Query 036314
Match_columns 347
No_of_seqs 218 out of 1974
Neff 10.3
Searched_HMMs 46136
Date Fri Mar 29 11:24:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036314.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/036314hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0313 Microtubule binding pr 100.0 1.7E-58 3.6E-63 385.5 31.0 337 1-346 82-420 (423)
2 KOG0272 U4/U6 small nuclear ri 100.0 1.1E-52 2.4E-57 355.0 24.0 283 20-342 171-458 (459)
3 KOG0271 Notchless-like WD40 re 100.0 9.9E-52 2.1E-56 345.3 25.9 304 1-344 86-439 (480)
4 KOG0271 Notchless-like WD40 re 100.0 4.7E-47 1E-51 317.4 25.2 284 20-343 153-480 (480)
5 KOG0279 G protein beta subunit 100.0 1.5E-41 3.2E-46 273.8 29.8 279 19-343 10-312 (315)
6 KOG0315 G-protein beta subunit 100.0 2.3E-41 5.1E-46 268.5 28.5 269 36-344 11-288 (311)
7 KOG0272 U4/U6 small nuclear ri 100.0 6.3E-43 1.4E-47 295.9 20.4 242 62-346 173-420 (459)
8 KOG0295 WD40 repeat-containing 100.0 2.2E-41 4.9E-46 281.7 24.0 282 20-342 104-404 (406)
9 KOG0286 G-protein beta subunit 100.0 5.4E-40 1.2E-44 266.3 28.9 291 16-342 47-343 (343)
10 KOG0281 Beta-TrCP (transducin 100.0 3.6E-42 7.9E-47 285.0 16.5 276 17-343 190-476 (499)
11 KOG0285 Pleiotropic regulator 100.0 3.5E-40 7.5E-45 274.1 25.0 278 20-342 147-437 (460)
12 KOG0282 mRNA splicing factor [ 100.0 2E-39 4.3E-44 279.0 19.7 288 14-342 203-503 (503)
13 KOG0318 WD40 repeat stress pro 100.0 2.4E-37 5.2E-42 268.6 32.6 302 12-344 177-560 (603)
14 KOG0284 Polyadenylation factor 100.0 2.7E-39 5.9E-44 272.8 17.5 278 24-344 96-380 (464)
15 KOG0279 G protein beta subunit 100.0 2.9E-37 6.2E-42 249.0 27.4 250 57-344 8-262 (315)
16 KOG0319 WD40-repeat-containing 100.0 8.2E-38 1.8E-42 281.2 25.9 312 22-344 103-535 (775)
17 KOG0645 WD40 repeat protein [G 100.0 1.8E-36 4E-41 243.4 29.9 281 19-343 9-310 (312)
18 KOG0286 G-protein beta subunit 100.0 1.3E-36 2.8E-41 246.8 27.9 252 57-344 48-303 (343)
19 KOG0273 Beta-transducin family 100.0 5.6E-37 1.2E-41 263.1 26.3 277 22-342 233-521 (524)
20 KOG0293 WD40 repeat-containing 100.0 3.1E-37 6.8E-42 260.8 23.7 288 14-343 214-512 (519)
21 KOG0319 WD40-repeat-containing 100.0 7.3E-37 1.6E-41 275.1 26.6 295 20-344 319-619 (775)
22 KOG0263 Transcription initiati 100.0 5.6E-37 1.2E-41 278.2 24.7 257 54-344 368-649 (707)
23 KOG0273 Beta-transducin family 100.0 8.3E-37 1.8E-41 262.1 24.2 280 22-344 176-482 (524)
24 KOG0316 Conserved WD40 repeat- 100.0 3.1E-36 6.7E-41 237.7 24.9 281 18-342 11-297 (307)
25 KOG0266 WD40 repeat-containing 100.0 1.3E-35 2.9E-40 273.9 29.5 281 22-344 157-454 (456)
26 PLN00181 protein SPA1-RELATED; 100.0 9.9E-35 2.2E-39 286.5 37.4 283 20-344 479-793 (793)
27 KOG0265 U5 snRNP-specific prot 100.0 3E-35 6.4E-40 239.6 26.6 280 20-340 43-334 (338)
28 KOG0277 Peroxisomal targeting 100.0 1.9E-35 4.2E-40 235.5 22.7 261 44-342 37-307 (311)
29 KOG0278 Serine/threonine kinas 100.0 4.1E-36 8.8E-41 238.9 18.6 286 17-347 7-300 (334)
30 KOG0263 Transcription initiati 100.0 4.9E-35 1.1E-39 265.6 25.3 238 24-304 378-650 (707)
31 cd00200 WD40 WD40 domain, foun 100.0 1.5E-33 3.3E-38 244.4 33.5 280 20-342 5-289 (289)
32 KOG0295 WD40 repeat-containing 100.0 3E-35 6.6E-40 245.2 19.9 257 47-344 91-364 (406)
33 KOG0296 Angio-associated migra 100.0 1.3E-33 2.9E-38 235.5 27.8 280 20-343 60-397 (399)
34 KOG0281 Beta-TrCP (transducin 100.0 1.2E-35 2.7E-40 246.3 13.2 244 17-307 230-481 (499)
35 KOG0265 U5 snRNP-specific prot 100.0 6.4E-34 1.4E-38 231.9 22.6 246 58-345 41-297 (338)
36 KOG0645 WD40 repeat protein [G 100.0 1.5E-32 3.2E-37 221.0 28.8 249 56-343 6-260 (312)
37 KOG0268 Sof1-like rRNA process 100.0 1.8E-34 4E-39 240.4 17.9 275 20-344 62-345 (433)
38 KOG0315 G-protein beta subunit 100.0 2.3E-32 5E-37 217.4 27.0 257 24-324 40-309 (311)
39 KOG0276 Vesicle coat complex C 100.0 7.1E-33 1.5E-37 245.3 26.7 281 22-343 11-298 (794)
40 KOG0274 Cdc4 and related F-box 100.0 5.8E-33 1.3E-37 256.2 27.3 275 22-346 206-484 (537)
41 KOG0318 WD40 repeat stress pro 100.0 4.6E-32 9.9E-37 235.9 30.8 280 19-343 54-391 (603)
42 KOG0285 Pleiotropic regulator 100.0 4.4E-33 9.5E-38 231.9 22.5 245 56-344 143-389 (460)
43 KOG0291 WD40-repeat-containing 100.0 1E-31 2.3E-36 242.5 29.9 305 2-344 170-550 (893)
44 KOG0275 Conserved WD40 repeat- 100.0 3.2E-33 7E-38 230.2 17.9 278 22-342 211-507 (508)
45 KOG0284 Polyadenylation factor 100.0 1E-33 2.3E-38 239.1 15.0 243 20-303 134-380 (464)
46 KOG0288 WD40 repeat protein Ti 100.0 1.5E-33 3.3E-38 238.4 15.8 278 20-342 171-459 (459)
47 KOG0292 Vesicle coat complex C 100.0 2.4E-32 5.1E-37 250.3 24.8 275 25-341 10-318 (1202)
48 PLN00181 protein SPA1-RELATED; 100.0 8.1E-31 1.8E-35 258.8 34.3 265 44-343 457-737 (793)
49 KOG0301 Phospholipase A2-activ 100.0 6.3E-32 1.4E-36 241.9 23.8 275 19-344 9-288 (745)
50 KOG0276 Vesicle coat complex C 100.0 4.8E-32 1E-36 240.1 21.7 246 58-344 7-257 (794)
51 KOG0292 Vesicle coat complex C 100.0 3.5E-32 7.5E-37 249.3 21.5 245 60-344 5-280 (1202)
52 KOG0283 WD40 repeat-containing 100.0 8.7E-32 1.9E-36 246.4 24.0 243 16-303 259-576 (712)
53 KOG0266 WD40 repeat-containing 100.0 6.7E-31 1.5E-35 242.6 29.0 250 57-344 151-409 (456)
54 KOG0306 WD40-repeat-containing 100.0 4.2E-31 9.2E-36 238.5 25.7 290 20-343 369-663 (888)
55 KOG0274 Cdc4 and related F-box 100.0 2.7E-31 5.8E-36 245.2 24.9 253 20-323 245-503 (537)
56 KOG0316 Conserved WD40 repeat- 100.0 4.5E-31 9.7E-36 208.5 22.0 243 55-344 8-257 (307)
57 KOG0264 Nucleosome remodeling 100.0 4.2E-31 9.2E-36 226.4 22.5 262 60-344 120-404 (422)
58 KOG0277 Peroxisomal targeting 100.0 2.3E-31 5E-36 212.3 17.9 241 23-302 59-308 (311)
59 PTZ00421 coronin; Provisional 100.0 1.4E-29 3.1E-34 233.3 32.4 268 25-325 21-313 (493)
60 KOG0291 WD40-repeat-containing 100.0 1.2E-29 2.5E-34 229.3 30.6 280 22-344 305-612 (893)
61 KOG0310 Conserved WD40 repeat- 100.0 1.6E-30 3.5E-35 224.6 23.0 272 24-341 26-306 (487)
62 KOG0300 WD40 repeat-containing 100.0 3.8E-30 8.2E-35 211.6 22.5 291 19-344 143-476 (481)
63 KOG0641 WD40 repeat protein [G 100.0 1.2E-28 2.6E-33 193.9 29.6 286 21-344 29-349 (350)
64 KOG0647 mRNA export protein (c 100.0 2.6E-29 5.6E-34 205.2 24.6 277 15-335 18-315 (347)
65 KOG0306 WD40-repeat-containing 100.0 2.3E-29 4.9E-34 227.4 26.3 316 19-345 102-623 (888)
66 KOG0313 Microtubule binding pr 100.0 7.9E-30 1.7E-34 214.0 20.9 250 19-303 139-418 (423)
67 KOG0643 Translation initiation 100.0 1.4E-29 3E-34 203.5 20.6 287 19-342 5-315 (327)
68 KOG0294 WD40 repeat-containing 100.0 4.3E-29 9.4E-34 205.0 23.3 256 22-323 41-305 (362)
69 KOG0296 Angio-associated migra 100.0 5.2E-29 1.1E-33 208.1 24.2 280 5-303 86-398 (399)
70 KOG0640 mRNA cleavage stimulat 100.0 3.7E-29 8E-34 205.1 22.3 286 20-342 108-424 (430)
71 cd00200 WD40 WD40 domain, foun 100.0 3E-28 6.4E-33 211.1 29.0 244 58-344 3-249 (289)
72 PTZ00420 coronin; Provisional 100.0 3.2E-28 6.9E-33 225.6 30.1 253 40-327 49-318 (568)
73 KOG0305 Anaphase promoting com 100.0 3E-28 6.4E-33 217.7 28.1 270 30-343 183-460 (484)
74 KOG0293 WD40 repeat-containing 100.0 2.3E-29 5.1E-34 213.2 19.1 259 3-305 250-515 (519)
75 KOG0283 WD40 repeat-containing 100.0 4.8E-29 1E-33 228.5 22.3 253 58-344 260-576 (712)
76 KOG1036 Mitotic spindle checkp 100.0 7.7E-28 1.7E-32 197.2 26.3 276 14-333 3-293 (323)
77 KOG0278 Serine/threonine kinas 100.0 4.3E-30 9.2E-35 204.7 12.6 244 21-308 56-302 (334)
78 KOG0772 Uncharacterized conser 100.0 7.4E-29 1.6E-33 215.5 20.7 307 9-342 152-485 (641)
79 KOG0264 Nucleosome remodeling 100.0 2.2E-28 4.8E-33 209.8 23.3 256 21-304 121-405 (422)
80 KOG1332 Vesicle coat complex C 100.0 8E-29 1.7E-33 196.8 18.5 251 59-343 6-285 (299)
81 KOG0308 Conserved WD40 repeat- 100.0 1.2E-28 2.5E-33 219.6 20.0 307 2-344 4-327 (735)
82 KOG1446 Histone H3 (Lys4) meth 100.0 1.4E-26 3E-31 190.7 30.3 274 23-342 13-301 (311)
83 KOG0282 mRNA splicing factor [ 100.0 2.1E-29 4.7E-34 217.3 13.1 207 111-345 206-463 (503)
84 KOG0973 Histone transcription 100.0 1.1E-27 2.5E-32 224.8 24.2 287 23-342 12-353 (942)
85 KOG0300 WD40 repeat-containing 100.0 9.2E-28 2E-32 197.6 20.5 284 37-344 126-428 (481)
86 KOG0294 WD40 repeat-containing 100.0 4.7E-27 1E-31 193.1 24.5 259 37-343 3-280 (362)
87 KOG0647 mRNA export protein (c 100.0 2.7E-27 6E-32 193.4 22.2 241 61-344 24-281 (347)
88 KOG0288 WD40 repeat protein Ti 100.0 6.7E-29 1.4E-33 210.4 13.1 247 54-344 165-417 (459)
89 KOG2445 Nuclear pore complex c 100.0 8.8E-27 1.9E-31 190.9 24.3 259 60-344 9-318 (361)
90 PTZ00421 coronin; Provisional 100.0 2.8E-26 6.1E-31 211.6 29.6 239 83-344 35-290 (493)
91 KOG0289 mRNA splicing factor [ 100.0 7.5E-27 1.6E-31 199.2 23.2 277 25-343 220-505 (506)
92 PTZ00420 coronin; Provisional 100.0 2.3E-26 5E-31 213.3 28.1 228 85-343 49-292 (568)
93 KOG0301 Phospholipase A2-activ 100.0 5.5E-27 1.2E-31 210.4 22.0 240 56-344 6-249 (745)
94 KOG0305 Anaphase promoting com 100.0 9.4E-27 2E-31 208.1 23.4 240 23-305 216-463 (484)
95 KOG0308 Conserved WD40 repeat- 100.0 2.5E-27 5.4E-32 211.2 18.3 231 81-342 38-283 (735)
96 KOG0310 Conserved WD40 repeat- 100.0 2E-26 4.3E-31 199.4 22.7 237 64-343 26-267 (487)
97 KOG0299 U3 snoRNP-associated p 100.0 6.3E-26 1.4E-30 194.9 24.9 274 20-338 138-450 (479)
98 KOG1408 WD40 repeat protein [F 100.0 1.6E-26 3.5E-31 208.0 22.2 280 22-344 367-713 (1080)
99 KOG0321 WD40 repeat-containing 99.9 5.2E-26 1.1E-30 202.4 22.6 305 23-343 46-390 (720)
100 KOG1407 WD40 repeat protein [F 99.9 2.9E-25 6.3E-30 178.2 23.8 282 18-344 14-311 (313)
101 KOG1407 WD40 repeat protein [F 99.9 1.1E-25 2.5E-30 180.5 21.0 244 58-342 14-259 (313)
102 KOG1332 Vesicle coat complex C 99.9 6.4E-26 1.4E-30 180.3 18.8 253 19-303 6-286 (299)
103 KOG0639 Transducin-like enhanc 99.9 3.2E-26 7E-31 198.7 18.6 280 20-343 415-703 (705)
104 KOG0299 U3 snoRNP-associated p 99.9 1.9E-25 4.1E-30 192.0 22.5 251 58-344 136-410 (479)
105 KOG1446 Histone H3 (Lys4) meth 99.9 1.8E-24 4E-29 178.2 27.3 246 58-344 8-262 (311)
106 KOG0289 mRNA splicing factor [ 99.9 4.3E-25 9.3E-30 188.5 24.2 235 65-342 220-460 (506)
107 KOG0275 Conserved WD40 repeat- 99.9 8.6E-27 1.9E-31 192.4 13.2 248 10-301 249-507 (508)
108 KOG0643 Translation initiation 99.9 3.1E-25 6.7E-30 178.6 21.3 207 114-346 5-222 (327)
109 KOG0268 Sof1-like rRNA process 99.9 1.3E-26 2.9E-31 193.6 13.6 242 55-344 57-302 (433)
110 KOG0641 WD40 repeat protein [G 99.9 4.6E-24 1E-28 168.1 26.7 255 56-343 25-302 (350)
111 KOG0640 mRNA cleavage stimulat 99.9 6.2E-26 1.3E-30 186.2 16.6 221 114-343 107-334 (430)
112 KOG0269 WD40 repeat-containing 99.9 1.6E-25 3.5E-30 203.3 19.8 265 37-339 53-335 (839)
113 KOG0269 WD40 repeat-containing 99.9 6.9E-26 1.5E-30 205.6 17.1 234 34-305 99-342 (839)
114 KOG0302 Ribosome Assembly prot 99.9 8.2E-25 1.8E-29 183.9 21.5 261 60-346 147-440 (440)
115 KOG4283 Transcription-coupled 99.9 4.7E-25 1E-29 179.9 18.6 213 115-344 39-276 (397)
116 KOG0270 WD40 repeat-containing 99.9 1.8E-24 3.9E-29 185.3 22.8 249 68-344 177-449 (463)
117 KOG1036 Mitotic spindle checkp 99.9 7.2E-24 1.6E-28 174.0 23.4 236 63-344 12-262 (323)
118 KOG1063 RNA polymerase II elon 99.9 1.3E-23 2.7E-28 188.9 26.2 319 18-344 48-437 (764)
119 KOG0646 WD40 repeat protein [G 99.9 3E-24 6.6E-29 185.0 20.2 257 36-323 51-327 (476)
120 KOG0973 Histone transcription 99.9 5.7E-24 1.2E-28 200.1 23.2 267 62-344 11-312 (942)
121 KOG1063 RNA polymerase II elon 99.9 1.6E-23 3.5E-28 188.2 24.6 292 20-342 187-600 (764)
122 KOG0772 Uncharacterized conser 99.9 5.3E-24 1.2E-28 185.5 20.1 270 52-344 155-445 (641)
123 KOG1007 WD repeat protein TSSC 99.9 1.4E-23 3.1E-28 170.8 21.2 275 43-344 38-361 (370)
124 KOG2096 WD40 repeat protein [G 99.9 9.2E-23 2E-27 168.2 24.8 288 20-342 82-400 (420)
125 TIGR03866 PQQ_ABC_repeats PQQ- 99.9 7.4E-22 1.6E-26 173.6 32.4 265 36-344 2-279 (300)
126 KOG0267 Microtubule severing p 99.9 2.8E-25 6.1E-30 200.3 10.6 250 37-334 6-258 (825)
127 KOG1274 WD40 repeat protein [G 99.9 6.5E-23 1.4E-27 189.7 26.2 255 22-325 11-280 (933)
128 KOG0321 WD40 repeat-containing 99.9 3.1E-23 6.7E-28 184.9 22.8 305 14-344 90-445 (720)
129 KOG1539 WD repeat protein [Gen 99.9 1E-22 2.2E-27 186.6 26.0 291 22-344 241-648 (910)
130 KOG2445 Nuclear pore complex c 99.9 2.3E-22 5E-27 165.1 25.2 286 19-324 8-341 (361)
131 KOG1445 Tumor-specific antigen 99.9 1.7E-23 3.8E-28 186.4 19.2 103 241-343 642-749 (1012)
132 KOG0270 WD40 repeat-containing 99.9 4.3E-23 9.4E-28 176.9 20.8 237 35-309 192-455 (463)
133 KOG0267 Microtubule severing p 99.9 5.4E-25 1.2E-29 198.5 9.4 233 18-293 22-258 (825)
134 KOG0650 WD40 repeat nucleolar 99.9 3E-22 6.4E-27 177.5 23.5 298 11-342 384-733 (733)
135 KOG0642 Cell-cycle nuclear pro 99.9 3.5E-23 7.6E-28 182.3 16.0 260 59-343 289-560 (577)
136 KOG0307 Vesicle coat complex C 99.9 2.3E-23 5.1E-28 196.9 15.6 252 65-344 65-327 (1049)
137 KOG0302 Ribosome Assembly prot 99.9 1.3E-22 2.9E-27 170.6 18.1 218 115-343 147-377 (440)
138 KOG2048 WD40 repeat protein [G 99.9 9.1E-21 2E-25 170.4 28.8 275 24-342 25-317 (691)
139 KOG4283 Transcription-coupled 99.9 4.6E-21 1E-25 156.7 24.3 283 20-343 39-364 (397)
140 KOG2055 WD40 repeat protein [G 99.9 3.9E-21 8.5E-26 165.6 24.9 288 18-343 207-511 (514)
141 KOG2106 Uncharacterized conser 99.9 3.8E-20 8.2E-25 161.3 29.0 285 24-344 246-626 (626)
142 KOG1539 WD repeat protein [Gen 99.9 8.7E-21 1.9E-25 174.0 26.3 308 20-345 198-607 (910)
143 KOG1034 Transcriptional repres 99.9 8.5E-22 1.8E-26 163.1 15.9 255 36-303 106-383 (385)
144 KOG4328 WD40 protein [Function 99.9 8.9E-21 1.9E-25 163.3 22.0 289 19-343 181-494 (498)
145 KOG2106 Uncharacterized conser 99.9 5E-19 1.1E-23 154.4 31.1 294 23-341 199-518 (626)
146 KOG0646 WD40 repeat protein [G 99.9 3.4E-20 7.3E-25 160.2 23.3 266 38-347 10-310 (476)
147 TIGR03866 PQQ_ABC_repeats PQQ- 99.9 3.7E-19 8.1E-24 156.3 30.7 253 27-325 33-300 (300)
148 KOG2096 WD40 repeat protein [G 99.9 3.5E-20 7.5E-25 153.1 22.2 259 57-342 79-358 (420)
149 KOG4378 Nuclear protein COP1 [ 99.9 3.6E-20 7.9E-25 161.1 22.5 253 27-325 37-303 (673)
150 KOG4328 WD40 protein [Function 99.9 4.2E-20 9.2E-25 159.2 22.4 254 59-344 181-450 (498)
151 KOG1408 WD40 repeat protein [F 99.9 1.6E-19 3.5E-24 163.3 25.9 284 32-345 332-672 (1080)
152 KOG4378 Nuclear protein COP1 [ 99.9 3.1E-20 6.7E-25 161.5 19.5 261 45-344 12-280 (673)
153 COG2319 FOG: WD40 repeat [Gene 99.9 1.4E-17 3E-22 152.0 35.8 287 19-345 60-360 (466)
154 KOG0639 Transducin-like enhanc 99.8 6E-20 1.3E-24 160.0 17.1 254 2-302 443-703 (705)
155 KOG0642 Cell-cycle nuclear pro 99.8 5.4E-20 1.2E-24 162.4 16.6 263 20-315 290-573 (577)
156 KOG1273 WD40 repeat protein [G 99.8 5.2E-19 1.1E-23 146.0 21.2 282 27-346 26-324 (405)
157 KOG0303 Actin-binding protein 99.8 2.8E-19 6.1E-24 151.6 19.5 215 59-306 76-297 (472)
158 KOG1274 WD40 repeat protein [G 99.8 1.1E-18 2.4E-23 162.0 24.4 242 62-344 11-262 (933)
159 KOG1009 Chromatin assembly com 99.8 5.6E-19 1.2E-23 150.3 20.3 284 24-340 13-368 (434)
160 KOG1034 Transcriptional repres 99.8 5.5E-19 1.2E-23 146.6 19.7 290 20-345 34-384 (385)
161 KOG0644 Uncharacterized conser 99.8 2.5E-20 5.4E-25 171.0 11.7 276 20-343 186-467 (1113)
162 KOG0290 Conserved WD40 repeat- 99.8 2.4E-18 5.2E-23 140.7 21.7 280 27-333 47-355 (364)
163 KOG0303 Actin-binding protein 99.8 1E-18 2.2E-23 148.3 19.5 203 17-258 74-295 (472)
164 KOG0650 WD40 repeat nucleolar 99.8 1E-18 2.2E-23 155.3 20.2 269 55-344 391-680 (733)
165 KOG1188 WD40 repeat protein [G 99.8 5E-19 1.1E-23 147.5 16.9 192 82-305 42-244 (376)
166 KOG1007 WD repeat protein TSSC 99.8 1.2E-18 2.6E-23 142.3 18.4 234 87-346 37-291 (370)
167 KOG0322 G-protein beta subunit 99.8 1.1E-18 2.4E-23 140.8 16.4 270 57-343 7-322 (323)
168 KOG2048 WD40 repeat protein [G 99.8 2.5E-17 5.3E-22 148.5 26.7 239 63-343 24-274 (691)
169 KOG0307 Vesicle coat complex C 99.8 5.7E-19 1.2E-23 167.5 16.8 232 36-305 81-329 (1049)
170 KOG1334 WD40 repeat protein [G 99.8 8.3E-19 1.8E-23 152.4 15.1 294 19-343 137-465 (559)
171 KOG2919 Guanine nucleotide-bin 99.8 3.7E-17 7.9E-22 135.6 23.0 280 27-334 52-360 (406)
172 COG2319 FOG: WD40 repeat [Gene 99.8 7.2E-16 1.6E-20 140.7 34.0 281 20-344 151-442 (466)
173 KOG0290 Conserved WD40 repeat- 99.8 4E-18 8.7E-23 139.4 15.8 254 66-346 46-320 (364)
174 KOG0649 WD40 repeat protein [G 99.8 2E-16 4.4E-21 126.5 24.9 267 31-341 17-313 (325)
175 KOG0644 Uncharacterized conser 99.8 6.9E-19 1.5E-23 161.7 9.6 234 59-343 185-425 (1113)
176 KOG1517 Guanine nucleotide bin 99.8 8.2E-17 1.8E-21 151.6 23.0 283 28-344 1068-1381(1387)
177 KOG1587 Cytoplasmic dynein int 99.8 2.8E-16 6.1E-21 144.9 25.2 277 45-344 222-516 (555)
178 KOG1188 WD40 repeat protein [G 99.8 4.3E-17 9.4E-22 136.1 17.1 243 36-303 41-346 (376)
179 KOG1517 Guanine nucleotide bin 99.8 3E-16 6.4E-21 147.9 23.3 253 67-344 1067-1333(1387)
180 KOG4227 WD40 repeat protein [G 99.8 7.7E-17 1.7E-21 136.9 17.5 254 54-344 46-322 (609)
181 KOG2055 WD40 repeat protein [G 99.8 2.7E-16 5.9E-21 136.1 21.0 243 64-345 213-468 (514)
182 KOG4227 WD40 repeat protein [G 99.8 3.5E-16 7.5E-21 133.0 21.0 283 19-343 51-386 (609)
183 KOG2919 Guanine nucleotide-bin 99.7 4.4E-16 9.6E-21 129.3 20.2 243 67-343 52-326 (406)
184 KOG1273 WD40 repeat protein [G 99.7 3.6E-16 7.8E-21 129.4 18.5 193 122-344 26-226 (405)
185 KOG1587 Cytoplasmic dynein int 99.7 1.2E-15 2.7E-20 140.8 23.8 274 6-304 223-517 (555)
186 PRK11028 6-phosphogluconolacto 99.7 1.8E-14 3.8E-19 128.8 29.6 271 38-343 5-303 (330)
187 KOG1310 WD40 repeat protein [G 99.7 2.1E-16 4.6E-21 139.5 16.0 261 17-310 43-310 (758)
188 KOG1524 WD40 repeat-containing 99.7 3E-15 6.5E-20 132.0 20.8 263 22-340 12-282 (737)
189 PRK01742 tolB translocation pr 99.7 1.9E-15 4.2E-20 139.3 20.7 234 44-325 183-425 (429)
190 KOG1538 Uncharacterized conser 99.7 3.2E-15 6.9E-20 135.0 20.1 268 26-344 14-293 (1081)
191 KOG1963 WD40 repeat protein [G 99.7 3.7E-14 7.9E-19 131.9 26.0 296 20-344 201-538 (792)
192 KOG1445 Tumor-specific antigen 99.7 2E-15 4.2E-20 135.6 16.4 236 41-307 599-848 (1012)
193 KOG0649 WD40 repeat protein [G 99.7 1.5E-13 3.2E-18 110.3 23.1 201 21-257 59-274 (325)
194 KOG1240 Protein kinase contain 99.6 7.2E-14 1.6E-18 134.0 24.4 292 21-342 1045-1431(1431)
195 KOG1523 Actin-related protein 99.6 8.8E-14 1.9E-18 115.6 21.7 244 59-336 5-270 (361)
196 KOG0322 G-protein beta subunit 99.6 5.9E-15 1.3E-19 119.4 14.1 258 20-302 10-322 (323)
197 KOG1240 Protein kinase contain 99.6 1.2E-13 2.5E-18 132.6 24.7 268 50-344 1034-1334(1431)
198 KOG1538 Uncharacterized conser 99.6 1.4E-14 3E-19 130.9 17.0 236 19-303 48-293 (1081)
199 KOG0771 Prolactin regulatory e 99.6 2.6E-14 5.5E-19 122.8 15.4 193 123-342 148-352 (398)
200 KOG1524 WD40 repeat-containing 99.6 5.7E-14 1.2E-18 124.1 16.5 170 131-334 75-246 (737)
201 KOG1009 Chromatin assembly com 99.6 1.4E-14 3.1E-19 123.7 11.5 179 119-343 13-194 (434)
202 KOG0280 Uncharacterized conser 99.6 8.8E-13 1.9E-17 108.6 21.2 248 65-341 70-330 (339)
203 PRK01742 tolB translocation pr 99.6 2.7E-13 5.9E-18 125.1 19.9 210 89-344 183-401 (429)
204 KOG1334 WD40 repeat protein [G 99.6 1.3E-13 2.9E-18 120.4 15.2 252 58-344 136-424 (559)
205 PRK03629 tolB translocation pr 99.5 9.8E-12 2.1E-16 114.6 27.5 232 46-325 180-427 (429)
206 PRK11028 6-phosphogluconolacto 99.5 2.5E-11 5.3E-16 108.5 28.9 249 25-303 35-304 (330)
207 KOG0771 Prolactin regulatory e 99.5 5.2E-13 1.1E-17 114.9 14.9 196 68-304 148-355 (398)
208 PRK02889 tolB translocation pr 99.5 1.1E-11 2.5E-16 114.3 24.5 235 45-325 176-424 (427)
209 PRK04922 tolB translocation pr 99.5 1.1E-11 2.5E-16 114.6 23.7 235 45-325 184-432 (433)
210 KOG1310 WD40 repeat protein [G 99.5 1.5E-13 3.3E-18 121.7 10.2 168 113-304 44-232 (758)
211 KOG1963 WD40 repeat protein [G 99.5 6.2E-11 1.3E-15 110.7 27.0 289 30-344 22-322 (792)
212 PRK05137 tolB translocation pr 99.5 7.5E-11 1.6E-15 109.3 27.0 232 46-325 183-432 (435)
213 KOG1272 WD40-repeat-containing 99.4 4.9E-13 1.1E-17 116.3 9.1 228 68-344 133-362 (545)
214 KOG1523 Actin-related protein 99.4 2.3E-11 4.9E-16 101.5 17.7 201 118-342 9-234 (361)
215 KOG1272 WD40-repeat-containing 99.4 1.3E-12 2.8E-17 113.7 10.7 215 27-284 173-391 (545)
216 KOG1354 Serine/threonine prote 99.4 4.3E-11 9.3E-16 100.8 19.3 276 22-343 23-358 (433)
217 KOG1409 Uncharacterized conser 99.4 3.5E-11 7.6E-16 101.3 18.3 227 20-257 20-270 (404)
218 KOG2110 Uncharacterized conser 99.4 5.5E-10 1.2E-14 95.0 23.9 221 79-343 16-247 (391)
219 KOG2111 Uncharacterized conser 99.4 3.9E-10 8.4E-15 94.2 21.4 153 186-343 94-255 (346)
220 KOG3881 Uncharacterized conser 99.4 2.5E-10 5.5E-15 97.7 20.6 249 64-344 55-320 (412)
221 KOG2139 WD40 repeat protein [G 99.4 1E-09 2.2E-14 93.2 23.7 235 37-304 112-384 (445)
222 KOG4497 Uncharacterized conser 99.3 2E-10 4.4E-15 96.3 18.9 259 37-342 63-389 (447)
223 KOG2321 WD40 repeat protein [G 99.3 5.1E-10 1.1E-14 100.3 22.5 272 22-341 49-340 (703)
224 KOG1409 Uncharacterized conser 99.3 9.8E-11 2.1E-15 98.6 17.0 251 56-344 16-270 (404)
225 KOG0974 WD-repeat protein WDR6 99.3 1.8E-10 3.9E-15 109.5 20.5 144 196-344 98-246 (967)
226 KOG0974 WD-repeat protein WDR6 99.3 1.3E-10 2.8E-15 110.5 18.9 197 24-257 87-288 (967)
227 KOG2110 Uncharacterized conser 99.3 5.3E-10 1.2E-14 95.1 20.1 195 120-345 6-205 (391)
228 PRK03629 tolB translocation pr 99.3 8.6E-10 1.9E-14 101.8 23.1 210 91-342 180-404 (429)
229 KOG3881 Uncharacterized conser 99.3 8.7E-11 1.9E-15 100.4 14.0 175 25-234 149-339 (412)
230 PRK04922 tolB translocation pr 99.3 1.4E-09 3E-14 100.7 21.9 218 21-282 200-432 (433)
231 KOG2394 WD40 protein DMR-N9 [G 99.3 4E-10 8.6E-15 100.2 16.8 191 82-324 187-383 (636)
232 PRK02889 tolB translocation pr 99.3 1.6E-09 3.5E-14 100.1 21.6 222 21-282 192-424 (427)
233 KOG2111 Uncharacterized conser 99.3 3.5E-08 7.7E-13 82.7 27.1 176 45-258 75-257 (346)
234 KOG4190 Uncharacterized conser 99.2 1.3E-11 2.7E-16 110.0 7.0 207 112-341 728-945 (1034)
235 PRK04792 tolB translocation pr 99.2 6E-09 1.3E-13 96.7 24.9 233 46-325 199-446 (448)
236 PRK00178 tolB translocation pr 99.2 5E-09 1.1E-13 97.1 24.4 233 46-325 180-427 (430)
237 TIGR02800 propeller_TolB tol-p 99.2 7.8E-09 1.7E-13 95.5 25.3 230 46-323 171-416 (417)
238 KOG2139 WD40 repeat protein [G 99.2 4.8E-09 1E-13 89.2 21.4 201 66-297 100-305 (445)
239 PRK05137 tolB translocation pr 99.2 3.4E-09 7.4E-14 98.3 22.4 218 20-282 197-432 (435)
240 PF02239 Cytochrom_D1: Cytochr 99.2 4.7E-08 1E-12 88.0 28.1 275 37-345 8-348 (369)
241 PF08662 eIF2A: Eukaryotic tra 99.2 2.4E-09 5.2E-14 87.6 17.9 127 208-343 38-178 (194)
242 PF08662 eIF2A: Eukaryotic tra 99.1 2.2E-09 4.8E-14 87.8 15.1 129 4-149 39-179 (194)
243 PF10282 Lactonase: Lactonase, 99.1 6.9E-07 1.5E-11 80.2 32.4 285 38-343 2-321 (345)
244 PF02239 Cytochrom_D1: Cytochr 99.1 3.5E-08 7.5E-13 88.8 23.6 193 82-311 8-210 (369)
245 KOG0309 Conserved WD40 repeat- 99.1 3.5E-10 7.7E-15 104.0 10.2 240 65-344 25-339 (1081)
246 KOG4190 Uncharacterized conser 99.1 8.8E-10 1.9E-14 98.5 12.2 283 20-340 731-1032(1034)
247 KOG2321 WD40 repeat protein [G 99.1 1.3E-08 2.8E-13 91.4 19.5 236 62-343 49-301 (703)
248 KOG4547 WD40 repeat-containing 99.1 3.4E-09 7.4E-14 95.4 15.8 198 128-343 2-219 (541)
249 KOG1064 RAVE (regulator of V-A 99.1 1.2E-09 2.6E-14 109.2 13.9 246 37-337 2182-2439(2439)
250 KOG2394 WD40 protein DMR-N9 [G 99.1 1E-09 2.3E-14 97.6 12.2 147 196-344 184-362 (636)
251 KOG0280 Uncharacterized conser 99.1 2.3E-08 5E-13 82.9 19.1 132 192-325 127-263 (339)
252 COG5170 CDC55 Serine/threonine 99.1 6.2E-09 1.3E-13 86.9 15.1 282 21-343 23-366 (460)
253 TIGR02800 propeller_TolB tol-p 99.1 4.8E-08 1E-12 90.3 22.7 197 20-256 185-396 (417)
254 KOG0309 Conserved WD40 repeat- 99.1 8.9E-10 1.9E-14 101.4 10.4 234 35-304 82-340 (1081)
255 PRK01029 tolB translocation pr 99.0 2.6E-07 5.7E-12 85.2 25.9 242 46-325 166-424 (428)
256 KOG4714 Nucleoporin [Nuclear s 99.0 6E-09 1.3E-13 84.9 12.9 232 82-342 49-316 (319)
257 PLN02919 haloacid dehalogenase 99.0 1.4E-06 3.1E-11 88.5 31.7 254 34-307 579-892 (1057)
258 KOG1064 RAVE (regulator of V-A 99.0 6.2E-09 1.3E-13 104.3 12.0 192 115-346 2204-2400(2439)
259 KOG3914 WD repeat protein WDR4 98.9 3.6E-08 7.8E-13 85.1 14.9 153 36-224 75-232 (390)
260 KOG2041 WD40 repeat protein [G 98.9 1.9E-07 4.2E-12 86.2 20.2 281 16-340 6-333 (1189)
261 TIGR03300 assembly_YfgL outer 98.9 1.6E-06 3.4E-11 79.0 26.5 270 35-342 105-377 (377)
262 KOG4547 WD40 repeat-containing 98.9 6.3E-07 1.4E-11 81.1 22.9 190 35-258 5-221 (541)
263 PRK00178 tolB translocation pr 98.9 3.9E-07 8.4E-12 84.5 22.7 217 22-282 196-427 (430)
264 PRK04792 tolB translocation pr 98.9 4.9E-07 1.1E-11 84.0 22.3 216 23-282 216-446 (448)
265 PF10282 Lactonase: Lactonase, 98.9 8.6E-06 1.9E-10 73.2 29.0 267 30-323 42-345 (345)
266 PF00400 WD40: WD domain, G-be 98.9 8.3E-09 1.8E-13 60.7 6.2 37 111-147 3-39 (39)
267 PRK01029 tolB translocation pr 98.8 1.8E-06 3.9E-11 79.7 22.2 197 117-342 182-401 (428)
268 KOG3914 WD repeat protein WDR4 98.8 1.7E-07 3.8E-12 80.9 13.4 144 196-344 73-223 (390)
269 KOG2315 Predicted translation 98.7 0.00011 2.3E-09 66.7 29.7 127 207-342 251-388 (566)
270 KOG4532 WD40-like repeat conta 98.7 4.4E-06 9.6E-11 68.8 19.2 208 82-325 86-312 (344)
271 PLN02919 haloacid dehalogenase 98.7 1.8E-05 3.9E-10 80.7 27.9 261 69-344 572-888 (1057)
272 KOG2041 WD40 repeat protein [G 98.7 1.3E-06 2.7E-11 81.0 16.9 240 65-335 15-279 (1189)
273 COG2706 3-carboxymuconate cycl 98.6 0.00016 3.4E-09 62.4 27.0 276 45-343 16-320 (346)
274 PF00400 WD40: WD domain, G-be 98.6 8.8E-08 1.9E-12 56.3 5.1 39 54-96 1-39 (39)
275 TIGR03300 assembly_YfgL outer 98.6 5.7E-05 1.2E-09 68.8 26.0 260 35-344 65-338 (377)
276 KOG2695 WD40 repeat protein [G 98.6 2E-07 4.4E-12 79.1 7.5 161 36-228 225-389 (425)
277 KOG2695 WD40 repeat protein [G 98.6 5.7E-07 1.2E-11 76.4 9.8 137 187-324 253-401 (425)
278 PF04762 IKI3: IKI3 family; I 98.5 0.00037 8.1E-09 70.1 31.2 276 37-339 37-374 (928)
279 TIGR02658 TTQ_MADH_Hv methylam 98.5 0.00057 1.2E-08 60.8 30.4 262 45-344 27-330 (352)
280 KOG1354 Serine/threonine prote 98.5 3.4E-06 7.4E-11 71.8 13.4 215 119-344 25-301 (433)
281 PF15492 Nbas_N: Neuroblastoma 98.5 5.1E-05 1.1E-09 63.4 19.4 191 122-346 46-261 (282)
282 KOG2314 Translation initiation 98.5 0.00011 2.4E-09 66.6 22.3 285 30-334 216-557 (698)
283 KOG0882 Cyclophilin-related pe 98.5 1E-06 2.2E-11 77.4 9.2 190 20-223 5-239 (558)
284 PRK04043 tolB translocation pr 98.5 0.00035 7.6E-09 64.3 26.3 230 46-322 168-418 (419)
285 KOG2315 Predicted translation 98.4 8.5E-05 1.8E-09 67.3 21.1 252 29-324 130-409 (566)
286 KOG2066 Vacuolar assembly/sort 98.4 1.7E-05 3.6E-10 74.7 16.6 184 23-257 38-233 (846)
287 COG5170 CDC55 Serine/threonine 98.4 1.1E-05 2.4E-10 67.9 12.9 214 119-344 26-309 (460)
288 KOG4532 WD40-like repeat conta 98.4 4.2E-05 9.1E-10 63.2 15.9 170 131-326 84-261 (344)
289 KOG2066 Vacuolar assembly/sort 98.4 1.7E-05 3.7E-10 74.7 15.0 183 119-342 39-231 (846)
290 PF07433 DUF1513: Protein of u 98.3 0.00074 1.6E-08 58.1 23.7 67 270-338 214-280 (305)
291 KOG1912 WD40 repeat protein [G 98.3 2.2E-05 4.7E-10 73.7 15.3 83 20-102 51-147 (1062)
292 PRK11138 outer membrane biogen 98.3 0.00084 1.8E-08 61.6 25.8 268 35-342 120-392 (394)
293 KOG2114 Vacuolar assembly/sort 98.3 0.00041 9E-09 66.2 23.5 219 26-278 27-262 (933)
294 KOG4714 Nucleoporin [Nuclear s 98.3 1.2E-06 2.6E-11 71.7 6.1 143 196-344 100-254 (319)
295 KOG1645 RING-finger-containing 98.3 4.9E-05 1.1E-09 66.2 15.7 82 111-218 185-269 (463)
296 KOG4497 Uncharacterized conser 98.3 7.4E-06 1.6E-10 69.4 10.3 132 195-331 18-150 (447)
297 COG4946 Uncharacterized protei 98.3 0.00029 6.2E-09 62.9 20.1 119 20-151 355-479 (668)
298 TIGR02658 TTQ_MADH_Hv methylam 98.2 0.0019 4.1E-08 57.5 24.8 111 196-311 205-338 (352)
299 KOG1832 HIV-1 Vpr-binding prot 98.2 8.9E-07 1.9E-11 83.8 4.1 195 58-309 1095-1297(1516)
300 PF04762 IKI3: IKI3 family; I 98.2 0.0022 4.7E-08 64.7 27.5 233 23-304 208-457 (928)
301 KOG1275 PAB-dependent poly(A) 98.2 6.3E-05 1.4E-09 72.0 15.5 194 34-302 146-341 (1118)
302 COG5354 Uncharacterized protei 98.2 0.00061 1.3E-08 61.3 20.7 259 27-305 74-397 (561)
303 KOG1912 WD40 repeat protein [G 98.2 0.00032 6.8E-09 66.2 19.3 236 67-343 18-303 (1062)
304 COG2706 3-carboxymuconate cycl 98.1 0.0045 9.7E-08 53.6 28.1 268 20-323 35-344 (346)
305 PF13360 PQQ_2: PQQ-like domai 98.1 0.0027 5.8E-08 53.7 22.4 215 44-307 2-234 (238)
306 PF08450 SGL: SMP-30/Gluconola 98.1 0.0054 1.2E-07 52.2 28.3 212 70-324 5-233 (246)
307 PF15492 Nbas_N: Neuroblastoma 98.0 0.0033 7.2E-08 52.8 20.3 192 28-223 47-267 (282)
308 PRK04043 tolB translocation pr 98.0 0.0023 5.1E-08 58.9 21.1 175 121-330 189-383 (419)
309 KOG2114 Vacuolar assembly/sort 98.0 0.0022 4.8E-08 61.4 20.7 210 82-322 37-263 (933)
310 KOG0882 Cyclophilin-related pe 98.0 0.00014 3E-09 64.3 12.0 203 117-344 7-231 (558)
311 COG4946 Uncharacterized protei 97.9 0.0026 5.6E-08 57.0 18.7 143 192-342 327-475 (668)
312 KOG1008 Uncharacterized conser 97.9 5.2E-06 1.1E-10 76.2 2.1 206 67-304 59-276 (783)
313 KOG1275 PAB-dependent poly(A) 97.9 0.00053 1.2E-08 65.9 14.4 141 195-342 185-340 (1118)
314 KOG1920 IkappaB kinase complex 97.8 0.01 2.2E-07 59.3 22.8 218 65-304 69-323 (1265)
315 KOG1832 HIV-1 Vpr-binding prot 97.8 2.6E-05 5.7E-10 74.3 5.0 184 108-330 1090-1282(1516)
316 smart00320 WD40 WD40 repeats. 97.8 8.2E-05 1.8E-09 42.2 5.3 37 111-147 4-40 (40)
317 PF08450 SGL: SMP-30/Gluconola 97.7 0.021 4.5E-07 48.6 26.8 213 34-292 11-245 (246)
318 PF13360 PQQ_2: PQQ-like domai 97.7 0.014 3E-07 49.2 20.0 195 34-258 35-231 (238)
319 PF11768 DUF3312: Protein of u 97.6 0.0028 6.1E-08 58.4 14.9 72 270-344 257-329 (545)
320 KOG1008 Uncharacterized conser 97.5 0.00012 2.6E-09 67.6 4.9 202 23-258 55-276 (783)
321 PF08596 Lgl_C: Lethal giant l 97.5 0.035 7.6E-07 50.6 19.9 225 121-346 3-292 (395)
322 KOG1645 RING-finger-containing 97.4 0.00053 1.1E-08 60.0 7.0 84 179-262 186-271 (463)
323 PF11768 DUF3312: Protein of u 97.4 0.00082 1.8E-08 61.8 8.3 74 117-217 257-331 (545)
324 KOG3617 WD40 and TPR repeat-co 97.3 0.0089 1.9E-07 57.5 14.7 119 15-149 5-131 (1416)
325 PRK11138 outer membrane biogen 97.3 0.13 2.7E-06 47.3 25.5 258 35-342 69-351 (394)
326 smart00320 WD40 WD40 repeats. 97.3 0.00056 1.2E-08 38.5 4.5 37 306-342 3-40 (40)
327 KOG2314 Translation initiation 97.3 0.092 2E-06 48.4 19.7 91 249-344 425-525 (698)
328 KOG3621 WD40 repeat-containing 97.3 0.036 7.7E-07 52.4 17.5 122 20-150 29-155 (726)
329 KOG1920 IkappaB kinase complex 97.2 0.14 3E-06 51.6 21.8 243 25-302 69-364 (1265)
330 PF14783 BBS2_Mid: Ciliary BBS 97.2 0.045 9.7E-07 39.7 13.6 91 198-298 16-109 (111)
331 PF14783 BBS2_Mid: Ciliary BBS 97.1 0.054 1.2E-06 39.3 14.4 69 67-148 2-70 (111)
332 KOG3621 WD40 repeat-containing 97.1 0.011 2.3E-07 55.7 12.3 134 195-331 43-186 (726)
333 COG5354 Uncharacterized protei 97.1 0.12 2.7E-06 47.0 18.3 247 48-342 15-304 (561)
334 PF08553 VID27: VID27 cytoplas 96.9 0.039 8.4E-07 54.2 14.7 133 204-342 501-645 (794)
335 PF08553 VID27: VID27 cytoplas 96.7 0.051 1.1E-06 53.4 14.2 98 198-302 543-646 (794)
336 PRK02888 nitrous-oxide reducta 96.6 0.3 6.6E-06 46.6 18.1 105 196-304 287-405 (635)
337 KOG4649 PQQ (pyrrolo-quinoline 96.5 0.39 8.5E-06 40.3 23.2 62 35-101 63-126 (354)
338 PF04053 Coatomer_WDAD: Coatom 96.5 0.18 3.9E-06 46.7 15.8 148 114-304 27-174 (443)
339 PRK02888 nitrous-oxide reducta 96.5 0.87 1.9E-05 43.6 21.3 94 248-343 295-403 (635)
340 KOG2444 WD40 repeat protein [G 96.2 0.016 3.4E-07 47.4 6.4 104 35-150 70-178 (238)
341 KOG4640 Anaphase-promoting com 96.1 0.037 7.9E-07 51.7 9.0 90 229-324 23-114 (665)
342 KOG2444 WD40 repeat protein [G 96.0 0.016 3.5E-07 47.3 5.6 142 200-345 33-178 (238)
343 KOG4441 Proteins containing BT 96.0 1.1 2.5E-05 43.1 19.0 226 34-304 284-547 (571)
344 KOG2395 Protein involved in va 95.9 0.18 3.9E-06 46.4 12.0 136 200-340 349-496 (644)
345 PHA02713 hypothetical protein; 95.7 2.1 4.5E-05 41.3 20.0 93 208-305 433-535 (557)
346 COG3490 Uncharacterized protei 95.7 1.1 2.5E-05 38.2 20.6 71 271-344 278-348 (366)
347 KOG4441 Proteins containing BT 95.7 2.2 4.7E-05 41.3 19.4 137 196-337 380-534 (571)
348 KOG4640 Anaphase-promoting com 95.7 0.064 1.4E-06 50.2 8.4 89 120-234 21-113 (665)
349 KOG2079 Vacuolar assembly/sort 95.5 0.052 1.1E-06 53.8 7.7 94 241-337 101-198 (1206)
350 PF12894 Apc4_WD40: Anaphase-p 95.4 0.049 1.1E-06 32.9 4.8 31 119-149 11-41 (47)
351 KOG3617 WD40 and TPR repeat-co 95.3 0.065 1.4E-06 51.9 7.5 92 247-344 39-131 (1416)
352 PHA02713 hypothetical protein; 95.3 1.7 3.8E-05 41.8 17.5 133 196-336 351-523 (557)
353 KOG2079 Vacuolar assembly/sort 95.3 0.073 1.6E-06 52.9 7.9 99 35-148 99-202 (1206)
354 COG0823 TolB Periplasmic compo 94.9 3.1 6.8E-05 38.5 20.2 84 54-148 182-267 (425)
355 PF04841 Vps16_N: Vps16, N-ter 94.9 3.1 6.8E-05 38.4 20.1 29 187-215 81-109 (410)
356 PF03178 CPSF_A: CPSF A subuni 94.9 2.6 5.7E-05 37.4 18.7 112 186-303 88-202 (321)
357 PF12894 Apc4_WD40: Anaphase-p 94.7 0.16 3.4E-06 30.7 5.4 32 273-306 12-43 (47)
358 PF03178 CPSF_A: CPSF A subuni 94.4 2.5 5.4E-05 37.5 15.1 130 207-344 62-202 (321)
359 PF10313 DUF2415: Uncharacteri 94.3 0.24 5.3E-06 29.1 5.4 32 274-305 2-35 (43)
360 COG0823 TolB Periplasmic compo 93.8 1.2 2.6E-05 41.2 12.0 121 208-333 219-344 (425)
361 PF00780 CNH: CNH domain; Int 93.5 4.4 9.6E-05 34.9 16.0 132 196-333 6-155 (275)
362 PF08596 Lgl_C: Lethal giant l 93.5 5.9 0.00013 36.3 18.3 77 22-98 84-173 (395)
363 PF00780 CNH: CNH domain; Int 93.5 4.5 9.8E-05 34.8 26.2 238 34-314 6-266 (275)
364 PF08728 CRT10: CRT10; InterP 92.9 10 0.00022 37.3 18.3 114 189-302 103-245 (717)
365 PF05694 SBP56: 56kDa selenium 92.5 8.5 0.00018 35.3 19.1 105 203-307 218-346 (461)
366 PF02897 Peptidase_S9_N: Proly 92.5 8.7 0.00019 35.4 17.7 110 195-305 133-262 (414)
367 PF06977 SdiA-regulated: SdiA- 92.4 6.2 0.00013 33.6 19.5 195 24-238 21-233 (248)
368 PF07433 DUF1513: Protein of u 92.0 7.8 0.00017 33.9 23.1 61 59-137 51-116 (305)
369 PF06977 SdiA-regulated: SdiA- 91.9 7.3 0.00016 33.2 23.0 200 58-285 15-234 (248)
370 PRK13616 lipoprotein LpqB; Pro 91.8 7.1 0.00015 37.9 14.5 69 272-342 447-523 (591)
371 KOG2395 Protein involved in va 91.7 2.5 5.3E-05 39.4 10.5 94 202-302 399-499 (644)
372 COG3391 Uncharacterized conser 91.6 11 0.00023 34.5 21.0 160 123-309 77-245 (381)
373 PRK13616 lipoprotein LpqB; Pro 90.8 17 0.00036 35.4 18.5 109 226-340 447-564 (591)
374 COG3391 Uncharacterized conser 90.8 13 0.00028 34.0 21.4 200 69-311 78-291 (381)
375 PHA03098 kelch-like protein; P 90.8 16 0.00035 35.0 17.4 104 196-305 389-513 (534)
376 COG3386 Gluconolactonase [Carb 90.6 8 0.00017 34.1 12.6 94 51-149 149-243 (307)
377 PF12234 Rav1p_C: RAVE protein 90.5 6.5 0.00014 38.1 12.6 107 37-148 42-155 (631)
378 KOG2247 WD40 repeat-containing 90.1 0.044 9.4E-07 49.9 -1.9 139 195-339 44-183 (615)
379 PF04841 Vps16_N: Vps16, N-ter 90.0 16 0.00034 33.8 26.1 49 46-99 62-110 (410)
380 KOG4649 PQQ (pyrrolo-quinoline 89.1 13 0.00028 31.6 14.6 63 196-258 62-124 (354)
381 PF00930 DPPIV_N: Dipeptidyl p 88.4 19 0.0004 32.5 22.3 142 186-329 183-342 (353)
382 PF10647 Gmad1: Lipoprotein Lp 87.4 17 0.00038 31.0 15.1 138 189-328 26-178 (253)
383 PF14655 RAB3GAP2_N: Rab3 GTPa 87.3 14 0.00031 34.0 12.1 38 114-151 302-339 (415)
384 TIGR02276 beta_rpt_yvtn 40-res 86.3 3 6.4E-05 23.9 5.0 31 282-312 1-31 (42)
385 PF12234 Rav1p_C: RAVE protein 86.0 14 0.0003 36.0 11.7 101 199-302 42-155 (631)
386 KOG4499 Ca2+-binding protein R 85.5 20 0.00044 30.0 11.5 95 68-194 161-261 (310)
387 PF07569 Hira: TUP1-like enhan 85.5 3.5 7.7E-05 34.3 6.8 67 82-149 24-95 (219)
388 PF15390 DUF4613: Domain of un 84.7 38 0.00083 32.4 13.5 115 187-304 57-187 (671)
389 PF11715 Nup160: Nucleoporin N 84.6 2.3 4.9E-05 41.0 6.1 36 275-310 217-255 (547)
390 PHA02790 Kelch-like protein; P 84.3 38 0.00082 32.1 17.4 58 196-258 362-424 (480)
391 PF10313 DUF2415: Uncharacteri 84.3 3.5 7.7E-05 24.2 4.4 31 228-258 2-34 (43)
392 cd00216 PQQ_DH Dehydrogenases 83.3 42 0.00091 31.8 26.1 26 287-312 408-433 (488)
393 TIGR02276 beta_rpt_yvtn 40-res 83.2 6.1 0.00013 22.6 5.4 31 196-226 2-33 (42)
394 PHA03098 kelch-like protein; P 82.9 46 0.00099 31.9 17.2 47 209-258 458-512 (534)
395 KOG1900 Nuclear pore complex, 82.8 30 0.00064 36.3 12.8 167 42-216 96-273 (1311)
396 KOG1897 Damage-specific DNA bi 82.2 63 0.0014 33.0 27.3 50 291-340 844-894 (1096)
397 PF14761 HPS3_N: Hermansky-Pud 80.0 33 0.00071 28.4 11.6 44 86-137 34-77 (215)
398 PF04053 Coatomer_WDAD: Coatom 79.5 55 0.0012 30.6 21.2 223 60-342 28-260 (443)
399 PF07676 PD40: WD40-like Beta 79.2 9.2 0.0002 21.5 5.9 29 272-300 8-38 (39)
400 PF15390 DUF4613: Domain of un 78.8 64 0.0014 31.0 14.4 148 186-342 19-184 (671)
401 PF12657 TFIIIC_delta: Transcr 78.7 15 0.00032 29.3 7.8 28 317-344 87-121 (173)
402 COG3204 Uncharacterized protei 78.7 44 0.00095 29.1 15.3 83 227-311 181-270 (316)
403 PF07569 Hira: TUP1-like enhan 77.2 15 0.00033 30.6 7.7 26 195-220 20-45 (219)
404 PHA02790 Kelch-like protein; P 76.7 69 0.0015 30.3 17.5 21 130-150 362-385 (480)
405 KOG3630 Nuclear pore complex, 76.4 7.9 0.00017 39.6 6.6 97 244-341 119-225 (1405)
406 KOG1897 Damage-specific DNA bi 76.4 96 0.0021 31.8 26.2 128 208-340 471-609 (1096)
407 PF08728 CRT10: CRT10; InterP 74.4 64 0.0014 32.0 11.9 120 21-148 99-245 (717)
408 COG5167 VID27 Protein involved 73.2 57 0.0012 30.8 10.6 125 202-331 485-621 (776)
409 KOG2377 Uncharacterized conser 72.5 83 0.0018 29.3 12.9 75 118-214 65-139 (657)
410 KOG3630 Nuclear pore complex, 71.5 30 0.00064 35.8 9.1 132 194-330 109-259 (1405)
411 KOG1916 Nuclear protein, conta 71.1 5.8 0.00013 39.5 4.2 116 20-148 128-264 (1283)
412 COG5276 Uncharacterized conser 70.8 72 0.0016 27.9 17.5 133 197-336 96-234 (370)
413 PF12657 TFIIIC_delta: Transcr 70.7 52 0.0011 26.1 9.1 31 274-304 87-122 (173)
414 KOG2377 Uncharacterized conser 69.8 80 0.0017 29.4 10.6 60 270-330 64-127 (657)
415 PF14727 PHTB1_N: PTHB1 N-term 68.5 1E+02 0.0022 28.6 14.6 146 196-343 36-203 (418)
416 PF10168 Nup88: Nuclear pore c 68.3 1.4E+02 0.0029 30.1 14.7 90 121-217 86-181 (717)
417 KOG4499 Ca2+-binding protein R 68.2 73 0.0016 26.9 11.3 39 286-324 224-262 (310)
418 COG3386 Gluconolactonase [Carb 68.2 86 0.0019 27.7 20.1 104 228-333 164-275 (307)
419 PF02897 Peptidase_S9_N: Proly 68.1 99 0.0022 28.4 24.8 179 90-303 150-357 (414)
420 PF10168 Nup88: Nuclear pore c 68.1 1.4E+02 0.003 30.0 21.0 36 117-152 144-182 (717)
421 PF14781 BBS2_N: Ciliary BBSom 66.5 55 0.0012 24.8 10.6 100 199-304 12-126 (136)
422 KOG1916 Nuclear protein, conta 66.1 10 0.00022 38.0 4.7 156 183-345 129-324 (1283)
423 COG3490 Uncharacterized protei 65.4 93 0.002 27.1 10.5 95 232-333 73-180 (366)
424 PF14761 HPS3_N: Hermansky-Pud 64.8 38 0.00083 28.0 7.1 44 246-292 35-78 (215)
425 smart00564 PQQ beta-propeller 62.8 17 0.00037 19.3 3.5 23 198-220 7-29 (33)
426 PF01436 NHL: NHL repeat; Int 62.4 21 0.00045 18.6 3.8 25 122-146 4-28 (28)
427 PF11715 Nup160: Nucleoporin N 62.0 11 0.00025 36.2 4.4 27 196-222 229-255 (547)
428 PF01731 Arylesterase: Arylest 61.8 51 0.0011 22.8 6.6 32 273-304 54-85 (86)
429 cd00216 PQQ_DH Dehydrogenases 61.5 1.5E+02 0.0032 28.1 23.8 63 35-102 61-132 (488)
430 PF00930 DPPIV_N: Dipeptidyl p 61.5 1.2E+02 0.0027 27.2 21.8 236 44-323 22-287 (353)
431 COG4590 ABC-type uncharacteriz 60.9 74 0.0016 29.6 8.8 171 117-312 218-395 (733)
432 KOG3522 Predicted guanine nucl 60.8 59 0.0013 32.5 8.7 150 33-217 545-699 (925)
433 PF05694 SBP56: 56kDa selenium 59.9 1E+02 0.0022 28.6 9.6 110 42-152 219-345 (461)
434 TIGR03606 non_repeat_PQQ dehyd 59.6 1.6E+02 0.0034 27.8 11.9 52 25-76 30-90 (454)
435 PF07995 GSDH: Glucose / Sorbo 58.6 1.4E+02 0.0029 26.7 24.2 113 27-142 4-136 (331)
436 PF14870 PSII_BNR: Photosynthe 57.0 1.4E+02 0.003 26.4 16.6 106 25-140 145-253 (302)
437 PF14781 BBS2_N: Ciliary BBSom 57.0 85 0.0018 23.9 11.9 111 126-256 5-124 (136)
438 PRK10115 protease 2; Provision 56.3 2.2E+02 0.0048 28.5 22.0 30 122-151 129-163 (686)
439 KOG2280 Vacuolar assembly/sort 55.5 2.3E+02 0.0049 28.4 16.0 28 188-215 85-112 (829)
440 PF01011 PQQ: PQQ enzyme repea 54.1 26 0.00057 19.6 3.4 25 199-223 2-26 (38)
441 KOG1983 Tomosyn and related SN 53.8 2.9E+02 0.0063 29.1 13.5 29 26-54 37-66 (993)
442 COG3204 Uncharacterized protei 53.1 1.6E+02 0.0034 25.8 18.0 171 60-257 81-263 (316)
443 PF05096 Glu_cyclase_2: Glutam 52.6 1.5E+02 0.0033 25.5 19.2 181 122-332 47-249 (264)
444 PF06433 Me-amine-dh_H: Methyl 51.9 1.8E+02 0.0039 26.1 18.3 112 197-312 195-329 (342)
445 PF13570 PQQ_3: PQQ-like domai 49.5 32 0.00068 19.5 3.3 21 196-216 20-40 (40)
446 TIGR03075 PQQ_enz_alc_DH PQQ-d 49.1 2.5E+02 0.0055 27.0 13.5 146 76-246 311-523 (527)
447 COG5167 VID27 Protein involved 48.8 2.5E+02 0.0054 26.8 13.1 59 240-303 574-632 (776)
448 PF14870 PSII_BNR: Photosynthe 47.6 2E+02 0.0043 25.4 18.6 79 55-147 135-213 (302)
449 PF10647 Gmad1: Lipoprotein Lp 46.5 1.8E+02 0.004 24.7 20.5 76 228-303 113-197 (253)
450 PF10214 Rrn6: RNA polymerase 46.4 3.1E+02 0.0068 27.9 11.7 98 226-325 145-256 (765)
451 PLN00033 photosystem II stabil 45.9 2.5E+02 0.0053 26.0 17.8 67 274-343 329-398 (398)
452 KOG2280 Vacuolar assembly/sort 45.4 3.3E+02 0.0072 27.3 14.8 51 45-100 64-114 (829)
453 PF12341 DUF3639: Protein of u 44.7 47 0.001 17.3 3.6 24 228-254 3-26 (27)
454 KOG2247 WD40 repeat-containing 43.9 3.8 8.2E-05 37.9 -1.9 140 123-296 38-181 (615)
455 PF08801 Nucleoporin_N: Nup133 43.3 2.7E+02 0.0059 25.7 10.2 157 44-214 45-218 (422)
456 KOG3522 Predicted guanine nucl 43.2 1.6E+02 0.0034 29.8 8.5 133 196-335 546-689 (925)
457 PF10395 Utp8: Utp8 family; I 40.1 3.9E+02 0.0084 26.6 15.0 63 192-257 238-305 (670)
458 TIGR02608 delta_60_rpt delta-6 38.0 94 0.002 19.4 4.2 19 121-139 2-20 (55)
459 PF06433 Me-amine-dh_H: Methyl 36.1 3.2E+02 0.007 24.5 19.4 52 208-259 270-322 (342)
460 TIGR03118 PEPCTERM_chp_1 conse 35.1 3.2E+02 0.007 24.2 19.7 212 122-343 25-278 (336)
461 PF09826 Beta_propel: Beta pro 34.7 2.2E+02 0.0048 27.3 8.2 20 195-215 20-39 (521)
462 PF14727 PHTB1_N: PTHB1 N-term 34.4 3.9E+02 0.0084 24.9 29.0 114 36-150 38-164 (418)
463 KOG1900 Nuclear pore complex, 34.1 6.3E+02 0.014 27.3 11.5 32 228-260 244-275 (1311)
464 KOG1896 mRNA cleavage and poly 33.9 6.2E+02 0.013 27.1 12.8 113 187-304 1098-1214(1366)
465 PLN00033 photosystem II stabil 33.6 3.9E+02 0.0084 24.7 16.6 102 34-146 249-353 (398)
466 TIGR02604 Piru_Ver_Nterm putat 31.4 4E+02 0.0086 24.1 14.6 16 122-137 16-31 (367)
467 PF14339 DUF4394: Domain of un 30.0 3.4E+02 0.0074 22.9 11.1 84 254-339 6-99 (236)
468 KOG4460 Nuclear pore complex, 29.9 5.1E+02 0.011 24.9 11.5 32 274-305 167-200 (741)
469 KOG3611 Semaphorins [Signal tr 29.9 6E+02 0.013 25.7 10.7 79 64-145 407-489 (737)
470 smart00036 CNH Domain found in 29.4 3.9E+02 0.0085 23.4 12.2 106 198-304 14-132 (302)
471 PF02333 Phytase: Phytase; In 28.4 4.7E+02 0.01 24.0 23.4 198 36-258 69-291 (381)
472 PF14655 RAB3GAP2_N: Rab3 GTPa 27.6 5.1E+02 0.011 24.1 22.0 46 268-314 303-348 (415)
473 KOG4460 Nuclear pore complex, 26.2 6E+02 0.013 24.5 10.3 26 121-146 105-130 (741)
474 PF07995 GSDH: Glucose / Sorbo 25.7 4.8E+02 0.01 23.2 9.2 75 65-144 253-330 (331)
475 TIGR03074 PQQ_membr_DH membran 25.0 7.5E+02 0.016 25.2 12.1 24 197-220 194-217 (764)
476 PF14779 BBS1: Ciliary BBSome 24.1 3.2E+02 0.007 23.4 6.5 56 199-254 197-255 (257)
477 TIGR03548 mutarot_permut cycli 23.0 5.2E+02 0.011 22.7 10.7 51 207-258 139-195 (323)
478 PRK05560 DNA gyrase subunit A; 22.5 8.6E+02 0.019 25.0 25.4 186 122-331 593-797 (805)
479 PF14583 Pectate_lyase22: Olig 22.2 6.2E+02 0.013 23.3 17.5 28 276-303 354-381 (386)
480 PF05096 Glu_cyclase_2: Glutam 21.4 5.4E+02 0.012 22.2 16.9 114 187-310 45-164 (264)
481 PF06739 SBBP: Beta-propeller 20.7 1.8E+02 0.0038 16.4 3.3 22 120-141 13-34 (38)
No 1
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=100.00 E-value=1.7e-58 Score=385.54 Aligned_cols=337 Identities=41% Similarity=0.743 Sum_probs=289.8
Q ss_pred CceEEEEEEeccCCCCcCCCCCcCCceeeccCCCCCEEEEEecCCeEEEEcCCCeEEEEeeccCCceEEEEEeecCCCce
Q 036314 1 EKVLEIEYIKAVAPQKEEEPSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKY 80 (347)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~sg~~d~~i~iw~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~ 80 (347)
|.+|||+|+....|+++....-|++||.++... ++.|+||++||++|+|+..|++.+++.||.++|.++++.-.+. ..
