIATANDQPFIRLLDLNS--TSS-AHTLSGHKGKTLVVKWHPINSN 222
Query: 287 HLISASYDGKVMLWDLR 303
L S YDG+V +WD+R
Sbjct: 223 ILASGGYDGEVKIWDIR 239
>UNIPROTKB|Q5AEK0 [details] [associations]
symbol:RAD28 "Putative uncharacterized protein RAD28"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0004044 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000027 KO:K10570
RefSeq:XP_719966.1 ProteinModelPortal:Q5AEK0 STRING:Q5AEK0
GeneID:3638414 KEGG:cal:CaO19.268 Uniprot:Q5AEK0
Length = 447
Score = 163 (62.4 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 55/197 (27%), Positives = 86/197 (43%)
Query: 120 ASVHSIAAETSG-NMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGE- 177
A+V+S++ ET+ + SGS D +I LW +A + I + + +
Sbjct: 47 AAVNSLSLETTDYQYLLSGSNDSSIKLWDLKQQEAIREENEIDANLHLHPTTFDNFDYDN 106
Query: 178 AISTLVG---------HTQCVSSVVW-PQQETIY-SASWDHSVRTWDVEMGKDLSDIFCG 226
+ST V H +S + W P ++ S+S+DH+V+ WD +
Sbjct: 107 PVSTFVNLATIPKRHHHKFGISCIQWWPYDTGMFASSSFDHTVKIWDTNELTPVHTFDLS 166
Query: 227 KALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWF 286
+ IDI E +ALIA P +R+ D TS+ S H KWH +
Sbjct: 167 NKVYDIDISAE-NALIATANDQPFIRLLDLNS--TSS-AHTLSGHKGKTLVVKWHPINSN 222
Query: 287 HLISASYDGKVMLWDLR 303
L S YDG+V +WD+R
Sbjct: 223 ILASGGYDGEVKIWDIR 239
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 162 (62.1 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 68/298 (22%), Positives = 123/298 (41%)
Query: 48 RVWK-AGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHP 106
+VW G L+GH +V ++ S L +A+ S D T++LW F E +
Sbjct: 133 KVWDYETGDFERTLKGHTDSVQDISFDHSGKL----LASCSADMTIKLWDFQGFECI--- 185
Query: 107 KKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGN 166
+ + GH +V S+A +G+ + S S D TI +W + R+
Sbjct: 186 ------RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCV--KTFTGHREWV 237
Query: 167 NQVEEPQLEGEAISTLVGHTQCVSS-VVWPQQETIYSASWDHSVR--TWDVEMGKDLSDI 223
V P +G I++ + Q V VV ++ +H V +W E S I
Sbjct: 238 RMVR-PNQDGTLIASC-SNDQTVRVWVVATKECKAELREHEHVVECISWAPE--SSYSSI 293
Query: 224 FCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNK 283
G G L++ G D +++WD T + H++W+ +H+
Sbjct: 294 SEATGSETKKSGKPGPFLLS-GSRDKTIKMWDV---STGMCLMTLVGHDNWVRGVLFHSG 349
Query: 284 SWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKLCV 340
F ++S + D + +WD + + +++H+ V D+ + V++G VD + V
Sbjct: 350 GKF-ILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 121 (47.7 bits), Expect = 0.00015, P = 0.00015
Identities = 41/160 (25%), Positives = 75/160 (46%)
Query: 161 KKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKD 219
+KR + P E A+S GH V+ V++ P + SAS D +++ WD E G D
Sbjct: 87 QKRDPKEWIPRPP-EKYALS---GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-D 141
Query: 220 LSDIFCGKALNCIDIGGEGSA-LIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISAC 278
G + DI + S L+A+ +D +++WD + G + H+ +S+
Sbjct: 142 FERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ--GFEC-IRTMHGHDHNVSSV 198
Query: 279 KWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKV 318
H++SAS D + +W+++T + + H++ V
Sbjct: 199 AIMPNG-DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWV 237
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 162 (62.1 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 68/298 (22%), Positives = 123/298 (41%)
Query: 48 RVWK-AGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHP 106
+VW G L+GH +V ++ S L +A+ S D T++LW F E +
Sbjct: 133 KVWDYETGDFERTLKGHTDSVEDISFDHSGKL----LASCSADMTIKLWDFQGFECI--- 185
Query: 107 KKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGN 166
+ + GH +V S+A +G+ + S S D TI +W + R+
Sbjct: 186 ------RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCV--KTFTGHREWV 237
Query: 167 NQVEEPQLEGEAISTLVGHTQCVSS-VVWPQQETIYSASWDHSVR--TWDVEMGKDLSDI 223
V P +G I++ + Q V VV ++ +H V +W E S I
Sbjct: 238 RMVR-PNQDGTLIASC-SNDQTVRVWVVATKECKAELREHEHVVECISWAPE--SSYSSI 293
Query: 224 FCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNK 283
G G L++ G D +++WD T + H++W+ +H+
Sbjct: 294 SEATGSETKKSGKPGPFLLS-GSRDKTIKMWDV---STGMCLMTLVGHDNWVRGVLFHSG 349
Query: 284 SWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKLCV 340
F ++S + D + +WD + + +++H+ V D+ + V++G VD + V
Sbjct: 350 GKF-ILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 121 (47.7 bits), Expect = 0.00015, P = 0.00015
Identities = 41/160 (25%), Positives = 75/160 (46%)
Query: 161 KKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKD 219
+KR + P E A+S GH V+ V++ P + SAS D +++ WD E G D
Sbjct: 87 QKRDPKEWIPRPP-EKYALS---GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-D 141
Query: 220 LSDIFCGKALNCIDIGGEGSA-LIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISAC 278
G + DI + S L+A+ +D +++WD + G + H+ +S+
Sbjct: 142 FERTLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQ--GFEC-IRTMHGHDHNVSSV 198
Query: 279 KWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKV 318
H++SAS D + +W+++T + + H++ V
Sbjct: 199 AIMPNG-DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWV 237
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 162 (62.1 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 68/298 (22%), Positives = 123/298 (41%)
Query: 48 RVWK-AGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHP 106
+VW G L+GH +V ++ S L +A+ S D T++LW F E +
Sbjct: 133 KVWDYETGDFERTLKGHTDSVQDISFDHSGKL----LASCSADMTIKLWDFQGFECI--- 185
Query: 107 KKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGN 166
+ + GH +V S+A +G+ + S S D TI +W + R+
Sbjct: 186 ------RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCV--KTFTGHREWV 237
Query: 167 NQVEEPQLEGEAISTLVGHTQCVSS-VVWPQQETIYSASWDHSVR--TWDVEMGKDLSDI 223
V P +G I++ + Q V VV ++ +H V +W E S I
Sbjct: 238 RMVR-PNQDGTLIASC-SNDQTVRVWVVATKECKAELREHEHVVECISWAPE--SSYSSI 293
Query: 224 FCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNK 283
G G L++ G D +++WD T + H++W+ +H+
Sbjct: 294 SEATGSETKKSGKPGPFLLS-GSRDKTIKMWDV---STGMCLMTLVGHDNWVRGVLFHSG 349
Query: 284 SWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKLCV 340
F ++S + D + +WD + + +++H+ V D+ + V++G VD + V
Sbjct: 350 GKF-ILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 121 (47.7 bits), Expect = 0.00015, P = 0.00015
Identities = 41/160 (25%), Positives = 75/160 (46%)
Query: 161 KKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKD 219
+KR + P E A+S GH V+ V++ P + SAS D +++ WD E G D
Sbjct: 87 QKRDPKEWIPRPP-EKYALS---GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-D 141
Query: 220 LSDIFCGKALNCIDIGGEGSA-LIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISAC 278
G + DI + S L+A+ +D +++WD + G + H+ +S+
Sbjct: 142 FERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ--GFEC-IRTMHGHDHNVSSV 198
Query: 279 KWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKV 318
H++SAS D + +W+++T + + H++ V
Sbjct: 199 AIMPNG-DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWV 237
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 162 (62.1 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 68/298 (22%), Positives = 123/298 (41%)
Query: 48 RVWK-AGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHP 106
+VW G L+GH +V ++ S L +A+ S D T++LW F E +
Sbjct: 133 KVWDYETGDFERTLKGHTDSVQDISFDHSGKL----LASCSADMTIKLWDFQGFECI--- 185
Query: 107 KKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGN 166
+ + GH +V S+A +G+ + S S D TI +W + R+
Sbjct: 186 ------RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCV--KTFTGHREWV 237
Query: 167 NQVEEPQLEGEAISTLVGHTQCVSS-VVWPQQETIYSASWDHSVR--TWDVEMGKDLSDI 223
V P +G I++ + Q V VV ++ +H V +W E S I
Sbjct: 238 RMVR-PNQDGTLIASC-SNDQTVRVWVVATKECKAELREHEHVVECISWAPE--SSYSSI 293
Query: 224 FCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNK 283
G G L++ G D +++WD T + H++W+ +H+
Sbjct: 294 SEATGSETKKSGKPGPFLLS-GSRDKTIKMWDV---STGMCLMTLVGHDNWVRGVLFHSG 349
Query: 284 SWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKLCV 340
F ++S + D + +WD + + +++H+ V D+ + V++G VD + V
Sbjct: 350 GKF-ILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 121 (47.7 bits), Expect = 0.00015, P = 0.00015
Identities = 41/160 (25%), Positives = 75/160 (46%)
Query: 161 KKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKD 219
+KR + P E A+S GH V+ V++ P + SAS D +++ WD E G D
Sbjct: 87 QKRDPKEWIPRPP-EKYALS---GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-D 141
Query: 220 LSDIFCGKALNCIDIGGEGSA-LIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISAC 278
G + DI + S L+A+ +D +++WD + G + H+ +S+
Sbjct: 142 FERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ--GFEC-IRTMHGHDHNVSSV 198
Query: 279 KWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKV 318
H++SAS D + +W+++T + + H++ V
Sbjct: 199 AIMPNG-DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWV 237
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 162 (62.1 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 68/298 (22%), Positives = 123/298 (41%)
Query: 48 RVWK-AGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHP 106
+VW G L+GH +V ++ S L +A+ S D T++LW F E +
Sbjct: 133 KVWDYETGDFERTLKGHTDSVQDISFDHSGKL----LASCSADMTIKLWDFQGFECI--- 185
Query: 107 KKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGN 166
+ + GH +V S+A +G+ + S S D TI +W + R+
Sbjct: 186 ------RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCV--KTFTGHREWV 237
Query: 167 NQVEEPQLEGEAISTLVGHTQCVSS-VVWPQQETIYSASWDHSVR--TWDVEMGKDLSDI 223
V P +G I++ + Q V VV ++ +H V +W E S I
Sbjct: 238 RMVR-PNQDGTLIASC-SNDQTVRVWVVATKECKAELREHEHVVECISWAPE--SSYSSI 293
Query: 224 FCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNK 283
G G L++ G D +++WD T + H++W+ +H+
Sbjct: 294 SEATGSETKKSGKPGPFLLS-GSRDKTIKMWDV---STGMCLMTLVGHDNWVRGVLFHSG 349
Query: 284 SWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKLCV 340
F ++S + D + +WD + + +++H+ V D+ + V++G VD + V
Sbjct: 350 GKF-ILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 121 (47.7 bits), Expect = 0.00015, P = 0.00015
Identities = 41/160 (25%), Positives = 75/160 (46%)
Query: 161 KKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKD 219
+KR + P E A+S GH V+ V++ P + SAS D +++ WD E G D
Sbjct: 87 QKRDPKEWIPRPP-EKYALS---GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-D 141
Query: 220 LSDIFCGKALNCIDIGGEGSA-LIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISAC 278
G + DI + S L+A+ +D +++WD + G + H+ +S+
Sbjct: 142 FERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ--GFEC-IRTMHGHDHNVSSV 198
Query: 279 KWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKV 318
H++SAS D + +W+++T + + H++ V
Sbjct: 199 AIMPNG-DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWV 237
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 162 (62.1 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 68/298 (22%), Positives = 123/298 (41%)
Query: 48 RVWK-AGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHP 106
+VW G L+GH +V ++ S L +A+ S D T++LW F E +
Sbjct: 133 KVWDYETGDFERTLKGHTDSVQDISFDHSGKL----LASCSADMTIKLWDFQGFECI--- 185
Query: 107 KKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGN 166
+ + GH +V S+A +G+ + S S D TI +W + R+
Sbjct: 186 ------RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCV--KTFTGHREWV 237
Query: 167 NQVEEPQLEGEAISTLVGHTQCVSS-VVWPQQETIYSASWDHSVR--TWDVEMGKDLSDI 223
V P +G I++ + Q V VV ++ +H V +W E S I
Sbjct: 238 RMVR-PNQDGTLIASC-SNDQTVRVWVVATKECKAELREHEHVVECISWAPE--SSYSSI 293
Query: 224 FCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNK 283
G G L++ G D +++WD T + H++W+ +H+
Sbjct: 294 SEATGSETKKSGKPGPFLLS-GSRDKTIKMWDV---STGMCLMTLVGHDNWVRGVLFHSG 349
Query: 284 SWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKLCV 340
F ++S + D + +WD + + +++H+ V D+ + V++G VD + V
Sbjct: 350 GKF-ILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 121 (47.7 bits), Expect = 0.00015, P = 0.00015
Identities = 41/160 (25%), Positives = 75/160 (46%)
Query: 161 KKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKD 219
+KR + P E A+S GH V+ V++ P + SAS D +++ WD E G D
Sbjct: 87 QKRDPKEWIPRPP-EKYALS---GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-D 141
Query: 220 LSDIFCGKALNCIDIGGEGSA-LIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISAC 278
G + DI + S L+A+ +D +++WD + G + H+ +S+
Sbjct: 142 FERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ--GFEC-IRTMHGHDHNVSSV 198
Query: 279 KWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKV 318
H++SAS D + +W+++T + + H++ V
Sbjct: 199 AIMPNG-DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWV 237
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 162 (62.1 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 68/298 (22%), Positives = 123/298 (41%)
Query: 48 RVWK-AGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHP 106
+VW G L+GH +V ++ S L +A+ S D T++LW F E +
Sbjct: 133 KVWDYETGDFERTLKGHTDSVQDISFDHSGKL----LASCSADMTIKLWDFQGFECI--- 185
Query: 107 KKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGN 166
+ + GH +V S+A +G+ + S S D TI +W + R+
Sbjct: 186 ------RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCV--KTFTGHREWV 237
Query: 167 NQVEEPQLEGEAISTLVGHTQCVSS-VVWPQQETIYSASWDHSVR--TWDVEMGKDLSDI 223
V P +G I++ + Q V VV ++ +H V +W E S I
Sbjct: 238 RMVR-PNQDGTLIASC-SNDQTVRVWVVATKECKAELREHEHVVECISWAPE--SSYSSI 293
Query: 224 FCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNK 283
G G L++ G D +++WD T + H++W+ +H+
Sbjct: 294 SEATGSETKKSGKPGPFLLS-GSRDKTIKMWDV---STGMCLMTLVGHDNWVRGVLFHSG 349
Query: 284 SWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKLCV 340
F ++S + D + +WD + + +++H+ V D+ + V++G VD + V
Sbjct: 350 GKF-ILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 121 (47.7 bits), Expect = 0.00015, P = 0.00015
Identities = 41/160 (25%), Positives = 75/160 (46%)
Query: 161 KKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKD 219
+KR + P E A+S GH V+ V++ P + SAS D +++ WD E G D
Sbjct: 87 QKRDPKEWIPRPP-EKYALS---GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-D 141
Query: 220 LSDIFCGKALNCIDIGGEGSA-LIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISAC 278
G + DI + S L+A+ +D +++WD + G + H+ +S+
Sbjct: 142 FERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ--GFEC-IRTMHGHDHNVSSV 198
Query: 279 KWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKV 318
H++SAS D + +W+++T + + H++ V
Sbjct: 199 AIMPNG-DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWV 237
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 162 (62.1 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 68/298 (22%), Positives = 123/298 (41%)
Query: 48 RVWK-AGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHP 106
+VW G L+GH +V ++ S L +A+ S D T++LW F E +
Sbjct: 133 KVWDYETGDFERTLKGHTDSVQDISFDHSGKL----LASCSADMTIKLWDFQGFECI--- 185
Query: 107 KKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGN 166
+ + GH +V S+A +G+ + S S D TI +W + R+
Sbjct: 186 ------RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCV--KTFTGHREWV 237
Query: 167 NQVEEPQLEGEAISTLVGHTQCVSS-VVWPQQETIYSASWDHSVR--TWDVEMGKDLSDI 223
V P +G I++ + Q V VV ++ +H V +W E S I
Sbjct: 238 RMVR-PNQDGTLIASC-SNDQTVRVWVVATKECKAELREHEHVVECISWAPE--SSYSSI 293
Query: 224 FCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNK 283
G G L++ G D +++WD T + H++W+ +H+
Sbjct: 294 SEATGSETKKSGKPGPFLLS-GSRDKTIKMWDV---STGMCLMTLVGHDNWVRGVLFHSG 349
Query: 284 SWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKLCV 340
F ++S + D + +WD + + +++H+ V D+ + V++G VD + V
Sbjct: 350 GKF-ILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 121 (47.7 bits), Expect = 0.00015, P = 0.00015
Identities = 41/160 (25%), Positives = 75/160 (46%)
Query: 161 KKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKD 219
+KR + P E A+S GH V+ V++ P + SAS D +++ WD E G D
Sbjct: 87 QKRDPKEWIPRPP-EKYALS---GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-D 141
Query: 220 LSDIFCGKALNCIDIGGEGSA-LIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISAC 278
G + DI + S L+A+ +D +++WD + G + H+ +S+
Sbjct: 142 FERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ--GFEC-IRTMHGHDHNVSSV 198
Query: 279 KWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKV 318
H++SAS D + +W+++T + + H++ V
Sbjct: 199 AIMPNG-DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWV 237
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 162 (62.1 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 68/298 (22%), Positives = 123/298 (41%)
Query: 48 RVWK-AGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHP 106
+VW G L+GH +V ++ S L +A+ S D T++LW F E +
Sbjct: 133 KVWDYETGDFERTLKGHTDSVQDISFDHSGKL----LASCSADMTIKLWDFQGFECI--- 185
Query: 107 KKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGN 166
+ + GH +V S+A +G+ + S S D TI +W + R+
Sbjct: 186 ------RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCV--KTFTGHREWV 237
Query: 167 NQVEEPQLEGEAISTLVGHTQCVSS-VVWPQQETIYSASWDHSVR--TWDVEMGKDLSDI 223
V P +G I++ + Q V VV ++ +H V +W E S I
Sbjct: 238 RMVR-PNQDGTLIASC-SNDQTVRVWVVATKECKAELREHEHVVECISWAPE--SSYSSI 293
Query: 224 FCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNK 283
G G L++ G D +++WD T + H++W+ +H+
Sbjct: 294 SEATGSETKKSGKPGPFLLS-GSRDKTIKMWDV---STGMCLMTLVGHDNWVRGVLFHSG 349
Query: 284 SWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKLCV 340
F ++S + D + +WD + + +++H+ V D+ + V++G VD + V
Sbjct: 350 GKF-ILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 121 (47.7 bits), Expect = 0.00015, P = 0.00015
Identities = 41/160 (25%), Positives = 75/160 (46%)
Query: 161 KKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKD 219
+KR + P E A+S GH V+ V++ P + SAS D +++ WD E G D
Sbjct: 87 QKRDPKEWIPRPP-EKYALS---GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-D 141
Query: 220 LSDIFCGKALNCIDIGGEGSA-LIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISAC 278
G + DI + S L+A+ +D +++WD + G + H+ +S+
Sbjct: 142 FERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ--GFEC-IRTMHGHDHNVSSV 198
Query: 279 KWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKV 318
H++SAS D + +W+++T + + H++ V
Sbjct: 199 AIMPNG-DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWV 237
>UNIPROTKB|F2Z4M0 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0016589 "NURF complex"
evidence=IEA] [GO:0031497 "chromatin assembly" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0035098 "ESC/E(Z)
complex" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 IPI:IPI00592914
EMBL:AADN02043764 ProteinModelPortal:F2Z4M0 SMR:F2Z4M0 PRIDE:F2Z4M0
Ensembl:ENSGALT00000005575 Uniprot:F2Z4M0
Length = 425
Score = 162 (62.1 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 53/172 (30%), Positives = 74/172 (43%)
Query: 182 LVGHTQCVSSVVW-PQQET-IYSASWDHSVRTWDVEM----GK--DLSDIFCGKALNCID 233
L GH + + W P + SAS DH++ WD+ GK D IF G D
Sbjct: 173 LRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVED 232
Query: 234 IGGE--GSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291
+ +L + D L IWD R TS P +H + ++ ++ S F L +
Sbjct: 233 VSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATG 292
Query: 292 SYDGKVMLWDLRTA-WPLSVIDSHKDKVLCADWWRGDSVI--SGGVDSKLCV 340
S D V LWDLR L +SHKD++ W + I S G D +L V
Sbjct: 293 SADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNV 344
Score = 125 (49.1 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 51/198 (25%), Positives = 85/198 (42%)
Query: 115 LRGHKASVHSIA--AETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEP 172
LRGH+ + ++ SG+++ S S D TI LW +S ++G
Sbjct: 173 LRGHQKEGYGLSWNPNLSGHLL-SASDDHTICLW----------DISAVPKEGK------ 215
Query: 173 QLEGEAISTLVGHTQCVSSVVWPQ-QETIY-SASWDHSVRTWDVEMG---KDLSDIFCGK 227
++ + I T GHT V V W E+++ S + D + WD K +
Sbjct: 216 VVDAKTIFT--GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHT 273
Query: 228 A-LNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKW--HNKS 284
A +NC+ ++A G +D + +WD R + F SH I +W HN++
Sbjct: 274 AEVNCLSFNPYSEFILATGSADKTVALWDLRN--LKLKLHSFESHKDEIFQVQWSPHNET 331
Query: 285 WFHLISASYDGKVMLWDL 302
L S+ D ++ +WDL
Sbjct: 332 I--LASSGTDRRLNVWDL 347
>UNIPROTKB|Q9W7I5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0033186
"CAF-1 complex" evidence=ISS] [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006338
"chromatin remodeling" evidence=ISS] [GO:0008094 "DNA-dependent
ATPase activity" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 CTD:5928
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:AF097750 IPI:IPI00592914
RefSeq:NP_990183.1 UniGene:Gga.1029 ProteinModelPortal:Q9W7I5
SMR:Q9W7I5 STRING:Q9W7I5 PRIDE:Q9W7I5 GeneID:395658 KEGG:gga:395658
InParanoid:Q9W7I5 NextBio:20815730 Uniprot:Q9W7I5
Length = 425
Score = 162 (62.1 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 53/172 (30%), Positives = 74/172 (43%)
Query: 182 LVGHTQCVSSVVW-PQQET-IYSASWDHSVRTWDVEM----GK--DLSDIFCGKALNCID 233
L GH + + W P + SAS DH++ WD+ GK D IF G D
Sbjct: 173 LRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVED 232
Query: 234 IGGE--GSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291
+ +L + D L IWD R TS P +H + ++ ++ S F L +
Sbjct: 233 VSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATG 292
Query: 292 SYDGKVMLWDLRTA-WPLSVIDSHKDKVLCADWWRGDSVI--SGGVDSKLCV 340
S D V LWDLR L +SHKD++ W + I S G D +L V
Sbjct: 293 SADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNV 344
Score = 125 (49.1 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 51/198 (25%), Positives = 85/198 (42%)
Query: 115 LRGHKASVHSIA--AETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEP 172
LRGH+ + ++ SG+++ S S D TI LW +S ++G
Sbjct: 173 LRGHQKEGYGLSWNPNLSGHLL-SASDDHTICLW----------DISAVPKEGK------ 215
Query: 173 QLEGEAISTLVGHTQCVSSVVWPQ-QETIY-SASWDHSVRTWDVEMG---KDLSDIFCGK 227
++ + I T GHT V V W E+++ S + D + WD K +
Sbjct: 216 VVDAKTIFT--GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHT 273
Query: 228 A-LNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKW--HNKS 284
A +NC+ ++A G +D + +WD R + F SH I +W HN++
Sbjct: 274 AEVNCLSFNPYSEFILATGSADKTVALWDLRN--LKLKLHSFESHKDEIFQVQWSPHNET 331
Query: 285 WFHLISASYDGKVMLWDL 302
L S+ D ++ +WDL
Sbjct: 332 I--LASSGTDRRLNVWDL 347
>UNIPROTKB|Q3MHL3 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9913
"Bos taurus" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0006338 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
OMA:CQPDLRL GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0008094 HOGENOM:HOG000160330 EMBL:BT030530 EMBL:BC105195
IPI:IPI00717704 RefSeq:NP_001070481.1 UniGene:Bt.101874
ProteinModelPortal:Q3MHL3 SMR:Q3MHL3 STRING:Q3MHL3 PRIDE:Q3MHL3
Ensembl:ENSBTAT00000007758 GeneID:767940 KEGG:bta:767940 CTD:5928
HOVERGEN:HBG053236 InParanoid:Q3MHL3 OrthoDB:EOG4DBTDH
NextBio:20918297 Uniprot:Q3MHL3
Length = 425
Score = 162 (62.1 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 53/172 (30%), Positives = 74/172 (43%)
Query: 182 LVGHTQCVSSVVW-PQQET-IYSASWDHSVRTWDVEM----GK--DLSDIFCGKALNCID 233
L GH + + W P + SAS DH++ WD+ GK D IF G D
Sbjct: 173 LRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVED 232
Query: 234 IGGE--GSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291
+ +L + D L IWD R TS P +H + ++ ++ S F L +
Sbjct: 233 VSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATG 292