T Consensus 82 E~~leIEYv~~~~aP~pl~~~~hdDWVSsv~~~-~~~IltgsYDg~~riWd~~Gk~~~~~~Ght~~ik~v~~v~~n~-~~ 159 (423)
T KOG0313|consen 82 EEILEIEYVEAITAPKPLQCFLHDDWVSSVKGA-SKWILTGSYDGTSRIWDLKGKSIKTIVGHTGPIKSVAWVIKNS-SS 159 (423)
T ss_pred hheeEEEEEEecCCCCccccccchhhhhhhccc-CceEEEeecCCeeEEEecCCceEEEEecCCcceeeeEEEecCC-cc
Confidence 789999999999999999999999999999987 7899999999999999999999999999999999988875443 22
Q ss_pred EEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCC-Cccce
Q 036314 81 VTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAA-GNQVS 159 (347)
Q Consensus 81 ~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~-~~~~~ 159 (347)
..++++|.|.++++|..+.++... ...+.-.||+.+|-+|+..++|.+++|||+|.+|+||+.+..... .+...
T Consensus 160 ~~fvsas~Dqtl~Lw~~~~~~~~~-----~~~~~~~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s 234 (423)
T KOG0313|consen 160 CLFVSASMDQTLRLWKWNVGENKV-----KALKVCRGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSS 234 (423)
T ss_pred ceEEEecCCceEEEEEecCchhhh-----hHHhHhcccccceeEEEecCCCCeEEeecccceeeecccCCCccccccccc
Confidence 468999999999999998765322 222333599999999999999999999999999999994332211 11111
Q ss_pred eeeccCCCccccccccccccccccCCccceEEEEeCCCCeEEEEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCC
Q 036314 160 IKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGS 239 (347)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (347)
.+++.+........+++++.++.||+.+|.++.|++...++|+|+|.+|+.||++++....++.+++.+.|++.++ ..
T Consensus 235 -~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d~~v~yS~SwDHTIk~WDletg~~~~~~~~~ksl~~i~~~~-~~ 312 (423)
T KOG0313|consen 235 -NRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSDATVIYSVSWDHTIKVWDLETGGLKSTLTTNKSLNCISYSP-LS 312 (423)
T ss_pred -hhhhhhhhhhhcccccCceEEecccccceeeEEEcCCCceEeecccceEEEEEeecccceeeeecCcceeEeeccc-cc
Confidence 1222222223334456778899999999999999998899999999999999999999998898899999999976 56
Q ss_pred cEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCc-cceeecCCCCeE
Q 036314 240 ALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAW-PLSVIDSHKDKV 318 (347)
Q Consensus 240 ~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~-~~~~~~~h~~~v 318 (347)
.+|++|+.|..+++||+|.+......++|.+|.++|.+|.|+|.+.++|+++|.|+++++||+|... ++..+.+|.++|
T Consensus 313 ~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~~h~DKv 392 (423)
T KOG0313|consen 313 KLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIAGHNDKV 392 (423)
T ss_pred ceeeecCCCCceeecCCCCCCCceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCCCcceeeccCCceE
Confidence 7899999999999999998766667889999999999999999999999999999999999999877 899999999999
Q ss_pred EEEeecCCCEEEEccCCceEEEeecccC
Q 036314 319 LCADWWRGDSVISGGVDSKLCVSSGVSI 346 (347)
Q Consensus 319 ~~~~~~~~~~l~s~s~D~~v~vw~~~~~ 346 (347)
++++|+.+..++|||.|++|+|..|..+
T Consensus 393 l~vdW~~~~~IvSGGaD~~l~i~~~~~~ 420 (423)
T KOG0313|consen 393 LSVDWNEGGLIVSGGADNKLRIFKGSPI 420 (423)
T ss_pred EEEeccCCceEEeccCcceEEEeccccc
Confidence 9999999999999999999999998754
No 2
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=100.00 E-value=1.1e-52 Score=355.00 Aligned_cols=283 Identities=25% Similarity=0.429 Sum_probs=252.0
Q ss_pred CCCcCCceeeccCC-CCCEEEEEecCCeEEEEcCC-CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEec
Q 036314 20 PSLHDDWVSAVDGS-NPGFILTGCYDNLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKF 97 (347)
Q Consensus 20 ~~~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~-~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~ 97 (347)
..+-+.+|..+.|+ ++..|||||++|++++|+.+ ...+.+|.||...|.++.|+|.. ....||||+.||++++|++
T Consensus 171 Q~gd~rPis~~~fS~ds~~laT~swsG~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~--~~~~lat~s~Dgtvklw~~ 248 (459)
T KOG0272|consen 171 QVGDTRPISGCSFSRDSKHLATGSWSGLVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVD--SDLNLATASADGTVKLWKL 248 (459)
T ss_pred hccCCCcceeeEeecCCCeEEEeecCCceeEeecCCcceeEEEeccccceeeEEEccCC--CccceeeeccCCceeeecc
Confidence 34678899999998 67799999999999999964 67788999999999999999974 1246999999999999999
Q ss_pred cccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccccc
Q 036314 98 DAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGE 177 (347)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (347)
+..+ ++..|.+|...|..|+|+|+|++|+|+|.|.+.++||+++..
T Consensus 249 ~~e~---------~l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~------------------------- 294 (459)
T KOG0272|consen 249 SQET---------PLQDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKS------------------------- 294 (459)
T ss_pred CCCc---------chhhhhcchhhheeeeecCCCceeeecccccchhhcccccch-------------------------
Confidence 8653 556789999999999999999999999999999999998642
Q ss_pred ccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeeee-CeeeEEEEeeCCCCcEEEEecCCCcEEEEe
Q 036314 178 AISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFC-GKALNCIDIGGEGSALIAAGGSDPILRIWD 255 (347)
Q Consensus 178 ~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~la~~~~d~~i~iwd 255 (347)
.+-...||...|.+++| ++|-.++||+.|..=+|||+++++++..+.. .+++..++|+|+ +..+|+|+.|++++|||
T Consensus 295 ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr~im~L~gH~k~I~~V~fsPN-Gy~lATgs~Dnt~kVWD 373 (459)
T KOG0272|consen 295 ELLLQEGHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLRTGRCIMFLAGHIKEILSVAFSPN-GYHLATGSSDNTCKVWD 373 (459)
T ss_pred hhHhhcccccccceeEecCCCceeeccCccchhheeecccCcEEEEecccccceeeEeECCC-ceEEeecCCCCcEEEee
Confidence 34456899999999999 5788899999999999999999999987764 357899999765 57899999999999999
Q ss_pred CCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeec-CCCEEEEccC
Q 036314 256 PRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWW-RGDSVISGGV 334 (347)
Q Consensus 256 ~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~-~~~~l~s~s~ 334 (347)
++.. .++.++.+|.+-|+.|.|+|..+++|+|+|+|++++||.-+++.+++++.||.++|.+++++ +++.|+|+|.
T Consensus 374 LR~r---~~ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~~~~ksLaGHe~kV~s~Dis~d~~~i~t~s~ 450 (459)
T KOG0272|consen 374 LRMR---SELYTIPAHSNLVSQVKYSPQEGYFLVTASYDNTVKIWSTRTWSPLKSLAGHEGKVISLDISPDSQAIATSSF 450 (459)
T ss_pred eccc---ccceecccccchhhheEecccCCeEEEEcccCcceeeecCCCcccchhhcCCccceEEEEeccCCceEEEecc
Confidence 9863 34788999999999999999888999999999999999999999999999999999999997 5778999999
Q ss_pred CceEEEee
Q 036314 335 DSKLCVSS 342 (347)
Q Consensus 335 D~~v~vw~ 342 (347)
|+++++|.
T Consensus 451 DRT~KLW~ 458 (459)
T KOG0272|consen 451 DRTIKLWR 458 (459)
T ss_pred Cceeeecc
Confidence 99999996
No 3
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=9.9e-52 Score=345.34 Aligned_cols=304 Identities=27% Similarity=0.396 Sum_probs=254.1
Q ss_pred CceEEEEEEeccCCCCc------CCCCCcCCceeeccCCC-CCEEEEEecCCeEEEEcCC-CeEEEEeeccCCceEEEEE
Q 036314 1 EKVLEIEYIKAVAPQKE------EEPSLHDDWVSAVDGSN-PGFILTGCYDNLGRVWKAG-GVCTHILEGHCGAVSSVNI 72 (347)
Q Consensus 1 ~~~~~~~~~~~~~~~~~------~~~~~h~~~v~~~~~~~-~~~l~sg~~d~~i~iw~~~-~~~~~~l~~h~~~V~~v~~ 72 (347)
|+++.+-|+-...+..- ....||...|-+++|++ +..|||||.|.|+|+||.. ....++.++|..-|.+++|
T Consensus 86 e~~l~lvyqpqavfrvrpvtrCssS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvaw 165 (480)
T KOG0271|consen 86 EDVLTLVYQPQAVFRVRPVTRCSSSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAW 165 (480)
T ss_pred hheeeEEeccchhhcccccceeccccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCCCcceeecCCccEEEEEEE
Confidence 67888888833221111 12558999999999995 5699999999999999975 4467889999999999999
Q ss_pred eecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEe-----CCCCEEEEeeCCCcEEEEe
Q 036314 73 IKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAE-----TSGNMVCSGSWDCTISLWR 147 (347)
Q Consensus 73 ~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s-----~~~~~l~sgs~Dg~I~iwd 147 (347)
+|++ ..||||+.||+|++||..+++. ....|++|+..|++++|. |..++|+|+|.||+|+|||
T Consensus 166 sPDg----k~iASG~~dg~I~lwdpktg~~--------~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd 233 (480)
T KOG0271|consen 166 SPDG----KKIASGSKDGSIRLWDPKTGQQ--------IGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWD 233 (480)
T ss_pred CCCc----chhhccccCCeEEEecCCCCCc--------ccccccCcccceeEEeecccccCCCccceecccCCCCEEEEE
Confidence 9944 5799999999999999887764 345689999999999985 4578999999999999999
Q ss_pred cCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeCCCCeEEEEecCCcEEEEECCCCceeeeeeeC-
Q 036314 148 TNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCG- 226 (347)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~- 226 (347)
+.. ++++..+.+|+.+|.|+.|-...+++|+|.|++|++|+...|...+.+..+
T Consensus 234 ~~~-------------------------~~~~~~lsgHT~~VTCvrwGG~gliySgS~DrtIkvw~a~dG~~~r~lkGHa 288 (480)
T KOG0271|consen 234 TKL-------------------------GTCVRTLSGHTASVTCVRWGGEGLIYSGSQDRTIKVWRALDGKLCRELKGHA 288 (480)
T ss_pred ccC-------------------------ceEEEEeccCccceEEEEEcCCceEEecCCCceEEEEEccchhHHHhhcccc
Confidence 864 356778999999999999987789999999999999999998877766543
Q ss_pred eeeEEEEee-----------C------------------------CCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCC
Q 036314 227 KALNCIDIG-----------G------------------------EGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSH 271 (347)
Q Consensus 227 ~~~~~~~~~-----------~------------------------~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h 271 (347)
+-++.++++ + ..+..+++|++|.++.+|+.... ..++..+.+|
T Consensus 289 hwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~--kkpi~rmtgH 366 (480)
T KOG0271|consen 289 HWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKS--KKPITRMTGH 366 (480)
T ss_pred hheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEeccccc--ccchhhhhch
Confidence 234544442 1 12235899999999999998753 3457788899
Q ss_pred CCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeecC-CCEEEEccCCceEEEeecc
Q 036314 272 NSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 272 ~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~D~~v~vw~~~ 344 (347)
...|+.+.||||+. ++||+|.|+.||+||-++|+.+.+|.||-+.|+-++|+. .+.|+|||.|.|+++|+.-
T Consensus 367 q~lVn~V~fSPd~r-~IASaSFDkSVkLW~g~tGk~lasfRGHv~~VYqvawsaDsRLlVS~SkDsTLKvw~V~ 439 (480)
T KOG0271|consen 367 QALVNHVSFSPDGR-YIASASFDKSVKLWDGRTGKFLASFRGHVAAVYQVAWSADSRLLVSGSKDSTLKVWDVR 439 (480)
T ss_pred hhheeeEEECCCcc-EEEEeecccceeeeeCCCcchhhhhhhccceeEEEEeccCccEEEEcCCCceEEEEEee
Confidence 99999999999996 599999999999999999999999999999999999985 4569999999999999853
No 4
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=4.7e-47 Score=317.36 Aligned_cols=284 Identities=27% Similarity=0.413 Sum_probs=232.6
Q ss_pred CCCcCCceeeccCCC-CCEEEEEecCCeEEEEcCC-C-eEEEEeeccCCceEEEEEeecC-CCceEEEEEccCCCcEEEE
Q 036314 20 PSLHDDWVSAVDGSN-PGFILTGCYDNLGRVWKAG-G-VCTHILEGHCGAVSSVNIIKSD-GLKYVTVATASKDQTLRLW 95 (347)
Q Consensus 20 ~~~h~~~v~~~~~~~-~~~l~sg~~d~~i~iw~~~-~-~~~~~l~~h~~~V~~v~~~~~~-~~~~~~l~s~s~Dg~v~~w 95 (347)
-.+|..||.+++.++ +..||||+.||+|++||+. | .....|.||...|++++|.|-. ......||++|.||+|+||
T Consensus 153 ~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIW 232 (480)
T KOG0271|consen 153 CKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIW 232 (480)
T ss_pred ecCCccEEEEEEECCCcchhhccccCCeEEEecCCCCCcccccccCcccceeEEeecccccCCCccceecccCCCCEEEE
Confidence 458999999999884 5699999999999999974 4 4567899999999999997622 1123479999999999999
Q ss_pred eccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccc
Q 036314 96 KFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLE 175 (347)
Q Consensus 96 d~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (347)
|+..++ ++..+.||+.+|+|+.|..+| +++|||.|++||+|+..++
T Consensus 233 d~~~~~---------~~~~lsgHT~~VTCvrwGG~g-liySgS~DrtIkvw~a~dG------------------------ 278 (480)
T KOG0271|consen 233 DTKLGT---------CVRTLSGHTASVTCVRWGGEG-LIYSGSQDRTIKVWRALDG------------------------ 278 (480)
T ss_pred EccCce---------EEEEeccCccceEEEEEcCCc-eEEecCCCceEEEEEccch------------------------
Confidence 998764 556789999999999997554 8999999999999998764
Q ss_pred ccccccccCCccceEEEEeC-------------------------------------CCCeEEEEecCCcEEEEECCCCc
Q 036314 176 GEAISTLVGHTQCVSSVVWP-------------------------------------QQETIYSASWDHSVRTWDVEMGK 218 (347)
Q Consensus 176 ~~~~~~~~~h~~~v~~~~~~-------------------------------------~~~~l~s~s~dg~v~vwd~~~~~ 218 (347)
.+++.++||...|+.++.+ .++.++||+.|.++.+|+....+
T Consensus 279 -~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~k 357 (480)
T KOG0271|consen 279 -KLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSK 357 (480)
T ss_pred -hHHHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccc
Confidence 2344445555554444332 23569999999999999975443
Q ss_pred -eeeeee-eCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCc
Q 036314 219 -DLSDIF-CGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGK 296 (347)
Q Consensus 219 -~~~~~~-~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~ 296 (347)
++..+. +...++.+.|+| ++.++|+++.|..|++||.+.+ ..+.+|.||-+.|..|+|+.|. ++|+|||.|.+
T Consensus 358 kpi~rmtgHq~lVn~V~fSP-d~r~IASaSFDkSVkLW~g~tG---k~lasfRGHv~~VYqvawsaDs-RLlVS~SkDsT 432 (480)
T KOG0271|consen 358 KPITRMTGHQALVNHVSFSP-DGRYIASASFDKSVKLWDGRTG---KFLASFRGHVAAVYQVAWSADS-RLLVSGSKDST 432 (480)
T ss_pred cchhhhhchhhheeeEEECC-CccEEEEeecccceeeeeCCCc---chhhhhhhccceeEEEEeccCc-cEEEEcCCCce
Confidence 444443 344678899965 5679999999999999998754 3467888999999999999987 57999999999
Q ss_pred EEEEEcCCCccceeecCCCCeEEEEeecC-CCEEEEccCCceEEEeec
Q 036314 297 VMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKLCVSSG 343 (347)
Q Consensus 297 i~lwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~D~~v~vw~~ 343 (347)
+++||+++.+....+-||.++|.+++|+| |+++++|+.|+.+++|+.
T Consensus 433 LKvw~V~tkKl~~DLpGh~DEVf~vDwspDG~rV~sggkdkv~~lw~~ 480 (480)
T KOG0271|consen 433 LKVWDVRTKKLKQDLPGHADEVFAVDWSPDGQRVASGGKDKVLRLWRH 480 (480)
T ss_pred EEEEEeeeeeecccCCCCCceEEEEEecCCCceeecCCCceEEEeecC
Confidence 99999999888888999999999999985 889999999999999974
No 5
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-41 Score=273.76 Aligned_cols=279 Identities=27% Similarity=0.423 Sum_probs=225.2
Q ss_pred CCCCcCCceeeccCC--CCCEEEEEecCCeEEEEcCC------CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCC
Q 036314 19 EPSLHDDWVSAVDGS--NPGFILTGCYDNLGRVWKAG------GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQ 90 (347)
Q Consensus 19 ~~~~h~~~v~~~~~~--~~~~l~sg~~d~~i~iw~~~------~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg 90 (347)
...+|+++|++++.. +.+++++++.|.++.+|++. |..++.|.||+-.|..+..++++ .+.+++|.|+
T Consensus 10 tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg----~~alS~swD~ 85 (315)
T KOG0279|consen 10 TLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDG----NFALSASWDG 85 (315)
T ss_pred eecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCccccCceeeeeeccceEecceEEccCC----ceEEeccccc
Confidence 366999999999954 46799999999999999863 56688999999999999999854 4789999999
Q ss_pred cEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccc
Q 036314 91 TLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVE 170 (347)
Q Consensus 91 ~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~ 170 (347)
++|+||+.+++ +.+.|.||..-|.+++|++|.++++|||.|.+|++|++-.
T Consensus 86 ~lrlWDl~~g~---------~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g-------------------- 136 (315)
T KOG0279|consen 86 TLRLWDLATGE---------STRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLG-------------------- 136 (315)
T ss_pred eEEEEEecCCc---------EEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeecc--------------------
Confidence 99999998764 5567999999999999999999999999999999998753
Q ss_pred ccccccccccccc--CCccceEEEEeC-C--CCeEEEEecCCcEEEEECCCCceeeeeee-CeeeEEEEeeCCCCcEEEE
Q 036314 171 EPQLEGEAISTLV--GHTQCVSSVVWP-Q--QETIYSASWDHSVRTWDVEMGKDLSDIFC-GKALNCIDIGGEGSALIAA 244 (347)
Q Consensus 171 ~~~~~~~~~~~~~--~h~~~v~~~~~~-~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~la~ 244 (347)
.+..++. .+++.|.++.|+ + ..+|+++|+|++||+||+++.+....+.. ...++.+.++|+ +.+.++
T Consensus 137 ------~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpD-Gslcas 209 (315)
T KOG0279|consen 137 ------VCKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPD-GSLCAS 209 (315)
T ss_pred ------cEEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhccccccccEEEEEECCC-CCEEec
Confidence 2222332 237899999994 3 45799999999999999998765555443 346788898664 568899
Q ss_pred ecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeec----CC-----C
Q 036314 245 GGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVID----SH-----K 315 (347)
Q Consensus 245 ~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~----~h-----~ 315 (347)
|+.||.+.+||++..+ .+..+ +|.+.|.+++|+|+. + .+.+..+..|+|||+++...+..+. +. .
T Consensus 210 Ggkdg~~~LwdL~~~k---~lysl-~a~~~v~sl~fspnr-y-wL~~at~~sIkIwdl~~~~~v~~l~~d~~g~s~~~~~ 283 (315)
T KOG0279|consen 210 GGKDGEAMLWDLNEGK---NLYSL-EAFDIVNSLCFSPNR-Y-WLCAATATSIKIWDLESKAVVEELKLDGIGPSSKAGD 283 (315)
T ss_pred CCCCceEEEEEccCCc---eeEec-cCCCeEeeEEecCCc-e-eEeeccCCceEEEeccchhhhhhccccccccccccCC
Confidence 9999999999998643 24454 688999999999986 3 4445566679999999877665542 21 2
Q ss_pred CeEEEEeec-CCCEEEEccCCceEEEeec
Q 036314 316 DKVLCADWW-RGDSVISGGVDSKLCVSSG 343 (347)
Q Consensus 316 ~~v~~~~~~-~~~~l~s~s~D~~v~vw~~ 343 (347)
...++++|+ +|..|.+|-.|+.|++|..
T Consensus 284 ~~clslaws~dG~tLf~g~td~~irv~qv 312 (315)
T KOG0279|consen 284 PICLSLAWSADGQTLFAGYTDNVIRVWQV 312 (315)
T ss_pred cEEEEEEEcCCCcEEEeeecCCcEEEEEe
Confidence 345678887 6888999999999999974
No 6
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=100.00 E-value=2.3e-41 Score=268.51 Aligned_cols=269 Identities=20% Similarity=0.373 Sum_probs=222.8
Q ss_pred CEEEEEecCCeEEEEcC-CCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeee
Q 036314 36 GFILTGCYDNLGRVWKA-GGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKI 114 (347)
Q Consensus 36 ~~l~sg~~d~~i~iw~~-~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~ 114 (347)
-+|||+|+|.|||+|.. .|.|.++++.....|+.+.+.|+.. .||+++ ...||+||+.+++ +.++.+
T Consensus 11 viLvsA~YDhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~----~LAaa~-~qhvRlyD~~S~n-------p~Pv~t 78 (311)
T KOG0315|consen 11 VILVSAGYDHTIRFWQALTGICSRTIQHPDSQVNRLEITPDKK----DLAAAG-NQHVRLYDLNSNN-------PNPVAT 78 (311)
T ss_pred eEEEeccCcceeeeeehhcCeEEEEEecCccceeeEEEcCCcc----hhhhcc-CCeeEEEEccCCC-------CCceeE
Confidence 48999999999999995 6999999998889999999998543 466554 4589999998764 236788
Q ss_pred eeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe
Q 036314 115 LRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW 194 (347)
Q Consensus 115 ~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 194 (347)
+.+|+..|++|.|..+|++++|||.||++||||++...+. ..-.|..+|+++..
T Consensus 79 ~e~h~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~~~~q--------------------------R~~~~~spVn~vvl 132 (311)
T KOG0315|consen 79 FEGHTKNVTAVGFQCDGRWMYTGSEDGTVKIWDLRSLSCQ--------------------------RNYQHNSPVNTVVL 132 (311)
T ss_pred EeccCCceEEEEEeecCeEEEecCCCceEEEEeccCcccc--------------------------hhccCCCCcceEEe
Confidence 9999999999999999999999999999999999864321 12235678888875
Q ss_pred -CCCCeEEEEecCCcEEEEECCCCceeeeeee--CeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCC---CCCCeEEe
Q 036314 195 -PQQETIYSASWDHSVRTWDVEMGKDLSDIFC--GKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPG---TSAPVFQF 268 (347)
Q Consensus 195 -~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~---~~~~~~~~ 268 (347)
|++..|+++..+|.|++||+....+...+.. ...+..+.+.+++ ..++++..-|++++|++-... ...|+..+
T Consensus 133 hpnQteLis~dqsg~irvWDl~~~~c~~~liPe~~~~i~sl~v~~dg-sml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~ 211 (311)
T KOG0315|consen 133 HPNQTELISGDQSGNIRVWDLGENSCTHELIPEDDTSIQSLTVMPDG-SMLAAANNKGNCYVWRLLNHQTASELEPVHKF 211 (311)
T ss_pred cCCcceEEeecCCCcEEEEEccCCccccccCCCCCcceeeEEEcCCC-cEEEEecCCccEEEEEccCCCccccceEhhhe
Confidence 6677899999999999999988766555432 3467788887665 567777888999999975421 23456778
Q ss_pred cCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCC-ccceeecCCCCeEEEEeec-CCCEEEEccCCceEEEeecc
Q 036314 269 SSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTA-WPLSVIDSHKDKVLCADWW-RGDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 269 ~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~-~~~~~~~~h~~~v~~~~~~-~~~~l~s~s~D~~v~vw~~~ 344 (347)
..|..++..|.+||++. +||++|.|.+++||+.++. +...++++|+.-++.++|| +|.+|+|||.|+.+++|+..
T Consensus 212 ~ah~~~il~C~lSPd~k-~lat~ssdktv~iwn~~~~~kle~~l~gh~rWvWdc~FS~dg~YlvTassd~~~rlW~~~ 288 (311)
T KOG0315|consen 212 QAHNGHILRCLLSPDVK-YLATCSSDKTVKIWNTDDFFKLELVLTGHQRWVWDCAFSADGEYLVTASSDHTARLWDLS 288 (311)
T ss_pred ecccceEEEEEECCCCc-EEEeecCCceEEEEecCCceeeEEEeecCCceEEeeeeccCccEEEecCCCCceeecccc
Confidence 89999999999999996 5999999999999999987 4456789999999999997 78999999999999999864
No 7
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=100.00 E-value=6.3e-43 Score=295.90 Aligned_cols=242 Identities=24% Similarity=0.389 Sum_probs=213.5
Q ss_pred ccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCC--CCEEEEeeC
Q 036314 62 GHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETS--GNMVCSGSW 139 (347)
Q Consensus 62 ~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~--~~~l~sgs~ 139 (347)
|-+.+|..+.|+.++ ..|+|||.+|.+++|+.+.. ..+.+|.||+..|.++.|+|. +..++||+.
T Consensus 173 gd~rPis~~~fS~ds----~~laT~swsG~~kvW~~~~~---------~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~ 239 (459)
T KOG0272|consen 173 GDTRPISGCSFSRDS----KHLATGSWSGLVKVWSVPQC---------NLLQTLRGHTSRVGAAVFHPVDSDLNLATASA 239 (459)
T ss_pred cCCCcceeeEeecCC----CeEEEeecCCceeEeecCCc---------ceeEEEeccccceeeEEEccCCCccceeeecc
Confidence 456788999998844 47999999999999998654 356789999999999999997 569999999
Q ss_pred CCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCc
Q 036314 140 DCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGK 218 (347)
Q Consensus 140 Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~ 218 (347)
||++++|++... +.+..+.+|...|..++| |+|++|+|++.|.+-++||++++.
T Consensus 240 Dgtvklw~~~~e-------------------------~~l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~ 294 (459)
T KOG0272|consen 240 DGTVKLWKLSQE-------------------------TPLQDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKS 294 (459)
T ss_pred CCceeeeccCCC-------------------------cchhhhhcchhhheeeeecCCCceeeecccccchhhcccccch
Confidence 999999998652 357789999999999998 789999999999999999999987
Q ss_pred eeeeee-eCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcE
Q 036314 219 DLSDIF-CGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKV 297 (347)
Q Consensus 219 ~~~~~~-~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i 297 (347)
.+.... +.+.+.+++|.++ +.++++|+.|..-+|||+|.. ..+..+.+|.+.|.+|+|+|+| ++|||||.|+++
T Consensus 295 ElL~QEGHs~~v~~iaf~~D-GSL~~tGGlD~~~RvWDlRtg---r~im~L~gH~k~I~~V~fsPNG-y~lATgs~Dnt~ 369 (459)
T KOG0272|consen 295 ELLLQEGHSKGVFSIAFQPD-GSLAATGGLDSLGRVWDLRTG---RCIMFLAGHIKEILSVAFSPNG-YHLATGSSDNTC 369 (459)
T ss_pred hhHhhcccccccceeEecCC-CceeeccCccchhheeecccC---cEEEEecccccceeeEeECCCc-eEEeecCCCCcE
Confidence 765554 3457899999765 569999999999999999964 3578899999999999999998 689999999999
Q ss_pred EEEEcCCCccceeecCCCCeEEEEeecC--CCEEEEccCCceEEEeecccC
Q 036314 298 MLWDLRTAWPLSVIDSHKDKVLCADWWR--GDSVISGGVDSKLCVSSGVSI 346 (347)
Q Consensus 298 ~lwd~~~~~~~~~~~~h~~~v~~~~~~~--~~~l~s~s~D~~v~vw~~~~~ 346 (347)
+|||++....+.++-+|.+.|..|.|+| |++|+|+|.|++++||++.+-
T Consensus 370 kVWDLR~r~~ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~ 420 (459)
T KOG0272|consen 370 KVWDLRMRSELYTIPAHSNLVSQVKYSPQEGYFLVTASYDNTVKIWSTRTW 420 (459)
T ss_pred EEeeecccccceecccccchhhheEecccCCeEEEEcccCcceeeecCCCc
Confidence 9999999888999999999999999986 778999999999999998743
No 8
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=2.2e-41 Score=281.67 Aligned_cols=282 Identities=25% Similarity=0.414 Sum_probs=243.7
Q ss_pred CCCcCCceeeccCCCCC-EEEEEecCCeEEEEcC-CCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEec
Q 036314 20 PSLHDDWVSAVDGSNPG-FILTGCYDNLGRVWKA-GGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKF 97 (347)
Q Consensus 20 ~~~h~~~v~~~~~~~~~-~l~sg~~d~~i~iw~~-~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~ 97 (347)
..+|...|+.+-+.+.. ++|+++.|++|++||. +|++...|+||++.|..|.|...+ ..|+++|.|=.+++||.
T Consensus 104 l~g~r~~vt~v~~hp~~~~v~~as~d~tikv~D~~tg~~e~~LrGHt~sv~di~~~a~G----k~l~tcSsDl~~~LWd~ 179 (406)
T KOG0295|consen 104 LAGHRSSVTRVIFHPSEALVVSASEDATIKVFDTETGELERSLRGHTDSVFDISFDASG----KYLATCSSDLSAKLWDF 179 (406)
T ss_pred hhccccceeeeeeccCceEEEEecCCceEEEEEccchhhhhhhhccccceeEEEEecCc----cEEEecCCccchhheeH
Confidence 45799999999987654 7888999999999996 578888999999999999998744 58999999999999998
Q ss_pred cccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccccc
Q 036314 98 DAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGE 177 (347)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (347)
+.. .++++.+.+|+..|.++.|-|.|.+++|+++|.+|+.|++.++ .
T Consensus 180 ~~~--------~~c~ks~~gh~h~vS~V~f~P~gd~ilS~srD~tik~We~~tg-------------------------~ 226 (406)
T KOG0295|consen 180 DTF--------FRCIKSLIGHEHGVSSVFFLPLGDHILSCSRDNTIKAWECDTG-------------------------Y 226 (406)
T ss_pred HHH--------HHHHHHhcCcccceeeEEEEecCCeeeecccccceeEEecccc-------------------------e
Confidence 642 3466678899999999999999999999999999999998763 5
Q ss_pred ccccccCCccceEEEEeC-CCCeEEEEecCCcEEEEECCCCceeeeee-eCeeeEEEEeeCC--------------CCcE
Q 036314 178 AISTLVGHTQCVSSVVWP-QQETIYSASWDHSVRTWDVEMGKDLSDIF-CGKALNCIDIGGE--------------GSAL 241 (347)
Q Consensus 178 ~~~~~~~h~~~v~~~~~~-~~~~l~s~s~dg~v~vwd~~~~~~~~~~~-~~~~~~~~~~~~~--------------~~~~ 241 (347)
+++++.+|...|..+... +|..+++++.|.++++|-+.+.++...+. +..++.|++|.|. ++.+
T Consensus 227 cv~t~~~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~ 306 (406)
T KOG0295|consen 227 CVKTFPGHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQV 306 (406)
T ss_pred eEEeccCchHhEEEEEecCCeeEEEecCCCceEEEEEeccchhhhhhhccccceEEEEecccccCcchhhccCCCCCccE
Confidence 688999999999998864 67778999999999999998886544443 3457788877542 2358
Q ss_pred EEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEE
Q 036314 242 IAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCA 321 (347)
Q Consensus 242 la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~ 321 (347)
+.+++.|++|++||+.. ...++++.+|.+||..++|+|.|. +|+|+.+|+++++||+++.++++++..|+..|.++
T Consensus 307 l~s~SrDktIk~wdv~t---g~cL~tL~ghdnwVr~~af~p~Gk-yi~ScaDDktlrvwdl~~~~cmk~~~ah~hfvt~l 382 (406)
T KOG0295|consen 307 LGSGSRDKTIKIWDVST---GMCLFTLVGHDNWVRGVAFSPGGK-YILSCADDKTLRVWDLKNLQCMKTLEAHEHFVTSL 382 (406)
T ss_pred EEeecccceEEEEeccC---CeEEEEEecccceeeeeEEcCCCe-EEEEEecCCcEEEEEeccceeeeccCCCcceeEEE
Confidence 89999999999999974 456899999999999999999986 59999999999999999999999999999999999
Q ss_pred eecC-CCEEEEccCCceEEEee
Q 036314 322 DWWR-GDSVISGGVDSKLCVSS 342 (347)
Q Consensus 322 ~~~~-~~~l~s~s~D~~v~vw~ 342 (347)
+|+. -.+++|||-|.++++|-
T Consensus 383 Dfh~~~p~VvTGsVdqt~KvwE 404 (406)
T KOG0295|consen 383 DFHKTAPYVVTGSVDQTVKVWE 404 (406)
T ss_pred ecCCCCceEEeccccceeeeee
Confidence 9974 44899999999999993
No 9
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=100.00 E-value=5.4e-40 Score=266.29 Aligned_cols=291 Identities=22% Similarity=0.284 Sum_probs=243.5
Q ss_pred CcCCCCCcCCceeeccCC-CCCEEEEEecCCeEEEEcC-CCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEE
Q 036314 16 KEEEPSLHDDWVSAVDGS-NPGFILTGCYDNLGRVWKA-GGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLR 93 (347)
Q Consensus 16 ~~~~~~~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~-~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~ 93 (347)
.-..+.||.+-|.++.++ +...|+|+|.||.+.|||. .+..++.++-...-|...+|+|++. .+|+|+.|+..-
T Consensus 47 ~rr~LkGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~----~VAcGGLdN~Cs 122 (343)
T KOG0286|consen 47 TRRTLKGHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGN----FVACGGLDNKCS 122 (343)
T ss_pred eEEEecccccceeeeEecCCcCeEEeeccCCeEEEEEcccccceeEEecCceeEEEEEECCCCC----eEEecCcCceeE
Confidence 345688999999999988 5679999999999999996 5667778888888999999999654 799999999999
Q ss_pred EEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccc
Q 036314 94 LWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQ 173 (347)
Q Consensus 94 ~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (347)
||++...+- ....+..+.+.+|++-+.++.|-+| ..|+|+|-|.++.+||++++
T Consensus 123 iy~ls~~d~---~g~~~v~r~l~gHtgylScC~f~dD-~~ilT~SGD~TCalWDie~g---------------------- 176 (343)
T KOG0286|consen 123 IYPLSTRDA---EGNVRVSRELAGHTGYLSCCRFLDD-NHILTGSGDMTCALWDIETG---------------------- 176 (343)
T ss_pred EEecccccc---cccceeeeeecCccceeEEEEEcCC-CceEecCCCceEEEEEcccc----------------------
Confidence 999974311 1122344578999999999999885 56889999999999999864
Q ss_pred ccccccccccCCccceEEEEeC--CCCeEEEEecCCcEEEEECCCCceeeeeeeC-eeeEEEEeeCCCCcEEEEecCCCc
Q 036314 174 LEGEAISTLVGHTQCVSSVVWP--QQETIYSASWDHSVRTWDVEMGKDLSDIFCG-KALNCIDIGGEGSALIAAGGSDPI 250 (347)
Q Consensus 174 ~~~~~~~~~~~h~~~v~~~~~~--~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~la~~~~d~~ 250 (347)
..+..+.||++.|.++.++ +++.++||+.|++-+|||++.+.+...+..+ ..++.+.|.|++ .-|++|++|++
T Consensus 177 ---~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF~ghesDINsv~ffP~G-~afatGSDD~t 252 (343)
T KOG0286|consen 177 ---QQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTFEGHESDINSVRFFPSG-DAFATGSDDAT 252 (343)
T ss_pred ---eEEEEecCCcccEEEEecCCCCCCeEEecccccceeeeeccCcceeEeecccccccceEEEccCC-CeeeecCCCce
Confidence 4567889999999999974 6788999999999999999999888877654 368999998765 57899999999
Q ss_pred EEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeecC-CCEE
Q 036314 251 LRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSV 329 (347)
Q Consensus 251 i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l 329 (347)
+++||+|.. +...++.-..-...|++++||..|+ +|.+|..|.++.+||.-+++.+..+.||.+.|.|+.-+| |.-+
T Consensus 253 cRlyDlRaD-~~~a~ys~~~~~~gitSv~FS~SGR-lLfagy~d~~c~vWDtlk~e~vg~L~GHeNRvScl~~s~DG~av 330 (343)
T KOG0286|consen 253 CRLYDLRAD-QELAVYSHDSIICGITSVAFSKSGR-LLFAGYDDFTCNVWDTLKGERVGVLAGHENRVSCLGVSPDGMAV 330 (343)
T ss_pred eEEEeecCC-cEEeeeccCcccCCceeEEEccccc-EEEeeecCCceeEeeccccceEEEeeccCCeeEEEEECCCCcEE
Confidence 999999863 2323333333345799999999885 688889999999999999999999999999999999975 6679
Q ss_pred EEccCCceEEEee
Q 036314 330 ISGGVDSKLCVSS 342 (347)
Q Consensus 330 ~s~s~D~~v~vw~ 342 (347)
+|||.|.+++||.
T Consensus 331 ~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 331 ATGSWDSTLRIWA 343 (343)
T ss_pred EecchhHheeecC
Confidence 9999999999995
No 10
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=100.00 E-value=3.6e-42 Score=285.02 Aligned_cols=276 Identities=24% Similarity=0.428 Sum_probs=232.0
Q ss_pred cCCCCCcCCceeeccCCCCCEEEEEecCCeEEEEcCCC-eEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEE
Q 036314 17 EEEPSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAGG-VCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLW 95 (347)
Q Consensus 17 ~~~~~~h~~~v~~~~~~~~~~l~sg~~d~~i~iw~~~~-~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~w 95 (347)
.+.++...+.|.|+.. +++.++||..|+||++||... .|+..|.||++.|.|+.+.. ..+++||.|.+|++|
T Consensus 190 inc~Se~skgVYClQY-DD~kiVSGlrDnTikiWD~n~~~c~~~L~GHtGSVLCLqyd~------rviisGSSDsTvrvW 262 (499)
T KOG0281|consen 190 INCRSENSKGVYCLQY-DDEKIVSGLRDNTIKIWDKNSLECLKILTGHTGSVLCLQYDE------RVIVSGSSDSTVRVW 262 (499)
T ss_pred ecCCcccCCceEEEEe-cchhhhcccccCceEEeccccHHHHHhhhcCCCcEEeeeccc------eEEEecCCCceEEEE
Confidence 3445556788999987 456899999999999999754 68889999999999999854 479999999999999
Q ss_pred eccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccc
Q 036314 96 KFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLE 175 (347)
Q Consensus 96 d~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (347)
|+++++ ++.++-+|..+|..+.|+ +.+++|+|.|.+|++||+..+. +
T Consensus 263 Dv~tge---------~l~tlihHceaVLhlrf~--ng~mvtcSkDrsiaVWdm~sps----------------------~ 309 (499)
T KOG0281|consen 263 DVNTGE---------PLNTLIHHCEAVLHLRFS--NGYMVTCSKDRSIAVWDMASPT----------------------D 309 (499)
T ss_pred eccCCc---------hhhHHhhhcceeEEEEEe--CCEEEEecCCceeEEEeccCch----------------------H
Confidence 999886 455677899999999997 5699999999999999987642 1
Q ss_pred ccccccccCCccceEEEEeCCCCeEEEEecCCcEEEEECCCCceeeeeeeCe-eeEEEEeeCCCCcEEEEecCCCcEEEE
Q 036314 176 GEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGK-ALNCIDIGGEGSALIAAGGSDPILRIW 254 (347)
Q Consensus 176 ~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~la~~~~d~~i~iw 254 (347)
-++.+.+.||..+|+.+.|.+ ++++++|.|++|++|++.+++.++.+..+. .+.|+.. .+.++++|+.|++|++|
T Consensus 310 it~rrVLvGHrAaVNvVdfd~-kyIVsASgDRTikvW~~st~efvRtl~gHkRGIAClQY---r~rlvVSGSSDntIRlw 385 (499)
T KOG0281|consen 310 ITLRRVLVGHRAAVNVVDFDD-KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY---RDRLVVSGSSDNTIRLW 385 (499)
T ss_pred HHHHHHHhhhhhheeeecccc-ceEEEecCCceEEEEeccceeeehhhhcccccceehhc---cCeEEEecCCCceEEEE
Confidence 234568899999999998854 699999999999999999999988887544 5667665 45689999999999999
Q ss_pred eCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCcc---------ceeecCCCCeEEEEeecC
Q 036314 255 DPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWP---------LSVIDSHKDKVLCADWWR 325 (347)
Q Consensus 255 d~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~---------~~~~~~h~~~v~~~~~~~ 325 (347)
|+..+ ..+..++||..-|.++.|+.. .+++|++||+|++||+..+.. +.++..|++.|..+.| +
T Consensus 386 di~~G---~cLRvLeGHEeLvRciRFd~k---rIVSGaYDGkikvWdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQF-D 458 (499)
T KOG0281|consen 386 DIECG---ACLRVLEGHEELVRCIRFDNK---RIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF-D 458 (499)
T ss_pred ecccc---HHHHHHhchHHhhhheeecCc---eeeeccccceEEEEecccccCCcccccchHHHhhhhccceeEEEee-c
Confidence 99864 346778999999999999753 599999999999999987643 3345679999999999 5
Q ss_pred CCEEEEccCCceEEEeec
Q 036314 326 GDSVISGGVDSKLCVSSG 343 (347)
Q Consensus 326 ~~~l~s~s~D~~v~vw~~ 343 (347)
..++++++.|.+|.||+.
T Consensus 459 ~fqIvsssHddtILiWdF 476 (499)
T KOG0281|consen 459 EFQIISSSHDDTILIWDF 476 (499)
T ss_pred ceEEEeccCCCeEEEEEc
Confidence 668999999999999985
No 11
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=100.00 E-value=3.5e-40 Score=274.10 Aligned_cols=278 Identities=22% Similarity=0.422 Sum_probs=233.6
Q ss_pred CCCcCCceeeccCCCC-CEEEEEecCCeEEEEcCC-CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEec
Q 036314 20 PSLHDDWVSAVDGSNP-GFILTGCYDNLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKF 97 (347)
Q Consensus 20 ~~~h~~~v~~~~~~~~-~~l~sg~~d~~i~iw~~~-~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~ 97 (347)
+.+|.+||.++++.++ ..|+||+.|++|+|||+. |+...+|.||-..|..+++++- .-+|.++++|++||.||+
T Consensus 147 i~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~r----HpYlFs~gedk~VKCwDL 222 (460)
T KOG0285|consen 147 ISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKR----HPYLFSAGEDKQVKCWDL 222 (460)
T ss_pred hhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeeccc----CceEEEecCCCeeEEEec
Confidence 6799999999998864 599999999999999975 7788899999999999999873 347999999999999999
Q ss_pred cccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccccc
Q 036314 98 DAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGE 177 (347)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (347)
+.++. ++...||-..|.|++.+|.-+.|++|++|.++|+||+++. .
T Consensus 223 e~nkv---------IR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr-------------------------~ 268 (460)
T KOG0285|consen 223 EYNKV---------IRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTR-------------------------A 268 (460)
T ss_pred hhhhh---------HHHhccccceeEEEeccccceeEEecCCcceEEEeeeccc-------------------------c
Confidence 87754 4457799999999999999999999999999999999863 2
Q ss_pred ccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeeeeC-eeeEEEEeeCCCCcEEEEecCCCcEEEEe
Q 036314 178 AISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCG-KALNCIDIGGEGSALIAAGGSDPILRIWD 255 (347)
Q Consensus 178 ~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~la~~~~d~~i~iwd 255 (347)
.+.++.||+.+|..+.+ +.+..++++|.|++|++||++.++....+..+ ..+.+++++|. ...||+++.| .|+-|+
T Consensus 269 ~V~~l~GH~~~V~~V~~~~~dpqvit~S~D~tvrlWDl~agkt~~tlt~hkksvral~lhP~-e~~fASas~d-nik~w~ 346 (460)
T KOG0285|consen 269 SVHVLSGHTNPVASVMCQPTDPQVITGSHDSTVRLWDLRAGKTMITLTHHKKSVRALCLHPK-ENLFASASPD-NIKQWK 346 (460)
T ss_pred eEEEecCCCCcceeEEeecCCCceEEecCCceEEEeeeccCceeEeeecccceeeEEecCCc-hhhhhccCCc-cceecc
Confidence 35688999999999988 45778999999999999999999888777654 46889998764 4577887765 589999
Q ss_pred CCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeec--------CCCCeEEEEeec-CC
Q 036314 256 PRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVID--------SHKDKVLCADWW-RG 326 (347)
Q Consensus 256 ~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~--------~h~~~v~~~~~~-~~ 326 (347)
+..+. .+..+++|+.-|+++..+.|+ .+++|+.+|.+..||+++|-..+.++ .-+..|++.+|- .|
T Consensus 347 ~p~g~---f~~nlsgh~~iintl~~nsD~--v~~~G~dng~~~fwdwksg~nyQ~~~t~vqpGSl~sEagI~as~fDktg 421 (460)
T KOG0285|consen 347 LPEGE---FLQNLSGHNAIINTLSVNSDG--VLVSGGDNGSIMFWDWKSGHNYQRGQTIVQPGSLESEAGIFASCFDKTG 421 (460)
T ss_pred CCccc---hhhccccccceeeeeeeccCc--eEEEcCCceEEEEEecCcCcccccccccccCCccccccceeEEeecccC
Confidence 86532 355689999999999999887 58999999999999999874433321 123467888884 58
Q ss_pred CEEEEccCCceEEEee
Q 036314 327 DSVISGGVDSKLCVSS 342 (347)
Q Consensus 327 ~~l~s~s~D~~v~vw~ 342 (347)
.+|+||..|.+|++|-
T Consensus 422 ~rlit~eadKtIk~~k 437 (460)
T KOG0285|consen 422 SRLITGEADKTIKMYK 437 (460)
T ss_pred ceEEeccCCcceEEEe
Confidence 8999999999999995
No 12
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=100.00 E-value=2e-39 Score=279.02 Aligned_cols=288 Identities=21% Similarity=0.360 Sum_probs=239.0
Q ss_pred CCCcC-CCCCcCCceeeccCC--CCCEEEEEecCCeEEEEcC--CCeEEEEeeccCCceEEEEEeecCCCceEEEEEccC
Q 036314 14 PQKEE-EPSLHDDWVSAVDGS--NPGFILTGCYDNLGRVWKA--GGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASK 88 (347)
Q Consensus 14 ~~~~~-~~~~h~~~v~~~~~~--~~~~l~sg~~d~~i~iw~~--~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~ 88 (347)
|.+.. ...+|+..|+++.+. .+.+|+++|.|+.|+||+. .+.|+++|.||..+|.++.|+..+ ..++|+|.
T Consensus 203 Pkk~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g----~~fLS~sf 278 (503)
T KOG0282|consen 203 PKKLSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCG----TSFLSASF 278 (503)
T ss_pred cHhheeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccC----Ceeeeeec
Confidence 34433 356999999999965 4679999999999999997 478999999999999999998844 46899999
Q ss_pred CCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCC-CEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCC
Q 036314 89 DQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSG-NMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNN 167 (347)
Q Consensus 89 Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~-~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~ 167 (347)
|+.||+||+++|+++ ..+.. ...+.|+.|+||+ +.+++|+.|+.|+.||++++
T Consensus 279 D~~lKlwDtETG~~~---------~~f~~-~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~---------------- 332 (503)
T KOG0282|consen 279 DRFLKLWDTETGQVL---------SRFHL-DKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSG---------------- 332 (503)
T ss_pred ceeeeeeccccceEE---------EEEec-CCCceeeecCCCCCcEEEEecCCCcEEEEeccch----------------
Confidence 999999999998642 23321 3446889999998 89999999999999999864
Q ss_pred ccccccccccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeeeeC--eeeEEEEeeCCCCcEEEE
Q 036314 168 QVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCG--KALNCIDIGGEGSALIAA 244 (347)
Q Consensus 168 ~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~la~ 244 (347)
+.++.+..|-++|..+.| +++.++++++.|++++||+.+.+..++.+... ....|+..+|.+ ..+++
T Consensus 333 ---------kvvqeYd~hLg~i~~i~F~~~g~rFissSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~-~~~~a 402 (503)
T KOG0282|consen 333 ---------KVVQEYDRHLGAILDITFVDEGRRFISSSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNG-KWFAA 402 (503)
T ss_pred ---------HHHHHHHhhhhheeeeEEccCCceEeeeccCccEEEEEcCCCccchhhcchhhccCcceecCCCC-Ceehh
Confidence 456778888899999987 67889999999999999999988777655433 245677887665 57788
Q ss_pred ecCCCcEEEEeCCCCCCCCCeEEecCCCC--CeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEe
Q 036314 245 GGSDPILRIWDPRKPGTSAPVFQFSSHNS--WISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCAD 322 (347)
Q Consensus 245 ~~~d~~i~iwd~~~~~~~~~~~~~~~h~~--~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~ 322 (347)
-+-|+.|.+|.+..+-+......+.||.. +-..|.|||||. +|++|+.||.+.+||+++-+.+..+.+|...|..++
T Consensus 403 Qs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG~-~l~SGdsdG~v~~wdwkt~kl~~~lkah~~~ci~v~ 481 (503)
T KOG0282|consen 403 QSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDGR-TLCSGDSDGKVNFWDWKTTKLVSKLKAHDQPCIGVD 481 (503)
T ss_pred hccCceEEEEecccccccCHhhhhcceeccCceeeEEEcCCCC-eEEeecCCccEEEeechhhhhhhccccCCcceEEEE
Confidence 88999999998765433334556778864 567789999997 599999999999999999888999999999999999
Q ss_pred ecCC--CEEEEccCCceEEEee
Q 036314 323 WWRG--DSVISGGVDSKLCVSS 342 (347)
Q Consensus 323 ~~~~--~~l~s~s~D~~v~vw~ 342 (347)
|+|. ..+||||.||-|++|.
T Consensus 482 wHP~e~Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 482 WHPVEPSKVATCGWDGLIKIWD 503 (503)
T ss_pred ecCCCcceeEecccCceeEecC
Confidence 9984 4699999999999995
No 13
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=100.00 E-value=2.4e-37 Score=268.61 Aligned_cols=302 Identities=19% Similarity=0.329 Sum_probs=237.9
Q ss_pred cCCCCcCC-CCCcCCceeeccCC-CCCEEEEEecCCeEEEEcC-CCeEEEEee---ccCCceEEEEEeecCCCceEEEEE
Q 036314 12 VAPQKEEE-PSLHDDWVSAVDGS-NPGFILTGCYDNLGRVWKA-GGVCTHILE---GHCGAVSSVNIIKSDGLKYVTVAT 85 (347)
Q Consensus 12 ~~~~~~~~-~~~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~-~~~~~~~l~---~h~~~V~~v~~~~~~~~~~~~l~s 85 (347)
=+|++++. ...|..+|.+++++ +|.++||.|.||++.+||- .|..+-.|. +|.+.|.++.|+|+. ..++|
T Consensus 177 GPPFKFk~s~r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs----~~~~T 252 (603)
T KOG0318|consen 177 GPPFKFKSSFREHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDS----TQFLT 252 (603)
T ss_pred CCCeeeeecccccccceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEecCCCCccccEEEEEECCCC----ceEEE
Confidence 45889986 55799999999999 4669999999999999995 577787888 999999999999944 47999
Q ss_pred ccCCCcEEEEecccccccc----------------------------------CccccceeeeeeccccceEEEEEeCCC
Q 036314 86 ASKDQTLRLWKFDAEELVN----------------------------------HPKKIRSFKILRGHKASVHSIAAETSG 131 (347)
Q Consensus 86 ~s~Dg~v~~wd~~~~~~~~----------------------------------~~~~~~~~~~~~~h~~~V~~v~~s~~~ 131 (347)
+|.|.++|+||+.++++.. .+....+++++.||..+|++++.++++
T Consensus 253 ~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~ 332 (603)
T KOG0318|consen 253 VSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDG 332 (603)
T ss_pred ecCCceEEEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCC
Confidence 9999999999998776532 112234556789999999999999999
Q ss_pred CEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeCCCCeEEEEecCCcEEE
Q 036314 132 NMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRT 211 (347)
Q Consensus 132 ~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~dg~v~v 211 (347)
++|+||+.||.|.-|+...+.... ..-++|+..|.+++-...+.+++.++|.++++
T Consensus 333 ~~i~SgsyDG~I~~W~~~~g~~~~------------------------~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~~ 388 (603)
T KOG0318|consen 333 KTIYSGSYDGHINSWDSGSGTSDR------------------------LAGKGHTNQIKGMAASESGELFTIGWDDTLRV 388 (603)
T ss_pred CEEEeeccCceEEEEecCCccccc------------------------cccccccceEEEEeecCCCcEEEEecCCeEEE
Confidence 999999999999999987653210 01156888888887666677888999999999
Q ss_pred EECCCCceeee-------------------------------ee---------eCeeeEEEEeeCCCCcEEEEecCCCcE
Q 036314 212 WDVEMGKDLSD-------------------------------IF---------CGKALNCIDIGGEGSALIAAGGSDPIL 251 (347)
Q Consensus 212 wd~~~~~~~~~-------------------------------~~---------~~~~~~~~~~~~~~~~~la~~~~d~~i 251 (347)
.++..+..... ++ ......++++++ ++..+|.|++|++|
T Consensus 389 ~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~-~~~~vaVGG~Dgkv 467 (603)
T KOG0318|consen 389 ISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAVSP-DGSEVAVGGQDGKV 467 (603)
T ss_pred EecccCcccccceeecCCCceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccceEEEcC-CCCEEEEecccceE
Confidence 87643211000 00 011234566654 45688999999999
Q ss_pred EEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccc-eeecCCCCeEEEEeecCCC-EE
Q 036314 252 RIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPL-SVIDSHKDKVLCADWWRGD-SV 329 (347)
Q Consensus 252 ~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~-~~~~~h~~~v~~~~~~~~~-~l 329 (347)
++|.+...+. .+......|...|+++++|||+. +||+|...+.+-+||+.+.+.. ..+.-|+++|.|++|+|.+ ++
T Consensus 468 hvysl~g~~l-~ee~~~~~h~a~iT~vaySpd~~-yla~~Da~rkvv~yd~~s~~~~~~~w~FHtakI~~~aWsP~n~~v 545 (603)
T KOG0318|consen 468 HVYSLSGDEL-KEEAKLLEHRAAITDVAYSPDGA-YLAAGDASRKVVLYDVASREVKTNRWAFHTAKINCVAWSPNNKLV 545 (603)
T ss_pred EEEEecCCcc-cceeeeecccCCceEEEECCCCc-EEEEeccCCcEEEEEcccCceecceeeeeeeeEEEEEeCCCceEE
Confidence 9999875432 33445668999999999999996 5999999999999999987652 3455699999999999865 69
Q ss_pred EEccCCceEEEeecc
Q 036314 330 ISGGVDSKLCVSSGV 344 (347)
Q Consensus 330 ~s~s~D~~v~vw~~~ 344 (347)
||||.|.+|.||+..
T Consensus 546 ATGSlDt~Viiysv~ 560 (603)
T KOG0318|consen 546 ATGSLDTNVIIYSVK 560 (603)
T ss_pred EeccccceEEEEEcc
Confidence 999999999999853
No 14
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=100.00 E-value=2.7e-39 Score=272.81 Aligned_cols=278 Identities=21% Similarity=0.345 Sum_probs=235.0
Q ss_pred CCceeeccCC-CCCEEEEEecCCeEEEEcCCCe-EEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccc
Q 036314 24 DDWVSAVDGS-NPGFILTGCYDNLGRVWKAGGV-CTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEE 101 (347)
Q Consensus 24 ~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~~~-~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~ 101 (347)
+..|..|..+ +|..|++|+.-|...+|+.... ...++..|...|.++.|++++ ..++||+.+|.||+|+.+-+.
T Consensus 96 kc~V~~v~WtPeGRRLltgs~SGEFtLWNg~~fnFEtilQaHDs~Vr~m~ws~~g----~wmiSgD~gG~iKyWqpnmnn 171 (464)
T KOG0284|consen 96 KCPVNVVRWTPEGRRLLTGSQSGEFTLWNGTSFNFETILQAHDSPVRTMKWSHNG----TWMISGDKGGMIKYWQPNMNN 171 (464)
T ss_pred ccceeeEEEcCCCceeEeecccccEEEecCceeeHHHHhhhhcccceeEEEccCC----CEEEEcCCCceEEecccchhh
Confidence 3467777777 4579999999999999997542 234578999999999999854 479999999999999976432
Q ss_pred cccCccccceeeeeeccc-cceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccc
Q 036314 102 LVNHPKKIRSFKILRGHK-ASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAIS 180 (347)
Q Consensus 102 ~~~~~~~~~~~~~~~~h~-~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (347)
++.+.+|. ..|++++|+|+...|+|+|.||+|+|||.... +..+
T Consensus 172 ----------Vk~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~-------------------------kee~ 216 (464)
T KOG0284|consen 172 ----------VKIIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMP-------------------------KEER 216 (464)
T ss_pred ----------hHHhhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCC-------------------------chhh
Confidence 23445554 88999999999999999999999999997643 2234
Q ss_pred cccCCccceEEEEeC-CCCeEEEEecCCcEEEEECCCCceeeeeee-CeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCC
Q 036314 181 TLVGHTQCVSSVVWP-QQETIYSASWDHSVRTWDVEMGKDLSDIFC-GKALNCIDIGGEGSALIAAGGSDPILRIWDPRK 258 (347)
Q Consensus 181 ~~~~h~~~v~~~~~~-~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~ 258 (347)
.+.||.-.|.++.|. ....|+++|.|+.|++||.++++++.++.. .+.+..+.|.+++ +.|++++.|..+++||++.
T Consensus 217 vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg~cl~tlh~HKntVl~~~f~~n~-N~Llt~skD~~~kv~DiR~ 295 (464)
T KOG0284|consen 217 VLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSGSCLATLHGHKNTVLAVKFNPNG-NWLLTGSKDQSCKVFDIRT 295 (464)
T ss_pred eeccCCCCcceeccCCccceeEEccCCceeEeecCCCcchhhhhhhccceEEEEEEcCCC-CeeEEccCCceEEEEehhH
Confidence 678999999999994 566899999999999999999999988864 4568889997765 8999999999999999983
Q ss_pred CCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceee-cCCCCeEEEEeecC-CCEEEEccCCc
Q 036314 259 PGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVI-DSHKDKVLCADWWR-GDSVISGGVDS 336 (347)
Q Consensus 259 ~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~-~~h~~~v~~~~~~~-~~~l~s~s~D~ 336 (347)
.+.++++.+|.+.|.++.|+|-...+|.+|+.||.|..|.+...+++..+ .+|...|++++|+| |-.|++|+.|.
T Consensus 296 ---mkEl~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v~~~~p~~~i~~AHd~~iwsl~~hPlGhil~tgsnd~ 372 (464)
T KOG0284|consen 296 ---MKELFTYRGHKKDVTSLTWHPLNESLFTSGGSDGSVVHWVVGLEEPLGEIPPAHDGEIWSLAYHPLGHILATGSNDR 372 (464)
T ss_pred ---hHHHHHhhcchhhheeeccccccccceeeccCCCceEEEeccccccccCCCcccccceeeeeccccceeEeecCCCc
Confidence 34578889999999999999998889999999999999999866777665 57999999999998 88899999999
Q ss_pred eEEEeecc
Q 036314 337 KLCVSSGV 344 (347)
Q Consensus 337 ~v~vw~~~ 344 (347)
++++|.-+
T Consensus 373 t~rfw~r~ 380 (464)
T KOG0284|consen 373 TVRFWTRN 380 (464)
T ss_pred ceeeeccC
Confidence 99999743
No 15
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-37 Score=249.02 Aligned_cols=250 Identities=23% Similarity=0.376 Sum_probs=210.8
Q ss_pred EEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEE
Q 036314 57 THILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCS 136 (347)
Q Consensus 57 ~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~s 136 (347)
.-+|.+|++.|.+++..+.+. ..+++++.|.++.+|++...+ .+.-.+.+.+.||+..|..++.++||++++|
T Consensus 8 ~~tl~gh~d~Vt~la~~~~~~---~~l~sasrDk~ii~W~L~~dd----~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS 80 (315)
T KOG0279|consen 8 RGTLEGHTDWVTALAIKIKNS---DILVSASRDKTIIVWKLTSDD----IKYGVPVRRLTGHSHFVSDVVLSSDGNFALS 80 (315)
T ss_pred eeeecCCCceEEEEEeecCCC---ceEEEcccceEEEEEEeccCc----cccCceeeeeeccceEecceEEccCCceEEe
Confidence 347999999999999988633 479999999999999997642 2334567789999999999999999999999
Q ss_pred eeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECC
Q 036314 137 GSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVE 215 (347)
Q Consensus 137 gs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~ 215 (347)
+|+|+++++||+..+ +..+.+.||+..|.++++ +++.+++|||.|++|++||+.
T Consensus 81 ~swD~~lrlWDl~~g-------------------------~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~ 135 (315)
T KOG0279|consen 81 ASWDGTLRLWDLATG-------------------------ESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTL 135 (315)
T ss_pred ccccceEEEEEecCC-------------------------cEEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeec
Confidence 999999999999864 345678999999999998 577889999999999999987
Q ss_pred CCceeeeeee---CeeeEEEEeeCCC-CcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEE
Q 036314 216 MGKDLSDIFC---GKALNCIDIGGEG-SALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291 (347)
Q Consensus 216 ~~~~~~~~~~---~~~~~~~~~~~~~-~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~ 291 (347)
.. +..++.. ..=+.|+.|+|.. ...|++++.|++|++||++. ......+.+|.++++.+.+||||. +.++|
T Consensus 136 g~-ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~---~~l~~~~~gh~~~v~t~~vSpDGs-lcasG 210 (315)
T KOG0279|consen 136 GV-CKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRN---CQLRTTFIGHSGYVNTVTVSPDGS-LCASG 210 (315)
T ss_pred cc-EEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCC---cchhhccccccccEEEEEECCCCC-EEecC
Confidence 54 3334432 2347999998874 56889999999999999985 334567889999999999999996 69999
Q ss_pred eCCCcEEEEEcCCCccceeecCCCCeEEEEeecCCCEEEEccCCceEEEeecc
Q 036314 292 SYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 292 s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~D~~v~vw~~~ 344 (347)
+.||.+.+||++.++.+..+. |...|.+++|+|..+-..+..+..|+||+..
T Consensus 211 gkdg~~~LwdL~~~k~lysl~-a~~~v~sl~fspnrywL~~at~~sIkIwdl~ 262 (315)
T KOG0279|consen 211 GKDGEAMLWDLNEGKNLYSLE-AFDIVNSLCFSPNRYWLCAATATSIKIWDLE 262 (315)
T ss_pred CCCceEEEEEccCCceeEecc-CCCeEeeEEecCCceeEeeccCCceEEEecc
Confidence 999999999999999888875 6789999999998875555667779999875
No 16
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=8.2e-38 Score=281.19 Aligned_cols=312 Identities=21% Similarity=0.310 Sum_probs=240.2
Q ss_pred CcCCceeeccCCC-CCEEEEEecCCeEEEEcCC-CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccc
Q 036314 22 LHDDWVSAVDGSN-PGFILTGCYDNLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDA 99 (347)
Q Consensus 22 ~h~~~v~~~~~~~-~~~l~sg~~d~~i~iw~~~-~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~ 99 (347)
-|+.+|-.++|.+ +++|+|||.|+.+++||.. +.|.+.|.||.+.|.++.|.|.-.. ..|++|..|+++++||+..
T Consensus 103 ~He~Pvi~ma~~~~g~LlAtggaD~~v~VWdi~~~~~th~fkG~gGvVssl~F~~~~~~--~lL~sg~~D~~v~vwnl~~ 180 (775)
T KOG0319|consen 103 IHEAPVITMAFDPTGTLLATGGADGRVKVWDIKNGYCTHSFKGHGGVVSSLLFHPHWNR--WLLASGATDGTVRVWNLND 180 (775)
T ss_pred ccCCCeEEEEEcCCCceEEeccccceEEEEEeeCCEEEEEecCCCceEEEEEeCCccch--hheeecCCCceEEEEEccc
Confidence 3999999999874 5799999999999999975 6899999999999999999986543 6789999999999999975
Q ss_pred cccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCC--------------------Cc--c
Q 036314 100 EELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAA--------------------GN--Q 157 (347)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~--------------------~~--~ 157 (347)
.. .++.++..|.+.|++++|++|+..++++|+|..|.|||+.+.... ++ .
T Consensus 181 ~~--------tcl~~~~~H~S~vtsL~~~~d~~~~ls~~RDkvi~vwd~~~~~~l~~lp~ye~~E~vv~l~~~~~~~~~~ 252 (775)
T KOG0319|consen 181 KR--------TCLHTMILHKSAVTSLAFSEDSLELLSVGRDKVIIVWDLVQYKKLKTLPLYESLESVVRLREELGGKGEY 252 (775)
T ss_pred Cc--------hHHHHHHhhhhheeeeeeccCCceEEEeccCcEEEEeehhhhhhhheechhhheeeEEEechhcCCcceE
Confidence 42 145677899999999999999999999999999999997532110 00 0
Q ss_pred ceeee-------------------ccC-C-----------------------Cccc-------------------c----
Q 036314 158 VSIKK-------------------RKG-N-----------------------NQVE-------------------E---- 171 (347)
Q Consensus 158 ~~~~~-------------------~~~-~-----------------------~~~~-------------------~---- 171 (347)
..... +.. . .... +
T Consensus 253 ~~TaG~~g~~~~~d~es~~~~~~~~~~~~~e~~~~~~~~~~~~~l~vtaeQnl~l~d~~~l~i~k~ivG~ndEI~Dm~~l 332 (775)
T KOG0319|consen 253 IITAGGSGVVQYWDSESGKCVYKQRQSDSEEIDHLLAIESMSQLLLVTAEQNLFLYDEDELTIVKQIVGYNDEILDMKFL 332 (775)
T ss_pred EEEecCCceEEEEecccchhhhhhccCCchhhhcceeccccCceEEEEccceEEEEEccccEEehhhcCCchhheeeeec
Confidence 00000 000 0 0000 0
Q ss_pred ----c--------------cccccccccccCCccceEEEE-eCCCCeEEEEecCCcEEEEECCCCcee----eeee-eCe
Q 036314 172 ----P--------------QLEGEAISTLVGHTQCVSSVV-WPQQETIYSASWDHSVRTWDVEMGKDL----SDIF-CGK 227 (347)
Q Consensus 172 ----~--------------~~~~~~~~~~~~h~~~v~~~~-~~~~~~l~s~s~dg~v~vwd~~~~~~~----~~~~-~~~ 227 (347)
. ...+...+.+.||++.|.++. |..+..|+|+|.|+++++|-++.+... .... +.+
T Consensus 333 G~e~~~laVATNs~~lr~y~~~~~~c~ii~GH~e~vlSL~~~~~g~llat~sKD~svilWr~~~~~~~~~~~a~~~gH~~ 412 (775)
T KOG0319|consen 333 GPEESHLAVATNSPELRLYTLPTSYCQIIPGHTEAVLSLDVWSSGDLLATGSKDKSVILWRLNNNCSKSLCVAQANGHTN 412 (775)
T ss_pred CCccceEEEEeCCCceEEEecCCCceEEEeCchhheeeeeecccCcEEEEecCCceEEEEEecCCcchhhhhhhhccccc
Confidence 0 000112235678999999997 677779999999999999987443221 1112 234
Q ss_pred eeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCC--CCCCeE----EecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEE
Q 036314 228 ALNCIDIGGEGSALIAAGGSDPILRIWDPRKPG--TSAPVF----QFSSHNSWISACKWHNKSWFHLISASYDGKVMLWD 301 (347)
Q Consensus 228 ~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~--~~~~~~----~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd 301 (347)
.+.+++++-.+..+|++++.|.++++|++...+ .....+ +...|.+.|++++.+|++. ++||||.|++.+||+
T Consensus 413 svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndk-LiAT~SqDktaKiW~ 491 (775)
T KOG0319|consen 413 SVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDK-LIATGSQDKTAKIWD 491 (775)
T ss_pred ccceeeecccCccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEecCCCc-eEEecccccceeeec
Confidence 677888876677899999999999999997622 111222 3457999999999999985 799999999999999
Q ss_pred cCCCccceeecCCCCeEEEEeecC-CCEEEEccCCceEEEeecc
Q 036314 302 LRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 302 ~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~D~~v~vw~~~ 344 (347)
+.....+.++.||+..|+||.|++ ++.|||+|.|+||+||+.-
T Consensus 492 le~~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is 535 (775)
T KOG0319|consen 492 LEQLRLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSIS 535 (775)
T ss_pred ccCceEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEec
Confidence 998888999999999999999986 6789999999999999853
No 17
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=100.00 E-value=1.8e-36 Score=243.40 Aligned_cols=281 Identities=24% Similarity=0.380 Sum_probs=226.0
Q ss_pred CCCCcCCceeeccCCCC--CEEEEEecCCeEEEEcCCC----eEEEEee-ccCCceEEEEEeecCCCceEEEEEccCCCc
Q 036314 19 EPSLHDDWVSAVDGSNP--GFILTGCYDNLGRVWKAGG----VCTHILE-GHCGAVSSVNIIKSDGLKYVTVATASKDQT 91 (347)
Q Consensus 19 ~~~~h~~~v~~~~~~~~--~~l~sg~~d~~i~iw~~~~----~~~~~l~-~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~ 91 (347)
...+|++.++.+++.++ .+|||+|.|..||+|+..+ .|...+. +|+..|.+++|+|.+ ++|++||.|.+
T Consensus 9 ~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g----~~La~aSFD~t 84 (312)
T KOG0645|consen 9 KLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHG----RYLASASFDAT 84 (312)
T ss_pred eecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCC----cEEEEeeccce
Confidence 46789999999998865 3899999999999999763 4555553 899999999999944 48999999999
Q ss_pred EEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccc
Q 036314 92 LRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEE 171 (347)
Q Consensus 92 v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 171 (347)
+-||.-..++ +++..++.||+..|.|++|+++|.+||++|+|+.|=||.+...+
T Consensus 85 ~~Iw~k~~~e-------fecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~dedd------------------- 138 (312)
T KOG0645|consen 85 VVIWKKEDGE-------FECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDD------------------- 138 (312)
T ss_pred EEEeecCCCc-------eeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCC-------------------
Confidence 9999866543 46788999999999999999999999999999999999886432
Q ss_pred ccccccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCC-C--ceeeeeeeC-eeeEEEEeeCCCCcEEEEec
Q 036314 172 PQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEM-G--KDLSDIFCG-KALNCIDIGGEGSALIAAGG 246 (347)
Q Consensus 172 ~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~-~--~~~~~~~~~-~~~~~~~~~~~~~~~la~~~ 246 (347)
+.++...+..|+..|..+.| |....|+|+|+|++|++|.-.. . .++.++..+ ..+.+++|.+.+ ..+++++
T Consensus 139 ---Efec~aVL~~HtqDVK~V~WHPt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G-~rl~s~s 214 (312)
T KOG0645|consen 139 ---EFECIAVLQEHTQDVKHVIWHPTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIG-SRLVSCS 214 (312)
T ss_pred ---cEEEEeeeccccccccEEEEcCCcceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCCC-ceEEEec
Confidence 23567788999999999999 4567899999999999998763 3 234445433 378899997654 5778999
Q ss_pred CCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCC--ccc-----eeecCCCCeEE
Q 036314 247 SDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTA--WPL-----SVIDSHKDKVL 319 (347)
Q Consensus 247 ~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~--~~~-----~~~~~h~~~v~ 319 (347)
+|++++||-.... . + .-|...+..+.|. ++ .|+|++.|+.|+|+..... ++. +.-..|...|.
T Consensus 215 dD~tv~Iw~~~~~--~-~----~~~sr~~Y~v~W~-~~--~IaS~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVN 284 (312)
T KOG0645|consen 215 DDGTVSIWRLYTD--L-S----GMHSRALYDVPWD-NG--VIASGGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVN 284 (312)
T ss_pred CCcceEeeeeccC--c-c----hhcccceEeeeec-cc--ceEeccCCCEEEEEEecCCCCCchHHHHHhhhcccccccc
Confidence 9999999975421 1 1 1366778889998 44 5999999999999976642 121 12246888999
Q ss_pred EEeecC--CCEEEEccCCceEEEeec
Q 036314 320 CADWWR--GDSVISGGVDSKLCVSSG 343 (347)
Q Consensus 320 ~~~~~~--~~~l~s~s~D~~v~vw~~ 343 (347)
++.|.| .++|++||.||+|++|..
T Consensus 285 sV~w~p~~~~~L~s~~DDG~v~~W~l 310 (312)
T KOG0645|consen 285 SVQWNPKVSNRLASGGDDGIVNFWEL 310 (312)
T ss_pred eEEEcCCCCCceeecCCCceEEEEEe
Confidence 999998 578999999999999973
No 18
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=100.00 E-value=1.3e-36 Score=246.75 Aligned_cols=252 Identities=22% Similarity=0.321 Sum_probs=213.0
Q ss_pred EEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEE
Q 036314 57 THILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCS 136 (347)
Q Consensus 57 ~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~s 136 (347)
.++|+||.++|.++.|+++. ++|+++|.||.+.+||.-+.. ....++--...|..+||+|.|+++|.
T Consensus 48 rr~LkGH~~Ki~~~~ws~Ds----r~ivSaSqDGklIvWDs~Ttn---------K~haipl~s~WVMtCA~sPSg~~VAc 114 (343)
T KOG0286|consen 48 RRTLKGHLNKIYAMDWSTDS----RRIVSASQDGKLIVWDSFTTN---------KVHAIPLPSSWVMTCAYSPSGNFVAC 114 (343)
T ss_pred EEEecccccceeeeEecCCc----CeEEeeccCCeEEEEEccccc---------ceeEEecCceeEEEEEECCCCCeEEe
Confidence 47899999999999999844 579999999999999975432 12234455788999999999999999
Q ss_pred eeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeCCCCeEEEEecCCcEEEEECCC
Q 036314 137 GSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEM 216 (347)
Q Consensus 137 gs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~dg~v~vwd~~~ 216 (347)
|+.|....||++...+..+.. ...+.+.+|+..+.+..|.++..|+++|.|.++.+||+++
T Consensus 115 GGLdN~Csiy~ls~~d~~g~~-------------------~v~r~l~gHtgylScC~f~dD~~ilT~SGD~TCalWDie~ 175 (343)
T KOG0286|consen 115 GGLDNKCSIYPLSTRDAEGNV-------------------RVSRELAGHTGYLSCCRFLDDNHILTGSGDMTCALWDIET 175 (343)
T ss_pred cCcCceeEEEecccccccccc-------------------eeeeeecCccceeEEEEEcCCCceEecCCCceEEEEEccc
Confidence 999999999998754322111 1245789999999999998888999999999999999999
Q ss_pred CceeeeeeeC-eeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCC
Q 036314 217 GKDLSDIFCG-KALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDG 295 (347)
Q Consensus 217 ~~~~~~~~~~-~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~ 295 (347)
++.+..+..+ ..+.++++.|.+++.+++|+-|...+|||+|.+ ...++|.+|.+-|+++.|.|+|. -++|||.|+
T Consensus 176 g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~---~c~qtF~ghesDINsv~ffP~G~-afatGSDD~ 251 (343)
T KOG0286|consen 176 GQQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSG---QCVQTFEGHESDINSVRFFPSGD-AFATGSDDA 251 (343)
T ss_pred ceEEEEecCCcccEEEEecCCCCCCeEEecccccceeeeeccCc---ceeEeecccccccceEEEccCCC-eeeecCCCc
Confidence 9988777644 368899998868889999999999999999964 45789999999999999999996 599999999
Q ss_pred cEEEEEcCCCccceeecC--CCCeEEEEeec-CCCEEEEccCCceEEEeecc
Q 036314 296 KVMLWDLRTAWPLSVIDS--HKDKVLCADWW-RGDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 296 ~i~lwd~~~~~~~~~~~~--h~~~v~~~~~~-~~~~l~s~s~D~~v~vw~~~ 344 (347)
++|+||+|..+++..++. -...|.+++|| .|++|.+|..|.++.||+.-
T Consensus 252 tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~SGRlLfagy~d~~c~vWDtl 303 (343)
T KOG0286|consen 252 TCRLYDLRADQELAVYSHDSIICGITSVAFSKSGRLLFAGYDDFTCNVWDTL 303 (343)
T ss_pred eeEEEeecCCcEEeeeccCcccCCceeEEEcccccEEEeeecCCceeEeecc
Confidence 999999999888887752 22468999998 58889999999999999964
No 19
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=100.00 E-value=5.6e-37 Score=263.10 Aligned_cols=277 Identities=20% Similarity=0.356 Sum_probs=233.6
Q ss_pred CcCCceeeccCC-CCCEEEEEecCCeEEEEcCCCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEecccc
Q 036314 22 LHDDWVSAVDGS-NPGFILTGCYDNLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAE 100 (347)
Q Consensus 22 ~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~ 100 (347)
.-+..|++++.+ +|.+||+|+.||.+|+|+..|....+|..|.++|.++.|...+ .+|++++.|+++.+||..++
T Consensus 233 ~~nkdVT~L~Wn~~G~~LatG~~~G~~riw~~~G~l~~tl~~HkgPI~slKWnk~G----~yilS~~vD~ttilwd~~~g 308 (524)
T KOG0273|consen 233 PSNKDVTSLDWNNDGTLLATGSEDGEARIWNKDGNLISTLGQHKGPIFSLKWNKKG----TYILSGGVDGTTILWDAHTG 308 (524)
T ss_pred CccCCcceEEecCCCCeEEEeecCcEEEEEecCchhhhhhhccCCceEEEEEcCCC----CEEEeccCCccEEEEeccCc
Confidence 345789999987 6789999999999999999998888999999999999998744 57999999999999998776
Q ss_pred ccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccc
Q 036314 101 ELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAIS 180 (347)
Q Consensus 101 ~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (347)
+ ..+.+.-|+.+-..|.|-.+ .-+++++.|+.|+++.+... .+..
T Consensus 309 ~---------~~q~f~~~s~~~lDVdW~~~-~~F~ts~td~~i~V~kv~~~-------------------------~P~~ 353 (524)
T KOG0273|consen 309 T---------VKQQFEFHSAPALDVDWQSN-DEFATSSTDGCIHVCKVGED-------------------------RPVK 353 (524)
T ss_pred e---------EEEeeeeccCCccceEEecC-ceEeecCCCceEEEEEecCC-------------------------Ccce
Confidence 5 34456668888677887644 56889999999999987642 3466
Q ss_pred cccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeeeeC-eeeEEEEeeCC--------CCcEEEEecCCCc
Q 036314 181 TLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCG-KALNCIDIGGE--------GSALIAAGGSDPI 250 (347)
Q Consensus 181 ~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~-~~~~~~~~~~~--------~~~~la~~~~d~~ 250 (347)
++.+|...|.++.| |.+..|+|+|.|++++||..........+..+ +.+..+.++|. .+..+++++.|++
T Consensus 354 t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dst 433 (524)
T KOG0273|consen 354 TFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDST 433 (524)
T ss_pred eeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCcchhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCe
Confidence 88899999999999 56788999999999999998777766666533 35556655543 4457889999999
Q ss_pred EEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeec-CCCEE
Q 036314 251 LRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWW-RGDSV 329 (347)
Q Consensus 251 i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~-~~~~l 329 (347)
|++||+.. ..+++.|..|...|.+++|+|++. +||+|+.||.|.+|+.++++..+.+.+ .+.|..+.|+ .|++|
T Consensus 434 V~lwdv~~---gv~i~~f~kH~~pVysvafS~~g~-ylAsGs~dg~V~iws~~~~~l~~s~~~-~~~Ifel~Wn~~G~kl 508 (524)
T KOG0273|consen 434 VKLWDVES---GVPIHTLMKHQEPVYSVAFSPNGR-YLASGSLDGCVHIWSTKTGKLVKSYQG-TGGIFELCWNAAGDKL 508 (524)
T ss_pred EEEEEccC---CceeEeeccCCCceEEEEecCCCc-EEEecCCCCeeEeccccchheeEeecC-CCeEEEEEEcCCCCEE
Confidence 99999875 456899999999999999999996 599999999999999999998888876 5679999997 78999
Q ss_pred EEccCCceEEEee
Q 036314 330 ISGGVDSKLCVSS 342 (347)
Q Consensus 330 ~s~s~D~~v~vw~ 342 (347)
..+-.|+.++|-+
T Consensus 509 ~~~~sd~~vcvld 521 (524)
T KOG0273|consen 509 GACASDGSVCVLD 521 (524)
T ss_pred EEEecCCCceEEE
Confidence 8888899999865
No 20
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=3.1e-37 Score=260.75 Aligned_cols=288 Identities=22% Similarity=0.253 Sum_probs=231.5
Q ss_pred CCCcCCCCCcCCceeeccCC-CCCEEEEEecCCeEEEEcCC--C--eEEEEeeccCCceEEEEEeecCCCceEEEEEccC
Q 036314 14 PQKEEEPSLHDDWVSAVDGS-NPGFILTGCYDNLGRVWKAG--G--VCTHILEGHCGAVSSVNIIKSDGLKYVTVATASK 88 (347)
Q Consensus 14 ~~~~~~~~~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~--~--~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~ 88 (347)
.|+......|++.|+-+.|| +|.||||++.|.++.+|+.. + +..+++.||..+|.-+.|+|++. +|++++.
T Consensus 214 ~qt~qil~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdr----yLlaCg~ 289 (519)
T KOG0293|consen 214 SQTWQILQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDR----YLLACGF 289 (519)
T ss_pred chhhhhHhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCC----eEEecCc
Confidence 34455677899999999999 57799999999999999752 2 45788999999999999999654 6899999
Q ss_pred CCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCc
Q 036314 89 DQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQ 168 (347)
Q Consensus 89 Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~ 168 (347)
|..+++||+.++++.... -.+|...+.+++|.|||..+++|+.|++|..||+...
T Consensus 290 ~e~~~lwDv~tgd~~~~y--------~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlDgn----------------- 344 (519)
T KOG0293|consen 290 DEVLSLWDVDTGDLRHLY--------PSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLDGN----------------- 344 (519)
T ss_pred hHheeeccCCcchhhhhc--------ccCcCCCcceeEEccCCceeEecCCCCcEEEecCCcc-----------------
Confidence 999999999988653211 1235578999999999999999999999999998632
Q ss_pred cccccccccccccccCCc-cceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEec
Q 036314 169 VEEPQLEGEAISTLVGHT-QCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGG 246 (347)
Q Consensus 169 ~~~~~~~~~~~~~~~~h~-~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~ 246 (347)
.+..+++-. ..|.+++. ++|+++++...|..+++++.++......+....+++.+.++. ++.++.+.-
T Consensus 345 ---------~~~~W~gvr~~~v~dlait~Dgk~vl~v~~d~~i~l~~~e~~~dr~lise~~~its~~iS~-d~k~~LvnL 414 (519)
T KOG0293|consen 345 ---------ILGNWEGVRDPKVHDLAITYDGKYVLLVTVDKKIRLYNREARVDRGLISEEQPITSFSISK-DGKLALVNL 414 (519)
T ss_pred ---------hhhcccccccceeEEEEEcCCCcEEEEEecccceeeechhhhhhhccccccCceeEEEEcC-CCcEEEEEc
Confidence 122233322 45778876 689999999999999999988766655566677888888865 456777888
Q ss_pred CCCcEEEEeCCCCCCCCCeEEecCCCCC--eeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeec
Q 036314 247 SDPILRIWDPRKPGTSAPVFQFSSHNSW--ISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWW 324 (347)
Q Consensus 247 ~d~~i~iwd~~~~~~~~~~~~~~~h~~~--v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~ 324 (347)
.+..+++||+.. ...+..+.||... +-.-.|-..+..++||||+|+.|.||+.++++++.++.||...|.||+|+
T Consensus 415 ~~qei~LWDl~e---~~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~sgkll~~LsGHs~~vNcVswN 491 (519)
T KOG0293|consen 415 QDQEIHLWDLEE---NKLVRKYFGHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRISGKLLAVLSGHSKTVNCVSWN 491 (519)
T ss_pred ccCeeEEeecch---hhHHHHhhcccccceEEEeccCCCCcceEEecCCCceEEEEEccCCceeEeecCCcceeeEEecC
Confidence 899999999973 2335667788763 33334555454689999999999999999999999999999999999998
Q ss_pred CCC--EEEEccCCceEEEeec
Q 036314 325 RGD--SVISGGVDSKLCVSSG 343 (347)
Q Consensus 325 ~~~--~l~s~s~D~~v~vw~~ 343 (347)
|-+ .|||||.||+||||.-
T Consensus 492 P~~p~m~ASasDDgtIRIWg~ 512 (519)
T KOG0293|consen 492 PADPEMFASASDDGTIRIWGP 512 (519)
T ss_pred CCCHHHhhccCCCCeEEEecC
Confidence 744 6999999999999964
No 21
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=7.3e-37 Score=275.12 Aligned_cols=295 Identities=23% Similarity=0.333 Sum_probs=243.3
Q ss_pred CCCcCCceeeccCC--CCCEEEEEecCCeEEEEcCCCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEec
Q 036314 20 PSLHDDWVSAVDGS--NPGFILTGCYDNLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKF 97 (347)
Q Consensus 20 ~~~h~~~v~~~~~~--~~~~l~sg~~d~~i~iw~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~ 97 (347)
..|..+.|..++|- .+++||.++.-+.+|+++..+..-..+.||+..|.+++...+ +..|+|||.|+++++|.+
T Consensus 319 ivG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~c~ii~GH~e~vlSL~~~~~----g~llat~sKD~svilWr~ 394 (775)
T KOG0319|consen 319 IVGYNDEILDMKFLGPEESHLAVATNSPELRLYTLPTSYCQIIPGHTEAVLSLDVWSS----GDLLATGSKDKSVILWRL 394 (775)
T ss_pred hcCCchhheeeeecCCccceEEEEeCCCceEEEecCCCceEEEeCchhheeeeeeccc----CcEEEEecCCceEEEEEe
Confidence 45888899999976 346899999999999999876555699999999999995442 247999999999999998
Q ss_pred cccccccCccccceeeeeeccccceEEEEEeCCC-CEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccc
Q 036314 98 DAEELVNHPKKIRSFKILRGHKASVHSIAAETSG-NMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEG 176 (347)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~-~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (347)
+.+. .+..++....+|++.|.+|+++.-+ .+|+++|.|+++++|++........+. ..
T Consensus 395 ~~~~-----~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~----------------~~ 453 (775)
T KOG0319|consen 395 NNNC-----SKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPI----------------VL 453 (775)
T ss_pred cCCc-----chhhhhhhhcccccccceeeecccCccEEEEecCCceEEEecCCCcccccccc----------------ee
Confidence 5432 1223555678999999999997766 689999999999999987632211110 11
Q ss_pred cccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeeeeC-eeeEEEEeeCCCCcEEEEecCCCcEEEE
Q 036314 177 EAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCG-KALNCIDIGGEGSALIAAGGSDPILRIW 254 (347)
Q Consensus 177 ~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~la~~~~d~~i~iw 254 (347)
++..+...|.+.|++++. |++..+++||.|++.+||+++.......+..+ ..+.|+.|++.+ +++|+++.|.+|+||
T Consensus 454 ~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~~l~~vLsGH~RGvw~V~Fs~~d-q~laT~SgD~TvKIW 532 (775)
T KOG0319|consen 454 TCRYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQLRLLGVLSGHTRGVWCVSFSKND-QLLATCSGDKTVKIW 532 (775)
T ss_pred hhhHHHHhhcccccceEecCCCceEEecccccceeeecccCceEEEEeeCCccceEEEEecccc-ceeEeccCCceEEEE
Confidence 223355679999999998 56778999999999999999987777777654 479999997765 589999999999999
Q ss_pred eCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeecC-CCEEEEcc
Q 036314 255 DPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGG 333 (347)
Q Consensus 255 d~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~s 333 (347)
.+.. -..+.+|+||...|..+.|-.++. +|+||+.||-+|||++++++++.++.+|.++||++.-++ +..++||+
T Consensus 533 ~is~---fSClkT~eGH~~aVlra~F~~~~~-qliS~~adGliKlWnikt~eC~~tlD~H~DrvWaL~~~~~~~~~~tgg 608 (775)
T KOG0319|consen 533 SIST---FSCLKTFEGHTSAVLRASFIRNGK-QLISAGADGLIKLWNIKTNECEMTLDAHNDRVWALSVSPLLDMFVTGG 608 (775)
T ss_pred Eecc---ceeeeeecCccceeEeeeeeeCCc-EEEeccCCCcEEEEeccchhhhhhhhhccceeEEEeecCccceeEecC
Confidence 9974 345889999999999999998875 699999999999999999999999999999999999875 66799999
Q ss_pred CCceEEEeecc
Q 036314 334 VDSKLCVSSGV 344 (347)
Q Consensus 334 ~D~~v~vw~~~ 344 (347)
.||.|.+|-=+
T Consensus 609 ~Dg~i~~wkD~ 619 (775)
T KOG0319|consen 609 GDGRIIFWKDV 619 (775)
T ss_pred CCeEEEEeecC
Confidence 99999999654
No 22
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=100.00 E-value=5.6e-37 Score=278.17 Aligned_cols=257 Identities=21% Similarity=0.377 Sum_probs=213.3
Q ss_pred CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccc---------c-------------Cccccce
Q 036314 54 GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELV---------N-------------HPKKIRS 111 (347)
Q Consensus 54 ~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~---------~-------------~~~~~~~ 111 (347)
..|.-++..-...++|..|+++. .+||.|-.|..|++|.+...++. . .......
T Consensus 368 Sic~YT~~nt~~~v~ca~fSdds----smlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~ 443 (707)
T KOG0263|consen 368 SICMYTFHNTYQGVTCAEFSDDS----SMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGT 443 (707)
T ss_pred cEEEEEEEEcCCcceeEeecCCc----chhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCce
Confidence 34555555445568999998743 47999999999999998743211 0 1112233
Q ss_pred eeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEE
Q 036314 112 FKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSS 191 (347)
Q Consensus 112 ~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 191 (347)
.+++.||++||..+.|+|+.++|+|+|.|+++|+|.+.+. +++-.++||..+|+.
T Consensus 444 ~~~L~GH~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~-------------------------s~~V~y~GH~~PVwd 498 (707)
T KOG0263|consen 444 SRTLYGHSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTW-------------------------SCLVIYKGHLAPVWD 498 (707)
T ss_pred eEEeecCCCceeeeeecccccceeeccCCcceeeeecccc-------------------------eeEEEecCCCcceee
Confidence 4568999999999999999999999999999999998764 334567899999999
Q ss_pred EEe-CCCCeEEEEecCCcEEEEECCCCceeeeeeeC-eeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEec
Q 036314 192 VVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCG-KALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFS 269 (347)
Q Consensus 192 ~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~ 269 (347)
+.| |.|-+++|+|.|++-++|......+++.+.++ ..+.|+.|+|+ .+++|+|+.|.+||+||...+. .+..|.
T Consensus 499 V~F~P~GyYFatas~D~tArLWs~d~~~PlRifaghlsDV~cv~FHPN-s~Y~aTGSsD~tVRlWDv~~G~---~VRiF~ 574 (707)
T KOG0263|consen 499 VQFAPRGYYFATASHDQTARLWSTDHNKPLRIFAGHLSDVDCVSFHPN-SNYVATGSSDRTVRLWDVSTGN---SVRIFT 574 (707)
T ss_pred EEecCCceEEEecCCCceeeeeecccCCchhhhcccccccceEEECCc-ccccccCCCCceEEEEEcCCCc---EEEEec
Confidence 998 56778999999999999998776666655433 46899999875 5689999999999999987543 367889
Q ss_pred CCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeec-CCCEEEEccCCceEEEeecc
Q 036314 270 SHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWW-RGDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 270 ~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~-~~~~l~s~s~D~~v~vw~~~ 344 (347)
||.+.|.+++|||+|. +||+|+.|+.|++||+..+..+..+.+|++.|.++.|+ +|..||+||.|.+|++|+.-
T Consensus 575 GH~~~V~al~~Sp~Gr-~LaSg~ed~~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~ 649 (707)
T KOG0263|consen 575 GHKGPVTALAFSPCGR-YLASGDEDGLIKIWDLANGSLVKQLKGHTGTIYSLSFSRDGNVLASGGADNSVRLWDLT 649 (707)
T ss_pred CCCCceEEEEEcCCCc-eEeecccCCcEEEEEcCCCcchhhhhcccCceeEEEEecCCCEEEecCCCCeEEEEEch
Confidence 9999999999999986 59999999999999999999999999999999999998 68899999999999999854
No 23
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=100.00 E-value=8.3e-37 Score=262.08 Aligned_cols=280 Identities=23% Similarity=0.388 Sum_probs=230.6
Q ss_pred CcCCceeeccCC--CCCEEEEEecCCeEEEEcCCC---eEEE--Eee------cc----CCceEEEEEeecCCCceEEEE
Q 036314 22 LHDDWVSAVDGS--NPGFILTGCYDNLGRVWKAGG---VCTH--ILE------GH----CGAVSSVNIIKSDGLKYVTVA 84 (347)
Q Consensus 22 ~h~~~v~~~~~~--~~~~l~sg~~d~~i~iw~~~~---~~~~--~l~------~h----~~~V~~v~~~~~~~~~~~~l~ 84 (347)
.|+..|.+.+.. .++++++|+.|-+.|+|++.. .+.. .|+ ++ ...|++++|..++ ..||
T Consensus 176 ~~~~~V~~~~WnP~~~~llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~G----~~La 251 (524)
T KOG0273|consen 176 RHESEVFICAWNPLRDGLLASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNNDG----TLLA 251 (524)
T ss_pred cCCCceEEEecCchhhhhhhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecCCC----CeEE
Confidence 488888888865 356899999999999999642 1111 111 22 2579999998744 4799
Q ss_pred EccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeecc
Q 036314 85 TASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRK 164 (347)
Q Consensus 85 s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~ 164 (347)
+|+.||.+|+|+.+.+ .+.+|.-|++||.++.|+.+|++|++++.|+++.+||..++
T Consensus 252 tG~~~G~~riw~~~G~----------l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g------------- 308 (524)
T KOG0273|consen 252 TGSEDGEARIWNKDGN----------LISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTG------------- 308 (524)
T ss_pred EeecCcEEEEEecCch----------hhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCc-------------
Confidence 9999999999998764 23467789999999999999999999999999999997653
Q ss_pred CCCccccccccccccccccCCccceEEEEeCCCCeEEEEecCCcEEEEECCCCceeeeeee-CeeeEEEEeeCCCCcEEE
Q 036314 165 GNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFC-GKALNCIDIGGEGSALIA 243 (347)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~la 243 (347)
+..+.+..|..+-..+.|-+...+++.+.|+.|+|+-+-...++.++.. +.++.++.+.|. +.+|+
T Consensus 309 ------------~~~q~f~~~s~~~lDVdW~~~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~t-g~LLa 375 (524)
T KOG0273|consen 309 ------------TVKQQFEFHSAPALDVDWQSNDEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPT-GSLLA 375 (524)
T ss_pred ------------eEEEeeeeccCCccceEEecCceEeecCCCceEEEEEecCCCcceeeecccCceEEEEECCC-CceEE
Confidence 2233445566665667887778899999999999999877777877765 457999999654 56899
Q ss_pred EecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCC--------eEEEEEeCCCcEEEEEcCCCccceeecCCC
Q 036314 244 AGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSW--------FHLISASYDGKVMLWDLRTAWPLSVIDSHK 315 (347)
Q Consensus 244 ~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~--------~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~ 315 (347)
++++|++++||.+... .....+.+|...|..+.|+|.++ ..|++++.|++|++||+..+.++.+|..|+
T Consensus 376 S~SdD~TlkiWs~~~~---~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~ 452 (524)
T KOG0273|consen 376 SCSDDGTLKIWSMGQS---NSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMKHQ 452 (524)
T ss_pred EecCCCeeEeeecCCC---cchhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeeccCC
Confidence 9999999999997643 23567789999999999999763 469999999999999999999999999999
Q ss_pred CeEEEEeecC-CCEEEEccCCceEEEeecc
Q 036314 316 DKVLCADWWR-GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 316 ~~v~~~~~~~-~~~l~s~s~D~~v~vw~~~ 344 (347)
++|++++|+| |+++|+|+.||.|.+|+..
T Consensus 453 ~pVysvafS~~g~ylAsGs~dg~V~iws~~ 482 (524)
T KOG0273|consen 453 EPVYSVAFSPNGRYLASGSLDGCVHIWSTK 482 (524)
T ss_pred CceEEEEecCCCcEEEecCCCCeeEecccc
Confidence 9999999985 8899999999999999976
No 24
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=3.1e-36 Score=237.66 Aligned_cols=281 Identities=23% Similarity=0.346 Sum_probs=226.5
Q ss_pred CCCCCcCCceeeccCC-CCCEEEEEecCCeEEEEcC-CCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEE
Q 036314 18 EEPSLHDDWVSAVDGS-NPGFILTGCYDNLGRVWKA-GGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLW 95 (347)
Q Consensus 18 ~~~~~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~-~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~w 95 (347)
..+..|.++|.+++|. +|+|.+|+|.|.++|+||+ .|.+++++.||..+|..++.+.++. .+++|+.|..+.+|
T Consensus 11 ~~l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dns----kf~s~GgDk~v~vw 86 (307)
T KOG0316|consen 11 SILDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNS----KFASCGGDKAVQVW 86 (307)
T ss_pred eeecccccceEEEEEccCCCEEEEcCCCceEEeecccccceeeeecCCCceeeecccccccc----ccccCCCCceEEEE
Confidence 3567899999999998 7889999999999999996 6899999999999999998877443 58999999999999
Q ss_pred eccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccc
Q 036314 96 KFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLE 175 (347)
Q Consensus 96 d~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (347)
|+++++ ..+.|++|.+.|+.++|+.+...++|||.|.++++||.++...
T Consensus 87 DV~TGk---------v~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~---------------------- 135 (307)
T KOG0316|consen 87 DVNTGK---------VDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSF---------------------- 135 (307)
T ss_pred EcccCe---------eeeecccccceeeEEEecCcceEEEeccccceeEEEEcccCCC----------------------
Confidence 999886 4567899999999999999999999999999999999876432
Q ss_pred ccccccccCCccceEEEEeCCCCeEEEEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEe
Q 036314 176 GEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWD 255 (347)
Q Consensus 176 ~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd 255 (347)
++++.+....+.|.++.. .+..|+.||.||+++.||++.|..... ..+.+++|+.++++ ++..++++.|+++++.|
T Consensus 136 -ePiQildea~D~V~Si~v-~~heIvaGS~DGtvRtydiR~G~l~sD-y~g~pit~vs~s~d-~nc~La~~l~stlrLlD 211 (307)
T KOG0316|consen 136 -EPIQILDEAKDGVSSIDV-AEHEIVAGSVDGTVRTYDIRKGTLSSD-YFGHPITSVSFSKD-GNCSLASSLDSTLRLLD 211 (307)
T ss_pred -CccchhhhhcCceeEEEe-cccEEEeeccCCcEEEEEeecceeehh-hcCCcceeEEecCC-CCEEEEeeccceeeecc
Confidence 345566666677887765 346788999999999999999875443 34678999999765 55677788999999999
Q ss_pred CCCCCCCCCeEEecCCCCC--eeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCe-EEEEeecCC-CEEEE
Q 036314 256 PRKPGTSAPVFQFSSHNSW--ISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDK-VLCADWWRG-DSVIS 331 (347)
Q Consensus 256 ~~~~~~~~~~~~~~~h~~~--v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~-v~~~~~~~~-~~l~s 331 (347)
-.. .+.+..+.||.+. -..+.++... .++++||+||.|.+||+..+..+..+..|... |..+.++|. ..|++
T Consensus 212 k~t---GklL~sYkGhkn~eykldc~l~qsd-thV~sgSEDG~Vy~wdLvd~~~~sk~~~~~~v~v~dl~~hp~~~~f~~ 287 (307)
T KOG0316|consen 212 KET---GKLLKSYKGHKNMEYKLDCCLNQSD-THVFSGSEDGKVYFWDLVDETQISKLSVVSTVIVTDLSCHPTMDDFIT 287 (307)
T ss_pred cch---hHHHHHhcccccceeeeeeeecccc-eeEEeccCCceEEEEEeccceeeeeeccCCceeEEeeecccCccceeE
Confidence 653 3346778888763 4455565443 57999999999999999998888888877766 688999873 34555
Q ss_pred ccCCceEEEee
Q 036314 332 GGVDSKLCVSS 342 (347)
Q Consensus 332 ~s~D~~v~vw~ 342 (347)
+. ++.+..|-
T Consensus 288 A~-~~~~~~~~ 297 (307)
T KOG0316|consen 288 AT-GHGDLFWY 297 (307)
T ss_pred ec-CCceecee
Confidence 44 34445554
No 25
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=100.00 E-value=1.3e-35 Score=273.88 Aligned_cols=281 Identities=26% Similarity=0.394 Sum_probs=232.6
Q ss_pred CcCCceeeccCC-CCCEEEEEecCCeEEEEcCC-Ce--EEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEec
Q 036314 22 LHDDWVSAVDGS-NPGFILTGCYDNLGRVWKAG-GV--CTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKF 97 (347)
Q Consensus 22 ~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~-~~--~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~ 97 (347)
.|...|++++|+ ++.+|++++.|+++++|+.. +. ..+.+.+|...|..++|++++ ..+++++.|++||+||+
T Consensus 157 ~~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~----~~l~s~s~D~tiriwd~ 232 (456)
T KOG0266|consen 157 HECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDG----SYLLSGSDDKTLRIWDL 232 (456)
T ss_pred cccCceEEEEEcCCCCeEEEccCCCcEEEeecccccchhhccccccccceeeeEECCCC----cEEEEecCCceEEEeec
Confidence 347889999998 56799999999999999973 34 566778999999999999954 47999999999999998
Q ss_pred cccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccccc
Q 036314 98 DAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGE 177 (347)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (347)
... ...++++.+|...|++++|+|+|++++||+.|++|+|||++++ +
T Consensus 233 ~~~--------~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~-------------------------~ 279 (456)
T KOG0266|consen 233 KDD--------GRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTG-------------------------E 279 (456)
T ss_pred cCC--------CeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCC-------------------------e
Confidence 322 2467789999999999999999999999999999999999753 4
Q ss_pred ccccccCCccceEEEEeC-CCCeEEEEecCCcEEEEECCCCc--eeeeeeeC--e-eeEEEEeeCCCCcEEEEecCCCcE
Q 036314 178 AISTLVGHTQCVSSVVWP-QQETIYSASWDHSVRTWDVEMGK--DLSDIFCG--K-ALNCIDIGGEGSALIAAGGSDPIL 251 (347)
Q Consensus 178 ~~~~~~~h~~~v~~~~~~-~~~~l~s~s~dg~v~vwd~~~~~--~~~~~~~~--~-~~~~~~~~~~~~~~la~~~~d~~i 251 (347)
+.+.+.+|.+.|.+++|+ ++..|++++.|+.|++||+.++. +...+... . +++++.++++ +.+++++..|+.+
T Consensus 280 ~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~-~~~ll~~~~d~~~ 358 (456)
T KOG0266|consen 280 CVRKLKGHSDGISGLAFSPDGNLLVSASYDGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPN-GKYLLSASLDRTL 358 (456)
T ss_pred EEEeeeccCCceEEEEECCCCCEEEEcCCCccEEEEECCCCceeeeecccCCCCCCceeEEEECCC-CcEEEEecCCCeE
Confidence 577889999999999995 77889999999999999999988 33444322 2 5788899765 4577889999999
Q ss_pred EEEeCCCCCCCCCeEEecCCCCCe---eEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCC-CCeEEEEeecC-C
Q 036314 252 RIWDPRKPGTSAPVFQFSSHNSWI---SACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSH-KDKVLCADWWR-G 326 (347)
Q Consensus 252 ~iwd~~~~~~~~~~~~~~~h~~~v---~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h-~~~v~~~~~~~-~ 326 (347)
++||++.. .....+.+|...+ .+...++.+ .++++|+.|+.|.+||+.++..+..+++| ...+..+.|++ .
T Consensus 359 ~~w~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~sg~~d~~v~~~~~~s~~~~~~l~~h~~~~~~~~~~~~~~ 434 (456)
T KOG0266|consen 359 KLWDLRSG---KSVGTYTGHSNLVRCIFSPTLSTGG-KLIYSGSEDGSVYVWDSSSGGILQRLEGHSKAAVSDLSSHPTE 434 (456)
T ss_pred EEEEccCC---cceeeecccCCcceeEecccccCCC-CeEEEEeCCceEEEEeCCccchhhhhcCCCCCceeccccCCCc
Confidence 99999853 2356677787753 223334555 46999999999999999998889999999 88999999986 5
Q ss_pred CEEEEcc--CCceEEEeecc
Q 036314 327 DSVISGG--VDSKLCVSSGV 344 (347)
Q Consensus 327 ~~l~s~s--~D~~v~vw~~~ 344 (347)
+.+++++ .|+.+++|.-.
T Consensus 435 ~~~~s~s~~~d~~~~~w~~~ 454 (456)
T KOG0266|consen 435 NLIASSSFEGDGLIRLWKYD 454 (456)
T ss_pred CeeeecCcCCCceEEEecCC
Confidence 5788888 79999999753
No 26
>PLN00181 protein SPA1-RELATED; Provisional
Probab=100.00 E-value=9.9e-35 Score=286.48 Aligned_cols=283 Identities=16% Similarity=0.248 Sum_probs=219.9
Q ss_pred CCCcCCceeeccCC-CCCEEEEEecCCeEEEEcCCC-----e----EEEEeeccCCceEEEEEeecCCCceEEEEEccCC
Q 036314 20 PSLHDDWVSAVDGS-NPGFILTGCYDNLGRVWKAGG-----V----CTHILEGHCGAVSSVNIIKSDGLKYVTVATASKD 89 (347)
Q Consensus 20 ~~~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~~-----~----~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~D 89 (347)
...|.+.|++++|+ ++.+|||||.|++|++|+... . ....+.+ ...|.++.|.+..+ ..|++++.|
T Consensus 479 ~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~~-~~~v~~l~~~~~~~---~~las~~~D 554 (793)
T PLN00181 479 LLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELAS-RSKLSGICWNSYIK---SQVASSNFE 554 (793)
T ss_pred ccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEecc-cCceeeEEeccCCC---CEEEEEeCC
Confidence 44699999999998 567999999999999998632 1 1223333 45789999987533 369999999
Q ss_pred CcEEEEeccccccccCccccceeeeeeccccceEEEEEeC-CCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCc
Q 036314 90 QTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAET-SGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQ 168 (347)
Q Consensus 90 g~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~-~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~ 168 (347)
|+|++||+.+++ .+..+.+|.+.|.+++|+| ++.+|+||+.|++|++||+.+..
T Consensus 555 g~v~lWd~~~~~---------~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~---------------- 609 (793)
T PLN00181 555 GVVQVWDVARSQ---------LVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGV---------------- 609 (793)
T ss_pred CeEEEEECCCCe---------EEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCc----------------
Confidence 999999987653 4456789999999999996 78999999999999999987532
Q ss_pred cccccccccccccccCCccceEEEEe-C-CCCeEEEEecCCcEEEEECCCCc-eeeeee-eCeeeEEEEeeCCCCcEEEE
Q 036314 169 VEEPQLEGEAISTLVGHTQCVSSVVW-P-QQETIYSASWDHSVRTWDVEMGK-DLSDIF-CGKALNCIDIGGEGSALIAA 244 (347)
Q Consensus 169 ~~~~~~~~~~~~~~~~h~~~v~~~~~-~-~~~~l~s~s~dg~v~vwd~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~la~ 244 (347)
.+..+..+ ..+.++.| + ++..|++|+.|+.|++||++.+. .+..+. +...+.++.|. ++..+++
T Consensus 610 ---------~~~~~~~~-~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~--~~~~lvs 677 (793)
T PLN00181 610 ---------SIGTIKTK-ANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFV--DSSTLVS 677 (793)
T ss_pred ---------EEEEEecC-CCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEecCCCCCEEEEEEe--CCCEEEE
Confidence 12233333 46778887 3 57889999999999999998765 333343 23467888885 3457889
Q ss_pred ecCCCcEEEEeCCCCC---CCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCcccee-----------
Q 036314 245 GGSDPILRIWDPRKPG---TSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSV----------- 310 (347)
Q Consensus 245 ~~~d~~i~iwd~~~~~---~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~----------- 310 (347)
++.|++|++||++... ...++..+.+|...+..+.|+|++. +|++|+.|++|++|+.....++..
T Consensus 678 ~s~D~~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~-~lasgs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~ 756 (793)
T PLN00181 678 SSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDG-YIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSG 756 (793)
T ss_pred EECCCEEEEEeCCCCccccCCcceEEEcCCCCCeeEEEEcCCCC-EEEEEeCCCEEEEEECCCCCceEEEecccCCcccc
Confidence 9999999999987431 1235678899999999999999986 699999999999999876543322
Q ss_pred --ecCCCCeEEEEeecC-CCEEEEccCCceEEEeecc
Q 036314 311 --IDSHKDKVLCADWWR-GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 311 --~~~h~~~v~~~~~~~-~~~l~s~s~D~~v~vw~~~ 344 (347)
...|...|.+++|++ +..|++|+.||+|+||+-+
T Consensus 757 ~~~~~~~~~V~~v~ws~~~~~lva~~~dG~I~i~~~~ 793 (793)
T PLN00181 757 LEVDDASQFISSVCWRGQSSTLVAANSTGNIKILEMV 793 (793)
T ss_pred cccCCCCcEEEEEEEcCCCCeEEEecCCCcEEEEecC
Confidence 133566799999975 7789999999999999853
No 27
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=100.00 E-value=3e-35 Score=239.62 Aligned_cols=280 Identities=22% Similarity=0.408 Sum_probs=226.7
Q ss_pred CCCcCCceeeccCCC-CCEEEEEecCCeEEEEcCCCeE--EEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEe
Q 036314 20 PSLHDDWVSAVDGSN-PGFILTGCYDNLGRVWKAGGVC--THILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWK 96 (347)
Q Consensus 20 ~~~h~~~v~~~~~~~-~~~l~sg~~d~~i~iw~~~~~~--~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd 96 (347)
..+|++.|..+.|++ |.+|||||.|..|-+|+..+.| ...+.+|.+.|..+.|.++++ .|++++.|.+|+.||
T Consensus 43 l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s----~i~S~gtDk~v~~wD 118 (338)
T KOG0265|consen 43 LPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGS----HILSCGTDKTVRGWD 118 (338)
T ss_pred cCCCcceEEEEEECCCCCeEeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCC----EEEEecCCceEEEEe
Confidence 448999999999985 5699999999999999976654 467889999999999998554 799999999999999
Q ss_pred ccccccccCccccceeeeeeccccceEEEEEeCCC-CEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccc
Q 036314 97 FDAEELVNHPKKIRSFKILRGHKASVHSIAAETSG-NMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLE 175 (347)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~-~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (347)
+++++ ..+.+++|.+-|+++.-..-| .++.||+.|+++||||++..++
T Consensus 119 ~~tG~---------~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~---------------------- 167 (338)
T KOG0265|consen 119 AETGK---------RIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEA---------------------- 167 (338)
T ss_pred cccce---------eeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccch----------------------
Confidence 99885 455688999999999855556 4667999999999999986432
Q ss_pred ccccccccCCccceEEEEeC-CCCeEEEEecCCcEEEEECCCCceeeeeeeC-eeeEEEEeeCCCCcEEEEecCCCcEEE
Q 036314 176 GEAISTLVGHTQCVSSVVWP-QQETIYSASWDHSVRTWDVEMGKDLSDIFCG-KALNCIDIGGEGSALIAAGGSDPILRI 253 (347)
Q Consensus 176 ~~~~~~~~~h~~~v~~~~~~-~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~la~~~~d~~i~i 253 (347)
++++.. .-.+.++.|. .+..+++|+-|+.|++||++.+.....+..+ .++..+..++.+ ..+.+-+-|+++++
T Consensus 168 ---~~t~~~-kyqltAv~f~d~s~qv~sggIdn~ikvWd~r~~d~~~~lsGh~DtIt~lsls~~g-s~llsnsMd~tvrv 242 (338)
T KOG0265|consen 168 ---IKTFEN-KYQLTAVGFKDTSDQVISGGIDNDIKVWDLRKNDGLYTLSGHADTITGLSLSRYG-SFLLSNSMDNTVRV 242 (338)
T ss_pred ---hhcccc-ceeEEEEEecccccceeeccccCceeeeccccCcceEEeecccCceeeEEeccCC-CccccccccceEEE
Confidence 222211 2246788885 5678999999999999999988888777654 467888887655 46677888999999
Q ss_pred EeCCCCCCCC-CeEEecCCCC----CeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeecCC-C
Q 036314 254 WDPRKPGTSA-PVFQFSSHNS----WISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRG-D 327 (347)
Q Consensus 254 wd~~~~~~~~-~~~~~~~h~~----~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~~-~ 327 (347)
||.+.-.... .+..+.+|.- ....++|+|++. .+.+|+.|..+.+||......+..+.||.+.|.+++|+|. .
T Consensus 243 wd~rp~~p~~R~v~if~g~~hnfeknlL~cswsp~~~-~i~ags~dr~vyvwd~~~r~~lyklpGh~gsvn~~~Fhp~e~ 321 (338)
T KOG0265|consen 243 WDVRPFAPSQRCVKIFQGHIHNFEKNLLKCSWSPNGT-KITAGSADRFVYVWDTTSRRILYKLPGHYGSVNEVDFHPTEP 321 (338)
T ss_pred EEecccCCCCceEEEeecchhhhhhhcceeeccCCCC-ccccccccceEEEeecccccEEEEcCCcceeEEEeeecCCCc
Confidence 9998532222 2556666643 356789999985 5899999999999999988889999999999999999974 4
Q ss_pred EEEEccCCceEEE
Q 036314 328 SVISGGVDSKLCV 340 (347)
Q Consensus 328 ~l~s~s~D~~v~v 340 (347)
.|.+++.|++|.+
T Consensus 322 iils~~sdk~i~l 334 (338)
T KOG0265|consen 322 IILSCSSDKTIYL 334 (338)
T ss_pred EEEEeccCceeEe
Confidence 7999999999975
No 28
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.9e-35 Score=235.55 Aligned_cols=261 Identities=26% Similarity=0.392 Sum_probs=212.0
Q ss_pred CCeEEEEcCC-CeEEEEee--ccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeecccc
Q 036314 44 DNLGRVWKAG-GVCTHILE--GHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKA 120 (347)
Q Consensus 44 d~~i~iw~~~-~~~~~~l~--~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~ 120 (347)
.|++.|-+.. ++-+..+. .-++.+..++|++... ..+++++.||++|+||+.. +..++..++.|+.
T Consensus 37 ~G~L~ile~~~~~gi~e~~s~d~~D~LfdV~Wse~~e---~~~~~a~GDGSLrl~d~~~--------~s~Pi~~~kEH~~ 105 (311)
T KOG0277|consen 37 NGRLFILEVTDPKGIQECQSYDTEDGLFDVAWSENHE---NQVIAASGDGSLRLFDLTM--------PSKPIHKFKEHKR 105 (311)
T ss_pred CceEEEEecCCCCCeEEEEeeecccceeEeeecCCCc---ceEEEEecCceEEEeccCC--------CCcchhHHHhhhh
Confidence 4566676653 22222222 2346789999998543 3689999999999999642 2346778889999
Q ss_pred ceEEEEEeCC-CCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeC--CC
Q 036314 121 SVHSIAAETS-GNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP--QQ 197 (347)
Q Consensus 121 ~V~~v~~s~~-~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~ 197 (347)
.|.++.+++. +..++++|+|+|||+|+...+ ..++++.||..+|....|+ ..
T Consensus 106 EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~-------------------------~Sv~Tf~gh~~~Iy~a~~sp~~~ 160 (311)
T KOG0277|consen 106 EVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRP-------------------------NSVQTFNGHNSCIYQAAFSPHIP 160 (311)
T ss_pred heEEeccccccceeEEeeccCCceEeecCCCC-------------------------cceEeecCCccEEEEEecCCCCC
Confidence 9999999875 457788899999999987643 2367899999999999984 46
Q ss_pred CeEEEEecCCcEEEEECCCCceeeeeeeCe-eeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCee
Q 036314 198 ETIYSASWDHSVRTWDVEMGKDLSDIFCGK-ALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWIS 276 (347)
Q Consensus 198 ~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~ 276 (347)
+.++++|.|+++++||++..-....+..+. ++.|.+++-.+.+++++|+.|+.|+.||+|+-. .|++.+.+|.-.|+
T Consensus 161 nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r--~pl~eL~gh~~AVR 238 (311)
T KOG0277|consen 161 NLFASASGDGTLRLWDVRSPGKFMSIEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLR--TPLFELNGHGLAVR 238 (311)
T ss_pred CeEEEccCCceEEEEEecCCCceeEEEeccceeEeecccccCCcEEEecCCCceEEEEehhhcc--ccceeecCCceEEE
Confidence 789999999999999998754444455444 788889987788899999999999999999754 35889999999999
Q ss_pred EEEeCCCCCeEEEEEeCCCcEEEEEcCCCcc-ceeecCCCCeEEEEeecC--CCEEEEccCCceEEEee
Q 036314 277 ACKWHNKSWFHLISASYDGKVMLWDLRTAWP-LSVIDSHKDKVLCADWWR--GDSVISGGVDSKLCVSS 342 (347)
Q Consensus 277 ~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~-~~~~~~h~~~v~~~~~~~--~~~l~s~s~D~~v~vw~ 342 (347)
.++|||....+|||+++|=+++|||...+.. +.+...|++-|.+++|++ +.++|+++.|+.+.||.
T Consensus 239 kvk~Sph~~~lLaSasYDmT~riw~~~~~ds~~e~~~~HtEFv~g~Dws~~~~~~vAs~gWDe~l~Vw~ 307 (311)
T KOG0277|consen 239 KVKFSPHHASLLASASYDMTVRIWDPERQDSAIETVDHHTEFVCGLDWSLFDPGQVASTGWDELLYVWN 307 (311)
T ss_pred EEecCcchhhHhhhccccceEEecccccchhhhhhhhccceEEeccccccccCceeeecccccceeeec
Confidence 9999999888899999999999999986544 456678999999999984 67999999999999997
No 29
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=100.00 E-value=4.1e-36 Score=238.93 Aligned_cols=286 Identities=21% Similarity=0.329 Sum_probs=234.7
Q ss_pred cCCCCCcCCceeeccCC---CCC-EEEEEecCCeEEEEcC-CCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCc
Q 036314 17 EEEPSLHDDWVSAVDGS---NPG-FILTGCYDNLGRVWKA-GGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQT 91 (347)
Q Consensus 17 ~~~~~~h~~~v~~~~~~---~~~-~l~sg~~d~~i~iw~~-~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~ 91 (347)
...-.+|+.+|..++|+ +++ +|+++|.|+.-++-+- .|..+-+|.||.+.|.+..... +....|+++.|-+
T Consensus 7 pl~c~ghtrpvvdl~~s~itp~g~flisa~kd~~pmlr~g~tgdwigtfeghkgavw~~~l~~----na~~aasaaadft 82 (334)
T KOG0278|consen 7 PLTCHGHTRPVVDLAFSPITPDGYFLISASKDGKPMLRNGDTGDWIGTFEGHKGAVWSATLNK----NATRAASAAADFT 82 (334)
T ss_pred ceEEcCCCcceeEEeccCCCCCceEEEEeccCCCchhccCCCCCcEEeeeccCcceeeeecCc----hhhhhhhhcccch
Confidence 33456899999999987 344 7899999999888875 4788999999999999877654 2345789999999
Q ss_pred EEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccc
Q 036314 92 LRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEE 171 (347)
Q Consensus 92 v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 171 (347)
.++||.-++..+. .| .|+.-|.+++|+.|.+.|++|+.+..+||||++.++.
T Consensus 83 akvw~a~tgdelh---------sf-~hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~A------------------ 134 (334)
T KOG0278|consen 83 AKVWDAVTGDELH---------SF-EHKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPKA------------------ 134 (334)
T ss_pred hhhhhhhhhhhhh---------hh-hhhheeeeEEecccchhhhccchHHHhhhhhccCCCC------------------
Confidence 9999976664321 22 4888899999999999999999999999999986543
Q ss_pred ccccccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCc
Q 036314 172 PQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPI 250 (347)
Q Consensus 172 ~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~ 250 (347)
+...+.+|+..|+.+.| ..++.++|.+.|++||+||.+++..+..++...+++.+.+++++ .++ +-.+.+.
T Consensus 135 ------pp~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~v~sL~~~s~VtSlEvs~dG-~il-Tia~gss 206 (334)
T KOG0278|consen 135 ------PPKEISGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTEVQSLEFNSPVTSLEVSQDG-RIL-TIAYGSS 206 (334)
T ss_pred ------CchhhcCCCCcceeEEEeccCceEEeeccCCceEEEEeccCcEEEEEecCCCCcceeeccCC-CEE-EEecCce
Confidence 24467889999999988 46677889899999999999999999999999999999987654 344 4456789
Q ss_pred EEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceee-cCCCCeEEEEeecC-CCE
Q 036314 251 LRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVI-DSHKDKVLCADWWR-GDS 328 (347)
Q Consensus 251 i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~-~~h~~~v~~~~~~~-~~~ 328 (347)
|.+||...-+ .++.+.- ...|.+..++|+. ..+++|++|..++.||..+++.+..+ .+|.++|.||.|+| |..
T Consensus 207 V~Fwdaksf~---~lKs~k~-P~nV~SASL~P~k-~~fVaGged~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPdGE~ 281 (334)
T KOG0278|consen 207 VKFWDAKSFG---LLKSYKM-PCNVESASLHPKK-EFFVAGGEDFKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSPDGEL 281 (334)
T ss_pred eEEecccccc---ceeeccC-ccccccccccCCC-ceEEecCcceEEEEEeccCCceeeecccCCCCceEEEEECCCCce
Confidence 9999987532 2333322 2357888899998 46999999999999999999988886 89999999999986 668
Q ss_pred EEEccCCceEEEeecccCC
Q 036314 329 VISGGVDSKLCVSSGVSIQ 347 (347)
Q Consensus 329 l~s~s~D~~v~vw~~~~~~ 347 (347)
.|+||.||+|+||+++..|
T Consensus 282 yAsGSEDGTirlWQt~~~~ 300 (334)
T KOG0278|consen 282 YASGSEDGTIRLWQTTPGK 300 (334)
T ss_pred eeccCCCceEEEEEecCCC
Confidence 9999999999999987543
No 30
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=100.00 E-value=4.9e-35 Score=265.60 Aligned_cols=238 Identities=26% Similarity=0.430 Sum_probs=204.4
Q ss_pred CCceeeccCCCCC-EEEEEecCCeEEEEcCCC--------------------------------eEEEEeeccCCceEEE
Q 036314 24 DDWVSAVDGSNPG-FILTGCYDNLGRVWKAGG--------------------------------VCTHILEGHCGAVSSV 70 (347)
Q Consensus 24 ~~~v~~~~~~~~~-~l~sg~~d~~i~iw~~~~--------------------------------~~~~~l~~h~~~V~~v 70 (347)
...++|+.|+++. .||-|-.|..|++|.... ...+.+.||+++|...
T Consensus 378 ~~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~GH~GPVyg~ 457 (707)
T KOG0263|consen 378 YQGVTCAEFSDDSSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYGHSGPVYGC 457 (707)
T ss_pred CCcceeEeecCCcchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeecCCCceeee
Confidence 3568899999764 788888899999995431 1235699999999999
Q ss_pred EEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCC
Q 036314 71 NIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTND 150 (347)
Q Consensus 71 ~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~ 150 (347)
.|+|+. .+|+++|+|++||+|.+.+.. ++...+||..||..+.|+|-|-++||+|.|++.++|....
T Consensus 458 sFsPd~----rfLlScSED~svRLWsl~t~s---------~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d~ 524 (707)
T KOG0263|consen 458 SFSPDR----RFLLSCSEDSSVRLWSLDTWS---------CLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWSTDH 524 (707)
T ss_pred eecccc----cceeeccCCcceeeeecccce---------eEEEecCCCcceeeEEecCCceEEEecCCCceeeeeeccc
Confidence 999954 479999999999999998754 4566789999999999999999999999999999998754
Q ss_pred CCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeeeeC-ee
Q 036314 151 SDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCG-KA 228 (347)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~-~~ 228 (347)
. .+++.+.+|-..|.|+.| |+..++++||.|++||+||+.+|..++-+..+ .+
T Consensus 525 ~-------------------------~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~ 579 (707)
T KOG0263|consen 525 N-------------------------KPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGP 579 (707)
T ss_pred C-------------------------CchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCCCCc
Confidence 2 457788999999999988 67889999999999999999999988776543 47
Q ss_pred eEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCC
Q 036314 229 LNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRT 304 (347)
Q Consensus 229 ~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~ 304 (347)
+.+++++| .+..+|+|+.|+.|++||+... .++.++.+|++.|.++.|+.+|. .||+|+.|.+|++||+.+
T Consensus 580 V~al~~Sp-~Gr~LaSg~ed~~I~iWDl~~~---~~v~~l~~Ht~ti~SlsFS~dg~-vLasgg~DnsV~lWD~~~ 650 (707)
T KOG0263|consen 580 VTALAFSP-CGRYLASGDEDGLIKIWDLANG---SLVKQLKGHTGTIYSLSFSRDGN-VLASGGADNSVRLWDLTK 650 (707)
T ss_pred eEEEEEcC-CCceEeecccCCcEEEEEcCCC---cchhhhhcccCceeEEEEecCCC-EEEecCCCCeEEEEEchh
Confidence 89999977 4678999999999999999853 34678889999999999999995 699999999999999875
No 31
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=100.00 E-value=1.5e-33 Score=244.36 Aligned_cols=280 Identities=27% Similarity=0.473 Sum_probs=230.3
Q ss_pred CCCcCCceeeccCCC-CCEEEEEecCCeEEEEcCC-CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEec
Q 036314 20 PSLHDDWVSAVDGSN-PGFILTGCYDNLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKF 97 (347)
Q Consensus 20 ~~~h~~~v~~~~~~~-~~~l~sg~~d~~i~iw~~~-~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~ 97 (347)
..+|++.|+++++++ +++|++++.||.+++|+.. +.....+.+|...+..+.|.+.+ ..|++++.||.|++|++
T Consensus 5 ~~~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~l~~~~~~~~i~i~~~ 80 (289)
T cd00200 5 LKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADG----TYLASGSSDKTIRLWDL 80 (289)
T ss_pred hcccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCC----CEEEEEcCCCeEEEEEc
Confidence 448999999999985 5799999999999999975 45667788999999999998854 36899999999999999
Q ss_pred cccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccccc
Q 036314 98 DAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGE 177 (347)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (347)
..++ ....+..|...+.++.|+++++++++++.|+.|++|++.+. .
T Consensus 81 ~~~~---------~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-------------------------~ 126 (289)
T cd00200 81 ETGE---------CVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETG-------------------------K 126 (289)
T ss_pred Cccc---------ceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCc-------------------------E
Confidence 7643 34456789989999999999999999999999999998742 1
Q ss_pred ccccccCCccceEEEEeCC-CCeEEEEecCCcEEEEECCCCceeeeeeeCe-eeEEEEeeCCCCcEEEEecCCCcEEEEe
Q 036314 178 AISTLVGHTQCVSSVVWPQ-QETIYSASWDHSVRTWDVEMGKDLSDIFCGK-ALNCIDIGGEGSALIAAGGSDPILRIWD 255 (347)
Q Consensus 178 ~~~~~~~h~~~v~~~~~~~-~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~la~~~~d~~i~iwd 255 (347)
....+..|...+.++.|.+ +..+++++.|+.+++||++.++.+..+.... .+.++.+.+++ ..+++++.|+.+++||
T Consensus 127 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~~~~i~i~d 205 (289)
T cd00200 127 CLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTGHTGEVNSVAFSPDG-EKLLSSSSDGTIKLWD 205 (289)
T ss_pred EEEEeccCCCcEEEEEEcCcCCEEEEEcCCCcEEEEEccccccceeEecCccccceEEECCCc-CEEEEecCCCcEEEEE
Confidence 2334556888899999854 5667777779999999998877766665443 67889997655 4566777799999999
Q ss_pred CCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeecC-CCEEEEccC
Q 036314 256 PRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGV 334 (347)
Q Consensus 256 ~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~ 334 (347)
++.. .....+..|...+.++.|+|++ .++++++.|+.|++||+++++....+.+|...+.++.|++ +..|++++.