Query: 292 SYDGKVMLWDLRTA-WPLSVIDSHKDKVLCADWWRGDSVI--SGGVDSKLCV 340
S D V LWDLR L +SHKD++ W + I S G D +L V
Sbjct: 293 SADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNV 344
Score = 125 (49.1 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 51/198 (25%), Positives = 85/198 (42%)
Query: 115 LRGHKASVHSIA--AETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEP 172
LRGH+ + ++ SG+++ S S D TI LW +S ++G
Sbjct: 173 LRGHQKEGYGLSWNPNLSGHLL-SASDDHTICLW----------DISAVPKEGK------ 215
Query: 173 QLEGEAISTLVGHTQCVSSVVWPQ-QETIY-SASWDHSVRTWDVEMG---KDLSDIFCGK 227
++ + I T GHT V V W E+++ S + D + WD K +
Sbjct: 216 VVDAKTIFT--GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHT 273
Query: 228 A-LNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKW--HNKS 284
A +NC+ ++A G +D + +WD R + F SH I +W HN++
Sbjct: 274 AEVNCLSFNPYSEFILATGSADKTVALWDLRN--LKLKLHSFESHKDEIFQVQWSPHNET 331
Query: 285 WFHLISASYDGKVMLWDL 302
L S+ D ++ +WDL
Sbjct: 332 I--LASSGTDRRLNVWDL 347
>UNIPROTKB|E2QXR8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0031497 "chromatin
assembly" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 CTD:5928
EMBL:AAEX03001654 RefSeq:XP_864445.1 ProteinModelPortal:E2QXR8
SMR:E2QXR8 PRIDE:E2QXR8 Ensembl:ENSCAFT00000016755 GeneID:478149
KEGG:cfa:478149 NextBio:20853518 Uniprot:E2QXR8
Length = 425
Score = 162 (62.1 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 53/172 (30%), Positives = 74/172 (43%)
Query: 182 LVGHTQCVSSVVW-PQQET-IYSASWDHSVRTWDVEM----GK--DLSDIFCGKALNCID 233
L GH + + W P + SAS DH++ WD+ GK D IF G D
Sbjct: 173 LRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVED 232
Query: 234 IGGE--GSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291
+ +L + D L IWD R TS P +H + ++ ++ S F L +
Sbjct: 233 VSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATG 292
Query: 292 SYDGKVMLWDLRTA-WPLSVIDSHKDKVLCADWWRGDSVI--SGGVDSKLCV 340
S D V LWDLR L +SHKD++ W + I S G D +L V
Sbjct: 293 SADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNV 344
Score = 125 (49.1 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 51/198 (25%), Positives = 85/198 (42%)
Query: 115 LRGHKASVHSIA--AETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEP 172
LRGH+ + ++ SG+++ S S D TI LW +S ++G
Sbjct: 173 LRGHQKEGYGLSWNPNLSGHLL-SASDDHTICLW----------DISAVPKEGK------ 215
Query: 173 QLEGEAISTLVGHTQCVSSVVWPQ-QETIY-SASWDHSVRTWDVEMG---KDLSDIFCGK 227
++ + I T GHT V V W E+++ S + D + WD K +
Sbjct: 216 VVDAKTIFT--GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHT 273
Query: 228 A-LNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKW--HNKS 284
A +NC+ ++A G +D + +WD R + F SH I +W HN++
Sbjct: 274 AEVNCLSFNPYSEFILATGSADKTVALWDLRN--LKLKLHSFESHKDEIFQVQWSPHNET 331
Query: 285 WFHLISASYDGKVMLWDL 302
L S+ D ++ +WDL
Sbjct: 332 I--LASSGTDRRLNVWDL 347
>UNIPROTKB|Q09028 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=NAS;IDA] [GO:0016589 "NURF
complex" evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0033186 "CAF-1 complex" evidence=IDA] [GO:0031497 "chromatin
assembly" evidence=IDA] [GO:0008285 "negative regulation of cell
proliferation" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IDA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IDA] [GO:0000278 "mitotic
cell cycle" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006334 "nucleosome assembly" evidence=TAS] [GO:0034080 "CENP-A
containing nucleosome assembly at centromere" evidence=TAS]
[GO:0016580 "Sin3 complex" evidence=NAS] [GO:0042393 "histone
binding" evidence=NAS] [GO:0042826 "histone deacetylase binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Pathway_Interaction_DB:telomerasepathway
Reactome:REACT_115566 GO:GO:0008285 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH471059 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035098
GO:GO:0042393 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0000278
GO:GO:0016589 GO:GO:0033186 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0016580 PDB:2XU7 PDBsum:2XU7
CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:X74262
EMBL:X71810 EMBL:BT007309 EMBL:AK299251 EMBL:AK312571 EMBL:AK222779
EMBL:AC114489 EMBL:BC003092 EMBL:BC015123 EMBL:BC053904
EMBL:BC075836 IPI:IPI00328319 IPI:IPI00645329 IPI:IPI00877802
IPI:IPI00877934 PIR:S36112 RefSeq:NP_001128727.1
RefSeq:NP_001128728.1 RefSeq:NP_005601.1 UniGene:Hs.16003 PDB:3GFC
PDBsum:3GFC ProteinModelPortal:Q09028 SMR:Q09028 DIP:DIP-33495N
IntAct:Q09028 MINT:MINT-90543 STRING:Q09028 PhosphoSite:Q09028
DMDM:1172846 PaxDb:Q09028 PRIDE:Q09028 DNASU:5928
Ensembl:ENST00000373485 Ensembl:ENST00000373493
Ensembl:ENST00000414241 Ensembl:ENST00000458695 GeneID:5928
KEGG:hsa:5928 UCSC:uc001bvr.3 UCSC:uc001bvs.3 GeneCards:GC01P033116
HGNC:HGNC:9887 HPA:CAB006264 MIM:602923 neXtProt:NX_Q09028
PharmGKB:PA34251 InParanoid:Q09028 PhylomeDB:Q09028 ChiTaRS:RBBP4
EvolutionaryTrace:Q09028 GenomeRNAi:5928 NextBio:23094
ArrayExpress:Q09028 Bgee:Q09028 CleanEx:HS_RBBP4
Genevestigator:Q09028 GermOnline:ENSG00000162521 Uniprot:Q09028
Length = 425
Score = 162 (62.1 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 53/172 (30%), Positives = 74/172 (43%)
Query: 182 LVGHTQCVSSVVW-PQQET-IYSASWDHSVRTWDVEM----GK--DLSDIFCGKALNCID 233
L GH + + W P + SAS DH++ WD+ GK D IF G D
Sbjct: 173 LRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVED 232
Query: 234 IGGE--GSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291
+ +L + D L IWD R TS P +H + ++ ++ S F L +
Sbjct: 233 VSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATG 292
Query: 292 SYDGKVMLWDLRTA-WPLSVIDSHKDKVLCADWWRGDSVI--SGGVDSKLCV 340
S D V LWDLR L +SHKD++ W + I S G D +L V
Sbjct: 293 SADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNV 344
Score = 125 (49.1 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 51/198 (25%), Positives = 85/198 (42%)
Query: 115 LRGHKASVHSIA--AETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEP 172
LRGH+ + ++ SG+++ S S D TI LW +S ++G
Sbjct: 173 LRGHQKEGYGLSWNPNLSGHLL-SASDDHTICLW----------DISAVPKEGK------ 215
Query: 173 QLEGEAISTLVGHTQCVSSVVWPQ-QETIY-SASWDHSVRTWDVEMG---KDLSDIFCGK 227
++ + I T GHT V V W E+++ S + D + WD K +
Sbjct: 216 VVDAKTIFT--GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHT 273
Query: 228 A-LNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKW--HNKS 284
A +NC+ ++A G +D + +WD R + F SH I +W HN++
Sbjct: 274 AEVNCLSFNPYSEFILATGSADKTVALWDLRN--LKLKLHSFESHKDEIFQVQWSPHNET 331
Query: 285 WFHLISASYDGKVMLWDL 302
L S+ D ++ +WDL
Sbjct: 332 I--LASSGTDRRLNVWDL 347
>UNIPROTKB|Q5RF92 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9601
"Pongo abelii" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 CTD:5928 HOVERGEN:HBG053236
EMBL:CR857269 RefSeq:NP_001124686.1 UniGene:Pab.10290
UniGene:Pab.17706 ProteinModelPortal:Q5RF92 SMR:Q5RF92
GeneID:100461561 KEGG:pon:100461561 InParanoid:Q5RF92
Uniprot:Q5RF92
Length = 425
Score = 162 (62.1 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 53/172 (30%), Positives = 74/172 (43%)
Query: 182 LVGHTQCVSSVVW-PQQET-IYSASWDHSVRTWDVEM----GK--DLSDIFCGKALNCID 233
L GH + + W P + SAS DH++ WD+ GK D IF G D
Sbjct: 173 LRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVED 232
Query: 234 IGGE--GSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291
+ +L + D L IWD R TS P +H + ++ ++ S F L +
Sbjct: 233 VSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATG 292
Query: 292 SYDGKVMLWDLRTA-WPLSVIDSHKDKVLCADWWRGDSVI--SGGVDSKLCV 340
S D V LWDLR L +SHKD++ W + I S G D +L V
Sbjct: 293 SADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNV 344
Score = 125 (49.1 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 51/198 (25%), Positives = 85/198 (42%)
Query: 115 LRGHKASVHSIA--AETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEP 172
LRGH+ + ++ SG+++ S S D TI LW +S ++G
Sbjct: 173 LRGHQKEGYGLSWNPNLSGHLL-SASDDHTICLW----------DISAVPKEGK------ 215
Query: 173 QLEGEAISTLVGHTQCVSSVVWPQ-QETIY-SASWDHSVRTWDVEMG---KDLSDIFCGK 227
++ + I T GHT V V W E+++ S + D + WD K +
Sbjct: 216 VVDAKTIFT--GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHT 273
Query: 228 A-LNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKW--HNKS 284
A +NC+ ++A G +D + +WD R + F SH I +W HN++
Sbjct: 274 AEVNCLSFNPYSEFILATGSADKTVALWDLRN--LKLKLHSFESHKDEIFQVQWSPHNET 331
Query: 285 WFHLISASYDGKVMLWDL 302
L S+ D ++ +WDL
Sbjct: 332 I--LASSGTDRRLNVWDL 347
>MGI|MGI:1194912 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4"
species:10090 "Mus musculus" [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=ISO;TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=ISO;IDA] [GO:0016589 "NURF complex" evidence=ISO]
[GO:0031497 "chromatin assembly" evidence=ISO] [GO:0033186 "CAF-1
complex" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO;IDA] [GO:0042826 "histone deacetylase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1194912 EMBL:CH466552 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 EMBL:AL607123 GO:GO:0016589
GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH
EMBL:U35141 EMBL:CU234133 EMBL:BC138568 EMBL:BC138570
IPI:IPI00828412 PIR:I49366 RefSeq:NP_033056.2 UniGene:Mm.12145
ProteinModelPortal:Q60972 SMR:Q60972 DIP:DIP-32855N IntAct:Q60972
STRING:Q60972 PhosphoSite:Q60972 REPRODUCTION-2DPAGE:Q60972
PaxDb:Q60972 PRIDE:Q60972 Ensembl:ENSMUST00000102598 GeneID:19646
KEGG:mmu:19646 InParanoid:A2A875 NextBio:296894 Bgee:Q60972
CleanEx:MM_RBBP4 Genevestigator:Q60972
GermOnline:ENSMUSG00000057236 Uniprot:Q60972
Length = 425
Score = 162 (62.1 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 53/172 (30%), Positives = 74/172 (43%)
Query: 182 LVGHTQCVSSVVW-PQQET-IYSASWDHSVRTWDVEM----GK--DLSDIFCGKALNCID 233
L GH + + W P + SAS DH++ WD+ GK D IF G D
Sbjct: 173 LRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVED 232
Query: 234 IGGE--GSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291
+ +L + D L IWD R TS P +H + ++ ++ S F L +
Sbjct: 233 VSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATG 292
Query: 292 SYDGKVMLWDLRTA-WPLSVIDSHKDKVLCADWWRGDSVI--SGGVDSKLCV 340
S D V LWDLR L +SHKD++ W + I S G D +L V
Sbjct: 293 SADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNV 344
Score = 125 (49.1 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 51/198 (25%), Positives = 85/198 (42%)
Query: 115 LRGHKASVHSIA--AETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEP 172
LRGH+ + ++ SG+++ S S D TI LW +S ++G
Sbjct: 173 LRGHQKEGYGLSWNPNLSGHLL-SASDDHTICLW----------DISAVPKEGK------ 215
Query: 173 QLEGEAISTLVGHTQCVSSVVWPQ-QETIY-SASWDHSVRTWDVEMG---KDLSDIFCGK 227
++ + I T GHT V V W E+++ S + D + WD K +
Sbjct: 216 VVDAKTIFT--GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHT 273
Query: 228 A-LNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKW--HNKS 284
A +NC+ ++A G +D + +WD R + F SH I +W HN++
Sbjct: 274 AEVNCLSFNPYSEFILATGSADKTVALWDLRN--LKLKLHSFESHKDEIFQVQWSPHNET 331
Query: 285 WFHLISASYDGKVMLWDL 302
L S+ D ++ +WDL
Sbjct: 332 I--LASSGTDRRLNVWDL 347
>RGD|1593768 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=IEA;ISO] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA;ISO] [GO:0016581 "NuRD complex"
evidence=IEA;ISO] [GO:0016589 "NURF complex" evidence=IEA;ISO]
[GO:0031497 "chromatin assembly" evidence=IEA;ISO] [GO:0033186
"CAF-1 complex" evidence=IEA;ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=IEA;ISO] [GO:0042826 "histone deacetylase binding"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1593768 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
EMBL:CH473968 HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC168994 IPI:IPI00366789
RefSeq:NP_001101382.1 UniGene:Rn.224577 SMR:B5DFB2 STRING:B5DFB2
Ensembl:ENSRNOT00000029177 GeneID:313048 KEGG:rno:313048
NextBio:665530 Genevestigator:B5DFB2 Uniprot:B5DFB2
Length = 425
Score = 162 (62.1 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 53/172 (30%), Positives = 74/172 (43%)
Query: 182 LVGHTQCVSSVVW-PQQET-IYSASWDHSVRTWDVEM----GK--DLSDIFCGKALNCID 233
L GH + + W P + SAS DH++ WD+ GK D IF G D
Sbjct: 173 LRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVED 232
Query: 234 IGGE--GSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291
+ +L + D L IWD R TS P +H + ++ ++ S F L +
Sbjct: 233 VSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATG 292
Query: 292 SYDGKVMLWDLRTA-WPLSVIDSHKDKVLCADWWRGDSVI--SGGVDSKLCV 340
S D V LWDLR L +SHKD++ W + I S G D +L V
Sbjct: 293 SADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNV 344
Score = 125 (49.1 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 51/198 (25%), Positives = 85/198 (42%)
Query: 115 LRGHKASVHSIA--AETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEP 172
LRGH+ + ++ SG+++ S S D TI LW +S ++G
Sbjct: 173 LRGHQKEGYGLSWNPNLSGHLL-SASDDHTICLW----------DISAVPKEGK------ 215
Query: 173 QLEGEAISTLVGHTQCVSSVVWPQ-QETIY-SASWDHSVRTWDVEMG---KDLSDIFCGK 227
++ + I T GHT V V W E+++ S + D + WD K +
Sbjct: 216 VVDAKTIFT--GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHT 273
Query: 228 A-LNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKW--HNKS 284
A +NC+ ++A G +D + +WD R + F SH I +W HN++
Sbjct: 274 AEVNCLSFNPYSEFILATGSADKTVALWDLRN--LKLKLHSFESHKDEIFQVQWSPHNET 331
Query: 285 WFHLISASYDGKVMLWDL 302
L S+ D ++ +WDL
Sbjct: 332 I--LASSGTDRRLNVWDL 347
>RGD|1359721 [details] [associations]
symbol:Btrc "beta-transducin repeat containing E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000209
"protein polyubiquitination" evidence=IEA;ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;ISO] [GO:0006470
"protein dephosphorylation" evidence=IEA;ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISO]
[GO:0008013 "beta-catenin binding" evidence=IEA;ISO] [GO:0016567
"protein ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA;ISO] [GO:0030163 "protein catabolic
process" evidence=ISO] [GO:0031648 "protein destabilization"
evidence=IEA;ISO] [GO:0033598 "mammary gland epithelial cell
proliferation" evidence=IEA;ISO] [GO:0042753 "positive regulation
of circadian rhythm" evidence=IEA;ISO] [GO:0043122 "regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO] [GO:0045309
"protein phosphorylated amino acid binding" evidence=IEA;ISO]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA;ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA;ISO] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA;ISO]
[GO:0061136 "regulation of proteasomal protein catabolic process"
evidence=IEA;ISO] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 CTD:8945 HOGENOM:HOG000006638 HOVERGEN:HBG002521
KO:K03362 OrthoDB:EOG4F1X2M EMBL:BC085125 IPI:IPI00951294
RefSeq:NP_001007149.2 UniGene:Rn.21800 SMR:Q5U4E5 STRING:Q5U4E5
Ensembl:ENSRNOT00000064259 GeneID:361765 KEGG:rno:361765
UCSC:RGD:1359721 InParanoid:Q5U4E5 NextBio:677539
Genevestigator:Q5U4E5 Uniprot:Q5U4E5
Length = 506
Score = 163 (62.4 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 67/282 (23%), Positives = 123/282 (43%)
Query: 38 ILTGCYDNLGRVW-KAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWK 96
I++G DN ++W K+ C IL GH G SV ++ D + T S D T+R+W
Sbjct: 217 IVSGLRDNTIKIWDKSTLECKRILTGHTG---SVLCLQYDER---VIITGSSDSTVRVWD 270
Query: 97 FDAEELVN----HPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSD 152
+A E++N H + + + G + + +M + D T+
Sbjct: 271 VNAGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDM--ASPTDITLRRVLVGHR- 327
Query: 153 AAGNQVS-----IKKRKGNNQVEEPQLEG-EAISTLVGHTQCVSSVVWPQQETIYSASWD 206
AA N V I G+ ++ E + TL GH + ++ + + + + S S D
Sbjct: 328 AAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY-RDRLVVSGSSD 386
Query: 207 HSVRTWDVEMGKDLSDIFCGKAL-NCIDIGGEGSALIAAGGSDPILRIWD------PRKP 259
+++R WD+E G L + + L CI + I +G D +++WD PR P
Sbjct: 387 NTIRLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLMAALDPRAP 443
Query: 260 GTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWD 301
+ + H+ + ++ F ++S+S+D +++WD
Sbjct: 444 AGTLCLRTLVEHSGRVFRLQFDE---FQIVSSSHDDTILIWD 482
Score = 153 (58.9 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 65/278 (23%), Positives = 120/278 (43%)
Query: 50 WKAGGVCTHILEG-HCGAVSSVNI--IKSDGLKYVTVATASKDQTLRLWKFDAEELVNHP 106
W+ G H L+ HC + +S + ++ D K V+ +D T+++W D L
Sbjct: 187 WRCG---RHSLQRIHCRSETSKGVYCLQYDDQKIVS---GLRDNTIKIW--DKSTL---- 234
Query: 107 KKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQV----SIKK 162
+IL GH SV + + ++ +GS D T+ +W N + + ++
Sbjct: 235 ---ECKRILTGHTGSV--LCLQYDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLH 289
Query: 163 RKGNNQVEEPQLEGEAIST--------------LVGHTQCVSSVVWPQQETIYSASWDHS 208
+ NN + + +I+ LVGH V+ V + + I SAS D +
Sbjct: 290 LRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF-DDKYIVSASGDRT 348
Query: 209 VRTWDVEMGKDLSDIFCGK-ALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQ 267
++ W+ + + + K + C+ L+ +G SD +R+WD + G V +
Sbjct: 349 IKVWNTSTCEFVRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDI-ECGACLRVLE 404
Query: 268 FSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTA 305
H + ++ NK ++S +YDGK+ +WDL A
Sbjct: 405 --GHEELVRCIRFDNK---RIVSGAYDGKIKVWDLMAA 437
Score = 139 (54.0 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 40/169 (23%), Positives = 81/169 (47%)
Query: 176 GEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLS--DIFCGK--ALNC 231
GE ++TL+ H + V + + + + S D S+ WD+ D++ + G A+N
Sbjct: 274 GEMLNTLIHHCEAVLHLRF-NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNV 332
Query: 232 IDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291
+D + +++A G D +++W+ T V + H I+ ++ ++ ++S
Sbjct: 333 VDF--DDKYIVSASG-DRTIKVWNT---STCEFVRTLNGHKRGIACLQYRDRL---VVSG 383
Query: 292 SYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGGVDSKLCV 340
S D + LWD+ L V++ H++ V C + ++SG D K+ V
Sbjct: 384 SSDNTIRLWDIECGACLRVLEGHEELVRCIRF-DNKRIVSGAYDGKIKV 431
>UNIPROTKB|E1BYP4 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001764 "neuron migration" evidence=IEA] [GO:0001958
"endochondral ossification" evidence=IEA] [GO:0005053 "peroxisome
matrix targeting signal-2 binding" evidence=IEA] [GO:0005782
"peroxisomal matrix" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006635 "fatty acid beta-oxidation" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782
GO:GO:0008611 GO:GO:0016558 KO:K13341 OMA:GHEYAVR CTD:5191
GO:GO:0005053 GeneTree:ENSGT00700000104578 EMBL:AADN02025502
EMBL:AADN02025503 IPI:IPI00583820 RefSeq:XP_419724.3
UniGene:Gga.10547 ProteinModelPortal:E1BYP4
Ensembl:ENSGALT00000022499 GeneID:421687 KEGG:gga:421687
Uniprot:E1BYP4
Length = 321
Score = 141 (54.7 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 38/135 (28%), Positives = 59/135 (43%)
Query: 185 HTQCVSSVVWPQ---QETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEG-SA 240
HTQ SV W Q ++ + S SWD + + WD +GK L + + I
Sbjct: 108 HTQEAYSVDWSQTRGEQLVVSGSWDQTAKLWDPAVGKSLRTFKGHEGVIYSTIWSPHIPG 167
Query: 241 LIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLW 300
A+ D LRIWD + PG + +H + I +C W L++ + D + W
Sbjct: 168 CFASASGDQTLRIWDVKAPGVRLVI---PAHQAEILSCDWCKYDENLLVTGAVDCSLKGW 224
Query: 301 DLRTA-WPLSVIDSH 314
DLR P+ ++ H
Sbjct: 225 DLRNVRQPVFILLGH 239
Score = 137 (53.3 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 40/156 (25%), Positives = 69/156 (44%)
Query: 192 VVWPQ--QETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGE---GSALIAAGG 246
V W + + + ++S D S++ WD+ K ++ + G L+ +G
Sbjct: 71 VTWSENNEHVLITSSGDGSLQIWDIAKPKGPLQVYKEHTQEAYSVDWSQTRGEQLVVSGS 130
Query: 247 SDPILRIWDPRKPGTSAPVFQFSSHNSWISACKW--HNKSWFHLISASYDGKVMLWDLRT 304
D ++WDP G S F+ H I + W H F SAS D + +WD++
Sbjct: 131 WDQTAKLWDPAV-GKSLRTFK--GHEGVIYSTIWSPHIPGCF--ASASGDQTLRIWDVKA 185
Query: 305 AWPLSVIDSHKDKVLCADWWRGDS--VISGGVDSKL 338
VI +H+ ++L DW + D +++G VD L
Sbjct: 186 PGVRLVIPAHQAEILSCDWCKYDENLLVTGAVDCSL 221
Score = 125 (49.1 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 47/152 (30%), Positives = 63/152 (41%)
Query: 176 GEAISTLVGHTQCVSSVVW-PQQETIY-SASWDHSVRTWDVEM-GKDLS-DIFCGKALNC 231
G+++ T GH + S +W P + SAS D ++R WDV+ G L + L+C
Sbjct: 143 GKSLRTFKGHEGVIYSTIWSPHIPGCFASASGDQTLRIWDVKAPGVRLVIPAHQAEILSC 202
Query: 232 IDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFH---L 288
D L+ G D L+ WD R PVF H + K+ S FH L
Sbjct: 203 -DWCKYDENLLVTGAVDCSLKGWDLRN--VRQPVFILLGHTYAVRRVKF---SPFHATLL 256
Query: 289 ISASYDGKVMLWDLRTAWPLSVIDSHKDKVLC 320
S SYD V WD PL H + C
Sbjct: 257 ASCSYDFTVRFWDFSKPNPLLETVEHHTEFTC 288
Score = 76 (31.8 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 28/97 (28%), Positives = 48/97 (49%)
Query: 75 SDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIA-AETSGN- 132
S+ ++V + T+S D +L++W + PK ++ + H +S+ ++T G
Sbjct: 74 SENNEHVLI-TSSGDGSLQIWD------IAKPKG--PLQVYKEHTQEAYSVDWSQTRGEQ 124
Query: 133 MVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQV 169
+V SGSWD T LW A G S++ KG+ V
Sbjct: 125 LVVSGSWDQTAKLW----DPAVGK--SLRTFKGHEGV 155
>ZFIN|ZDB-GENE-040426-2903 [details] [associations]
symbol:fbxw11b "F-box and WD-40 domain protein
11b" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-040426-2903 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:BX465186
EMBL:BC056809 IPI:IPI00494842 RefSeq:NP_998669.2 UniGene:Dr.75211
SMR:Q6PGW4 STRING:Q6PGW4 Ensembl:ENSDART00000019252 GeneID:406825
KEGG:dre:406825 CTD:406825 InParanoid:Q6PGW4 NextBio:20818332
Uniprot:Q6PGW4
Length = 527
Score = 163 (62.4 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 70/283 (24%), Positives = 125/283 (44%)
Query: 38 ILTGCYDNLGRVW-KAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWK 96
I++G DN ++W K C IL GH G SV ++ D + T S D T+R+W
Sbjct: 238 IISGLRDNSIKIWDKQTLECLKILTGHTG---SVLCLQYDER---VIVTGSSDSTVRVWD 291
Query: 97 FDAEELVN----HPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSD 152
++ E++N H + + + G + + +M + D ISL R
Sbjct: 292 VNSGEVLNTLIHHNEAVLHLRFCNGLMVTCSKDRSIAVWDM--ASPTD--ISLRRVLVGH 347
Query: 153 -AAGNQVS-----IKKRKGNNQVEEPQLEG-EAISTLVGHTQCVSSVVWPQQETIYSASW 205
AA N V I G+ ++ E + TL GH + ++ + + + + S S
Sbjct: 348 RAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY-RDRLVVSGSS 406
Query: 206 DHSVRTWDVEMGKDLSDIFCGKAL-NCIDIGGEGSALIAAGGSDPILRIWD------PRK 258
D+++R WD+E G L + + L CI + I +G D +++WD PR
Sbjct: 407 DNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLQAALDPRA 463
Query: 259 PGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWD 301
P ++ + H+ + ++ F +IS+S+D +++WD
Sbjct: 464 PASTLCLRTLVEHSGRVFRLQFDE---FQIISSSHDDTILIWD 503
Score = 145 (56.1 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 65/278 (23%), Positives = 118/278 (42%)
Query: 50 WKAGGVCTHILEG-HCGAVSSVNI--IKSDGLKYVTVATASKDQTLRLWKFDAEELVNHP 106
W+ G H L+ C + +S + ++ D K ++ +D ++++W D + L
Sbjct: 208 WRCG---RHNLQRIQCRSENSKGVYCLQYDDEKIIS---GLRDNSIKIW--DKQTL---- 255
Query: 107 KKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAG-----NQVSIK 161
KIL GH SV + + ++ +GS D T+ +W N + N+ +
Sbjct: 256 ---ECLKILTGHTGSV--LCLQYDERVIVTGSSDSTVRVWDVNSGEVLNTLIHHNEAVLH 310
Query: 162 KRKGNNQVEEPQLEGEA----------IS---TLVGHTQCVSSVVWPQQETIYSASWDHS 208
R N + + IS LVGH V+ V + + I SAS D +
Sbjct: 311 LRFCNGLMVTCSKDRSIAVWDMASPTDISLRRVLVGHRAAVNVVDF-DDKYIVSASGDRT 369
Query: 209 VRTWDVEMGKDLSDIFCGK-ALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQ 267
++ W + + + K + C+ L+ +G SD +R+WD + G V +
Sbjct: 370 IKVWSTSTCEFVRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDI-ECGACLRVLE 425
Query: 268 FSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTA 305
H + ++ NK ++S +YDGK+ +WDL+ A
Sbjct: 426 --GHEELVRCIRFDNK---RIVSGAYDGKIKVWDLQAA 458
Score = 140 (54.3 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 41/169 (24%), Positives = 80/169 (47%)
Query: 176 GEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLS--DIFCGK--ALNC 231
GE ++TL+ H + V + + + + S D S+ WD+ D+S + G A+N
Sbjct: 295 GEVLNTLIHHNEAVLHLRFCNGLMV-TCSKDRSIAVWDMASPTDISLRRVLVGHRAAVNV 353
Query: 232 IDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291
+D + +++A G D +++W T V + H I+ ++ ++ ++S
Sbjct: 354 VDF--DDKYIVSASG-DRTIKVWST---STCEFVRTLNGHKRGIACLQYRDRL---VVSG 404
Query: 292 SYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGGVDSKLCV 340
S D + LWD+ L V++ H++ V C + ++SG D K+ V
Sbjct: 405 SSDNTIRLWDIECGACLRVLEGHEELVRCIRF-DNKRIVSGAYDGKIKV 452
>UNIPROTKB|E9PC52 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:AL929302 HGNC:HGNC:9890
ChiTaRS:RBBP7 IPI:IPI00879702 ProteinModelPortal:E9PC52 SMR:E9PC52
PRIDE:E9PC52 Ensembl:ENST00000404022 ArrayExpress:E9PC52
Bgee:E9PC52 Uniprot:E9PC52
Length = 416
Score = 161 (61.7 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 52/172 (30%), Positives = 74/172 (43%)
Query: 182 LVGHTQCVSSVVWPQQET--IYSASWDHSVRTWDVEMGK------DLSDIFCGKALNCID 233
L GH + + W + + SAS DH+V WD+ G D IF G + D
Sbjct: 163 LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVED 222
Query: 234 IGGE--GSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291
+ +L + D L IWD R TS P +H + ++ ++ S F L +
Sbjct: 223 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATG 282
Query: 292 SYDGKVMLWDLRTA-WPLSVIDSHKDKVLCADWWRGDSVI--SGGVDSKLCV 340
S D V LWDLR L +SHKD++ W + I S G D +L V
Sbjct: 283 SADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNV 334
Score = 126 (49.4 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 52/199 (26%), Positives = 82/199 (41%)
Query: 115 LRGHKASVHSIA--AETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEP 172
LRGH+ + ++ + SG+++ S S D T+ LW N G V K
Sbjct: 163 LRGHQKEGYGLSWNSNLSGHLL-SASDDHTVCLWDINAGPKEGKIVDAK----------- 210
Query: 173 QLEGEAISTLVGHTQCVSSVVWPQ-QETIY-SASWDHSVRTWDVEMG-----KDLSDIFC 225
AI T GH+ V V W E+++ S + D + WD L D
Sbjct: 211 -----AIFT--GHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHT 263
Query: 226 GKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKW--HNK 283
+ +NC+ ++A G +D + +WD R + F SH I W HN+
Sbjct: 264 AE-VNCLSFNPYSEFILATGSADKTVALWDLRN--LKLKLHTFESHKDEIFQVHWSPHNE 320
Query: 284 SWFHLISASYDGKVMLWDL 302
+ L S+ D ++ +WDL
Sbjct: 321 TI--LASSGTDRRLNVWDL 337
>UNIPROTKB|K7GRD3 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GeneTree:ENSGT00570000079069 InterPro:IPR022052
Pfam:PF12265 EMBL:CU463287 Ensembl:ENSSSCT00000034836
Uniprot:K7GRD3
Length = 416
Score = 161 (61.7 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 52/172 (30%), Positives = 74/172 (43%)
Query: 182 LVGHTQCVSSVVWPQQET--IYSASWDHSVRTWDVEMGK------DLSDIFCGKALNCID 233
L GH + + W + + SAS DH+V WD+ G D IF G + D
Sbjct: 163 LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVED 222
Query: 234 IGGE--GSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291
+ +L + D L IWD R TS P +H + ++ ++ S F L +
Sbjct: 223 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATG 282
Query: 292 SYDGKVMLWDLRTA-WPLSVIDSHKDKVLCADWWRGDSVI--SGGVDSKLCV 340
S D V LWDLR L +SHKD++ W + I S G D +L V
Sbjct: 283 SADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNV 334
Score = 126 (49.4 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 52/199 (26%), Positives = 82/199 (41%)
Query: 115 LRGHKASVHSIA--AETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEP 172
LRGH+ + ++ + SG+++ S S D T+ LW N G V K
Sbjct: 163 LRGHQKEGYGLSWNSNLSGHLL-SASDDHTVCLWDINAGPKEGKIVDAK----------- 210
Query: 173 QLEGEAISTLVGHTQCVSSVVWPQ-QETIY-SASWDHSVRTWDVEMG-----KDLSDIFC 225
AI T GH+ V V W E+++ S + D + WD L D
Sbjct: 211 -----AIFT--GHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHT 263
Query: 226 GKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKW--HNK 283
+ +NC+ ++A G +D + +WD R + F SH I W HN+
Sbjct: 264 AE-VNCLSFNPYSEFILATGSADKTVALWDLRN--LKLKLHTFESHKDEIFQVHWSPHNE 320
Query: 284 SWFHLISASYDGKVMLWDL 302
+ L S+ D ++ +WDL
Sbjct: 321 TI--LASSGTDRRLNVWDL 337
>UNIPROTKB|Q3SWX8 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9913
"Bos taurus" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0070370
"cellular heat acclimation" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC104613 IPI:IPI00709403
RefSeq:NP_001029810.1 UniGene:Bt.4908 ProteinModelPortal:Q3SWX8
SMR:Q3SWX8 STRING:Q3SWX8 PRIDE:Q3SWX8 Ensembl:ENSBTAT00000029923
GeneID:537402 KEGG:bta:537402 CTD:5931 InParanoid:Q3SWX8 KO:K11659
NextBio:20877129 Uniprot:Q3SWX8
Length = 425
Score = 161 (61.7 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 52/172 (30%), Positives = 74/172 (43%)
Query: 182 LVGHTQCVSSVVWPQQET--IYSASWDHSVRTWDVEMGK------DLSDIFCGKALNCID 233
L GH + + W + + SAS DH+V WD+ G D IF G + D
Sbjct: 172 LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVED 231
Query: 234 IGGE--GSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291
+ +L + D L IWD R TS P +H + ++ ++ S F L +
Sbjct: 232 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATG 291
Query: 292 SYDGKVMLWDLRTA-WPLSVIDSHKDKVLCADWWRGDSVI--SGGVDSKLCV 340
S D V LWDLR L +SHKD++ W + I S G D +L V
Sbjct: 292 SADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNV 343
Score = 126 (49.4 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 52/199 (26%), Positives = 82/199 (41%)
Query: 115 LRGHKASVHSIA--AETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEP 172
LRGH+ + ++ + SG+++ S S D T+ LW N G V K
Sbjct: 172 LRGHQKEGYGLSWNSNLSGHLL-SASDDHTVCLWDINAGPKEGKIVDAK----------- 219
Query: 173 QLEGEAISTLVGHTQCVSSVVWPQ-QETIY-SASWDHSVRTWDVEMG-----KDLSDIFC 225
AI T GH+ V V W E+++ S + D + WD L D
Sbjct: 220 -----AIFT--GHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHT 272
Query: 226 GKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKW--HNK 283
+ +NC+ ++A G +D + +WD R + F SH I W HN+
Sbjct: 273 AE-VNCLSFNPYSEFILATGSADKTVALWDLRN--LKLKLHTFESHKDEIFQVHWSPHNE 329
Query: 284 SWFHLISASYDGKVMLWDL 302
+ L S+ D ++ +WDL
Sbjct: 330 TI--LASSGTDRRLNVWDL 346
>UNIPROTKB|E2RM49 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
CTD:5931 KO:K11659 EMBL:AAEX03026166 RefSeq:XP_857851.1
ProteinModelPortal:E2RM49 Ensembl:ENSCAFT00000020249 GeneID:480854
KEGG:cfa:480854 NextBio:20855780 Uniprot:E2RM49
Length = 425
Score = 161 (61.7 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 52/172 (30%), Positives = 74/172 (43%)
Query: 182 LVGHTQCVSSVVWPQQET--IYSASWDHSVRTWDVEMGK------DLSDIFCGKALNCID 233
L GH + + W + + SAS DH+V WD+ G D IF G + D
Sbjct: 172 LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVED 231
Query: 234 IGGE--GSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291
+ +L + D L IWD R TS P +H + ++ ++ S F L +
Sbjct: 232 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATG 291
Query: 292 SYDGKVMLWDLRTA-WPLSVIDSHKDKVLCADWWRGDSVI--SGGVDSKLCV 340
S D V LWDLR L +SHKD++ W + I S G D +L V
Sbjct: 292 SADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNV 343
Score = 126 (49.4 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 52/199 (26%), Positives = 82/199 (41%)
Query: 115 LRGHKASVHSIA--AETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEP 172
LRGH+ + ++ + SG+++ S S D T+ LW N G V K
Sbjct: 172 LRGHQKEGYGLSWNSNLSGHLL-SASDDHTVCLWDINAGPKEGKIVDAK----------- 219
Query: 173 QLEGEAISTLVGHTQCVSSVVWPQ-QETIY-SASWDHSVRTWDVEMG-----KDLSDIFC 225
AI T GH+ V V W E+++ S + D + WD L D
Sbjct: 220 -----AIFT--GHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHT 272
Query: 226 GKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKW--HNK 283
+ +NC+ ++A G +D + +WD R + F SH I W HN+
Sbjct: 273 AE-VNCLSFNPYSEFILATGSADKTVALWDLRN--LKLKLHTFESHKDEIFQVHWSPHNE 329
Query: 284 SWFHLISASYDGKVMLWDL 302
+ L S+ D ++ +WDL
Sbjct: 330 TI--LASSGTDRRLNVWDL 346
>UNIPROTKB|Q16576 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IDA] [GO:0030308 "negative regulation of cell growth"
evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070370 "cellular
heat acclimation" evidence=IDA] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0008283 "cell
proliferation" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0034080 "CENP-A containing nucleosome assembly at centromere"
evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007275
Pathway_Interaction_DB:telomerasepathway Reactome:REACT_115566
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122
GO:GO:0035098 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 PDB:3CFS PDB:3CFV
PDBsum:3CFS PDBsum:3CFV HOGENOM:HOG000160330 OMA:DGFLLHV
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35143
EMBL:X72841 EMBL:AK091911 EMBL:AL929302 IPI:IPI00395865
IPI:IPI00646512 PIR:I39181 RefSeq:NP_001185648.1 RefSeq:NP_002884.1
UniGene:Hs.495755 ProteinModelPortal:Q16576 SMR:Q16576 DIP:DIP-436N
IntAct:Q16576 MINT:MINT-90512 STRING:Q16576 PhosphoSite:Q16576
DMDM:2494891 PaxDb:Q16576 PeptideAtlas:Q16576 PRIDE:Q16576
Ensembl:ENST00000380084 Ensembl:ENST00000380087 GeneID:5931
KEGG:hsa:5931 UCSC:uc004cxt.3 GeneCards:GC0XM016772 HGNC:HGNC:9890
HPA:CAB037084 MIM:300825 neXtProt:NX_Q16576 PharmGKB:PA34254
PhylomeDB:Q16576 ChiTaRS:RBBP7 EvolutionaryTrace:Q16576
GenomeRNAi:5931 NextBio:23110 PMAP-CutDB:Q16576 ArrayExpress:Q16576
Bgee:Q16576 CleanEx:HS_RBBP7 Genevestigator:Q16576
GermOnline:ENSG00000102054 Uniprot:Q16576
Length = 425
Score = 161 (61.7 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 52/172 (30%), Positives = 74/172 (43%)
Query: 182 LVGHTQCVSSVVWPQQET--IYSASWDHSVRTWDVEMGK------DLSDIFCGKALNCID 233
L GH + + W + + SAS DH+V WD+ G D IF G + D
Sbjct: 172 LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVED 231
Query: 234 IGGE--GSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291
+ +L + D L IWD R TS P +H + ++ ++ S F L +
Sbjct: 232 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATG 291
Query: 292 SYDGKVMLWDLRTA-WPLSVIDSHKDKVLCADWWRGDSVI--SGGVDSKLCV 340
S D V LWDLR L +SHKD++ W + I S G D +L V
Sbjct: 292 SADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNV 343
Score = 126 (49.4 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 52/199 (26%), Positives = 82/199 (41%)
Query: 115 LRGHKASVHSIA--AETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEP 172
LRGH+ + ++ + SG+++ S S D T+ LW N G V K
Sbjct: 172 LRGHQKEGYGLSWNSNLSGHLL-SASDDHTVCLWDINAGPKEGKIVDAK----------- 219
Query: 173 QLEGEAISTLVGHTQCVSSVVWPQ-QETIY-SASWDHSVRTWDVEMG-----KDLSDIFC 225
AI T GH+ V V W E+++ S + D + WD L D
Sbjct: 220 -----AIFT--GHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHT 272
Query: 226 GKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKW--HNK 283
+ +NC+ ++A G +D + +WD R + F SH I W HN+
Sbjct: 273 AE-VNCLSFNPYSEFILATGSADKTVALWDLRN--LKLKLHTFESHKDEIFQVHWSPHNE 329
Query: 284 SWFHLISASYDGKVMLWDL 302
+ L S+ D ++ +WDL
Sbjct: 330 TI--LASSGTDRRLNVWDL 346
>UNIPROTKB|F1SQR0 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0070370 "cellular heat acclimation" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 KO:K11659 EMBL:CU463287 RefSeq:XP_003135004.1
ProteinModelPortal:F1SQR0 Ensembl:ENSSSCT00000013288
GeneID:100519001 KEGG:ssc:100519001 Uniprot:F1SQR0
Length = 425
Score = 161 (61.7 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 52/172 (30%), Positives = 74/172 (43%)
Query: 182 LVGHTQCVSSVVWPQQET--IYSASWDHSVRTWDVEMGK------DLSDIFCGKALNCID 233
L GH + + W + + SAS DH+V WD+ G D IF G + D
Sbjct: 172 LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVED 231
Query: 234 IGGE--GSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291
+ +L + D L IWD R TS P +H + ++ ++ S F L +
Sbjct: 232 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATG 291
Query: 292 SYDGKVMLWDLRTA-WPLSVIDSHKDKVLCADWWRGDSVI--SGGVDSKLCV 340
S D V LWDLR L +SHKD++ W + I S G D +L V
Sbjct: 292 SADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNV 343
Score = 126 (49.4 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 52/199 (26%), Positives = 82/199 (41%)
Query: 115 LRGHKASVHSIA--AETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEP 172
LRGH+ + ++ + SG+++ S S D T+ LW N G V K
Sbjct: 172 LRGHQKEGYGLSWNSNLSGHLL-SASDDHTVCLWDINAGPKEGKIVDAK----------- 219
Query: 173 QLEGEAISTLVGHTQCVSSVVWPQ-QETIY-SASWDHSVRTWDVEMG-----KDLSDIFC 225
AI T GH+ V V W E+++ S + D + WD L D
Sbjct: 220 -----AIFT--GHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHT 272
Query: 226 GKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKW--HNK 283
+ +NC+ ++A G +D + +WD R + F SH I W HN+
Sbjct: 273 AE-VNCLSFNPYSEFILATGSADKTVALWDLRN--LKLKLHTFESHKDEIFQVHWSPHNE 329
Query: 284 SWFHLISASYDGKVMLWDL 302
+ L S+ D ++ +WDL
Sbjct: 330 TI--LASSGTDRRLNVWDL 346
>UNIPROTKB|Q4R304 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9541
"Macaca fascicularis" [GO:0016581 "NuRD complex" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular
heat acclimation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOVERGEN:HBG053236
EMBL:AB179464 ProteinModelPortal:Q4R304 SMR:Q4R304 PRIDE:Q4R304
Uniprot:Q4R304
Length = 425
Score = 161 (61.7 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 52/172 (30%), Positives = 74/172 (43%)
Query: 182 LVGHTQCVSSVVWPQQET--IYSASWDHSVRTWDVEMGK------DLSDIFCGKALNCID 233
L GH + + W + + SAS DH+V WD+ G D IF G + D
Sbjct: 172 LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVED 231
Query: 234 IGGE--GSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291
+ +L + D L IWD R TS P +H + ++ ++ S F L +
Sbjct: 232 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATG 291
Query: 292 SYDGKVMLWDLRTA-WPLSVIDSHKDKVLCADWWRGDSVI--SGGVDSKLCV 340
S D V LWDLR L +SHKD++ W + I S G D +L V
Sbjct: 292 SADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNV 343
Score = 126 (49.4 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 52/199 (26%), Positives = 82/199 (41%)
Query: 115 LRGHKASVHSIA--AETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEP 172
LRGH+ + ++ + SG+++ S S D T+ LW N G V K
Sbjct: 172 LRGHQKEGYGLSWNSNLSGHLL-SASDDHTVCLWDINAGPKEGKIVDAK----------- 219
Query: 173 QLEGEAISTLVGHTQCVSSVVWPQ-QETIY-SASWDHSVRTWDVEMG-----KDLSDIFC 225
AI T GH+ V V W E+++ S + D + WD L D
Sbjct: 220 -----AIFT--GHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHT 272
Query: 226 GKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKW--HNK 283
+ +NC+ ++A G +D + +WD R + F SH I W HN+
Sbjct: 273 AE-VNCLSFNPYSEFILATGSADKTVALWDLRN--LKLKLHTFESHKDEIFQVHWSPHNE 329
Query: 284 SWFHLISASYDGKVMLWDL 302
+ L S+ D ++ +WDL
Sbjct: 330 TI--LASSGTDRRLNVWDL 346
>UNIPROTKB|Q6P315 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8364
"Xenopus (Silurana) tropicalis" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
OMA:DGFLLHV HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC064219
RefSeq:NP_989285.1 UniGene:Str.17153 ProteinModelPortal:Q6P315
SMR:Q6P315 STRING:Q6P315 Ensembl:ENSXETT00000002157 GeneID:394900
KEGG:xtr:394900 Xenbase:XB-GENE-487909 InParanoid:Q6P315
Uniprot:Q6P315
Length = 425
Score = 161 (61.7 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 52/172 (30%), Positives = 74/172 (43%)
Query: 182 LVGHTQCVSSVVWPQQET--IYSASWDHSVRTWDVEMGK------DLSDIFCGKALNCID 233
L GH + + W + + SAS DH+V WD+ G D IF G + D
Sbjct: 172 LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAIFTGHSAVVED 231
Query: 234 IGGE--GSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291
+ +L + D L IWD R TS P +H + ++ ++ S F L +
Sbjct: 232 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATG 291
Query: 292 SYDGKVMLWDLRTA-WPLSVIDSHKDKVLCADWWRGDSVI--SGGVDSKLCV 340
S D V LWDLR L +SHKD++ W + I S G D +L V
Sbjct: 292 SADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNV 343
Score = 126 (49.4 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 50/198 (25%), Positives = 86/198 (43%)
Query: 115 LRGHKASVHSIA--AETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEP 172
LRGH+ + ++ + SG+++ S S D T+ LW +S ++G
Sbjct: 172 LRGHQKEGYGLSWNSNLSGHLL-SASDDHTVCLW----------DISAGPKEGK------ 214
Query: 173 QLEGEAISTLVGHTQCVSSVVWPQ-QETIY-SASWDHSVRTWDVEMG---KDLSDIFCGK 227
++ +AI T GH+ V V W E+++ S + D + WD K +
Sbjct: 215 VVDAKAIFT--GHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHT 272
Query: 228 A-LNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKW--HNKS 284
A +NC+ ++A G +D + +WD R + F SH I W HN++
Sbjct: 273 AEVNCLSFNPYSEFILATGSADKTVALWDLRN--LKLKLHSFESHKDEIFQVHWSPHNET 330
Query: 285 WFHLISASYDGKVMLWDL 302
L S+ D ++ +WDL
Sbjct: 331 I--LASSGTDRRLNVWDL 346
>MGI|MGI:1194910 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016581
"NuRD complex" evidence=ISO;IDA] [GO:0030308 "negative regulation
of cell growth" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0070370 "cellular heat
acclimation" evidence=ISO;ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1194910 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0000122
GO:GO:0035098 GeneTree:ENSGT00570000079069 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35142
EMBL:AK076016 EMBL:AK135779 EMBL:AK135956 EMBL:AK136110
EMBL:AK145531 EMBL:AK145651 EMBL:AK146014 EMBL:AK146904
EMBL:AK146967 EMBL:AK147062 EMBL:AK148852 EMBL:AK153913
EMBL:AK160023 EMBL:AL672123 EMBL:BC003785 IPI:IPI00122698
PIR:I49367 RefSeq:NP_033057.3 UniGene:Mm.270186 UniGene:Mm.486181
ProteinModelPortal:Q60973 SMR:Q60973 IntAct:Q60973 STRING:Q60973
PhosphoSite:Q60973 REPRODUCTION-2DPAGE:Q60973 PaxDb:Q60973
PRIDE:Q60973 Ensembl:ENSMUST00000033720 GeneID:245688
KEGG:mmu:245688 InParanoid:A2AFJ0 NextBio:386918 Bgee:Q60973
CleanEx:MM_RBBP7 Genevestigator:Q60973
GermOnline:ENSMUSG00000031353 Uniprot:Q60973
Length = 425
Score = 161 (61.7 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 52/172 (30%), Positives = 74/172 (43%)
Query: 182 LVGHTQCVSSVVWPQQET--IYSASWDHSVRTWDVEMGK------DLSDIFCGKALNCID 233
L GH + + W + + SAS DH+V WD+ G D IF G + D
Sbjct: 172 LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVED 231
Query: 234 IGGE--GSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291
+ +L + D L IWD R TS P +H + ++ ++ S F L +
Sbjct: 232 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATG 291
Query: 292 SYDGKVMLWDLRTA-WPLSVIDSHKDKVLCADWWRGDSVI--SGGVDSKLCV 340
S D V LWDLR L +SHKD++ W + I S G D +L V
Sbjct: 292 SADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNV 343
Score = 126 (49.4 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 52/199 (26%), Positives = 82/199 (41%)
Query: 115 LRGHKASVHSIA--AETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEP 172
LRGH+ + ++ + SG+++ S S D T+ LW N G V K
Sbjct: 172 LRGHQKEGYGLSWNSNLSGHLL-SASDDHTVCLWDINAGPKEGKIVDAK----------- 219
Query: 173 QLEGEAISTLVGHTQCVSSVVWPQ-QETIY-SASWDHSVRTWDVEMG-----KDLSDIFC 225
AI T GH+ V V W E+++ S + D + WD L D
Sbjct: 220 -----AIFT--GHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHT 272
Query: 226 GKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKW--HNK 283
+ +NC+ ++A G +D + +WD R + F SH I W HN+
Sbjct: 273 AE-VNCLSFNPYSEFILATGSADKTVALWDLRN--LKLKLHTFESHKDEIFQVHWSPHNE 329
Query: 284 SWFHLISASYDGKVMLWDL 302
+ L S+ D ++ +WDL
Sbjct: 330 TI--LASSGTDRRLNVWDL 346
>RGD|620125 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISO;ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISO;ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0070370 "cellular heat acclimation" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:620125 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931
KO:K11659 EMBL:AF090306 EMBL:BC062012 IPI:IPI00194285
RefSeq:NP_114004.1 UniGene:Rn.3600 ProteinModelPortal:Q71UF4
SMR:Q71UF4 STRING:Q71UF4 PRIDE:Q71UF4 Ensembl:ENSRNOT00000066676
GeneID:83712 KEGG:rno:83712 UCSC:RGD:620125 InParanoid:Q71UF4
NextBio:616281 ArrayExpress:Q71UF4 Genevestigator:Q71UF4
GermOnline:ENSRNOG00000005157 Uniprot:Q71UF4
Length = 425
Score = 161 (61.7 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 52/172 (30%), Positives = 74/172 (43%)
Query: 182 LVGHTQCVSSVVWPQQET--IYSASWDHSVRTWDVEMGK------DLSDIFCGKALNCID 233
L GH + + W + + SAS DH+V WD+ G D IF G + D
Sbjct: 172 LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVED 231
Query: 234 IGGE--GSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291
+ +L + D L IWD R TS P +H + ++ ++ S F L +
Sbjct: 232 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATG 291
Query: 292 SYDGKVMLWDLRTA-WPLSVIDSHKDKVLCADWWRGDSVI--SGGVDSKLCV 340
S D V LWDLR L +SHKD++ W + I S G D +L V
Sbjct: 292 SADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNV 343
Score = 126 (49.4 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 52/199 (26%), Positives = 82/199 (41%)
Query: 115 LRGHKASVHSIA--AETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEP 172
LRGH+ + ++ + SG+++ S S D T+ LW N G V K
Sbjct: 172 LRGHQKEGYGLSWNSNLSGHLL-SASDDHTVCLWDINAGPKEGKIVDAK----------- 219
Query: 173 QLEGEAISTLVGHTQCVSSVVWPQ-QETIY-SASWDHSVRTWDVEMG-----KDLSDIFC 225
AI T GH+ V V W E+++ S + D + WD L D
Sbjct: 220 -----AIFT--GHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHT 272
Query: 226 GKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKW--HNK 283
+ +NC+ ++A G +D + +WD R + F SH I W HN+
Sbjct: 273 AE-VNCLSFNPYSEFILATGSADKTVALWDLRN--LKLKLHTFESHKDEIFQVHWSPHNE 329
Query: 284 SWFHLISASYDGKVMLWDL 302
+ L S+ D ++ +WDL
Sbjct: 330 TI--LASSGTDRRLNVWDL 346
>UNIPROTKB|Q8AVH1 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8355
"Xenopus laevis" [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC042283
RefSeq:NP_001080364.1 UniGene:Xl.55215 ProteinModelPortal:Q8AVH1
SMR:Q8AVH1 PRIDE:Q8AVH1 GeneID:380056 KEGG:xla:380056
Xenbase:XB-GENE-487913 Uniprot:Q8AVH1
Length = 425
Score = 161 (61.7 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 54/185 (29%), Positives = 78/185 (42%)
Query: 171 EPQLEGEAISTLV--GHTQCVSSVVWPQQET--IYSASWDHSVRTWDVEMGK------DL 220
+P GE L GH + + W + + SAS DH+V WD+ G D
Sbjct: 159 KPDPSGECSPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDA 218
Query: 221 SDIFCGKALNCIDIGGE--GSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISAC 278
+F G + D+ +L + D L IWD R TS P +H + ++
Sbjct: 219 KAVFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCL 278
Query: 279 KWHNKSWFHLISASYDGKVMLWDLRTA-WPLSVIDSHKDKVLCADWWRGDSVI--SGGVD 335
++ S F L + S D V LWDLR L +SHKD++ W + I S G D
Sbjct: 279 SFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTD 338
Query: 336 SKLCV 340
+L V
Sbjct: 339 RRLNV 343
Score = 125 (49.1 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 49/198 (24%), Positives = 86/198 (43%)
Query: 115 LRGHKASVHSIA--AETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEP 172
LRGH+ + ++ + SG+++ S S D T+ LW +S ++G
Sbjct: 172 LRGHQKEGYGLSWNSNLSGHLL-SASDDHTVCLW----------DISAGPKEGK------ 214
Query: 173 QLEGEAISTLVGHTQCVSSVVWPQ-QETIY-SASWDHSVRTWDVEMG---KDLSDIFCGK 227