T Consensus 206 ~~~~---~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 281 (289)
T cd00200 206 LSTG---KCLGTLRGHENGVNSVAFSPDG-YLLASGSEDGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSA 281 (289)
T ss_pred CCCC---ceecchhhcCCceEEEEEcCCC-cEEEEEcCCCcEEEEEcCCceeEEEccccCCcEEEEEECCCCCEEEEecC
Confidence 8752 2355666788899999999985 5688888899999999998888888889999999999986 578999999
Q ss_pred CceEEEee
Q 036314 335 DSKLCVSS 342 (347)
Q Consensus 335 D~~v~vw~ 342 (347)
|+.|++|+
T Consensus 282 d~~i~iw~ 289 (289)
T cd00200 282 DGTIRIWD 289 (289)
T ss_pred CCeEEecC
Confidence 99999996
No 32
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=3e-35 Score=245.15 Aligned_cols=257 Identities=26% Similarity=0.385 Sum_probs=217.2
Q ss_pred EEEEcCCCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEE
Q 036314 47 GRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIA 126 (347)
Q Consensus 47 i~iw~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~ 126 (347)
-..|=++....+.+.+|..+|+.+-|+|. ...++++++|++|++||+.++++ ...++||++.|.+++
T Consensus 91 ~~~wipRp~l~~~l~g~r~~vt~v~~hp~----~~~v~~as~d~tikv~D~~tg~~---------e~~LrGHt~sv~di~ 157 (406)
T KOG0295|consen 91 PALWIPRPNLVQKLAGHRSSVTRVIFHPS----EALVVSASEDATIKVFDTETGEL---------ERSLRGHTDSVFDIS 157 (406)
T ss_pred hhhcCCCCCchhhhhccccceeeeeeccC----ceEEEEecCCceEEEEEccchhh---------hhhhhccccceeEEE
Confidence 33454444566778899999999999984 34789999999999999998875 346889999999999
Q ss_pred EeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CCCCeEEEEec
Q 036314 127 AETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASW 205 (347)
Q Consensus 127 ~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~ 205 (347)
|+..|++++++|.|-.+++||.+.. ..+++.+.+|...|.+++| |.+.+++|++.
T Consensus 158 ~~a~Gk~l~tcSsDl~~~LWd~~~~------------------------~~c~ks~~gh~h~vS~V~f~P~gd~ilS~sr 213 (406)
T KOG0295|consen 158 FDASGKYLATCSSDLSAKLWDFDTF------------------------FRCIKSLIGHEHGVSSVFFLPLGDHILSCSR 213 (406)
T ss_pred EecCccEEEecCCccchhheeHHHH------------------------HHHHHHhcCcccceeeEEEEecCCeeeeccc
Confidence 9999999999999999999997642 2467788999999999986 88999999999
Q ss_pred CCcEEEEECCCCceeeeeeeCee-eEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCC
Q 036314 206 DHSVRTWDVEMGKDLSDIFCGKA-LNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKS 284 (347)
Q Consensus 206 dg~v~vwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~ 284 (347)
|.+|+.||+.++.++.++..+.. +..+... .++.++|+++.|.++++|-.... .....+..|.-.|.+++|.|..
T Consensus 214 D~tik~We~~tg~cv~t~~~h~ewvr~v~v~-~DGti~As~s~dqtl~vW~~~t~---~~k~~lR~hEh~vEci~wap~~ 289 (406)
T KOG0295|consen 214 DNTIKAWECDTGYCVKTFPGHSEWVRMVRVN-QDGTIIASCSNDQTLRVWVVATK---QCKAELREHEHPVECIAWAPES 289 (406)
T ss_pred ccceeEEecccceeEEeccCchHhEEEEEec-CCeeEEEecCCCceEEEEEeccc---hhhhhhhccccceEEEEecccc
Confidence 99999999999999998876554 4555554 45679999999999999987642 1234566788889999988752
Q ss_pred --------------CeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeecC-CCEEEEccCCceEEEeecc
Q 036314 285 --------------WFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 285 --------------~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~D~~v~vw~~~ 344 (347)
...+.++|.|++||+||+.++.++.++.+|.+-|.+++|+| |++|+|+..|++++||+..
T Consensus 290 ~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~ 364 (406)
T KOG0295|consen 290 SYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLK 364 (406)
T ss_pred cCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecccceeeeeEEcCCCeEEEEEecCCcEEEEEec
Confidence 24799999999999999999999999999999999999987 6789999999999999975
No 33
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=100.00 E-value=1.3e-33 Score=235.48 Aligned_cols=280 Identities=21% Similarity=0.275 Sum_probs=221.9
Q ss_pred CCCcCCceeeccCC-CCCEEEEEecCCeEEEEcC-CCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEec
Q 036314 20 PSLHDDWVSAVDGS-NPGFILTGCYDNLGRVWKA-GGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKF 97 (347)
Q Consensus 20 ~~~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~-~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~ 97 (347)
...|++.|-+++.. +.+++||||.|....+|+. .|.....+.+|.+.|+++.|+. ++.+||||..+|.|++|+.
T Consensus 60 F~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~Fsh----dgtlLATGdmsG~v~v~~~ 135 (399)
T KOG0296|consen 60 FDKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSH----DGTLLATGDMSGKVLVFKV 135 (399)
T ss_pred hhhcCCceEEEEeCCCCceEEecCCCceEEEEEccCCcceeEecCCCCceEEEEEcc----CceEEEecCCCccEEEEEc
Confidence 45799999999977 4569999999999999997 4677788999999999999998 4468999999999999999
Q ss_pred cccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccccc
Q 036314 98 DAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGE 177 (347)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (347)
.++.. ...+..--..+-=+.|+|-+..|+.|+.||.+-.|.+.+. .
T Consensus 136 stg~~---------~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~-------------------------~ 181 (399)
T KOG0296|consen 136 STGGE---------QWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQ-------------------------A 181 (399)
T ss_pred ccCce---------EEEeecccCceEEEEecccccEEEeecCCCcEEEEECCCc-------------------------c
Confidence 87642 1122222334555788999999999999999999998753 2
Q ss_pred ccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeeeeC--eeeEEE----------------------
Q 036314 178 AISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCG--KALNCI---------------------- 232 (347)
Q Consensus 178 ~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~--~~~~~~---------------------- 232 (347)
..+.+.||+.++.+=.| |+|++++++..||+|++||+++++++..+... .+..|+
T Consensus 182 ~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~ 261 (399)
T KOG0296|consen 182 LCKVMSGHNSPCTCGEFIPDGKRILTGYDDGTIIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVN 261 (399)
T ss_pred eeeEecCCCCCcccccccCCCceEEEEecCceEEEEecCCCceeEEecccccCcCCccccccccceeEeccCCccEEEEc
Confidence 35677889888776655 89999999999999999999999887665410 000000
Q ss_pred ------EeeCC------------------------CCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCC
Q 036314 233 ------DIGGE------------------------GSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHN 282 (347)
Q Consensus 233 ------~~~~~------------------------~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~ 282 (347)
...-+ .-.+.|.|+-||+|.|||+... . .+..-.|...|..+.|-+
T Consensus 262 ~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~G~vdG~i~iyD~a~~---~-~R~~c~he~~V~~l~w~~ 337 (399)
T KOG0296|consen 262 NGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLPLAACGSVDGTIAIYDLAAS---T-LRHICEHEDGVTKLKWLN 337 (399)
T ss_pred cccceEEEecCCCCccccccchhhhhhhhhcccccccchhhcccccceEEEEecccc---h-hheeccCCCceEEEEEcC
Confidence 00000 0124678899999999998742 2 233446999999999998
Q ss_pred CCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeecC-CCEEEEccCCceEEEeec
Q 036314 283 KSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKLCVSSG 343 (347)
Q Consensus 283 ~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~D~~v~vw~~ 343 (347)
.. +|++++.||.|+.||.|+|+.+.++.||+..|++++++| +++++|+|.|++.+|+.-
T Consensus 338 -t~-~l~t~c~~g~v~~wDaRtG~l~~~y~GH~~~Il~f~ls~~~~~vvT~s~D~~a~VF~v 397 (399)
T KOG0296|consen 338 -TD-YLLTACANGKVRQWDARTGQLKFTYTGHQMGILDFALSPQKRLVVTVSDDNTALVFEV 397 (399)
T ss_pred -cc-hheeeccCceEEeeeccccceEEEEecCchheeEEEEcCCCcEEEEecCCCeEEEEec
Confidence 33 599999999999999999999999999999999999986 667999999999999754
No 34
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=100.00 E-value=1.2e-35 Score=246.34 Aligned_cols=244 Identities=25% Similarity=0.453 Sum_probs=204.1
Q ss_pred cCCCCCcCCceeeccCCCCCEEEEEecCCeEEEEcC-CCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEE
Q 036314 17 EEEPSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKA-GGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLW 95 (347)
Q Consensus 17 ~~~~~~h~~~v~~~~~~~~~~l~sg~~d~~i~iw~~-~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~w 95 (347)
...+.||++.|.|+.+. ...|+|||.|.|||+||. +|.++.++-+|...|..+.|+. .+++|+|.|.++++|
T Consensus 230 ~~~L~GHtGSVLCLqyd-~rviisGSSDsTvrvWDv~tge~l~tlihHceaVLhlrf~n------g~mvtcSkDrsiaVW 302 (499)
T KOG0281|consen 230 LKILTGHTGSVLCLQYD-ERVIVSGSSDSTVRVWDVNTGEPLNTLIHHCEAVLHLRFSN------GYMVTCSKDRSIAVW 302 (499)
T ss_pred HHhhhcCCCcEEeeecc-ceEEEecCCCceEEEEeccCCchhhHHhhhcceeEEEEEeC------CEEEEecCCceeEEE
Confidence 34578999999999985 459999999999999997 5788999999999999999975 278999999999999
Q ss_pred eccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccc
Q 036314 96 KFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLE 175 (347)
Q Consensus 96 d~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (347)
|+.+.. ...+...+.||.++|+.|.|+ .++++|+|.|.||++|++.+
T Consensus 303 dm~sps------~it~rrVLvGHrAaVNvVdfd--~kyIVsASgDRTikvW~~st------------------------- 349 (499)
T KOG0281|consen 303 DMASPT------DITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWSTST------------------------- 349 (499)
T ss_pred eccCch------HHHHHHHHhhhhhheeeeccc--cceEEEecCCceEEEEeccc-------------------------
Confidence 997643 233455788999999999986 46999999999999999875
Q ss_pred ccccccccCCccceEEEEeCCCCeEEEEecCCcEEEEECCCCceeeeeeeCe-eeEEEEeeCCCCcEEEEecCCCcEEEE
Q 036314 176 GEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGK-ALNCIDIGGEGSALIAAGGSDPILRIW 254 (347)
Q Consensus 176 ~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~la~~~~d~~i~iw 254 (347)
+++++++.+|...|.|+.+ .++.++|||.|.+|++||++.|.+++.++.++ -+.|+-|. ...+++|++||+|++|
T Consensus 350 ~efvRtl~gHkRGIAClQY-r~rlvVSGSSDntIRlwdi~~G~cLRvLeGHEeLvRciRFd---~krIVSGaYDGkikvW 425 (499)
T KOG0281|consen 350 CEFVRTLNGHKRGIACLQY-RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD---NKRIVSGAYDGKIKVW 425 (499)
T ss_pred eeeehhhhcccccceehhc-cCeEEEecCCCceEEEEeccccHHHHHHhchHHhhhheeec---CceeeeccccceEEEE
Confidence 3567889999988888875 56789999999999999999999998887655 47899883 3468899999999999
Q ss_pred eCCCCCCCC------CeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCcc
Q 036314 255 DPRKPGTSA------PVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWP 307 (347)
Q Consensus 255 d~~~~~~~~------~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~ 307 (347)
|+.....+. .+.++..|.+.|..+.|.. ..+++++.|.+|.|||..++-+
T Consensus 426 dl~aaldpra~~~~~Cl~~lv~hsgRVFrLQFD~---fqIvsssHddtILiWdFl~~~~ 481 (499)
T KOG0281|consen 426 DLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDE---FQIISSSHDDTILIWDFLNGPP 481 (499)
T ss_pred ecccccCCcccccchHHHhhhhccceeEEEeecc---eEEEeccCCCeEEEEEcCCCCc
Confidence 986543331 3456678999999999942 5799999999999999987644
No 35
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=100.00 E-value=6.4e-34 Score=231.86 Aligned_cols=246 Identities=23% Similarity=0.421 Sum_probs=205.2
Q ss_pred EEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEe
Q 036314 58 HILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSG 137 (347)
Q Consensus 58 ~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sg 137 (347)
..+.||++.|..+.|+|++ ..+|||+.|..|-+|++... .+..-++.+|+++|..+.|.+|++.++|+
T Consensus 41 m~l~gh~geI~~~~F~P~g----s~~aSgG~Dr~I~LWnv~gd--------ceN~~~lkgHsgAVM~l~~~~d~s~i~S~ 108 (338)
T KOG0265|consen 41 MLLPGHKGEIYTIKFHPDG----SCFASGGSDRAIVLWNVYGD--------CENFWVLKGHSGAVMELHGMRDGSHILSC 108 (338)
T ss_pred hhcCCCcceEEEEEECCCC----CeEeecCCcceEEEEecccc--------ccceeeeccccceeEeeeeccCCCEEEEe
Confidence 3578999999999999944 47999999999999997532 23445678999999999999999999999
Q ss_pred eCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeC--CCCeEEEEecCCcEEEEECC
Q 036314 138 SWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP--QQETIYSASWDHSVRTWDVE 215 (347)
Q Consensus 138 s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~l~s~s~dg~v~vwd~~ 215 (347)
|.|.+++.||++++ ++++.+++|+.+|+++.-. ..+++.|++.|++++|||++
T Consensus 109 gtDk~v~~wD~~tG-------------------------~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R 163 (338)
T KOG0265|consen 109 GTDKTVRGWDAETG-------------------------KRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIR 163 (338)
T ss_pred cCCceEEEEecccc-------------------------eeeehhccccceeeecCccccCCeEEEecCCCceEEEEeec
Confidence 99999999999864 5577889999999988722 23468899999999999999
Q ss_pred CCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCC
Q 036314 216 MGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDG 295 (347)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~ 295 (347)
...+++++....++.++.|.... ..+.+|+-|+.|++||+++.. ....+.||.+.|..+..+|+|.+ +.+=+.|.
T Consensus 164 ~k~~~~t~~~kyqltAv~f~d~s-~qv~sggIdn~ikvWd~r~~d---~~~~lsGh~DtIt~lsls~~gs~-llsnsMd~ 238 (338)
T KOG0265|consen 164 KKEAIKTFENKYQLTAVGFKDTS-DQVISGGIDNDIKVWDLRKND---GLYTLSGHADTITGLSLSRYGSF-LLSNSMDN 238 (338)
T ss_pred ccchhhccccceeEEEEEecccc-cceeeccccCceeeeccccCc---ceEEeecccCceeeEEeccCCCc-cccccccc
Confidence 98888888777788889986444 456788999999999998643 37889999999999999999974 99999999
Q ss_pred cEEEEEcCCCc----cceeecCCC----CeEEEEeecC-CCEEEEccCCceEEEeeccc
Q 036314 296 KVMLWDLRTAW----PLSVIDSHK----DKVLCADWWR-GDSVISGGVDSKLCVSSGVS 345 (347)
Q Consensus 296 ~i~lwd~~~~~----~~~~~~~h~----~~v~~~~~~~-~~~l~s~s~D~~v~vw~~~~ 345 (347)
++++||++... +++.+++|. -..+.++|+| +..+.+|+.|+.+.+|+..+
T Consensus 239 tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL~cswsp~~~~i~ags~dr~vyvwd~~~ 297 (338)
T KOG0265|consen 239 TVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLLKCSWSPNGTKITAGSADRFVYVWDTTS 297 (338)
T ss_pred eEEEEEecccCCCCceEEEeecchhhhhhhcceeeccCCCCccccccccceEEEeeccc
Confidence 99999998642 256677653 2356779986 56788999999999999865
No 36
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=100.00 E-value=1.5e-32 Score=220.95 Aligned_cols=249 Identities=24% Similarity=0.397 Sum_probs=201.8
Q ss_pred EEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeee-eccccceEEEEEeCCCCEE
Q 036314 56 CTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKIL-RGHKASVHSIAAETSGNMV 134 (347)
Q Consensus 56 ~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~-~~h~~~V~~v~~s~~~~~l 134 (347)
..+.+.+|.+.+..++|+|.. +..|||++.|..||+|+...+. ...+...+ .+|+..|+++||+|.|++|
T Consensus 6 ~~~~~~gh~~r~W~~awhp~~---g~ilAscg~Dk~vriw~~~~~~------s~~ck~vld~~hkrsVRsvAwsp~g~~L 76 (312)
T KOG0645|consen 6 LEQKLSGHKDRVWSVAWHPGK---GVILASCGTDKAVRIWSTSSGD------SWTCKTVLDDGHKRSVRSVAWSPHGRYL 76 (312)
T ss_pred eEEeecCCCCcEEEEEeccCC---ceEEEeecCCceEEEEecCCCC------cEEEEEeccccchheeeeeeecCCCcEE
Confidence 456789999999999999953 3479999999999999987421 12333333 4799999999999999999
Q ss_pred EEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeC-CCCeEEEEecCCcEEEEE
Q 036314 135 CSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP-QQETIYSASWDHSVRTWD 213 (347)
Q Consensus 135 ~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~l~s~s~dg~v~vwd 213 (347)
++||.|+++.||.-.++ +.+++.++.||...|.+++|+ +|.+||+++.|+.|-||.
T Consensus 77 a~aSFD~t~~Iw~k~~~-----------------------efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe 133 (312)
T KOG0645|consen 77 ASASFDATVVIWKKEDG-----------------------EFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWE 133 (312)
T ss_pred EEeeccceEEEeecCCC-----------------------ceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEE
Confidence 99999999999965433 235677899999999999995 788999999999999999
Q ss_pred CCCCce---eeeeee-CeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEE
Q 036314 214 VEMGKD---LSDIFC-GKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLI 289 (347)
Q Consensus 214 ~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~ 289 (347)
+..+.. +..++. ...+..+.++|.. .+|+++++|++|++|+-...+.....+++.+|.+.|.+++|+|.|. .|+
T Consensus 134 ~deddEfec~aVL~~HtqDVK~V~WHPt~-dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~-rl~ 211 (312)
T KOG0645|consen 134 IDEDDEFECIAVLQEHTQDVKHVIWHPTE-DLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGS-RLV 211 (312)
T ss_pred ecCCCcEEEEeeeccccccccEEEEcCCc-ceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCc-eEE
Confidence 874433 333333 3467888888754 4889999999999998654445566889999999999999999985 599
Q ss_pred EEeCCCcEEEEEcCCCccceeecCCCCeEEEEeecCCCEEEEccCCceEEEeec
Q 036314 290 SASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGGVDSKLCVSSG 343 (347)
Q Consensus 290 s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~D~~v~vw~~ 343 (347)
+++.|++++||-..... . ..|..+++.+.|. ...|||++.|+.|+|+.-
T Consensus 212 s~sdD~tv~Iw~~~~~~--~--~~~sr~~Y~v~W~-~~~IaS~ggD~~i~lf~~ 260 (312)
T KOG0645|consen 212 SCSDDGTVSIWRLYTDL--S--GMHSRALYDVPWD-NGVIASGGGDDAIRLFKE 260 (312)
T ss_pred EecCCcceEeeeeccCc--c--hhcccceEeeeec-ccceEeccCCCEEEEEEe
Confidence 99999999999876321 1 2477899999997 558999999999999864
No 37
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=100.00 E-value=1.8e-34 Score=240.41 Aligned_cols=275 Identities=19% Similarity=0.322 Sum_probs=221.5
Q ss_pred CCCcCCceeeccCCCC--CEEEEEecCCeEEEEcCCC-eEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEe
Q 036314 20 PSLHDDWVSAVDGSNP--GFILTGCYDNLGRVWKAGG-VCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWK 96 (347)
Q Consensus 20 ~~~h~~~v~~~~~~~~--~~l~sg~~d~~i~iw~~~~-~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd 96 (347)
+.||.+.|.+++-.+. ..++||+.||.|+|||+.. .|.+.|..|.+.|..|.+.. ..+++++.|.+||.|.
T Consensus 62 L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~------~~~~tvgdDKtvK~wk 135 (433)
T KOG0268|consen 62 LDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQ------TSFFTVGDDKTVKQWK 135 (433)
T ss_pred ccccccccchhhcCcchhhhhhccccCceEEEEehhhhhhhheeecccCceeeEEecc------cceEEecCCcceeeee
Confidence 4799999999996544 4799999999999999864 57889999999999999865 2478999999999999
Q ss_pred ccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccc
Q 036314 97 FDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEG 176 (347)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (347)
++.. +..++.+ +..+..+.-+..+..++|+|.+ |.|||.....
T Consensus 136 ~~~~----------p~~tilg-~s~~~gIdh~~~~~~FaTcGe~--i~IWD~~R~~------------------------ 178 (433)
T KOG0268|consen 136 IDGP----------PLHTILG-KSVYLGIDHHRKNSVFATCGEQ--IDIWDEQRDN------------------------ 178 (433)
T ss_pred ccCC----------cceeeec-cccccccccccccccccccCce--eeecccccCC------------------------
Confidence 8752 3344433 4557777777778899999866 8899976432
Q ss_pred cccccccCCccceEEEEeCCCC--eEEEEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEE
Q 036314 177 EAISTLVGHTQCVSSVVWPQQE--TIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIW 254 (347)
Q Consensus 177 ~~~~~~~~h~~~v~~~~~~~~~--~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iw 254 (347)
+++++.--.+.|.++.|++.+ .|++++.|++|.|||++++.++..+......+.++|.| ....|.+|.+|..++.|
T Consensus 179 -Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KVi~~mRTN~IswnP-eafnF~~a~ED~nlY~~ 256 (433)
T KOG0268|consen 179 -PVSSMSWGADSISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKVILTMRTNTICWNP-EAFNFVAANEDHNLYTY 256 (433)
T ss_pred -ccceeecCCCceeEEecCCCcchheeeeccCCceEEEecccCCccceeeeeccccceecCc-cccceeeccccccceeh
Confidence 233444444567778875433 58889999999999999999998887777788899988 55677889999999999
Q ss_pred eCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCC---CeEEEEeec-CCCEEE
Q 036314 255 DPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHK---DKVLCADWW-RGDSVI 330 (347)
Q Consensus 255 d~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~---~~v~~~~~~-~~~~l~ 330 (347)
|++... .++..+.+|.+.|.+++|||.|.. ++|||.|.+|+||..+.+..-.+ .|+ -.|.||.|+ +.++++
T Consensus 257 DmR~l~--~p~~v~~dhvsAV~dVdfsptG~E-fvsgsyDksIRIf~~~~~~SRdi--YhtkRMq~V~~Vk~S~Dskyi~ 331 (433)
T KOG0268|consen 257 DMRNLS--RPLNVHKDHVSAVMDVDFSPTGQE-FVSGSYDKSIRIFPVNHGHSRDI--YHTKRMQHVFCVKYSMDSKYII 331 (433)
T ss_pred hhhhhc--ccchhhcccceeEEEeccCCCcch-hccccccceEEEeecCCCcchhh--hhHhhhheeeEEEEeccccEEE
Confidence 999754 357778899999999999999965 99999999999999988754332 222 368999997 677899
Q ss_pred EccCCceEEEeecc
Q 036314 331 SGGVDSKLCVSSGV 344 (347)
Q Consensus 331 s~s~D~~v~vw~~~ 344 (347)
|||.|++|++|.+.
T Consensus 332 SGSdd~nvRlWka~ 345 (433)
T KOG0268|consen 332 SGSDDGNVRLWKAK 345 (433)
T ss_pred ecCCCcceeeeecc
Confidence 99999999999875
No 38
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=100.00 E-value=2.3e-32 Score=217.41 Aligned_cols=257 Identities=17% Similarity=0.297 Sum_probs=200.2
Q ss_pred CCceeeccCCCC-CEEEEEecCCeEEEEcCC---CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccc
Q 036314 24 DDWVSAVDGSNP-GFILTGCYDNLGRVWKAG---GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDA 99 (347)
Q Consensus 24 ~~~v~~~~~~~~-~~l~sg~~d~~i~iw~~~---~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~ 99 (347)
+..|..+..+++ +.||++|. ..||+||+. ...+..+.+|++.|.++.|.. +++.++|||+||++||||+..
T Consensus 40 dsqVNrLeiTpdk~~LAaa~~-qhvRlyD~~S~np~Pv~t~e~h~kNVtaVgF~~----dgrWMyTgseDgt~kIWdlR~ 114 (311)
T KOG0315|consen 40 DSQVNRLEITPDKKDLAAAGN-QHVRLYDLNSNNPNPVATFEGHTKNVTAVGFQC----DGRWMYTGSEDGTVKIWDLRS 114 (311)
T ss_pred ccceeeEEEcCCcchhhhccC-CeeEEEEccCCCCCceeEEeccCCceEEEEEee----cCeEEEecCCCceEEEEeccC
Confidence 467888988854 57777764 689999974 236889999999999999988 446899999999999999976
Q ss_pred cccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccccccc
Q 036314 100 EELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAI 179 (347)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (347)
..+ +....|.++|+++..+|+..-|++|..+|.|++||+....+....
T Consensus 115 ~~~----------qR~~~~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~l---------------------- 162 (311)
T KOG0315|consen 115 LSC----------QRNYQHNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHEL---------------------- 162 (311)
T ss_pred ccc----------chhccCCCCcceEEecCCcceEEeecCCCcEEEEEccCCcccccc----------------------
Confidence 322 223357899999999999999999999999999999764321110
Q ss_pred ccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeee------eeeC--eeeEEEEeeCCCCcEEEEecCCCc
Q 036314 180 STLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSD------IFCG--KALNCIDIGGEGSALIAAGGSDPI 250 (347)
Q Consensus 180 ~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~------~~~~--~~~~~~~~~~~~~~~la~~~~d~~ 250 (347)
.......|.++.. +++.+++.+...|++.+|++........ ++.+ ....| -+ +++..+||+++.|.+
T Consensus 163 --iPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C-~l-SPd~k~lat~ssdkt 238 (311)
T KOG0315|consen 163 --IPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRC-LL-SPDVKYLATCSSDKT 238 (311)
T ss_pred --CCCCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEE-EE-CCCCcEEEeecCCce
Confidence 0111235677765 7899999999999999999876433222 2222 22333 34 456678999999999
Q ss_pred EEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeec
Q 036314 251 LRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWW 324 (347)
Q Consensus 251 i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~ 324 (347)
++||+.+.. .+....+.+|..|+..++||.|+. +|+||+.|+.+|+||++.++.+..+.+|.....|++..
T Consensus 239 v~iwn~~~~--~kle~~l~gh~rWvWdc~FS~dg~-YlvTassd~~~rlW~~~~~k~v~qy~gh~K~~vc~~ln 309 (311)
T KOG0315|consen 239 VKIWNTDDF--FKLELVLTGHQRWVWDCAFSADGE-YLVTASSDHTARLWDLSAGKEVRQYQGHHKAAVCVALN 309 (311)
T ss_pred EEEEecCCc--eeeEEEeecCCceEEeeeeccCcc-EEEecCCCCceeecccccCceeeecCCcccccEEEEee
Confidence 999998743 234567889999999999999996 59999999999999999999999999998887877653
No 39
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=7.1e-33 Score=245.30 Aligned_cols=281 Identities=23% Similarity=0.357 Sum_probs=237.4
Q ss_pred CcCCceeeccCCCC-CEEEEEecCCeEEEEcCCC-eEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccc
Q 036314 22 LHDDWVSAVDGSNP-GFILTGCYDNLGRVWKAGG-VCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDA 99 (347)
Q Consensus 22 ~h~~~v~~~~~~~~-~~l~sg~~d~~i~iw~~~~-~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~ 99 (347)
.|.+.|.++++.+. -.++++=++|++.|||-.. ..++.+.-..-+|.+..|.+.. ..+++||+|..||+|++++
T Consensus 11 ~rSdRVKsVd~HPtePw~la~LynG~V~IWnyetqtmVksfeV~~~PvRa~kfiaRk----nWiv~GsDD~~IrVfnynt 86 (794)
T KOG0276|consen 11 SRSDRVKSVDFHPTEPWILAALYNGDVQIWNYETQTMVKSFEVSEVPVRAAKFIARK----NWIVTGSDDMQIRVFNYNT 86 (794)
T ss_pred ccCCceeeeecCCCCceEEEeeecCeeEEEecccceeeeeeeecccchhhheeeecc----ceEEEecCCceEEEEeccc
Confidence 38899999998764 4788888999999999754 4677888888899999998733 4799999999999999987
Q ss_pred cccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccccccc
Q 036314 100 EELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAI 179 (347)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (347)
.+ .+..|.+|.+-|++++.+|...+++|+|.|-+||+||-+.. -.+.
T Consensus 87 ~e---------kV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~------------------------wa~~ 133 (794)
T KOG0276|consen 87 GE---------KVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENE------------------------WACE 133 (794)
T ss_pred ce---------eeEEeeccccceeeeeecCCCCeEEecCCccEEEEeeccCc------------------------eeee
Confidence 64 56789999999999999999999999999999999987642 2356
Q ss_pred ccccCCccceEEEEe-C-CCCeEEEEecCCcEEEEECCCCceeeeeeeC-eeeEEEEeeC-CCCcEEEEecCCCcEEEEe
Q 036314 180 STLVGHTQCVSSVVW-P-QQETIYSASWDHSVRTWDVEMGKDLSDIFCG-KALNCIDIGG-EGSALIAAGGSDPILRIWD 255 (347)
Q Consensus 180 ~~~~~h~~~v~~~~~-~-~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~la~~~~d~~i~iwd 255 (347)
+++.||+..|.+++| | +...++|++.|++|++|.+.++.+..++..+ +.++|+++-+ ++...+++|++|.++++||
T Consensus 134 qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWD 213 (794)
T KOG0276|consen 134 QTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWD 213 (794)
T ss_pred eEEcCcceEEEEEEecCCCccceeeeeccccEEEEEcCCCCCceeeeccccCcceEEeccCCCcceEEecCCCceEEEee
Confidence 789999999999998 4 5568999999999999999988888888744 4799999864 3445789999999999999
Q ss_pred CCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeecC-CCEEEEccC
Q 036314 256 PRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGV 334 (347)
Q Consensus 256 ~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~ 334 (347)
... ...++++.||...|+.+.|+|.=+ .++|||+||++|||.-.+-+...++...-+.|||++-.+ ++.++.|..
T Consensus 214 yQt---k~CV~TLeGHt~Nvs~v~fhp~lp-iiisgsEDGTvriWhs~Ty~lE~tLn~gleRvW~I~~~k~~~~i~vG~D 289 (794)
T KOG0276|consen 214 YQT---KSCVQTLEGHTNNVSFVFFHPELP-IIISGSEDGTVRIWNSKTYKLEKTLNYGLERVWCIAAHKGDGKIAVGFD 289 (794)
T ss_pred cch---HHHHHHhhcccccceEEEecCCCc-EEEEecCCccEEEecCcceehhhhhhcCCceEEEEeecCCCCeEEEecc
Confidence 874 345789999999999999999875 699999999999999988777788877788999999875 446788888
Q ss_pred CceEEEeec
Q 036314 335 DSKLCVSSG 343 (347)
Q Consensus 335 D~~v~vw~~ 343 (347)
.|.|.|--|
T Consensus 290 eg~i~v~lg 298 (794)
T KOG0276|consen 290 EGSVTVKLG 298 (794)
T ss_pred CCcEEEEcc
Confidence 887765433
No 40
>KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only]
Probab=100.00 E-value=5.8e-33 Score=256.24 Aligned_cols=275 Identities=24% Similarity=0.395 Sum_probs=230.8
Q ss_pred CcCCceeeccCCCCCEEEEEecCCeEEEEcC-CCeEEEE-eeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccc
Q 036314 22 LHDDWVSAVDGSNPGFILTGCYDNLGRVWKA-GGVCTHI-LEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDA 99 (347)
Q Consensus 22 ~h~~~v~~~~~~~~~~l~sg~~d~~i~iw~~-~~~~~~~-l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~ 99 (347)
.|...+.+..+. ++++++++.|.++++|+. .+..+.. +.||.+.|.++++...+ ..|++||.|.++|+||..+
T Consensus 206 ~~~~~~~~~q~~-~~~~~~~s~~~tl~~~~~~~~~~i~~~l~GH~g~V~~l~~~~~~----~~lvsgS~D~t~rvWd~~s 280 (537)
T KOG0274|consen 206 TDDHVVLCLQLH-DGFFKSGSDDSTLHLWDLNNGYLILTRLVGHFGGVWGLAFPSGG----DKLVSGSTDKTERVWDCST 280 (537)
T ss_pred cCcchhhhheee-cCeEEecCCCceeEEeecccceEEEeeccCCCCCceeEEEecCC----CEEEEEecCCcEEeEecCC
Confidence 355666666665 779999999999999996 5666666 99999999999997522 3699999999999999888
Q ss_pred cccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccccccc
Q 036314 100 EELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAI 179 (347)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (347)
++ +..++.+|...|.++... ...+++||+|.+|++|+++++ .++
T Consensus 281 g~---------C~~~l~gh~stv~~~~~~--~~~~~sgs~D~tVkVW~v~n~-------------------------~~l 324 (537)
T KOG0274|consen 281 GE---------CTHSLQGHTSSVRCLTID--PFLLVSGSRDNTVKVWDVTNG-------------------------ACL 324 (537)
T ss_pred Cc---------EEEEecCCCceEEEEEcc--CceEeeccCCceEEEEeccCc-------------------------ceE
Confidence 75 567899999999988754 457888999999999999853 456
Q ss_pred ccccCCccceEEEEeCCCCeEEEEecCCcEEEEECCCCceeeeeeeC-eeeEEEEeeCCCCcEEEEecCCCcEEEEeCCC
Q 036314 180 STLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCG-KALNCIDIGGEGSALIAAGGSDPILRIWDPRK 258 (347)
Q Consensus 180 ~~~~~h~~~v~~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~ 258 (347)
..+.+|+.+|+++... +.++++|+.|++|++||+.+++++..+..+ ..+.++.+.+. ..+.+|+.|+.|++||++.
T Consensus 325 ~l~~~h~~~V~~v~~~-~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~~V~sl~~~~~--~~~~Sgs~D~~IkvWdl~~ 401 (537)
T KOG0274|consen 325 NLLRGHTGPVNCVQLD-EPLLVSGSYDGTVKVWDPRTGKCLKSLSGHTGRVYSLIVDSE--NRLLSGSLDTTIKVWDLRT 401 (537)
T ss_pred EEeccccccEEEEEec-CCEEEEEecCceEEEEEhhhceeeeeecCCcceEEEEEecCc--ceEEeeeeccceEeecCCc
Confidence 7778899999999875 789999999999999999999999988754 47888877543 5788999999999999985
Q ss_pred CCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecC-CCCeEEEEeecCCCEEEEccCCce
Q 036314 259 PGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDS-HKDKVLCADWWRGDSVISGGVDSK 337 (347)
Q Consensus 259 ~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~-h~~~v~~~~~~~~~~l~s~s~D~~ 337 (347)
.. ..+.++.+|...+..+.+.. .+|++++.|++|++||...++.+.++.+ |.+.|..+.+. ...+++++.|++
T Consensus 402 ~~--~c~~tl~~h~~~v~~l~~~~---~~Lvs~~aD~~Ik~WD~~~~~~~~~~~~~~~~~v~~l~~~-~~~il~s~~~~~ 475 (537)
T KOG0274|consen 402 KR--KCIHTLQGHTSLVSSLLLRD---NFLVSSSADGTIKLWDAEEGECLRTLEGRHVGGVSALALG-KEEILCSSDDGS 475 (537)
T ss_pred hh--hhhhhhcCCccccccccccc---ceeEeccccccEEEeecccCceeeeeccCCcccEEEeecC-cceEEEEecCCe
Confidence 41 45788999999998777643 3699999999999999999999999988 77888888875 457888899999
Q ss_pred EEEeecccC
Q 036314 338 LCVSSGVSI 346 (347)
Q Consensus 338 v~vw~~~~~ 346 (347)
+.+|+-.+-
T Consensus 476 ~~l~dl~~~ 484 (537)
T KOG0274|consen 476 VKLWDLRSG 484 (537)
T ss_pred eEEEecccC
Confidence 999987653
No 41
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=100.00 E-value=4.6e-32 Score=235.88 Aligned_cols=280 Identities=20% Similarity=0.287 Sum_probs=220.0
Q ss_pred CCCCcCCceeeccCCC-CCEEEEEecCCeEEEEcCCCe--E-EE------------------------------------
Q 036314 19 EPSLHDDWVSAVDGSN-PGFILTGCYDNLGRVWKAGGV--C-TH------------------------------------ 58 (347)
Q Consensus 19 ~~~~h~~~v~~~~~~~-~~~l~sg~~d~~i~iw~~~~~--~-~~------------------------------------ 58 (347)
.-.+|.-.++.+++++ |-|+|||-.-|+|||||..++ . ..
T Consensus 54 iYtEH~~~vtVAkySPsG~yiASGD~sG~vRIWdtt~~~hiLKnef~v~aG~I~Di~Wd~ds~RI~avGEGrerfg~~F~ 133 (603)
T KOG0318|consen 54 IYTEHAHQVTVAKYSPSGFYIASGDVSGKVRIWDTTQKEHILKNEFQVLAGPIKDISWDFDSKRIAAVGEGRERFGHVFL 133 (603)
T ss_pred eeccccceeEEEEeCCCceEEeecCCcCcEEEEeccCcceeeeeeeeecccccccceeCCCCcEEEEEecCccceeEEEE
Confidence 3558988899888985 559999999999999985321 1 11
Q ss_pred --------EeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCC
Q 036314 59 --------ILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETS 130 (347)
Q Consensus 59 --------~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~ 130 (347)
.+.||...|++++|-|... .+++|||+|++|.+|+=. +.+-..+++.|+..|+|+.|+||
T Consensus 134 ~DSG~SvGei~GhSr~ins~~~KpsRP---fRi~T~sdDn~v~ffeGP---------PFKFk~s~r~HskFV~~VRysPD 201 (603)
T KOG0318|consen 134 WDSGNSVGEITGHSRRINSVDFKPSRP---FRIATGSDDNTVAFFEGP---------PFKFKSSFREHSKFVNCVRYSPD 201 (603)
T ss_pred ecCCCccceeeccceeEeeeeccCCCc---eEEEeccCCCeEEEeeCC---------CeeeeecccccccceeeEEECCC
Confidence 2345666666666655432 367788888888887632 22333467789999999999999
Q ss_pred CCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccc---cCCccceEEEEe-CCCCeEEEEecC
Q 036314 131 GNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTL---VGHTQCVSSVVW-PQQETIYSASWD 206 (347)
Q Consensus 131 ~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~h~~~v~~~~~-~~~~~l~s~s~d 206 (347)
|.+++|++.||+|.+||-.+++ .+..+ .+|.+.|.++.| |++.+++++|.|
T Consensus 202 G~~Fat~gsDgki~iyDGktge-------------------------~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaD 256 (603)
T KOG0318|consen 202 GSRFATAGSDGKIYIYDGKTGE-------------------------KVGELEDSDAHKGSIFALSWSPDSTQFLTVSAD 256 (603)
T ss_pred CCeEEEecCCccEEEEcCCCcc-------------------------EEEEecCCCCccccEEEEEECCCCceEEEecCC
Confidence 9999999999999999876543 23333 479999999999 588999999999
Q ss_pred CcEEEEECCCCceeeeeeeCe-----eeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeC
Q 036314 207 HSVRTWDVEMGKDLSDIFCGK-----ALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWH 281 (347)
Q Consensus 207 g~v~vwd~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s 281 (347)
.++||||+.+.+.++++..+. .+.|+.- + ..|++-+.+|+|.++++..+ .+.+.+.||...|+++..+
T Consensus 257 kt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWq---k-d~lItVSl~G~in~ln~~d~---~~~~~i~GHnK~ITaLtv~ 329 (603)
T KOG0318|consen 257 KTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQ---K-DHLITVSLSGTINYLNPSDP---SVLKVISGHNKSITALTVS 329 (603)
T ss_pred ceEEEEEeeccceEEEeecCCchhceEEEEEEe---C-CeEEEEEcCcEEEEecccCC---ChhheecccccceeEEEEc
Confidence 999999999999888887543 3444432 2 35678889999999998754 3578899999999999999
Q ss_pred CCCCeEEEEEeCCCcEEEEEcCCCccceee-cCCCCeEEEEeecCCCEEEEccCCceEEEeec
Q 036314 282 NKSWFHLISASYDGKVMLWDLRTAWPLSVI-DSHKDKVLCADWWRGDSVISGGVDSKLCVSSG 343 (347)
Q Consensus 282 ~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~-~~h~~~v~~~~~~~~~~l~s~s~D~~v~vw~~ 343 (347)
|++. +|.||+.||.|.=||..++..-... ++|.+.|.+++-+....+.+.|+|.++++-+.
T Consensus 330 ~d~~-~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~~~~~ 391 (603)
T KOG0318|consen 330 PDGK-TIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAASESGELFTIGWDDTLRVISL 391 (603)
T ss_pred CCCC-EEEeeccCceEEEEecCCccccccccccccceEEEEeecCCCcEEEEecCCeEEEEec
Confidence 9995 5999999999999999988654433 78999999999876567889999999998754
No 42
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=100.00 E-value=4.4e-33 Score=231.89 Aligned_cols=245 Identities=21% Similarity=0.332 Sum_probs=213.0
Q ss_pred EEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEE
Q 036314 56 CTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVC 135 (347)
Q Consensus 56 ~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~ 135 (347)
..+.+.+|.+-|.++++-|.+ ..++|||.|++++|||+.++++ ..++.||...|..+++|+-..+++
T Consensus 143 l~rVi~gHlgWVr~vavdP~n----~wf~tgs~DrtikIwDlatg~L---------kltltGhi~~vr~vavS~rHpYlF 209 (460)
T KOG0285|consen 143 LYRVISGHLGWVRSVAVDPGN----EWFATGSADRTIKIWDLATGQL---------KLTLTGHIETVRGVAVSKRHPYLF 209 (460)
T ss_pred ehhhhhhccceEEEEeeCCCc----eeEEecCCCceeEEEEcccCeE---------EEeecchhheeeeeeecccCceEE
Confidence 456788999999999998853 4799999999999999998864 457889999999999999999999
Q ss_pred EeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEEC
Q 036314 136 SGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDV 214 (347)
Q Consensus 136 sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~ 214 (347)
+++.|+.|+-||++.. +.++.+-||-..|.++.. |.-+.|++++.|.++||||+
T Consensus 210 s~gedk~VKCwDLe~n-------------------------kvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDi 264 (460)
T KOG0285|consen 210 SAGEDKQVKCWDLEYN-------------------------KVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDI 264 (460)
T ss_pred EecCCCeeEEEechhh-------------------------hhHHHhccccceeEEEeccccceeEEecCCcceEEEeee
Confidence 9999999999999863 457888999999999985 66788999999999999999
Q ss_pred CCCceeeeeee-CeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeC
Q 036314 215 EMGKDLSDIFC-GKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASY 293 (347)
Q Consensus 215 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~ 293 (347)
++...+..+.. ..++..+.+.+.++ .+++|+-|++|++||++.+. ...++..|...|.++..+|.. +.+||+|.
T Consensus 265 Rtr~~V~~l~GH~~~V~~V~~~~~dp-qvit~S~D~tvrlWDl~agk---t~~tlt~hkksvral~lhP~e-~~fASas~ 339 (460)
T KOG0285|consen 265 RTRASVHVLSGHTNPVASVMCQPTDP-QVITGSHDSTVRLWDLRAGK---TMITLTHHKKSVRALCLHPKE-NLFASASP 339 (460)
T ss_pred cccceEEEecCCCCcceeEEeecCCC-ceEEecCCceEEEeeeccCc---eeEeeecccceeeEEecCCch-hhhhccCC
Confidence 99888888764 34677777766665 46799999999999998643 367788899999999999987 46999988
Q ss_pred CCcEEEEEcCCCccceeecCCCCeEEEEeecCCCEEEEccCCceEEEeecc
Q 036314 294 DGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 294 D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~D~~v~vw~~~ 344 (347)
| .|+-|++-.++.++.+.+|.+-+.+++-..+..+++|+..|.+.+|+.-
T Consensus 340 d-nik~w~~p~g~f~~nlsgh~~iintl~~nsD~v~~~G~dng~~~fwdwk 389 (460)
T KOG0285|consen 340 D-NIKQWKLPEGEFLQNLSGHNAIINTLSVNSDGVLVSGGDNGSIMFWDWK 389 (460)
T ss_pred c-cceeccCCccchhhccccccceeeeeeeccCceEEEcCCceEEEEEecC
Confidence 7 4899999999999999999999999998777799999999999999864
No 43
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=1e-31 Score=242.48 Aligned_cols=305 Identities=20% Similarity=0.330 Sum_probs=236.3
Q ss_pred ceEEEEEEeccCCCCcCCCCCcCCceeeccCC-CCCEEEEEecCCeEEEEcCC------------------------CeE
Q 036314 2 KVLEIEYIKAVAPQKEEEPSLHDDWVSAVDGS-NPGFILTGCYDNLGRVWKAG------------------------GVC 56 (347)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~------------------------~~~ 56 (347)
|++.+++.+.+ ..-...+|+++|.+.-|. +..-|.|.|.||.+-+|.-. +..
T Consensus 170 rl~~v~~~k~~---~~~~l~gHkd~VvacfF~~~~~~l~tvskdG~l~~W~~~~~P~~~~~~~kd~eg~~d~~~~~~~Ee 246 (893)
T KOG0291|consen 170 RLFGVDGNKNL---FTYALNGHKDYVVACFFGANSLDLYTVSKDGALFVWTCDLRPPELDKAEKDEEGSDDEEMDEDGEE 246 (893)
T ss_pred EEEEecccccc---ceEeccCCCcceEEEEeccCcceEEEEecCceEEEEEecCCCcccccccccccccccccccccchh
Confidence 56677777664 334577999999988887 45579999999999999422 111
Q ss_pred -----------EEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccC--------------------
Q 036314 57 -----------THILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNH-------------------- 105 (347)
Q Consensus 57 -----------~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~-------------------- 105 (347)
.+.|......|++.+|++. ...|++|=..|...+|++..-+++..
T Consensus 247 k~~~~~~~k~~k~~ln~~~~kvtaa~fH~~----t~~lvvgFssG~f~LyelP~f~lih~LSis~~~I~t~~~N~tGDWi 322 (893)
T KOG0291|consen 247 KTHKIFWYKTKKHYLNQNSSKVTAAAFHKG----TNLLVVGFSSGEFGLYELPDFNLIHSLSISDQKILTVSFNSTGDWI 322 (893)
T ss_pred hhcceEEEEEEeeeecccccceeeeeccCC----ceEEEEEecCCeeEEEecCCceEEEEeecccceeeEEEecccCCEE
Confidence 1224444578899999873 34788888888888888765443210
Q ss_pred ----cc----------ccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccc
Q 036314 106 ----PK----------KIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEE 171 (347)
Q Consensus 106 ----~~----------~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 171 (347)
.+ .-..+-...+|...+++++++|||+++++|+.||.|||||..++
T Consensus 323 A~g~~klgQLlVweWqsEsYVlKQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~Sg-------------------- 382 (893)
T KOG0291|consen 323 AFGCSKLGQLLVWEWQSESYVLKQQGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQSG-------------------- 382 (893)
T ss_pred EEcCCccceEEEEEeeccceeeeccccccceeeEEECCCCcEEEeccCCCcEEEEeccCc--------------------
Confidence 00 00111234689999999999999999999999999999998753
Q ss_pred ccccccccccccCCccceEEEEeC-CCCeEEEEecCCcEEEEECCCCceeeeeeeCe--eeEEEEeeCCCCcEEEEecCC
Q 036314 172 PQLEGEAISTLVGHTQCVSSVVWP-QQETIYSASWDHSVRTWDVEMGKDLSDIFCGK--ALNCIDIGGEGSALIAAGGSD 248 (347)
Q Consensus 172 ~~~~~~~~~~~~~h~~~v~~~~~~-~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~la~~~~d 248 (347)
-|+-++..|+..|..+.|. .++.++|.|.||+|+.||+...+..+++..+. ...|++..|.+ .++.+|+.|
T Consensus 383 -----fC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~QfscvavD~sG-elV~AG~~d 456 (893)
T KOG0291|consen 383 -----FCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSG-ELVCAGAQD 456 (893)
T ss_pred -----eEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecCCCceeeeEEEEcCCC-CEEEeeccc
Confidence 4677889999999999985 67789999999999999999888888776655 45788886554 577778777
Q ss_pred C-cEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCC-ccceeecCCCCeEEEEeecC-
Q 036314 249 P-ILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTA-WPLSVIDSHKDKVLCADWWR- 325 (347)
Q Consensus 249 ~-~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~-~~~~~~~~h~~~v~~~~~~~- 325 (347)
. .|.+|+...+ ..+-.++||.++|.++.|+|++. .|||+|+|.+||+||+=.. ....+++ +...|+.+.|+|
T Consensus 457 ~F~IfvWS~qTG---qllDiLsGHEgPVs~l~f~~~~~-~LaS~SWDkTVRiW~if~s~~~vEtl~-i~sdvl~vsfrPd 531 (893)
T KOG0291|consen 457 SFEIFVWSVQTG---QLLDILSGHEGPVSGLSFSPDGS-LLASGSWDKTVRIWDIFSSSGTVETLE-IRSDVLAVSFRPD 531 (893)
T ss_pred eEEEEEEEeecC---eeeehhcCCCCcceeeEEccccC-eEEeccccceEEEEEeeccCceeeeEe-eccceeEEEEcCC
Confidence 6 7999998742 34668899999999999999996 6999999999999998543 2344443 567899999986
Q ss_pred CCEEEEccCCceEEEeecc
Q 036314 326 GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 326 ~~~l~s~s~D~~v~vw~~~ 344 (347)
|+.||.+..||.|.+|+..
T Consensus 532 G~elaVaTldgqItf~d~~ 550 (893)
T KOG0291|consen 532 GKELAVATLDGQITFFDIK 550 (893)
T ss_pred CCeEEEEEecceEEEEEhh
Confidence 7789999999999999865
No 44
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=100.00 E-value=3.2e-33 Score=230.20 Aligned_cols=278 Identities=17% Similarity=0.225 Sum_probs=229.8
Q ss_pred CcCCceeeccCC-CCCEEEEEecCCeEEEEcC-CCeEE--------EEeeccCCceEEEEEeecCCCceEEEEEccCCCc
Q 036314 22 LHDDWVSAVDGS-NPGFILTGCYDNLGRVWKA-GGVCT--------HILEGHCGAVSSVNIIKSDGLKYVTVATASKDQT 91 (347)
Q Consensus 22 ~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~-~~~~~--------~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~ 91 (347)
+.+..+-|..|+ +++||+|||.||-|.+||. .|+.. ..|.-+..+|.|+.|+++. .+||+|+.||.
T Consensus 211 g~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDs----EMlAsGsqDGk 286 (508)
T KOG0275|consen 211 GQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDS----EMLASGSQDGK 286 (508)
T ss_pred ccccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccH----HHhhccCcCCc
Confidence 567788899999 5679999999999999995 45332 2366788999999999843 47999999999
Q ss_pred EEEEeccccccccCccccceeeeee-ccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccc
Q 036314 92 LRLWKFDAEELVNHPKKIRSFKILR-GHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVE 170 (347)
Q Consensus 92 v~~wd~~~~~~~~~~~~~~~~~~~~-~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~ 170 (347)
|++|.+.++.++. .|. +|+..|+|+.|+.|+..++|+|.|.++|+--+.+
T Consensus 287 IKvWri~tG~ClR---------rFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKS-------------------- 337 (508)
T KOG0275|consen 287 IKVWRIETGQCLR---------RFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKS-------------------- 337 (508)
T ss_pred EEEEEEecchHHH---------HhhhhhccCeeEEEEccCcchhhcccccceEEEecccc--------------------
Confidence 9999999987643 343 8999999999999999999999999999987654
Q ss_pred cccccccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeeee---CeeeEEEEeeCCCCcEEEEec
Q 036314 171 EPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFC---GKALNCIDIGGEGSALIAAGG 246 (347)
Q Consensus 171 ~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~la~~~ 246 (347)
+++++.++||+..|+...| ++|..++++|.||+|++|+.++.+++.++.. ..+++.+..-|.+...++.+-
T Consensus 338 -----GK~LKEfrGHsSyvn~a~ft~dG~~iisaSsDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCN 412 (508)
T KOG0275|consen 338 -----GKCLKEFRGHSSYVNEATFTDDGHHIISASSDGTVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCN 412 (508)
T ss_pred -----chhHHHhcCccccccceEEcCCCCeEEEecCCccEEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEc
Confidence 4678899999999999988 5788999999999999999999998877653 235677777677788888999
Q ss_pred CCCcEEEEeCCCCCCCCCeEEecCCC---CCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEee
Q 036314 247 SDPILRIWDPRKPGTSAPVFQFSSHN---SWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADW 323 (347)
Q Consensus 247 ~d~~i~iwd~~~~~~~~~~~~~~~h~---~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~ 323 (347)
..+++.+.++.. + .+..++... +...++..+|.|.+ +.+.++|+.+.-+.+..|....++.-|+..|.++.-
T Consensus 413 rsntv~imn~qG--Q--vVrsfsSGkREgGdFi~~~lSpkGew-iYcigED~vlYCF~~~sG~LE~tl~VhEkdvIGl~H 487 (508)
T KOG0275|consen 413 RSNTVYIMNMQG--Q--VVRSFSSGKREGGDFINAILSPKGEW-IYCIGEDGVLYCFSVLSGKLERTLPVHEKDVIGLTH 487 (508)
T ss_pred CCCeEEEEeccc--e--EEeeeccCCccCCceEEEEecCCCcE-EEEEccCcEEEEEEeecCceeeeeeccccccccccc
Confidence 999999998863 2 234443221 22345668999964 889999999999999999988999999999999998
Q ss_pred cC-CCEEEEccCCceEEEee
Q 036314 324 WR-GDSVISGGVDSKLCVSS 342 (347)
Q Consensus 324 ~~-~~~l~s~s~D~~v~vw~ 342 (347)
+| .+.||+=+.||.+++|-
T Consensus 488 HPHqNllAsYsEDgllKLWk 507 (508)
T KOG0275|consen 488 HPHQNLLASYSEDGLLKLWK 507 (508)
T ss_pred CcccchhhhhcccchhhhcC
Confidence 87 45799999999999994
No 45
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=100.00 E-value=1e-33 Score=239.14 Aligned_cols=243 Identities=24% Similarity=0.382 Sum_probs=204.9
Q ss_pred CCCcCCceeeccCC-CCCEEEEEecCCeEEEEcCCCeEEEEeeccC-CceEEEEEeecCCCceEEEEEccCCCcEEEEec
Q 036314 20 PSLHDDWVSAVDGS-NPGFILTGCYDNLGRVWKAGGVCTHILEGHC-GAVSSVNIIKSDGLKYVTVATASKDQTLRLWKF 97 (347)
Q Consensus 20 ~~~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~~~~~~~l~~h~-~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~ 97 (347)
.-.|+..|+++..+ ++.+++||..||.|++|++.-..++.+.+|. ..|.+++|+|.+. .++|+|+||+|+|||.
T Consensus 134 lQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmnnVk~~~ahh~eaIRdlafSpnDs----kF~t~SdDg~ikiWdf 209 (464)
T KOG0284|consen 134 LQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMNNVKIIQAHHAEAIRDLAFSPNDS----KFLTCSDDGTIKIWDF 209 (464)
T ss_pred hhhhcccceeEEEccCCCEEEEcCCCceEEecccchhhhHHhhHhhhhhhheeccCCCCc----eeEEecCCCeEEEEec
Confidence 44899999999977 6789999999999999998655566666655 8999999999544 4899999999999997
Q ss_pred cccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccccc
Q 036314 98 DAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGE 177 (347)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (347)
...+ .-..++||.--|.+++|+|...+++|||.|..|++||..+ +.
T Consensus 210 ~~~k---------ee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprS-------------------------g~ 255 (464)
T KOG0284|consen 210 RMPK---------EERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRS-------------------------GS 255 (464)
T ss_pred cCCc---------hhheeccCCCCcceeccCCccceeEEccCCceeEeecCCC-------------------------cc
Confidence 5432 2345789999999999999999999999999999999876 35
Q ss_pred ccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeee-eCeeeEEEEeeCCCCcEEEEecCCCcEEEEe
Q 036314 178 AISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIF-CGKALNCIDIGGEGSALIAAGGSDPILRIWD 255 (347)
Q Consensus 178 ~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd 255 (347)
++.++-+|...|..+.| +++++|+++|.|..++++|+++-+.+.... +.+.+.++.++|-...+|.+|+.||.|..|.
T Consensus 256 cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~ 335 (464)
T KOG0284|consen 256 CLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTYRGHKKDVTSLTWHPLNESLFTSGGSDGSVVHWV 335 (464)
T ss_pred hhhhhhhccceEEEEEEcCCCCeeEEccCCceEEEEehhHhHHHHHhhcchhhheeeccccccccceeeccCCCceEEEe
Confidence 67888999999999999 577899999999999999999766666665 4457899999998889999999999999998
Q ss_pred CCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcC
Q 036314 256 PRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLR 303 (347)
Q Consensus 256 ~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~ 303 (347)
+.... +... .-.+|...|.+++|+|-| .+|++|+.|.++++|.-.
T Consensus 336 v~~~~-p~~~-i~~AHd~~iwsl~~hPlG-hil~tgsnd~t~rfw~r~ 380 (464)
T KOG0284|consen 336 VGLEE-PLGE-IPPAHDGEIWSLAYHPLG-HILATGSNDRTVRFWTRN 380 (464)
T ss_pred ccccc-cccC-CCcccccceeeeeccccc-eeEeecCCCcceeeeccC
Confidence 76322 2111 224799999999999998 579999999999999643
No 46
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=100.00 E-value=1.5e-33 Score=238.44 Aligned_cols=278 Identities=22% Similarity=0.358 Sum_probs=219.8
Q ss_pred CCCcCCceeeccCCCC-CEEEEEecCCeEEEEcCCC-e--EEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEE
Q 036314 20 PSLHDDWVSAVDGSNP-GFILTGCYDNLGRVWKAGG-V--CTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLW 95 (347)
Q Consensus 20 ~~~h~~~v~~~~~~~~-~~l~sg~~d~~i~iw~~~~-~--~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~w 95 (347)
+..|.+.+..+.|-++ +.|+|||.|..|++|+..+ + ...+|.|..+.|+++.|.+++ .++++++.|+.+++|
T Consensus 171 ld~h~gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k~~~~~tLaGs~g~it~~d~d~~~----~~~iAas~d~~~r~W 246 (459)
T KOG0288|consen 171 LDAHEGEVHDVEFLRNSDTLATGGSDRIIKLWNVLGEKSELISTLAGSLGNITSIDFDSDN----KHVIAASNDKNLRLW 246 (459)
T ss_pred hhccccccceeEEccCcchhhhcchhhhhhhhhcccchhhhhhhhhccCCCcceeeecCCC----ceEEeecCCCceeee
Confidence 5579999999998754 7999999999999999643 3 356788999999999998743 468889999999999
Q ss_pred eccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccc
Q 036314 96 KFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLE 175 (347)
Q Consensus 96 d~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (347)
+++..+ ...+|.||++.|+++.|..+...+++|+.|.+||+||+....+...
T Consensus 247 nvd~~r---------~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt------------------- 298 (459)
T KOG0288|consen 247 NVDSLR---------LRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKAYCSKT------------------- 298 (459)
T ss_pred eccchh---------hhhhhcccccceeeehhhccccceeeccccchhhhhhhhhhheecc-------------------
Confidence 998754 4567899999999999988877799999999999999976433211
Q ss_pred ccccccccCCccceEEEEeCCCCeEEEEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEe
Q 036314 176 GEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWD 255 (347)
Q Consensus 176 ~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd 255 (347)
+- ....+..+... ...++|+..|++|+.||.+++.....+..+..+..+++..++ ..+.+++.|.++.+.|
T Consensus 299 ------~l-~~S~cnDI~~~-~~~~~SgH~DkkvRfwD~Rs~~~~~sv~~gg~vtSl~ls~~g-~~lLsssRDdtl~viD 369 (459)
T KOG0288|consen 299 ------VL-PGSQCNDIVCS-ISDVISGHFDKKVRFWDIRSADKTRSVPLGGRVTSLDLSMDG-LELLSSSRDDTLKVID 369 (459)
T ss_pred ------cc-ccccccceEec-ceeeeecccccceEEEeccCCceeeEeecCcceeeEeeccCC-eEEeeecCCCceeeee
Confidence 11 11122333322 345789999999999999999998888888899999997655 4566779999999999
Q ss_pred CCCCCCCCCeEEecCC----CCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCC-C-eEEEEeecC-CCE
Q 036314 256 PRKPGTSAPVFQFSSH----NSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHK-D-KVLCADWWR-GDS 328 (347)
Q Consensus 256 ~~~~~~~~~~~~~~~h----~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~-~-~v~~~~~~~-~~~ 328 (347)
++..+- ...+... ..-.+.+.|||++.| +|+||.||.|+||++.+++..+.+.... + .|++++|.+ |..
T Consensus 370 lRt~eI---~~~~sA~g~k~asDwtrvvfSpd~~Y-vaAGS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~ 445 (459)
T KOG0288|consen 370 LRTKEI---RQTFSAEGFKCASDWTRVVFSPDGSY-VAAGSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGSG 445 (459)
T ss_pred cccccE---EEEeeccccccccccceeEECCCCce-eeeccCCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCCch
Confidence 985321 2222111 112678999999975 9999999999999999999888876433 3 699999975 888
Q ss_pred EEEccCCceEEEee
Q 036314 329 VISGGVDSKLCVSS 342 (347)
Q Consensus 329 l~s~s~D~~v~vw~ 342 (347)
|++++.++.+++|.
T Consensus 446 Llsadk~~~v~lW~ 459 (459)
T KOG0288|consen 446 LLSADKQKAVTLWT 459 (459)
T ss_pred hhcccCCcceEecC
Confidence 99999999999995
No 47
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.4e-32 Score=250.34 Aligned_cols=275 Identities=21% Similarity=0.340 Sum_probs=223.0
Q ss_pred CceeeccCCCCC-EEEEEecCCeEEEEcCC-CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEecccccc
Q 036314 25 DWVSAVDGSNPG-FILTGCYDNLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEEL 102 (347)
Q Consensus 25 ~~v~~~~~~~~~-~l~sg~~d~~i~iw~~~-~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~ 102 (347)
..|..++|.+.+ .++++=..|.|++||-. +.++..|.+|.++|..+.|+|... .++||++|-.||+|++...
T Consensus 10 sRvKglsFHP~rPwILtslHsG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qp----lFVSGGDDykIkVWnYk~r-- 83 (1202)
T KOG0292|consen 10 SRVKGLSFHPKRPWILTSLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQP----LFVSGGDDYKIKVWNYKTR-- 83 (1202)
T ss_pred ccccceecCCCCCEEEEeecCceeeeehhhhhhHHhhhhccCCccceeeecCCCC----eEEecCCccEEEEEecccc--
Confidence 456678887654 88888899999999954 888889999999999999999654 6899999999999998765
Q ss_pred ccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccc
Q 036314 103 VNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTL 182 (347)
Q Consensus 103 ~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (347)
+++.++.||-+-|+.+.|++.-.+|+|+|.|.||+||+-.+ ++++..+
T Consensus 84 -------rclftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqs-------------------------r~~iavl 131 (1202)
T KOG0292|consen 84 -------RCLFTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQS-------------------------RKCIAVL 131 (1202)
T ss_pred -------eehhhhccccceeEEeeccCCCceEEEccCCCeEEEEeccC-------------------------CceEEEE
Confidence 46678899999999999999999999999999999999765 3568899
Q ss_pred cCCccceEEEEeC-CCCeEEEEecCCcEEEEECCCCce----------------------------eeeee--eCeeeEE
Q 036314 183 VGHTQCVSSVVWP-QQETIYSASWDHSVRTWDVEMGKD----------------------------LSDIF--CGKALNC 231 (347)
Q Consensus 183 ~~h~~~v~~~~~~-~~~~l~s~s~dg~v~vwd~~~~~~----------------------------~~~~~--~~~~~~~ 231 (347)
.||+..|.|..|. ..+.++|+|.|.+|||||+..-+. ++.+. +...++.
T Consensus 132 tGHnHYVMcAqFhptEDlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNw 211 (1202)
T KOG0292|consen 132 TGHNHYVMCAQFHPTEDLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNW 211 (1202)
T ss_pred ecCceEEEeeccCCccceEEEecccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccce
Confidence 9999999999984 477899999999999999742110 11111 1235777
Q ss_pred EEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceee
Q 036314 232 IDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVI 311 (347)
Q Consensus 232 ~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~ 311 (347)
.+|+|.- .+|++|++|..|++|.+...... .+-+..+|.+.|.++.|+|.-. +++|.|+|++|+|||+.+...+++|
T Consensus 212 aAfhpTl-pliVSG~DDRqVKlWrmnetKaW-EvDtcrgH~nnVssvlfhp~q~-lIlSnsEDksirVwDm~kRt~v~tf 288 (1202)
T KOG0292|consen 212 AAFHPTL-PLIVSGADDRQVKLWRMNETKAW-EVDTCRGHYNNVSSVLFHPHQD-LILSNSEDKSIRVWDMTKRTSVQTF 288 (1202)
T ss_pred EEecCCc-ceEEecCCcceeeEEEeccccce-eehhhhcccCCcceEEecCccc-eeEecCCCccEEEEecccccceeee
Confidence 8887743 38899999999999987643222 2345679999999999999763 7999999999999999999999999
Q ss_pred cCCCCeEEEEeecC-CCEEEEccCCceEEEe
Q 036314 312 DSHKDKVLCADWWR-GDSVISGGVDSKLCVS 341 (347)
Q Consensus 312 ~~h~~~v~~~~~~~-~~~l~s~s~D~~v~vw 341 (347)
....+.-|+++-+| .+.+|+ +.|+-+.|+
T Consensus 289 rrendRFW~laahP~lNLfAA-gHDsGm~VF 318 (1202)
T KOG0292|consen 289 RRENDRFWILAAHPELNLFAA-GHDSGMIVF 318 (1202)
T ss_pred eccCCeEEEEEecCCcceeee-ecCCceEEE
Confidence 87778899999887 455555 555544443
No 48
>PLN00181 protein SPA1-RELATED; Provisional
Probab=100.00 E-value=8.1e-31 Score=258.77 Aligned_cols=265 Identities=18% Similarity=0.282 Sum_probs=208.6
Q ss_pred CCeEEEEcCCCeE-EE-----EeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeec
Q 036314 44 DNLGRVWKAGGVC-TH-----ILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRG 117 (347)
Q Consensus 44 d~~i~iw~~~~~~-~~-----~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~ 117 (347)
+|.+++|+..... .. .+.+|.+.|.+++|++++ ..|++|+.|++|++|++....... .....+...+.