++ +A+ T GH+ V V W E+++ S + D + WD K +
Sbjct: 215 VVDAKAVFT--GHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHT 272
Query: 228 A-LNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKW--HNKS 284
A +NC+ ++A G +D + +WD R + F SH I W HN++
Sbjct: 273 AEVNCLSFNPYSEFILATGSADKTVALWDLRN--LKLKLHSFESHKDEIFQVHWSPHNET 330
Query: 285 WFHLISASYDGKVMLWDL 302
L S+ D ++ +WDL
Sbjct: 331 I--LASSGTDRRLNVWDL 346
>RGD|620575 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10116 "Rattus norvegicus" [GO:0001666 "response to hypoxia"
evidence=IEP] [GO:0001843 "neural tube closure" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006309 "apoptotic DNA fragmentation" evidence=ISO] [GO:0006917
"induction of apoptosis" evidence=IDA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISO]
[GO:0007420 "brain development" evidence=ISO;IEP] [GO:0007568
"aging" evidence=IEP] [GO:0007584 "response to nutrient"
evidence=IEP] [GO:0008635 "activation of cysteine-type
endopeptidase activity involved in apoptotic process by cytochrome
c" evidence=ISO] [GO:0010659 "cardiac muscle cell apoptotic
process" evidence=IMP] [GO:0010952 "positive regulation of
peptidase activity" evidence=ISO] [GO:0016505 "apoptotic protease
activator activity" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=IEP] [GO:0030900 "forebrain development"
evidence=ISO] [GO:0031072 "heat shock protein binding"
evidence=IPI] [GO:0034349 "glial cell apoptotic process"
evidence=IEP] [GO:0042802 "identical protein binding"
evidence=ISO;IDA] [GO:0043293 "apoptosome" evidence=ISO;IDA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=IDA] [GO:0051402 "neuron apoptotic
process" evidence=ISO] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=IDA] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 RGD:620575 GO:GO:0005524 GO:GO:0007420 GO:GO:0030154
GO:GO:0006952 GO:GO:0006917 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0071560 GO:GO:0007568
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051260
GO:GO:0001666 GO:GO:0007584 GO:GO:0043531 GO:GO:0042802
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0043293
CTD:317 HOVERGEN:HBG018730 KO:K02084 InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:AF320222 IPI:IPI00324110 RefSeq:NP_076469.1
UniGene:Rn.64522 ProteinModelPortal:Q9EPV5 SMR:Q9EPV5
MINT:MINT-3370020 STRING:Q9EPV5 PRIDE:Q9EPV5 GeneID:78963
KEGG:rno:78963 UCSC:RGD:620575 InParanoid:Q9EPV5 NextBio:614396
Genevestigator:Q9EPV5 GermOnline:ENSRNOG00000008022 GO:GO:0010659
GO:GO:0034349 Uniprot:Q9EPV5
Length = 1249
Score = 116 (45.9 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 46/181 (25%), Positives = 75/181 (41%)
Query: 1 EKVLEIEYIKAVAPQKEEEPSLHDDWV-SAVDGSNPGFILTGCYDNLGRVWKAG-GVCTH 58
+K L++ KA +K + H+D V S+ +I T D ++W +G G H
Sbjct: 636 DKTLQV--FKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSVDKKVKIWDSGTGKLVH 693
Query: 59 ILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGH 118
E H V+ + ++ +AT S D L+LW + +E N + GH
Sbjct: 694 TYEEHSEQVNCCHFTNKSN--HLLLATGSNDSFLKLWDLNQKECRN---------TMFGH 742
Query: 119 KASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEA 178
SV ++ S S D T+ LW D +A + SI ++ E+P + E
Sbjct: 743 TNSVTHCRFSPDDELLASCSADGTLKLW---DVRSANEKKSINVKRFFLSSEDPPEDVEV 799
Query: 179 I 179
I
Sbjct: 800 I 800
Score = 101 (40.6 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 38/166 (22%), Positives = 70/166 (42%)
Query: 182 LVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFC--GKALNCIDIGGEGS 239
L H + V + + S S+D +V+ W+V G+ D C G L+C I + +
Sbjct: 1040 LQAHQETVKDFRLLRDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCA-ISSDAT 1098
Query: 240 ALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVML 299
++ +D +IW P +P+ + HNS + C + L + +G++ +
Sbjct: 1099 KF-SSTSADKTAKIWSFELP---SPLHELKGHNSCVR-CSAFSLDGILLATGDDNGEIRI 1153
Query: 300 WDLRTAWPLSVID--SHKDKVLCADWWRGDSVISGGVDSKLCVSSG 343
W++ L + S ++ W D S D K+ VS+G
Sbjct: 1154 WNVSDGQLLHLCAPISIEEGTATHGGWVTDVCFSP--DRKMLVSAG 1197
>FB|FBgn0263979 [details] [associations]
symbol:Caf1 "Chromatin assembly factor 1 subunit"
species:7227 "Drosophila melanogaster" [GO:0016584 "nucleosome
positioning" evidence=IDA] [GO:0042826 "histone deacetylase
binding" evidence=ISS;IDA] [GO:0031497 "chromatin assembly"
evidence=ISS;IDA] [GO:0033186 "CAF-1 complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0042393 "histone
binding" evidence=IDA;NAS;TAS] [GO:0016590 "ACF complex"
evidence=IDA] [GO:0006281 "DNA repair" evidence=TAS] [GO:0006334
"nucleosome assembly" evidence=NAS;IDA] [GO:0016573 "histone
acetylation" evidence=ISS;IDA] [GO:0016589 "NURF complex"
evidence=NAS;TAS;IPI] [GO:0035035 "histone acetyltransferase
binding" evidence=ISS;IPI] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0006335 "DNA replication-dependent nucleosome assembly"
evidence=NAS] [GO:0003682 "chromatin binding" evidence=NAS]
[GO:0006342 "chromatin silencing" evidence=IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0046976
"histone methyltransferase activity (H3-K27 specific)" evidence=IC]
[GO:0046974 "histone methyltransferase activity (H3-K9 specific)"
evidence=IC] [GO:0016571 "histone methylation" evidence=IDA]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA] [GO:0007307 "eggshell
chorion gene amplification" evidence=IC] [GO:0031523 "Myb complex"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0031491
"nucleosome binding" evidence=IDA] [GO:0042054 "histone
methyltransferase activity" evidence=IDA] [GO:0035097 "histone
methyltransferase complex" evidence=IDA] [GO:0007517 "muscle organ
development" evidence=IMP] [GO:0048813 "dendrite morphogenesis"
evidence=IMP] [GO:0048666 "neuron development" evidence=IMP]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
[GO:0070822 "Sin3-type complex" evidence=IDA] [GO:0007379 "segment
specification" evidence=IMP] [GO:0008284 "positive regulation of
cell proliferation" evidence=IMP] [GO:0061085 "regulation of
histone H3-K27 methylation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 GO:GO:0007346
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 GO:GO:0006281 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0000910 GO:GO:0048813
GO:GO:0007517 GO:GO:0035098 GO:GO:0007379 GO:GO:0006342
GO:GO:0051567 GO:GO:0042393 GO:GO:0005700 GO:GO:0042826
GO:GO:0035035 GO:GO:0042766 GO:GO:0016584 GO:GO:0006334
GO:GO:0016589 GO:GO:0033186 EMBL:U62388 EMBL:AM294392 EMBL:AM294393
EMBL:AM294394 EMBL:AM294395 EMBL:AM294396 EMBL:AM294397
EMBL:AM294398 EMBL:AM294399 EMBL:AM294400 EMBL:AM294401
EMBL:AM294402 EMBL:AM294403 EMBL:AY061408 RefSeq:NP_524354.1
UniGene:Dm.1657 PDB:2XYI PDB:2YB8 PDB:2YBA PDB:3C99 PDB:3C9C
PDBsum:2XYI PDBsum:2YB8 PDBsum:2YBA PDBsum:3C99 PDBsum:3C9C
ProteinModelPortal:Q24572 SMR:Q24572 DIP:DIP-23697N IntAct:Q24572
MINT:MINT-252601 STRING:Q24572 PaxDb:Q24572 PRIDE:Q24572
EnsemblMetazoa:FBtr0083052 GeneID:41836 KEGG:dme:Dmel_CG4236
CTD:41836 FlyBase:FBgn0263347 GeneTree:ENSGT00570000079069
InParanoid:Q24572 KO:K10752 OMA:CQPDLRL OrthoDB:EOG4ZCRKP
PhylomeDB:Q24572 EvolutionaryTrace:Q24572 GenomeRNAi:41836
NextBio:825799 Bgee:Q24572 GermOnline:CG4236 GO:GO:0031523
GO:GO:0016581 GO:GO:0070822 GO:GO:0007307 GO:GO:0070734
InterPro:IPR022052 Pfam:PF12265 Uniprot:Q24572
Length = 430
Score = 161 (61.7 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 54/183 (29%), Positives = 76/183 (41%)
Query: 171 EPQLEGEAISTLVGHTQCVSSVVWPQQETIY--SASWDHSVRTWDVEMGK------DLSD 222
EP E + L GH + + W Y SAS DH++ WD+ D +
Sbjct: 166 EPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKN 225
Query: 223 IFCGKALNCIDIGGE--GSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKW 280
IF G D+ +L + D L IWD R TS P +H + ++ +
Sbjct: 226 IFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSF 285
Query: 281 HNKSWFHLISASYDGKVMLWDLRTA-WPLSVIDSHKDKVLCADWWRGDSVI--SGGVDSK 337
+ S F L + S D V LWDLR L +SHKD++ W + I S G D +
Sbjct: 286 NPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRR 345
Query: 338 LCV 340
L V
Sbjct: 346 LHV 348
Score = 125 (49.1 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 64/272 (23%), Positives = 105/272 (38%)
Query: 43 YDN-LGRVWKAGGVCTHI-LEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAE 100
YDN G G VC I +E VN + +AT + + ++ +
Sbjct: 102 YDNEKGEFGGFGSVCGKIEIEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKH 161
Query: 101 ELVNHPK-KIRSFKILRGHKASVHSIAAETSGN-MVCSGSWDCTISLWRTNDSDAAGNQV 158
P + + LRGH+ + ++ + N + S S D TI LW N +
Sbjct: 162 PSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPK----- 216
Query: 159 SIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQ-QETIY-SASWDHSVRTWDVE- 215
E ++ + I T GHT V V W E+++ S + D + WD
Sbjct: 217 -----------EHRVIDAKNIFT--GHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRN 263
Query: 216 --MGKDLSDIFCGKA-LNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHN 272
K + A +NC+ ++A G +D + +WD R + F SH
Sbjct: 264 NNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN--LKLKLHSFESHK 321
Query: 273 SWISACKW--HNKSWFHLISASYDGKVMLWDL 302
I +W HN++ L S+ D ++ +WDL
Sbjct: 322 DEIFQVQWSPHNETI--LASSGTDRRLHVWDL 351
>POMBASE|SPAC6B12.15 [details] [associations]
symbol:cpc2 "RACK1 ortholog Cpc2" species:4896
"Schizosaccharomyces pombe" [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
fusion" evidence=IGI] [GO:0031139 "positive regulation of
conjugation with cellular fusion" evidence=IMP] [GO:0032956
"regulation of actin cytoskeleton organization" evidence=IGI]
[GO:0032995 "regulation of fungal-type cell wall biogenesis"
evidence=IGI] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0035556 "intracellular signal transduction"
evidence=IMP] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:2000766 "negative regulation of cytoplasmic translation"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC6B12.15 GO:GO:0005737 EMBL:CU329670
GO:GO:0034613 GO:GO:0016020 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0032995
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043022 GO:GO:0032956 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM EMBL:L37885 EMBL:AF320333 EMBL:D89247
PIR:T43158 PIR:T43299 RefSeq:NP_593770.1 ProteinModelPortal:Q10281
SMR:Q10281 IntAct:Q10281 MINT:MINT-1203489 STRING:Q10281
PRIDE:Q10281 EnsemblFungi:SPAC6B12.15.1 GeneID:2543298
KEGG:spo:SPAC6B12.15 OrthoDB:EOG437VPP NextBio:20804316
GO:GO:2000766 GO:GO:0031139 Uniprot:Q10281
Length = 314
Score = 158 (60.7 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 71/269 (26%), Positives = 115/269 (42%)
Query: 60 LEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHK 119
LEGH G V+S++ + + + S+D+++ LW ++ VN+ R L GH
Sbjct: 11 LEGHSGWVTSLSTAPENP---DILLSGSRDKSIILWNLVRDD-VNYGVAQRR---LTGHS 63
Query: 120 ASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAA----GNQ---VSIKKRKGNNQVEEP 172
V A + S SWD TI LW + G+ +S+ N QV
Sbjct: 64 HFVSDCALSFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQVVSG 123
Query: 173 QLE---------GEAISTLV--GHTQCVSSVVW---PQQETIYSASWDHSVRTWDVEMGK 218
+ G T+ GH+ VS V + P T SA WD +V+ WD+E
Sbjct: 124 SRDKTIKIWNIIGNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLETFS 183
Query: 219 DLSDIFCGKA--LNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWIS 276
L G ++ + I +GS L A+GG D L +WD + S ++ + + I+
Sbjct: 184 -LRTSHYGHTGYVSAVTISPDGS-LCASGGRDGTLMLWDLNE---STHLYSLEAKAN-IN 237
Query: 277 ACKWH-NKSWFHLISASYDGKVMLWDLRT 304
A + N+ W + A+ + ++DL T
Sbjct: 238 ALVFSPNRYW---LCAATGSSIRIFDLET 263
Score = 145 (56.1 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 47/180 (26%), Positives = 73/180 (40%)
Query: 167 NQVEEPQLEGEAISTLVGHTQCVSSVVWP-QQETIYSASWDHSVRTWDVEMGKDLSDIFC 225
N V + G A L GH+ VS SASWD ++R WD+E G + + F
Sbjct: 44 NLVRDDVNYGVAQRRLTGHSHFVSDCALSFDSHYALSASWDKTIRLWDLEKG-ECTHQFV 102
Query: 226 GKALNCIDIG-GEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWH-NK 283
G + + + + + +G D ++IW+ G H+ W+S ++ N
Sbjct: 103 GHTSDVLSVSISPDNRQVVSGSRDKTIKIWNII--GNCKYTITDGGHSDWVSCVRFSPNP 160
Query: 284 SWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGGVDSKLCVSSG 343
+SA +D V +WDL T S+ SH S ++ D LC S G
Sbjct: 161 DNLTFVSAGWDKAVKVWDLET---FSLRTSHYGHTGYV------SAVTISPDGSLCASGG 211
Score = 102 (41.0 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 38/132 (28%), Positives = 55/132 (41%)
Query: 23 HDDWVSAVDGS--NPGFILTGCYDNLGRVWKAG------GVCTHILEGHCGAVSSVNIIK 74
H WV+++ + NP +L+G D +W GV L GH VS +
Sbjct: 14 HSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFVSDCAL-- 71
Query: 75 SDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMV 134
S Y +AS D+T+RLW + E + GH + V S++ V
Sbjct: 72 SFDSHYAL--SASWDKTIRLWDLEKGECTHQ---------FVGHTSDVLSVSISPDNRQV 120
Query: 135 CSGSWDCTISLW 146
SGS D TI +W
Sbjct: 121 VSGSRDKTIKIW 132
Score = 96 (38.9 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 31/117 (26%), Positives = 53/117 (45%)
Query: 38 ILTGCYDNLGRVWKAGGVCTHILE--GHCGAVSSVNIIKS-DGLKYVTVATASKDQTLRL 94
+++G D ++W G C + + GH VS V + D L +V+ A D+ +++
Sbjct: 120 VVSGSRDKTIKIWNIIGNCKYTITDGGHSDWVSCVRFSPNPDNLTFVS---AGWDKAVKV 176
Query: 95 WKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDS 151
W D E +R+ GH V ++ G++ SG D T+ LW N+S
Sbjct: 177 W--DLETF-----SLRTSHY--GHTGYVSAVTISPDGSLCASGGRDGTLMLWDLNES 224
Score = 69 (29.3 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 15/63 (23%), Positives = 31/63 (49%)
Query: 153 AAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRT 211
A G+ + I + +V+E ++ + +C+S + W P +T++S D+ +R
Sbjct: 251 ATGSSIRIFDLETQEKVDELTVDFVGVGKKSSEPECIS-LTWSPDGQTLFSGWTDNLIRV 309
Query: 212 WDV 214
W V
Sbjct: 310 WQV 312
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 162 (62.1 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 90/343 (26%), Positives = 144/343 (41%)
Query: 23 HDDWVSAVDGSNPGFIL-TGCYDNLGRVWK--AGGVCTHILEGHCGAVSSV---NIIKSD 76
H WV ++ S G L +GC ++ +W G +L GH ++ + + +
Sbjct: 168 HRHWVLSIAWSPDGKKLASGCKNSQIFLWDPATGNQIGRVLTGHSKWITCLCWEPLHINP 227
Query: 77 GLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCS 136
+Y+ A+ASKD ++R+W + L+ R KIL GH SV + G ++ S
Sbjct: 228 ECRYL--ASASKDGSIRIW----DTLMG-----RCDKILTGHTQSVTCVKWGGDG-LLYS 275
Query: 137 GSWDCTISLWRTNDS----DAAG-----NQVSIKK----RKGNNQVEE----PQLEGEAI 179
S D TI +WR+ D G N +++ R G + E PQ ++
Sbjct: 276 SSQDRTIKVWRSQDGILCRTLQGHAHWVNTMALSTDYVLRTGAFEPAEATINPQDMSGSL 335
Query: 180 STLVGHTQCVSSVVWPQ-QETIYSASWDHSVRTW-DVEMGKDLSDIFCGKALNCIDIGGE 237
+ L Q V Q E + S S D ++ W E K L + +AL +
Sbjct: 336 AELKDKAQQRYDKVRGQGPERLVSGSDDFTLFLWRPAEDKKPLERMTGHQALINQVLFSP 395
Query: 238 GSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKV 297
+ +IA+ D +++W+ R T + H S + W S L+S S D +
Sbjct: 396 DTRIIASASFDKSIKLWEGR---TGKYLTSLRGHVSAVYQIAWSADSRL-LVSGSSDSTL 451
Query: 298 MLWDLRTAWPLSV-IDSHKDKVLCADWWR-GDSVISGGVDSKL 338
+WD T L++ + H D+V DW G V SGG D L
Sbjct: 452 KVWDAETK-KLAIDLPGHADEVFATDWSPDGQRVASGGKDKCL 493
Score = 145 (56.1 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 47/160 (29%), Positives = 71/160 (44%)
Query: 180 STLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKA----LNCIDI 234
S+L GHT+ V SV + P + + S S D +VR WD+ + F K + I
Sbjct: 121 SSLEGHTEAVISVAFSPTGKYLASGSGDTTVRFWDLSTE---TPQFTAKGHRHWVLSIAW 177
Query: 235 GGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKW---H-NKSWFHLIS 290
+G L A+G + + +WDP V + H+ WI+ W H N +L S
Sbjct: 178 SPDGKKL-ASGCKNSQIFLWDPATGNQIGRVL--TGHSKWITCLCWEPLHINPECRYLAS 234
Query: 291 ASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVI 330
AS DG + +WD ++ H V C W GD ++
Sbjct: 235 ASKDGSIRIWDTLMGRCDKILTGHTQSVTCVKWG-GDGLL 273
Score = 119 (46.9 bits), Expect = 0.00034, P = 0.00034
Identities = 50/178 (28%), Positives = 73/178 (41%)
Query: 56 CTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEE----LVNHPKKIRS 111
CT LEGH AV SV G KY+ A+ S D T+R W E H + S
Sbjct: 119 CTSSLEGHTEAVISV-AFSPTG-KYL--ASGSGDTTVRFWDLSTETPQFTAKGHRHWVLS 174
Query: 112 F-------KILRGHKASVHSIAAETSGNM---VCSG--SWDCTISLWRTNDSDAAGNQVS 159
K+ G K S + +GN V +G W T W + ++
Sbjct: 175 IAWSPDGKKLASGCKNSQIFLWDPATGNQIGRVLTGHSKW-ITCLCWEPLHINPECRYLA 233
Query: 160 IKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMG 217
+ G+ ++ + L G L GHTQ V+ V W +YS+S D +++ W + G
Sbjct: 234 SASKDGSIRIWDT-LMGRCDKILTGHTQSVTCVKWGGDGLLYSSSQDRTIKVWRSQDG 290
>UNIPROTKB|Q13610 [details] [associations]
symbol:PWP1 "Periodic tryptophan protein 1 homolog"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=TAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH471054 GO:GO:0006351 CTD:11137 HOGENOM:HOG000212580
HOVERGEN:HBG001543 KO:K14791 OMA:RGVAKET OrthoDB:EOG4STS4J
EMBL:L07758 EMBL:AK290681 IPI:IPI00014298 PIR:I39360
RefSeq:NP_008993.1 UniGene:Hs.506652 ProteinModelPortal:Q13610
SMR:Q13610 IntAct:Q13610 STRING:Q13610 PhosphoSite:Q13610
DMDM:2494897 PaxDb:Q13610 PeptideAtlas:Q13610 PRIDE:Q13610
DNASU:11137 Ensembl:ENST00000412830 GeneID:11137 KEGG:hsa:11137
UCSC:uc001tmo.1 GeneCards:GC12P108079 HGNC:HGNC:17015 HPA:HPA038707
neXtProt:NX_Q13610 PharmGKB:PA142671112 InParanoid:Q13610
PhylomeDB:Q13610 ChiTaRS:PWP1 GenomeRNAi:11137 NextBio:42336
ArrayExpress:Q13610 Bgee:Q13610 CleanEx:HS_PWP1
Genevestigator:Q13610 GermOnline:ENSG00000136045 Uniprot:Q13610
Length = 501
Score = 162 (62.1 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 61/256 (23%), Positives = 119/256 (46%)
Query: 72 IIK-SDGLKYVTVATASKDQ-TLRLWKFDAEE---LVNHPKKIRSFKILRGHKASVHSIA 126
+IK SD L + A +DQ L + ++ EE V+H + ++ L +
Sbjct: 144 LIKPSDNL--IVCGRAEQDQCNLEVHVYNQEEDSFYVHHDILLSAYP-LSVEWLNFDPSP 200
Query: 127 AETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHT 186
+++GN + G+ I +W + D+ ++ G+ ++ + +G+ S+ GHT
Sbjct: 201 DDSTGNYIAVGNMTPVIEVWDLDIVDSLEPVFTL----GSKLSKKKKKKGKKSSSAEGHT 256
Query: 187 QCVSSVVWPQ--QETIYSASWDHSVRTWDVEMGKDLSD--IFCGKALNCIDIGGEGSALI 242
V + W + + + SAS D++V WD+ +GK + + K E LI
Sbjct: 257 DAVLDLSWNKLIRNVLASASADNTVILWDMSLGKPAASLAVHTDKVQTLQFHPFEAQTLI 316
Query: 243 AAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDL 302
+ G D + ++D R P S +++FS I W++ S H ++++ DG V D
Sbjct: 317 S-GSYDKSVALYDCRSPDESHRMWRFSGQ---IERVTWNHFSPCHFLASTDDGFVYNLDA 372
Query: 303 RTAWPLSVIDSHKDKV 318
R+ P+ +++H D++
Sbjct: 373 RSDKPIFTLNAHNDEI 388
>UNIPROTKB|F1NIY8 [details] [associations]
symbol:F1NIY8 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00550000075093 OMA:AAKDCTI EMBL:AADN02052957
EMBL:AADN02052958 IPI:IPI00601574 ProteinModelPortal:F1NIY8
Ensembl:ENSGALT00000002170 Uniprot:F1NIY8
Length = 364
Score = 155 (59.6 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 53/173 (30%), Positives = 79/173 (45%)
Query: 177 EAISTLVGHTQCVSS-VVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALN----- 230
+AI L GH V+ VV P + I+SA+ D SV W+VE GK L + GK
Sbjct: 80 DAIRVLRGHQHSVTCLVVSPDDKFIFSAAKDGSVIKWEVESGKKLCVVPGGKKSTEGQPM 139
Query: 231 -------CIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNK 283
CI I +G L A G + ++ IW+ T ++ F+ H +S + K
Sbjct: 140 GHTAHVLCIAISSDGKYL-ATGDRNKLILIWEA---ATCKRLYTFTGHRDAVSGLSFR-K 194
Query: 284 SWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWW-RGDSVISGGVD 335
+ L SAS+D V +W++ + + H+D + D R V SGG D
Sbjct: 195 GTYQLYSASHDRSVKVWNVEENAYVETLFGHQDVITGMDSLSRECCVTSGGRD 247
Score = 132 (51.5 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 40/137 (29%), Positives = 64/137 (46%)
Query: 181 TLVGHTQCVSSVVWPQQE-TIYSASWDHSVRTWDVEMGKDLSDIFCGK-ALNCIDIGGEG 238
T GH VS + + + +YSAS D SV+ W+VE + +F + + +D
Sbjct: 179 TFTGHRDAVSGLSFRKGTYQLYSASHDRSVKVWNVEENAYVETLFGHQDVITGMDSLSR- 237
Query: 239 SALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVM 298
+ +GG D +R W + P S +F H I + N+ H++S + DG V
Sbjct: 238 ECCVTSGGRDGTVRFW--KIPEESQLIFY--GHQGSIDCIQLINEE--HMVSGADDGSVA 291
Query: 299 LWDLRTAWPLSVI-DSH 314
LW L PL+++ SH
Sbjct: 292 LWGLAKKKPLALVRQSH 308
Score = 43 (20.2 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 83 VATASKDQTLRLWKFDAEELVNHPKKIRS 111
VA +++ LRL K EEL H ++ R+
Sbjct: 8 VAETPQEKKLRLAKLYLEELRRHAEEERA 36
>DICTYBASE|DDB_G0286457 [details] [associations]
symbol:strap "putative serine-threonine kinase
receptor-associated protein" species:44689 "Dictyostelium
discoideum" [GO:0005575 "cellular_component" evidence=ND]
[GO:0030512 "negative regulation of transforming growth factor beta
receptor signaling pathway" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0286457
GenomeReviews:CM000153_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AAFI02000085 GO:GO:0030512
InterPro:IPR013979 Pfam:PF08662 KO:K13137 OMA:LWQTTVG
RefSeq:XP_637742.1 ProteinModelPortal:Q54LT8
EnsemblProtists:DDB0233062 GeneID:8625608 KEGG:ddi:DDB_G0286457
InParanoid:Q54LT8 ProtClustDB:CLSZ2430103 Uniprot:Q54LT8
Length = 293
Score = 157 (60.3 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 49/181 (27%), Positives = 82/181 (45%)
Query: 133 MVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCV-SS 191
++CSG L +N++ + G+ + G+ + + G+ I T GH V SS
Sbjct: 5 LICSGHSRPVSDLSFSNEN-SDGSFIVSACLDGSPMLRNGE-NGDWIGTFEGHKGAVWSS 62
Query: 192 VVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPIL 251
+AS D++V+ WD G ++ I + D S ++ GGS+ IL
Sbjct: 63 RFNSTASQALTASADYTVKLWDTLNGSEILSIEHQSIVKTADFSNNNSRVVT-GGSEKIL 121
Query: 252 RIWDPRKPGTSAPVFQFSSHNSWISACKW--HNKSWFHLISASYDGKVMLWDLRTAWPLS 309
RI+D +P P+ Q S H + I W HN ++S D + +WDLR+ +S
Sbjct: 122 RIFDLERPND--PLLQISGHTNTIKTATWSVHNDDI--VLSGGLDEVIRIWDLRSGTQVS 177
Query: 310 V 310
+
Sbjct: 178 L 178
>MGI|MGI:1338871 [details] [associations]
symbol:Btrc "beta-transducin repeat containing protein"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008013 "beta-catenin binding"
evidence=IDA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0031648
"protein destabilization" evidence=ISO] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IMP]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IDA] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IMP] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IMP] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IDA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
UniPathway:UPA00143 MGI:MGI:1338871 GO:GO:0005829 GO:GO:0005634
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH466534 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511
GO:GO:0019005 GO:GO:0004842 GO:GO:0045862 GO:GO:0008013
GO:GO:0000209 GO:GO:0071407 GO:GO:0045309 Reactome:REACT_109335
Reactome:REACT_24972 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OMA:NAYLKPM
OrthoDB:EOG4F1X2M EMBL:AF099932 EMBL:AF110396 EMBL:AF112979
EMBL:AF081887 EMBL:AF391190 EMBL:AF391178 EMBL:AF391179
EMBL:AF391180 EMBL:AF391181 EMBL:AF391182 EMBL:AF391183
EMBL:AF391184 EMBL:AF391185 EMBL:AF391186 EMBL:AF391187
EMBL:AF391188 EMBL:AF391189 EMBL:AK145624 EMBL:AK156660
EMBL:AK220183 EMBL:BC003989 IPI:IPI00402788 IPI:IPI00877195
RefSeq:NP_001032847.2 RefSeq:NP_033901.1 UniGene:Mm.119717
UniGene:Mm.446448 HSSP:Q9Y297 ProteinModelPortal:Q3ULA2 SMR:Q3ULA2
IntAct:Q3ULA2 STRING:Q3ULA2 PhosphoSite:Q3ULA2
Ensembl:ENSMUST00000065601 Ensembl:ENSMUST00000111936 GeneID:12234
KEGG:mmu:12234 UCSC:uc008hqy.2 UCSC:uc008hqz.2
GeneTree:ENSGT00690000101849 InParanoid:Q571K6 NextBio:280656
Bgee:Q3ULA2 Genevestigator:Q3ULA2 Uniprot:Q3ULA2
Length = 605
Score = 163 (62.4 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 67/282 (23%), Positives = 123/282 (43%)
Query: 38 ILTGCYDNLGRVW-KAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWK 96
I++G DN ++W K+ C IL GH G SV ++ D + T S D T+R+W
Sbjct: 316 IVSGLRDNTIKIWDKSTLECKRILTGHTG---SVLCLQYDER---VIITGSSDSTVRVWD 369
Query: 97 FDAEELVN----HPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSD 152
+A E++N H + + + G + + +M + D T+
Sbjct: 370 VNAGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDM--ASPTDITLRRVLVGHR- 426
Query: 153 AAGNQVS-----IKKRKGNNQVEEPQLEG-EAISTLVGHTQCVSSVVWPQQETIYSASWD 206
AA N V I G+ ++ E + TL GH + ++ + + + + S S D
Sbjct: 427 AAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY-RDRLVVSGSSD 485
Query: 207 HSVRTWDVEMGKDLSDIFCGKAL-NCIDIGGEGSALIAAGGSDPILRIWD------PRKP 259
+++R WD+E G L + + L CI + I +G D +++WD PR P
Sbjct: 486 NTIRLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLMAALDPRAP 542
Query: 260 GTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWD 301
+ + H+ + ++ F ++S+S+D +++WD
Sbjct: 543 AGTLCLRTLVEHSGRVFRLQFDE---FQIVSSSHDDTILIWD 581
Score = 153 (58.9 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 65/278 (23%), Positives = 120/278 (43%)
Query: 50 WKAGGVCTHILEG-HCGAVSSVNI--IKSDGLKYVTVATASKDQTLRLWKFDAEELVNHP 106
W+ G H L+ HC + +S + ++ D K V+ +D T+++W D L
Sbjct: 286 WRCG---RHSLQRIHCRSETSKGVYCLQYDDQKIVS---GLRDNTIKIW--DKSTL---- 333
Query: 107 KKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQV----SIKK 162
+IL GH SV + + ++ +GS D T+ +W N + + ++
Sbjct: 334 ---ECKRILTGHTGSV--LCLQYDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLH 388
Query: 163 RKGNNQVEEPQLEGEAIST--------------LVGHTQCVSSVVWPQQETIYSASWDHS 208
+ NN + + +I+ LVGH V+ V + + I SAS D +
Sbjct: 389 LRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF-DDKYIVSASGDRT 447
Query: 209 VRTWDVEMGKDLSDIFCGK-ALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQ 267
++ W+ + + + K + C+ L+ +G SD +R+WD + G V +
Sbjct: 448 IKVWNTSTCEFVRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDI-ECGACLRVLE 503
Query: 268 FSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTA 305
H + ++ NK ++S +YDGK+ +WDL A
Sbjct: 504 --GHEELVRCIRFDNK---RIVSGAYDGKIKVWDLMAA 536
Score = 139 (54.0 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 40/169 (23%), Positives = 81/169 (47%)
Query: 176 GEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLS--DIFCGK--ALNC 231
GE ++TL+ H + V + + + + S D S+ WD+ D++ + G A+N
Sbjct: 373 GEMLNTLIHHCEAVLHLRF-NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNV 431
Query: 232 IDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291
+D + +++A G D +++W+ T V + H I+ ++ ++ ++S
Sbjct: 432 VDF--DDKYIVSASG-DRTIKVWNT---STCEFVRTLNGHKRGIACLQYRDRL---VVSG 482
Query: 292 SYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGGVDSKLCV 340
S D + LWD+ L V++ H++ V C + ++SG D K+ V
Sbjct: 483 SSDNTIRLWDIECGACLRVLEGHEELVRCIRF-DNKRIVSGAYDGKIKV 530
>UNIPROTKB|F1LMH8 [details] [associations]
symbol:Btrc "Protein Btrc" species:10116 "Rattus
norvegicus" [GO:0000209 "protein polyubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 GeneTree:ENSGT00690000101849 IPI:IPI00372531
PRIDE:F1LMH8 Ensembl:ENSRNOT00000022426 ArrayExpress:F1LMH8
Uniprot:F1LMH8
Length = 605
Score = 163 (62.4 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 67/282 (23%), Positives = 123/282 (43%)
Query: 38 ILTGCYDNLGRVW-KAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWK 96
I++G DN ++W K+ C IL GH G SV ++ D + T S D T+R+W
Sbjct: 316 IVSGLRDNTIKIWDKSTLECKRILTGHTG---SVLCLQYDER---VIITGSSDSTVRVWD 369
Query: 97 FDAEELVN----HPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSD 152
+A E++N H + + + G + + +M + D T+
Sbjct: 370 VNAGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDM--ASPTDITLRRVLVGHR- 426
Query: 153 AAGNQVS-----IKKRKGNNQVEEPQLEG-EAISTLVGHTQCVSSVVWPQQETIYSASWD 206
AA N V I G+ ++ E + TL GH + ++ + + + + S S D
Sbjct: 427 AAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY-RDRLVVSGSSD 485
Query: 207 HSVRTWDVEMGKDLSDIFCGKAL-NCIDIGGEGSALIAAGGSDPILRIWD------PRKP 259
+++R WD+E G L + + L CI + I +G D +++WD PR P
Sbjct: 486 NTIRLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLMAALDPRAP 542
Query: 260 GTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWD 301
+ + H+ + ++ F ++S+S+D +++WD
Sbjct: 543 AGTLCLRTLVEHSGRVFRLQFDE---FQIVSSSHDDTILIWD 581
Score = 153 (58.9 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 65/278 (23%), Positives = 120/278 (43%)
Query: 50 WKAGGVCTHILEG-HCGAVSSVNI--IKSDGLKYVTVATASKDQTLRLWKFDAEELVNHP 106
W+ G H L+ HC + +S + ++ D K V+ +D T+++W D L
Sbjct: 286 WRCG---RHSLQRIHCRSETSKGVYCLQYDDQKIVS---GLRDNTIKIW--DKSTL---- 333
Query: 107 KKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQV----SIKK 162
+IL GH SV + + ++ +GS D T+ +W N + + ++
Sbjct: 334 ---ECKRILTGHTGSV--LCLQYDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLH 388
Query: 163 RKGNNQVEEPQLEGEAIST--------------LVGHTQCVSSVVWPQQETIYSASWDHS 208
+ NN + + +I+ LVGH V+ V + + I SAS D +
Sbjct: 389 LRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF-DDKYIVSASGDRT 447
Query: 209 VRTWDVEMGKDLSDIFCGK-ALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQ 267
++ W+ + + + K + C+ L+ +G SD +R+WD + G V +
Sbjct: 448 IKVWNTSTCEFVRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDI-ECGACLRVLE 503
Query: 268 FSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTA 305
H + ++ NK ++S +YDGK+ +WDL A
Sbjct: 504 --GHEELVRCIRFDNK---RIVSGAYDGKIKVWDLMAA 536
Score = 139 (54.0 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 40/169 (23%), Positives = 81/169 (47%)
Query: 176 GEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLS--DIFCGK--ALNC 231
GE ++TL+ H + V + + + + S D S+ WD+ D++ + G A+N
Sbjct: 373 GEMLNTLIHHCEAVLHLRF-NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNV 431
Query: 232 IDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291
+D + +++A G D +++W+ T V + H I+ ++ ++ ++S
Sbjct: 432 VDF--DDKYIVSASG-DRTIKVWNT---STCEFVRTLNGHKRGIACLQYRDRL---VVSG 482
Query: 292 SYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGGVDSKLCV 340
S D + LWD+ L V++ H++ V C + ++SG D K+ V
Sbjct: 483 SSDNTIRLWDIECGACLRVLEGHEELVRCIRF-DNKRIVSGAYDGKIKV 530
>FB|FBgn0022288 [details] [associations]
symbol:l(2)09851 "lethal (2) 09851" species:7227 "Drosophila
melanogaster" [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE013599 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 GeneTree:ENSGT00550000075124
KO:K14848 OMA:NRLMMLR EMBL:AY071477 EMBL:AY128462
RefSeq:NP_610182.3 UniGene:Dm.1493 UniGene:Dm.36762 SMR:Q8SYL1
IntAct:Q8SYL1 STRING:Q8SYL1 EnsemblMetazoa:FBtr0086043 GeneID:46662
KEGG:dme:Dmel_CG12792 UCSC:CG12792-RA FlyBase:FBgn0022288
InParanoid:Q8SYL1 OrthoDB:EOG441NSN GenomeRNAi:46662 NextBio:838859
Uniprot:Q8SYL1
Length = 456
Score = 161 (61.7 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 73/316 (23%), Positives = 134/316 (42%)
Query: 44 DNLGRVWKAGGVCTHILEGHCGAVSSVN---IIKSDGLKYVTVATASKDQTLRLWKFDAE 100
D LG ++ + +I+ G + + VN ++K L +D+ L + D +
Sbjct: 83 DELGSGRQSFPMTAYIVAGTQASRAHVNNLIVMKMSNLHKTQDNDGDEDEEL---EDDQD 139
Query: 101 ELVNHP--KKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQV 158
++ + KK + L H+ V+ + A GN V + SW L R N D
Sbjct: 140 DVTDREELKKPQMTCALVKHQGCVNRVRARRLGNSVYAASWS---ELGRVNIWDLTQPLQ 196
Query: 159 SIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWD--HSVRTWD-V 214
+++ + Q E Q E + T GH Q ++ W P + + A+ D + W V
Sbjct: 197 AVENAQLAKQYE--QSEARPVFTFGGHQQEGFAIDWSPSADGVL-ATGDCRRDIHVWTPV 253
Query: 215 EMGKDLSDI--FCGKALNCIDIGGEGS--ALIAAGGSDPILRIWDPR-KPGTSAPVFQFS 269
E G D G + + D+ + +++A+ D +RIWD R P + +
Sbjct: 254 EDGTWKVDQRPLAGHSQSVEDLQWSPNERSVLASCSVDKTIRIWDCRASPQKACMLTCED 313
Query: 270 SHNSWISACKWHNKSWFHLISASYDGKVMLWDLR---TAWPLSVIDSHKDKVLCADWWRG 326
+H S ++ W+ F + S DG + +WDLR + P++ H D + +W
Sbjct: 314 AHQSDVNVISWNRNEPF-IASGGDDGYLHIWDLRQFQSKKPIATFKHHTDHITTVEWSPA 372
Query: 327 DSVI--SGGVDSKLCV 340
++ + SGG D ++ +
Sbjct: 373 EATVLASGGDDDQIAL 388
Score = 149 (57.5 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 39/128 (30%), Positives = 57/128 (44%)
Query: 182 LVGHTQCVSSVVW-PQQETIY-SASWDHSVRTWDVEMGKDLSDIF-CGKA----LNCIDI 234
L GH+Q V + W P + ++ S S D ++R WD + + C A +N I
Sbjct: 265 LAGHSQSVEDLQWSPNERSVLASCSVDKTIRIWDCRASPQKACMLTCEDAHQSDVNVIS- 323
Query: 235 GGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYD 294
IA+GG D L IWD R+ + P+ F H I+ +W L S D
Sbjct: 324 WNRNEPFIASGGDDGYLHIWDLRQFQSKKPIATFKHHTDHITTVEWSPAEATVLASGGDD 383
Query: 295 GKVMLWDL 302
++ LWDL
Sbjct: 384 DQIALWDL 391
>UNIPROTKB|E2RM67 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070370 "cellular heat acclimation"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 OMA:DGFLLHV CTD:5931 KO:K11659 EMBL:AAEX03026166
GeneID:480854 KEGG:cfa:480854 NextBio:20855780 RefSeq:XP_849201.1
ProteinModelPortal:E2RM67 Ensembl:ENSCAFT00000020227 Uniprot:E2RM67
Length = 469
Score = 161 (61.7 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 52/172 (30%), Positives = 74/172 (43%)
Query: 182 LVGHTQCVSSVVWPQQET--IYSASWDHSVRTWDVEMGK------DLSDIFCGKALNCID 233
L GH + + W + + SAS DH+V WD+ G D IF G + D
Sbjct: 216 LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVED 275
Query: 234 IGGE--GSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291
+ +L + D L IWD R TS P +H + ++ ++ S F L +
Sbjct: 276 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATG 335
Query: 292 SYDGKVMLWDLRTA-WPLSVIDSHKDKVLCADWWRGDSVI--SGGVDSKLCV 340
S D V LWDLR L +SHKD++ W + I S G D +L V
Sbjct: 336 SADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNV 387
Score = 126 (49.4 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 52/199 (26%), Positives = 82/199 (41%)
Query: 115 LRGHKASVHSIA--AETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEP 172
LRGH+ + ++ + SG+++ S S D T+ LW N G V K
Sbjct: 216 LRGHQKEGYGLSWNSNLSGHLL-SASDDHTVCLWDINAGPKEGKIVDAK----------- 263
Query: 173 QLEGEAISTLVGHTQCVSSVVWPQ-QETIY-SASWDHSVRTWDVEMG-----KDLSDIFC 225
AI T GH+ V V W E+++ S + D + WD L D
Sbjct: 264 -----AIFT--GHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHT 316
Query: 226 GKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKW--HNK 283
+ +NC+ ++A G +D + +WD R + F SH I W HN+
Sbjct: 317 AE-VNCLSFNPYSEFILATGSADKTVALWDLRN--LKLKLHTFESHKDEIFQVHWSPHNE 373
Query: 284 SWFHLISASYDGKVMLWDL 302
+ L S+ D ++ +WDL
Sbjct: 374 TI--LASSGTDRRLNVWDL 390
>UNIPROTKB|I3LV46 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OMA:DGFLLHV KO:K11659 EMBL:CU463287
GeneID:100519001 KEGG:ssc:100519001 RefSeq:XP_003360284.1
Ensembl:ENSSSCT00000024779 Uniprot:I3LV46
Length = 469
Score = 161 (61.7 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 52/172 (30%), Positives = 74/172 (43%)
Query: 182 LVGHTQCVSSVVWPQQET--IYSASWDHSVRTWDVEMGK------DLSDIFCGKALNCID 233
L GH + + W + + SAS DH+V WD+ G D IF G + D
Sbjct: 216 LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVED 275
Query: 234 IGGE--GSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291
+ +L + D L IWD R TS P +H + ++ ++ S F L +
Sbjct: 276 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATG 335
Query: 292 SYDGKVMLWDLRTA-WPLSVIDSHKDKVLCADWWRGDSVI--SGGVDSKLCV 340
S D V LWDLR L +SHKD++ W + I S G D +L V
Sbjct: 336 SADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNV 387
Score = 126 (49.4 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 52/199 (26%), Positives = 82/199 (41%)
Query: 115 LRGHKASVHSIA--AETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEP 172
LRGH+ + ++ + SG+++ S S D T+ LW N G V K
Sbjct: 216 LRGHQKEGYGLSWNSNLSGHLL-SASDDHTVCLWDINAGPKEGKIVDAK----------- 263
Query: 173 QLEGEAISTLVGHTQCVSSVVWPQ-QETIY-SASWDHSVRTWDVEMG-----KDLSDIFC 225
AI T GH+ V V W E+++ S + D + WD L D
Sbjct: 264 -----AIFT--GHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHT 316
Query: 226 GKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKW--HNK 283
+ +NC+ ++A G +D + +WD R + F SH I W HN+
Sbjct: 317 AE-VNCLSFNPYSEFILATGSADKTVALWDLRN--LKLKLHTFESHKDEIFQVHWSPHNE 373
Query: 284 SWFHLISASYDGKVMLWDL 302
+ L S+ D ++ +WDL
Sbjct: 374 TI--LASSGTDRRLNVWDL 390
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 161 (61.7 bits), Expect = 6.6e-09, P = 6.6e-09
Identities = 86/342 (25%), Positives = 142/342 (41%)
Query: 23 HDDWVSAVDGSNPGFIL-TGCYDNLGRVW--KAGGVCTHILEGHCGAVSSVN---IIKSD 76
H WV ++ S G L +GC + +W G L GH ++ ++ + +
Sbjct: 157 HRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGTQVGRTLTGHSKWITGLSWEPLHMNP 216
Query: 77 GLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCS 136
+YV A++SKD ++R+W A R +IL GH SV + G ++ S
Sbjct: 217 ECRYV--ASSSKDGSVRVWDTTAG---------RCERILTGHTQSVTCLRWGGDG-LLYS 264
Query: 137 GSWDCTISLWRTNDS------DAAGNQVSIKK-------RKGNNQVEEPQLEGEAIS-TL 182
S D TI +WR +D G+ V+ R G + E + + + +L
Sbjct: 265 ASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEATVNAQDLQGSL 324
Query: 183 VGHTQCVSS---VVWPQ-QETIYSASWDHSVRTWD-VEMGKDLSDIFCGKALNCIDIGGE 237
+ SS +V Q E + S S D ++ W E K L+ + +AL +
Sbjct: 325 KELKERASSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSP 384
Query: 238 GSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKV 297
S ++A+ D +++WD R T + H + + W S L+S S D +
Sbjct: 385 DSRIVASASFDKSIKLWDGR---TGKYLASLRGHVAAVYQIAWSADSRL-LVSGSSDSTL 440
Query: 298 MLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKL 338
+WD++ + + H D+V DW G V SGG D L
Sbjct: 441 KVWDVKAQKLTTDLPGHADEVYAVDWSPDGQRVASGGKDKCL 482
Score = 145 (56.1 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 46/159 (28%), Positives = 72/159 (45%)
Query: 180 STLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFC-GKALNCIDIGG- 236
S+L GH++ V SV + P + + S S D +VR WD + + C G + I
Sbjct: 110 SSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWD--LSTETPHFTCKGHRHWVLSISWS 167
Query: 237 -EGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKW---H-NKSWFHLISA 291
+G L A+G + + +WDP GT + H+ WI+ W H N ++ S+
Sbjct: 168 PDGKKL-ASGCKNGQILLWDP-STGTQVGR-TLTGHSKWITGLSWEPLHMNPECRYVASS 224
Query: 292 SYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVI 330
S DG V +WD ++ H V C W GD ++
Sbjct: 225 SKDGSVRVWDTTAGRCERILTGHTQSVTCLRWG-GDGLL 262
>UNIPROTKB|Q9I8G9 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0070370
"cellular heat acclimation" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0016581 "NuRD complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:AF279275 IPI:IPI00594478
PIR:JC7558 RefSeq:NP_990001.1 UniGene:Gga.202
ProteinModelPortal:Q9I8G9 SMR:Q9I8G9 STRING:Q9I8G9 PRIDE:Q9I8G9
Ensembl:ENSGALT00000026698 GeneID:395390 KEGG:gga:395390
InParanoid:Q9I8G9 NextBio:20815474 Uniprot:Q9I8G9
Length = 424
Score = 160 (61.4 bits), Expect = 6.6e-09, P = 6.6e-09
Identities = 48/152 (31%), Positives = 67/152 (44%)
Query: 200 IYSASWDHSVRTWDVEMGK------DLSDIFCGKALNCIDIGGE--GSALIAAGGSDPIL 251
+ SAS DH+V WD+ G D IF G + D+ +L + D L
Sbjct: 191 LLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKL 250
Query: 252 RIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTA-WPLSV 310
IWD R TS P +H + ++ ++ S F L + S D V LWDLR L
Sbjct: 251 MIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS 310
Query: 311 IDSHKDKVLCADWWRGDSVI--SGGVDSKLCV 340
+SHKD++ W + I S G D +L V
Sbjct: 311 FESHKDEIFQVHWSPHNETILASSGTDRRLNV 342
Score = 121 (47.7 bits), Expect = 0.00016, P = 0.00016
Identities = 49/198 (24%), Positives = 85/198 (42%)
Query: 115 LRGHKASVHSIA--AETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEP 172
LRGH+ + ++ + G+++ S S D T+ LW +S ++G
Sbjct: 171 LRGHQKEGYGLSWNSNLKGHLL-SASDDHTVCLW----------DISAGPKEGKI----- 214
Query: 173 QLEGEAISTLVGHTQCVSSVVWPQ-QETIY-SASWDHSVRTWDVEMG---KDLSDIFCGK 227
++ +AI T GH+ V V W E+++ S + D + WD K +
Sbjct: 215 -VDAKAIFT--GHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHT 271
Query: 228 A-LNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKW--HNKS 284
A +NC+ ++A G +D + +WD R + F SH I W HN++
Sbjct: 272 AEVNCLSFNPYSEFILATGSADKTVALWDLRN--LKLKLHSFESHKDEIFQVHWSPHNET 329
Query: 285 WFHLISASYDGKVMLWDL 302
L S+ D ++ +WDL
Sbjct: 330 I--LASSGTDRRLNVWDL 345
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 160 (61.4 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 63/258 (24%), Positives = 109/258 (42%)
Query: 102 LVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLW----RTNDSDAAGNQ 157
L N R+++ + GHK V S+ GN++ S S D T+ LW R S+ +
Sbjct: 2 LWNFKPHARAYRYV-GHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHT 60
Query: 158 VSIKKR--KGNNQVEEPQLEGEAIS-----------TLVGHTQCVSSVVW-PQQETIYSA 203
++ + Q E ++I +L HT V + P I S
Sbjct: 61 APVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSC 120
Query: 204 SWDHSVRTWDVEMGKDLSDIFCGKA--LNCIDIGGEGSALIAAGGSDPILRIWDPRKPGT 261
S D +++ WD K + F N +D G+ IA+ GSD +++WD R
Sbjct: 121 SEDKTIKIWDTT-NKQCVNNFSDSVGFANFVDFNPSGTC-IASAGSDQTVKVWDVR---V 175
Query: 262 SAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCA 321
+ + + H+ ++ +H S +LI+AS DG + + DL + + H V
Sbjct: 176 NKLLQHYQVHSGGVNCISFH-PSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTV 234
Query: 322 DWWRGDSVI-SGGVDSKL 338
+ +G + SGG D+++
Sbjct: 235 SFSKGGELFASGGADTQV 252
>UNIPROTKB|F1NYG1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0006470
"protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0042753 OMA:NAYLKPM GeneTree:ENSGT00690000101849
EMBL:AADN02046404 IPI:IPI00684527 Ensembl:ENSGALT00000033197
Uniprot:F1NYG1
Length = 605
Score = 162 (62.1 bits), Expect = 7.4e-09, P = 7.4e-09
Identities = 66/282 (23%), Positives = 122/282 (43%)
Query: 38 ILTGCYDNLGRVWKAGGV-CTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWK 96
I++G DN ++W + C IL GH G SV ++ D + T S D T+R+W
Sbjct: 316 IVSGLRDNTIKIWDKNTLECKRILTGHTG---SVLCLQYDER---VIITGSSDSTVRVWD 369
Query: 97 FDAEELVN----HPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSD 152
+A E++N H + + + G + + +M + D T+
Sbjct: 370 VNAGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDM--ASPTDITLRRVLVGHR- 426
Query: 153 AAGNQVS-----IKKRKGNNQVEEPQLEG-EAISTLVGHTQCVSSVVWPQQETIYSASWD 206
AA N V I G+ ++ E + TL GH + ++ + + + + S S D
Sbjct: 427 AAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY-RDRLVVSGSSD 485
Query: 207 HSVRTWDVEMGKDLSDIFCGKAL-NCIDIGGEGSALIAAGGSDPILRIWD------PRKP 259
+++R WD+E G L + + L CI + I +G D +++WD PR P
Sbjct: 486 NTIRLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLVAALDPRAP 542
Query: 260 GTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWD 301
+ + H+ + ++ F ++S+S+D +++WD
Sbjct: 543 AGTLCLRTLVEHSGRVFRLQFDE---FQIVSSSHDDTILIWD 581
Score = 151 (58.2 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 65/278 (23%), Positives = 120/278 (43%)
Query: 50 WKAGGVCTHILEG-HCGAVSSVNI--IKSDGLKYVTVATASKDQTLRLWKFDAEELVNHP 106
W+ G H L+ HC + +S + ++ D K V+ +D T+++W D L
Sbjct: 286 WRCG---RHSLQRIHCRSETSKGVYCLQYDDQKIVS---GLRDNTIKIW--DKNTL---- 333
Query: 107 KKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQV----SIKK 162
+IL GH SV + + ++ +GS D T+ +W N + + ++
Sbjct: 334 ---ECKRILTGHTGSV--LCLQYDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLH 388
Query: 163 RKGNNQVEEPQLEGEAIST--------------LVGHTQCVSSVVWPQQETIYSASWDHS 208
+ NN + + +I+ LVGH V+ V + + I SAS D +
Sbjct: 389 LRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF-DDKYIVSASGDRT 447
Query: 209 VRTWDVEMGKDLSDIFCGK-ALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQ 267
++ W+ + + + K + C+ L+ +G SD +R+WD + G V +
Sbjct: 448 IKVWNTSTCEFVRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDI-ECGACLRVLE 503
Query: 268 FSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTA 305
H + ++ NK ++S +YDGK+ +WDL A
Sbjct: 504 --GHEELVRCIRFDNK---RIVSGAYDGKIKVWDLVAA 536
Score = 139 (54.0 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 40/169 (23%), Positives = 81/169 (47%)
Query: 176 GEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLS--DIFCGK--ALNC 231
GE ++TL+ H + V + + + + S D S+ WD+ D++ + G A+N
Sbjct: 373 GEMLNTLIHHCEAVLHLRF-NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNV 431
Query: 232 IDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291
+D + +++A G D +++W+ T V + H I+ ++ ++ ++S
Sbjct: 432 VDF--DDKYIVSASG-DRTIKVWNT---STCEFVRTLNGHKRGIACLQYRDRL---VVSG 482
Query: 292 SYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGGVDSKLCV 340
S D + LWD+ L V++ H++ V C + ++SG D K+ V
Sbjct: 483 SSDNTIRLWDIECGACLRVLEGHEELVRCIRF-DNKRIVSGAYDGKIKV 530
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 137 (53.3 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 46/171 (26%), Positives = 74/171 (43%)
Query: 176 GEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCG--KALNCI 232
G + L GH V S + P I S+S DHS+R WDV K L + G +++ +
Sbjct: 58 GRLLWRLAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLH-VLKGHQRSVETV 116
Query: 233 DIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISAS 292
+ L A+GG D +W+ + + V H I + + S L + S
Sbjct: 117 SFSPDSKQL-ASGGWDKRAIVWEVQ---SGRRVHLLVGHCDSIQSSDFSPTS-DSLATGS 171
Query: 293 YDGKVMLWDLRTAWPLSV---IDSHKDKVLCADWWRGDSVISGGVDSKLCV 340
+D V +WDLR + P+ ++ H + C + + SG D +CV
Sbjct: 172 WDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCYSASGLLASGSWDKTICV 222
Score = 135 (52.6 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 42/161 (26%), Positives = 66/161 (40%)
Query: 176 GEAISTLVGHTQCV-SSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFC--GKALNCI 232
G + LVGH + SS P +++ + SWD +V WD+ + G N
Sbjct: 142 GRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNIS 201
Query: 233 DIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISAS 292
+ S L+A+G D + +W KP T+ Q H W+++ + + L SA
Sbjct: 202 CLCYSASGLLASGSWDKTICVW---KPTTNNLPLQLKGHTIWVNSLAF-SPDELKLASAG 257
Query: 293 YDGKVMLWDLRTAWPLSVIDSHKDKV-LCADWWRGDSVISG 332
Y V +WD T L + D C G ++SG
Sbjct: 258 YSRTVKVWDCLTGKCLETLKGMLDVAHACIFTPDGKLLVSG 298
Score = 134 (52.2 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 38/117 (32%), Positives = 58/117 (49%)
Query: 38 ILTGCYDNLGRVWKA-GGVCTHILEGHCGAVSSVNIIK-SDGLKYVTVATASKDQTLRLW 95
+ +G +D VW+ G H+L GHC ++ S + SD L AT S D T+ +W
Sbjct: 125 LASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSL-----ATGSWDSTVHIW 179
Query: 96 KFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWR--TND 150
A P + S+ L GH ++ + SG ++ SGSWD TI +W+ TN+
Sbjct: 180 DLRAST----P--VVSYHNLEGHTGNISCLCYSASG-LLASGSWDKTICVWKPTTNN 229
Score = 61 (26.5 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 24/84 (28%), Positives = 35/84 (41%)
Query: 63 HCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASV 122
H G V+ + DG T+ TAS D + +W + L+ L GH+ V
Sbjct: 25 HHGEVNC-SAFSPDGR---TLLTASDDGCVYVWGTKSGRLLWR---------LAGHRGPV 71
Query: 123 HSIAAETSGNMVCSGSWDCTISLW 146
S G ++ S S D +I LW
Sbjct: 72 KSCCFSPDGRLIASSSSDHSIRLW 95
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 159 (61.0 bits), Expect = 8.0e-09, P = 8.0e-09
Identities = 67/298 (22%), Positives = 123/298 (41%)
Query: 48 RVWK-AGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHP 106
+VW G L+GH +V ++ S L +A+ S D T++LW F E +
Sbjct: 133 KVWDYETGDFERTLKGHTDSVQDISFDHSGKL----LASCSADMTIKLWDFQGFECI--- 185