T Consensus 457 ~gl~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~fs~dg----~~latgg~D~~I~iwd~~~~~~~~-~~~~~~~~~~~- 530 (793)
T PLN00181 457 EGLCKYLSFSKLRVKADLKQGDLLNSSNLVCAIGFDRDG----EFFATAGVNKKIKIFECESIIKDG-RDIHYPVVELA- 530 (793)
T ss_pred hhhhhhhcccceEEEEeeccccccCCCCcEEEEEECCCC----CEEEEEeCCCEEEEEECCcccccc-cccccceEEec-
Confidence 6778888864321 11 244689999999999854 479999999999999975321000 00001122233
Q ss_pred cccceEEEEEeCC-CCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeC-
Q 036314 118 HKASVHSIAAETS-GNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP- 195 (347)
Q Consensus 118 h~~~V~~v~~s~~-~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~- 195 (347)
+...|.+++|++. +.+|++++.||+|++||+.+. ..+..+.+|...|.++.|.
T Consensus 531 ~~~~v~~l~~~~~~~~~las~~~Dg~v~lWd~~~~-------------------------~~~~~~~~H~~~V~~l~~~p 585 (793)
T PLN00181 531 SRSKLSGICWNSYIKSQVASSNFEGVVQVWDVARS-------------------------QLVTEMKEHEKRVWSIDYSS 585 (793)
T ss_pred ccCceeeEEeccCCCCEEEEEeCCCeEEEEECCCC-------------------------eEEEEecCCCCCEEEEEEcC
Confidence 3467899999874 789999999999999998753 2345678899999999994
Q ss_pred -CCCeEEEEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCC
Q 036314 196 -QQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSW 274 (347)
Q Consensus 196 -~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~ 274 (347)
++..|++++.|++|++||++++..+..+.....+.++.+.++++..+++|+.|+.|++||++... .+...+.+|...
T Consensus 586 ~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~--~~~~~~~~h~~~ 663 (793)
T PLN00181 586 ADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANICCVQFPSESGRSLAFGSADHKVYYYDLRNPK--LPLCTMIGHSKT 663 (793)
T ss_pred CCCCEEEEEcCCCEEEEEECCCCcEEEEEecCCCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCC--ccceEecCCCCC
Confidence 56789999999999999999988877776666788888877778899999999999999998532 245677899999
Q ss_pred eeEEEeCCCCCeEEEEEeCCCcEEEEEcCCC------ccceeecCCCCeEEEEeecC-CCEEEEccCCceEEEeec
Q 036314 275 ISACKWHNKSWFHLISASYDGKVMLWDLRTA------WPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKLCVSSG 343 (347)
Q Consensus 275 v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~------~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~D~~v~vw~~ 343 (347)
|.++.|. ++. .|++++.|++|++||++.+ .++.++.+|.+.+.++.|++ +.+||+|+.|++|+||+-
T Consensus 664 V~~v~f~-~~~-~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~~ 737 (793)
T PLN00181 664 VSYVRFV-DSS-TLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFVYHK 737 (793)
T ss_pred EEEEEEe-CCC-EEEEEECCCEEEEEeCCCCccccCCcceEEEcCCCCCeeEEEEcCCCCEEEEEeCCCEEEEEEC
Confidence 9999997 443 5999999999999999753 45778999999999999975 779999999999999984
No 49
>KOG0301 consensus Phospholipase A2-activating protein (contains WD40 repeats) [Lipid transport and metabolism]
Probab=100.00 E-value=6.3e-32 Score=241.93 Aligned_cols=275 Identities=23% Similarity=0.376 Sum_probs=219.4
Q ss_pred CCCCcCCceeeccCCCCCEEEEEecCCeEEEEcCCC-eE--EEEeeccCCceEE-EEEeecCCCceEEEEEccCCCcEEE
Q 036314 19 EPSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAGG-VC--THILEGHCGAVSS-VNIIKSDGLKYVTVATASKDQTLRL 94 (347)
Q Consensus 19 ~~~~h~~~v~~~~~~~~~~l~sg~~d~~i~iw~~~~-~~--~~~l~~h~~~V~~-v~~~~~~~~~~~~l~s~s~Dg~v~~ 94 (347)
...+|+..|.+++..++..++++|.||++++|+..+ .. .+.+.+|.+.|.. +.+.+. +...|++|+.|.++.+
T Consensus 9 ~l~gH~~DVr~v~~~~~~~i~s~sRd~t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~---~~~~l~~g~~D~~i~v 85 (745)
T KOG0301|consen 9 ELEGHKSDVRAVAVTDGVCIISGSRDGTVKVWAKKGKQYLETHAFEGPKGFIANSICYAES---DKGRLVVGGMDTTIIV 85 (745)
T ss_pred EeccCccchheeEecCCeEEeecCCCCceeeeeccCcccccceecccCcceeeccceeccc---cCcceEeecccceEEE
Confidence 467999999999988888999999999999998744 32 3568889888876 766652 2235899999999999
Q ss_pred EeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccc
Q 036314 95 WKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQL 174 (347)
Q Consensus 95 wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (347)
|.+... .++.+|.+|+..|.+++...++. ++|||+|.|+++|...
T Consensus 86 ~~~~~~---------~P~~~LkgH~snVC~ls~~~~~~-~iSgSWD~TakvW~~~------------------------- 130 (745)
T KOG0301|consen 86 FKLSQA---------EPLYTLKGHKSNVCSLSIGEDGT-LISGSWDSTAKVWRIG------------------------- 130 (745)
T ss_pred EecCCC---------CchhhhhccccceeeeecCCcCc-eEecccccceEEecch-------------------------
Confidence 998754 36778999999999998777777 8999999999999754
Q ss_pred cccccccccCCccceEEEEeCCCCeEEEEecCCcEEEEECCCCceeeeeeeC-eeeEEEEeeCCCCcEEEEecCCCcEEE
Q 036314 175 EGEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCG-KALNCIDIGGEGSALIAAGGSDPILRI 253 (347)
Q Consensus 175 ~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~la~~~~d~~i~i 253 (347)
++...+.+|+..|++++.-+.+.++|||.|++|++|.- ++.++++..+ ..+..+++-+. ..|++++.||.|++
T Consensus 131 --~l~~~l~gH~asVWAv~~l~e~~~vTgsaDKtIklWk~--~~~l~tf~gHtD~VRgL~vl~~--~~flScsNDg~Ir~ 204 (745)
T KOG0301|consen 131 --ELVYSLQGHTASVWAVASLPENTYVTGSADKTIKLWKG--GTLLKTFSGHTDCVRGLAVLDD--SHFLSCSNDGSIRL 204 (745)
T ss_pred --hhhcccCCcchheeeeeecCCCcEEeccCcceeeeccC--CchhhhhccchhheeeeEEecC--CCeEeecCCceEEE
Confidence 34456899999999998633348999999999999975 5666666644 35677777543 35789999999999
Q ss_pred EeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeecCCCEEEEcc
Q 036314 254 WDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGG 333 (347)
Q Consensus 254 wd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s 333 (347)
|++.. ..+..+.+|++.|.++...+++. .++|+++|+++++|+.. ++.+.++--+-.||++.+.+..-+++|+
T Consensus 205 w~~~g----e~l~~~~ghtn~vYsis~~~~~~-~Ivs~gEDrtlriW~~~--e~~q~I~lPttsiWsa~~L~NgDIvvg~ 277 (745)
T KOG0301|consen 205 WDLDG----EVLLEMHGHTNFVYSISMALSDG-LIVSTGEDRTLRIWKKD--ECVQVITLPTTSIWSAKVLLNGDIVVGG 277 (745)
T ss_pred EeccC----ceeeeeeccceEEEEEEecCCCC-eEEEecCCceEEEeecC--ceEEEEecCccceEEEEEeeCCCEEEec
Confidence 99852 23678889999999999555553 69999999999999987 5677765333489999886444568888
Q ss_pred CCceEEEeecc
Q 036314 334 VDSKLCVSSGV 344 (347)
Q Consensus 334 ~D~~v~vw~~~ 344 (347)
.||.||||+..
T Consensus 278 SDG~VrVfT~~ 288 (745)
T KOG0301|consen 278 SDGRVRVFTVD 288 (745)
T ss_pred cCceEEEEEec
Confidence 89999999854
No 50
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4.8e-32 Score=240.10 Aligned_cols=246 Identities=17% Similarity=0.310 Sum_probs=209.1
Q ss_pred EEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEe
Q 036314 58 HILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSG 137 (347)
Q Consensus 58 ~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sg 137 (347)
+.+..|+..|-++.++|-.. .++++-..|.|.||+.++.+. .+.+.-..-||++..|-.--+++++|
T Consensus 7 rk~~~rSdRVKsVd~HPteP----w~la~LynG~V~IWnyetqtm---------VksfeV~~~PvRa~kfiaRknWiv~G 73 (794)
T KOG0276|consen 7 RKFQSRSDRVKSVDFHPTEP----WILAALYNGDVQIWNYETQTM---------VKSFEVSEVPVRAAKFIARKNWIVTG 73 (794)
T ss_pred hHhhccCCceeeeecCCCCc----eEEEeeecCeeEEEeccccee---------eeeeeecccchhhheeeeccceEEEe
Confidence 34556899999999999544 577888999999999987654 34455568889999998888999999
Q ss_pred eCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCC
Q 036314 138 SWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEM 216 (347)
Q Consensus 138 s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~ 216 (347)
+.|..||||+..+. +.+.++..|.+.|++++. |...+++|+|.|-+|++||.+.
T Consensus 74 sDD~~IrVfnynt~-------------------------ekV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~ 128 (794)
T KOG0276|consen 74 SDDMQIRVFNYNTG-------------------------EKVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWEN 128 (794)
T ss_pred cCCceEEEEecccc-------------------------eeeEEeeccccceeeeeecCCCCeEEecCCccEEEEeeccC
Confidence 99999999998764 346788999999999985 7788999999999999999976
Q ss_pred Cceeeeee--eCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCC-CeEEEEEeC
Q 036314 217 GKDLSDIF--CGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKS-WFHLISASY 293 (347)
Q Consensus 217 ~~~~~~~~--~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~~~l~s~s~ 293 (347)
.-.....+ +.+.+++++|.|.+.+.+|+++.|++|++|.+.+ +.+.+++.+|...|+++.+-+.+ ..+|+||+.
T Consensus 129 ~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs---~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaD 205 (794)
T KOG0276|consen 129 EWACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGS---PHPNFTLEGHEKGVNCVDYYTGGDKPYLISGAD 205 (794)
T ss_pred ceeeeeEEcCcceEEEEEEecCCCccceeeeeccccEEEEEcCC---CCCceeeeccccCcceEEeccCCCcceEEecCC
Confidence 53333333 2357899999999999999999999999999875 45689999999999999987654 235999999
Q ss_pred CCcEEEEEcCCCccceeecCCCCeEEEEeecCC-CEEEEccCCceEEEeecc
Q 036314 294 DGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRG-DSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 294 D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~~-~~l~s~s~D~~v~vw~~~ 344 (347)
|.+|+|||..+..++++++||...|..+.|+|. ..++|||.||+|+||-..
T Consensus 206 D~tiKvWDyQtk~CV~TLeGHt~Nvs~v~fhp~lpiiisgsEDGTvriWhs~ 257 (794)
T KOG0276|consen 206 DLTIKVWDYQTKSCVQTLEGHTNNVSFVFFHPELPIIISGSEDGTVRIWNSK 257 (794)
T ss_pred CceEEEeecchHHHHHHhhcccccceEEEecCCCcEEEEecCCccEEEecCc
Confidence 999999999999999999999999999999874 479999999999999653
No 51
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.5e-32 Score=249.25 Aligned_cols=245 Identities=20% Similarity=0.370 Sum_probs=207.5
Q ss_pred eeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeC
Q 036314 60 LEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSW 139 (347)
Q Consensus 60 l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~ 139 (347)
|..-+..|-.++|+|... .++++-..|.|++||..-+++ +..|..|.+||+.++|+|++.+++||+.
T Consensus 5 fEskSsRvKglsFHP~rP----wILtslHsG~IQlWDYRM~tl---------i~rFdeHdGpVRgv~FH~~qplFVSGGD 71 (1202)
T KOG0292|consen 5 FESKSSRVKGLSFHPKRP----WILTSLHSGVIQLWDYRMGTL---------IDRFDEHDGPVRGVDFHPTQPLFVSGGD 71 (1202)
T ss_pred hhcccccccceecCCCCC----EEEEeecCceeeeehhhhhhH---------HhhhhccCCccceeeecCCCCeEEecCC
Confidence 455567788999999765 588999999999999987764 4467899999999999999999999999
Q ss_pred CCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeC-CCCeEEEEecCCcEEEEECCCCc
Q 036314 140 DCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP-QQETIYSASWDHSVRTWDVEMGK 218 (347)
Q Consensus 140 Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~l~s~s~dg~v~vwd~~~~~ 218 (347)
|..|++|+... ..++.++.||-+.|+.+.|+ .-..|+|+|.|.+|+||+..+.+
T Consensus 72 DykIkVWnYk~-------------------------rrclftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~ 126 (1202)
T KOG0292|consen 72 DYKIKVWNYKT-------------------------RRCLFTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRK 126 (1202)
T ss_pred ccEEEEEeccc-------------------------ceehhhhccccceeEEeeccCCCceEEEccCCCeEEEEeccCCc
Confidence 99999998764 35688999999999999984 56789999999999999999999
Q ss_pred eeeeeee-CeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCC-------CC-------------------CCCCeEEecCC
Q 036314 219 DLSDIFC-GKALNCIDIGGEGSALIAAGGSDPILRIWDPRK-------PG-------------------TSAPVFQFSSH 271 (347)
Q Consensus 219 ~~~~~~~-~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~-------~~-------------------~~~~~~~~~~h 271 (347)
++..+.. .+.++|..|+|.. .++++++.|.+||+||+.. ++ ...-.+.+.||
T Consensus 127 ~iavltGHnHYVMcAqFhptE-DlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGH 205 (1202)
T KOG0292|consen 127 CIAVLTGHNHYVMCAQFHPTE-DLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGH 205 (1202)
T ss_pred eEEEEecCceEEEeeccCCcc-ceEEEecccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeeccc
Confidence 9887764 4689999998754 4889999999999999742 00 00112467899
Q ss_pred CCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCC--ccceeecCCCCeEEEEeecC-CCEEEEccCCceEEEeecc
Q 036314 272 NSWISACKWHNKSWFHLISASYDGKVMLWDLRTA--WPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 272 ~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~--~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~D~~v~vw~~~ 344 (347)
...|+-++|+|.-+ +++||+.|..|++|.++.- ..+.+..||.+.|.|+.|+| .+.+.|.|.|++|+||+..
T Consensus 206 DRGVNwaAfhpTlp-liVSG~DDRqVKlWrmnetKaWEvDtcrgH~nnVssvlfhp~q~lIlSnsEDksirVwDm~ 280 (1202)
T KOG0292|consen 206 DRGVNWAAFHPTLP-LIVSGADDRQVKLWRMNETKAWEVDTCRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMT 280 (1202)
T ss_pred ccccceEEecCCcc-eEEecCCcceeeEEEeccccceeehhhhcccCCcceEEecCccceeEecCCCccEEEEecc
Confidence 99999999999875 6999999999999998753 44667889999999999987 4579999999999999976
No 52
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=8.7e-32 Score=246.38 Aligned_cols=243 Identities=22% Similarity=0.338 Sum_probs=187.8
Q ss_pred CcCCCCCcCCceeeccCC-CCCEEEEEecCCeEEEEcCCC----------------------------------------
Q 036314 16 KEEEPSLHDDWVSAVDGS-NPGFILTGCYDNLGRVWKAGG---------------------------------------- 54 (347)
Q Consensus 16 ~~~~~~~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~~---------------------------------------- 54 (347)
..++..+|++.|+++.|| +|.||||||.|+.||||.+-.
T Consensus 259 ~Qe~~~ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~ 338 (712)
T KOG0283|consen 259 VQEISNAHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSS 338 (712)
T ss_pred eeccccccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccccc
Confidence 445556999999999999 677999999999999996321
Q ss_pred -------e--------------EEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceee
Q 036314 55 -------V--------------CTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFK 113 (347)
Q Consensus 55 -------~--------------~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~ 113 (347)
. ....|.||.+.|..|.|+..+ +|+|+|+|.|||||.+...+ +++
T Consensus 339 ~~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn~-----fLLSSSMDKTVRLWh~~~~~---------CL~ 404 (712)
T KOG0283|consen 339 SRKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKNN-----FLLSSSMDKTVRLWHPGRKE---------CLK 404 (712)
T ss_pred cccccCCccccCCCccccccccchhhhhccchhheecccccCC-----eeEeccccccEEeecCCCcc---------eee
Confidence 0 113477999999999998743 69999999999999987654 455
Q ss_pred eeeccccceEEEEEeC-CCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEE
Q 036314 114 ILRGHKASVHSIAAET-SGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSV 192 (347)
Q Consensus 114 ~~~~h~~~V~~v~~s~-~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 192 (347)
.| .|.+-|+||+|+| |.++|+|||-||.||||++.+... -.+..-.+-|+++
T Consensus 405 ~F-~HndfVTcVaFnPvDDryFiSGSLD~KvRiWsI~d~~V--------------------------v~W~Dl~~lITAv 457 (712)
T KOG0283|consen 405 VF-SHNDFVTCVAFNPVDDRYFISGSLDGKVRLWSISDKKV--------------------------VDWNDLRDLITAV 457 (712)
T ss_pred EE-ecCCeeEEEEecccCCCcEeecccccceEEeecCcCee--------------------------EeehhhhhhheeE
Confidence 55 5999999999999 568999999999999999876321 1111122568888
Q ss_pred Ee-CCCCeEEEEecCCcEEEEECCCCceeeeee--e-------CeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCC
Q 036314 193 VW-PQQETIYSASWDHSVRTWDVEMGKDLSDIF--C-------GKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTS 262 (347)
Q Consensus 193 ~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~--~-------~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~ 262 (347)
+| |+|+..+.|+.+|.+++|++...+...... . +..++.+.+.|.+...+++.+.|..|||||.+..
T Consensus 458 cy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~--- 534 (712)
T KOG0283|consen 458 CYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHNKKKKQGKRITGLQFFPGDPDEVLVTSNDSRIRIYDGRDK--- 534 (712)
T ss_pred EeccCCceEEEEEeccEEEEEEccCCeEEEeeeEeeccCccccCceeeeeEecCCCCCeEEEecCCCceEEEeccch---
Confidence 87 789999999999999999998766544332 1 2368888888766666677789999999999642
Q ss_pred CCeEEecCCCCC--eeEEEeCCCCCeEEEEEeCCCcEEEEEcC
Q 036314 263 APVFQFSSHNSW--ISACKWHNKSWFHLISASYDGKVMLWDLR 303 (347)
Q Consensus 263 ~~~~~~~~h~~~--v~~v~~s~~~~~~l~s~s~D~~i~lwd~~ 303 (347)
..+..|.|+.+. -....|+.||. +|+++++|..|.||+..
T Consensus 535 ~lv~KfKG~~n~~SQ~~Asfs~Dgk-~IVs~seDs~VYiW~~~ 576 (712)
T KOG0283|consen 535 DLVHKFKGFRNTSSQISASFSSDGK-HIVSASEDSWVYIWKND 576 (712)
T ss_pred hhhhhhcccccCCcceeeeEccCCC-EEEEeecCceEEEEeCC
Confidence 234555555442 24567888886 59999999999999974
No 53
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=100.00 E-value=6.7e-31 Score=242.64 Aligned_cols=250 Identities=27% Similarity=0.480 Sum_probs=204.7
Q ss_pred EEEeecc-CCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEE
Q 036314 57 THILEGH-CGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVC 135 (347)
Q Consensus 57 ~~~l~~h-~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~ 135 (347)
...+.+| ...|.++.|++++ ..+++++.|+.+++|+....+. .....+.+|...|.+++|+|++++++
T Consensus 151 ~~~~~~~~~~sv~~~~fs~~g----~~l~~~~~~~~i~~~~~~~~~~-------~~~~~l~~h~~~v~~~~fs~d~~~l~ 219 (456)
T KOG0266|consen 151 EQTLAGHECPSVTCVDFSPDG----RALAAASSDGLIRIWKLEGIKS-------NLLRELSGHTRGVSDVAFSPDGSYLL 219 (456)
T ss_pred eeeecccccCceEEEEEcCCC----CeEEEccCCCcEEEeecccccc-------hhhccccccccceeeeEECCCCcEEE
Confidence 3445554 7889999999954 3699999999999999854431 23445689999999999999999999
Q ss_pred EeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEEC
Q 036314 136 SGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDV 214 (347)
Q Consensus 136 sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~ 214 (347)
+++.|++|+|||+... +..++++.+|...|++++| +.++.++||+.|++|++||+
T Consensus 220 s~s~D~tiriwd~~~~------------------------~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~ 275 (456)
T KOG0266|consen 220 SGSDDKTLRIWDLKDD------------------------GRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDV 275 (456)
T ss_pred EecCCceEEEeeccCC------------------------CeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEec
Confidence 9999999999998432 3457789999999999999 56789999999999999999
Q ss_pred CCCceeeeeeeC-eeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCC--eeEEEeCCCCCeEEEEE
Q 036314 215 EMGKDLSDIFCG-KALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSW--ISACKWHNKSWFHLISA 291 (347)
Q Consensus 215 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~--v~~v~~s~~~~~~l~s~ 291 (347)
+++++...+..+ ..+.+++|.++ ++.+++++.|+.|++||+...... ....+.++... +.++.|+|++. +|+++
T Consensus 276 ~~~~~~~~l~~hs~~is~~~f~~d-~~~l~s~s~d~~i~vwd~~~~~~~-~~~~~~~~~~~~~~~~~~fsp~~~-~ll~~ 352 (456)
T KOG0266|consen 276 RTGECVRKLKGHSDGISGLAFSPD-GNLLVSASYDGTIRVWDLETGSKL-CLKLLSGAENSAPVTSVQFSPNGK-YLLSA 352 (456)
T ss_pred cCCeEEEeeeccCCceEEEEECCC-CCEEEEcCCCccEEEEECCCCcee-eeecccCCCCCCceeEEEECCCCc-EEEEe
Confidence 999988888754 47889999654 567888899999999999753210 23455566655 89999999996 59999
Q ss_pred eCCCcEEEEEcCCCccceeecCCCCeEEEE---eec-CCCEEEEccCCceEEEeecc
Q 036314 292 SYDGKVMLWDLRTAWPLSVIDSHKDKVLCA---DWW-RGDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 292 s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~---~~~-~~~~l~s~s~D~~v~vw~~~ 344 (347)
+.|+++++||++.+..+..+.+|...++|. ..+ .+..+.+|+.|+.|.+|+-.
T Consensus 353 ~~d~~~~~w~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~sg~~d~~v~~~~~~ 409 (456)
T KOG0266|consen 353 SLDRTLKLWDLRSGKSVGTYTGHSNLVRCIFSPTLSTGGKLIYSGSEDGSVYVWDSS 409 (456)
T ss_pred cCCCeEEEEEccCCcceeeecccCCcceeEecccccCCCCeEEEEeCCceEEEEeCC
Confidence 999999999999999999999998875443 222 47789999999999999865
No 54
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=4.2e-31 Score=238.46 Aligned_cols=290 Identities=19% Similarity=0.290 Sum_probs=229.6
Q ss_pred CCCcCCceeeccCCCCCEEEEEecCCeEEEEcCC-CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEecc
Q 036314 20 PSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFD 98 (347)
Q Consensus 20 ~~~h~~~v~~~~~~~~~~l~sg~~d~~i~iw~~~-~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~ 98 (347)
..||...|.+++++++..++..+..+.+++|+.. .+|.+++..- -+.+..|.|.+ .++++|...|.+.+||+.
T Consensus 369 ~~GHR~dVRsl~vS~d~~~~~Sga~~SikiWn~~t~kciRTi~~~--y~l~~~Fvpgd----~~Iv~G~k~Gel~vfdla 442 (888)
T KOG0306|consen 369 IGGHRSDVRSLCVSSDSILLASGAGESIKIWNRDTLKCIRTITCG--YILASKFVPGD----RYIVLGTKNGELQVFDLA 442 (888)
T ss_pred eccchhheeEEEeecCceeeeecCCCcEEEEEccCcceeEEeccc--cEEEEEecCCC----ceEEEeccCCceEEEEee
Confidence 4589999999999987766555567899999975 7888877644 57788888844 479999999999999998
Q ss_pred ccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCC-CCccceeeeccCCCcccccccccc
Q 036314 99 AEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDA-AGNQVSIKKRKGNNQVEEPQLEGE 177 (347)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 177 (347)
+..+ +.+.++|++.+.+++.+||++.+++||.|.+|++||..-... .+...... .-.
T Consensus 443 S~~l---------~Eti~AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~l-------------sl~ 500 (888)
T KOG0306|consen 443 SASL---------VETIRAHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVL-------------SLK 500 (888)
T ss_pred hhhh---------hhhhhccccceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCcccceee-------------eec
Confidence 7653 345679999999999999999999999999999998642111 00000000 000
Q ss_pred ccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeeeeCe-eeEEEEeeCCCCcEEEEecCCCcEEEEe
Q 036314 178 AISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGK-ALNCIDIGGEGSALIAAGGSDPILRIWD 255 (347)
Q Consensus 178 ~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~la~~~~d~~i~iwd 255 (347)
..+++. -++.|.++.+ |++++|+.+-.|++++||=+.+-+-...+..++ |+.|+++++ ++.++++|+.|.+|++|-
T Consensus 501 ~~rtLe-l~ddvL~v~~Spdgk~LaVsLLdnTVkVyflDtlKFflsLYGHkLPV~smDIS~-DSklivTgSADKnVKiWG 578 (888)
T KOG0306|consen 501 HTRTLE-LEDDVLCVSVSPDGKLLAVSLLDNTVKVYFLDTLKFFLSLYGHKLPVLSMDISP-DSKLIVTGSADKNVKIWG 578 (888)
T ss_pred cceEEe-ccccEEEEEEcCCCcEEEEEeccCeEEEEEecceeeeeeecccccceeEEeccC-CcCeEEeccCCCceEEec
Confidence 011221 2356778876 688899999999999999887765555555444 899999965 567899999999999999
Q ss_pred CCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeec-CCCEEEEccC
Q 036314 256 PRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWW-RGDSVISGGV 334 (347)
Q Consensus 256 ~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~-~~~~l~s~s~ 334 (347)
+.-+.. ...+-+|.+.|.++.|.|+. +++.|++.|+.|+-||-.+.+.++.+.+|...|+|++-+ +|.+++|+|.
T Consensus 579 LdFGDC---HKS~fAHdDSvm~V~F~P~~-~~FFt~gKD~kvKqWDg~kFe~iq~L~~H~~ev~cLav~~~G~~vvs~sh 654 (888)
T KOG0306|consen 579 LDFGDC---HKSFFAHDDSVMSVQFLPKT-HLFFTCGKDGKVKQWDGEKFEEIQKLDGHHSEVWCLAVSPNGSFVVSSSH 654 (888)
T ss_pred cccchh---hhhhhcccCceeEEEEcccc-eeEEEecCcceEEeechhhhhhheeeccchheeeeeEEcCCCCeEEeccC
Confidence 875433 45666899999999999976 579999999999999999999999999999999999986 5889999999
Q ss_pred CceEEEeec
Q 036314 335 DSKLCVSSG 343 (347)
Q Consensus 335 D~~v~vw~~ 343 (347)
|.+|++|.-
T Consensus 655 D~sIRlwE~ 663 (888)
T KOG0306|consen 655 DKSIRLWER 663 (888)
T ss_pred CceeEeeec
Confidence 999999963
No 55
>KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only]
Probab=100.00 E-value=2.7e-31 Score=245.25 Aligned_cols=253 Identities=24% Similarity=0.451 Sum_probs=208.1
Q ss_pred CCCcCCceeeccCCC-CCEEEEEecCCeEEEEcC-CCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEec
Q 036314 20 PSLHDDWVSAVDGSN-PGFILTGCYDNLGRVWKA-GGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKF 97 (347)
Q Consensus 20 ~~~h~~~v~~~~~~~-~~~l~sg~~d~~i~iw~~-~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~ 97 (347)
+.||.+.|+++++.. +.+|++|+.|.++|+||. .|.|++++.+|+..|.++...+ ..+++||.|.+|++|++
T Consensus 245 l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C~~~l~gh~stv~~~~~~~------~~~~sgs~D~tVkVW~v 318 (537)
T KOG0274|consen 245 LVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGECTHSLQGHTSSVRCLTIDP------FLLVSGSRDNTVKVWDV 318 (537)
T ss_pred ccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCcEEEEecCCCceEEEEEccC------ceEeeccCCceEEEEec
Confidence 679999999999874 679999999999999996 5899999999999999998755 35788999999999999
Q ss_pred cccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccccc
Q 036314 98 DAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGE 177 (347)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (347)
+++. .+.++.+|.++|+++.++ +.++++|+.|++|++||+.. ++
T Consensus 319 ~n~~---------~l~l~~~h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~~-------------------------~~ 362 (537)
T KOG0274|consen 319 TNGA---------CLNLLRGHTGPVNCVQLD--EPLLVSGSYDGTVKVWDPRT-------------------------GK 362 (537)
T ss_pred cCcc---------eEEEeccccccEEEEEec--CCEEEEEecCceEEEEEhhh-------------------------ce
Confidence 8764 566788899999999987 78999999999999999874 46
Q ss_pred ccccccCCccceEEEEeCCCCeEEEEecCCcEEEEECCCC-ceeeeeeeCee-eEEEEeeCCCCcEEEEecCCCcEEEEe
Q 036314 178 AISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMG-KDLSDIFCGKA-LNCIDIGGEGSALIAAGGSDPILRIWD 255 (347)
Q Consensus 178 ~~~~~~~h~~~v~~~~~~~~~~l~s~s~dg~v~vwd~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~la~~~~d~~i~iwd 255 (347)
++.++.+|+..|.++.+.....+++|+.|++|++||+++. +++..+..+.. +..+.+ ..+++.+++.|++|++||
T Consensus 363 cl~sl~gH~~~V~sl~~~~~~~~~Sgs~D~~IkvWdl~~~~~c~~tl~~h~~~v~~l~~---~~~~Lvs~~aD~~Ik~WD 439 (537)
T KOG0274|consen 363 CLKSLSGHTGRVYSLIVDSENRLLSGSLDTTIKVWDLRTKRKCIHTLQGHTSLVSSLLL---RDNFLVSSSADGTIKLWD 439 (537)
T ss_pred eeeeecCCcceEEEEEecCcceEEeeeeccceEeecCCchhhhhhhhcCCccccccccc---ccceeEeccccccEEEee
Confidence 7889999999999997643388999999999999999998 78777765443 334433 235788999999999999
Q ss_pred CCCCCCCCCeEEecC-CCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCC-CeEEEEee
Q 036314 256 PRKPGTSAPVFQFSS-HNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHK-DKVLCADW 323 (347)
Q Consensus 256 ~~~~~~~~~~~~~~~-h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~-~~v~~~~~ 323 (347)
....+ .+..+.+ |...|.++.+. + ..+++++.|+++++||++.++....+..+. .....+++
T Consensus 440 ~~~~~---~~~~~~~~~~~~v~~l~~~-~--~~il~s~~~~~~~l~dl~~~~~~~~l~~~~~~~~~~~~~ 503 (537)
T KOG0274|consen 440 AEEGE---CLRTLEGRHVGGVSALALG-K--EEILCSSDDGSVKLWDLRSGTLIRTLLSTDLGATWGVAP 503 (537)
T ss_pred cccCc---eeeeeccCCcccEEEeecC-c--ceEEEEecCCeeEEEecccCchhhhhhhccccccccccc
Confidence 87533 3667777 67889888886 1 358999999999999999998877664443 33344554
No 56
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=4.5e-31 Score=208.55 Aligned_cols=243 Identities=24% Similarity=0.289 Sum_probs=199.9
Q ss_pred eEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEE
Q 036314 55 VCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMV 134 (347)
Q Consensus 55 ~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l 134 (347)
+..+++..|+++|.++.|..++ .+.++++.|.+||+|+...+. .+++..+|...|..++.+.|+..|
T Consensus 8 kr~~~l~~~qgaV~avryN~dG----nY~ltcGsdrtvrLWNp~rg~---------liktYsghG~EVlD~~~s~Dnskf 74 (307)
T KOG0316|consen 8 KRLSILDCAQGAVRAVRYNVDG----NYCLTCGSDRTVRLWNPLRGA---------LIKTYSGHGHEVLDAALSSDNSKF 74 (307)
T ss_pred hhceeecccccceEEEEEccCC----CEEEEcCCCceEEeecccccc---------eeeeecCCCceeeecccccccccc
Confidence 3456789999999999997744 478999999999999976654 567889999999999999999999
Q ss_pred EEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeCC-CCeEEEEecCCcEEEEE
Q 036314 135 CSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQ-QETIYSASWDHSVRTWD 213 (347)
Q Consensus 135 ~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~dg~v~vwd 213 (347)
++|+.|..|.+||++++ +.++.+.+|...|+.+.|.+ ...++|||.|.++++||
T Consensus 75 ~s~GgDk~v~vwDV~TG-------------------------kv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wD 129 (307)
T KOG0316|consen 75 ASCGGDKAVQVWDVNTG-------------------------KVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWD 129 (307)
T ss_pred ccCCCCceEEEEEcccC-------------------------eeeeecccccceeeEEEecCcceEEEeccccceeEEEE
Confidence 99999999999999864 45778999999999999975 45689999999999999
Q ss_pred CCCC--ceeeeeee-CeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEE
Q 036314 214 VEMG--KDLSDIFC-GKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLIS 290 (347)
Q Consensus 214 ~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s 290 (347)
.++. +++..+.. ...+..+++. ...|++|+.||++|.||+|.+.. ... --..+|+++.|++++.. ++.
T Consensus 130 CRS~s~ePiQildea~D~V~Si~v~---~heIvaGS~DGtvRtydiR~G~l---~sD--y~g~pit~vs~s~d~nc-~La 200 (307)
T KOG0316|consen 130 CRSRSFEPIQILDEAKDGVSSIDVA---EHEIVAGSVDGTVRTYDIRKGTL---SSD--YFGHPITSVSFSKDGNC-SLA 200 (307)
T ss_pred cccCCCCccchhhhhcCceeEEEec---ccEEEeeccCCcEEEEEeeccee---ehh--hcCCcceeEEecCCCCE-EEE
Confidence 9764 33333322 2356777763 35788999999999999996421 122 23457999999999975 777
Q ss_pred EeCCCcEEEEEcCCCccceeecCCCCeEEEEeec---CCCEEEEccCCceEEEeecc
Q 036314 291 ASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWW---RGDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 291 ~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~---~~~~l~s~s~D~~v~vw~~~ 344 (347)
++.|+++++.|-++|+.++.+.||++.-+.++.. ....+++||.||.|.+|+.+
T Consensus 201 ~~l~stlrLlDk~tGklL~sYkGhkn~eykldc~l~qsdthV~sgSEDG~Vy~wdLv 257 (307)
T KOG0316|consen 201 SSLDSTLRLLDKETGKLLKSYKGHKNMEYKLDCCLNQSDTHVFSGSEDGKVYFWDLV 257 (307)
T ss_pred eeccceeeecccchhHHHHHhcccccceeeeeeeecccceeEEeccCCceEEEEEec
Confidence 8999999999999999999999999887766553 35579999999999999976
No 57
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=100.00 E-value=4.2e-31 Score=226.40 Aligned_cols=262 Identities=21% Similarity=0.322 Sum_probs=209.4
Q ss_pred eeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCc-cccceeeeeeccccceEEEEEeCCC-CEEEEe
Q 036314 60 LEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHP-KKIRSFKILRGHKASVHSIAAETSG-NMVCSG 137 (347)
Q Consensus 60 l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~-~~~~~~~~~~~h~~~V~~v~~s~~~-~~l~sg 137 (347)
.-.|.+.|+.++..|... ..+|+.+..+.|.|||+..-.-.... ...++-.+|.+|++.-.+++|++.. -.++++
T Consensus 120 ~i~h~gEVnRaRymPQnp---~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~ 196 (422)
T KOG0264|consen 120 KINHDGEVNRARYMPQNP---NIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSG 196 (422)
T ss_pred eccCCccchhhhhCCCCC---cEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeec
Confidence 346999999999999765 47899999999999998754322111 1334555789999988889998875 488999
Q ss_pred eCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeC--CCCeEEEEecCCcEEEEECC
Q 036314 138 SWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP--QQETIYSASWDHSVRTWDVE 215 (347)
Q Consensus 138 s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~l~s~s~dg~v~vwd~~ 215 (347)
+.|++|.+||+......... -.....+.+|+..|..++|. ....+++++.|+.+.|||+|
T Consensus 197 ~~d~~i~lwdi~~~~~~~~~------------------~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R 258 (422)
T KOG0264|consen 197 SDDHTICLWDINAESKEDKV------------------VDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTR 258 (422)
T ss_pred cCCCcEEEEeccccccCCcc------------------ccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcC
Confidence 99999999998754321110 12234678899999999984 44578999999999999999
Q ss_pred CC--ceeeeee-eCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEe
Q 036314 216 MG--KDLSDIF-CGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISAS 292 (347)
Q Consensus 216 ~~--~~~~~~~-~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s 292 (347)
++ +..+... +..++.|++|.|-+..+||+|+.|++|++||+|+... ++.++.+|.+.|..|.|+|.....|||++
T Consensus 259 ~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~--~lh~~e~H~dev~~V~WSPh~etvLASSg 336 (422)
T KOG0264|consen 259 SNTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNK--PLHTFEGHEDEVFQVEWSPHNETVLASSG 336 (422)
T ss_pred CCCCCCcccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhccc--CceeccCCCcceEEEEeCCCCCceeEecc
Confidence 53 3323332 3568999999999999999999999999999997543 68899999999999999999999999999
Q ss_pred CCCcEEEEEcCCC--------------ccceeecCCCCeEEEEeecC--CCEEEEccCCceEEEeecc
Q 036314 293 YDGKVMLWDLRTA--------------WPLSVIDSHKDKVLCADWWR--GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 293 ~D~~i~lwd~~~~--------------~~~~~~~~h~~~v~~~~~~~--~~~l~s~s~D~~v~vw~~~ 344 (347)
.|++++|||+..- +.+....||++.|..+.|.| ...|+|++.|+.+.||+-.
T Consensus 337 ~D~rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s 404 (422)
T KOG0264|consen 337 TDRRLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMA 404 (422)
T ss_pred cCCcEEEEeccccccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeecc
Confidence 9999999999752 12356789999999999986 3369999999999999865
No 58
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.98 E-value=2.3e-31 Score=212.33 Aligned_cols=241 Identities=21% Similarity=0.352 Sum_probs=196.7
Q ss_pred cCCceeeccCC--CCCEEEEEecCCeEEEEcCC--CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEecc
Q 036314 23 HDDWVSAVDGS--NPGFILTGCYDNLGRVWKAG--GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFD 98 (347)
Q Consensus 23 h~~~v~~~~~~--~~~~l~sg~~d~~i~iw~~~--~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~ 98 (347)
-.+.+-.++.+ ..+.+++++.||.+||||.+ ...++.++.|..+|.++.+.+..+ ..++++|.|++||+|+..
T Consensus 59 ~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~~s~Pi~~~kEH~~EV~Svdwn~~~r---~~~ltsSWD~TiKLW~~~ 135 (311)
T KOG0277|consen 59 TEDGLFDVAWSENHENQVIAASGDGSLRLFDLTMPSKPIHKFKEHKREVYSVDWNTVRR---RIFLTSSWDGTIKLWDPN 135 (311)
T ss_pred cccceeEeeecCCCcceEEEEecCceEEEeccCCCCcchhHHHhhhhheEEeccccccc---eeEEeeccCCceEeecCC
Confidence 35667777766 35689999999999999964 456788999999999999987644 467788999999999975
Q ss_pred ccccccCccccceeeeeeccccceEEEEEeCC-CCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccccc
Q 036314 99 AEELVNHPKKIRSFKILRGHKASVHSIAAETS-GNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGE 177 (347)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~-~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (347)
-+ ..+.++.||..-|..++|+|. .++++++|.|++.++||++.. ++
T Consensus 136 r~---------~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~------------------------gk 182 (311)
T KOG0277|consen 136 RP---------NSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSP------------------------GK 182 (311)
T ss_pred CC---------cceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCC------------------------Cc
Confidence 43 456789999999999999985 589999999999999998653 11
Q ss_pred ccccccCCccceEEEEeC--CCCeEEEEecCCcEEEEECCCCc-eeeeeeeC-eeeEEEEeeCCCCcEEEEecCCCcEEE
Q 036314 178 AISTLVGHTQCVSSVVWP--QQETIYSASWDHSVRTWDVEMGK-DLSDIFCG-KALNCIDIGGEGSALIAAGGSDPILRI 253 (347)
Q Consensus 178 ~~~~~~~h~~~v~~~~~~--~~~~l~s~s~dg~v~vwd~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~la~~~~d~~i~i 253 (347)
.+ .+..|...+.+.-|+ +...|++++-|+.|++||++.-+ ++..+..+ -.+..+.++|....++|++++|-+++|
T Consensus 183 ~~-~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~ri 261 (311)
T KOG0277|consen 183 FM-SIEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFELNGHGLAVRKVKFSPHHASLLASASYDMTVRI 261 (311)
T ss_pred ee-EEEeccceeEeecccccCCcEEEecCCCceEEEEehhhccccceeecCCceEEEEEecCcchhhHhhhccccceEEe
Confidence 12 256788888888885 56789999999999999998643 34445433 368899999888889999999999999
Q ss_pred EeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEc
Q 036314 254 WDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDL 302 (347)
Q Consensus 254 wd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~ 302 (347)
||...+. ..+.+...|+..|..+.||+-.+.++|+++.|+.+.||+.
T Consensus 262 w~~~~~d--s~~e~~~~HtEFv~g~Dws~~~~~~vAs~gWDe~l~Vw~p 308 (311)
T KOG0277|consen 262 WDPERQD--SAIETVDHHTEFVCGLDWSLFDPGQVASTGWDELLYVWNP 308 (311)
T ss_pred cccccch--hhhhhhhccceEEeccccccccCceeeecccccceeeecc
Confidence 9987543 2355667899999999999988888999999999999985
No 59
>PTZ00421 coronin; Provisional
Probab=99.98 E-value=1.4e-29 Score=233.33 Aligned_cols=268 Identities=18% Similarity=0.208 Sum_probs=193.2
Q ss_pred CceeeccCC-CCCEEEEEecCCeEEEEcCCCe-EE-------------EEeeccCCceEEEEEeecCCCceEEEEEccCC
Q 036314 25 DWVSAVDGS-NPGFILTGCYDNLGRVWKAGGV-CT-------------HILEGHCGAVSSVNIIKSDGLKYVTVATASKD 89 (347)
Q Consensus 25 ~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~~~-~~-------------~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~D 89 (347)
..|+....+ ++..+++++.+..+..|+..|. .+ ..+.+|.+.|.+++|+|.++ ..|++|+.|
T Consensus 21 ~~i~~~~~~~d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~---~~LaSgS~D 97 (493)
T PTZ00421 21 LNVTPSTALWDCSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDP---QKLFTASED 97 (493)
T ss_pred eccccccccCCCCCcEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCC---CEEEEEeCC
Confidence 344444444 3456788888888888875432 21 14789999999999998432 369999999
Q ss_pred CcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCC-CEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCc
Q 036314 90 QTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSG-NMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQ 168 (347)
Q Consensus 90 g~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~-~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~ 168 (347)
++|++||+..+.... ....++..+.+|...|.+++|+|++ ++|++++.|++|+|||++++
T Consensus 98 gtIkIWdi~~~~~~~--~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg----------------- 158 (493)
T PTZ00421 98 GTIMGWGIPEEGLTQ--NISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERG----------------- 158 (493)
T ss_pred CEEEEEecCCCcccc--ccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCC-----------------
Confidence 999999997643211 1123456788999999999999986 69999999999999998753
Q ss_pred cccccccccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeeeeCe--eeEEEEeeCCCCcEEEEe
Q 036314 169 VEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGK--ALNCIDIGGEGSALIAAG 245 (347)
Q Consensus 169 ~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~la~~ 245 (347)
..+..+.+|...|.++.| +++..|++++.|++|++||+++++.+..+..+. ....+.+.+++..++++|
T Consensus 159 --------~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~~~~~ivt~G 230 (493)
T PTZ00421 159 --------KAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLWAKRKDLIITLG 230 (493)
T ss_pred --------eEEEEEcCCCCceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEEEecCCCCcceEEEEcCCCCeEEEEe
Confidence 234466789999999998 578889999999999999999988777665432 223445555555455444
Q ss_pred ---cCCCcEEEEeCCCCCCCCCeEEecCCC-CCeeEEEeCCCCCeEEEEEe-CCCcEEEEEcCCCccceeecC-CCCeEE
Q 036314 246 ---GSDPILRIWDPRKPGTSAPVFQFSSHN-SWISACKWHNKSWFHLISAS-YDGKVMLWDLRTAWPLSVIDS-HKDKVL 319 (347)
Q Consensus 246 ---~~d~~i~iwd~~~~~~~~~~~~~~~h~-~~v~~v~~s~~~~~~l~s~s-~D~~i~lwd~~~~~~~~~~~~-h~~~v~ 319 (347)
+.|+.|++||++.... +......+. ..+....|++++.. |++++ .|+.|++||+++++....... +...+.
T Consensus 231 ~s~s~Dr~VklWDlr~~~~--p~~~~~~d~~~~~~~~~~d~d~~~-L~lggkgDg~Iriwdl~~~~~~~~~~~~s~~~~~ 307 (493)
T PTZ00421 231 CSKSQQRQIMLWDTRKMAS--PYSTVDLDQSSALFIPFFDEDTNL-LYIGSKGEGNIRCFELMNERLTFCSSYSSVEPHK 307 (493)
T ss_pred cCCCCCCeEEEEeCCCCCC--ceeEeccCCCCceEEEEEcCCCCE-EEEEEeCCCeEEEEEeeCCceEEEeeccCCCCCc
Confidence 3589999999986432 333333333 34566778998865 66555 699999999998877665433 345566
Q ss_pred EEeecC
Q 036314 320 CADWWR 325 (347)
Q Consensus 320 ~~~~~~ 325 (347)
+++|.|
T Consensus 308 g~~~~p 313 (493)
T PTZ00421 308 GLCMMP 313 (493)
T ss_pred ceEecc
Confidence 777754
No 60
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.98 E-value=1.2e-29 Score=229.32 Aligned_cols=280 Identities=21% Similarity=0.354 Sum_probs=218.2
Q ss_pred CcCCceeeccCC-CCCEEEEEecC-CeEEEEcCC-CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEecc
Q 036314 22 LHDDWVSAVDGS-NPGFILTGCYD-NLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFD 98 (347)
Q Consensus 22 ~h~~~v~~~~~~-~~~~l~sg~~d-~~i~iw~~~-~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~ 98 (347)
.-...|.++.++ .|+.||-||.. |++-+|+.. ...+...+||-..+++++.+|++ ..+|||++||.||+||..
T Consensus 305 is~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsYVlKQQgH~~~i~~l~YSpDg----q~iaTG~eDgKVKvWn~~ 380 (893)
T KOG0291|consen 305 ISDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESYVLKQQGHSDRITSLAYSPDG----QLIATGAEDGKVKVWNTQ 380 (893)
T ss_pred cccceeeEEEecccCCEEEEcCCccceEEEEEeeccceeeeccccccceeeEEECCCC----cEEEeccCCCcEEEEecc
Confidence 334667788876 67899998876 799999864 34566688999999999999944 579999999999999987
Q ss_pred ccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccc
Q 036314 99 AEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEA 178 (347)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (347)
++- |+.+|..|++.|+.+.|+..|+.+++.|.||+||.||+.... .
T Consensus 381 Sgf---------C~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYr-------------------------N 426 (893)
T KOG0291|consen 381 SGF---------CFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYR-------------------------N 426 (893)
T ss_pred Cce---------EEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccc-------------------------e
Confidence 764 678899999999999999999999999999999999986532 1
Q ss_pred cccccCCc-cceEEEEe-CCCCeEEEEecCC-cEEEEECCCCceeeeeeeC-eeeEEEEeeCCCCcEEEEecCCCcEEEE
Q 036314 179 ISTLVGHT-QCVSSVVW-PQQETIYSASWDH-SVRTWDVEMGKDLSDIFCG-KALNCIDIGGEGSALIAAGGSDPILRIW 254 (347)
Q Consensus 179 ~~~~~~h~-~~v~~~~~-~~~~~l~s~s~dg-~v~vwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~la~~~~d~~i~iw 254 (347)
.+++.... -...+++. |.|+.+..|+.|. .|.+|++++|+.+-.+..+ .++.++.|++.+ .++++++.|.+||+|
T Consensus 427 fRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~-~~LaS~SWDkTVRiW 505 (893)
T KOG0291|consen 427 FRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDG-SLLASGSWDKTVRIW 505 (893)
T ss_pred eeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeEEcccc-CeEEeccccceEEEE
Confidence 23333322 12345555 4577777777776 4899999999987777654 478999997654 589999999999999
Q ss_pred eCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecC--------------------C
Q 036314 255 DPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDS--------------------H 314 (347)
Q Consensus 255 d~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~--------------------h 314 (347)
|+-.... ..-++ .+..-+..++|.|+|.. |+++..||.|.+||+..+..+..+.+ .
T Consensus 506 ~if~s~~--~vEtl-~i~sdvl~vsfrPdG~e-laVaTldgqItf~d~~~~~q~~~IdgrkD~~~gR~~~D~~ta~~sa~ 581 (893)
T KOG0291|consen 506 DIFSSSG--TVETL-EIRSDVLAVSFRPDGKE-LAVATLDGQITFFDIKEAVQVGSIDGRKDLSGGRKETDRITAENSAK 581 (893)
T ss_pred EeeccCc--eeeeE-eeccceeEEEEcCCCCe-EEEEEecceEEEEEhhhceeeccccchhhccccccccceeehhhccc
Confidence 9875322 22333 35667899999999975 99999999999999987654432221 1
Q ss_pred CCeEEEEeec-CCCEEEEccCCceEEEeecc
Q 036314 315 KDKVLCADWW-RGDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 315 ~~~v~~~~~~-~~~~l~s~s~D~~v~vw~~~ 344 (347)
......+.|+ +|..+++||..+.||+++.+
T Consensus 582 ~K~Ftti~ySaDG~~IlAgG~sn~iCiY~v~ 612 (893)
T KOG0291|consen 582 GKTFTTICYSADGKCILAGGESNSICIYDVP 612 (893)
T ss_pred CCceEEEEEcCCCCEEEecCCcccEEEEECc
Confidence 2346788897 68899999999999999876
No 61
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.98 E-value=1.6e-30 Score=224.56 Aligned_cols=272 Identities=20% Similarity=0.281 Sum_probs=215.8
Q ss_pred CCceeeccCCC--C-CEEEEEecCCeEEEEcCCCe-EEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccc
Q 036314 24 DDWVSAVDGSN--P-GFILTGCYDNLGRVWKAGGV-CTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDA 99 (347)
Q Consensus 24 ~~~v~~~~~~~--~-~~l~sg~~d~~i~iw~~~~~-~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~ 99 (347)
.+.|++++|++ + ++.+|+|. .++||+..+. ..+.+......|.++.|-. ++..||+|.+.|.|++||+.+
T Consensus 26 ~~~vssl~fsp~~P~d~aVt~S~--rvqly~~~~~~~~k~~srFk~~v~s~~fR~----DG~LlaaGD~sG~V~vfD~k~ 99 (487)
T KOG0310|consen 26 HNSVSSLCFSPKHPYDFAVTSSV--RVQLYSSVTRSVRKTFSRFKDVVYSVDFRS----DGRLLAAGDESGHVKVFDMKS 99 (487)
T ss_pred cCcceeEecCCCCCCceEEeccc--EEEEEecchhhhhhhHHhhccceeEEEeec----CCeEEEccCCcCcEEEecccc
Confidence 46799999984 3 46666664 7889986543 3345666778899999977 445799999999999999654
Q ss_pred cccccCccccceeeeeeccccceEEEEEeCCC-CEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccc
Q 036314 100 EELVNHPKKIRSFKILRGHKASVHSIAAETSG-NMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEA 178 (347)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~-~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (347)
.. .+..+.+|+.+|+.+.|+|++ ..+++|+.|+.+++||+.+. ..
T Consensus 100 r~---------iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a-------------------------~v 145 (487)
T KOG0310|consen 100 RV---------ILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTA-------------------------YV 145 (487)
T ss_pred HH---------HHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCc-------------------------EE
Confidence 32 345678999999999999875 57789999999999998752 22
Q ss_pred cccccCCccceEEEEeC--CCCeEEEEecCCcEEEEECCCC-ceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEe
Q 036314 179 ISTLVGHTQCVSSVVWP--QQETIYSASWDHSVRTWDVEMG-KDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWD 255 (347)
Q Consensus 179 ~~~~~~h~~~v~~~~~~--~~~~l~s~s~dg~v~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd 255 (347)
...+.+|+++|++..|. ++..++|||+||+|++||++.. ..+..+.++.++..+.+-|++ .+||+++ .+.+++||
T Consensus 146 ~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~elnhg~pVe~vl~lpsg-s~iasAg-Gn~vkVWD 223 (487)
T KOG0310|consen 146 QAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVELNHGCPVESVLALPSG-SLIASAG-GNSVKVWD 223 (487)
T ss_pred EEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCceeEEecCCCceeeEEEcCCC-CEEEEcC-CCeEEEEE
Confidence 34778999999999984 3457999999999999999886 777888888899888776654 4667665 57899999
Q ss_pred CCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeecCCC-EEEEccC
Q 036314 256 PRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGD-SVISGGV 334 (347)
Q Consensus 256 ~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~ 334 (347)
+-.+++ .+..+..|...|+|+++..++. .|+||+.|+.+++||+.+-+.+..+.. .++|++++.+|++ .++.|..
T Consensus 224 l~~G~q--ll~~~~~H~KtVTcL~l~s~~~-rLlS~sLD~~VKVfd~t~~Kvv~s~~~-~~pvLsiavs~dd~t~viGms 299 (487)
T KOG0310|consen 224 LTTGGQ--LLTSMFNHNKTVTCLRLASDST-RLLSGSLDRHVKVFDTTNYKVVHSWKY-PGPVLSIAVSPDDQTVVIGMS 299 (487)
T ss_pred ecCCce--ehhhhhcccceEEEEEeecCCc-eEeecccccceEEEEccceEEEEeeec-ccceeeEEecCCCceEEEecc
Confidence 975443 2444556999999999999885 599999999999999887777777764 7899999998754 6889989
Q ss_pred CceEEEe
Q 036314 335 DSKLCVS 341 (347)
Q Consensus 335 D~~v~vw 341 (347)
||.+.+-
T Consensus 300 nGlv~~r 306 (487)
T KOG0310|consen 300 NGLVSIR 306 (487)
T ss_pred cceeeee
Confidence 9988765
No 62
>KOG0300 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.97 E-value=3.8e-30 Score=211.57 Aligned_cols=291 Identities=22% Similarity=0.358 Sum_probs=222.9
Q ss_pred CCCCcCCceeeccCCC-CCEEEEEecCCeEEEEcCC-CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEe
Q 036314 19 EPSLHDDWVSAVDGSN-PGFILTGCYDNLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWK 96 (347)
Q Consensus 19 ~~~~h~~~v~~~~~~~-~~~l~sg~~d~~i~iw~~~-~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd 96 (347)
+..||++.|+.++... ..++.|+|.|.+.+||.++ |.|+..+.||.+.|++|+|++++ ..++++|.|++..||.
T Consensus 143 e~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~----~L~lTaSGD~taHIW~ 218 (481)
T KOG0300|consen 143 ELEGHKDGIWHVAADSTQPICGTASADHTARIWSLESGACLATYTGHTGSVNSIKFHNSG----LLLLTASGDETAHIWK 218 (481)
T ss_pred hhcccccceeeehhhcCCcceeecccccceeEEeeccccceeeecccccceeeEEecccc----ceEEEccCCcchHHHH
Confidence 3569999999998653 3489999999999999974 89999999999999999999844 4789999999999997
Q ss_pred c------ccccc------------cc-------------CccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEE
Q 036314 97 F------DAEEL------------VN-------------HPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISL 145 (347)
Q Consensus 97 ~------~~~~~------------~~-------------~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~i 145 (347)
. ..+.. .. .+.-..++..|.+|.+.|.+..|-..|+.++++|+|.+..+
T Consensus 219 ~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnl 298 (481)
T KOG0300|consen 219 AAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTANL 298 (481)
T ss_pred HhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeecccccee
Confidence 3 21100 00 00011345578899999999999889999999999999999
Q ss_pred EecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEE-eCCCCeEEEEecCCcEEEEECCCCcee-eee
Q 036314 146 WRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVV-WPQQETIYSASWDHSVRTWDVEMGKDL-SDI 223 (347)
Q Consensus 146 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~-~~~~~~l~s~s~dg~v~vwd~~~~~~~-~~~ 223 (347)
||++++ ..+..+.||.....-+. .|.++.+++.|.|.++++||.+....- ..+
T Consensus 299 wDVEtg-------------------------e~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFReaI~sV~VF 353 (481)
T KOG0300|consen 299 WDVETG-------------------------EVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREAIQSVAVF 353 (481)
T ss_pred eeeccC-------------------------ceeccccCcchhccccccCCcceEEEEeccCceeEeccchhhcceeeee
Confidence 999875 34567788887776554 466777899999999999999854322 223
Q ss_pred ee-CeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEc
Q 036314 224 FC-GKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDL 302 (347)
Q Consensus 224 ~~-~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~ 302 (347)
+. ...++...|..++ .+++|++|.+|++||+++... ++.++. -.+.++.++.+..+ ..+|--..+..|+|||+
T Consensus 354 QGHtdtVTS~vF~~dd--~vVSgSDDrTvKvWdLrNMRs--plATIR-tdS~~NRvavs~g~-~iIAiPhDNRqvRlfDl 427 (481)
T KOG0300|consen 354 QGHTDTVTSVVFNTDD--RVVSGSDDRTVKVWDLRNMRS--PLATIR-TDSPANRVAVSKGH-PIIAIPHDNRQVRLFDL 427 (481)
T ss_pred cccccceeEEEEecCC--ceeecCCCceEEEeeeccccC--cceeee-cCCccceeEeecCC-ceEEeccCCceEEEEec
Confidence 32 2357777785543 578999999999999986533 344442 44567888887655 35777778889999999
Q ss_pred CCCcc----ceeecCCCCeEEEEeec---CCCEEEEccCCceEEEeecc
Q 036314 303 RTAWP----LSVIDSHKDKVLCADWW---RGDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 303 ~~~~~----~~~~~~h~~~v~~~~~~---~~~~l~s~s~D~~v~vw~~~ 344 (347)
+.... -..-++|...|.|++|. |-+-|.++|.|..+.=|..+
T Consensus 428 nG~RlaRlPrtsRqgHrRMV~c~AW~eehp~cnLftcGFDR~v~gW~in 476 (481)
T KOG0300|consen 428 NGNRLARLPRTSRQGHRRMVTCCAWLEEHPACNLFTCGFDRMVAGWKIN 476 (481)
T ss_pred CCCccccCCcccccccceeeeeeeccccCcccccccccccceeeeeEec
Confidence 85422 22347999999999996 45569999999999999765
No 63
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=99.97 E-value=1.2e-28 Score=193.87 Aligned_cols=286 Identities=22% Similarity=0.313 Sum_probs=220.1
Q ss_pred CCcCCceeeccCC-CCCEEEEEecCCeEEEEcC------C-C---------eEEEEeeccCCceEEEEEeecCCCceEEE
Q 036314 21 SLHDDWVSAVDGS-NPGFILTGCYDNLGRVWKA------G-G---------VCTHILEGHCGAVSSVNIIKSDGLKYVTV 83 (347)
Q Consensus 21 ~~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~------~-~---------~~~~~l~~h~~~V~~v~~~~~~~~~~~~l 83 (347)
...+..|.+++|. .+++-+.||...+.||-.- . + ...+.-+.|.+.|.+.+|+|.+ ..|
T Consensus 29 l~dsqairav~fhp~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~g----eli 104 (350)
T KOG0641|consen 29 LEDSQAIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPCG----ELI 104 (350)
T ss_pred ecchhheeeEEecCCCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecCcc----CeE
Confidence 3567889999997 5778889998899998631 1 0 0112345789999999999954 479
Q ss_pred EEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCC----CCEEEEee-CCCcEEEEecCCCCCCCccc
Q 036314 84 ATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETS----GNMVCSGS-WDCTISLWRTNDSDAAGNQV 158 (347)
Q Consensus 84 ~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~----~~~l~sgs-~Dg~I~iwd~~~~~~~~~~~ 158 (347)
++||+|.+|++--++..++-.. ..--.|.-|.+.|+.++|-.+ +..|++++ .|+.|.+=|...
T Consensus 105 atgsndk~ik~l~fn~dt~~~~----g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~-------- 172 (350)
T KOG0641|consen 105 ATGSNDKTIKVLPFNADTCNAT----GHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGR-------- 172 (350)
T ss_pred EecCCCceEEEEeccccccccc----CcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCC--------
Confidence 9999999999988775543221 111246779999999999543 45666654 466666666543
Q ss_pred eeeeccCCCccccccccccccccccCCccceEEEEeCCCCeEEEEecCCcEEEEECCCCceeeeeee--------CeeeE
Q 036314 159 SIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFC--------GKALN 230 (347)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~--------~~~~~ 230 (347)
++.+..+.+|++-|.++..=++-++++|+.|.+|+.||++-+.++..+.. ...+.
T Consensus 173 -----------------g~~~~a~sghtghilalyswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessava 235 (350)
T KOG0641|consen 173 -----------------GQGFHALSGHTGHILALYSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVA 235 (350)
T ss_pred -----------------CCcceeecCCcccEEEEEEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeE
Confidence 34466788999999888633668999999999999999998888776632 13567
Q ss_pred EEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCC----c
Q 036314 231 CIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTA----W 306 (347)
Q Consensus 231 ~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~----~ 306 (347)
.+++.| .++++++|..|....+||++. .++++.+..|...|.++.|+|.. ++|++||+|-.|++=|+..- .
T Consensus 236 av~vdp-sgrll~sg~~dssc~lydirg---~r~iq~f~phsadir~vrfsp~a-~yllt~syd~~ikltdlqgdla~el 310 (350)
T KOG0641|consen 236 AVAVDP-SGRLLASGHADSSCMLYDIRG---GRMIQRFHPHSADIRCVRFSPGA-HYLLTCSYDMKIKLTDLQGDLAHEL 310 (350)
T ss_pred EEEECC-CcceeeeccCCCceEEEEeeC---CceeeeeCCCccceeEEEeCCCc-eEEEEecccceEEEeecccchhhcC
Confidence 777765 467999999999999999985 34688999999999999999987 56999999999999998632 2
Q ss_pred cceeecCCCCeEEEEeecCCC-EEEEccCCceEEEeecc
Q 036314 307 PLSVIDSHKDKVLCADWWRGD-SVISGGVDSKLCVSSGV 344 (347)
Q Consensus 307 ~~~~~~~h~~~v~~~~~~~~~-~l~s~s~D~~v~vw~~~ 344 (347)
++.+...|++++..+.|+|.. .+++.|.|.++.+|..+
T Consensus 311 ~~~vv~ehkdk~i~~rwh~~d~sfisssadkt~tlwa~~ 349 (350)
T KOG0641|consen 311 PIMVVAEHKDKAIQCRWHPQDFSFISSSADKTATLWALN 349 (350)
T ss_pred ceEEEEeccCceEEEEecCccceeeeccCcceEEEeccC
Confidence 334456799999999999866 59999999999999864
No 64
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.97 E-value=2.6e-29 Score=205.22 Aligned_cols=277 Identities=21% Similarity=0.323 Sum_probs=207.1
Q ss_pred CCcCCCCCcCCceeeccCCC--CCEEEEEecCCeEEEEcCC--CeE-EEEeeccCCceEEEEEeecCCCceEEEEEccCC
Q 036314 15 QKEEEPSLHDDWVSAVDGSN--PGFILTGCYDNLGRVWKAG--GVC-THILEGHCGAVSSVNIIKSDGLKYVTVATASKD 89 (347)
Q Consensus 15 ~~~~~~~~h~~~v~~~~~~~--~~~l~sg~~d~~i~iw~~~--~~~-~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~D 89 (347)
+..+.+...++.|.+++||+ +.+++.||+|++||+|++. |.. -+....|.++|.++.|+.++ ..+++|+.|
T Consensus 18 kd~ev~~pP~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~Wsddg----skVf~g~~D 93 (347)
T KOG0647|consen 18 KDYEVPNPPEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDG----SKVFSGGCD 93 (347)
T ss_pred cceecCCCcccchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCC----ceEEeeccC
Confidence 44556777889999999996 4578899999999999864 322 35577899999999999854 368999999
Q ss_pred CcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCC--CEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCC
Q 036314 90 QTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSG--NMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNN 167 (347)
Q Consensus 90 g~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~--~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~ 167 (347)
+++++||+.+++. ..+..|.++|.++.|-+.. ..|+|||+|+|||.||.+....