Query: 107 KKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGN 166
+ + GH +V S+A +G+ + S + D TI +W + R+
Sbjct: 186 ------RTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCV--KTFTGHREWV 237
Query: 167 NQVEEPQLEGEAISTLVGHTQCVSS-VVWPQQETIYSASWDHSVR--TWDVEMGKDLSDI 223
V P +G I++ + Q V VV ++ +H V +W E S I
Sbjct: 238 RMVR-PNQDGTLIASC-SNDQTVRVWVVATKECKAELREHEHVVECISWAPE--SSYSSI 293
Query: 224 FCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNK 283
G G L++ G D +++WD T + H++W+ +H+
Sbjct: 294 SEATGSETKKSGKPGPFLLS-GSRDKTIKMWDV---STGMCLMTLVGHDNWVRGVLFHSG 349
Query: 284 SWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKLCV 340
F ++S + D + +WD + + +++H+ V D+ + V++G VD + V
Sbjct: 350 GKF-ILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 118 (46.6 bits), Expect = 0.00032, P = 0.00032
Identities = 40/160 (25%), Positives = 75/160 (46%)
Query: 161 KKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKD 219
+KR + P E A+S GH V+ V++ P + SAS D +++ WD E G D
Sbjct: 87 QKRDPKEWIPRPP-EKYALS---GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-D 141
Query: 220 LSDIFCGKALNCIDIGGEGSA-LIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISAC 278
G + DI + S L+A+ +D +++WD + G + H+ +S+
Sbjct: 142 FERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ--GFEC-IRTMHGHDHNVSSV 198
Query: 279 KWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKV 318
H++SA+ D + +W+++T + + H++ V
Sbjct: 199 AIMPNG-DHIVSAARDKTIKMWEVQTGYCVKTFTGHREWV 237
>WB|WBGene00013143 [details] [associations]
symbol:Y53C12B.1 species:6239 "Caenorhabditis elegans"
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0007126 "meiosis"
evidence=IMP] [GO:0045132 "meiotic chromosome segregation"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0009792
GO:GO:0006898 GO:GO:0040010 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045132 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:Z99278 KO:K14555 OMA:HHFRGSP
GeneTree:ENSGT00690000102183 PIR:T27133 RefSeq:NP_496100.1
UniGene:Cel.13957 ProteinModelPortal:O18215 SMR:O18215
STRING:O18215 PaxDb:O18215 EnsemblMetazoa:Y53C12B.1 GeneID:190203
KEGG:cel:CELE_Y53C12B.1 UCSC:Y53C12B.1 CTD:190203
WormBase:Y53C12B.1 HOGENOM:HOG000016188 InParanoid:O18215
NextBio:944956 Uniprot:O18215
Length = 793
Score = 163 (62.4 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 83/354 (23%), Positives = 148/354 (41%)
Query: 3 VLEIEYIKAVAPQKEEEPSLHDDWVSA-VDGSNPGFILTGCYDNLGRVWKAGGVCTHILE 61
+L+ E +K +A Q HD+ S + G + + + R++ + ++
Sbjct: 302 ILDFENLK-IARQIV---GFHDEIYSCCLLGKDESHMAVASNTSEIRLYNTKTLDCQLIR 357
Query: 62 GHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKAS 121
GH +V SV S +A+ SKD ++ W+ + + GH +
Sbjct: 358 GHTESVLSV---VSPTWDTSLLASCSKDNSIIFWRLVTSPENDSCSTLVPVAAATGHANT 414
Query: 122 VHSIAAETSGN--MVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEE-PQLEGEA 178
V ++A +G + S S DCTI LW S +V I K + VE+ P+L
Sbjct: 415 VTALAISNTGRAPFLASVSTDCTIKLWGLGVSTKL-KEVKIDAEK--DFVEQLPKLT--C 469
Query: 179 ISTLVGHTQCVSSVVWPQQET-IYSASWDHSVRTWDVEMGK---DLSDIFCGKALNCIDI 234
ST+V H + V+ V + + I + D V+ W V+ K ++ G D+
Sbjct: 470 SSTMVAHGKDVNCVDISESDALIATGGMDKLVKLWQVDTHKMQLGIAGTLSGHRRGVGDV 529
Query: 235 G-GEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKW-HNKSWFHLISAS 292
+ S +A+ D ++IW+ + + S H+ + + N S LISA
Sbjct: 530 KFAKNSHKLASCSGDMTIKIWNISEKSCLQTI---SGHSCAVFRVIFARNDS--QLISAD 584
Query: 293 YDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDS-VISGGVDSKLCVSSGVS 345
G + +W ++TA ID+H DK+ +S ++ G D ++ V V+
Sbjct: 585 SAGIIKIWTIKTADCECSIDAHTDKIWSLSKNHNESEFVTAGTDGRIVVWKDVT 638
>UNIPROTKB|I3LQS7 [details] [associations]
symbol:RRP9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00550000075093
OMA:AAKDCTI EMBL:FP102591 Ensembl:ENSSSCT00000032341 Uniprot:I3LQS7
Length = 478
Score = 135 (52.6 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 39/132 (29%), Positives = 62/132 (46%)
Query: 181 TLVGHTQCVSSVVWPQ-QETIYSASWDHSVRTWDVEMGKDLSDIFCGK-ALNCIDIGGEG 238
T GH VS + + + +YS S D SV+ W+V + +F + A+ +D
Sbjct: 239 TFTGHRDAVSGLAFRRGTHQLYSTSHDRSVKVWNVAENSYVETLFGHQDAVAALDALSR- 297
Query: 239 SALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVM 298
+ AGG D +R+W + P S VF H I + + N+ H++S + DG V
Sbjct: 298 ECCVTAGGRDGTVRVW--KIPEESQLVFY--GHQGSIDSIQLINEE--HMVSGADDGSVA 351
Query: 299 LWDLRTAWPLSV 310
LW L PL++
Sbjct: 352 LWGLSKKRPLAL 363
Score = 115 (45.5 bits), Expect = 0.00089, P = 0.00089
Identities = 51/210 (24%), Positives = 90/210 (42%)
Query: 150 DSDAAGN-QVSIKKRKGNNQ---VEEPQLEGEA-ISTLVGHTQCVSS-VVWPQQETIYSA 203
+ AG + + +++G Q +E Q A I L GH ++ V+ P I+SA
Sbjct: 108 EDQVAGKLKEDVLEQRGRLQKSVAKEIQAPAPADIRILRGHQLSITCLVITPDDLAIFSA 167
Query: 204 SWDHSVRTWDVEMGKDLSDIFCGKA------------LNCIDIGGEGSALIAAGGSDPIL 251
+ D ++ W VE G+ L I K + C+ I +G L A+G ++
Sbjct: 168 AKDCTIIKWSVESGRKLHVIPRAKKGAEGQPPGHSSHILCMAISSDGKYL-ASGDRSKLI 226
Query: 252 RIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVI 311
IW+ + + ++ F+ H +S + + L S S+D V +W++ + +
Sbjct: 227 LIWEAQ---SCRHLYTFTGHRDAVSGLAFR-RGTHQLYSTSHDRSVKVWNVAENSYVETL 282
Query: 312 DSHKDKVLCADWW-RGDSVISGGVDSKLCV 340
H+D V D R V +GG D + V
Sbjct: 283 FGHQDAVAALDALSRECCVTAGGRDGTVRV 312
Score = 68 (29.0 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 21/59 (35%), Positives = 29/59 (49%)
Query: 89 DQTLRLWKFDAEEL-VNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLW 146
+Q RL K A+E+ P IR ILRGH+ S+ + + S + DCTI W
Sbjct: 121 EQRGRLQKSVAKEIQAPAPADIR---ILRGHQLSITCLVITPDDLAIFSAAKDCTIIKW 176
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 160 (61.4 bits), Expect = 8.6e-09, P = 8.6e-09
Identities = 86/342 (25%), Positives = 142/342 (41%)
Query: 23 HDDWVSAVDGSNPGFIL-TGCYDNLGRVW--KAGGVCTHILEGHCGAVSSVN---IIKSD 76
H WV ++ S G L +GC + +W G L GH ++ ++ + +
Sbjct: 155 HRHWVLSISWSPDGKKLASGCKNGQVLLWDPSTGLQVGRTLTGHSKWITGLSWEPLHMNP 214
Query: 77 GLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCS 136
+YV A++SKD ++R+W A R +IL GH SV + G ++ S
Sbjct: 215 ECRYV--ASSSKDGSVRVWDTTAG---------RCERILTGHTQSVTCLRWGGDG-LLYS 262
Query: 137 GSWDCTISLWRTNDS------DAAGNQVSIKK-------RKGNNQVEEPQLEGEAIS-TL 182
S D TI +WR +D G+ V+ R G + E + + + +L
Sbjct: 263 ASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEATVNAQDLQGSL 322
Query: 183 VGHTQCVSS---VVWPQ-QETIYSASWDHSVRTWD-VEMGKDLSDIFCGKALNCIDIGGE 237
+ SS +V Q E + S S D ++ W E K L+ + +AL +
Sbjct: 323 KELKERASSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSP 382
Query: 238 GSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKV 297
S ++A+ D +++WD R T + H + + W S L+S S D +
Sbjct: 383 DSRIVASASFDKSIKLWDGR---TGKYLASLRGHVAAVYQIAWSADSRL-LVSGSSDSTL 438
Query: 298 MLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKL 338
+WD++ + + H D+V DW G V SGG D L
Sbjct: 439 KVWDVKAQKLATDLPGHADEVYAVDWSPDGQRVASGGKDKCL 480
Score = 141 (54.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 46/160 (28%), Positives = 73/160 (45%)
Query: 180 STLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFC-GKALNCIDIGG- 236
S+L GH++ V SV + P + + S S D +VR WD + + C G + I
Sbjct: 108 SSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWD--LSTETPHFTCKGHRHWVLSISWS 165
Query: 237 -EGSALIAAGGSDPILRIWDPRKPGTSAPVFQ-FSSHNSWISACKW---H-NKSWFHLIS 290
+G L A+G + + +WDP T V + + H+ WI+ W H N ++ S
Sbjct: 166 PDGKKL-ASGCKNGQVLLWDP---STGLQVGRTLTGHSKWITGLSWEPLHMNPECRYVAS 221
Query: 291 ASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVI 330
+S DG V +WD ++ H V C W GD ++
Sbjct: 222 SSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWG-GDGLL 260
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 156 (60.0 bits), Expect = 9.2e-09, P = 9.2e-09
Identities = 52/172 (30%), Positives = 75/172 (43%)
Query: 176 GEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFC-GKALNCID 233
G I TL+GHT V + PQ I S S+D +VR WDV GK L + + +D
Sbjct: 103 GSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVD 162
Query: 234 IGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQF-SSHNSWISACKWHNKSWFHLISAS 292
+GS LI + D + RIWD GT V N +S ++ F L+ +
Sbjct: 163 FNRDGS-LIVSSSYDGLCRIWDS---GTGHCVKTLIDDENPPVSFVRFSPNGKFILVG-T 217
Query: 293 YDGKVMLWDLRTAWPLSVIDSHKDKVLCADW----WRGDSVISGGVDSKLCV 340
D + LW++ +A L H + C G ++SG D+ CV
Sbjct: 218 LDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDN--CV 267
Score = 146 (56.5 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 46/166 (27%), Positives = 75/166 (45%)
Query: 181 TLVGHTQCVSSVVWPQQ-ETIYSASWDHSVRTWDVEMGKD-LSDI---FCGKALNCIDIG 235
TL H + VSSV + + SAS D ++RT+ + D +++ F G D+
Sbjct: 19 TLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVA 78
Query: 236 GEGSA-LIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYD 294
A I + D L++WD T + + H ++ + C N ++S S+D
Sbjct: 79 FSSDARFIVSASDDKTLKLWDVE---TGSLIKTLIGHTNY-AFCVNFNPQSNMIVSGSFD 134
Query: 295 GKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKLC 339
V +WD+ T L V+ +H D V D+ R G ++S D LC
Sbjct: 135 ETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDG-LC 179
Score = 126 (49.4 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 41/133 (30%), Positives = 63/133 (47%)
Query: 23 HDDWVSAVDGSNPG-FILTGCYDNLGRVWKAG-GVCTH-ILEGHCGAVSSVNIIKSDGLK 79
H D V+AVD + G I++ YD L R+W +G G C +++ VS V S K
Sbjct: 154 HSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRF--SPNGK 211
Query: 80 YVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAE---TSGNMVCS 136
++ V T D TLRLW + + + K GH + + I++ T+G + S
Sbjct: 212 FILVGTL--DNTLRLWNISSAKFL---------KTYTGHVNAQYCISSAFSVTNGKRIVS 260
Query: 137 GSWDCTISLWRTN 149
GS D + +W N
Sbjct: 261 GSEDNCVHMWELN 273
Score = 95 (38.5 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 37/131 (28%), Positives = 57/131 (43%)
Query: 23 HDDWVSAVDGSNPGFILTGCY-DNLGRVWKAGGVCTHILE------GHCGAVSSVNIIKS 75
H+ VS+V S+ G +L D R + + I E GH +S V S
Sbjct: 23 HNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDV-AFSS 81
Query: 76 DGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVC 135
D +++ +AS D+TL+LW + L+ K L GH + NM+
Sbjct: 82 DA-RFIV--SASDDKTLKLWDVETGSLI---------KTLIGHTNYAFCVNFNPQSNMIV 129
Query: 136 SGSWDCTISLW 146
SGS+D T+ +W
Sbjct: 130 SGSFDETVRIW 140
Score = 85 (35.0 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 37/167 (22%), Positives = 77/167 (46%)
Query: 176 GEAISTLVGHTQCVSSVVWPQQET-IYSASWDHSVRTWDVEMGKDLSDIFCGK--ALNCI 232
G+ + L H+ V++V + + + I S+S+D R WD G + + + ++ +
Sbjct: 145 GKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFV 204
Query: 233 DIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQ-FSSH-NS-WISACKWHNKSWFHLI 289
G I G D LR+W+ +SA + ++ H N+ + + + + ++
Sbjct: 205 RFSPNGK-FILVGTLDNTLRLWNI----SSAKFLKTYTGHVNAQYCISSAFSVTNGKRIV 259
Query: 290 SASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVI-SGGVD 335
S S D V +W+L + L ++ H + V+ +++I SG +D
Sbjct: 260 SGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLD 306
Score = 72 (30.4 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 24/85 (28%), Positives = 38/85 (44%)
Query: 179 ISTLVGHTQ---CVSSVVWPQQ-ETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDI 234
+ T GH C+SS + I S S D+ V W++ K L + G +++
Sbjct: 233 LKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLE-GHTETVMNV 291
Query: 235 GGEGSA-LIAAGGSDPILRIWDPRK 258
+ LIA+G D +RIW +K
Sbjct: 292 ACHPTENLIASGSLDKTVRIWTQKK 316
Score = 37 (18.1 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 6/16 (37%), Positives = 12/16 (75%)
Query: 331 SGGVDSKLCVSSGVSI 346
+G V+++ C+SS S+
Sbjct: 237 TGHVNAQYCISSAFSV 252
>CGD|CAL0000124 [details] [associations]
symbol:ASC1 species:5476 "Candida albicans" [GO:0005092
"GDP-dissociation inhibitor activity" evidence=IGI;ISA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IGI;ISA]
[GO:0007155 "cell adhesion" evidence=IMP] [GO:0001403 "invasive
growth in response to glucose limitation" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=IEA] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0036244 "cellular response to neutral pH"
evidence=IMP] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0036178 "filamentous growth of a population of unicellular
organisms in response to neutral pH" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0010255 "glucose mediated
signaling pathway" evidence=IEA] [GO:0032995 "regulation of
fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] [GO:0017148 "negative regulation of
translation" evidence=IEA] [GO:0034613 "cellular protein
localization" evidence=IEA] [GO:0043022 "ribosome binding"
evidence=IEA] [GO:0005080 "protein kinase C binding" evidence=IEA]
[GO:0001965 "G-protein alpha-subunit binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0000124 GO:GO:0005737 GO:GO:0071216 GO:GO:0036244
GO:GO:0036180 GO:GO:0036178 GO:GO:0009405 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007155 GO:GO:0007186
GO:GO:0009267 EMBL:AP006852 GO:GO:0001403 GO:GO:0036170
EMBL:AACQ01000156 RefSeq:XP_712478.1 RefSeq:XP_888749.1
ProteinModelPortal:P83774 STRING:Q59S46 COMPLUYEAST-2DPAGE:P83774
GeneID:3645907 GeneID:3704151 KEGG:cal:CaO19.6906
KEGG:cal:CaO19_6906 GO:GO:0005092 Uniprot:P83774
Length = 317
Score = 156 (60.0 bits), Expect = 9.2e-09, P = 9.2e-09
Identities = 70/246 (28%), Positives = 108/246 (43%)
Query: 60 LEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNH--PKKIRSFK---- 113
LEGH G V+S+ + + + S+D+TL WK E + PKK SFK
Sbjct: 13 LEGHNGWVTSLATTPAHP---DLLLSGSRDKTLIKWKLTGGEDNQYGIPKK--SFKGHSH 67
Query: 114 ILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQ 173
I++ S A ++ WD G+ +S+ K Q+
Sbjct: 68 IVQDVTISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNLRQIVSAS 127
Query: 174 LE---------GEAISTLVGHTQCVSSV-VWP--QQETIYSASWDHSVRTWDVEMGKDLS 221
+ GE ++TL GH VS+V + P Q T+ SASWD +V++WD+ +
Sbjct: 128 RDKTVKVWNTIGECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADYSVNA 187
Query: 222 DIFCGKA--LNCIDIGGEGSALIAAGGSDPILRIWDPRKPGT------SAPV--FQFSSH 271
D F G ++CI + +GS L A+ G D ++ +WD K T A V FS +
Sbjct: 188 D-FIGHTGYISCITLSPDGS-LCASAGKDGVIILWDLNKNKTLYTLEAKAEVHALAFSPN 245
Query: 272 NSWISA 277
W++A
Sbjct: 246 RYWLAA 251
Score = 116 (45.9 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 59/226 (26%), Positives = 90/226 (39%)
Query: 23 HDDWVS--AVDGSNPGFILTGCYDNLGRVWK-AGG------VCTHILEGHCGAVSSVNII 73
H+ WV+ A ++P +L+G D WK GG + +GH V V I
Sbjct: 16 HNGWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHSHIVQDVTI- 74
Query: 74 KSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNM 133
+DG Y +AS D+TLRLW + E GHK V S++ +
Sbjct: 75 SADGA-YAL--SASWDRTLRLWDLETGETTQR---------FVGHKGDVLSVSIAKNLRQ 122
Query: 134 VCSGSWDCTISLWRT-----------NDSDAA-----GNQVS-IKKRKGNNQVEEPQLEG 176
+ S S D T+ +W T ND +A +Q S + + V+ L
Sbjct: 123 IVSASRDKTVKVWNTIGECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLAD 182
Query: 177 EAIST-LVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDL 220
+++ +GHT +S + P SA D + WD+ K L
Sbjct: 183 YSVNADFIGHTGYISCITLSPDGSLCASAGKDGVIILWDLNKNKTL 228
Score = 40 (19.1 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 237 EGSALIAAGGSDPILRIWDPRKP 259
+G L A G +D ++R+W P
Sbjct: 294 DGQNLFA-GYTDNVIRVWQVMTP 315
>UNIPROTKB|P83774 [details] [associations]
symbol:ASC1 "Guanine nucleotide-binding protein subunit
beta-like protein" species:237561 "Candida albicans SC5314"
[GO:0001403 "invasive growth in response to glucose limitation"
evidence=IMP] [GO:0005092 "GDP-dissociation inhibitor activity"
evidence=ISA] [GO:0007155 "cell adhesion" evidence=IMP] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISA]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009405 "pathogenesis" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0036170 "filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:0036178 "filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:0036180 "filamentous growth of a population of unicellular
organisms in response to biotic stimulus" evidence=IMP] [GO:0036244
"cellular response to neutral pH" evidence=IMP] [GO:0071216
"cellular response to biotic stimulus" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0000124 GO:GO:0005737 GO:GO:0071216 GO:GO:0036244
GO:GO:0036180 GO:GO:0036178 GO:GO:0009405 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007155 GO:GO:0007186
GO:GO:0009267 EMBL:AP006852 GO:GO:0001403 GO:GO:0036170
EMBL:AACQ01000156 RefSeq:XP_712478.1 RefSeq:XP_888749.1
ProteinModelPortal:P83774 STRING:Q59S46 COMPLUYEAST-2DPAGE:P83774
GeneID:3645907 GeneID:3704151 KEGG:cal:CaO19.6906
KEGG:cal:CaO19_6906 GO:GO:0005092 Uniprot:P83774
Length = 317
Score = 156 (60.0 bits), Expect = 9.2e-09, P = 9.2e-09
Identities = 70/246 (28%), Positives = 108/246 (43%)
Query: 60 LEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNH--PKKIRSFK---- 113
LEGH G V+S+ + + + S+D+TL WK E + PKK SFK
Sbjct: 13 LEGHNGWVTSLATTPAHP---DLLLSGSRDKTLIKWKLTGGEDNQYGIPKK--SFKGHSH 67
Query: 114 ILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQ 173
I++ S A ++ WD G+ +S+ K Q+
Sbjct: 68 IVQDVTISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNLRQIVSAS 127
Query: 174 LE---------GEAISTLVGHTQCVSSV-VWP--QQETIYSASWDHSVRTWDVEMGKDLS 221
+ GE ++TL GH VS+V + P Q T+ SASWD +V++WD+ +
Sbjct: 128 RDKTVKVWNTIGECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADYSVNA 187
Query: 222 DIFCGKA--LNCIDIGGEGSALIAAGGSDPILRIWDPRKPGT------SAPV--FQFSSH 271
D F G ++CI + +GS L A+ G D ++ +WD K T A V FS +
Sbjct: 188 D-FIGHTGYISCITLSPDGS-LCASAGKDGVIILWDLNKNKTLYTLEAKAEVHALAFSPN 245
Query: 272 NSWISA 277
W++A
Sbjct: 246 RYWLAA 251
Score = 116 (45.9 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 59/226 (26%), Positives = 90/226 (39%)
Query: 23 HDDWVS--AVDGSNPGFILTGCYDNLGRVWK-AGG------VCTHILEGHCGAVSSVNII 73
H+ WV+ A ++P +L+G D WK GG + +GH V V I
Sbjct: 16 HNGWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHSHIVQDVTI- 74
Query: 74 KSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNM 133
+DG Y +AS D+TLRLW + E GHK V S++ +
Sbjct: 75 SADGA-YAL--SASWDRTLRLWDLETGETTQR---------FVGHKGDVLSVSIAKNLRQ 122
Query: 134 VCSGSWDCTISLWRT-----------NDSDAA-----GNQVS-IKKRKGNNQVEEPQLEG 176
+ S S D T+ +W T ND +A +Q S + + V+ L
Sbjct: 123 IVSASRDKTVKVWNTIGECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLAD 182
Query: 177 EAIST-LVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDL 220
+++ +GHT +S + P SA D + WD+ K L
Sbjct: 183 YSVNADFIGHTGYISCITLSPDGSLCASAGKDGVIILWDLNKNKTL 228
Score = 40 (19.1 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 237 EGSALIAAGGSDPILRIWDPRKP 259
+G L A G +D ++R+W P
Sbjct: 294 DGQNLFA-GYTDNVIRVWQVMTP 315
>MGI|MGI:1918604 [details] [associations]
symbol:Wdr31 "WD repeat domain 31" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1918604 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AL732594 EMBL:AF274321
EMBL:AK017259 EMBL:AK141026 EMBL:BC037102 IPI:IPI00119217
IPI:IPI00417055 RefSeq:NP_076086.1 UniGene:Mm.155573
ProteinModelPortal:Q9JHB4 SMR:Q9JHB4 STRING:Q9JHB4 PRIDE:Q9JHB4
Ensembl:ENSMUST00000030087 Ensembl:ENSMUST00000107452
Ensembl:ENSMUST00000120095 GeneID:71354 KEGG:mmu:71354
UCSC:uc008tet.1 UCSC:uc008teu.1 CTD:114987
GeneTree:ENSGT00700000104574 HOGENOM:HOG000290168
HOVERGEN:HBG072917 InParanoid:Q9JHB4 OMA:EERIQTK OrthoDB:EOG49GKGV
NextBio:333609 Bgee:Q9JHB4 CleanEx:MM_WDR31 Genevestigator:Q9JHB4
GermOnline:ENSMUSG00000028391 Uniprot:Q9JHB4
Length = 367
Score = 106 (42.4 bits), Expect = 9.5e-09, Sum P(2) = 9.5e-09
Identities = 38/146 (26%), Positives = 65/146 (44%)
Query: 3 VLEIEYIKAVAPQKEEEPSLHDDWVSAVDGSNPGFILTGCYDNLGRV--WKAGGVCTHIL 60
++E E ++ APQ E P +H D VS + N ++G D WK G +
Sbjct: 44 IIE-ERVQTKAPQ-EYIP-VHVDTVSVIATLNSDLCISGGKDKTAVAYNWKTGRMVKRFT 100
Query: 61 EGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKA 120
GH ++ + I + +AS+D+T+ +W +HP++ L GH
Sbjct: 101 -GHEREITKIACIPKANQFF----SASRDKTVLMWDLQGS---SHPRQQ-----LSGHAM 147
Query: 121 SVHSIAAETSGNMVCSGSWDCTISLW 146
V +A + +C+GS D ++ LW
Sbjct: 148 VVTGLAVSPDSSQLCTGSRDNSLLLW 173
Score = 96 (38.9 bits), Expect = 9.5e-09, Sum P(2) = 9.5e-09
Identities = 42/177 (23%), Positives = 74/177 (41%)
Query: 176 GEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKA---LNC 231
G+ + V+ + W P + I S D ++R WD G ++ +F K +C
Sbjct: 178 GQCVERASVSRNLVTHLCWVPSEPYIVQTSEDKTIRLWD-SRGLQMAHMFPTKQHIQTHC 236
Query: 232 IDIGGEGSALIAA----GGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSW-- 285
++ +G I+ GG +WD R+ T + ++ H +++C + KS
Sbjct: 237 -EVSVDGHTCISCSSGFGGEGCEATLWDLRQ--TRDRMCEYKGHFQTVASCVFLPKSTAL 293
Query: 286 FHLISAS-YDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGGVDSKLCVS 341
+I+ S +D KV +W+ T LS + L S+ G + S LC S
Sbjct: 294 MPMIATSAHDSKVKIWNQDTGACLSTLSLDGSGPLT-------SLAVGDISSLLCAS 343
Score = 63 (27.2 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 21/77 (27%), Positives = 31/77 (40%)
Query: 83 VATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCT 142
+AT + D + K D + + K R K GH+ + IA N S S D T
Sbjct: 68 IATLNSDLCISGGK-DKTAVAYNWKTGRMVKRFTGHEREITKIACIPKANQFFSASRDKT 126
Query: 143 ISLWRTNDSDAAGNQVS 159
+ +W S Q+S
Sbjct: 127 VLMWDLQGSSHPRQQLS 143
>UNIPROTKB|O14727 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9606 "Homo sapiens" [GO:0006952 "defense response"
evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0051402 "neuron apoptotic process" evidence=IEA]
[GO:0001843 "neural tube closure" evidence=IEA] [GO:0006309
"apoptotic DNA fragmentation" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000166 "nucleotide binding" evidence=TAS]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=NAS] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=IDA;TAS] [GO:0042981
"regulation of apoptotic process" evidence=TAS] [GO:0043293
"apoptosome" evidence=IDA;TAS] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IDA] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006915
"apoptotic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] Reactome:REACT_578 InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 Pathway_Interaction_DB:p75ntrpathway GO:GO:0007399
GO:GO:0006952 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0000166 DrugBank:DB00171 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900 GO:GO:0051402
Pathway_Interaction_DB:caspase_pathway EMBL:CH471054 GO:GO:0043531
GO:GO:0001843 GO:GO:0097193 GO:GO:0006309 GO:GO:0008656
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OrthoDB:EOG43TZTP GO:GO:0043293 EMBL:AF013263 EMBL:AJ243003
EMBL:AJ243004 EMBL:AJ243005 EMBL:AJ243006 EMBL:AJ243007
EMBL:AJ243008 EMBL:AJ243009 EMBL:AJ243010 EMBL:AJ243011
EMBL:AJ243048 EMBL:AJ243107 EMBL:AF134397 EMBL:AF149794
EMBL:AB007873 EMBL:AB103079 EMBL:BC136531 EMBL:BC136532
EMBL:AJ133643 EMBL:AJ133644 EMBL:AJ133645 EMBL:AF248734
IPI:IPI00023630 IPI:IPI00217460 IPI:IPI00217461 IPI:IPI00217462
IPI:IPI00217463 IPI:IPI00375875 PIR:T03818 RefSeq:NP_001151.1
RefSeq:NP_037361.1 RefSeq:NP_863651.1 RefSeq:NP_863658.1
RefSeq:NP_863659.1 UniGene:Hs.552567 PDB:1C15 PDB:1CWW PDB:1CY5
PDB:1Z6T PDB:2P1H PDB:2YGS PDB:3IZA PDB:3YGS PDBsum:1C15
PDBsum:1CWW PDBsum:1CY5 PDBsum:1Z6T PDBsum:2P1H PDBsum:2YGS
PDBsum:3IZA PDBsum:3YGS ProteinModelPortal:O14727 SMR:O14727
DIP:DIP-27624N IntAct:O14727 MINT:MINT-96751 STRING:O14727