T Consensus 94 k~~k~wDL~S~Q~----------~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~p-------------- 149 (347)
T KOG0647|consen 94 KQAKLWDLASGQV----------SQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNP-------------- 149 (347)
T ss_pred CceEEEEccCCCe----------eeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCe--------------
Confidence 9999999998753 3567899999999986654 4899999999999999875321
Q ss_pred ccccccccccccccccCCccceEEEEeCCCCeEEEEecCCcEEEEECCCCcee-eeee--eCeeeEEEEeeCCCCcEEEE
Q 036314 168 QVEEPQLEGEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDL-SDIF--CGKALNCIDIGGEGSALIAA 244 (347)
Q Consensus 168 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~la~ 244 (347)
+.++.-. +.++++.. ...+++.+..++.|.+|+++.+... +.+. ....+.|+++..+.. ..|.
T Consensus 150 -----------v~t~~LP-eRvYa~Dv-~~pm~vVata~r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~-~~al 215 (347)
T KOG0647|consen 150 -----------VATLQLP-ERVYAADV-LYPMAVVATAERHIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKD-GFAL 215 (347)
T ss_pred -----------eeeeecc-ceeeehhc-cCceeEEEecCCcEEEEEcCCCcchhhhhcCcccceeeEEEEEecCC-ceEe
Confidence 1111111 12222211 2346777888999999999765322 2221 234577888876554 4488
Q ss_pred ecCCCcEEEEeCCCCCCCCCeEEecCCCC---------CeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCC
Q 036314 245 GGSDPILRIWDPRKPGTSAPVFQFSSHNS---------WISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHK 315 (347)
Q Consensus 245 ~~~d~~i~iwd~~~~~~~~~~~~~~~h~~---------~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~ 315 (347)
|+-.|.+.+..+..+.+ ..-++|..|.. .|++++|+|.-+ .|+|++.||++..||-.....+++.+.|.
T Consensus 216 GsiEGrv~iq~id~~~~-~~nFtFkCHR~~~~~~~~VYaVNsi~FhP~hg-tlvTaGsDGtf~FWDkdar~kLk~s~~~~ 293 (347)
T KOG0647|consen 216 GSIEGRVAIQYIDDPNP-KDNFTFKCHRSTNSVNDDVYAVNSIAFHPVHG-TLVTAGSDGTFSFWDKDARTKLKTSETHP 293 (347)
T ss_pred eeecceEEEEecCCCCc-cCceeEEEeccCCCCCCceEEecceEeecccc-eEEEecCCceEEEecchhhhhhhccCcCC
Confidence 99999999998876433 45677777773 478899999765 59999999999999998877888888999
Q ss_pred CeEEEEeec-CCCEEE-EccCC
Q 036314 316 DKVLCADWW-RGDSVI-SGGVD 335 (347)
Q Consensus 316 ~~v~~~~~~-~~~~l~-s~s~D 335 (347)
.+|.|..|+ +|.++| +.|.|
T Consensus 294 qpItcc~fn~~G~ifaYA~gYD 315 (347)
T KOG0647|consen 294 QPITCCSFNRNGSIFAYALGYD 315 (347)
T ss_pred CccceeEecCCCCEEEEEeecc
Confidence 999999996 788765 33445
No 65
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.97 E-value=2.3e-29 Score=227.38 Aligned_cols=316 Identities=17% Similarity=0.269 Sum_probs=235.4
Q ss_pred CCCCcCCceeeccCC-CCCEEEEEecCCeEEEEcCCC-eEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEe
Q 036314 19 EPSLHDDWVSAVDGS-NPGFILTGCYDNLGRVWKAGG-VCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWK 96 (347)
Q Consensus 19 ~~~~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~~-~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd 96 (347)
.++||+..|+.+.|. .|..|||||.|+.|.+||+-+ .-...|.||.+.|+..-|.... ..|++.|.|+.||+||
T Consensus 102 tfngHK~AVt~l~fd~~G~rlaSGskDt~IIvwDlV~E~Gl~rL~GHkd~iT~~~F~~~~----~~lvS~sKDs~iK~Wd 177 (888)
T KOG0306|consen 102 TFNGHKAAVTTLKFDKIGTRLASGSKDTDIIVWDLVGEEGLFRLRGHKDSITQALFLNGD----SFLVSVSKDSMIKFWD 177 (888)
T ss_pred eecccccceEEEEEcccCceEeecCCCccEEEEEeccceeeEEeecchHHHhHHhccCCC----eEEEEeccCceEEEEe
Confidence 367899999999998 577999999999999999744 3456799999999888877622 3688888999999998
Q ss_pred cccccccc------------------------------------------------------------------------
Q 036314 97 FDAEELVN------------------------------------------------------------------------ 104 (347)
Q Consensus 97 ~~~~~~~~------------------------------------------------------------------------ 104 (347)
+++..+..
T Consensus 178 L~tqhCf~Thvd~r~Eiw~l~~~~~~lvt~~~dse~~v~~L~~~~D~~~~~~~~s~~~~G~~~rqsk~R~i~l~~d~s~r 257 (888)
T KOG0306|consen 178 LETQHCFETHVDHRGEIWALVLDEKLLVTAGTDSELKVWELAFEDDEKETNRYISTKLRGTFIRQSKGREINLVTDFSDR 257 (888)
T ss_pred cccceeeeEEecccceEEEEEEecceEEEEecCCceEEEEeecccccccccccceeeccceeeeccCCceeEEeecCccc
Confidence 66542200
Q ss_pred -------------------------------------C------------------------------------cc-c--
Q 036314 105 -------------------------------------H------------------------------------PK-K-- 108 (347)
Q Consensus 105 -------------------------------------~------------------------------------~~-~-- 108 (347)
. .. .
T Consensus 258 ~~~c~g~d~~~e~frI~s~~E~~k~l~Kk~k~~Kkka~t~e~~~~v~~sl~~~i~r~~~ir~~~kiks~dv~~~~~~~~~ 337 (888)
T KOG0306|consen 258 FLVCQGADKVIELFRIRSKEEIAKILSKKLKRAKKKAETEENEDDVEKSLSDEIKRLETIRTSAKIKSFDVTPSGGTENT 337 (888)
T ss_pred EEEEecchhhhhheeecCHHHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHheechhheeEEEEEecCCccee
Confidence 0 00 0
Q ss_pred ---------------------ccee----eeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccc----e
Q 036314 109 ---------------------IRSF----KILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQV----S 159 (347)
Q Consensus 109 ---------------------~~~~----~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~----~ 159 (347)
+++. -.+.||...|++++++.+...++||+ .+.|++|+..+..+..... .
T Consensus 338 lv~l~nNtv~~ysl~~s~~~~p~~~~~~~i~~~GHR~dVRsl~vS~d~~~~~Sga-~~SikiWn~~t~kciRTi~~~y~l 416 (888)
T KOG0306|consen 338 LVLLANNTVEWYSLENSGKTSPEADRTSNIEIGGHRSDVRSLCVSSDSILLASGA-GESIKIWNRDTLKCIRTITCGYIL 416 (888)
T ss_pred EEEeecCceEEEEeccCCCCCccccccceeeeccchhheeEEEeecCceeeeecC-CCcEEEEEccCcceeEEeccccEE
Confidence 0000 13568999999999999988888765 4589999988765432111 0
Q ss_pred -eeecc-----------CCCccccccccccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCC-----Cce--
Q 036314 160 -IKKRK-----------GNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEM-----GKD-- 219 (347)
Q Consensus 160 -~~~~~-----------~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~-----~~~-- 219 (347)
....+ +...+.+. .....+-+.+.|++++++++. |++..++++|.|++|++||... +..
T Consensus 417 ~~~Fvpgd~~Iv~G~k~Gel~vfdl-aS~~l~Eti~AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k 495 (888)
T KOG0306|consen 417 ASKFVPGDRYIVLGTKNGELQVFDL-ASASLVETIRAHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKK 495 (888)
T ss_pred EEEecCCCceEEEeccCCceEEEEe-ehhhhhhhhhccccceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCcccce
Confidence 00111 11111110 012233456789999999986 7888999999999999999742 111
Q ss_pred ------eeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeC
Q 036314 220 ------LSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASY 293 (347)
Q Consensus 220 ------~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~ 293 (347)
.+.+.....+-|+.++|+ +.++|++-.|+++++|=+.. .+-...+.||.=+|.|+..+||+. +++|||.
T Consensus 496 ~lsl~~~rtLel~ddvL~v~~Spd-gk~LaVsLLdnTVkVyflDt---lKFflsLYGHkLPV~smDIS~DSk-livTgSA 570 (888)
T KOG0306|consen 496 VLSLKHTRTLELEDDVLCVSVSPD-GKLLAVSLLDNTVKVYFLDT---LKFFLSLYGHKLPVLSMDISPDSK-LIVTGSA 570 (888)
T ss_pred eeeeccceEEeccccEEEEEEcCC-CcEEEEEeccCeEEEEEecc---eeeeeeecccccceeEEeccCCcC-eEEeccC
Confidence 122333456889999665 56889999999999997763 233457789999999999999985 7999999
Q ss_pred CCcEEEEEcCCCccceeecCCCCeEEEEeecCCC-EEEEccCCceEEEeeccc
Q 036314 294 DGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGD-SVISGGVDSKLCVSSGVS 345 (347)
Q Consensus 294 D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~D~~v~vw~~~~ 345 (347)
|..|++|-++=|.+-+.+.+|.+.|++|.|-|.. .+.|+|.|+.|+-|+|..
T Consensus 571 DKnVKiWGLdFGDCHKS~fAHdDSvm~V~F~P~~~~FFt~gKD~kvKqWDg~k 623 (888)
T KOG0306|consen 571 DKNVKIWGLDFGDCHKSFFAHDDSVMSVQFLPKTHLFFTCGKDGKVKQWDGEK 623 (888)
T ss_pred CCceEEeccccchhhhhhhcccCceeEEEEcccceeEEEecCcceEEeechhh
Confidence 9999999999899999999999999999998755 588999999999999974
No 66
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=99.97 E-value=7.9e-30 Score=213.96 Aligned_cols=250 Identities=22% Similarity=0.430 Sum_probs=191.0
Q ss_pred CCCCcCCceeeccC--CCC--CEEEEEecCCeEEEEcCC-C----eEEEEeeccCCceEEEEEeecCCCceEEEEEccCC
Q 036314 19 EPSLHDDWVSAVDG--SNP--GFILTGCYDNLGRVWKAG-G----VCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKD 89 (347)
Q Consensus 19 ~~~~h~~~v~~~~~--~~~--~~l~sg~~d~~i~iw~~~-~----~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~D 89 (347)
...||++.|.+++. .+. ..|+++|.|.++++|... + .+++.-.||...|-+|+..+++ .++++||.|
T Consensus 139 ~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~~~~~~~~~~GHk~~V~sVsv~~sg----tr~~SgS~D 214 (423)
T KOG0313|consen 139 TIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGENKVKALKVCRGHKRSVDSVSVDSSG----TRFCSGSWD 214 (423)
T ss_pred EEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCchhhhhHHhHhcccccceeEEEecCCC----CeEEeeccc
Confidence 46799999998873 232 379999999999999753 2 1223344999999999987744 468999999
Q ss_pred CcEEEEecccccc--c--------------cCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCC
Q 036314 90 QTLRLWKFDAEEL--V--------------NHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDA 153 (347)
Q Consensus 90 g~v~~wd~~~~~~--~--------------~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~ 153 (347)
.+|++|+.+.... + .......++.++.||..+|.+|.|++ ...++|+|+|.+|+.||++....
T Consensus 215 ~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d-~~v~yS~SwDHTIk~WDletg~~ 293 (423)
T KOG0313|consen 215 TMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSD-ATVIYSVSWDHTIKVWDLETGGL 293 (423)
T ss_pred ceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEcC-CCceEeecccceEEEEEeecccc
Confidence 9999999432211 0 01112356668999999999999988 77899999999999999986532
Q ss_pred CCccceeeeccCCCccccccccccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCc--eeee-eee-Cee
Q 036314 154 AGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGK--DLSD-IFC-GKA 228 (347)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~--~~~~-~~~-~~~ 228 (347)
. .++. ......++.+ +....|++|+.|..+++||.+++. .+.. +.. .+=
T Consensus 294 ~-------------------------~~~~-~~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nw 347 (423)
T KOG0313|consen 294 K-------------------------STLT-TNKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNW 347 (423)
T ss_pred e-------------------------eeee-cCcceeEeecccccceeeecCCCCceeecCCCCCCCceeEEeeecchhh
Confidence 1 1111 2234566665 566789999999999999998753 3332 222 234
Q ss_pred eEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcC
Q 036314 229 LNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLR 303 (347)
Q Consensus 229 ~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~ 303 (347)
+..+.++|.+..+|++++.|+++++||+|.. ..+++.+.+|.+.|.++.|+..+ .++||+.|.+|+++.-.
T Consensus 348 Vssvkwsp~~~~~~~S~S~D~t~klWDvRS~--k~plydI~~h~DKvl~vdW~~~~--~IvSGGaD~~l~i~~~~ 418 (423)
T KOG0313|consen 348 VSSVKWSPTNEFQLVSGSYDNTVKLWDVRST--KAPLYDIAGHNDKVLSVDWNEGG--LIVSGGADNKLRIFKGS 418 (423)
T ss_pred hhheecCCCCceEEEEEecCCeEEEEEeccC--CCcceeeccCCceEEEEeccCCc--eEEeccCcceEEEeccc
Confidence 6788899999999999999999999999964 34689999999999999998654 69999999999998654
No 67
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=99.97 E-value=1.4e-29 Score=203.51 Aligned_cols=287 Identities=18% Similarity=0.285 Sum_probs=216.1
Q ss_pred CCCCcCCceeeccCC-CCCEEEEEecCCeEEEEcC-CCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEe
Q 036314 19 EPSLHDDWVSAVDGS-NPGFILTGCYDNLGRVWKA-GGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWK 96 (347)
Q Consensus 19 ~~~~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~-~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd 96 (347)
.+.||+.+++.+++. +|.+|.|++.|.++.+|-. .|..+-++.||++.|.++++..+ ...|+|||.|.++++||
T Consensus 5 ~l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~----s~~liTGSAD~t~kLWD 80 (327)
T KOG0643|consen 5 LLQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWD----SKHLITGSADQTAKLWD 80 (327)
T ss_pred ccccCccccceEEecCCCcEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCC----cceeeeccccceeEEEE
Confidence 456899999999987 6789999999999999974 78888999999999999998663 34799999999999999
Q ss_pred ccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEe-----eCCCcEEEEecCCCCCCCccceeeeccCCCcccc
Q 036314 97 FDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSG-----SWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEE 171 (347)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sg-----s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 171 (347)
+++++.+. ++. ...+|..+.|+.+|++++.. +.-+.|.++|+++.+...
T Consensus 81 v~tGk~la---------~~k-~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~---------------- 134 (327)
T KOG0643|consen 81 VETGKQLA---------TWK-TNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDI---------------- 134 (327)
T ss_pred cCCCcEEE---------Eee-cCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhh----------------
Confidence 99987543 332 36789999999999988765 345779999988643210
Q ss_pred ccccccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeee--eeCeeeEEEEeeCCCCcEEEEecCC
Q 036314 172 PQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDI--FCGKALNCIDIGGEGSALIAAGGSD 248 (347)
Q Consensus 172 ~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~--~~~~~~~~~~~~~~~~~~la~~~~d 248 (347)
...++...+..+.+.+..+.| |-++.|++|..||.|..||++++.....- .+...++.+.++++ ..++++++.|
T Consensus 135 --~s~ep~~kI~t~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d-~T~FiT~s~D 211 (327)
T KOG0643|consen 135 --DSEEPYLKIPTPDSKITSALWGPLGETIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRD-RTYFITGSKD 211 (327)
T ss_pred --cccCceEEecCCccceeeeeecccCCEEEEecCCCcEEEEEcccCceeeechhhhccccccccccCC-cceEEecccC
Confidence 011223445556677888888 57889999999999999999998665432 23457888888654 5688999999
Q ss_pred CcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCC-cEEEEEcCCC------------ccceeecCCC
Q 036314 249 PILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDG-KVMLWDLRTA------------WPLSVIDSHK 315 (347)
Q Consensus 249 ~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~-~i~lwd~~~~------------~~~~~~~~h~ 315 (347)
.+-++||.+.. ..++++. -..+|++.+++|-....++.|+.+. -|.-=+.+.| +.+....+|-
T Consensus 212 ttakl~D~~tl---~v~Kty~-te~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHF 287 (327)
T KOG0643|consen 212 TTAKLVDVRTL---EVLKTYT-TERPVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHF 287 (327)
T ss_pred ccceeeeccce---eeEEEee-ecccccceecccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhccccccc
Confidence 99999998743 2344543 4457899999997655444444332 1211122222 3355678999
Q ss_pred CeEEEEeecC-CCEEEEccCCceEEEee
Q 036314 316 DKVLCADWWR-GDSVISGGVDSKLCVSS 342 (347)
Q Consensus 316 ~~v~~~~~~~-~~~l~s~s~D~~v~vw~ 342 (347)
++|.+++|+| |+..+||+.||.|+|-.
T Consensus 288 GPINsvAfhPdGksYsSGGEDG~VR~h~ 315 (327)
T KOG0643|consen 288 GPINSVAFHPDGKSYSSGGEDGYVRLHH 315 (327)
T ss_pred cCcceeEECCCCcccccCCCCceEEEEE
Confidence 9999999986 77899999999999864
No 68
>KOG0294 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.97 E-value=4.3e-29 Score=205.02 Aligned_cols=256 Identities=18% Similarity=0.345 Sum_probs=195.3
Q ss_pred CcCCceeeccCCCCCEEEEEecCCeEEEEcCC-CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEecccc
Q 036314 22 LHDDWVSAVDGSNPGFILTGCYDNLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAE 100 (347)
Q Consensus 22 ~h~~~v~~~~~~~~~~l~sg~~d~~i~iw~~~-~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~ 100 (347)
.|...|++++.+ +.++||||.|.+|+|||+. ......+-.|.+.|+++.|.+.... .+|++|++||.|.+|+...
T Consensus 41 aH~~sitavAVs-~~~~aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~--shLlS~sdDG~i~iw~~~~- 116 (362)
T KOG0294|consen 41 AHAGSITALAVS-GPYVASGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSK--SHLLSGSDDGHIIIWRVGS- 116 (362)
T ss_pred ccccceeEEEec-ceeEeccCCCCcEEEEeccchhhhcceeccccceEEEEecCCcch--hheeeecCCCcEEEEEcCC-
Confidence 699999999974 6799999999999999986 3456678889999999999875432 2689999999999999754
Q ss_pred ccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccc
Q 036314 101 ELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAIS 180 (347)
Q Consensus 101 ~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (347)
+.++.++++|++.|+.++++|.|++.++.+.|+.+++||+-.+... .+.
T Consensus 117 --------W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a-----------------------~v~ 165 (362)
T KOG0294|consen 117 --------WELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVA-----------------------FVL 165 (362)
T ss_pred --------eEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcCccc-----------------------eee
Confidence 4577889999999999999999999999999999999998765311 011
Q ss_pred cccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCC
Q 036314 181 TLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKP 259 (347)
Q Consensus 181 ~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~ 259 (347)
.+. + .-..+.| +.|.+++.++.+ .|-+|.+.+......+.....+.|+.+ .++..+++|++|+.|++||...
T Consensus 166 ~L~-~--~at~v~w~~~Gd~F~v~~~~-~i~i~q~d~A~v~~~i~~~~r~l~~~~--l~~~~L~vG~d~~~i~~~D~ds- 238 (362)
T KOG0294|consen 166 NLK-N--KATLVSWSPQGDHFVVSGRN-KIDIYQLDNASVFREIENPKRILCATF--LDGSELLVGGDNEWISLKDTDS- 238 (362)
T ss_pred ccC-C--cceeeEEcCCCCEEEEEecc-EEEEEecccHhHhhhhhccccceeeee--cCCceEEEecCCceEEEeccCC-
Confidence 111 1 1122566 567777665544 599999887766555554555666666 3445788999999999999875
Q ss_pred CCCCCeEEecCCCCCeeEEE-e-CCCCCeEEEEEeCCCcEEEEEcCCC-----ccceeecCCCCeEEEEee
Q 036314 260 GTSAPVFQFSSHNSWISACK-W-HNKSWFHLISASYDGKVMLWDLRTA-----WPLSVIDSHKDKVLCADW 323 (347)
Q Consensus 260 ~~~~~~~~~~~h~~~v~~v~-~-s~~~~~~l~s~s~D~~i~lwd~~~~-----~~~~~~~~h~~~v~~~~~ 323 (347)
..+...+.+|..+|-++. + +|++ ++|+|+|.||.|+|||++.. +++..+.. ...++|+.-
T Consensus 239 --~~~~~~~~AH~~RVK~i~~~~~~~~-~~lvTaSSDG~I~vWd~~~~~k~~~~~l~e~n~-~~RltCl~~ 305 (362)
T KOG0294|consen 239 --DTPLTEFLAHENRVKDIASYTNPEH-EYLVTASSDGFIKVWDIDMETKKRPTLLAELNT-NVRLTCLRV 305 (362)
T ss_pred --CccceeeecchhheeeeEEEecCCc-eEEEEeccCceEEEEEccccccCCcceeEEeec-CCccceeee
Confidence 345778889999999988 3 3444 67999999999999999865 23444332 456667654
No 69
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=99.97 E-value=5.2e-29 Score=208.11 Aligned_cols=280 Identities=15% Similarity=0.196 Sum_probs=203.0
Q ss_pred EEEEEeccCCCCcC-CCCCcCCceeeccCC-CCCEEEEEecCCeEEEEcCC-CeEEEEeeccCCceEEEEEeecCCCceE
Q 036314 5 EIEYIKAVAPQKEE-EPSLHDDWVSAVDGS-NPGFILTGCYDNLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKYV 81 (347)
Q Consensus 5 ~~~~~~~~~~~~~~-~~~~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~-~~~~~~l~~h~~~V~~v~~~~~~~~~~~ 81 (347)
+++||=+.....+- +..+|++.|+++.|+ ++.+||||+.+|.++||+.. +.....+....+.+.-+.|+| ...
T Consensus 86 D~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~~~~~~~~e~~dieWl~WHp----~a~ 161 (399)
T KOG0296|consen 86 DLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGGEQWKLDQEVEDIEWLKWHP----RAH 161 (399)
T ss_pred ceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEcccCceEEEeecccCceEEEEecc----ccc
Confidence 35666666544433 367999999999999 67799999999999999964 555556666667778888998 446
Q ss_pred EEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccc---
Q 036314 82 TVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQV--- 158 (347)
Q Consensus 82 ~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~--- 158 (347)
.|+.|+.||.+-+|.+.++ ...+.+.||..++++=.|.|+|++++++..||+|++||..++...-...
T Consensus 162 illAG~~DGsvWmw~ip~~---------~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~~~e 232 (399)
T KOG0296|consen 162 ILLAGSTDGSVWMWQIPSQ---------ALCKVMSGHNSPCTCGEFIPDGKRILTGYDDGTIIVWNPKTGQPLHKITQAE 232 (399)
T ss_pred EEEeecCCCcEEEEECCCc---------ceeeEecCCCCCcccccccCCCceEEEEecCceEEEEecCCCceeEEecccc
Confidence 8999999999999999764 2446789999999999999999999999999999999988753211000
Q ss_pred ----eeeec--------cCCC--cc-ccccccccccccc--------cCCccceEEEEe---C-CCCeEEEEecCCcEEE
Q 036314 159 ----SIKKR--------KGNN--QV-EEPQLEGEAISTL--------VGHTQCVSSVVW---P-QQETIYSASWDHSVRT 211 (347)
Q Consensus 159 ----~~~~~--------~~~~--~~-~~~~~~~~~~~~~--------~~h~~~v~~~~~---~-~~~~l~s~s~dg~v~v 211 (347)
..... ..+. .. ......++.+... ..++..+.++.+ + .-...|+|+.||+|.|
T Consensus 233 ~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~G~vdG~i~i 312 (399)
T KOG0296|consen 233 GLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLPLAACGSVDGTIAI 312 (399)
T ss_pred cCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhhhhhcccccccchhhcccccceEEE
Confidence 00000 0000 00 0000011111111 234444444443 2 2345789999999999
Q ss_pred EECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEE
Q 036314 212 WDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291 (347)
Q Consensus 212 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~ 291 (347)
||+...+..+...+...+..+.|.+ ...+++++.+|+|+.||.|.+ ...+++.||...|.+++++|+.. +++|+
T Consensus 313 yD~a~~~~R~~c~he~~V~~l~w~~--t~~l~t~c~~g~v~~wDaRtG---~l~~~y~GH~~~Il~f~ls~~~~-~vvT~ 386 (399)
T KOG0296|consen 313 YDLAASTLRHICEHEDGVTKLKWLN--TDYLLTACANGKVRQWDARTG---QLKFTYTGHQMGILDFALSPQKR-LVVTV 386 (399)
T ss_pred EecccchhheeccCCCceEEEEEcC--cchheeeccCceEEeeecccc---ceEEEEecCchheeEEEEcCCCc-EEEEe
Confidence 9998776655555666777777755 346778889999999999853 45789999999999999999985 69999
Q ss_pred eCCCcEEEEEcC
Q 036314 292 SYDGKVMLWDLR 303 (347)
Q Consensus 292 s~D~~i~lwd~~ 303 (347)
|.|++.+||+..
T Consensus 387 s~D~~a~VF~v~ 398 (399)
T KOG0296|consen 387 SDDNTALVFEVP 398 (399)
T ss_pred cCCCeEEEEecC
Confidence 999999999863
No 70
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=99.97 E-value=3.7e-29 Score=205.09 Aligned_cols=286 Identities=17% Similarity=0.251 Sum_probs=214.5
Q ss_pred CCCcCCceeeccCC-CCCEEEEEecCCeEEEEcCC-------------C------eEEEEeeccCCceEEEEEeecCCCc
Q 036314 20 PSLHDDWVSAVDGS-NPGFILTGCYDNLGRVWKAG-------------G------VCTHILEGHCGAVSSVNIIKSDGLK 79 (347)
Q Consensus 20 ~~~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~-------------~------~~~~~l~~h~~~V~~v~~~~~~~~~ 79 (347)
...|+.+.++.+|+ +|.++||||.|..|+|.|.+ | ..+++|-.|.++|+.+.|+| .
T Consensus 108 lt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHP----r 183 (430)
T KOG0640|consen 108 LTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHP----R 183 (430)
T ss_pred EeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecc----h
Confidence 55799999999998 56799999999999999852 1 34578889999999999999 4
Q ss_pred eEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccce
Q 036314 80 YVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVS 159 (347)
Q Consensus 80 ~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~ 159 (347)
...|++|+.|++||+||+...... +..+.|. -..+|+++.|+|.|.+++.|...-++++||+++-++-..
T Consensus 184 e~ILiS~srD~tvKlFDfsK~saK------rA~K~~q-d~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~Qcfvs--- 253 (430)
T KOG0640|consen 184 ETILISGSRDNTVKLFDFSKTSAK------RAFKVFQ-DTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVS--- 253 (430)
T ss_pred hheEEeccCCCeEEEEecccHHHH------HHHHHhh-ccceeeeEeecCCCceEEEecCCCceeEEeccceeEeee---
Confidence 458999999999999998754321 1222332 356799999999999999999999999999986432100
Q ss_pred eeeccCCCccccccccccccccccCCccceEEEEeC-CCCeEEEEecCCcEEEEECCCCceeeeeee---CeeeEEEEee
Q 036314 160 IKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP-QQETIYSASWDHSVRTWDVEMGKDLSDIFC---GKALNCIDIG 235 (347)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~---~~~~~~~~~~ 235 (347)
..--.+|++.|+++.++ .+...+++|.||.|++||--+++++.++.. +..+....|.
T Consensus 254 -------------------anPd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ft 314 (430)
T KOG0640|consen 254 -------------------ANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFT 314 (430)
T ss_pred -------------------cCcccccccceeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEc
Confidence 00124588999999985 677889999999999999988888877742 3456666665
Q ss_pred CCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCC--CC---eeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCcccee
Q 036314 236 GEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHN--SW---ISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSV 310 (347)
Q Consensus 236 ~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~--~~---v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~ 310 (347)
.++.++++.+.|..+++|.+... +++..+.|.. +. -+...|+-...+.|.---..+.+.-||.|++.....
T Consensus 315 -kn~kyiLsSG~DS~vkLWEi~t~---R~l~~YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr~~l 390 (430)
T KOG0640|consen 315 -KNGKYILSSGKDSTVKLWEISTG---RMLKEYTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADRVAL 390 (430)
T ss_pred -cCCeEEeecCCcceeeeeeecCC---ceEEEEecCCcccchhhhhhhhhcCccceEEccccccCceeeccccchhhhhh
Confidence 45567888889999999998642 3344443331 11 122345555444333333456788899998766554
Q ss_pred e-cCCCCeEEEEeecC-CCEEEEccCCceEEEee
Q 036314 311 I-DSHKDKVLCADWWR-GDSVISGGVDSKLCVSS 342 (347)
Q Consensus 311 ~-~~h~~~v~~~~~~~-~~~l~s~s~D~~v~vw~ 342 (347)
+ .||.+.|+++.-+| +.-+++||.|-.+|+|=
T Consensus 391 ~slgHn~a~R~i~HSP~~p~FmTcsdD~raRFWy 424 (430)
T KOG0640|consen 391 LSLGHNGAVRWIVHSPVEPAFMTCSDDFRARFWY 424 (430)
T ss_pred cccCCCCCceEEEeCCCCCceeeecccceeeeee
Confidence 4 58999999999887 55799999999999993
No 71
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.97 E-value=3e-28 Score=211.07 Aligned_cols=244 Identities=30% Similarity=0.516 Sum_probs=199.4
Q ss_pred EEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEe
Q 036314 58 HILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSG 137 (347)
Q Consensus 58 ~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sg 137 (347)
+.+.+|.+.|.++.|++++ ..|++++.||.|++|++..++ ....+..|...+..+.|.++++.++++
T Consensus 3 ~~~~~h~~~i~~~~~~~~~----~~l~~~~~~g~i~i~~~~~~~---------~~~~~~~~~~~i~~~~~~~~~~~l~~~ 69 (289)
T cd00200 3 RTLKGHTGGVTCVAFSPDG----KLLATGSGDGTIKVWDLETGE---------LLRTLKGHTGPVRDVAASADGTYLASG 69 (289)
T ss_pred hHhcccCCCEEEEEEcCCC----CEEEEeecCcEEEEEEeeCCC---------cEEEEecCCcceeEEEECCCCCEEEEE
Confidence 4577999999999999853 368999999999999987653 344567899999999999999999999
Q ss_pred eCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeC-CCCeEEEEecCCcEEEEECCC
Q 036314 138 SWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP-QQETIYSASWDHSVRTWDVEM 216 (347)
Q Consensus 138 s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~l~s~s~dg~v~vwd~~~ 216 (347)
+.|+.|++|++.+. .....+..|...+.++.|. +++.+++++.|+.+++||+++
T Consensus 70 ~~~~~i~i~~~~~~-------------------------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 124 (289)
T cd00200 70 SSDKTIRLWDLETG-------------------------ECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVET 124 (289)
T ss_pred cCCCeEEEEEcCcc-------------------------cceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCC
Confidence 99999999998753 1233456777789999885 456677777799999999997
Q ss_pred Cceeeeee-eCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCC
Q 036314 217 GKDLSDIF-CGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDG 295 (347)
Q Consensus 217 ~~~~~~~~-~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~ 295 (347)
++....+. ....+.++.+.+. +.++++++.|+.|++||++.. .....+..|...+.++.|+|++. .|++++.|+
T Consensus 125 ~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~~~~i~i~d~~~~---~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~~~ 199 (289)
T cd00200 125 GKCLTTLRGHTDWVNSVAFSPD-GTFVASSSQDGTIKLWDLRTG---KCVATLTGHTGEVNSVAFSPDGE-KLLSSSSDG 199 (289)
T ss_pred cEEEEEeccCCCcEEEEEEcCc-CCEEEEEcCCCcEEEEEcccc---ccceeEecCccccceEEECCCcC-EEEEecCCC
Confidence 77666665 3346888999765 567777777999999999743 23566778888999999999985 478888899
Q ss_pred cEEEEEcCCCccceeecCCCCeEEEEeecC-CCEEEEccCCceEEEeecc
Q 036314 296 KVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 296 ~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~D~~v~vw~~~ 344 (347)
.|++||++.++.+..+..|.+.+.++.|++ +..+++++.|+.|++|+..
T Consensus 200 ~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~i~~~~ 249 (289)
T cd00200 200 TIKLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLR 249 (289)
T ss_pred cEEEEECCCCceecchhhcCCceEEEEEcCCCcEEEEEcCCCcEEEEEcC
Confidence 999999998888888888999999999987 5678887789999999864
No 72
>PTZ00420 coronin; Provisional
Probab=99.97 E-value=3.2e-28 Score=225.64 Aligned_cols=253 Identities=14% Similarity=0.214 Sum_probs=177.3
Q ss_pred EEecCCeEEEEcCC-CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeecc
Q 036314 40 TGCYDNLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGH 118 (347)
Q Consensus 40 sg~~d~~i~iw~~~-~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h 118 (347)
.||.++.+++|+.. ...+..+.+|.+.|.+++|+|..+ ..|+||+.|++|++||+..+.... .....+...+.+|
T Consensus 49 gGG~~gvI~L~~~~r~~~v~~L~gH~~~V~~lafsP~~~---~lLASgS~DgtIrIWDi~t~~~~~-~~i~~p~~~L~gH 124 (568)
T PTZ00420 49 GGGLIGAIRLENQMRKPPVIKLKGHTSSILDLQFNPCFS---EILASGSEDLTIRVWEIPHNDESV-KEIKDPQCILKGH 124 (568)
T ss_pred CCCceeEEEeeecCCCceEEEEcCCCCCEEEEEEcCCCC---CEEEEEeCCCeEEEEECCCCCccc-cccccceEEeecC
Confidence 36778999999864 456778999999999999998533 379999999999999997532100 0001234567899
Q ss_pred ccceEEEEEeCCCCE-EEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CC
Q 036314 119 KASVHSIAAETSGNM-VCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQ 196 (347)
Q Consensus 119 ~~~V~~v~~s~~~~~-l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~ 196 (347)
...|.+++|+|++.. +++++.|++|+|||+.++.. ...+. |...|.++.| ++
T Consensus 125 ~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~-------------------------~~~i~-~~~~V~Slswspd 178 (568)
T PTZ00420 125 KKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKR-------------------------AFQIN-MPKKLSSLKWNIK 178 (568)
T ss_pred CCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcE-------------------------EEEEe-cCCcEEEEEECCC
Confidence 999999999999875 57999999999999976421 12222 4467899998 57
Q ss_pred CCeEEEEecCCcEEEEECCCCceeeeeeeCee-e-----EEEEeeCCCCcEEEEecCC----CcEEEEeCCCCCCCCCeE
Q 036314 197 QETIYSASWDHSVRTWDVEMGKDLSDIFCGKA-L-----NCIDIGGEGSALIAAGGSD----PILRIWDPRKPGTSAPVF 266 (347)
Q Consensus 197 ~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~la~~~~d----~~i~iwd~~~~~~~~~~~ 266 (347)
+..|++++.|++|+|||+++++.+..+..+.. . ....++++ ...+++++.| +.|+|||++.... ++.
T Consensus 179 G~lLat~s~D~~IrIwD~Rsg~~i~tl~gH~g~~~s~~v~~~~fs~d-~~~IlTtG~d~~~~R~VkLWDlr~~~~--pl~ 255 (568)
T PTZ00420 179 GNLLSGTCVGKHMHIIDPRKQEIASSFHIHDGGKNTKNIWIDGLGGD-DNYILSTGFSKNNMREMKLWDLKNTTS--ALV 255 (568)
T ss_pred CCEEEEEecCCEEEEEECCCCcEEEEEecccCCceeEEEEeeeEcCC-CCEEEEEEcCCCCccEEEEEECCCCCC--ceE
Confidence 88899999999999999999988776654321 1 22233344 4456665555 3799999986433 343
Q ss_pred Eec--CCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeec--CCCCeEEEEeecCCC
Q 036314 267 QFS--SHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVID--SHKDKVLCADWWRGD 327 (347)
Q Consensus 267 ~~~--~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~--~h~~~v~~~~~~~~~ 327 (347)
.+. .+.+.+. ..|.++...++++|+.|++|++|++..+. +..+. .+..+..+++|.|.+
T Consensus 256 ~~~ld~~~~~L~-p~~D~~tg~l~lsGkGD~tIr~~e~~~~~-~~~l~~~~s~~p~~g~~f~Pkr 318 (568)
T PTZ00420 256 TMSIDNASAPLI-PHYDESTGLIYLIGKGDGNCRYYQHSLGS-IRKVNEYKSCSPFRSFGFLPKQ 318 (568)
T ss_pred EEEecCCccceE-EeeeCCCCCEEEEEECCCeEEEEEccCCc-EEeecccccCCCccceEEcccc
Confidence 332 2223222 23445544678999999999999998763 33222 245677889997643
No 73
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=3e-28 Score=217.72 Aligned_cols=270 Identities=23% Similarity=0.337 Sum_probs=214.7
Q ss_pred ccCCCCCEEEEEecCCeEEEEcC-CCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccc
Q 036314 30 VDGSNPGFILTGCYDNLGRVWKA-GGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKK 108 (347)
Q Consensus 30 ~~~~~~~~l~sg~~d~~i~iw~~-~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~ 108 (347)
++.+..+.||.| .+..+++|+. .+.......-++..|+++.|++++ .+|+.|..+|+|.|||....+
T Consensus 183 ldWss~n~laVa-lg~~vylW~~~s~~v~~l~~~~~~~vtSv~ws~~G----~~LavG~~~g~v~iwD~~~~k------- 250 (484)
T KOG0305|consen 183 LDWSSANVLAVA-LGQSVYLWSASSGSVTELCSFGEELVTSVKWSPDG----SHLAVGTSDGTVQIWDVKEQK------- 250 (484)
T ss_pred hhcccCCeEEEE-ecceEEEEecCCCceEEeEecCCCceEEEEECCCC----CEEEEeecCCeEEEEehhhcc-------
Confidence 334444555555 5668999996 455444445558999999999854 479999999999999987543
Q ss_pred cceeeeeec-cccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCcc
Q 036314 109 IRSFKILRG-HKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQ 187 (347)
Q Consensus 109 ~~~~~~~~~-h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 187 (347)
....+.+ |...|.+++|. +..+.+|+.|+.|..+|++..+. ...++.+|..
T Consensus 251 --~~~~~~~~h~~rvg~laW~--~~~lssGsr~~~I~~~dvR~~~~------------------------~~~~~~~H~q 302 (484)
T KOG0305|consen 251 --KTRTLRGSHASRVGSLAWN--SSVLSSGSRDGKILNHDVRISQH------------------------VVSTLQGHRQ 302 (484)
T ss_pred --ccccccCCcCceeEEEecc--CceEEEecCCCcEEEEEEecchh------------------------hhhhhhcccc
Confidence 3345566 99999999998 67899999999999999875421 1224788999
Q ss_pred ceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeee-eCeeeEEEEeeCCCCcEEEEec--CCCcEEEEeCCCCCCCC
Q 036314 188 CVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIF-CGKALNCIDIGGEGSALIAAGG--SDPILRIWDPRKPGTSA 263 (347)
Q Consensus 188 ~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~la~~~--~d~~i~iwd~~~~~~~~ 263 (347)
.|+.+.| +++.+++||+.|+.+.|||.....+...+. +...+..++|+|-...+||+|+ .|+.|++||.....
T Consensus 303 eVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~--- 379 (484)
T KOG0305|consen 303 EVCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGA--- 379 (484)
T ss_pred eeeeeEECCCCCeeccCCCccceEeccCCCccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCc---
Confidence 9999999 578899999999999999997666665554 4467999999998888999974 69999999987432
Q ss_pred CeEEecCCCCCeeEEEeCCCCCeEEEEEe-CCCcEEEEEcCCCccceeecCCCCeEEEEeecC-CCEEEEccCCceEEEe
Q 036314 264 PVFQFSSHNSWISACKWHNKSWFHLISAS-YDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKLCVS 341 (347)
Q Consensus 264 ~~~~~~~h~~~v~~v~~s~~~~~~l~s~s-~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~D~~v~vw 341 (347)
.+..+ .-.+.|.++.|++....++.+-+ .+..|.||+.-+...+..+.+|...|+.++++| |..+++|+.|.|+++|
T Consensus 380 ~i~~v-dtgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~~~~~~l~gH~~RVl~la~SPdg~~i~t~a~DETlrfw 458 (484)
T KOG0305|consen 380 RIDSV-DTGSQVCSLIWSKKYKELLSTHGYSENQITLWKYPSMKLVAELLGHTSRVLYLALSPDGETIVTGAADETLRFW 458 (484)
T ss_pred Eeccc-ccCCceeeEEEcCCCCEEEEecCCCCCcEEEEeccccceeeeecCCcceeEEEEECCCCCEEEEecccCcEEec
Confidence 23332 35567999999999876555544 467899999999888899999999999999986 6789999999999999
Q ss_pred ec
Q 036314 342 SG 343 (347)
Q Consensus 342 ~~ 343 (347)
.-
T Consensus 459 ~~ 460 (484)
T KOG0305|consen 459 NL 460 (484)
T ss_pred cc
Confidence 63
No 74
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.97 E-value=2.3e-29 Score=213.21 Aligned_cols=259 Identities=22% Similarity=0.313 Sum_probs=199.6
Q ss_pred eEEEEEEeccCCCCcCCCCCcCCceeeccCC-CCCEEEEEecCCeEEEEcCC-CeEEEEee-ccCCceEEEEEeecCCCc
Q 036314 3 VLEIEYIKAVAPQKEEEPSLHDDWVSAVDGS-NPGFILTGCYDNLGRVWKAG-GVCTHILE-GHCGAVSSVNIIKSDGLK 79 (347)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~-~~~~~~l~-~h~~~V~~v~~~~~~~~~ 79 (347)
+|++.|.+.++ -..+..+|..+|..+.+| ++++|+++|.|..+++||.. |.+.+.+. +|...+.+.+|.|++
T Consensus 250 iw~v~~d~~~k--l~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg--- 324 (519)
T KOG0293|consen 250 IWIVVYDVHFK--LKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDG--- 324 (519)
T ss_pred EEEEecCccee--eeeeeecccCceEEEEECCCCCeEEecCchHheeeccCCcchhhhhcccCcCCCcceeEEccCC---
Confidence 56777765531 123567999999999998 56799999999999999974 66655443 456889999999944
Q ss_pred eEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccce
Q 036314 80 YVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVS 159 (347)
Q Consensus 80 ~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~ 159 (347)
..+++|+.|+++.+||++.+.. ..++-.. ...|.+++..+||+.+++...|..|++++.++....
T Consensus 325 -~~~V~Gs~dr~i~~wdlDgn~~----~~W~gvr-----~~~v~dlait~Dgk~vl~v~~d~~i~l~~~e~~~dr----- 389 (519)
T KOG0293|consen 325 -FRFVTGSPDRTIIMWDLDGNIL----GNWEGVR-----DPKVHDLAITYDGKYVLLVTVDKKIRLYNREARVDR----- 389 (519)
T ss_pred -ceeEecCCCCcEEEecCCcchh----hcccccc-----cceeEEEEEcCCCcEEEEEecccceeeechhhhhhh-----
Confidence 4689999999999999987642 1222211 245899999999999999999999999987653210
Q ss_pred eeeccCCCccccccccccccccccCCccceEEEEeC-CCCeEEEEecCCcEEEEECCCCceeeeeeeCe---eeEEEEee
Q 036314 160 IKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP-QQETIYSASWDHSVRTWDVEMGKDLSDIFCGK---ALNCIDIG 235 (347)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~---~~~~~~~~ 235 (347)
.+.....+|.++..+ ++++++.--.+..+++||++....+.....++ .+..-.|+
T Consensus 390 ---------------------~lise~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFg 448 (519)
T KOG0293|consen 390 ---------------------GLISEEQPITSFSISKDGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFG 448 (519)
T ss_pred ---------------------ccccccCceeEEEEcCCCcEEEEEcccCeeEEeecchhhHHHHhhcccccceEEEeccC
Confidence 112233567777765 56677777788999999999777666655432 33344566
Q ss_pred CCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCC
Q 036314 236 GEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTA 305 (347)
Q Consensus 236 ~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~ 305 (347)
..+..++|+|++|++|+||+... ..++..++||...|++|+|+|.+++++||||.||+||||.+...
T Consensus 449 g~~~~fiaSGSED~kvyIWhr~s---gkll~~LsGHs~~vNcVswNP~~p~m~ASasDDgtIRIWg~~~~ 515 (519)
T KOG0293|consen 449 GGNDKFIASGSEDSKVYIWHRIS---GKLLAVLSGHSKTVNCVSWNPADPEMFASASDDGTIRIWGPSDN 515 (519)
T ss_pred CCCcceEEecCCCceEEEEEccC---CceeEeecCCcceeeEEecCCCCHHHhhccCCCCeEEEecCCcc
Confidence 66678999999999999999764 34688999999999999999999999999999999999988653
No 75
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.97 E-value=4.8e-29 Score=228.49 Aligned_cols=253 Identities=19% Similarity=0.297 Sum_probs=194.1
Q ss_pred EEee-ccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccc--------------------------c------
Q 036314 58 HILE-GHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELV--------------------------N------ 104 (347)
Q Consensus 58 ~~l~-~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~--------------------------~------ 104 (347)
+.+. .|.+.|.++.|++ ++++||+|+.|+.||||.+...+.. .
T Consensus 260 Qe~~~ah~gaIw~mKFS~----DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~ 335 (712)
T KOG0283|consen 260 QEISNAHKGAIWAMKFSH----DGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSR 335 (712)
T ss_pred eccccccCCcEEEEEeCC----CCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccc
Confidence 3455 8999999999999 4468999999999999997651000 0
Q ss_pred ---------Cc----------cccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccC
Q 036314 105 ---------HP----------KKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKG 165 (347)
Q Consensus 105 ---------~~----------~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~ 165 (347)
.+ -..+++..+.||.+.|.++.|+.+ ++|+|+|.|.|||||++...
T Consensus 336 ~s~~~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn-~fLLSSSMDKTVRLWh~~~~-------------- 400 (712)
T KOG0283|consen 336 TSSSRKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKN-NFLLSSSMDKTVRLWHPGRK-------------- 400 (712)
T ss_pred ccccccccCCccccCCCccccccccchhhhhccchhheecccccC-CeeEeccccccEEeecCCCc--------------
Confidence 00 012555678999999999999975 58999999999999998753
Q ss_pred CCccccccccccccccccCCccceEEEEe-C-CCCeEEEEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEE
Q 036314 166 NNQVEEPQLEGEAISTLVGHTQCVSSVVW-P-QQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIA 243 (347)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~-~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la 243 (347)
++++++. |.+.|+|++| | ++++++||+.|+.||||++...+.+.-......++++++.|+ +...+
T Consensus 401 -----------~CL~~F~-HndfVTcVaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~Dl~~lITAvcy~Pd-Gk~av 467 (712)
T KOG0283|consen 401 -----------ECLKVFS-HNDFVTCVAFNPVDDRYFISGSLDGKVRLWSISDKKVVDWNDLRDLITAVCYSPD-GKGAV 467 (712)
T ss_pred -----------ceeeEEe-cCCeeEEEEecccCCCcEeecccccceEEeecCcCeeEeehhhhhhheeEEeccC-CceEE
Confidence 3455543 9999999999 4 678999999999999999987654432234567889999876 56778
Q ss_pred EecCCCcEEEEeCCCCCCCCCeEEec-------CCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCC
Q 036314 244 AGGSDPILRIWDPRKPGTSAPVFQFS-------SHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKD 316 (347)
Q Consensus 244 ~~~~d~~i~iwd~~~~~~~~~~~~~~-------~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~ 316 (347)
.|+.+|.+++|+.+... ......+. .|. .|+.+.|.|.....++..+.|..|||+|.++...+..|.|+.+
T Consensus 468 IGt~~G~C~fY~t~~lk-~~~~~~I~~~~~Kk~~~~-rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~KfKG~~n 545 (712)
T KOG0283|consen 468 IGTFNGYCRFYDTEGLK-LVSDFHIRLHNKKKKQGK-RITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHKFKGFRN 545 (712)
T ss_pred EEEeccEEEEEEccCCe-EEEeeeEeeccCccccCc-eeeeeEecCCCCCeEEEecCCCceEEEeccchhhhhhhccccc
Confidence 89999999999987421 11111221 233 7999999987766688889999999999988878888877653
Q ss_pred eE--EEEeec-CCCEEEEccCCceEEEeecc
Q 036314 317 KV--LCADWW-RGDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 317 ~v--~~~~~~-~~~~l~s~s~D~~v~vw~~~ 344 (347)
.- ....|+ +|++|++++.|.-|+||...
T Consensus 546 ~~SQ~~Asfs~Dgk~IVs~seDs~VYiW~~~ 576 (712)
T KOG0283|consen 546 TSSQISASFSSDGKHIVSASEDSWVYIWKND 576 (712)
T ss_pred CCcceeeeEccCCCEEEEeecCceEEEEeCC
Confidence 22 345774 79999999999999999964
No 76
>KOG1036 consensus Mitotic spindle checkpoint protein BUB3, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=7.7e-28 Score=197.22 Aligned_cols=276 Identities=16% Similarity=0.213 Sum_probs=209.0
Q ss_pred CCCcCCCCCcCCceeeccCCC-CCEEEEEecCCeEEEEcCCCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcE
Q 036314 14 PQKEEEPSLHDDWVSAVDGSN-PGFILTGCYDNLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTL 92 (347)
Q Consensus 14 ~~~~~~~~~h~~~v~~~~~~~-~~~l~sg~~d~~i~iw~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v 92 (347)
++..+......+.|+.+.|++ .+.|+.+||||++|+|+.....++..-.|..++.+.+|.+. ..+++|+.||+|
T Consensus 3 ~~~~~l~npP~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l~~~~~~~~plL~c~F~d~-----~~~~~G~~dg~v 77 (323)
T KOG1036|consen 3 PNEFELENPPEDGISSVKFSPSSSDLLVSSWDGSLRLYDVPANSLKLKFKHGAPLLDCAFADE-----STIVTGGLDGQV 77 (323)
T ss_pred ccccccCCCChhceeeEEEcCcCCcEEEEeccCcEEEEeccchhhhhheecCCceeeeeccCC-----ceEEEeccCceE
Confidence 556666777789999999984 45777788999999999876555555569999999999863 258999999999
Q ss_pred EEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccc
Q 036314 93 RLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEP 172 (347)
Q Consensus 93 ~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (347)
|++|+++++. ..+..|..+|+|+.+.+-...+++||+|++|++||......
T Consensus 78 r~~Dln~~~~----------~~igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~------------------- 128 (323)
T KOG1036|consen 78 RRYDLNTGNE----------DQIGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVV------------------- 128 (323)
T ss_pred EEEEecCCcc----------eeeccCCCceEEEEeeccCCeEEEcccCccEEEEecccccc-------------------
Confidence 9999987642 34667999999999998888999999999999999764211
Q ss_pred cccccccccccCCccceEEEEeCCCCeEEEEecCCcEEEEECCCCceeeeee---eCeeeEEEEeeCCCCcEEEEecCCC
Q 036314 173 QLEGEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIF---CGKALNCIDIGGEGSALIAAGGSDP 249 (347)
Q Consensus 173 ~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~---~~~~~~~~~~~~~~~~~la~~~~d~ 249 (347)
..++. ..+.|.++.. .++.|+.|..|..+.+||++......+.. ....+.|+++.|+..- ++.++-||
T Consensus 129 ------~~~~d-~~kkVy~~~v-~g~~LvVg~~~r~v~iyDLRn~~~~~q~reS~lkyqtR~v~~~pn~eG-y~~sSieG 199 (323)
T KOG1036|consen 129 ------VGTFD-QGKKVYCMDV-SGNRLVVGTSDRKVLIYDLRNLDEPFQRRESSLKYQTRCVALVPNGEG-YVVSSIEG 199 (323)
T ss_pred ------ccccc-cCceEEEEec-cCCEEEEeecCceEEEEEcccccchhhhccccceeEEEEEEEecCCCc-eEEEeecc
Confidence 11111 2235666653 56778888999999999998765544222 2446789998885544 46677899
Q ss_pred cEEEEeCCCC-CCCCCeEEecCCCC---------CeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEE
Q 036314 250 ILRIWDPRKP-GTSAPVFQFSSHNS---------WISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVL 319 (347)
Q Consensus 250 ~i~iwd~~~~-~~~~~~~~~~~h~~---------~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~ 319 (347)
.|.+=..... ......+.|..|.. +|++++|+|--. .||||+.||.|.+||+...+.+..+..-...|.
T Consensus 200 RVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fhp~~~-tfaTgGsDG~V~~Wd~~~rKrl~q~~~~~~SI~ 278 (323)
T KOG1036|consen 200 RVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFHPIHG-TFATGGSDGIVNIWDLFNRKRLKQLAKYETSIS 278 (323)
T ss_pred eEEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeEeccccc-eEEecCCCceEEEccCcchhhhhhccCCCCceE
Confidence 8876443321 22234567777754 589999999854 599999999999999988877887766667899
Q ss_pred EEeec-CCCEEEEcc
Q 036314 320 CADWW-RGDSVISGG 333 (347)
Q Consensus 320 ~~~~~-~~~~l~s~s 333 (347)
+++|+ +|..||.++
T Consensus 279 slsfs~dG~~LAia~ 293 (323)
T KOG1036|consen 279 SLSFSMDGSLLAIAS 293 (323)
T ss_pred EEEeccCCCeEEEEe
Confidence 99997 688888776
No 77
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=99.97 E-value=4.3e-30 Score=204.69 Aligned_cols=244 Identities=18% Similarity=0.239 Sum_probs=195.3
Q ss_pred CCcCCceeeccCCC-CCEEEEEecCCeEEEEcC-CCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEecc
Q 036314 21 SLHDDWVSAVDGSN-PGFILTGCYDNLGRVWKA-GGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFD 98 (347)
Q Consensus 21 ~~h~~~v~~~~~~~-~~~l~sg~~d~~i~iw~~-~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~ 98 (347)
-+|++.|+...... ....||++.|-+.++||. .|..++.|. |.--|.+++|+.+. ..|+||+.+.-+|+||++
T Consensus 56 eghkgavw~~~l~~na~~aasaaadftakvw~a~tgdelhsf~-hkhivk~~af~~ds----~~lltgg~ekllrvfdln 130 (334)
T KOG0278|consen 56 EGHKGAVWSATLNKNATRAASAAADFTAKVWDAVTGDELHSFE-HKHIVKAVAFSQDS----NYLLTGGQEKLLRVFDLN 130 (334)
T ss_pred eccCcceeeeecCchhhhhhhhcccchhhhhhhhhhhhhhhhh-hhheeeeEEecccc----hhhhccchHHHhhhhhcc
Confidence 37999999888764 457889999999999994 677776665 77778999999844 469999999999999987
Q ss_pred ccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccc
Q 036314 99 AEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEA 178 (347)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (347)
..+. +...+.+|.+.|+.+.|....+.|+|++.|++||+||.+++. .
T Consensus 131 ~p~A--------pp~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt-------------------------~ 177 (334)
T KOG0278|consen 131 RPKA--------PPKEISGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGT-------------------------E 177 (334)
T ss_pred CCCC--------CchhhcCCCCcceeEEEeccCceEEeeccCCceEEEEeccCc-------------------------E
Confidence 6432 234578999999999999988999999999999999998752 2
Q ss_pred cccccCCccceEEEEeCCCCeEEEEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCC
Q 036314 179 ISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRK 258 (347)
Q Consensus 179 ~~~~~~h~~~v~~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~ 258 (347)
.+++. ....|.++..+.+..+++..+.+.|+.||..+-..++....+..+....++|+. ..+++|++|..++.||...
T Consensus 178 v~sL~-~~s~VtSlEvs~dG~ilTia~gssV~Fwdaksf~~lKs~k~P~nV~SASL~P~k-~~fVaGged~~~~kfDy~T 255 (334)
T KOG0278|consen 178 VQSLE-FNSPVTSLEVSQDGRILTIAYGSSVKFWDAKSFGLLKSYKMPCNVESASLHPKK-EFFVAGGEDFKVYKFDYNT 255 (334)
T ss_pred EEEEe-cCCCCcceeeccCCCEEEEecCceeEEeccccccceeeccCccccccccccCCC-ceEEecCcceEEEEEeccC
Confidence 22222 234577777766667778888999999999988877776656667777787665 6888999999999999875
Q ss_pred CCCCCCeEE-ecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccc
Q 036314 259 PGTSAPVFQ-FSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPL 308 (347)
Q Consensus 259 ~~~~~~~~~-~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~ 308 (347)
... +-. .++|.+.|.|+.|+|+|. .-|+||.||+|+||....++..
T Consensus 256 geE---i~~~nkgh~gpVhcVrFSPdGE-~yAsGSEDGTirlWQt~~~~~~ 302 (334)
T KOG0278|consen 256 GEE---IGSYNKGHFGPVHCVRFSPDGE-LYASGSEDGTIRLWQTTPGKTY 302 (334)
T ss_pred Cce---eeecccCCCCceEEEEECCCCc-eeeccCCCceEEEEEecCCCch
Confidence 432 333 489999999999999995 6899999999999998776543
No 78
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=99.97 E-value=7.4e-29 Score=215.53 Aligned_cols=307 Identities=18% Similarity=0.265 Sum_probs=214.5
Q ss_pred EeccCCCCcCCCCCcCCceeeccCC-CCCEEEEEecCCeEEEEcCCCeE--E---EE-eeccCCceEEEEEeecCCCceE
Q 036314 9 IKAVAPQKEEEPSLHDDWVSAVDGS-NPGFILTGCYDNLGRVWKAGGVC--T---HI-LEGHCGAVSSVNIIKSDGLKYV 81 (347)
Q Consensus 9 ~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~~~~--~---~~-l~~h~~~V~~v~~~~~~~~~~~ 81 (347)
++.++..-|....+|+..|+++++. +|-.|+|||.|.+|++||..|.- . +. ...-+-.|++++|++.++
T Consensus 152 ~~~IP~shEi~l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~---- 227 (641)
T KOG0772|consen 152 IKLIPGSHEIQLKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGD---- 227 (641)
T ss_pred hhcCCccceEeccCCceEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCC----
Confidence 4444333333467899999999987 46699999999999999986532 1 12 223345688999998443
Q ss_pred EEEEccCCCcEEEEeccccccccCc---cccceeeeeeccccceEEEEEeCCC-CEEEEeeCCCcEEEEecCCCCCCCcc
Q 036314 82 TVATASKDQTLRLWKFDAEELVNHP---KKIRSFKILRGHKASVHSIAAETSG-NMVCSGSWDCTISLWRTNDSDAAGNQ 157 (347)
Q Consensus 82 ~l~s~s~Dg~v~~wd~~~~~~~~~~---~~~~~~~~~~~h~~~V~~v~~s~~~-~~l~sgs~Dg~I~iwd~~~~~~~~~~ 157 (347)
+|+..+.....+++|.+.-+...-. .-++.+....||...++|..|+|+. ..++|++.||++|||++.+.......
T Consensus 228 ~iLvvsg~aqakl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qV 307 (641)
T KOG0772|consen 228 QILVVSGSAQAKLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQV 307 (641)
T ss_pred eEEEEecCcceeEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeE
Confidence 4556666678999998765433211 1223334567999999999999987 58899999999999999865321111
Q ss_pred ceeeeccCCCccccccccccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCc--eeeeee----eCeeeE
Q 036314 158 VSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGK--DLSDIF----CGKALN 230 (347)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~--~~~~~~----~~~~~~ 230 (347)
+ +.. ...+-.-.+...+| +++..||+|..||.|++||...-. ....+. .+..++
T Consensus 308 i---k~k----------------~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~It 368 (641)
T KOG0772|consen 308 I---KTK----------------PAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDIT 368 (641)
T ss_pred E---eec----------------cCCCcccCceeeecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCcee
Confidence 1 100 00122234566778 578889999999999999974321 111121 133689
Q ss_pred EEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCC--CeeEEEeCCCCCeEEEEEeC------CCcEEEEEc
Q 036314 231 CIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNS--WISACKWHNKSWFHLISASY------DGKVMLWDL 302 (347)
Q Consensus 231 ~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~--~v~~v~~s~~~~~~l~s~s~------D~~i~lwd~ 302 (347)
|+.|+++ ++.|++=+.|+++++||+++.+.+ +..+.+-.. .-..|.|||+.. +|++|.. -|++.+||.
T Consensus 369 si~FS~d-g~~LlSRg~D~tLKvWDLrq~kkp--L~~~tgL~t~~~~tdc~FSPd~k-li~TGtS~~~~~~~g~L~f~d~ 444 (641)
T KOG0772|consen 369 SISFSYD-GNYLLSRGFDDTLKVWDLRQFKKP--LNVRTGLPTPFPGTDCCFSPDDK-LILTGTSAPNGMTAGTLFFFDR 444 (641)
T ss_pred EEEeccc-cchhhhccCCCceeeeeccccccc--hhhhcCCCccCCCCccccCCCce-EEEecccccCCCCCceEEEEec
Confidence 9999765 567788899999999999976543 433333322 346789999984 6777753 467999999
Q ss_pred CCCccceeecCCCCeEEEEeecC-CCEEEEccCCceEEEee
Q 036314 303 RTAWPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKLCVSS 342 (347)
Q Consensus 303 ~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~D~~v~vw~ 342 (347)
.+-+.++.+.--...|..+.|+| -++|..|+.||+++|+=
T Consensus 445 ~t~d~v~ki~i~~aSvv~~~WhpkLNQi~~gsgdG~~~vyY 485 (641)
T KOG0772|consen 445 MTLDTVYKIDISTASVVRCLWHPKLNQIFAGSGDGTAHVYY 485 (641)
T ss_pred cceeeEEEecCCCceEEEEeecchhhheeeecCCCceEEEE
Confidence 99888888766678888999987 45677778899998873
No 79
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=99.97 E-value=2.2e-28 Score=209.76 Aligned_cols=256 Identities=20% Similarity=0.310 Sum_probs=204.9
Q ss_pred CCcCCceeeccCC--CCCEEEEEecCCeEEEEcCC---CeE--------EEEeeccCCceEEEEEeecCCCceEEEEEcc
Q 036314 21 SLHDDWVSAVDGS--NPGFILTGCYDNLGRVWKAG---GVC--------THILEGHCGAVSSVNIIKSDGLKYVTVATAS 87 (347)
Q Consensus 21 ~~h~~~v~~~~~~--~~~~l~sg~~d~~i~iw~~~---~~~--------~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s 87 (347)
..|.+.|.-++.- ++.++||++..+.+.|||.+ +.. -..|.||++.=.++.|.+... -.|++++
T Consensus 121 i~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~---g~Lls~~ 197 (422)
T KOG0264|consen 121 INHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQE---GTLLSGS 197 (422)
T ss_pred ccCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccc---eeEeecc
Confidence 3688899988854 56799999999999999853 111 126889998778888877432 3689999
Q ss_pred CCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCC-CEEEEeeCCCcEEEEecCCCCCCCccceeeeccCC
Q 036314 88 KDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSG-NMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGN 166 (347)
Q Consensus 88 ~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~-~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~ 166 (347)
.|++|.+||++..... .+...+...+.+|++.|..++|++.. .+|++++.|+.+.|||++...
T Consensus 198 ~d~~i~lwdi~~~~~~--~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~-------------- 261 (422)
T KOG0264|consen 198 DDHTICLWDINAESKE--DKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNT-------------- 261 (422)
T ss_pred CCCcEEEEeccccccC--CccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCC--------------
Confidence 9999999999764321 22345566789999999999998865 688899999999999998521
Q ss_pred CccccccccccccccccCCccceEEEEeC--CCCeEEEEecCCcEEEEECCCC-ceeeeeee-CeeeEEEEeeCCCCcEE
Q 036314 167 NQVEEPQLEGEAISTLVGHTQCVSSVVWP--QQETIYSASWDHSVRTWDVEMG-KDLSDIFC-GKALNCIDIGGEGSALI 242 (347)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~l~s~s~dg~v~vwd~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~l 242 (347)
.++.....+|+..|+++.|+ ++..||++|.|++|++||+|.- +++..+.. ...+.++.|+|....++
T Consensus 262 ---------~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvL 332 (422)
T KOG0264|consen 262 ---------SKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVL 332 (422)
T ss_pred ---------CCCcccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCCCCCcee
Confidence 12233557799999999994 4556899999999999999874 44455543 34789999999999999
Q ss_pred EEecCCCcEEEEeCCCCC-----------CCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCC
Q 036314 243 AAGGSDPILRIWDPRKPG-----------TSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRT 304 (347)
Q Consensus 243 a~~~~d~~i~iwd~~~~~-----------~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~ 304 (347)
|+++.|+.+.+||+.+-+ ++.+++.-.||+..|..+.|+|..++.++|.+.|+.+.||++..
T Consensus 333 ASSg~D~rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s~ 405 (422)
T KOG0264|consen 333 ASSGTDRRLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMAE 405 (422)
T ss_pred EecccCCcEEEEeccccccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeeccc
Confidence 999999999999986422 23456888999999999999999999999999999999999864
No 80
>KOG1332 consensus Vesicle coat complex COPII, subunit SEC13 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.97 E-value=8e-29 Score=196.81 Aligned_cols=251 Identities=20% Similarity=0.342 Sum_probs=189.6
Q ss_pred EeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeC--CCCEEEE
Q 036314 59 ILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAET--SGNMVCS 136 (347)
Q Consensus 59 ~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~--~~~~l~s 136 (347)
+-..|.+.|..+..... +..|||+|.|++|||+.+..+.. ...+.+|+||.+||..++|.. .|.+|||
T Consensus 6 idt~H~D~IHda~lDyy----gkrlATcsSD~tVkIf~v~~n~~------s~ll~~L~Gh~GPVwqv~wahPk~G~iLAS 75 (299)
T KOG1332|consen 6 IDTQHEDMIHDAQLDYY----GKRLATCSSDGTVKIFEVRNNGQ------SKLLAELTGHSGPVWKVAWAHPKFGTILAS 75 (299)
T ss_pred hhhhhhhhhhHhhhhhh----cceeeeecCCccEEEEEEcCCCC------ceeeeEecCCCCCeeEEeecccccCcEeeE
Confidence 44578887776554332 24799999999999999876532 356778999999999999965 7999999
Q ss_pred eeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeCC---CCeEEEEecCCcEEEEE
Q 036314 137 GSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQ---QETIYSASWDHSVRTWD 213 (347)
Q Consensus 137 gs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~---~~~l~s~s~dg~v~vwd 213 (347)
+++||.|.||.-+.+.- +.......|...|++++|.+ +-.|++++.||.|.|.+
T Consensus 76 csYDgkVIiWke~~g~w-----------------------~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~ 132 (299)
T KOG1332|consen 76 CSYDGKVIIWKEENGRW-----------------------TKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLT 132 (299)
T ss_pred eecCceEEEEecCCCch-----------------------hhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEE
Confidence 99999999998665421 23445677999999999943 44699999999999998
Q ss_pred CCCC-c-eeeeee-eC-eeeEEEEeeCC---C----------CcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCee
Q 036314 214 VEMG-K-DLSDIF-CG-KALNCIDIGGE---G----------SALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWIS 276 (347)
Q Consensus 214 ~~~~-~-~~~~~~-~~-~~~~~~~~~~~---~----------~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~ 276 (347)
.+.. . ....+. .+ -.++.+.+.|. + ...|++|+.|+.|+||+.... ......+|.+|.++|+
T Consensus 133 ~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~-~w~~e~~l~~H~dwVR 211 (299)
T KOG1332|consen 133 YDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSD-SWKLERTLEGHKDWVR 211 (299)
T ss_pred EcCCCCccchhhhhccccccceeeecCcCCCccccccCcccccceeeccCCccceeeeecCCc-chhhhhhhhhcchhhh
Confidence 7654 2 122222 12 24566666553 1 135899999999999997753 3445567999999999
Q ss_pred EEEeCCCC---CeEEEEEeCCCcEEEEEcCCC-c--cceeecCCCCeEEEEeec-CCCEEEEccCCceEEEeec
Q 036314 277 ACKWHNKS---WFHLISASYDGKVMLWDLRTA-W--PLSVIDSHKDKVLCADWW-RGDSVISGGVDSKLCVSSG 343 (347)
Q Consensus 277 ~v~~s~~~---~~~l~s~s~D~~i~lwd~~~~-~--~~~~~~~h~~~v~~~~~~-~~~~l~s~s~D~~v~vw~~ 343 (347)
+++|.|.. ...|||+|.||++.||-.+.. + ....+......++.+.|| .|+.|+.++.|+.|.+|.-
T Consensus 212 DVAwaP~~gl~~s~iAS~SqDg~viIwt~~~e~e~wk~tll~~f~~~~w~vSWS~sGn~LaVs~GdNkvtlwke 285 (299)
T KOG1332|consen 212 DVAWAPSVGLPKSTIASCSQDGTVIIWTKDEEYEPWKKTLLEEFPDVVWRVSWSLSGNILAVSGGDNKVTLWKE 285 (299)
T ss_pred hhhhccccCCCceeeEEecCCCcEEEEEecCccCcccccccccCCcceEEEEEeccccEEEEecCCcEEEEEEe
Confidence 99999975 246999999999999977632 1 123345567889999998 5899999999999999963
No 81
>KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.96 E-value=1.2e-28 Score=219.65 Aligned_cols=307 Identities=21% Similarity=0.295 Sum_probs=227.6
Q ss_pred ceEEEEEEeccCCCCcCCCCCcCCcee---eccCC--CCCEEEEEecCCeEEEEcCC---C----eEEEEeeccCCceEE
Q 036314 2 KVLEIEYIKAVAPQKEEEPSLHDDWVS---AVDGS--NPGFILTGCYDNLGRVWKAG---G----VCTHILEGHCGAVSS 69 (347)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~h~~~v~---~~~~~--~~~~l~sg~~d~~i~iw~~~---~----~~~~~l~~h~~~V~~ 69 (347)
|...+.|+.+-...+ -|...|. ++..+ +++||.|||.||.||+|+.. + .+...++.|.+-|+.
T Consensus 4 kk~kvsyVi~D~~e~-----qn~~~v~~~~~Lq~da~~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVND 78 (735)
T KOG0308|consen 4 KKKKVSYVIRDENEK-----QNRNGVNITKALQLDAPNGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVND 78 (735)
T ss_pred ceeEEEEEccchhhh-----hccccccchhhccccCCCCceEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhh
Confidence 556788885443222 3334444 44443 56689999999999999863 2 256789999999999
Q ss_pred EEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEE-eCCCCEEEEeeCCCcEEEEec
Q 036314 70 VNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAA-ETSGNMVCSGSWDCTISLWRT 148 (347)
Q Consensus 70 v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~-s~~~~~l~sgs~Dg~I~iwd~ 148 (347)
+.....+ ..|+|+|.|-+|++|+...+. --+..+++.|++-|.|+++ .++..++||||.|+.|.+||+
T Consensus 79 iiL~~~~----~tlIS~SsDtTVK~W~~~~~~-------~~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDi 147 (735)
T KOG0308|consen 79 IILCGNG----KTLISASSDTTVKVWNAHKDN-------TFCMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDI 147 (735)
T ss_pred HHhhcCC----CceEEecCCceEEEeecccCc-------chhHhhhhcccchheeeeecccCceeEEecCCCccEEEEEc
Confidence 8876633 369999999999999987542 1256678899999999999 888899999999999999999
Q ss_pred CCCCCCCccceeeeccCCCcccccccccccccccc-CCccceEEEEeC-CCCeEEEEecCCcEEEEECCCCceeeeeeeC
Q 036314 149 NDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLV-GHTQCVSSVVWP-QQETIYSASWDHSVRTWDVEMGKDLSDIFCG 226 (347)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~-~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~ 226 (347)
+.+...- .. .+.......+. |+...|++++.. .+..+++|+..+-+++||.++++.+..+..+
T Consensus 148 n~~~~~l-~~--------------s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek~lr~wDprt~~kimkLrGH 212 (735)
T KOG0308|consen 148 NTGTATL-VA--------------SFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCKKIMKLRGH 212 (735)
T ss_pred cCcchhh-hh--------------hccccccccCCCCCccceeeeecCCcceEEEecCcccceEEeccccccceeeeecc
Confidence 8653200 00 00001122233 788899999974 4557899999999999999999999888754
Q ss_pred e-eeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCC
Q 036314 227 K-ALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTA 305 (347)
Q Consensus 227 ~-~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~ 305 (347)
. .+.++-+.. ++..+++++.||+|++||+.. .+.++++..|.+.|+++..+|+= ..+.+|+.||.|..=|+++.
T Consensus 213 TdNVr~ll~~d-DGt~~ls~sSDgtIrlWdLgq---QrCl~T~~vH~e~VWaL~~~~sf-~~vYsG~rd~~i~~Tdl~n~ 287 (735)
T KOG0308|consen 213 TDNVRVLLVND-DGTRLLSASSDGTIRLWDLGQ---QRCLATYIVHKEGVWALQSSPSF-THVYSGGRDGNIYRTDLRNP 287 (735)
T ss_pred ccceEEEEEcC-CCCeEeecCCCceEEeeeccc---cceeeeEEeccCceEEEeeCCCc-ceEEecCCCCcEEecccCCc
Confidence 3 567777754 556778999999999999985 34578899999999999998765 46999999999999999985
Q ss_pred ccceeecCCCCeEEEEeec-CCCEEEEccCCceEEEeecc
Q 036314 306 WPLSVIDSHKDKVLCADWW-RGDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 306 ~~~~~~~~h~~~v~~~~~~-~~~~l~s~s~D~~v~vw~~~ 344 (347)
.....+.-...+|..+..+ ..+.+-.++.|+.|+-|.+.
T Consensus 288 ~~~tlick~daPv~~l~~~~~~~~~WvtTtds~I~rW~~~ 327 (735)
T KOG0308|consen 288 AKSTLICKEDAPVLKLHLHEHDNSVWVTTTDSSIKRWKLE 327 (735)
T ss_pred hhheEeecCCCchhhhhhccccCCceeeeccccceecCCc
Confidence 4333343334566666654 23334556778888888765
No 82
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=99.96 E-value=1.4e-26 Score=190.66 Aligned_cols=274 Identities=17% Similarity=0.221 Sum_probs=205.4
Q ss_pred cCCceeeccCC-CCCEEEEEecCCeEEEEcC-CCeEEEEeeccCCceEEEEEeecCCCceEEEEEccC--CCcEEEEecc
Q 036314 23 HDDWVSAVDGS-NPGFILTGCYDNLGRVWKA-GGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASK--DQTLRLWKFD 98 (347)
Q Consensus 23 h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~-~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~--Dg~v~~wd~~ 98 (347)
..+.|.+++|+ +|.+|++++.|.+++|||. .|.+++++..+.-.+..+.|..... .++.+|. |.+||.-++.
T Consensus 13 ~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~----~~i~sStk~d~tIryLsl~ 88 (311)
T KOG1446|consen 13 TNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSN----TVIHSSTKEDDTIRYLSLH 88 (311)
T ss_pred CCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCc----eEEEccCCCCCceEEEEee
Confidence 56889999998 5678999999999999996 5888888888877788888865432 3444554 8899999998
Q ss_pred ccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccc
Q 036314 99 AEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEA 178 (347)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (347)
+++ .++.|.||...|++++.+|-++.++|+|.|++||+||++...+.+..
T Consensus 89 dNk---------ylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l--------------------- 138 (311)
T KOG1446|consen 89 DNK---------YLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLL--------------------- 138 (311)
T ss_pred cCc---------eEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEE---------------------
Confidence 765 56779999999999999999999999999999999999865433211
Q ss_pred cccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCC-cee-eee--e--eCeeeEEEEeeCCCCcEEEEecCCCcE
Q 036314 179 ISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMG-KDL-SDI--F--CGKALNCIDIGGEGSALIAAGGSDPIL 251 (347)
Q Consensus 179 ~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~-~~~-~~~--~--~~~~~~~~~~~~~~~~~la~~~~d~~i 251 (347)
..... ...+| |.|-.+|.+.....|++||++.- +-. ..+ . .....+.+.|++++. .++.++..+.+
T Consensus 139 ----~~~~~--pi~AfDp~GLifA~~~~~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK-~iLlsT~~s~~ 211 (311)
T KOG1446|consen 139 ----NLSGR--PIAAFDPEGLIFALANGSELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGK-SILLSTNASFI 211 (311)
T ss_pred ----ecCCC--cceeECCCCcEEEEecCCCeEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCC-EEEEEeCCCcE
Confidence 00111 22355 45666777766669999999863 222 222 1 123567889977655 55566778999
Q ss_pred EEEeCCCCCCCCCeEEecCCCCCe---eEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecC-CCCeEEEEeecCCC
Q 036314 252 RIWDPRKPGTSAPVFQFSSHNSWI---SACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDS-HKDKVLCADWWRGD 327 (347)
Q Consensus 252 ~iwd~~~~~~~~~~~~~~~h~~~v---~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~-h~~~v~~~~~~~~~ 327 (347)
++.|.-.+. ...+++++...- .+..|.||+. ++++|+.||+|.+|+++++..+..+++ +.+.+.|+.|+|..
T Consensus 212 ~~lDAf~G~---~~~tfs~~~~~~~~~~~a~ftPds~-Fvl~gs~dg~i~vw~~~tg~~v~~~~~~~~~~~~~~~fnP~~ 287 (311)
T KOG1446|consen 212 YLLDAFDGT---VKSTFSGYPNAGNLPLSATFTPDSK-FVLSGSDDGTIHVWNLETGKKVAVLRGPNGGPVSCVRFNPRY 287 (311)
T ss_pred EEEEccCCc---EeeeEeeccCCCCcceeEEECCCCc-EEEEecCCCcEEEEEcCCCcEeeEecCCCCCCccccccCCce
Confidence 999976543 355666665432 5678999995 699999999999999999999999988 78999999998875
Q ss_pred EEEEccCCceEEEee
Q 036314 328 SVISGGVDSKLCVSS 342 (347)
Q Consensus 328 ~l~s~s~D~~v~vw~ 342 (347)
.+ -++.+..+.+|-
T Consensus 288 ~m-f~sa~s~l~fw~ 301 (311)
T KOG1446|consen 288 AM-FVSASSNLVFWL 301 (311)
T ss_pred ee-eeecCceEEEEe
Confidence 32 234567787873
No 83
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=99.96 E-value=2.1e-29 Score=217.33 Aligned_cols=207 Identities=26% Similarity=0.425 Sum_probs=178.1
Q ss_pred eeeeeeccccceEEEEEeC-CCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccce
Q 036314 111 SFKILRGHKASVHSIAAET-SGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCV 189 (347)
Q Consensus 111 ~~~~~~~h~~~V~~v~~s~-~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 189 (347)
.+.++.||...|+++.|.| .+.+|+|++.|+.|+||++.+. +.+++++.+|..+|
T Consensus 206 ~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~------------------------~~~lrtf~gH~k~V 261 (503)
T KOG0282|consen 206 LSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDD------------------------RRCLRTFKGHRKPV 261 (503)
T ss_pred heeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecC------------------------cceehhhhcchhhh
Confidence 4457899999999999999 8899999999999999998652 46789999999999
Q ss_pred EEEEeC-CCCeEEEEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEe
Q 036314 190 SSVVWP-QQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQF 268 (347)
Q Consensus 190 ~~~~~~-~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~ 268 (347)
.++.|+ ++..++|+|.|+.+++||+++|+++..+..+..+.|+.+.|++.+.+++|+.|+.|+.||+|.++ .++.+
T Consensus 262 rd~~~s~~g~~fLS~sfD~~lKlwDtETG~~~~~f~~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~k---vvqeY 338 (503)
T KOG0282|consen 262 RDASFNNCGTSFLSASFDRFLKLWDTETGQVLSRFHLDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGK---VVQEY 338 (503)
T ss_pred hhhhccccCCeeeeeecceeeeeeccccceEEEEEecCCCceeeecCCCCCcEEEEecCCCcEEEEeccchH---HHHHH
Confidence 999996 67789999999999999999999999888888999999999988999999999999999999643 36677
Q ss_pred cCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccc----------------------------------------
Q 036314 269 SSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPL---------------------------------------- 308 (347)
Q Consensus 269 ~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~---------------------------------------- 308 (347)
..|-+.|..+.|-+++. .+++++.|++++||+.+.+.++
T Consensus 339 d~hLg~i~~i~F~~~g~-rFissSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~ 417 (503)
T KOG0282|consen 339 DRHLGAILDITFVDEGR-RFISSSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPP 417 (503)
T ss_pred HhhhhheeeeEEccCCc-eEeeeccCccEEEEEcCCCccchhhcchhhccCcceecCCCCCeehhhccCceEEEEecccc
Confidence 88999999999999986 5999999999999998764321
Q ss_pred ------eeecCCCCe--EEEEeecC-CCEEEEccCCceEEEeeccc
Q 036314 309 ------SVIDSHKDK--VLCADWWR-GDSVISGGVDSKLCVSSGVS 345 (347)
Q Consensus 309 ------~~~~~h~~~--v~~~~~~~-~~~l~s~s~D~~v~vw~~~~ 345 (347)
+.++||..+ -..+.||| |.+|++|+.||.+.+|+..+
T Consensus 418 ~r~nkkK~feGh~vaGys~~v~fSpDG~~l~SGdsdG~v~~wdwkt 463 (503)
T KOG0282|consen 418 FRLNKKKRFEGHSVAGYSCQVDFSPDGRTLCSGDSDGKVNFWDWKT 463 (503)
T ss_pred cccCHhhhhcceeccCceeeEEEcCCCCeEEeecCCccEEEeechh
Confidence 124566533 24578885 77899999999999999764
No 84
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.96 E-value=1.1e-27 Score=224.76 Aligned_cols=287 Identities=18% Similarity=0.292 Sum_probs=222.1
Q ss_pred cCCceeeccCCC-CCEEEEEe--cCCeEEEEcCC-------------CeEEEEeeccCCceEEEEEeecCCCceEEEEEc
Q 036314 23 HDDWVSAVDGSN-PGFILTGC--YDNLGRVWKAG-------------GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATA 86 (347)
Q Consensus 23 h~~~v~~~~~~~-~~~l~sg~--~d~~i~iw~~~-------------~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~ 86 (347)
++..|-+++.++ +..+|||| .|+.++||+.. .+.+-++..|.+.|+|+.|++++ .+||+|
T Consensus 12 ~~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG----~~lAsG 87 (942)
T KOG0973|consen 12 NEKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDG----SYLASG 87 (942)
T ss_pred CCeeEEEEEecCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCC----CeEeec
Confidence 346678888874 56899999 99999999742 12234577899999999999944 589999
Q ss_pred cCCCcEEEEeccc----ccc-----ccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCcc
Q 036314 87 SKDQTLRLWKFDA----EEL-----VNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQ 157 (347)
Q Consensus 87 s~Dg~v~~wd~~~----~~~-----~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~ 157 (347)
|+|..|.+|+... ..+ ....+.++...++++|+..|..++|+|++.+++|+|.|++|.|||..+.
T Consensus 88 SDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF------ 161 (942)
T KOG0973|consen 88 SDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTF------ 161 (942)
T ss_pred cCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEccccc------
Confidence 9999999999873 111 2234567888999999999999999999999999999999999997653
Q ss_pred ceeeeccCCCccccccccccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeeee-------Ceee
Q 036314 158 VSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFC-------GKAL 229 (347)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~-------~~~~ 229 (347)
+.+..+.+|...|..+.| |-|++++|-+.|++|++|++.+-...+.+.. ...+
T Consensus 162 -------------------~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f 222 (942)
T KOG0973|consen 162 -------------------ELLKVLRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFF 222 (942)
T ss_pred -------------------eeeeeeecccccccceEECCccCeeeeecCCceEEEEEcccceeeEeeccchhhCCCccee
Confidence 456788999999999999 6799999999999999999766433333321 1235
Q ss_pred EEEEeeCCCCcEEEEe----cCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCC------C---------C-eEEE
Q 036314 230 NCIDIGGEGSALIAAG----GSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNK------S---------W-FHLI 289 (347)
Q Consensus 230 ~~~~~~~~~~~~la~~----~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~------~---------~-~~l~ 289 (347)
..+.|+|+ +.+|++. +.-.++.|.+.. ....-..|-||.+.+.+++|+|. . . ..+|
T Consensus 223 ~RlSWSPD-G~~las~nA~n~~~~~~~IieR~---tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~A 298 (942)
T KOG0973|consen 223 LRLSWSPD-GHHLASPNAVNGGKSTIAIIERG---TWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAA 298 (942)
T ss_pred eecccCCC-cCeecchhhccCCcceeEEEecC---CceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEE
Confidence 66788665 4566654 234577777642 33445678899999999999983 1 1 1689
Q ss_pred EEeCCCcEEEEEcCCCccceee-cCCCCeEEEEeecC-CCEEEEccCCceEEEee
Q 036314 290 SASYDGKVMLWDLRTAWPLSVI-DSHKDKVLCADWWR-GDSVISGGVDSKLCVSS 342 (347)
Q Consensus 290 s~s~D~~i~lwd~~~~~~~~~~-~~h~~~v~~~~~~~-~~~l~s~s~D~~v~vw~ 342 (347)
+||.|++|-||.....+|+... +-....|..+.|+| |..|..+|.||+|.+-.
T Consensus 299 vgSqDrSlSVW~T~~~RPl~vi~~lf~~SI~DmsWspdG~~LfacS~DGtV~~i~ 353 (942)
T KOG0973|consen 299 VGSQDRSLSVWNTALPRPLFVIHNLFNKSIVDMSWSPDGFSLFACSLDGTVALIH 353 (942)
T ss_pred EecCCccEEEEecCCCCchhhhhhhhcCceeeeeEcCCCCeEEEEecCCeEEEEE
Confidence 9999999999998777776543 22345799999985 66799999999998754
No 85
>KOG0300 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.96 E-value=9.2e-28 Score=197.57 Aligned_cols=284 Identities=22% Similarity=0.351 Sum_probs=205.8
Q ss_pred EEEEEecCCeEEEEcCCCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeee
Q 036314 37 FILTGCYDNLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILR 116 (347)
Q Consensus 37 ~l~sg~~d~~i~iw~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~ 116 (347)
.|++.=.|+++.. ..++.|.||.+.|..++..... ..+.++|.|.+.+||.++++. ++.++.
T Consensus 126 rivssFk~~t~~~-----~lvre~~GHkDGiW~Vaa~~tq----pi~gtASADhTA~iWs~Esg~---------CL~~Y~ 187 (481)
T KOG0300|consen 126 RIVSSFKDGTVKF-----RLVRELEGHKDGIWHVAADSTQ----PICGTASADHTARIWSLESGA---------CLATYT 187 (481)
T ss_pred hheeeecCCceeE-----eehhhhcccccceeeehhhcCC----cceeecccccceeEEeecccc---------ceeeec
Confidence 3444444444322 3456789999999998765422 268999999999999999875 556788
Q ss_pred ccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCc---------------ccccccccccccc
Q 036314 117 GHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQ---------------VEEPQLEGEAIST 181 (347)
Q Consensus 117 ~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~ 181 (347)
||.+.|+++.|++.+.+++++|.|++..||...-.-...............+ -.+..--..++..
T Consensus 188 GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ 267 (481)
T KOG0300|consen 188 GHTGSVNSIKFHNSGLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMR 267 (481)
T ss_pred ccccceeeEEeccccceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeee
Confidence 9999999999999999999999999999997321100000000000000000 0000111244567
Q ss_pred ccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeeeeC-eeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCC
Q 036314 182 LVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCG-KALNCIDIGGEGSALIAAGGSDPILRIWDPRKP 259 (347)
Q Consensus 182 ~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~ 259 (347)
+.+|...|.+..| ..+++++++|+|++-.+||++++..+..+..+ ...+...-+| ...++++.+.|.+.++||.+.
T Consensus 268 ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELtHcstHp-tQrLVvTsSrDtTFRLWDFRe- 345 (481)
T KOG0300|consen 268 LTGHRAVVSACDWLAGGQQMVTASWDRTANLWDVETGEVVNILTGHDSELTHCSTHP-TQRLVVTSSRDTTFRLWDFRE- 345 (481)
T ss_pred eeccccceEehhhhcCcceeeeeeccccceeeeeccCceeccccCcchhccccccCC-cceEEEEeccCceeEeccchh-
Confidence 8899999988888 46788999999999999999999988776543 3444444444 456889999999999999883
Q ss_pred CCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCC-ccceeecCCCCeEEEEeecCCC-EEEEccCCce
Q 036314 260 GTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTA-WPLSVIDSHKDKVLCADWWRGD-SVISGGVDSK 337 (347)
Q Consensus 260 ~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~-~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~D~~ 337 (347)
....+..|.||.+.|.++.|+-+. .+++||.|.+|++||+++. .++.++.. ..++..++.+.|. .+|---.+.-
T Consensus 346 -aI~sV~VFQGHtdtVTS~vF~~dd--~vVSgSDDrTvKvWdLrNMRsplATIRt-dS~~NRvavs~g~~iIAiPhDNRq 421 (481)
T KOG0300|consen 346 -AIQSVAVFQGHTDTVTSVVFNTDD--RVVSGSDDRTVKVWDLRNMRSPLATIRT-DSPANRVAVSKGHPIIAIPHDNRQ 421 (481)
T ss_pred -hcceeeeecccccceeEEEEecCC--ceeecCCCceEEEeeeccccCcceeeec-CCccceeEeecCCceEEeccCCce
Confidence 344577899999999999998875 4999999999999999875 45667653 4577888888766 4555556677
Q ss_pred EEEeecc
Q 036314 338 LCVSSGV 344 (347)
Q Consensus 338 v~vw~~~ 344 (347)
|++++.+
T Consensus 422 vRlfDln 428 (481)
T KOG0300|consen 422 VRLFDLN 428 (481)
T ss_pred EEEEecC
Confidence 8888765
No 86
>KOG0294 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.96 E-value=4.7e-27 Score=193.10 Aligned_cols=259 Identities=19% Similarity=0.276 Sum_probs=200.2
Q ss_pred EEEEEecCCeEEEEcCC--C-------e----EEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccc
Q 036314 37 FILTGCYDNLGRVWKAG--G-------V----CTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELV 103 (347)
Q Consensus 37 ~l~sg~~d~~i~iw~~~--~-------~----~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~ 103 (347)
.|+.|++...|.-+++. . + ....+..|.+++++++++. .++||||.|-+|+|||+....
T Consensus 3 ~iIvGtYE~~i~Gf~l~~~~~~~~~s~~~~l~~lF~~~aH~~sitavAVs~------~~~aSGssDetI~IYDm~k~~-- 74 (362)
T KOG0294|consen 3 EIIVGTYEHVILGFKLDPEPKGCTDSVKPTLKPLFAFSAHAGSITALAVSG------PYVASGSSDETIHIYDMRKRK-- 74 (362)
T ss_pred eEEEeeeeeEEEEEEeccCccccccccceeeeccccccccccceeEEEecc------eeEeccCCCCcEEEEeccchh--
Confidence 36778887777666531 1 1 1345778999999999854 479999999999999997643
Q ss_pred cCccccceeeeeeccccceEEEEEeCCCC--EEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccccccccc
Q 036314 104 NHPKKIRSFKILRGHKASVHSIAAETSGN--MVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAIST 181 (347)
Q Consensus 104 ~~~~~~~~~~~~~~h~~~V~~v~~s~~~~--~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (347)
.+..+..|.+.|+++.|.+.-. .|+||+.||.|.+|+..+. .++.+
T Consensus 75 -------qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W-------------------------~~~~s 122 (362)
T KOG0294|consen 75 -------QLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSW-------------------------ELLKS 122 (362)
T ss_pred -------hhcceeccccceEEEEecCCcchhheeeecCCCcEEEEEcCCe-------------------------EEeee
Confidence 3445678999999999988764 8999999999999998653 34678
Q ss_pred ccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCC
Q 036314 182 LVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPG 260 (347)
Q Consensus 182 ~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~ 260 (347)
+++|.+.|+.++. |.++.-++.+.|+.+++||+-.|+....+...+....+.|.+.+. .++..+ .+.|-+|.+....
T Consensus 123 lK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L~~~at~v~w~~~Gd-~F~v~~-~~~i~i~q~d~A~ 200 (362)
T KOG0294|consen 123 LKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLNLKNKATLVSWSPQGD-HFVVSG-RNKIDIYQLDNAS 200 (362)
T ss_pred ecccccccceeEecCCCceEEEEcCCceeeeehhhcCccceeeccCCcceeeEEcCCCC-EEEEEe-ccEEEEEecccHh
Confidence 8999999999986 566777899999999999998887666555555566688876555 444444 4678999876421
Q ss_pred CCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeec--C-CCEEEEccCCce
Q 036314 261 TSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWW--R-GDSVISGGVDSK 337 (347)
Q Consensus 261 ~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~--~-~~~l~s~s~D~~ 337 (347)
++........+.++.|...+ .|++|..|+.|++||-+...++..+.+|++.|-.+.+- | +.+|+|+|.||.
T Consensus 201 ----v~~~i~~~~r~l~~~~l~~~--~L~vG~d~~~i~~~D~ds~~~~~~~~AH~~RVK~i~~~~~~~~~~lvTaSSDG~ 274 (362)
T KOG0294|consen 201 ----VFREIENPKRILCATFLDGS--ELLVGGDNEWISLKDTDSDTPLTEFLAHENRVKDIASYTNPEHEYLVTASSDGF 274 (362)
T ss_pred ----HhhhhhccccceeeeecCCc--eEEEecCCceEEEeccCCCccceeeecchhheeeeEEEecCCceEEEEeccCce
Confidence 11111222556777776443 59999999999999999988899999999999998863 2 568999999999
Q ss_pred EEEeec
Q 036314 338 LCVSSG 343 (347)
Q Consensus 338 v~vw~~ 343 (347)
|+||+.
T Consensus 275 I~vWd~ 280 (362)
T KOG0294|consen 275 IKVWDI 280 (362)
T ss_pred EEEEEc
Confidence 999985
No 87
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.96 E-value=2.7e-27 Score=193.40 Aligned_cols=241 Identities=17% Similarity=0.305 Sum_probs=185.5
Q ss_pred eccCCceEEEEEeecCCCceEEEEEccCCCcEEEEecccc-ccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeC
Q 036314 61 EGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAE-ELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSW 139 (347)
Q Consensus 61 ~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~-~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~ 139 (347)
...++.|.+|+|+|... .+++.+|.||+||+|+++.. .+. + +....|.++|.+++|+.||..+++|+.
T Consensus 24 ~pP~DsIS~l~FSP~~~---~~~~A~SWD~tVR~wevq~~g~~~-------~-ka~~~~~~PvL~v~WsddgskVf~g~~ 92 (347)
T KOG0647|consen 24 NPPEDSISALAFSPQAD---NLLAAGSWDGTVRIWEVQNSGQLV-------P-KAQQSHDGPVLDVCWSDDGSKVFSGGC 92 (347)
T ss_pred CCcccchheeEeccccC---ceEEecccCCceEEEEEecCCccc-------c-hhhhccCCCeEEEEEccCCceEEeecc
Confidence 34668899999999432 36779999999999999863 221 1 234569999999999999999999999
Q ss_pred CCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CC--CCeEEEEecCCcEEEEECCC
Q 036314 140 DCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQ--QETIYSASWDHSVRTWDVEM 216 (347)
Q Consensus 140 Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~--~~~l~s~s~dg~v~vwd~~~ 216 (347)
|+.+++||+.++. ......|..+|..+.| +. -+.|++||+|++||.||++.
T Consensus 93 Dk~~k~wDL~S~Q--------------------------~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~ 146 (347)
T KOG0647|consen 93 DKQAKLWDLASGQ--------------------------VSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRS 146 (347)
T ss_pred CCceEEEEccCCC--------------------------eeeeeecccceeEEEEecCCCcceeEecccccceeecccCC
Confidence 9999999998652 3355669999999998 32 34689999999999999999
Q ss_pred CceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCC-CeeEEEeCCCCCeEEEEEeCCC
Q 036314 217 GKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNS-WISACKWHNKSWFHLISASYDG 295 (347)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~-~v~~v~~s~~~~~~l~s~s~D~ 295 (347)
..++.++...+.+++++.-.+ +++.+..+..|.+|+++.+... .......-+ .+++++..++... .|-|+-+|
T Consensus 147 ~~pv~t~~LPeRvYa~Dv~~p---m~vVata~r~i~vynL~n~~te--~k~~~SpLk~Q~R~va~f~d~~~-~alGsiEG 220 (347)
T KOG0647|consen 147 SNPVATLQLPERVYAADVLYP---MAVVATAERHIAVYNLENPPTE--FKRIESPLKWQTRCVACFQDKDG-FALGSIEG 220 (347)
T ss_pred CCeeeeeeccceeeehhccCc---eeEEEecCCcEEEEEcCCCcch--hhhhcCcccceeeEEEEEecCCc-eEeeeecc
Confidence 999998888888888887433 5667778999999999764221 111111122 3678887777665 58899999
Q ss_pred cEEEEEcCCCcc--ceeecCCCC---------eEEEEeecC-CCEEEEccCCceEEEeecc
Q 036314 296 KVMLWDLRTAWP--LSVIDSHKD---------KVLCADWWR-GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 296 ~i~lwd~~~~~~--~~~~~~h~~---------~v~~~~~~~-~~~l~s~s~D~~v~vw~~~ 344 (347)
++.|..++.+.+ -.+|..|.. +|.+++|+| -..|+|+|.||+..+|+-.
T Consensus 221 rv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~FhP~hgtlvTaGsDGtf~FWDkd 281 (347)
T KOG0647|consen 221 RVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAVNSIAFHPVHGTLVTAGSDGTFSFWDKD 281 (347)
T ss_pred eEEEEecCCCCccCceeEEEeccCCCCCCceEEecceEeecccceEEEecCCceEEEecch
Confidence 999999988633 445666652 456788987 4579999999999999853
No 88
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=99.96 E-value=6.7e-29 Score=210.45 Aligned_cols=247 Identities=22% Similarity=0.326 Sum_probs=199.9
Q ss_pred CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCE
Q 036314 54 GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNM 133 (347)
Q Consensus 54 ~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~ 133 (347)
..+...+..|.+.|..+.|.+..+ .|++|+.|..|++|++..++. ....+|.|..++|+++.|.++++.
T Consensus 165 S~~~~~ld~h~gev~~v~~l~~sd----tlatgg~Dr~Ik~W~v~~~k~-------~~~~tLaGs~g~it~~d~d~~~~~ 233 (459)
T KOG0288|consen 165 SRALFVLDAHEGEVHDVEFLRNSD----TLATGGSDRIIKLWNVLGEKS-------ELISTLAGSLGNITSIDFDSDNKH 233 (459)
T ss_pred hhhhhhhhccccccceeEEccCcc----hhhhcchhhhhhhhhcccchh-------hhhhhhhccCCCcceeeecCCCce
Confidence 344566889999999999987433 699999999999999876542 345678888999999999999999
Q ss_pred EEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeCCCC-eEEEEecCCcEEEE
Q 036314 134 VCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQE-TIYSASWDHSVRTW 212 (347)
Q Consensus 134 l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~dg~v~vw 212 (347)
+++++.|+.+++|++.+. ....++.||++.|.++.|..+. .+++++.|.++++|
T Consensus 234 ~iAas~d~~~r~Wnvd~~-------------------------r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~W 288 (459)
T KOG0288|consen 234 VIAASNDKNLRLWNVDSL-------------------------RLRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLW 288 (459)
T ss_pred EEeecCCCceeeeeccch-------------------------hhhhhhcccccceeeehhhccccceeeccccchhhhh
Confidence 999999999999998753 2355789999999999885444 39999999999999
Q ss_pred ECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEe
Q 036314 213 DVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISAS 292 (347)
Q Consensus 213 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s 292 (347)
|+....+.++.........+... ...+++|..|++|++||++.+. +....+.+. .|.++..++++. .|.+++
T Consensus 289 Dl~k~~C~kt~l~~S~cnDI~~~---~~~~~SgH~DkkvRfwD~Rs~~---~~~sv~~gg-~vtSl~ls~~g~-~lLsss 360 (459)
T KOG0288|consen 289 DLQKAYCSKTVLPGSQCNDIVCS---ISDVISGHFDKKVRFWDIRSAD---KTRSVPLGG-RVTSLDLSMDGL-ELLSSS 360 (459)
T ss_pred hhhhhheeccccccccccceEec---ceeeeecccccceEEEeccCCc---eeeEeecCc-ceeeEeeccCCe-EEeeec
Confidence 99998888877766555555553 3467899999999999998642 345555555 899999999985 588889
Q ss_pred CCCcEEEEEcCCCccceeecCCC----CeEEEEeecC-CCEEEEccCCceEEEeecc
Q 036314 293 YDGKVMLWDLRTAWPLSVIDSHK----DKVLCADWWR-GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 293 ~D~~i~lwd~~~~~~~~~~~~h~----~~v~~~~~~~-~~~l~s~s~D~~v~vw~~~ 344 (347)
-|.++++.|+++.+..+.+.+-. .....+.||| +.|+|+||.||.|+||+..
T Consensus 361 RDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~ 417 (459)
T KOG0288|consen 361 RDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSVF 417 (459)
T ss_pred CCCceeeeecccccEEEEeeccccccccccceeEECCCCceeeeccCCCcEEEEEcc
Confidence 99999999999987766664321 2367899987 5589999999999999864
No 89
>KOG2445 consensus Nuclear pore complex component (sc Seh1) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=8.8e-27 Score=190.93 Aligned_cols=259 Identities=22% Similarity=0.311 Sum_probs=190.7
Q ss_pred eeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeC--CCCEEEEe
Q 036314 60 LEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAET--SGNMVCSG 137 (347)
Q Consensus 60 l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~--~~~~l~sg 137 (347)
-.+|.+-|.++.|.+.+ +.+||||.|++|+|||.+.. ...+.+....+.|.+.|..|.|.+ .|+.+|++
T Consensus 9 ~s~h~DlihdVs~D~~G----RRmAtCSsDq~vkI~d~~~~-----s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~c 79 (361)
T KOG2445|consen 9 DSGHKDLIHDVSFDFYG----RRMATCSSDQTVKIWDSTSD-----SGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATC 79 (361)
T ss_pred ccCCcceeeeeeecccC----ceeeeccCCCcEEEEeccCC-----CCceEEeeeEEecCCcEEEEEecCccccceEEEE
Confidence 34788999999998755 36999999999999997543 245667778899999999999843 58999999
Q ss_pred eCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeC---CCCeEEEEecCCcEEEEEC
Q 036314 138 SWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP---QQETIYSASWDHSVRTWDV 214 (347)
Q Consensus 138 s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~---~~~~l~s~s~dg~v~vwd~ 214 (347)
|.|++++||.-.......... .-....++......|.++.|. -|-.+++++.||++|||+.
T Consensus 80 S~Drtv~iWEE~~~~~~~~~~----------------~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA 143 (361)
T KOG2445|consen 80 SYDRTVSIWEEQEKSEEAHGR----------------RWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEA 143 (361)
T ss_pred ecCCceeeeeecccccccccc----------------eeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEec
Confidence 999999999642111111000 001234556666788999884 3557999999999999998
Q ss_pred CCCceeeeee--------------eCeeeEEEEeeCC--CCcEEEEecCC-----CcEEEEeCCCCC-CCCCeEEecCCC
Q 036314 215 EMGKDLSDIF--------------CGKALNCIDIGGE--GSALIAAGGSD-----PILRIWDPRKPG-TSAPVFQFSSHN 272 (347)
Q Consensus 215 ~~~~~~~~~~--------------~~~~~~~~~~~~~--~~~~la~~~~d-----~~i~iwd~~~~~-~~~~~~~~~~h~ 272 (347)
.....+..+. +..+..|+.+.+. ...+||.|+.+ +.+.||.-.... +...+..+.+|+
T Consensus 144 ~dp~nLs~W~Lq~Ei~~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~ 223 (361)
T KOG2445|consen 144 PDPMNLSQWTLQHEIQNVIDPPGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHT 223 (361)
T ss_pred CCccccccchhhhhhhhccCCcccccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCC
Confidence 7654443322 1224567777632 23467877654 488999755433 334566788999
Q ss_pred CCeeEEEeCCCCC---eEEEEEeCCCcEEEEEcCCC--------------------ccceeecCCCCeEEEEeec-CCCE
Q 036314 273 SWISACKWHNKSW---FHLISASYDGKVMLWDLRTA--------------------WPLSVIDSHKDKVLCADWW-RGDS 328 (347)
Q Consensus 273 ~~v~~v~~s~~~~---~~l~s~s~D~~i~lwd~~~~--------------------~~~~~~~~h~~~v~~~~~~-~~~~ 328 (347)
+.|.+++|.|.-+ ++||+++.|| |+||.++.. +.+..+.+|.++|+.+.|. .|..
T Consensus 224 dpI~di~wAPn~Gr~y~~lAvA~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGti 302 (361)
T KOG2445|consen 224 DPIRDISWAPNIGRSYHLLAVATKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTGTI 302 (361)
T ss_pred CcceeeeeccccCCceeeEEEeecCc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeeeeE
Confidence 9999999999743 5799999999 999998731 1133467899999999997 6889
Q ss_pred EEEccCCceEEEeecc
Q 036314 329 VISGGVDSKLCVSSGV 344 (347)
Q Consensus 329 l~s~s~D~~v~vw~~~ 344 (347)
|+|.|.||+||+|.-+
T Consensus 303 LsStGdDG~VRLWkan 318 (361)
T KOG2445|consen 303 LSSTGDDGCVRLWKAN 318 (361)
T ss_pred EeecCCCceeeehhhh
Confidence 9999999999999743
No 90
>PTZ00421 coronin; Provisional
Probab=99.96 E-value=2.8e-26 Score=211.56 Aligned_cols=239 Identities=23% Similarity=0.335 Sum_probs=172.3
Q ss_pred EEEccCCCcEEEEeccccccccC-cc--c-cceeeeeeccccceEEEEEeC-CCCEEEEeeCCCcEEEEecCCCCCCCcc
Q 036314 83 VATASKDQTLRLWKFDAEELVNH-PK--K-IRSFKILRGHKASVHSIAAET-SGNMVCSGSWDCTISLWRTNDSDAAGNQ 157 (347)
Q Consensus 83 l~s~s~Dg~v~~wd~~~~~~~~~-~~--~-~~~~~~~~~h~~~V~~v~~s~-~~~~l~sgs~Dg~I~iwd~~~~~~~~~~ 157 (347)
+++++.+.....|+...+..+.. .+ . ......+.+|.++|.+++|+| ++++|++|+.|++|++||+.+......
T Consensus 35 ~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~- 113 (493)
T PTZ00421 35 TIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQN- 113 (493)
T ss_pred cEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccc-
Confidence 56677777777777554432110 00 0 011234789999999999999 789999999999999999875321100
Q ss_pred ceeeeccCCCccccccccccccccccCCccceEEEEeC-C-CCeEEEEecCCcEEEEECCCCceeeeeee-CeeeEEEEe
Q 036314 158 VSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP-Q-QETIYSASWDHSVRTWDVEMGKDLSDIFC-GKALNCIDI 234 (347)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~-~~~l~s~s~dg~v~vwd~~~~~~~~~~~~-~~~~~~~~~ 234 (347)
....+..+.+|...|.++.|+ . +..|++++.|++|+|||+++++.+..+.. ...+.+++|
T Consensus 114 -----------------~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h~~~V~sla~ 176 (493)
T PTZ00421 114 -----------------ISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCHSDQITSLEW 176 (493)
T ss_pred -----------------cCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcCCCCceEEEEE
Confidence 012355778999999999995 3 35899999999999999999887766653 456899999
Q ss_pred eCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCC-eeEEEeCCCCCeEEEEEe----CCCcEEEEEcCCCc-cc
Q 036314 235 GGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSW-ISACKWHNKSWFHLISAS----YDGKVMLWDLRTAW-PL 308 (347)
Q Consensus 235 ~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~-v~~v~~s~~~~~~l~s~s----~D~~i~lwd~~~~~-~~ 308 (347)
+++ +.+|++++.|++|++||++.. ..+..+.+|.+. +..+.|.+++.. |++++ .|+.|++||+++.. ++
T Consensus 177 spd-G~lLatgs~Dg~IrIwD~rsg---~~v~tl~~H~~~~~~~~~w~~~~~~-ivt~G~s~s~Dr~VklWDlr~~~~p~ 251 (493)
T PTZ00421 177 NLD-GSLLCTTSKDKKLNIIDPRDG---TIVSSVEAHASAKSQRCLWAKRKDL-IITLGCSKSQQRQIMLWDTRKMASPY 251 (493)
T ss_pred ECC-CCEEEEecCCCEEEEEECCCC---cEEEEEecCCCCcceEEEEcCCCCe-EEEEecCCCCCCeEEEEeCCCCCCce
Confidence 765 568899999999999999853 236677888765 456889988765 55443 47999999998754 34
Q ss_pred eeecCCC-CeEEEEeec-CCCEEEEcc-CCceEEEeecc
Q 036314 309 SVIDSHK-DKVLCADWW-RGDSVISGG-VDSKLCVSSGV 344 (347)
Q Consensus 309 ~~~~~h~-~~v~~~~~~-~~~~l~s~s-~D~~v~vw~~~ 344 (347)
.....+. ..+....|+ +++.|++++ .|++|++|+..
T Consensus 252 ~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~ 290 (493)
T PTZ00421 252 STVDLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELM 290 (493)
T ss_pred eEeccCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEee
Confidence 4444333 344555565 466787777 59999999865
No 91
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=99.96 E-value=7.5e-27 Score=199.22 Aligned_cols=277 Identities=18% Similarity=0.237 Sum_probs=213.3
Q ss_pred CceeeccCCC-CCEEEEEecCCeEEEEcCC-CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEecccccc
Q 036314 25 DWVSAVDGSN-PGFILTGCYDNLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEEL 102 (347)
Q Consensus 25 ~~v~~~~~~~-~~~l~sg~~d~~i~iw~~~-~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~ 102 (347)
..|++++..+ ...++|||.|.++-++|.. +..+.+|.||+..|..+.++++. ..++++|.|..|++|......
T Consensus 220 pgi~ald~~~s~~~ilTGG~d~~av~~d~~s~q~l~~~~Gh~kki~~v~~~~~~----~~v~~aSad~~i~vws~~~~s- 294 (506)
T KOG0289|consen 220 PGITALDIIPSSSKILTGGEDKTAVLFDKPSNQILATLKGHTKKITSVKFHKDL----DTVITASADEIIRVWSVPLSS- 294 (506)
T ss_pred CCeeEEeecCCCCcceecCCCCceEEEecchhhhhhhccCcceEEEEEEeccch----hheeecCCcceEEeecccccc-
Confidence 5577777654 3689999999999999964 66788999999999999999854 368999999999999986542
Q ss_pred ccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccc
Q 036314 103 VNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTL 182 (347)
Q Consensus 103 ~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (347)
+....+.|..+|+.+..+|+|.+|++++.|+++...|++++.. +...
T Consensus 295 --------~~~~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~-------------------------lt~v 341 (506)
T KOG0289|consen 295 --------EPTSSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQ-------------------------LTVV 341 (506)
T ss_pred --------CccccccccccceeeeeccCCcEEEEecCCceEEEEEccCCcE-------------------------EEEE
Confidence 2335678999999999999999999999999999999886532 1110
Q ss_pred c--CCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeeeeC-eeeEEEEeeCCCCcEEEEecCCCcEEEEeCCC
Q 036314 183 V--GHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCG-KALNCIDIGGEGSALIAAGGSDPILRIWDPRK 258 (347)
Q Consensus 183 ~--~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~ 258 (347)
. +..-.+.+.+| |+|..+.+|..|+.+++||+..+..+..+..+ .++..+.|+. ++..+|++.+|+.|++||+|+
T Consensus 342 s~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~~~a~Fpght~~vk~i~FsE-NGY~Lat~add~~V~lwDLRK 420 (506)
T KOG0289|consen 342 SDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQTNVAKFPGHTGPVKAISFSE-NGYWLATAADDGSVKLWDLRK 420 (506)
T ss_pred eeccccceeEEeeEcCCceEEeccCCCceEEEEEcCCccccccCCCCCCceeEEEecc-CceEEEEEecCCeEEEEEehh
Confidence 0 01123566666 68888999999999999999988776666543 4789999964 567899999999999999997
Q ss_pred CCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcC--CCccceeecCCCCeEEEEeec-CCCEEEEccCC
Q 036314 259 PGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLR--TAWPLSVIDSHKDKVLCADWW-RGDSVISGGVD 335 (347)
Q Consensus 259 ~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~--~~~~~~~~~~h~~~v~~~~~~-~~~~l~s~s~D 335 (347)
.... +.+.+. ....+.++.|.+.|.+ |+.++.|=+|.+++-. ....+..+..|.+...++.|. ..++++++|+|
T Consensus 421 l~n~-kt~~l~-~~~~v~s~~fD~SGt~-L~~~g~~l~Vy~~~k~~k~W~~~~~~~~~sg~st~v~Fg~~aq~l~s~smd 497 (506)
T KOG0289|consen 421 LKNF-KTIQLD-EKKEVNSLSFDQSGTY-LGIAGSDLQVYICKKKTKSWTEIKELADHSGLSTGVRFGEHAQYLASTSMD 497 (506)
T ss_pred hccc-ceeecc-ccccceeEEEcCCCCe-EEeecceeEEEEEecccccceeeehhhhcccccceeeecccceEEeeccch
Confidence 5421 223332 2336899999988865 7777666555555422 345567777888899999996 56789999999
Q ss_pred ceEEEeec
Q 036314 336 SKLCVSSG 343 (347)
Q Consensus 336 ~~v~vw~~ 343 (347)
..++|++.
T Consensus 498 ~~l~~~a~ 505 (506)
T KOG0289|consen 498 AILRLYAL 505 (506)
T ss_pred hheEEeec
Confidence 99998863
No 92
>PTZ00420 coronin; Provisional
Probab=99.96 E-value=2.3e-26 Score=213.33 Aligned_cols=228 Identities=20% Similarity=0.268 Sum_probs=169.2
Q ss_pred EccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCC-CCEEEEeeCCCcEEEEecCCCCCCCccceeeec
Q 036314 85 TASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETS-GNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKR 163 (347)
Q Consensus 85 s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~-~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~ 163 (347)
.|+.++.|++|++... .++..+.+|.++|.+++|+|+ +.+|+||+.|++|+|||+.+.......
T Consensus 49 gGG~~gvI~L~~~~r~---------~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~------ 113 (568)
T PTZ00420 49 GGGLIGAIRLENQMRK---------PPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKE------ 113 (568)
T ss_pred CCCceeEEEeeecCCC---------ceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccc------
Confidence 4778899999997532 245678899999999999997 789999999999999998753210000
Q ss_pred cCCCccccccccccccccccCCccceEEEEeC-CCCe-EEEEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcE
Q 036314 164 KGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP-QQET-IYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSAL 241 (347)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~-l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (347)
....+..+.+|...|.++.|+ .+.. |++++.|++|++||+++++.+..+.....+.+++|+++ +.+
T Consensus 114 -----------i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~~~~~V~Slswspd-G~l 181 (568)
T PTZ00420 114 -----------IKDPQCILKGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQINMPKKLSSLKWNIK-GNL 181 (568)
T ss_pred -----------cccceEEeecCCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEecCCcEEEEEECCC-CCE
Confidence 011234577899999999995 4554 57999999999999999887766665667899999765 567
Q ss_pred EEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeE-----EEeCCCCCeEEEEEeCCC----cEEEEEcCC-Cccceee
Q 036314 242 IAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISA-----CKWHNKSWFHLISASYDG----KVMLWDLRT-AWPLSVI 311 (347)
Q Consensus 242 la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~-----v~~s~~~~~~l~s~s~D~----~i~lwd~~~-~~~~~~~ 311 (347)
|++++.|+.|+|||++.. ..+.++.+|.+.+.+ ..|++++. +|+|++.|+ +|+|||++. ..++..+
T Consensus 182 Lat~s~D~~IrIwD~Rsg---~~i~tl~gH~g~~~s~~v~~~~fs~d~~-~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~ 257 (568)
T PTZ00420 182 LSGTCVGKHMHIIDPRKQ---EIASSFHIHDGGKNTKNIWIDGLGGDDN-YILSTGFSKNNMREMKLWDLKNTTSALVTM 257 (568)
T ss_pred EEEEecCCEEEEEECCCC---cEEEEEecccCCceeEEEEeeeEcCCCC-EEEEEEcCCCCccEEEEEECCCCCCceEEE
Confidence 888889999999999863 335678889876433 23457775 477777664 799999995 4556554
Q ss_pred c--CCCCeEEEEeecC-CCEEEEccCCceEEEeec
Q 036314 312 D--SHKDKVLCADWWR-GDSVISGGVDSKLCVSSG 343 (347)
Q Consensus 312 ~--~h~~~v~~~~~~~-~~~l~s~s~D~~v~vw~~ 343 (347)
. .+.+.+...-..+ |.++++|+.|++|++|..
T Consensus 258 ~ld~~~~~L~p~~D~~tg~l~lsGkGD~tIr~~e~ 292 (568)
T PTZ00420 258 SIDNASAPLIPHYDESTGLIYLIGKGDGNCRYYQH 292 (568)
T ss_pred EecCCccceEEeeeCCCCCEEEEEECCCeEEEEEc
Confidence 3 3333333222233 678999999999999985
No 93
>KOG0301 consensus Phospholipase A2-activating protein (contains WD40 repeats) [Lipid transport and metabolism]
Probab=99.96 E-value=5.5e-27 Score=210.43 Aligned_cols=240 Identities=23% Similarity=0.405 Sum_probs=193.4
Q ss_pred EEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEE-EEEeC-CCCE
Q 036314 56 CTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHS-IAAET-SGNM 133 (347)
Q Consensus 56 ~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~-v~~s~-~~~~ 133 (347)
..+.+.||...|..+.+.+. ..++++|.||++|+|+-..++.+ ....+.+|.+.|.. ++|.+ ++-.
T Consensus 6 ls~~l~gH~~DVr~v~~~~~-----~~i~s~sRd~t~~vw~~~~~~~l-------~~~~~~~~~g~i~~~i~y~e~~~~~ 73 (745)
T KOG0301|consen 6 LSHELEGHKSDVRAVAVTDG-----VCIISGSRDGTVKVWAKKGKQYL-------ETHAFEGPKGFIANSICYAESDKGR 73 (745)
T ss_pred eEEEeccCccchheeEecCC-----eEEeecCCCCceeeeeccCcccc-------cceecccCcceeeccceeccccCcc
Confidence 45789999999988876542 36899999999999997655432 23456778888876 77764 4456
Q ss_pred EEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeCCCCeEEEEecCCcEEEEE
Q 036314 134 VCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWD 213 (347)
Q Consensus 134 l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~dg~v~vwd 213 (347)
+++|+.|.+|.+|..... .++.++.+|...|+++.......++|||+|.++++|-
T Consensus 74 l~~g~~D~~i~v~~~~~~-------------------------~P~~~LkgH~snVC~ls~~~~~~~iSgSWD~TakvW~ 128 (745)
T KOG0301|consen 74 LVVGGMDTTIIVFKLSQA-------------------------EPLYTLKGHKSNVCSLSIGEDGTLISGSWDSTAKVWR 128 (745)
T ss_pred eEeecccceEEEEecCCC-------------------------CchhhhhccccceeeeecCCcCceEecccccceEEec
Confidence 899999999999987642 4577899999999999865555699999999999996
Q ss_pred CCCCceeeeeeeC-eeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEe
Q 036314 214 VEMGKDLSDIFCG-KALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISAS 292 (347)
Q Consensus 214 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s 292 (347)
.. ++...+..+ ..+..+..-+.+ .+++|+.|.+|++|.-. ..+.+|++|++.|+.+++-|++ .++||+
T Consensus 129 ~~--~l~~~l~gH~asVWAv~~l~e~--~~vTgsaDKtIklWk~~-----~~l~tf~gHtD~VRgL~vl~~~--~flScs 197 (745)
T KOG0301|consen 129 IG--ELVYSLQGHTASVWAVASLPEN--TYVTGSADKTIKLWKGG-----TLLKTFSGHTDCVRGLAVLDDS--HFLSCS 197 (745)
T ss_pred ch--hhhcccCCcchheeeeeecCCC--cEEeccCcceeeeccCC-----chhhhhccchhheeeeEEecCC--CeEeec
Confidence 53 344445433 457777665554 77899999999999642 2467899999999999999886 389999
Q ss_pred CCCcEEEEEcCCCccceeecCCCCeEEEEee-cCCCEEEEccCCceEEEeecc
Q 036314 293 YDGKVMLWDLRTAWPLSVIDSHKDKVLCADW-WRGDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 293 ~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~D~~v~vw~~~ 344 (347)
.||.|++|++ +++.+.++.+|++.|+++.. .+++.++|+|.|++++||..-
T Consensus 198 NDg~Ir~w~~-~ge~l~~~~ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~~ 249 (745)
T KOG0301|consen 198 NDGSIRLWDL-DGEVLLEMHGHTNFVYSISMALSDGLIVSTGEDRTLRIWKKD 249 (745)
T ss_pred CCceEEEEec-cCceeeeeeccceEEEEEEecCCCCeEEEecCCceEEEeecC
Confidence 9999999999 67889999999999999995 467789999999999999864
No 94
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=99.96 E-value=9.4e-27 Score=208.14 Aligned_cols=240 Identities=19% Similarity=0.331 Sum_probs=201.8
Q ss_pred cCCceeeccCC-CCCEEEEEecCCeEEEEcCC-CeEEEEeec-cCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccc
Q 036314 23 HDDWVSAVDGS-NPGFILTGCYDNLGRVWKAG-GVCTHILEG-HCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDA 99 (347)
Q Consensus 23 h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~-~~~~~~l~~-h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~ 99 (347)
+++.|+++.++ +|++||.|-.+|+++|||.. .+.+..+.+ |...|.+++|.. ..+.+|+.|+.|..+|+..
T Consensus 216 ~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~~~~h~~rvg~laW~~------~~lssGsr~~~I~~~dvR~ 289 (484)
T KOG0305|consen 216 GEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTLRGSHASRVGSLAWNS------SVLSSGSRDGKILNHDVRI 289 (484)
T ss_pred CCCceEEEEECCCCCEEEEeecCCeEEEEehhhccccccccCCcCceeEEEeccC------ceEEEecCCCcEEEEEEec
Confidence 37999999988 67899999999999999974 455667787 999999999963 3689999999999999976
Q ss_pred cccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccccccc
Q 036314 100 EELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAI 179 (347)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (347)
.+.. ..++.+|...|-.+.|++|+.++|||+.|+.+.|||.... ...
T Consensus 290 ~~~~--------~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~-------------------------~p~ 336 (484)
T KOG0305|consen 290 SQHV--------VSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSP-------------------------EPK 336 (484)
T ss_pred chhh--------hhhhhcccceeeeeEECCCCCeeccCCCccceEeccCCCc-------------------------ccc
Confidence 5432 1247789999999999999999999999999999998432 234
Q ss_pred ccccCCccceEEEEeC--CCCeEEEE--ecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEe-cCCCcEEEE
Q 036314 180 STLVGHTQCVSSVVWP--QQETIYSA--SWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAG-GSDPILRIW 254 (347)
Q Consensus 180 ~~~~~h~~~v~~~~~~--~~~~l~s~--s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~-~~d~~i~iw 254 (347)
..+..|+.+|.+++|. ....||+| +.|+.|++||+.++..+..+..+..+..+.|++....++.+. ..++.|.||
T Consensus 337 ~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vdtgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw 416 (484)
T KOG0305|consen 337 FTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVDTGSQVCSLIWSKKYKELLSTHGYSENQITLW 416 (484)
T ss_pred EEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEecccccCCceeeEEEcCCCCEEEEecCCCCCcEEEE
Confidence 5678899999999994 45677775 678999999999999999888888999999987766666554 457899999
Q ss_pred eCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCC
Q 036314 255 DPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTA 305 (347)
Q Consensus 255 d~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~ 305 (347)
+... ...+..+.+|...|..++++||+. .+++|+.|.++++|++=..
T Consensus 417 ~~ps---~~~~~~l~gH~~RVl~la~SPdg~-~i~t~a~DETlrfw~~f~~ 463 (484)
T KOG0305|consen 417 KYPS---MKLVAELLGHTSRVLYLALSPDGE-TIVTGAADETLRFWNLFDE 463 (484)
T ss_pred eccc---cceeeeecCCcceeEEEEECCCCC-EEEEecccCcEEeccccCC
Confidence 9764 345778899999999999999986 5999999999999998653
No 95
>KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.95 E-value=2.5e-27 Score=211.20 Aligned_cols=231 Identities=23% Similarity=0.405 Sum_probs=185.9
Q ss_pred EEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCcccee
Q 036314 81 VTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSI 160 (347)
Q Consensus 81 ~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~ 160 (347)
++|+||+.||.|++|++....- .........+..|.+.|+.++...+++.|+|+|.|-+|++|+.....
T Consensus 38 ryLfTgGRDg~i~~W~~~~d~~---~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~-------- 106 (735)
T KOG0308|consen 38 RYLFTGGRDGIIRLWSVTQDSN---EPSTPYIASMEHHSDWVNDIILCGNGKTLISASSDTTVKVWNAHKDN-------- 106 (735)
T ss_pred ceEEecCCCceEEEeccccccC---CcccchhhhhhhhHhHHhhHHhhcCCCceEEecCCceEEEeecccCc--------
Confidence 4799999999999999863211 01112356778899999999999999999999999999999976531
Q ss_pred eeccCCCccccccccccccccccCCccceEEEEe--CCCCeEEEEecCCcEEEEECCCCce--eeee--------e--eC
Q 036314 161 KKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW--PQQETIYSASWDHSVRTWDVEMGKD--LSDI--------F--CG 226 (347)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~--~~~~~l~s~s~dg~v~vwd~~~~~~--~~~~--------~--~~ 226 (347)
.-+..++..|.++|.++++ ++...++||+.|+.|.+||++++.. +... . +.
T Consensus 107 ---------------~~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k 171 (735)
T KOG0308|consen 107 ---------------TFCMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPK 171 (735)
T ss_pred ---------------chhHhhhhcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCc
Confidence 1356678889999999998 3566799999999999999997732 2211 1 12
Q ss_pred eeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCc
Q 036314 227 KALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAW 306 (347)
Q Consensus 227 ~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~ 306 (347)
..++.++..+. +..|++|+..+.+++||++.. ..+..+.||++-|..+..++||. .++|+|.||+|+|||++...
T Consensus 172 ~siYSLA~N~t-~t~ivsGgtek~lr~wDprt~---~kimkLrGHTdNVr~ll~~dDGt-~~ls~sSDgtIrlWdLgqQr 246 (735)
T KOG0308|consen 172 DSIYSLAMNQT-GTIIVSGGTEKDLRLWDPRTC---KKIMKLRGHTDNVRVLLVNDDGT-RLLSASSDGTIRLWDLGQQR 246 (735)
T ss_pred cceeeeecCCc-ceEEEecCcccceEEeccccc---cceeeeeccccceEEEEEcCCCC-eEeecCCCceEEeeeccccc
Confidence 35677777544 468899999999999999853 34677789999999999999985 59999999999999999989
Q ss_pred cceeecCCCCeEEEEeecCC-CEEEEccCCceEEEee
Q 036314 307 PLSVIDSHKDKVLCADWWRG-DSVISGGVDSKLCVSS 342 (347)
Q Consensus 307 ~~~~~~~h~~~v~~~~~~~~-~~l~s~s~D~~v~vw~ 342 (347)
+++++..|++.||++.-++. +.+-+|+.||.|..-+
T Consensus 247 Cl~T~~vH~e~VWaL~~~~sf~~vYsG~rd~~i~~Td 283 (735)
T KOG0308|consen 247 CLATYIVHKEGVWALQSSPSFTHVYSGGRDGNIYRTD 283 (735)
T ss_pred eeeeEEeccCceEEEeeCCCcceEEecCCCCcEEecc
Confidence 99999999999999888764 4689999999987543
No 96
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.95 E-value=2e-26 Score=199.35 Aligned_cols=237 Identities=20% Similarity=0.290 Sum_probs=190.0
Q ss_pred CCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcE
Q 036314 64 CGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTI 143 (347)
Q Consensus 64 ~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I 143 (347)
...|.++.|+|....+ ..+|+|. .+.+|+..+.. ..+++...++.|.++.|-.||++++.|...|.|
T Consensus 26 ~~~vssl~fsp~~P~d--~aVt~S~--rvqly~~~~~~---------~~k~~srFk~~v~s~~fR~DG~LlaaGD~sG~V 92 (487)
T KOG0310|consen 26 HNSVSSLCFSPKHPYD--FAVTSSV--RVQLYSSVTRS---------VRKTFSRFKDVVYSVDFRSDGRLLAAGDESGHV 92 (487)
T ss_pred cCcceeEecCCCCCCc--eEEeccc--EEEEEecchhh---------hhhhHHhhccceeEEEeecCCeEEEccCCcCcE
Confidence 3669999999976653 3455554 69999875432 333455678889999999999999999999999
Q ss_pred EEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeC--CCCeEEEEecCCcEEEEECCCCceee
Q 036314 144 SLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP--QQETIYSASWDHSVRTWDVEMGKDLS 221 (347)
Q Consensus 144 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~l~s~s~dg~v~vwd~~~~~~~~ 221 (347)
+|||+.+ ...++.+.+|+.++..+.|+ ++..+++|+.|+.+++||+.+.....
T Consensus 93 ~vfD~k~-------------------------r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~ 147 (487)
T KOG0310|consen 93 KVFDMKS-------------------------RVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQA 147 (487)
T ss_pred EEecccc-------------------------HHHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEE
Confidence 9999542 24578899999999999885 44568899999999999998877543
Q ss_pred eeee-CeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEE
Q 036314 222 DIFC-GKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLW 300 (347)
Q Consensus 222 ~~~~-~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lw 300 (347)
.+.. ...+.|.++.|....++++|++||+|++||++... ..+..+ .|..+|.++.+-|.|. ++|+|+. ..||||
T Consensus 148 ~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~--~~v~el-nhg~pVe~vl~lpsgs-~iasAgG-n~vkVW 222 (487)
T KOG0310|consen 148 ELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLT--SRVVEL-NHGCPVESVLALPSGS-LIASAGG-NSVKVW 222 (487)
T ss_pred EecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCC--ceeEEe-cCCCceeeEEEcCCCC-EEEEcCC-CeEEEE
Confidence 4443 34789999999888899999999999999998643 335565 5899999999999875 4777664 579999
Q ss_pred EcCCC-ccceeecCCCCeEEEEeec-CCCEEEEccCCceEEEeec
Q 036314 301 DLRTA-WPLSVIDSHKDKVLCADWW-RGDSVISGGVDSKLCVSSG 343 (347)
Q Consensus 301 d~~~~-~~~~~~~~h~~~v~~~~~~-~~~~l~s~s~D~~v~vw~~ 343 (347)
|+.+| +.+..+..|...|+|+.+. ++.+|.|||.|+.|+|++.