PhosphoSite:O14727 PaxDb:O14727 PRIDE:O14727
Ensembl:ENST00000333991 Ensembl:ENST00000357310
Ensembl:ENST00000359972 Ensembl:ENST00000547045
Ensembl:ENST00000550527 Ensembl:ENST00000551964
Ensembl:ENST00000552268 GeneID:317 KEGG:hsa:317 UCSC:uc001tfy.3
UCSC:uc001tfz.3 UCSC:uc001tga.3 UCSC:uc001tgb.3 UCSC:uc001tgc.3
CTD:317 GeneCards:GC12P099039 HGNC:HGNC:576 HPA:HPA031373
MIM:602233 neXtProt:NX_O14727 PharmGKB:PA24868 HOVERGEN:HBG018730
InParanoid:O14727 KO:K02084 OMA:KVCKNSA PhylomeDB:O14727
Pathway_Interaction_DB:hivnefpathway BindingDB:O14727
ChEMBL:CHEMBL1795093 EvolutionaryTrace:O14727 GenomeRNAi:317
NextBio:1287 PMAP-CutDB:O14727 ArrayExpress:O14727 Bgee:O14727
Genevestigator:O14727 GermOnline:ENSG00000120868 InterPro:IPR017251
PIRSF:PIRSF037646 Uniprot:O14727
Length = 1248
Score = 122 (48.0 bits), Expect = 9.5e-09, Sum P(2) = 9.5e-09
Identities = 47/181 (25%), Positives = 79/181 (43%)
Query: 1 EKVLEIEYIKAVAPQKEEEPSLHDDWV-SAVDGSNPGFILTGCYDNLGRVWKA-GGVCTH 58
+K L++ KA +K E H+D V ++ FI T D ++W + G H
Sbjct: 636 DKTLQV--FKAETGEKLLEIKAHEDEVLCCAFSTDDRFIATCSVDKKVKIWNSMTGELVH 693
Query: 59 ILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGH 118
+ H V+ + S ++ +AT S D L+LW + +E N + GH
Sbjct: 694 TYDEHSEQVNCCHFTNSS--HHLLLATGSSDCFLKLWDLNQKECRN---------TMFGH 742
Query: 119 KASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEA 178
SV+ ++ S S D T+ LW D+ +A + SI ++ +E+PQ + E
Sbjct: 743 TNSVNHCRFSPDDKLLASCSADGTLKLW---DATSANERKSINVKQFFLNLEDPQEDMEV 799
Query: 179 I 179
I
Sbjct: 800 I 800
Score = 92 (37.4 bits), Expect = 9.5e-09, Sum P(2) = 9.5e-09
Identities = 35/165 (21%), Positives = 67/165 (40%)
Query: 182 LVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFC--GKALNCIDIGGEGS 239
L GH + V + + S S+D +V+ W++ G D C G L+C DI + +
Sbjct: 1040 LRGHQETVKDFRLLKNSRLLSWSFDGTVKVWNIITGNKEKDFVCHQGTVLSC-DISHDAT 1098
Query: 240 ALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVML 299
++ +D +IW P+ + HN + + S L + +G++ +
Sbjct: 1099 KF-SSTSADKTAKIWSF---DLLLPLHELRGHNGCVRCSAFSVDSTL-LATGDDNGEIRI 1153
Query: 300 WDLRTAWPLSVIDSHKDKVLCADW-WRGDSVISGGVDSKLCVSSG 343
W++ L + ++ W D S D K+ +S+G
Sbjct: 1154 WNVSNGELLHLCAPLSEEGAATHGGWVTDLCFSP--DGKMLISAG 1196
Score = 65 (27.9 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 35/174 (20%), Positives = 71/174 (40%)
Query: 166 NNQVEEPQLEGEAI-STLVGHTQCVSSVVWPQQE-TIYSASWDHSVRTWDVEMGKDLSDI 223
N +E +L I + H + V + + E T+ S+S D ++ W+ ++ K +
Sbjct: 982 NGAIEILELVNNRIFQSRFQHKKTVWHIQFTADEKTLISSSDDAEIQVWNWQLDKCI--F 1039
Query: 224 FCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKW-HN 282
G D ++ + + D +++W+ T F H + +C H+
Sbjct: 1040 LRGHQETVKDFRLLKNSRLLSWSFDGTVKVWNII---TGNKEKDFVCHQGTVLSCDISHD 1096
Query: 283 KSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGGVDS 336
+ F SA K+ +DL PL + H V C+ + ++++ G D+
Sbjct: 1097 ATKFSSTSADKTAKIWSFDLLL--PLHELRGHNGCVRCSAFSVDSTLLATGDDN 1148
Score = 46 (21.3 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 9/33 (27%), Positives = 18/33 (54%)
Query: 184 GHTQCVSSVVW-PQQETIYSASWDHSVRTWDVE 215
GH V V++ P + ++S D ++R W+ +
Sbjct: 880 GHLSWVHGVMFSPDGSSFLTSSDDQTIRLWETK 912
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 160 (61.4 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 51/158 (32%), Positives = 76/158 (48%)
Query: 182 LVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGK--ALNCIDIGGEG 238
L GH + VS+V + P I S D +V+ W GK L F G ++ I +G
Sbjct: 172 LRGHLRGVSAVRFSPDASMIASGGADGAVKVWAASTGK-LIYTFEGHLAGISTISWSPDG 230
Query: 239 SALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVM 298
A IA+G D +R+W+ G + P F H++++ A + K L+S SYD V
Sbjct: 231 -ATIASGSDDKTIRLWNVLT-GKAHPT-PFIGHHNYVYAIAFSPKGNM-LVSGSYDEAVF 286
Query: 299 LWDLRTAWPLSVIDSHKDKVLCADW-WRGDSVISGGVD 335
LWD+R+A + + +H D V D W G + S D
Sbjct: 287 LWDVRSARVMKSLPAHSDPVSGIDVVWDGTLIASCATD 324
Score = 141 (54.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 83/331 (25%), Positives = 132/331 (39%)
Query: 27 VSAVDGS-NPGFILTGCYDNLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKYVTVA 84
VSAV S + I +G D +VW A G + EGH +S+++ DG T+A
Sbjct: 179 VSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTFEGHLAGISTISW-SPDG---ATIA 234
Query: 85 TASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTIS 144
+ S D+T+RLW + HP GH V++IA GNM+ SGS+D +
Sbjct: 235 SGSDDKTIRLWNVLTGKA--HPTPFI------GHHNYVYAIAFSPKGNMLVSGSYDEAVF 286
Query: 145 LWRTNDS------DAAGNQVS-IKKRKGNNQVEEPQLEG--EAISTLVGHTQCVSSVVWP 195
LW + A + VS I + +G T G QC+ ++V
Sbjct: 287 LWDVRSARVMKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIWDTSTG--QCLRTLVHE 344
Query: 196 QQETIYSASWDHS---VRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILR 252
+ S + + V W ++ L D G+ L G + + G+
Sbjct: 345 DNPPVSSVKFSPNGKYVLAWTLDDCVRLWDYVEGRCLKTYQ--GHSNKKYSLSGA---FG 399
Query: 253 IWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVID 312
++ PG + P + F+ +S S DG ++ WD+ T L I+
Sbjct: 400 VYGQSIPGRT-PGYAFA-------------------VSGSEDGAILCWDVVTKKVLQRIE 439
Query: 313 SHKDKVLCADWW---RGDSVISGGVDSKLCV 340
+H VL D G ++S G+D + V
Sbjct: 440 AHDGVVLGVDTCSTGEGRFMVSCGLDGTVRV 470
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 158 (60.7 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 67/298 (22%), Positives = 123/298 (41%)
Query: 48 RVWK-AGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHP 106
+VW G L+GH +V ++ + L +A+ S D T++LW F E +
Sbjct: 133 KVWDYETGDFERTLKGHTDSVQDISFDHTGKL----LASCSADMTIKLWDFQGFECI--- 185
Query: 107 KKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGN 166
+ + GH +V S+A +G+ + S S D TI +W + R+
Sbjct: 186 ------RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCV--KTFTGHREWV 237
Query: 167 NQVEEPQLEGEAISTLVGHTQCVSS-VVWPQQETIYSASWDHSVR--TWDVEMGKDLSDI 223
V P +G I++ + Q V VV ++ +H V +W E S I
Sbjct: 238 RMVR-PNQDGTLIASC-SNDQTVRVWVVATKECKAELREHEHVVECISWAPE--SSYSTI 293
Query: 224 FCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNK 283
G G L++ G D +++WD T + H++W+ +H+
Sbjct: 294 SEATGSETKKSGKPGPFLLS-GSRDKTIKMWDI---STGMCLMTLVGHDNWVRGVLFHSG 349
Query: 284 SWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKLCV 340
F ++S + D + +WD + + +++H+ V D+ + V++G VD + V
Sbjct: 350 GKF-ILSCADDKTLRVWDFKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 406
Score = 118 (46.6 bits), Expect = 0.00032, P = 0.00032
Identities = 40/160 (25%), Positives = 75/160 (46%)
Query: 161 KKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKD 219
+KR + P E A+S GH V+ V++ P + SAS D +++ WD E G D
Sbjct: 87 QKRDPKEWIPRPP-EKYALS---GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-D 141
Query: 220 LSDIFCGKALNCIDIGGEGSA-LIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISAC 278
G + DI + + L+A+ +D +++WD + G + H+ +S+
Sbjct: 142 FERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQ--GFEC-IRTMHGHDHNVSSV 198
Query: 279 KWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKV 318
H++SAS D + +W+++T + + H++ V
Sbjct: 199 AIMPNG-DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWV 237
>SGD|S000000402 [details] [associations]
symbol:TAF5 "Subunit (90 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IC]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0032947 "protein complex scaffold" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 SGD:S000000402 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003682
EMBL:BK006936 GO:GO:0000124 GO:GO:0046695 InterPro:IPR013720
Pfam:PF08513 EMBL:Z21487 GO:GO:0032947 GO:GO:0043130 GO:GO:0005669
GO:GO:0051123 GeneTree:ENSGT00700000104377 KO:K03130
HOGENOM:HOG000212424 OrthoDB:EOG4S1XG9 EMBL:Z36067 EMBL:AY692890
PIR:S34023 RefSeq:NP_009757.1 PDB:2J49 PDBsum:2J49
ProteinModelPortal:P38129 SMR:P38129 DIP:DIP-740N IntAct:P38129
MINT:MINT-475651 STRING:P38129 PaxDb:P38129 PeptideAtlas:P38129
EnsemblFungi:YBR198C GeneID:852497 KEGG:sce:YBR198C CYGD:YBR198c
OMA:PNINYLA EvolutionaryTrace:P38129 NextBio:971495
Genevestigator:P38129 GermOnline:YBR198C Uniprot:P38129
Length = 798
Score = 162 (62.1 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 65/218 (29%), Positives = 97/218 (44%)
Query: 60 LEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEE-LV-----NHPKKIRSFK 113
L GH G V S + S KY+ + S+D+T+RLW D LV NHP SF
Sbjct: 521 LVGHSGTVYSTSF--SPDNKYLL--SGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFS 576
Query: 114 ILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAG---NQVSIKKRKGNNQVE 170
L GH + S +T+ C + I ND D N + +
Sbjct: 577 PL-GHYFATAS-HDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCR 634
Query: 171 EPQLE-GEAISTLVGHTQCVSSV-VWPQQETIYSASWDHSVRTWDVEMGKDLSDIFC-GK 227
+ G+++ +GHT V S+ V P + + S D + WD+ GK L + GK
Sbjct: 635 MWDVSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGK 694
Query: 228 -ALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAP 264
A+ + EG+ LI+ GG+D +R+WD +K T+ P
Sbjct: 695 NAIYSLSYSKEGNVLIS-GGADHTVRVWDLKK-ATTEP 730
Score = 116 (45.9 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 46/164 (28%), Positives = 70/164 (42%)
Query: 178 AISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKA--LNCIDI 234
A+ + GH V V + P +AS D + R W + L IF G ++C+
Sbjct: 559 ALVSYKGHNHPVWDVSFSPLGHYFATASHDQTARLWSCDHIYPLR-IFAGHLNDVDCVSF 617
Query: 235 GGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNS-WISACKWHNKSWFHLISASY 293
G + G SD R+WD T V F H + IS + W L + S
Sbjct: 618 HPNG-CYVFTGSSDKTCRMWDV---STGDSVRLFLGHTAPVISIAVCPDGRW--LSTGSE 671
Query: 294 DGKVMLWDLRTAWPLSVIDSH-KDKVLCADWWR-GDSVISGGVD 335
DG + +WD+ T L + H K+ + + + G+ +ISGG D
Sbjct: 672 DGIINVWDIGTGKRLKQMRGHGKNAIYSLSYSKEGNVLISGGAD 715
Score = 72 (30.4 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 20/71 (28%), Positives = 32/71 (45%)
Query: 84 ATASKDQTLRLWKFDAEEL------VNHPKKIR--SFKILRGHKASVHSIAAETSGNMVC 135
A +D +++W D L +N+ K + K L GH +V+S + +
Sbjct: 482 AAGFQDSYIKIWSLDGSSLNNPNIALNNNDKDEDPTCKTLVGHSGTVYSTSFSPDNKYLL 541
Query: 136 SGSWDCTISLW 146
SGS D T+ LW
Sbjct: 542 SGSEDKTVRLW 552
>RGD|1563620 [details] [associations]
symbol:RGD1563620 "similar to retinoblastoma binding protein 4"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1563620 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OrthoDB:EOG4DBTDH IPI:IPI00368073
ProteinModelPortal:D4A250 Ensembl:ENSRNOT00000033132 Uniprot:D4A250
Length = 425
Score = 158 (60.7 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 56/185 (30%), Positives = 79/185 (42%)
Query: 171 EPQLEGEAISTLV--GHTQCVSSVVWPQQETIY--SASWDHSVRTWDVEM----GKDLS- 221
+P GE S L GH + + W + Y SAS DH++ WD+ GK +
Sbjct: 160 KPDPSGECNSDLHLRGHQKEGYGLSWNPYLSGYLLSASDDHTICLWDISAVPKEGKVVGA 219
Query: 222 -DIFCGKALNCIDIGGE--GSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISAC 278
IF G D+ +L + D L IWD R TS P ++ + ++
Sbjct: 220 KTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAYTAEVNCL 279
Query: 279 KWHNKSWFHLISASYDGKVMLWDLRTA-WPLSVIDSHKDKVLCADWWRGDSVI--SGGVD 335
++ S F L S S D V LWDLR L +SHKD++ W + I S G D
Sbjct: 280 SFNPNSEFILASGSPDKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTD 339
Query: 336 SKLCV 340
+L V
Sbjct: 340 RRLNV 344
Score = 118 (46.6 bits), Expect = 0.00034, P = 0.00034
Identities = 50/199 (25%), Positives = 84/199 (42%)
Query: 115 LRGHKASVHSIAAET--SGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEP 172
LRGH+ + ++ SG ++ S S D TI LW +S ++G
Sbjct: 173 LRGHQKEGYGLSWNPYLSGYLL-SASDDHTICLW----------DISAVPKEG------- 214
Query: 173 QLEGEAISTLVGHTQCVSSVVWPQ-QETIY-SASWDHSVRTWDVEMGKDLS-----DIFC 225
++ G A + GHT V V W E+++ S + D + WD D +
Sbjct: 215 KVVG-AKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAYT 273
Query: 226 GKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKW--HNK 283
+ +NC+ ++A+G D + +WD R + F SH I +W HN+
Sbjct: 274 AE-VNCLSFNPNSEFILASGSPDKTVALWDLRN--LKLKLHSFESHKDEIFQVQWSPHNE 330
Query: 284 SWFHLISASYDGKVMLWDL 302
+ L S+ D ++ +WDL
Sbjct: 331 TI--LASSGTDRRLNVWDL 347
>UNIPROTKB|O43818 [details] [associations]
symbol:RRP9 "U3 small nucleolar RNA-interacting protein 2"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0030532 "small
nuclear ribonucleoprotein complex" evidence=TAS] [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=TAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH471055 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003723 GO:GO:0006364 GO:GO:0030532
GO:GO:0005732 HOGENOM:HOG000188732 KO:K14793 EMBL:AJ001340
EMBL:AK313696 EMBL:BC001113 EMBL:BC009879 EMBL:BC010048
EMBL:BC023662 IPI:IPI00217862 RefSeq:NP_004695.1 UniGene:Hs.153768
ProteinModelPortal:O43818 SMR:O43818 IntAct:O43818 STRING:O43818
PhosphoSite:O43818 DOSAC-COBS-2DPAGE:O43818 SWISS-2DPAGE:O43818
PaxDb:O43818 PeptideAtlas:O43818 PRIDE:O43818 DNASU:9136
Ensembl:ENST00000232888 GeneID:9136 KEGG:hsa:9136 UCSC:uc003dbw.1
CTD:9136 GeneCards:GC03M051943 HGNC:HGNC:16829 HPA:HPA038798
neXtProt:NX_O43818 PharmGKB:PA162402176 HOVERGEN:HBG079296
InParanoid:O43818 OMA:AAKDCTI OrthoDB:EOG4XKV6X PhylomeDB:O43818
GenomeRNAi:9136 NextBio:34259 Bgee:O43818 CleanEx:HS_RRP9
Genevestigator:O43818 GermOnline:ENSG00000114767 Uniprot:O43818
Length = 475
Score = 132 (51.5 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 39/132 (29%), Positives = 60/132 (45%)
Query: 181 TLVGHTQCVSSVVWPQ-QETIYSASWDHSVRTWDVEMGKDLSDIFCGK-ALNCIDIGGEG 238
T GH VS + + + +YS S D SV+ W+V + +F + A+ +D
Sbjct: 236 TFTGHRDAVSGLAFRRGTHQLYSTSHDRSVKVWNVAENSYVETLFGHQDAVAALDALSR- 294
Query: 239 SALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVM 298
+ AGG D +R+W + P S VF H I N+ H++S + DG V
Sbjct: 295 ECCVTAGGRDGTVRVW--KIPEESQLVFY--GHQGSIDCIHLINEE--HMVSGADDGSVA 348
Query: 299 LWDLRTAWPLSV 310
LW L PL++
Sbjct: 349 LWGLSKKRPLAL 360
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 53/210 (25%), Positives = 90/210 (42%)
Query: 150 DSDAAGN-QVSIKKRKGNNQ---VEEPQLEGEA-ISTLVGHTQCVSS-VVWPQQETIYSA 203
+ AG + + +++G Q +E Q A I L GH ++ VV P I+SA
Sbjct: 105 EDQVAGRLKEDVLEQRGRLQKLVAKEIQAPASADIRVLRGHQLSITCLVVTPDDSAIFSA 164
Query: 204 SWDHSVRTWDVEMGKDLSDIFCGKA------------LNCIDIGGEGSALIAAGGSDPIL 251
+ D S+ W VE G+ L I K + C+ I +G L A+G ++
Sbjct: 165 AKDCSIIKWSVESGRKLHVIPRAKKGAEGKPPGHSSHVLCMAISSDGKYL-ASGDRSKLI 223
Query: 252 RIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVI 311
IW+ + + ++ F+ H +S + + L S S+D V +W++ + +
Sbjct: 224 LIWEAQ---SCQHLYTFTGHRDAVSGLAFR-RGTHQLYSTSHDRSVKVWNVAENSYVETL 279
Query: 312 DSHKDKVLCADWW-RGDSVISGGVDSKLCV 340
H+D V D R V +GG D + V
Sbjct: 280 FGHQDAVAALDALSRECCVTAGGRDGTVRV 309
Score = 70 (29.7 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 89 DQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLW 146
+Q RL K A+E + P ++LRGH+ S+ + + + S + DC+I W
Sbjct: 118 EQRGRLQKLVAKE-IQAPASA-DIRVLRGHQLSITCLVVTPDDSAIFSAAKDCSIIKW 173
>UNIPROTKB|Q2HJ56 [details] [associations]
symbol:PWP1 "Periodic tryptophan protein 1 homolog"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BC113302 IPI:IPI00691154 RefSeq:NP_001039631.1
UniGene:Bt.12659 ProteinModelPortal:Q2HJ56 STRING:Q2HJ56
PRIDE:Q2HJ56 Ensembl:ENSBTAT00000006109 GeneID:514147
KEGG:bta:514147 CTD:11137 GeneTree:ENSGT00390000017324
HOGENOM:HOG000212580 HOVERGEN:HBG001543 InParanoid:Q2HJ56 KO:K14791
OMA:RGVAKET OrthoDB:EOG4STS4J NextBio:20871193 Uniprot:Q2HJ56
Length = 500
Score = 159 (61.0 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 61/256 (23%), Positives = 119/256 (46%)
Query: 72 IIK-SDGLKYVTVATASKDQ-TLRLWKFDAEE---LVNHPKKIRSFKILRGHKASVHSIA 126
+IK SD L + A +DQ L + ++ EE V+H + ++ L +
Sbjct: 143 LIKPSDNL--IVCGRAEQDQCNLEVHVYNQEEDSFYVHHDILLSAYP-LSVEWLNFDPSP 199
Query: 127 AETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHT 186
+++GN + G+ I +W + D+ ++ G+ ++ + +G+ S+ GHT
Sbjct: 200 DDSTGNYIAVGNMTPVIEVWDLDIVDSLEPVFTL----GSKLSKKKKKKGKKNSSADGHT 255
Query: 187 QCVSSVVWPQ--QETIYSASWDHSVRTWDVEMGKDLSD--IFCGKALNCIDIGGEGSALI 242
V + W + + + SAS D++V WD+ +GK + + K E LI
Sbjct: 256 DAVLDLSWNKLVRNVLASASADNTVILWDMSLGKPAASLAVHTDKVQTLQFHPFEAQTLI 315
Query: 243 AAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDL 302
+ G D + ++D R P S +++FS I W++ S H ++++ DG V D
Sbjct: 316 S-GSYDKSVALYDCRSPEESHRMWRFSGQ---IERVTWNHFSPCHFLASTDDGFVYNLDA 371
Query: 303 RTAWPLSVIDSHKDKV 318
R+ P+ +++H D++
Sbjct: 372 RSDKPIFTLNAHNDEI 387
>UNIPROTKB|F1S8U2 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:CU469143 EMBL:CT737224
EMBL:CT737143 Ensembl:ENSSSCT00000011555 Uniprot:F1S8U2
Length = 506
Score = 159 (61.0 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 66/282 (23%), Positives = 122/282 (43%)
Query: 38 ILTGCYDNLGRVW-KAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWK 96
I++G DN ++W K+ C IL GH G SV ++ D + T S D T+R+W
Sbjct: 217 IVSGLRDNTIKIWDKSTLECKRILTGHTG---SVLCLQYDER---VIITGSSDSTVRVWD 270
Query: 97 FDAEELVN----HPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSD 152
+ E++N H + + + G + + +M + D T+
Sbjct: 271 VNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDM--ASPTDITLRRVLVGHR- 327
Query: 153 AAGNQVS-----IKKRKGNNQVEEPQLEG-EAISTLVGHTQCVSSVVWPQQETIYSASWD 206
AA N V I G+ ++ E + TL GH + ++ + + + + S S D
Sbjct: 328 AAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY-RDRLVVSGSSD 386
Query: 207 HSVRTWDVEMGKDLSDIFCGKAL-NCIDIGGEGSALIAAGGSDPILRIWD------PRKP 259
+++R WD+E G L + + L CI + I +G D +++WD PR P
Sbjct: 387 NTIRLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLIAALDPRAP 443
Query: 260 GTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWD 301
+ + H+ + ++ F ++S+S+D +++WD
Sbjct: 444 AGTLCLRTLVEHSGRVFRLQFDE---FQIVSSSHDDTILIWD 482
Score = 152 (58.6 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 65/278 (23%), Positives = 120/278 (43%)
Query: 50 WKAGGVCTHILEG-HCGAVSSVNI--IKSDGLKYVTVATASKDQTLRLWKFDAEELVNHP 106
W+ G H L+ HC + +S + ++ D K V+ +D T+++W D L
Sbjct: 187 WRCG---RHSLQRIHCRSETSKGVYCLQYDDQKIVS---GLRDNTIKIW--DKSTL---- 234
Query: 107 KKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQV----SIKK 162
+IL GH SV + + ++ +GS D T+ +W N + + ++
Sbjct: 235 ---ECKRILTGHTGSV--LCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLH 289
Query: 163 RKGNNQVEEPQLEGEAIST--------------LVGHTQCVSSVVWPQQETIYSASWDHS 208
+ NN + + +I+ LVGH V+ V + + I SAS D +
Sbjct: 290 LRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF-DDKYIVSASGDRT 348
Query: 209 VRTWDVEMGKDLSDIFCGK-ALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQ 267
++ W+ + + + K + C+ L+ +G SD +R+WD + G V +
Sbjct: 349 IKVWNTSTCEFVRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDI-ECGACLRVLE 404
Query: 268 FSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTA 305
H + ++ NK ++S +YDGK+ +WDL A
Sbjct: 405 --GHEELVRCIRFDNK---RIVSGAYDGKIKVWDLIAA 437
Score = 139 (54.0 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 40/169 (23%), Positives = 81/169 (47%)
Query: 176 GEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLS--DIFCGK--ALNC 231
GE ++TL+ H + V + + + + S D S+ WD+ D++ + G A+N
Sbjct: 274 GEMLNTLIHHCEAVLHLRF-NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNV 332
Query: 232 IDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291
+D + +++A G D +++W+ T V + H I+ ++ ++ ++S
Sbjct: 333 VDF--DDKYIVSASG-DRTIKVWNT---STCEFVRTLNGHKRGIACLQYRDRL---VVSG 383
Query: 292 SYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGGVDSKLCV 340
S D + LWD+ L V++ H++ V C + ++SG D K+ V
Sbjct: 384 SSDNTIRLWDIECGACLRVLEGHEELVRCIRF-DNKRIVSGAYDGKIKV 431
>UNIPROTKB|F1RL85 [details] [associations]
symbol:GRWD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
GeneTree:ENSGT00550000075124 KO:K14848 OMA:NRLMMLR EMBL:FP102301
RefSeq:XP_003127319.1 UniGene:Ssc.24214 Ensembl:ENSSSCT00000003475
GeneID:100521273 KEGG:ssc:100521273 Uniprot:F1RL85
Length = 445
Score = 158 (60.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 34/126 (26%), Positives = 63/126 (50%)
Query: 183 VGHTQCVSSVVW-PQQETIY-SASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIG----G 236
VGHT+ V + W P ++T++ S S D S+R WD+ + + A + D+
Sbjct: 257 VGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTPAAHNGDVNVISWS 316
Query: 237 EGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGK 296
+ +GG D L++WD R+ + +PV F H + +++ +WH + ++ D +
Sbjct: 317 RQEPFLLSGGDDGALKVWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADNQ 376
Query: 297 VMLWDL 302
+ WDL
Sbjct: 377 ITQWDL 382
>SGD|S000000680 [details] [associations]
symbol:TUP1 "General repressor of transcription" species:4932
"Saccharomyces cerevisiae" [GO:0001191 "RNA polymerase II
transcription factor binding transcription factor activity involved
in negative regulation of transcription" evidence=IMP;IDA;IPI]
[GO:0017053 "transcriptional repressor complex" evidence=IDA]
[GO:0001198 "negative regulation of mating-type specific
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000433 "negative regulation of transcription from RNA
polymerase II promoter by glucose" evidence=IMP] [GO:2000531
"regulation of fatty acid biosynthetic process by regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0036033 "mediator
complex binding" evidence=IDA;IPI] [GO:0042826 "histone deacetylase
binding" evidence=IDA;IPI] [GO:0043486 "histone exchange"
evidence=IMP] [GO:0061418 "regulation of transcription from RNA
polymerase II promoter in response to hypoxia" evidence=IMP]
[GO:0061392 "regulation of transcription from RNA polymerase II
promoter in response to osmotic stress" evidence=IMP] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IMP] [GO:0042393 "histone
binding" evidence=IDA;IPI] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA;IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0035955 "negative regulation of dipeptide transport by negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IMP] [GO:0016584 "nucleosome positioning"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000680 GO:GO:0017053 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GO:GO:2001020 GO:GO:0043486 GO:GO:0042393 GO:GO:0042826
GO:GO:0061418 GO:GO:0016584 GO:GO:0043130 GO:GO:0080025
GO:GO:0001191 GO:GO:0035955 GO:GO:0000433 GO:GO:0007070
GO:GO:2000531 GO:GO:0061392 GeneTree:ENSGT00700000104507
GO:GO:0001198 GO:GO:0036033 HOGENOM:HOG000200558 KO:K06666
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:M31733 EMBL:M35861 EMBL:X16365 PIR:JN0133 RefSeq:NP_010007.1
PDB:1ERJ PDB:3VP8 PDB:3VP9 PDBsum:1ERJ PDBsum:3VP8 PDBsum:3VP9
ProteinModelPortal:P16649 SMR:P16649 DIP:DIP-512N IntAct:P16649
MINT:MINT-648551 STRING:P16649 PaxDb:P16649 PeptideAtlas:P16649
EnsemblFungi:YCR084C GeneID:850445 KEGG:sce:YCR084C CYGD:YCR084c
OMA:TISESCI EvolutionaryTrace:P16649 NextBio:966057
Genevestigator:P16649 GermOnline:YCR084C Uniprot:P16649
Length = 713
Score = 161 (61.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 71/246 (28%), Positives = 101/246 (41%)
Query: 23 HDDWVSAVDGSNPGF-ILTGCYDNLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKY 80
H+ + ++D G +++G D R+W G C+ L G V++V + DG KY
Sbjct: 484 HEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDG-VTTVAVSPGDG-KY 541
Query: 81 VTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWD 140
+ A S D+ +R+W + LV GHK SV+S+ G V SGS D
Sbjct: 542 I--AAGSLDRAVRVWDSETGFLVERLDSENESGT--GHKDSVYSVVFTRDGQSVVSGSLD 597
Query: 141 CTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQ-ET 199
++ LW ++ N S K + E T +GH V SV Q E
Sbjct: 598 RSVKLWNLQNA----NNKSDSKTPNSGTCEV---------TYIGHKDFVLSVATTQNDEY 644
Query: 200 IYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIG-GEGSAL------IAAGGSDPILR 252
I S S D V WD + G L + G + I + GS L A G D R
Sbjct: 645 ILSGSKDRGVLFWDKKSGNPLL-MLQGHRNSVISVAVANGSPLGPEYNVFATGSGDCKAR 703
Query: 253 IWDPRK 258
IW +K
Sbjct: 704 IWKYKK 709
Score = 112 (44.5 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 42/158 (26%), Positives = 71/158 (44%)
Query: 189 VSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCG--KALNCIDIGGEGSALIAAG 245
+ SV + P + + + + D +R WD+E K + I G + + +D G L++
Sbjct: 446 IRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVM-ILQGHEQDIYSLDYFPSGDKLVSGS 504
Query: 246 GSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTA 305
G D +RIWD R G + + ++ K ++ + S D V +WD T
Sbjct: 505 G-DRTVRIWDLRT-GQCSLTLSIEDGVTTVAVSPGDGK---YIAAGSLDRAVRVWDSETG 559
Query: 306 WPLSVIDS-------HKDKVLCADWWR-GDSVISGGVD 335
+ + +DS HKD V + R G SV+SG +D
Sbjct: 560 FLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLD 597
Score = 51 (23.0 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 26/132 (19%), Positives = 50/132 (37%)
Query: 23 HDDWVSAVDGSNPG-FILTGCYDNLGRVWKA--GGVCTHILE-----GHCGAVSSVNIIK 74
H V V SN G ++ TGC + +V++ G + + + H +++ N
Sbjct: 343 HTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANNHRNSITENNTTT 401
Query: 75 SDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMV 134
S +T T + T + A EL + + + + S+ G +
Sbjct: 402 STDNNTMTTTTTTTITTTAMTS--AAELAKDVENLNTSSS-PSSDLYIRSVCFSPDGKFL 458
Query: 135 CSGSWDCTISLW 146
+G+ D I +W
Sbjct: 459 ATGAEDRLIRIW 470
>TAIR|locus:2089303 [details] [associations]
symbol:AT3G16650 "AT3G16650" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AB022217 GO:GO:0080008 HOGENOM:HOG000207595
ProtClustDB:CLSN2685622 EMBL:X82826 EMBL:AY054181 EMBL:BT020378
IPI:IPI00521576 RefSeq:NP_566557.1 UniGene:At.104
ProteinModelPortal:Q39190 SMR:Q39190 IntAct:Q39190 STRING:Q39190
EnsemblPlants:AT3G16650.1 GeneID:820917 KEGG:ath:AT3G16650
GeneFarm:2851 TAIR:At3g16650 InParanoid:Q39190 OMA:HKKTVRA
PhylomeDB:Q39190 Genevestigator:Q39190 GermOnline:AT3G16650
Uniprot:Q39190
Length = 479
Score = 120 (47.3 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 37/141 (26%), Positives = 61/141 (43%)
Query: 181 TLVGHTQCVSSVVWPQQET-IYSASWDHSVRTWDVEMGKDLSDIFCGK--ALNCIDIGGE 237
TL GH V + + T ++SA D V+ WD+E K + + G + C+ +
Sbjct: 207 TLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRS-YHGHLHGVYCLALHPT 265
Query: 238 GSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKV 297
++ GG D + R+WD R T +F + S +I+ S+D +
Sbjct: 266 LDVVLT-GGRDSVCRVWDIR---TKMQIFVLPHDSDVFSVLARPTDP--QVITGSHDSTI 319
Query: 298 MLWDLRTAWPLSVIDSHKDKV 318
WDLR ++ I +HK V
Sbjct: 320 KFWDLRYGKSMATITNHKKTV 340
Score = 83 (34.3 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 14/37 (37%), Positives = 24/37 (64%)
Query: 110 RSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLW 146
+++++L+GH V S+A + S C+GS D TI +W
Sbjct: 161 KNYRVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIW 197
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 157 (60.3 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 65/301 (21%), Positives = 125/301 (41%)
Query: 48 RVWK-AGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHP 106
+VW G L+GH +V ++ ++ L +A+ S D T++LW F E +
Sbjct: 133 KVWDYEAGDFERTLKGHTDSVQDISFDQTGKL----LASCSADMTIKLWDFQGFECI--- 185
Query: 107 KKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGN 166
+ + GH +V S+A +G+ + S S D T+ +W A G +K G+
Sbjct: 186 ------RTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEV----ATG--YCVKTFTGH 233
Query: 167 NQ---VEEPQLEGEAISTLVGHTQCVSS-VVWPQQETIYSASWDHSVR--TWDVEMGKDL 220
+ + P +G +++ + Q V VV ++ +H V +W E
Sbjct: 234 REWVRMVRPNQDGTLLASC-SNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPT 292
Query: 221 SDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKW 280
G N G+ + +G D +++WD T + H++W+ +
Sbjct: 293 ISEATGSE-N--KKSGKPGPFLLSGSRDKTIKMWDI---STGMCLMTLVGHDNWVRGVLF 346
Query: 281 HNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDS-VISGGVDSKLC 339
H F ++S + D + +WD + + + +H+ V D+ + V++G VD +
Sbjct: 347 HPGGRF-VVSCADDKTLRIWDYKNKRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVK 405
Query: 340 V 340
V
Sbjct: 406 V 406
>UNIPROTKB|F1P0F4 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00821846
Ensembl:ENSGALT00000040449 ArrayExpress:F1P0F4 Uniprot:F1P0F4
Length = 661
Score = 160 (61.4 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 41/127 (32%), Positives = 67/127 (52%)
Query: 179 ISTLVGHTQCVSSV-VWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNC-IDIGG 236
+ +L GHT + S+ + ++E I + S S+R WD+E K L + KA C +D
Sbjct: 56 VMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHP 115
Query: 237 EGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWH-NKSWFHLISASYDG 295
GS +A+G D +++WD R+ G +F++ SH + ++ + W L SA+ D
Sbjct: 116 YGS-FVASGSLDTDIKLWDVRRKGC---IFKYKSHTQAVRCLRFSPDGKW--LASAADDH 169
Query: 296 KVMLWDL 302
V LWDL
Sbjct: 170 TVKLWDL 176
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 158 (60.7 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 87/343 (25%), Positives = 142/343 (41%)
Query: 23 HDDWVSAVDGSNPGFIL-TGCYDNLGRVW--KAGGVCTHILEGHCGAVSSVN---IIKSD 76
H WV ++ S G L +GC + +W G L GH +++++ + +
Sbjct: 156 HRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPLHANP 215
Query: 77 GLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCS 136
+YV A++SKD ++R+W A R + L GH SV + G ++ S
Sbjct: 216 ECRYV--ASSSKDGSVRVWDTTAG---------RCERTLTGHAQSVTCLRWGGDG-LLYS 263
Query: 137 GSWDCTISLWRTNDS------DAAGNQVSIKK-------RKGNNQVEEPQLEGE----AI 179
S D TI +WR +D G+ V+ R G + E + + ++
Sbjct: 264 ASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASVNAQDLRGSL 323
Query: 180 STLVGHTQCVSSVVWPQ-QETIYSASWDHSVRTWD-VEMGKDLSDIFCGKALNCIDIGGE 237
L ++V Q E + S S D ++ W E K L+ + +AL +
Sbjct: 324 QELKERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVVFSP 383
Query: 238 GSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKV 297
S +IA+ D +++WD R T + H + + W S L+S S D +
Sbjct: 384 DSRVIASASFDKSIKLWDGR---TGKYLASLRGHVAAVYQIAWSADSRL-LVSGSSDSTL 439
Query: 298 MLWDLRTAWPLSV-IDSHKDKVLCADWWR-GDSVISGGVDSKL 338
+WD++ A LS + H D+V DW G V SGG D L
Sbjct: 440 KVWDVK-AQKLSTDLPGHADEVYAVDWSPDGQRVASGGKDKCL 481
Score = 143 (55.4 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 47/160 (29%), Positives = 73/160 (45%)
Query: 180 STLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFC-GKALNCIDIGG- 236
S+L GH++ V SV + P + + S S D +VR WD + + C G + I
Sbjct: 109 SSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWD--LSTETPHFTCQGHRHWVLSISWS 166
Query: 237 -EGSALIAAGGSDPILRIWDPRKPGTSAPVFQ-FSSHNSWISACKW---H-NKSWFHLIS 290
+G L A+G + + +WDP T V + + H+ WI+A W H N ++ S
Sbjct: 167 PDGKKL-ASGCKNGQILLWDP---STGKQVGRALTGHSKWITALSWEPLHANPECRYVAS 222
Query: 291 ASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVI 330
+S DG V +WD + H V C W GD ++
Sbjct: 223 SSKDGSVRVWDTTAGRCERTLTGHAQSVTCLRWG-GDGLL 261
Score = 115 (45.5 bits), Expect = 0.00091, P = 0.00091
Identities = 49/178 (27%), Positives = 72/178 (40%)
Query: 56 CTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEE----LVNHPKKIRS 111
CT LEGH AV SV G KY+ A+ S D T+R W E H + S
Sbjct: 107 CTSSLEGHSEAVISV-AFSPTG-KYL--ASGSGDTTVRFWDLSTETPHFTCQGHRHWVLS 162
Query: 112 F-------KILRGHKASVHSIAAETSGNMV---CSG--SWDCTISLWRTNDSDAAGNQVS 159
K+ G K + ++G V +G W +S W ++ V+
Sbjct: 163 ISWSPDGKKLASGCKNGQILLWDPSTGKQVGRALTGHSKWITALS-WEPLHANPECRYVA 221
Query: 160 IKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMG 217
+ G+ +V + G TL GH Q V+ + W +YSAS D +++ W G
Sbjct: 222 SSSKDGSVRVWDTTA-GRCERTLTGHAQSVTCLRWGGDGLLYSASQDRTIKVWRAHDG 278
>UNIPROTKB|F1MVN1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:DAAA02058986 EMBL:DAAA02058987
EMBL:DAAA02058988 EMBL:DAAA02058989 EMBL:DAAA02058990
EMBL:DAAA02058991 IPI:IPI00717164 UniGene:Bt.25271
Ensembl:ENSBTAT00000009830 Uniprot:F1MVN1
Length = 569
Score = 159 (61.0 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 66/282 (23%), Positives = 122/282 (43%)
Query: 38 ILTGCYDNLGRVW-KAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWK 96
I++G DN ++W K+ C IL GH G SV ++ D + T S D T+R+W
Sbjct: 280 IVSGLRDNTIKIWDKSTLECKRILTGHTG---SVLCLQYDER---VIITGSSDSTVRVWD 333
Query: 97 FDAEELVN----HPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSD 152
+ E++N H + + + G + + +M + D T+
Sbjct: 334 VNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDM--ASPTDITLRRVLVGHR- 390
Query: 153 AAGNQVS-----IKKRKGNNQVEEPQLEG-EAISTLVGHTQCVSSVVWPQQETIYSASWD 206
AA N V I G+ ++ E + TL GH + ++ + + + + S S D
Sbjct: 391 AAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY-RDRLVVSGSSD 449
Query: 207 HSVRTWDVEMGKDLSDIFCGKAL-NCIDIGGEGSALIAAGGSDPILRIWD------PRKP 259
+++R WD+E G L + + L CI + I +G D +++WD PR P
Sbjct: 450 NTIRLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLVAALDPRAP 506
Query: 260 GTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWD 301
+ + H+ + ++ F ++S+S+D +++WD
Sbjct: 507 AGTLCLRTLVEHSGRVFRLQFDE---FQIVSSSHDDTILIWD 545
Score = 152 (58.6 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 65/278 (23%), Positives = 120/278 (43%)
Query: 50 WKAGGVCTHILEG-HCGAVSSVNI--IKSDGLKYVTVATASKDQTLRLWKFDAEELVNHP 106
W+ G H L+ HC + +S + ++ D K V+ +D T+++W D L
Sbjct: 250 WRCG---RHSLQRIHCRSETSKGVYCLQYDDQKIVS---GLRDNTIKIW--DKSTL---- 297
Query: 107 KKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQV----SIKK 162
+IL GH SV + + ++ +GS D T+ +W N + + ++
Sbjct: 298 ---ECKRILTGHTGSV--LCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLH 352
Query: 163 RKGNNQVEEPQLEGEAIST--------------LVGHTQCVSSVVWPQQETIYSASWDHS 208
+ NN + + +I+ LVGH V+ V + + I SAS D +
Sbjct: 353 LRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF-DDKYIVSASGDRT 411
Query: 209 VRTWDVEMGKDLSDIFCGK-ALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQ 267
++ W+ + + + K + C+ L+ +G SD +R+WD + G V +
Sbjct: 412 IKVWNTSTCEFVRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDI-ECGACLRVLE 467
Query: 268 FSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTA 305
H + ++ NK ++S +YDGK+ +WDL A
Sbjct: 468 --GHEELVRCIRFDNK---RIVSGAYDGKIKVWDLVAA 500
Score = 139 (54.0 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 40/169 (23%), Positives = 81/169 (47%)
Query: 176 GEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLS--DIFCGK--ALNC 231
GE ++TL+ H + V + + + + S D S+ WD+ D++ + G A+N
Sbjct: 337 GEMLNTLIHHCEAVLHLRF-NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNV 395
Query: 232 IDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291
+D + +++A G D +++W+ T V + H I+ ++ ++ ++S
Sbjct: 396 VDF--DDKYIVSASG-DRTIKVWNT---STCEFVRTLNGHKRGIACLQYRDRL---VVSG 446
Query: 292 SYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGGVDSKLCV 340
S D + LWD+ L V++ H++ V C + ++SG D K+ V
Sbjct: 447 SSDNTIRLWDIECGACLRVLEGHEELVRCIRF-DNKRIVSGAYDGKIKV 494
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 159 (61.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 71/236 (30%), Positives = 103/236 (43%)
Query: 23 HDDWVSAVDGSNPG-FILTGCYDNLGRVWK-AGGVCTHILEGHCGAVSSVNIIKSDGLKY 80
H+ + ++D + G +I +G D R+W A G + L G V++V + DGL Y
Sbjct: 357 HEQDIYSLDFAGNGRYIASGSGDKTVRLWDIAEGKLVYTLSIEDG-VTTV-AMSPDGL-Y 413
Query: 81 VTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWD 140
V A S D+T+R+W LV +++ + GHK SV+S+A +G + SGS D
Sbjct: 414 V--AAGSLDKTVRVWDTTTGYLV---ERLENPD---GHKDSVYSVAFAPNGKELVSGSLD 465
Query: 141 CTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSV-VWPQQET 199
TI LW N N KG G+ T GH V SV + P
Sbjct: 466 KTIKLWELNLPRQQYNSAG----KG----------GKCHRTFEGHKDFVLSVCLTPDGHW 511
Query: 200 IYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSA-LIAAGGSDPILRIW 254
+ S S D V+ WD G + + G + I + + L A G D RIW
Sbjct: 512 VMSGSKDRGVQFWDPITG-NAQMMLQGHKNSVISVAPSPTGNLFATGSGDMRARIW 566
>RGD|1310649 [details] [associations]
symbol:Grwd1 "glutamate-rich WD repeat containing 1"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310649 GO:GO:0005737
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 CTD:83743 HOGENOM:HOG000036730
HOVERGEN:HBG051847 KO:K14848 OrthoDB:EOG4CG084 EMBL:BC083883
IPI:IPI00367307 RefSeq:NP_001012067.1 UniGene:Rn.33523
ProteinModelPortal:Q5XI13 STRING:Q5XI13 PRIDE:Q5XI13 GeneID:308592
KEGG:rno:308592 UCSC:RGD:1310649 NextBio:659230 ArrayExpress:Q5XI13
Genevestigator:Q5XI13 GermOnline:ENSRNOG00000021058 Uniprot:Q5XI13
Length = 445
Score = 157 (60.3 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 34/126 (26%), Positives = 63/126 (50%)
Query: 183 VGHTQCVSSVVW-PQQETIY-SASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIG----G 236
VGHT+ V + W P ++T++ S S D S+R WD+ + + A + D+
Sbjct: 257 VGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPGKACMLTTAAAHDGDVNVISWS 316
Query: 237 EGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGK 296
+ +GG D L++WD R+ + +PV F H + +++ +WH + ++ D +
Sbjct: 317 RREPFLLSGGDDGTLKVWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADNQ 376
Query: 297 VMLWDL 302
+ WDL
Sbjct: 377 ITQWDL 382
Score = 115 (45.5 bits), Expect = 0.00080, P = 0.00079
Identities = 28/104 (26%), Positives = 52/104 (50%)
Query: 241 LIAAGGSDPILRIWDPRK-PGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVML 299
+ A+ +D +RIWD R PG + + ++H+ ++ W + F L+S DG + +
Sbjct: 275 VFASCSADASIRIWDIRAAPGKACMLTTAAAHDGDVNVISWSRREPF-LLSGGDDGTLKV 333
Query: 300 WDLR---TAWPLSVIDSHKDKVLCADWWRGDSVI--SGGVDSKL 338
WDLR + P++ H V +W DS + + G D+++
Sbjct: 334 WDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADNQI 377
>UNIPROTKB|E2RDC4 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA] [GO:0061136 "regulation of proteasomal
protein catabolic process" evidence=IEA] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945 KO:K03362
OMA:NAYLKPM GeneTree:ENSGT00690000101849 EMBL:AAEX03015480
EMBL:AAEX03015479 RefSeq:XP_543980.3 ProteinModelPortal:E2RDC4
Ensembl:ENSCAFT00000015696 GeneID:486851 KEGG:cfa:486851
NextBio:20860562 Uniprot:E2RDC4
Length = 605
Score = 159 (61.0 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 66/282 (23%), Positives = 122/282 (43%)
Query: 38 ILTGCYDNLGRVW-KAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWK 96
I++G DN ++W K+ C IL GH G SV ++ D + T S D T+R+W
Sbjct: 316 IVSGLRDNTIKIWDKSTLECKRILTGHTG---SVLCLQYDER---VIITGSSDSTVRVWD 369
Query: 97 FDAEELVN----HPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSD 152
+ E++N H + + + G + + +M + D T+
Sbjct: 370 VNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDM--ASPTDITLRRVLVGHR- 426
Query: 153 AAGNQVS-----IKKRKGNNQVEEPQLEG-EAISTLVGHTQCVSSVVWPQQETIYSASWD 206
AA N V I G+ ++ E + TL GH + ++ + + + + S S D
Sbjct: 427 AAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY-RDRLVVSGSSD 485
Query: 207 HSVRTWDVEMGKDLSDIFCGKAL-NCIDIGGEGSALIAAGGSDPILRIWD------PRKP 259
+++R WD+E G L + + L CI + I +G D +++WD PR P
Sbjct: 486 NTIRLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLVAALDPRAP 542
Query: 260 GTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWD 301
+ + H+ + ++ F ++S+S+D +++WD
Sbjct: 543 AGTLCLRTLVEHSGRVFRLQFDE---FQIVSSSHDDTILIWD 581
Score = 152 (58.6 bits), Expect = 9.6e-08, P = 9.6e-08
Identities = 65/278 (23%), Positives = 120/278 (43%)
Query: 50 WKAGGVCTHILEG-HCGAVSSVNI--IKSDGLKYVTVATASKDQTLRLWKFDAEELVNHP 106
W+ G H L+ HC + +S + ++ D K V+ +D T+++W D L
Sbjct: 286 WRCG---RHSLQRIHCRSETSKGVYCLQYDDQKIVS---GLRDNTIKIW--DKSTL---- 333
Query: 107 KKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQV----SIKK 162
+IL GH SV + + ++ +GS D T+ +W N + + ++
Sbjct: 334 ---ECKRILTGHTGSV--LCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLH 388
Query: 163 RKGNNQVEEPQLEGEAIST--------------LVGHTQCVSSVVWPQQETIYSASWDHS 208
+ NN + + +I+ LVGH V+ V + + I SAS D +
Sbjct: 389 LRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF-DDKYIVSASGDRT 447
Query: 209 VRTWDVEMGKDLSDIFCGK-ALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQ 267
++ W+ + + + K + C+ L+ +G SD +R+WD + G V +
Sbjct: 448 IKVWNTSTCEFVRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDI-ECGACLRVLE 503
Query: 268 FSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTA 305
H + ++ NK ++S +YDGK+ +WDL A
Sbjct: 504 --GHEELVRCIRFDNK---RIVSGAYDGKIKVWDLVAA 536
Score = 139 (54.0 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 40/169 (23%), Positives = 81/169 (47%)
Query: 176 GEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLS--DIFCGK--ALNC 231
GE ++TL+ H + V + + + + S D S+ WD+ D++ + G A+N
Sbjct: 373 GEMLNTLIHHCEAVLHLRF-NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNV 431
Query: 232 IDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291
+D + +++A G D +++W+ T V + H I+ ++ ++ ++S
Sbjct: 432 VDF--DDKYIVSASG-DRTIKVWNT---STCEFVRTLNGHKRGIACLQYRDRL---VVSG 482
Query: 292 SYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGGVDSKLCV 340
S D + LWD+ L V++ H++ V C + ++SG D K+ V
Sbjct: 483 SSDNTIRLWDIECGACLRVLEGHEELVRCIRF-DNKRIVSGAYDGKIKV 530
>POMBASE|SPBC1718.01 [details] [associations]
symbol:pop1 "cullin 1 adaptor protein Pop1" species:4896
"Schizosaccharomyces pombe" [GO:0000747 "conjugation with cellular
fusion" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0006995 "cellular response to nitrogen
starvation" evidence=IGI] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008054 "cyclin catabolic process"
evidence=IMP] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPBC1718.01 GO:GO:0005634 GO:GO:0007346 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR SUPFAM:SSF81383 GO:GO:0019005
GO:GO:0008054 GO:GO:0006995 GO:GO:0000747 KO:K03361
OrthoDB:EOG4B2X5M EMBL:Y08391 PIR:T45136 PIR:T50329
RefSeq:XP_001713146.1 ProteinModelPortal:P87060 IntAct:P87060
STRING:P87060 EnsemblFungi:SPBC1718.01.1 GeneID:2540511
KEGG:spo:SPBC1718.01 OMA:NRCISAS NextBio:20801638 Uniprot:P87060
Length = 775
Score = 160 (61.4 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 81/314 (25%), Positives = 132/314 (42%)
Query: 13 APQKEEEPS--LHD-DWVSAVDGSNPGFILTGCYDNLGRVWKAGGVCTHILEGHCGAVSS 69
AP+K + S +H ++ + + I++ C + GV LE H G V +
Sbjct: 392 APEKIKRCSFPIHGVRLITKLQFDDDKIIVSTCSPRINIYDTKTGVLIRSLEEHEGDVWT 451
Query: 70 VNIIKSDGLKYVTVATASKDQTLRLWKFDAEE----LVNHPKKIRSFKILRGHKASVHSI 125
+ D T+ T S D+T+R+W E H IR KI++G++++ +
Sbjct: 452 FEYV-GD-----TLVTGSTDRTVRVWDLRTGECKQVFYGHTSTIRCIKIVQGNQSTTDTD 505
Query: 126 --------AAETSGNM---VCSGSWDCTISLWRTNDSDAAGNQVSIKKRKG-NNQVEEPQ 173
A+ + +M + S S DCTI LW D V++ + NN
Sbjct: 506 DVEKENRPASNDANSMPPYIISSSRDCTIRLWSLPCLDDPPF-VNVNENPDQNNDFTSAT 564
Query: 174 LEGEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDI--FCGKALNC 231
I TL GHT V V + I SAS+D ++R W G L + G+ +
Sbjct: 565 TNPFYIRTLRGHTDSVREVAC-LGDLIVSASYDGTLRVWKASTGVCLHVLRGHVGRVYS- 622
Query: 232 IDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQ-FSSHNSWISACKWHNKSWFHLIS 290
+ I I+AG +D +RIW+ S + Q H++ +S + N++ S
Sbjct: 623 VTINPSRQQCISAG-TDAKIRIWNLE----SGELLQTLHGHSNLVSQVTF-NQNILVSAS 676
Query: 291 ASYDGKVMLWDLRT 304
A D + +WDL T
Sbjct: 677 APPDTSLRVWDLNT 690
>UNIPROTKB|Q68DS0 [details] [associations]
symbol:DKFZp781N011 "Putative uncharacterized protein
DKFZp781N011" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AL627424 EMBL:AL133387 EMBL:AL445463
RefSeq:NP_003930.1 RefSeq:NP_378663.1 UniGene:Hs.643802
UniGene:Hs.713753 GeneID:8945 KEGG:hsa:8945 CTD:8945 HGNC:HGNC:1144
HOVERGEN:HBG002521 KO:K03362 ChiTaRS:BTRC GenomeRNAi:8945
EMBL:CR749295 IPI:IPI01012795 RefSeq:NP_001243785.1 SMR:Q68DS0
STRING:Q68DS0 Ensembl:ENST00000393441 Uniprot:Q68DS0
Length = 564
Score = 158 (60.7 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 65/282 (23%), Positives = 121/282 (42%)
Query: 38 ILTGCYDNLGRVWKAGGV-CTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWK 96
I++G DN ++W + C IL GH G SV ++ D + T S D T+R+W
Sbjct: 275 IVSGLRDNTIKIWDKNTLECKRILTGHTG---SVLCLQYDER---VIITGSSDSTVRVWD 328
Query: 97 FDAEELVN----HPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSD 152
+ E++N H + + + G + + +M + D T+
Sbjct: 329 VNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDM--ASPTDITLRRVLVGHR- 385
Query: 153 AAGNQVS-----IKKRKGNNQVEEPQLEG-EAISTLVGHTQCVSSVVWPQQETIYSASWD 206
AA N V I G+ ++ E + TL GH + ++ + + + + S S D
Sbjct: 386 AAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY-RDRLVVSGSSD 444
Query: 207 HSVRTWDVEMGKDLSDIFCGKAL-NCIDIGGEGSALIAAGGSDPILRIWD------PRKP 259
+++R WD+E G L + + L CI + I +G D +++WD PR P
Sbjct: 445 NTIRLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLVAALDPRAP 501
Query: 260 GTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWD 301
+ + H+ + ++ F ++S+S+D +++WD
Sbjct: 502 AGTLCLRTLVEHSGRVFRLQFDE---FQIVSSSHDDTILIWD 540
Score = 152 (58.6 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 65/278 (23%), Positives = 120/278 (43%)
Query: 50 WKAGGVCTHILEG-HCGAVSSVNI--IKSDGLKYVTVATASKDQTLRLWKFDAEELVNHP 106
W+ G H L+ HC + +S + ++ D K V+ +D T+++W D L
Sbjct: 245 WRCG---RHSLQRIHCRSETSKGVYCLQYDDQKIVS---GLRDNTIKIW--DKNTL---- 292
Query: 107 KKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQV----SIKK 162
+IL GH SV + + ++ +GS D T+ +W N + + ++
Sbjct: 293 ---ECKRILTGHTGSV--LCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLH 347
Query: 163 RKGNNQVEEPQLEGEAIST--------------LVGHTQCVSSVVWPQQETIYSASWDHS 208
+ NN + + +I+ LVGH V+ V + + I SAS D +
Sbjct: 348 LRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF-DDKYIVSASGDRT 406
Query: 209 VRTWDVEMGKDLSDIFCGK-ALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQ 267
++ W+ + + + K + C+ L+ +G SD +R+WD + G V +
Sbjct: 407 IKVWNTSTCEFVRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDI-ECGACLRVLE 462
Query: 268 FSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTA 305
H + ++ NK ++S +YDGK+ +WDL A
Sbjct: 463 --GHEELVRCIRFDNK---RIVSGAYDGKIKVWDLVAA 495
Score = 139 (54.0 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 40/169 (23%), Positives = 81/169 (47%)
Query: 176 GEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLS--DIFCGK--ALNC 231
GE ++TL+ H + V + + + + S D S+ WD+ D++ + G A+N
Sbjct: 332 GEMLNTLIHHCEAVLHLRF-NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNV 390
Query: 232 IDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291
+D + +++A G D +++W+ T V + H I+ ++ ++ ++S
Sbjct: 391 VDF--DDKYIVSASG-DRTIKVWNT---STCEFVRTLNGHKRGIACLQYRDRL---VVSG 441
Query: 292 SYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGGVDSKLCV 340
S D + LWD+ L V++ H++ V C + ++SG D K+ V
Sbjct: 442 SSDNTIRLWDIECGACLRVLEGHEELVRCIRF-DNKRIVSGAYDGKIKV 489
WARNING: HSPs involving 640 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.132 0.426 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 347 347 0.00098 116 3 11 22 0.42 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 890
No. of states in DFA: 630 (67 KB)
Total size of DFA: 294 KB (2148 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 29.30u 0.08s 29.38t Elapsed: 00:00:01
Total cpu time: 29.39u 0.09s 29.48t Elapsed: 00:00:01
Start: Sat May 11 09:57:02 2013 End: Sat May 11 09:57:03 2013
WARNINGS ISSUED: 2