T Consensus 223 Dl~~G~qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~ 267 (487)
T KOG0310|consen 223 DLTTGGQLLTSMFNHNKTVTCLRLASDSTRLLSGSLDRHVKVFDT 267 (487)
T ss_pred EecCCceehhhhhcccceEEEEEeecCCceEeecccccceEEEEc
Confidence 99865 4455555699999999995 6889999999999999994
No 97
>KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.95 E-value=6.3e-26 Score=194.92 Aligned_cols=274 Identities=22% Similarity=0.325 Sum_probs=207.0
Q ss_pred CCCcCCceeeccCCC-CCEEEEEecCCeEEEEcCC-CeEE-----E-----------Ee--eccCCceEEEEEeecCCCc
Q 036314 20 PSLHDDWVSAVDGSN-PGFILTGCYDNLGRVWKAG-GVCT-----H-----------IL--EGHCGAVSSVNIIKSDGLK 79 (347)
Q Consensus 20 ~~~h~~~v~~~~~~~-~~~l~sg~~d~~i~iw~~~-~~~~-----~-----------~l--~~h~~~V~~v~~~~~~~~~ 79 (347)
...|.-.|+++++++ +.+..+++.|++|.=|+.. |+.. . .. .+|-..+.++++++ +
T Consensus 138 ~~~H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~----D 213 (479)
T KOG0299|consen 138 IGKHQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSS----D 213 (479)
T ss_pred eccccCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcC----C
Confidence 457999999999984 5699999999999999852 3211 0 01 27888999999998 4
Q ss_pred eEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccce
Q 036314 80 YVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVS 159 (347)
Q Consensus 80 ~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~ 159 (347)
+.+||+|+.|..|.||+..+.+ .++.+.+|.++|.+++|-..-..++++|.|.+|++|+++..
T Consensus 214 gkylatgg~d~~v~Iw~~~t~e---------hv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~-------- 276 (479)
T KOG0299|consen 214 GKYLATGGRDRHVQIWDCDTLE---------HVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQL-------- 276 (479)
T ss_pred CcEEEecCCCceEEEecCcccc---------hhhcccccccceeeeeeecCccceeeeecCCceEEEehhHh--------
Confidence 4689999999999999988764 34568899999999999877789999999999999998742
Q ss_pred eeeccCCCccccccccccccccccCCccceEEEEeCCCCeEEEEe-cCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCC
Q 036314 160 IKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQETIYSAS-WDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEG 238 (347)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s-~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (347)
..+.++-||.+.|.++.-..-+.++|++ .|+++++|++.....+.-......+.|++|-.
T Consensus 277 -----------------s~vetlyGHqd~v~~IdaL~reR~vtVGgrDrT~rlwKi~eesqlifrg~~~sidcv~~In-- 337 (479)
T KOG0299|consen 277 -----------------SYVETLYGHQDGVLGIDALSRERCVTVGGRDRTVRLWKIPEESQLIFRGGEGSIDCVAFIN-- 337 (479)
T ss_pred -----------------HHHHHHhCCccceeeechhcccceEEeccccceeEEEeccccceeeeeCCCCCeeeEEEec--
Confidence 3466788999999998755555666655 99999999995543332222233578888843
Q ss_pred CcEEEEecCCCcEEEEeCCCCCCCCCeEEec------------CCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCC-
Q 036314 239 SALIAAGGSDPILRIWDPRKPGTSAPVFQFS------------SHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTA- 305 (347)
Q Consensus 239 ~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~------------~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~- 305 (347)
..++++|+.+|.|.+|++.+. +|+++.. .+..||++++..|... ++|+||.+|.||||-+..+
T Consensus 338 ~~HfvsGSdnG~IaLWs~~KK---kplf~~~~AHgv~~~~~~~~~~~Witsla~i~~sd-L~asGS~~G~vrLW~i~~g~ 413 (479)
T KOG0299|consen 338 DEHFVSGSDNGSIALWSLLKK---KPLFTSRLAHGVIPELDPVNGNFWITSLAVIPGSD-LLASGSWSGCVRLWKIEDGL 413 (479)
T ss_pred ccceeeccCCceEEEeeeccc---CceeEeeccccccCCccccccccceeeeEecccCc-eEEecCCCCceEEEEecCCc
Confidence 347899999999999998653 2333221 1224999999998764 7999999999999999887
Q ss_pred ---ccceeecCCCCeEEEEeec-CCCE-EEEccCCceE
Q 036314 306 ---WPLSVIDSHKDKVLCADWW-RGDS-VISGGVDSKL 338 (347)
Q Consensus 306 ---~~~~~~~~h~~~v~~~~~~-~~~~-l~s~s~D~~v 338 (347)
.++..+. -.+-|.++.|+ .|.+ +|..+....+
T Consensus 414 r~i~~l~~ls-~~GfVNsl~f~~sgk~ivagiGkEhRl 450 (479)
T KOG0299|consen 414 RAINLLYSLS-LVGFVNSLAFSNSGKRIVAGIGKEHRL 450 (479)
T ss_pred cccceeeecc-cccEEEEEEEccCCCEEEEeccccccc
Confidence 2333443 46789999997 4664 5555555444
No 98
>KOG1408 consensus WD40 repeat protein [Function unknown]
Probab=99.95 E-value=1.6e-26 Score=208.00 Aligned_cols=280 Identities=17% Similarity=0.222 Sum_probs=210.9
Q ss_pred CcCCceeeccC-C-----------CCCEEEEEecCCeEEEEcCCC----eEEE--Ee-----------------------
Q 036314 22 LHDDWVSAVDG-S-----------NPGFILTGCYDNLGRVWKAGG----VCTH--IL----------------------- 60 (347)
Q Consensus 22 ~h~~~v~~~~~-~-----------~~~~l~sg~~d~~i~iw~~~~----~~~~--~l----------------------- 60 (347)
-|...|+.+.. . +.+-++|+|.|+|||+|++.+ ...+ +|
T Consensus 367 yHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSsD~TIRlW~l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~~ 446 (1080)
T KOG1408|consen 367 YHSACIWDVENLPCNVHSPTAACLPRGCFTTCSSDGTIRLWDLAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHDASAG 446 (1080)
T ss_pred eccceeeeeccccccccCcccccCCccceeEecCCCcEEEeecccccccceeecccchhhhhcCccccCchhhhhhccCC
Confidence 47777776652 1 235699999999999998753 1110 00
Q ss_pred ---------eccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCC-
Q 036314 61 ---------EGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETS- 130 (347)
Q Consensus 61 ---------~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~- 130 (347)
.+....|.+++++|+ +++||+|..-|++|+|++...+ ....+.+|+..|.|+.|+..
T Consensus 447 ~fdka~~s~~d~r~G~R~~~vSp~----gqhLAsGDr~GnlrVy~Lq~l~---------~~~~~eAHesEilcLeyS~p~ 513 (1080)
T KOG1408|consen 447 IFDKALVSTCDSRFGFRALAVSPD----GQHLASGDRGGNLRVYDLQELE---------YTCFMEAHESEILCLEYSFPV 513 (1080)
T ss_pred cccccchhhcCcccceEEEEECCC----cceecccCccCceEEEEehhhh---------hhhheecccceeEEEeecCch
Confidence 011124789999984 4589999999999999997643 33456799999999998643
Q ss_pred --CCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeC-CC--CeEEEEec
Q 036314 131 --GNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP-QQ--ETIYSASW 205 (347)
Q Consensus 131 --~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~--~~l~s~s~ 205 (347)
.++|+++|.|.-|.|||+... -..++++.+|...|.++.|. .+ ..+++++.
T Consensus 514 ~~~kLLASasrdRlIHV~Dv~rn------------------------y~l~qtld~HSssITsvKFa~~gln~~MiscGA 569 (1080)
T KOG1408|consen 514 LTNKLLASASRDRLIHVYDVKRN------------------------YDLVQTLDGHSSSITSVKFACNGLNRKMISCGA 569 (1080)
T ss_pred hhhHhhhhccCCceEEEEecccc------------------------cchhhhhcccccceeEEEEeecCCceEEEeccC
Confidence 479999999999999998642 23467899999999999884 22 46889999
Q ss_pred CCcEEEEECCC----Cceee---eeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEec---CCCCCe
Q 036314 206 DHSVRTWDVEM----GKDLS---DIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFS---SHNSWI 275 (347)
Q Consensus 206 dg~v~vwd~~~----~~~~~---~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~---~h~~~v 275 (347)
|+.| +++... +.... .......++.+++.|. ..+++++++|.+|+|||+...+. .+.|. +|.+..
T Consensus 570 Dksi-mFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~-~k~v~t~cQDrnirif~i~sgKq---~k~FKgs~~~eG~l 644 (1080)
T KOG1408|consen 570 DKSI-MFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPT-SKLVVTVCQDRNIRIFDIESGKQ---VKSFKGSRDHEGDL 644 (1080)
T ss_pred chhh-heehhccccCceeccccccccccceEEEeeeCCC-cceEEEEecccceEEEeccccce---eeeecccccCCCce
Confidence 9876 444433 11110 0011234677777654 55889999999999999987543 33443 455566
Q ss_pred eEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeecCCCE-EEEccCCceEEEeecc
Q 036314 276 SACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDS-VISGGVDSKLCVSSGV 344 (347)
Q Consensus 276 ~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~D~~v~vw~~~ 344 (347)
-.+...|.+. +||+.+.|+++-++|.-+|+++.++.||.+.|+++.|.++.+ |++++.||.|.||..+
T Consensus 645 IKv~lDPSgi-Y~atScsdktl~~~Df~sgEcvA~m~GHsE~VTG~kF~nDCkHlISvsgDgCIFvW~lp 713 (1080)
T KOG1408|consen 645 IKVILDPSGI-YLATSCSDKTLCFVDFVSGECVAQMTGHSEAVTGVKFLNDCKHLISVSGDGCIFVWKLP 713 (1080)
T ss_pred EEEEECCCcc-EEEEeecCCceEEEEeccchhhhhhcCcchheeeeeecccchhheeecCCceEEEEECc
Confidence 7788999986 599999999999999999999999999999999999988764 9999999999999987
No 99
>KOG0321 consensus WD40 repeat-containing protein L2DTL [Function unknown]
Probab=99.95 E-value=5.2e-26 Score=202.43 Aligned_cols=305 Identities=18% Similarity=0.239 Sum_probs=213.1
Q ss_pred cCCceeecc--CC--C--CCEEEEEecCCeEEEEcCCCe-------EEEEeeccCCceEEEEEeecCCCceEEEEEccCC
Q 036314 23 HDDWVSAVD--GS--N--PGFILTGCYDNLGRVWKAGGV-------CTHILEGHCGAVSSVNIIKSDGLKYVTVATASKD 89 (347)
Q Consensus 23 h~~~v~~~~--~~--~--~~~l~sg~~d~~i~iw~~~~~-------~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~D 89 (347)
|..+++.++ |+ + .++|+-+-.||.|.++|.... ....+..|-+.|..+.|.| +. ..|++++.|
T Consensus 46 ~~~p~pPf~~sFs~~~n~eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wap-ge---~~lVsasGD 121 (720)
T KOG0321|consen 46 DGLPVPPFADSFSAAPNKEHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAP-GE---SLLVSASGD 121 (720)
T ss_pred CCCCCCCccccccCCCCccceEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCC-Cc---eeEEEccCC
Confidence 556676633 54 2 358999999999999986421 1345678999999999998 32 369999999
Q ss_pred CcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCC-CEEEEeeCCCcEEEEecCCCCCCCccc---eeeeccC
Q 036314 90 QTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSG-NMVCSGSWDCTISLWRTNDSDAAGNQV---SIKKRKG 165 (347)
Q Consensus 90 g~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~-~~l~sgs~Dg~I~iwd~~~~~~~~~~~---~~~~~~~ 165 (347)
.++|.||++.+++.. ...+.||...|.+++|.++. ..|++|++||.|.|||++......... .+.....
T Consensus 122 sT~r~Wdvk~s~l~G-------~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n 194 (720)
T KOG0321|consen 122 STIRPWDVKTSRLVG-------GRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHN 194 (720)
T ss_pred ceeeeeeeccceeec-------ceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhcccc
Confidence 999999999876532 22467999999999999976 588899999999999987432110000 0000000
Q ss_pred CCccccccccccccccccCCccc----eEEEEeCCCCeEEEEec-CCcEEEEECCCCceeeeee--------e----Cee
Q 036314 166 NNQVEEPQLEGEAISTLVGHTQC----VSSVVWPQQETIYSASW-DHSVRTWDVEMGKDLSDIF--------C----GKA 228 (347)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~h~~~----v~~~~~~~~~~l~s~s~-dg~v~vwd~~~~~~~~~~~--------~----~~~ 228 (347)
..... .....+.+.....|... |..+.|.|...|++++. |+.|+|||++......... . ...
T Consensus 195 ~~ptp-skp~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G 273 (720)
T KOG0321|consen 195 TAPTP-SKPLKKRIRKWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVG 273 (720)
T ss_pred CCCCC-CchhhccccccccccCceeeeeEEEEEeccceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceee
Confidence 00000 00001112223334333 55567778889999888 9999999998765433221 1 124
Q ss_pred eEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCC---CeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCC
Q 036314 229 LNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNS---WISACKWHNKSWFHLISASYDGKVMLWDLRTA 305 (347)
Q Consensus 229 ~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~---~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~ 305 (347)
+.++.....+..++|.+. |+.|++|+++... ..+.+.+.++.. +|. -..+|++. +|++|+.|....+|.+.+.
T Consensus 274 ~~nL~lDssGt~L~AsCt-D~sIy~ynm~s~s-~sP~~~~sg~~~~sf~vk-s~lSpd~~-~l~SgSsd~~ayiw~vs~~ 349 (720)
T KOG0321|consen 274 QVNLILDSSGTYLFASCT-DNSIYFYNMRSLS-ISPVAEFSGKLNSSFYVK-SELSPDDC-SLLSGSSDEQAYIWVVSSP 349 (720)
T ss_pred eEEEEecCCCCeEEEEec-CCcEEEEeccccC-cCchhhccCcccceeeee-eecCCCCc-eEeccCCCcceeeeeecCc
Confidence 566666666677788776 9999999998643 345666666643 232 33678886 5999999999999999886
Q ss_pred c-cceeecCCCCeEEEEeecC--CCEEEEccCCceEEEeec
Q 036314 306 W-PLSVIDSHKDKVLCADWWR--GDSVISGGVDSKLCVSSG 343 (347)
Q Consensus 306 ~-~~~~~~~h~~~v~~~~~~~--~~~l~s~s~D~~v~vw~~ 343 (347)
+ +...+.||.-.|.+|.|.| ..-+|+++.|-+++||+.
T Consensus 350 e~~~~~l~Ght~eVt~V~w~pS~~t~v~TcSdD~~~kiW~l 390 (720)
T KOG0321|consen 350 EAPPALLLGHTREVTTVRWLPSATTPVATCSDDFRVKIWRL 390 (720)
T ss_pred cCChhhhhCcceEEEEEeeccccCCCceeeccCcceEEEec
Confidence 4 4567889999999999964 456899999999999986
No 100
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=99.95 E-value=2.9e-25 Score=178.18 Aligned_cols=282 Identities=16% Similarity=0.196 Sum_probs=212.5
Q ss_pred CCCCCcCCceeeccCC-CCCEEEEEecCCeEEEEcCCC-eEE--EEeeccCCceEEEEEeecCCCceEEEEEccCCCcEE
Q 036314 18 EEPSLHDDWVSAVDGS-NPGFILTGCYDNLGRVWKAGG-VCT--HILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLR 93 (347)
Q Consensus 18 ~~~~~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~~-~~~--~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~ 93 (347)
....+|...|.++++. +|..|++|+.|+++++|++.. ... ....+|.+.|-.+.|+|..+ ..+++++.|.+||
T Consensus 14 r~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~---d~~atas~dk~ir 90 (313)
T KOG1407|consen 14 RELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHP---DLFATASGDKTIR 90 (313)
T ss_pred HHhhhhhhcceEEEEcccCceeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCC---cceEEecCCceEE
Confidence 4566899999999976 788999999999999999753 222 24679999999999998654 3689999999999
Q ss_pred EEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccc
Q 036314 94 LWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQ 173 (347)
Q Consensus 94 ~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (347)
+||+..+++ ......-... .-+.|+|+|.+++.++.|..|...|.++.....
T Consensus 91 ~wd~r~~k~---------~~~i~~~~en-i~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~------------------ 142 (313)
T KOG1407|consen 91 IWDIRSGKC---------TARIETKGEN-INITWSPDGEYIAVGNKDDRITFIDARTYKIVN------------------ 142 (313)
T ss_pred EEEeccCcE---------EEEeeccCcc-eEEEEcCCCCEEEEecCcccEEEEEecccceee------------------
Confidence 999987653 2222222223 346899999999999999999999987532110
Q ss_pred ccccccccccCCccceEEEEeC-CCCeEEEEecCCcEEEEECCCCceeeeeeeC-eeeEEEEeeCCCCcEEEEecCCCcE
Q 036314 174 LEGEAISTLVGHTQCVSSVVWP-QQETIYSASWDHSVRTWDVEMGKDLSDIFCG-KALNCIDIGGEGSALIAAGGSDPIL 251 (347)
Q Consensus 174 ~~~~~~~~~~~h~~~v~~~~~~-~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~la~~~~d~~i 251 (347)
. ......+.-+.|. ++++++-....|.|.|.....-+++..+..+ ....|+.|+|. ++.+|+|+.|-.+
T Consensus 143 -------~-~~~~~e~ne~~w~~~nd~Fflt~GlG~v~ILsypsLkpv~si~AH~snCicI~f~p~-GryfA~GsADAlv 213 (313)
T KOG1407|consen 143 -------E-EQFKFEVNEISWNNSNDLFFLTNGLGCVEILSYPSLKPVQSIKAHPSNCICIEFDPD-GRYFATGSADALV 213 (313)
T ss_pred -------h-hcccceeeeeeecCCCCEEEEecCCceEEEEeccccccccccccCCcceEEEEECCC-CceEeecccccee
Confidence 0 0011235556664 4556666666789999887776777776643 34567888665 5689999999999
Q ss_pred EEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeecCCCE-EE
Q 036314 252 RIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDS-VI 330 (347)
Q Consensus 252 ~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~ 330 (347)
.+||+.. ......++.+.=+|+.+.||-+|. +||+||+|..|-|=++.+|..+..+. |.++-..|+|+|.+. ||
T Consensus 214 SLWD~~E---LiC~R~isRldwpVRTlSFS~dg~-~lASaSEDh~IDIA~vetGd~~~eI~-~~~~t~tVAWHPk~~LLA 288 (313)
T KOG1407|consen 214 SLWDVDE---LICERCISRLDWPVRTLSFSHDGR-MLASASEDHFIDIAEVETGDRVWEIP-CEGPTFTVAWHPKRPLLA 288 (313)
T ss_pred eccChhH---hhhheeeccccCceEEEEeccCcc-eeeccCccceEEeEecccCCeEEEee-ccCCceeEEecCCCceee
Confidence 9999873 445677888888999999999985 69999999999999999998877765 678889999998764 55
Q ss_pred EccCC---------ceEEEeecc
Q 036314 331 SGGVD---------SKLCVSSGV 344 (347)
Q Consensus 331 s~s~D---------~~v~vw~~~ 344 (347)
=+..| |+|+++..+
T Consensus 289 yA~ddk~~d~~reag~vKiFG~~ 311 (313)
T KOG1407|consen 289 YACDDKDGDSNREAGTVKIFGLS 311 (313)
T ss_pred EEecCCCCccccccceeEEecCC
Confidence 33332 577777544
No 101
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=99.95 E-value=1.1e-25 Score=180.54 Aligned_cols=244 Identities=19% Similarity=0.221 Sum_probs=192.5
Q ss_pred EEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCC-CEEEE
Q 036314 58 HILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSG-NMVCS 136 (347)
Q Consensus 58 ~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~-~~l~s 136 (347)
+.+.+|...|.+|+|..++ ..|++|+.|+++++|+++..++.. --..++|.+.|-.++++|.. .++++
T Consensus 14 r~~~~~~~~v~Sv~wn~~g----~~lasgs~dktv~v~n~e~~r~~~-------~~~~~gh~~svdql~w~~~~~d~~at 82 (313)
T KOG1407|consen 14 RELQGHVQKVHSVAWNCDG----TKLASGSFDKTVSVWNLERDRFRK-------ELVYRGHTDSVDQLCWDPKHPDLFAT 82 (313)
T ss_pred HHhhhhhhcceEEEEcccC----ceeeecccCCceEEEEecchhhhh-------hhcccCCCcchhhheeCCCCCcceEE
Confidence 4577899999999998844 469999999999999998654321 12457899999999998765 79999
Q ss_pred eeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeCCCCeEEEEecCCcEEEEECCC
Q 036314 137 GSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEM 216 (347)
Q Consensus 137 gs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~dg~v~vwd~~~ 216 (347)
++.|.+|++||+....+ ........+.+.-.-+|++++++.++.|..|...|.++
T Consensus 83 as~dk~ir~wd~r~~k~-------------------------~~~i~~~~eni~i~wsp~g~~~~~~~kdD~it~id~r~ 137 (313)
T KOG1407|consen 83 ASGDKTIRIWDIRSGKC-------------------------TARIETKGENINITWSPDGEYIAVGNKDDRITFIDART 137 (313)
T ss_pred ecCCceEEEEEeccCcE-------------------------EEEeeccCcceEEEEcCCCCEEEEecCcccEEEEEecc
Confidence 99999999999886432 21222222233333348999999999999999999998
Q ss_pred CceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCc
Q 036314 217 GKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGK 296 (347)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~ 296 (347)
.+.....+....+..+.+.-++ .++......|+|.|.... ..+++..+..|.....|+.|+|+|. +||+|+.|..
T Consensus 138 ~~~~~~~~~~~e~ne~~w~~~n-d~Fflt~GlG~v~ILsyp---sLkpv~si~AH~snCicI~f~p~Gr-yfA~GsADAl 212 (313)
T KOG1407|consen 138 YKIVNEEQFKFEVNEISWNNSN-DLFFLTNGLGCVEILSYP---SLKPVQSIKAHPSNCICIEFDPDGR-YFATGSADAL 212 (313)
T ss_pred cceeehhcccceeeeeeecCCC-CEEEEecCCceEEEEecc---ccccccccccCCcceEEEEECCCCc-eEeeccccce
Confidence 7776665555566667776444 444444557999998754 2456889999999999999999996 5999999999
Q ss_pred EEEEEcCCCccceeecCCCCeEEEEeec-CCCEEEEccCCceEEEee
Q 036314 297 VMLWDLRTAWPLSVIDSHKDKVLCADWW-RGDSVISGGVDSKLCVSS 342 (347)
Q Consensus 297 i~lwd~~~~~~~~~~~~h~~~v~~~~~~-~~~~l~s~s~D~~v~vw~ 342 (347)
+-|||++.-.++..+..+.-+|+.+.|+ +|++||+||.|..|-|-.
T Consensus 213 vSLWD~~ELiC~R~isRldwpVRTlSFS~dg~~lASaSEDh~IDIA~ 259 (313)
T KOG1407|consen 213 VSLWDVDELICERCISRLDWPVRTLSFSHDGRMLASASEDHFIDIAE 259 (313)
T ss_pred eeccChhHhhhheeeccccCceEEEEeccCcceeeccCccceEEeEe
Confidence 9999999888888899999999999997 899999999998886643
No 102
>KOG1332 consensus Vesicle coat complex COPII, subunit SEC13 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.95 E-value=6.4e-26 Score=180.33 Aligned_cols=253 Identities=19% Similarity=0.212 Sum_probs=186.7
Q ss_pred CCCCcCCceeeccCC-CCCEEEEEecCCeEEEEcCC--C--eEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEE
Q 036314 19 EPSLHDDWVSAVDGS-NPGFILTGCYDNLGRVWKAG--G--VCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLR 93 (347)
Q Consensus 19 ~~~~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~--~--~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~ 93 (347)
.-..|++-|-.+... -+..|||+|.|++|||+..+ + +.+..|.||.++|..++|.... -+..||++|.||.|.
T Consensus 6 idt~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk--~G~iLAScsYDgkVI 83 (299)
T KOG1332|consen 6 IDTQHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPK--FGTILASCSYDGKVI 83 (299)
T ss_pred hhhhhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccc--cCcEeeEeecCceEE
Confidence 345788888887765 57899999999999999853 3 5678899999999999996422 235899999999999
Q ss_pred EEeccccccccCccccceeeeeeccccceEEEEEeCC--CCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccc
Q 036314 94 LWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETS--GNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEE 171 (347)
Q Consensus 94 ~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~--~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 171 (347)
||.-+.++ +........|+..|++++|.|. |..|+.++.||.|.|.+.......
T Consensus 84 iWke~~g~-------w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w----------------- 139 (299)
T KOG1332|consen 84 IWKEENGR-------WTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGW----------------- 139 (299)
T ss_pred EEecCCCc-------hhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCc-----------------
Confidence 99977653 2333456789999999998775 689999999999999987653100
Q ss_pred ccccccccccccCCccceEEEEeC----CC-----------CeEEEEecCCcEEEEECCCCceee--eeeeC-eeeEEEE
Q 036314 172 PQLEGEAISTLVGHTQCVSSVVWP----QQ-----------ETIYSASWDHSVRTWDVEMGKDLS--DIFCG-KALNCID 233 (347)
Q Consensus 172 ~~~~~~~~~~~~~h~~~v~~~~~~----~~-----------~~l~s~s~dg~v~vwd~~~~~~~~--~~~~~-~~~~~~~ 233 (347)
...+....|+-.|+++.|. ++ .+|+||+.|+.|+||+...++... .+..+ .-+..++
T Consensus 140 -----~t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVA 214 (299)
T KOG1332|consen 140 -----TTSKIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLEGHKDWVRDVA 214 (299)
T ss_pred -----cchhhhhccccccceeeecCcCCCccccccCcccccceeeccCCccceeeeecCCcchhhhhhhhhcchhhhhhh
Confidence 0112334577777777772 12 469999999999999988764332 23322 2356667
Q ss_pred eeCCC---CcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcC
Q 036314 234 IGGEG---SALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLR 303 (347)
Q Consensus 234 ~~~~~---~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~ 303 (347)
+.|.- ...+|++++|+++-||..+....+-....+....+.+..+.||+.|. .|+.++.|..|.+|.-+
T Consensus 215 waP~~gl~~s~iAS~SqDg~viIwt~~~e~e~wk~tll~~f~~~~w~vSWS~sGn-~LaVs~GdNkvtlwke~ 286 (299)
T KOG1332|consen 215 WAPSVGLPKSTIASCSQDGTVIIWTKDEEYEPWKKTLLEEFPDVVWRVSWSLSGN-ILAVSGGDNKVTLWKEN 286 (299)
T ss_pred hccccCCCceeeEEecCCCcEEEEEecCccCcccccccccCCcceEEEEEecccc-EEEEecCCcEEEEEEeC
Confidence 76542 34789999999999998763212112233445667899999999985 68889999999999654
No 103
>KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics]
Probab=99.95 E-value=3.2e-26 Score=198.68 Aligned_cols=280 Identities=19% Similarity=0.292 Sum_probs=220.7
Q ss_pred CCCcCCceeeccCCCC-CEEEEEecCCeEEEEcCCCe----EEEEeec--cCCceEEEEEeecCCCceEEEEEccCCCcE
Q 036314 20 PSLHDDWVSAVDGSNP-GFILTGCYDNLGRVWKAGGV----CTHILEG--HCGAVSSVNIIKSDGLKYVTVATASKDQTL 92 (347)
Q Consensus 20 ~~~h~~~v~~~~~~~~-~~l~sg~~d~~i~iw~~~~~----~~~~l~~--h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v 92 (347)
...|..-|.++.+++. ..+.|||. |-|+|||+.+. .+..|.. ...-+.++..++++ ..|++|++-.++
T Consensus 415 tL~HGEvVcAvtIS~~trhVyTgGk-gcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdg----rtLivGGeastl 489 (705)
T KOG0639|consen 415 TLAHGEVVCAVTISNPTRHVYTGGK-GCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDG----RTLIVGGEASTL 489 (705)
T ss_pred hhccCcEEEEEEecCCcceeEecCC-CeEEEeeccCCCCCCccccccccCcccceeeeEecCCC----ceEEecccccee
Confidence 3469999999998864 57888875 67999998532 2333332 23456777888844 468999999999
Q ss_pred EEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccc
Q 036314 93 RLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEP 172 (347)
Q Consensus 93 ~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (347)
.|||+...+. +....+......+.+++.+||.++++++..||.|+|||+.+.
T Consensus 490 siWDLAapTp-------rikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq--------------------- 541 (705)
T KOG0639|consen 490 SIWDLAAPTP-------RIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQ--------------------- 541 (705)
T ss_pred eeeeccCCCc-------chhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccc---------------------
Confidence 9999976542 122233334455778899999999999999999999999863
Q ss_pred cccccccccccCCccceEEEEeC-CCCeEEEEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcE
Q 036314 173 QLEGEAISTLVGHTQCVSSVVWP-QQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPIL 251 (347)
Q Consensus 173 ~~~~~~~~~~~~h~~~v~~~~~~-~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i 251 (347)
..++.+.||++.+.|+..+ +|..|-+|+.|++||.||+++++.+..-.+...+..+-.+|. +..+|.|.+++.+
T Consensus 542 ----~~VrqfqGhtDGascIdis~dGtklWTGGlDntvRcWDlregrqlqqhdF~SQIfSLg~cP~-~dWlavGMens~v 616 (705)
T KOG0639|consen 542 ----TLVRQFQGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLREGRQLQQHDFSSQIFSLGYCPT-GDWLAVGMENSNV 616 (705)
T ss_pred ----eeeecccCCCCCceeEEecCCCceeecCCCccceeehhhhhhhhhhhhhhhhhheecccCCC-ccceeeecccCcE
Confidence 3577899999999999874 778899999999999999999887765555566777777665 4588999999999
Q ss_pred EEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeec-CCCEEE
Q 036314 252 RIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWW-RGDSVI 330 (347)
Q Consensus 252 ~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~-~~~~l~ 330 (347)
.+.....+. .+.+.-|.+-|.++.|.+-|. .+++.+.|.-+..|..-.|..+..... ...|+|++.+ ++++++
T Consensus 617 evlh~skp~----kyqlhlheScVLSlKFa~cGk-wfvStGkDnlLnawrtPyGasiFqskE-~SsVlsCDIS~ddkyIV 690 (705)
T KOG0639|consen 617 EVLHTSKPE----KYQLHLHESCVLSLKFAYCGK-WFVSTGKDNLLNAWRTPYGASIFQSKE-SSSVLSCDISFDDKYIV 690 (705)
T ss_pred EEEecCCcc----ceeecccccEEEEEEecccCc-eeeecCchhhhhhccCccccceeeccc-cCcceeeeeccCceEEE
Confidence 999876532 456778999999999999996 599999999999998887877766543 5789999997 677899
Q ss_pred EccCCceEEEeec
Q 036314 331 SGGVDSKLCVSSG 343 (347)
Q Consensus 331 s~s~D~~v~vw~~ 343 (347)
|||.|+.-.||..
T Consensus 691 TGSGdkkATVYeV 703 (705)
T KOG0639|consen 691 TGSGDKKATVYEV 703 (705)
T ss_pred ecCCCcceEEEEE
Confidence 9999998888764
No 104
>KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.94 E-value=1.9e-25 Score=192.01 Aligned_cols=251 Identities=23% Similarity=0.381 Sum_probs=193.6
Q ss_pred EEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccC--cc------ccceeeee-eccccceEEEEEe
Q 036314 58 HILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNH--PK------KIRSFKIL-RGHKASVHSIAAE 128 (347)
Q Consensus 58 ~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~--~~------~~~~~~~~-~~h~~~V~~v~~s 128 (347)
.....|.-++.++++++++ .++++++.|++|.-|++.+++-... +. ...+.+.- .+|...+.+++.+
T Consensus 136 ~~~~~H~~s~~~vals~d~----~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS 211 (479)
T KOG0299|consen 136 RVIGKHQLSVTSVALSPDD----KRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVS 211 (479)
T ss_pred eeeccccCcceEEEeeccc----cceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEc
Confidence 4566899999999999854 3689999999999999987753211 00 11122222 3899999999999
Q ss_pred CCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeCCC-CeEEEEecCC
Q 036314 129 TSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQ-ETIYSASWDH 207 (347)
Q Consensus 129 ~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~l~s~s~dg 207 (347)
+||++|++|+.|..|.||+..+. +.++.+.+|.+.|.+++|..+ ..+++++.|+
T Consensus 212 ~Dgkylatgg~d~~v~Iw~~~t~-------------------------ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Dr 266 (479)
T KOG0299|consen 212 SDGKYLATGGRDRHVQIWDCDTL-------------------------EHVKVFKGHRGAVSSLAFRKGTSELYSASADR 266 (479)
T ss_pred CCCcEEEecCCCceEEEecCccc-------------------------chhhcccccccceeeeeeecCccceeeeecCC
Confidence 99999999999999999998764 346678999999999999654 4699999999
Q ss_pred cEEEEECCCCceeeeeeeC-eeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCe
Q 036314 208 SVRTWDVEMGKDLSDIFCG-KALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWF 286 (347)
Q Consensus 208 ~v~vwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~ 286 (347)
++++|++.....+.+++.+ ..+..++... -...+.+|+.|.++++|++.. . ....+.+|.+.+.|++|-.+.
T Consensus 267 svkvw~~~~~s~vetlyGHqd~v~~IdaL~-reR~vtVGgrDrT~rlwKi~e--e--sqlifrg~~~sidcv~~In~~-- 339 (479)
T KOG0299|consen 267 SVKVWSIDQLSYVETLYGHQDGVLGIDALS-RERCVTVGGRDRTVRLWKIPE--E--SQLIFRGGEGSIDCVAFINDE-- 339 (479)
T ss_pred ceEEEehhHhHHHHHHhCCccceeeechhc-ccceEEeccccceeEEEeccc--c--ceeeeeCCCCCeeeEEEeccc--
Confidence 9999999877766666543 3566666533 344666777999999999843 2 234567899899999998765
Q ss_pred EEEEEeCCCcEEEEEcCCCccceeec-CCC---C--------eEEEEeecCC-CEEEEccCCceEEEeecc
Q 036314 287 HLISASYDGKVMLWDLRTAWPLSVID-SHK---D--------KVLCADWWRG-DSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 287 ~l~s~s~D~~i~lwd~~~~~~~~~~~-~h~---~--------~v~~~~~~~~-~~l~s~s~D~~v~vw~~~ 344 (347)
++++||.||.|.||++-+.+++.+.. +|. + -|.+++-.++ +.+||||.+|.|++|...
T Consensus 340 HfvsGSdnG~IaLWs~~KKkplf~~~~AHgv~~~~~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~ 410 (479)
T KOG0299|consen 340 HFVSGSDNGSIALWSLLKKKPLFTSRLAHGVIPELDPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIE 410 (479)
T ss_pred ceeeccCCceEEEeeecccCceeEeeccccccCCccccccccceeeeEecccCceEEecCCCCceEEEEec
Confidence 69999999999999999888877642 332 1 3556666554 579999999999999764
No 105
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=99.94 E-value=1.8e-24 Score=178.21 Aligned_cols=246 Identities=19% Similarity=0.242 Sum_probs=189.3
Q ss_pred EEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEe
Q 036314 58 HILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSG 137 (347)
Q Consensus 58 ~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sg 137 (347)
+.|..-.+.|+++.|+.++ ..|+++++|.++++||...++ ..+++..++-.|..+.|-.....++.+
T Consensus 8 k~f~~~~~~i~sl~fs~~G----~~litss~dDsl~LYd~~~g~---------~~~ti~skkyG~~~~~Fth~~~~~i~s 74 (311)
T KOG1446|consen 8 KVFRETNGKINSLDFSDDG----LLLITSSEDDSLRLYDSLSGK---------QVKTINSKKYGVDLACFTHHSNTVIHS 74 (311)
T ss_pred cccccCCCceeEEEecCCC----CEEEEecCCCeEEEEEcCCCc---------eeeEeecccccccEEEEecCCceEEEc
Confidence 3455667889999999844 468889999999999998765 345677777888889997766666666
Q ss_pred eC--CCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEEC
Q 036314 138 SW--DCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDV 214 (347)
Q Consensus 138 s~--Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~ 214 (347)
+. |.+||.-++.+. +.++.+.||.+.|.++.. |-++.++|++.|++|++||+
T Consensus 75 Stk~d~tIryLsl~dN-------------------------kylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDl 129 (311)
T KOG1446|consen 75 STKEDDTIRYLSLHDN-------------------------KYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDL 129 (311)
T ss_pred cCCCCCceEEEEeecC-------------------------ceEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEe
Confidence 65 899999988753 568899999999999986 56788999999999999999
Q ss_pred CCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCC-CCCeEEec-CCCCCeeEEEeCCCCCeEEEEEe
Q 036314 215 EMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGT-SAPVFQFS-SHNSWISACKWHNKSWFHLISAS 292 (347)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~-~~~~~~~~-~h~~~v~~v~~s~~~~~~l~s~s 292 (347)
+..++...+.... ....++.| .+.++|++...+.|++||+|.-+. +...+.+. +.......+.|+|+|.++|+ +.
T Consensus 130 R~~~cqg~l~~~~-~pi~AfDp-~GLifA~~~~~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLl-sT 206 (311)
T KOG1446|consen 130 RVKKCQGLLNLSG-RPIAAFDP-EGLIFALANGSELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILL-ST 206 (311)
T ss_pred cCCCCceEEecCC-CcceeECC-CCcEEEEecCCCeEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEE-Ee
Confidence 9877765554322 23456654 456888887777999999987432 22223332 34566789999999987555 56
Q ss_pred CCCcEEEEEcCCCccceeecCCCCeE---EEEeecC-CCEEEEccCCceEEEeecc
Q 036314 293 YDGKVMLWDLRTAWPLSVIDSHKDKV---LCADWWR-GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 293 ~D~~i~lwd~~~~~~~~~~~~h~~~v---~~~~~~~-~~~l~s~s~D~~v~vw~~~ 344 (347)
..+.+.+.|.=+|....++++|.+.- ....|.| ++.+.+|+.||+|.+|...
T Consensus 207 ~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftPds~Fvl~gs~dg~i~vw~~~ 262 (311)
T KOG1446|consen 207 NASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFTPDSKFVLSGSDDGTIHVWNLE 262 (311)
T ss_pred CCCcEEEEEccCCcEeeeEeeccCCCCcceeEEECCCCcEEEEecCCCcEEEEEcC
Confidence 67889999999999888888776543 5677865 6779999999999999864
No 106
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=99.94 E-value=4.3e-25 Score=188.55 Aligned_cols=235 Identities=23% Similarity=0.350 Sum_probs=192.6
Q ss_pred CceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEE
Q 036314 65 GAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTIS 144 (347)
Q Consensus 65 ~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~ 144 (347)
..+.++...+..+ .++||+.|.++-++|.+.++ .+.++.||...|+++.|+++...+++++.|..|+
T Consensus 220 pgi~ald~~~s~~----~ilTGG~d~~av~~d~~s~q---------~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~ 286 (506)
T KOG0289|consen 220 PGITALDIIPSSS----KILTGGEDKTAVLFDKPSNQ---------ILATLKGHTKKITSVKFHKDLDTVITASADEIIR 286 (506)
T ss_pred CCeeEEeecCCCC----cceecCCCCceEEEecchhh---------hhhhccCcceEEEEEEeccchhheeecCCcceEE
Confidence 3467777776422 58999999999999988765 4567899999999999999999999999999999
Q ss_pred EEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeee
Q 036314 145 LWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDI 223 (347)
Q Consensus 145 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~ 223 (347)
||...... .......|..+|..+.. +.+++|++++.|++....|++++..+...
T Consensus 287 vws~~~~s-------------------------~~~~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~v 341 (506)
T KOG0289|consen 287 VWSVPLSS-------------------------EPTSSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVV 341 (506)
T ss_pred eecccccc-------------------------CccccccccccceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEE
Confidence 99876432 22345668899998875 78999999999999999999999887766
Q ss_pred eeC---eeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEE
Q 036314 224 FCG---KALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLW 300 (347)
Q Consensus 224 ~~~---~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lw 300 (347)
... -.+.+.+|+|+ +.+|.+|..|+.++|||+..+. ....|.+|.+.|.+++|+.+| |+||+++.|+.|++|
T Consensus 342 s~~~s~v~~ts~~fHpD-gLifgtgt~d~~vkiwdlks~~---~~a~Fpght~~vk~i~FsENG-Y~Lat~add~~V~lw 416 (506)
T KOG0289|consen 342 SDETSDVEYTSAAFHPD-GLIFGTGTPDGVVKIWDLKSQT---NVAKFPGHTGPVKAISFSENG-YWLATAADDGSVKLW 416 (506)
T ss_pred eeccccceeEEeeEcCC-ceEEeccCCCceEEEEEcCCcc---ccccCCCCCCceeEEEeccCc-eEEEEEecCCeEEEE
Confidence 553 24678899765 6789999999999999998643 467899999999999999877 679999999999999
Q ss_pred EcCCCccceeecCC-CCeEEEEeec-CCCEEEEccCCceEEEee
Q 036314 301 DLRTAWPLSVIDSH-KDKVLCADWW-RGDSVISGGVDSKLCVSS 342 (347)
Q Consensus 301 d~~~~~~~~~~~~h-~~~v~~~~~~-~~~~l~s~s~D~~v~vw~ 342 (347)
|+|+-+..+++.-. ...|.++.|- .|++|+.+|.|=.|.++.
T Consensus 417 DLRKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~~g~~l~Vy~~~ 460 (506)
T KOG0289|consen 417 DLRKLKNFKTIQLDEKKEVNSLSFDQSGTYLGIAGSDLQVYICK 460 (506)
T ss_pred EehhhcccceeeccccccceeEEEcCCCCeEEeecceeEEEEEe
Confidence 99998777776432 2358888885 488999998776666554
No 107
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=99.94 E-value=8.6e-27 Score=192.39 Aligned_cols=248 Identities=23% Similarity=0.340 Sum_probs=198.3
Q ss_pred eccCCCCcCCCCCcCCceeeccCCC-CCEEEEEecCCeEEEEcC-CCeEEEEee-ccCCceEEEEEeecCCCceEEEEEc
Q 036314 10 KAVAPQKEEEPSLHDDWVSAVDGSN-PGFILTGCYDNLGRVWKA-GGVCTHILE-GHCGAVSSVNIIKSDGLKYVTVATA 86 (347)
Q Consensus 10 ~~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~sg~~d~~i~iw~~-~~~~~~~l~-~h~~~V~~v~~~~~~~~~~~~l~s~ 86 (347)
|++.||.....+.|+++|.|++|+. ...||||+.||.|++|.+ .|.|++.|. .|+..|.++.|+.++. .++++
T Consensus 249 KDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~tG~ClRrFdrAHtkGvt~l~FSrD~S----qiLS~ 324 (508)
T KOG0275|consen 249 KDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWRIETGQCLRRFDRAHTKGVTCLSFSRDNS----QILSA 324 (508)
T ss_pred hhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEEEEecchHHHHhhhhhccCeeEEEEccCcc----hhhcc
Confidence 6788999999999999999999994 569999999999999996 589988887 8999999999998554 58999
Q ss_pred cCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCC
Q 036314 87 SKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGN 166 (347)
Q Consensus 87 s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~ 166 (347)
|.|.++|+..+.++++ ++.++||+.-|+.+.|.+||..++++|.||+|++|+..+.++
T Consensus 325 sfD~tvRiHGlKSGK~---------LKEfrGHsSyvn~a~ft~dG~~iisaSsDgtvkvW~~KtteC------------- 382 (508)
T KOG0275|consen 325 SFDQTVRIHGLKSGKC---------LKEFRGHSSYVNEATFTDDGHHIISASSDGTVKVWHGKTTEC------------- 382 (508)
T ss_pred cccceEEEeccccchh---------HHHhcCccccccceEEcCCCCeEEEecCCccEEEecCcchhh-------------
Confidence 9999999999988864 556899999999999999999999999999999999876543
Q ss_pred Ccccccccccccccccc--CCccceEEEE-eC-CCCeEEEEecCCcEEEEECCCCceeeeeeeCe----eeEEEEeeCCC
Q 036314 167 NQVEEPQLEGEAISTLV--GHTQCVSSVV-WP-QQETIYSASWDHSVRTWDVEMGKDLSDIFCGK----ALNCIDIGGEG 238 (347)
Q Consensus 167 ~~~~~~~~~~~~~~~~~--~h~~~v~~~~-~~-~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~----~~~~~~~~~~~ 238 (347)
+.+++ +..-+|+++. +| +.+.++.+...+++.+-++. |+.++.+..++ ...+..++| .
T Consensus 383 ------------~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~q-GQvVrsfsSGkREgGdFi~~~lSp-k 448 (508)
T KOG0275|consen 383 ------------LSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQ-GQVVRSFSSGKREGGDFINAILSP-K 448 (508)
T ss_pred ------------hhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEecc-ceEEeeeccCCccCCceEEEEecC-C
Confidence 22332 2234566665 45 34567778888899988864 56666665432 233444544 4
Q ss_pred CcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEE
Q 036314 239 SALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWD 301 (347)
Q Consensus 239 ~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd 301 (347)
+..+...++|+.++-|....++ ...++.-|..-|-.+.-+|.. .+||+=++||.+++|.
T Consensus 449 GewiYcigED~vlYCF~~~sG~---LE~tl~VhEkdvIGl~HHPHq-NllAsYsEDgllKLWk 507 (508)
T KOG0275|consen 449 GEWIYCIGEDGVLYCFSVLSGK---LERTLPVHEKDVIGLTHHPHQ-NLLASYSEDGLLKLWK 507 (508)
T ss_pred CcEEEEEccCcEEEEEEeecCc---eeeeeecccccccccccCccc-chhhhhcccchhhhcC
Confidence 5677788899999999876532 346777898888888888876 4799999999999994
No 108
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=99.94 E-value=3.1e-25 Score=178.59 Aligned_cols=207 Identities=23% Similarity=0.396 Sum_probs=174.3
Q ss_pred eeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEE
Q 036314 114 ILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVV 193 (347)
Q Consensus 114 ~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 193 (347)
.+.||+.+++.+.|+.+|.+|+|++.|.++.+|-..+ ++.+.++.||+++|+++.
T Consensus 5 ~l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~n-------------------------GerlGty~GHtGavW~~D 59 (327)
T KOG0643|consen 5 LLQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLN-------------------------GERLGTYDGHTGAVWCCD 59 (327)
T ss_pred ccccCccccceEEecCCCcEEEEecCCCCceEEEecC-------------------------CceeeeecCCCceEEEEE
Confidence 3679999999999999999999999999999996543 456789999999999998
Q ss_pred eC-CCCeEEEEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEe----cCCCcEEEEeCCCCC----CCCC
Q 036314 194 WP-QQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAG----GSDPILRIWDPRKPG----TSAP 264 (347)
Q Consensus 194 ~~-~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~----~~d~~i~iwd~~~~~----~~~~ 264 (347)
.. +...+++|+.|.++++||+++|+++..+..+.++..+.|+..+...+++. +..+.|.++|++... ...|
T Consensus 60 id~~s~~liTGSAD~t~kLWDv~tGk~la~~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep 139 (327)
T KOG0643|consen 60 IDWDSKHLITGSADQTAKLWDVETGKQLATWKTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEP 139 (327)
T ss_pred ecCCcceeeeccccceeEEEEcCCCcEEEEeecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCc
Confidence 74 56789999999999999999999999999899999999976654444332 345889999998432 2345
Q ss_pred eEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCcc-ceeecCCCCeEEEEeecC-CCEEEEccCCceEEEee
Q 036314 265 VFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWP-LSVIDSHKDKVLCADWWR-GDSVISGGVDSKLCVSS 342 (347)
Q Consensus 265 ~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~-~~~~~~h~~~v~~~~~~~-~~~l~s~s~D~~v~vw~ 342 (347)
...+.-+.+.++...|.|-+. .|++|..||.|.+||+++|+. +..-+.|...|..+.+++ ..+++++|.|.+-++|+
T Consensus 140 ~~kI~t~~skit~a~Wg~l~~-~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D 218 (327)
T KOG0643|consen 140 YLKIPTPDSKITSALWGPLGE-TIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVD 218 (327)
T ss_pred eEEecCCccceeeeeecccCC-EEEEecCCCcEEEEEcccCceeeechhhhccccccccccCCcceEEecccCccceeee
Confidence 667777888999999999986 499999999999999999855 455578999999999985 56899999999999998
Q ss_pred cccC
Q 036314 343 GVSI 346 (347)
Q Consensus 343 ~~~~ 346 (347)
--+.
T Consensus 219 ~~tl 222 (327)
T KOG0643|consen 219 VRTL 222 (327)
T ss_pred ccce
Confidence 7643
No 109
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.94 E-value=1.3e-26 Score=193.63 Aligned_cols=242 Identities=19% Similarity=0.361 Sum_probs=184.1
Q ss_pred eEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEE
Q 036314 55 VCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMV 134 (347)
Q Consensus 55 ~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l 134 (347)
..+..|.||.+.|.+++=+|.. ...++||+.||.|++||+...+ ++.+|.+|.+.|..+++.. ..+
T Consensus 57 PFv~~L~gHrdGV~~lakhp~~---ls~~aSGs~DG~VkiWnlsqR~---------~~~~f~AH~G~V~Gi~v~~--~~~ 122 (433)
T KOG0268|consen 57 PFVGSLDGHRDGVSCLAKHPNK---LSTVASGSCDGEVKIWNLSQRE---------CIRTFKAHEGLVRGICVTQ--TSF 122 (433)
T ss_pred cchhhccccccccchhhcCcch---hhhhhccccCceEEEEehhhhh---------hhheeecccCceeeEEecc--cce
Confidence 3456788999999999988743 2358999999999999997643 5568899999999999876 678
Q ss_pred EEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeC-CCCeEEEEecCCcEEEEE
Q 036314 135 CSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP-QQETIYSASWDHSVRTWD 213 (347)
Q Consensus 135 ~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~l~s~s~dg~v~vwd 213 (347)
++++.|.+|+.|.++.+. +.++.+. ..+..+... .+..++|++. .|.|||
T Consensus 123 ~tvgdDKtvK~wk~~~~p--------------------------~~tilg~-s~~~gIdh~~~~~~FaTcGe--~i~IWD 173 (433)
T KOG0268|consen 123 FTVGDDKTVKQWKIDGPP--------------------------LHTILGK-SVYLGIDHHRKNSVFATCGE--QIDIWD 173 (433)
T ss_pred EEecCCcceeeeeccCCc--------------------------ceeeecc-ccccccccccccccccccCc--eeeecc
Confidence 999999999999876421 1111111 112222221 2345666654 499999
Q ss_pred CCCCceeeeeeeCe-eeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEe
Q 036314 214 VEMGKDLSDIFCGK-ALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISAS 292 (347)
Q Consensus 214 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s 292 (347)
.+...++..+..+. .+.++.+.|....+|++++.|+.|.|||++..... ....+. -.-+.++|+|.. .-+++|+
T Consensus 174 ~~R~~Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl-~KVi~~---mRTN~IswnPea-fnF~~a~ 248 (433)
T KOG0268|consen 174 EQRDNPVSSMSWGADSISSVKFNPVETSILASCASDRSIVLYDLRQASPL-KKVILT---MRTNTICWNPEA-FNFVAAN 248 (433)
T ss_pred cccCCccceeecCCCceeEEecCCCcchheeeeccCCceEEEecccCCcc-ceeeee---ccccceecCccc-cceeecc
Confidence 98888888777654 47888998888889999999999999999864322 112222 233568999965 5699999
Q ss_pred CCCcEEEEEcCCC-ccceeecCCCCeEEEEeecC-CCEEEEccCCceEEEeecc
Q 036314 293 YDGKVMLWDLRTA-WPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 293 ~D~~i~lwd~~~~-~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~D~~v~vw~~~ 344 (347)
+|..+..+|++.- .++.++.+|.++|+.|+|+| |+-++|||.|.+|+|+-..
T Consensus 249 ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~~ 302 (433)
T KOG0268|consen 249 EDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVN 302 (433)
T ss_pred ccccceehhhhhhcccchhhcccceeEEEeccCCCcchhccccccceEEEeecC
Confidence 9999999999974 67888999999999999997 7779999999999998653
No 110
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=99.94 E-value=4.6e-24 Score=168.11 Aligned_cols=255 Identities=22% Similarity=0.285 Sum_probs=181.7
Q ss_pred EEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccc-------cCccccceeeeeeccccceEEEEEe
Q 036314 56 CTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELV-------NHPKKIRSFKILRGHKASVHSIAAE 128 (347)
Q Consensus 56 ~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~-------~~~~~~~~~~~~~~h~~~V~~v~~s 128 (347)
++.+|.. +..|.+++|+|.++ ..+.||+..+.|+--...-.-+ .+|. ....+.-+.|.+.|.|++|+
T Consensus 25 ~i~~l~d-sqairav~fhp~g~----lyavgsnskt~ric~yp~l~~~r~~hea~~~pp-~v~~kr~khhkgsiyc~~ws 98 (350)
T KOG0641|consen 25 AINILED-SQAIRAVAFHPAGG----LYAVGSNSKTFRICAYPALIDLRHAHEAAKQPP-SVLCKRNKHHKGSIYCTAWS 98 (350)
T ss_pred EEEEecc-hhheeeEEecCCCc----eEEeccCCceEEEEccccccCcccccccccCCC-eEEeeeccccCccEEEEEec
Confidence 3344443 35589999999665 5788999999999865422111 1111 12223446789999999999
Q ss_pred CCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeC-----CCCeEEEE
Q 036314 129 TSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP-----QQETIYSA 203 (347)
Q Consensus 129 ~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-----~~~~l~s~ 203 (347)
|+|.++++||.|.+|++...+...+. ..+. -..+.-|.+.|+.++|- .+..|+++
T Consensus 99 ~~geliatgsndk~ik~l~fn~dt~~-------------------~~g~-dle~nmhdgtirdl~fld~~~s~~~il~s~ 158 (350)
T KOG0641|consen 99 PCGELIATGSNDKTIKVLPFNADTCN-------------------ATGH-DLEFNMHDGTIRDLAFLDDPESGGAILASA 158 (350)
T ss_pred CccCeEEecCCCceEEEEeccccccc-------------------ccCc-ceeeeecCCceeeeEEecCCCcCceEEEec
Confidence 99999999999999999765432111 0111 11345588899999982 23345654
Q ss_pred e-cCCcEEEEECCCCceeeeeeeC--eeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEec--CC-----CC
Q 036314 204 S-WDHSVRTWDVEMGKDLSDIFCG--KALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFS--SH-----NS 273 (347)
Q Consensus 204 s-~dg~v~vwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~--~h-----~~ 273 (347)
+ .|..|.+=|...++....+..+ +...-..| ++.++++|++|.+|++||++-+. .+.++. -| .+
T Consensus 159 gagdc~iy~tdc~~g~~~~a~sghtghilalysw---n~~m~~sgsqdktirfwdlrv~~---~v~~l~~~~~~~gless 232 (350)
T KOG0641|consen 159 GAGDCKIYITDCGRGQGFHALSGHTGHILALYSW---NGAMFASGSQDKTIRFWDLRVNS---CVNTLDNDFHDGGLESS 232 (350)
T ss_pred CCCcceEEEeecCCCCcceeecCCcccEEEEEEe---cCcEEEccCCCceEEEEeeeccc---eeeeccCcccCCCcccc
Confidence 3 3455555577777766665532 23333344 34689999999999999998532 222221 11 25
Q ss_pred CeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeecCCC-EEEEccCCceEEEeec
Q 036314 274 WISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGD-SVISGGVDSKLCVSSG 343 (347)
Q Consensus 274 ~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~D~~v~vw~~ 343 (347)
.|.+++..|.|+ +|++|-.|..+.+||++.+.+++.+-.|...|+||.|+||. +|.++|.|..|++-+.
T Consensus 233 avaav~vdpsgr-ll~sg~~dssc~lydirg~r~iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdl 302 (350)
T KOG0641|consen 233 AVAAVAVDPSGR-LLASGHADSSCMLYDIRGGRMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDL 302 (350)
T ss_pred eeEEEEECCCcc-eeeeccCCCceEEEEeeCCceeeeeCCCccceeEEEeCCCceEEEEecccceEEEeec
Confidence 689999999984 79999999999999999999999999999999999999987 6999999999998763
No 111
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=99.94 E-value=6.2e-26 Score=186.24 Aligned_cols=221 Identities=22% Similarity=0.313 Sum_probs=169.1
Q ss_pred eeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEE
Q 036314 114 ILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVV 193 (347)
Q Consensus 114 ~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 193 (347)
.+..|+.++++.+|++||.++++||.|..|+|.|++..-....+. .......+..-..++++-.|.+.|+.+.
T Consensus 107 ylt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~-------em~~~~~qa~hPvIRTlYDH~devn~l~ 179 (430)
T KOG0640|consen 107 YLTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPK-------EMISGDTQARHPVIRTLYDHVDEVNDLD 179 (430)
T ss_pred EEeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchh-------hhccCCcccCCceEeehhhccCccccee
Confidence 467899999999999999999999999999999987542211100 0111112222245788999999999999
Q ss_pred e-CCCCeEEEEecCCcEEEEECCCCce---eeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEec
Q 036314 194 W-PQQETIYSASWDHSVRTWDVEMGKD---LSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFS 269 (347)
Q Consensus 194 ~-~~~~~l~s~s~dg~v~vwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~ 269 (347)
| |....|+|++.|++|+++|...... .+.++...++.++.|+|.+ .++++|.+-.++++||+.....-.+...-.
T Consensus 180 FHPre~ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsG-efllvgTdHp~~rlYdv~T~QcfvsanPd~ 258 (430)
T KOG0640|consen 180 FHPRETILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSG-EFLLVGTDHPTLRLYDVNTYQCFVSANPDD 258 (430)
T ss_pred ecchhheEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCC-ceEEEecCCCceeEEeccceeEeeecCccc
Confidence 8 5567799999999999999865432 2334556789999998754 588889999999999986321100011124
Q ss_pred CCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceee-cCCCC-eEEEEeec-CCCEEEEccCCceEEEeec
Q 036314 270 SHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVI-DSHKD-KVLCADWW-RGDSVISGGVDSKLCVSSG 343 (347)
Q Consensus 270 ~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~-~~h~~-~v~~~~~~-~~~~l~s~s~D~~v~vw~~ 343 (347)
+|.+.|.++.+++.+. +-++||.||.|||||=-.++++.++ .+|.+ .|-+..|. +|+++.|.|+|.+|++|-.
T Consensus 259 qht~ai~~V~Ys~t~~-lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi 334 (430)
T KOG0640|consen 259 QHTGAITQVRYSSTGS-LYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEI 334 (430)
T ss_pred ccccceeEEEecCCcc-EEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcceeeeeee
Confidence 6899999999999985 6899999999999998888888887 46754 56778896 7889999999999999964
No 112
>KOG0269 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.94 E-value=1.6e-25 Score=203.27 Aligned_cols=265 Identities=20% Similarity=0.379 Sum_probs=195.1
Q ss_pred EEEEEecCCeEEEEcCC-----CeEEEEeeccCCc---eEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccc
Q 036314 37 FILTGCYDNLGRVWKAG-----GVCTHILEGHCGA---VSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKK 108 (347)
Q Consensus 37 ~l~sg~~d~~i~iw~~~-----~~~~~~l~~h~~~---V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~ 108 (347)
.|+-+|. ...+++... -.|...+.+-... ...|+|.. .....|||++..|.|-+||+... ..
T Consensus 53 qiv~AGr-s~lklyai~~~~~~~~~~~~~k~kqn~~~S~~DVkW~~---~~~NlIAT~s~nG~i~vWdlnk~------~r 122 (839)
T KOG0269|consen 53 QIVVAGR-SLLKLYAINPNDFSEKCNHRFKTKQNKFYSAADVKWGQ---LYSNLIATCSTNGVISVWDLNKS------IR 122 (839)
T ss_pred eeEEecc-cceeeEeeCcccCCcceeeecccccceeeehhhccccc---chhhhheeecCCCcEEEEecCcc------cc
Confidence 4554443 356677542 1333333333322 23455653 23357999999999999999751 11
Q ss_pred cceeeeeeccccceEEEEEeCCC-CEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCcc
Q 036314 109 IRSFKILRGHKASVHSIAAETSG-NMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQ 187 (347)
Q Consensus 109 ~~~~~~~~~h~~~V~~v~~s~~~-~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 187 (347)
.+.+..|..|+..++++.|++.. .+|+|||.||+||+||++.... ..++.+...
T Consensus 123 nk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S-------------------------~~t~~~nSE 177 (839)
T KOG0269|consen 123 NKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKS-------------------------KSTFRSNSE 177 (839)
T ss_pred chhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccc-------------------------cccccccch
Confidence 12344678899999999998875 6889999999999999986432 234555667
Q ss_pred ceEEEEeC--CCCeEEEEecCCcEEEEECCCCcee-eeee-eCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCC
Q 036314 188 CVSSVVWP--QQETIYSASWDHSVRTWDVEMGKDL-SDIF-CGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSA 263 (347)
Q Consensus 188 ~v~~~~~~--~~~~l~s~s~dg~v~vwd~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~ 263 (347)
.|+.+.|. .+.+++++...|.+++||++..... ..+. +..++.|+.++| ++.+||+||.|+.|+|||..... ..
T Consensus 178 SiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhP-nr~~lATGGRDK~vkiWd~t~~~-~~ 255 (839)
T KOG0269|consen 178 SIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHP-NREWLATGGRDKMVKIWDMTDSR-AK 255 (839)
T ss_pred hhhceeeccCCCceEEEecCCceEEEeeccCchhHHHHhhcccCceEEEeecC-CCceeeecCCCccEEEEeccCCC-cc
Confidence 88999984 4668999999999999999976543 3332 345889999988 67799999999999999987532 33
Q ss_pred CeEEecCCCCCeeEEEeCCCCCeEEEEEe--CCCcEEEEEcCCCc-cceeecCCCCeEEEEeecCC--CEEEEccCCceE
Q 036314 264 PVFQFSSHNSWISACKWHNKSWFHLISAS--YDGKVMLWDLRTAW-PLSVIDSHKDKVLCADWWRG--DSVISGGVDSKL 338 (347)
Q Consensus 264 ~~~~~~~h~~~v~~v~~s~~~~~~l~s~s--~D~~i~lwd~~~~~-~~~~~~~h~~~v~~~~~~~~--~~l~s~s~D~~v 338 (347)
++.++. ....|.+|+|-|...++||+++ .|..|+|||++..- |-.++..|.+.|..+.|..+ ..|.++|.|++|
T Consensus 256 ~~~tIn-Tiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRPYIP~~t~~eH~~~vt~i~W~~~d~~~l~s~sKD~tv 334 (839)
T KOG0269|consen 256 PKHTIN-TIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRPYIPYATFLEHTDSVTGIAWDSGDRINLWSCSKDGTV 334 (839)
T ss_pred ceeEEe-ecceeeeeeeccCccchhhhhhccccceEEEEeeccccccceeeeccCccccceeccCCCceeeEeecCccHH
Confidence 444442 4457999999999999999998 48899999999874 45678999999999999533 358999999987
Q ss_pred E
Q 036314 339 C 339 (347)
Q Consensus 339 ~ 339 (347)
.
T Consensus 335 ~ 335 (839)
T KOG0269|consen 335 L 335 (839)
T ss_pred H
Confidence 4
No 113
>KOG0269 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.94 E-value=6.9e-26 Score=205.64 Aligned_cols=234 Identities=20% Similarity=0.357 Sum_probs=193.6
Q ss_pred CCCEEEEEecCCeEEEEcCC----CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCcccc
Q 036314 34 NPGFILTGCYDNLGRVWKAG----GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKI 109 (347)
Q Consensus 34 ~~~~l~sg~~d~~i~iw~~~----~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~ 109 (347)
..++|||++..|.|-+||+. .+.+..|..|+..++++.|++... ..|+|||.||+||+||+...+
T Consensus 99 ~~NlIAT~s~nG~i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~tep---~iliSGSQDg~vK~~DlR~~~-------- 167 (839)
T KOG0269|consen 99 YSNLIATCSTNGVISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTEP---NILISGSQDGTVKCWDLRSKK-------- 167 (839)
T ss_pred hhhhheeecCCCcEEEEecCccccchhhhHhhhhccceeeeeeccCCc---cEEEecCCCceEEEEeeeccc--------
Confidence 46799999999999999974 345567999999999999987543 489999999999999997543
Q ss_pred ceeeeeeccccceEEEEEeCC-CCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccc
Q 036314 110 RSFKILRGHKASVHSIAAETS-GNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQC 188 (347)
Q Consensus 110 ~~~~~~~~h~~~V~~v~~s~~-~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 188 (347)
...++.+....|+.|.|+|- +..|+++...|.+++||++.+. .+...+..|+++
T Consensus 168 -S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~------------------------r~~~k~~AH~Gp 222 (839)
T KOG0269|consen 168 -SKSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPD------------------------RCEKKLTAHNGP 222 (839)
T ss_pred -ccccccccchhhhceeeccCCCceEEEecCCceEEEeeccCch------------------------hHHHHhhcccCc
Confidence 33456778888999999884 6899999999999999998642 345677889999
Q ss_pred eEEEEe-CCCCeEEEEecCCcEEEEECCCCc--eeeeeeeCeeeEEEEeeCCCCcEEEEec--CCCcEEEEeCCCCCCCC
Q 036314 189 VSSVVW-PQQETIYSASWDHSVRTWDVEMGK--DLSDIFCGKALNCIDIGGEGSALIAAGG--SDPILRIWDPRKPGTSA 263 (347)
Q Consensus 189 v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~la~~~--~d~~i~iwd~~~~~~~~ 263 (347)
|.++-| |++.+||+||.|++|+|||..+++ ....+....++.++.|-|....+||+++ .|-.|++||++.+ ..
T Consensus 223 V~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~~~~~tInTiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRP--YI 300 (839)
T KOG0269|consen 223 VLCLNWHPNREWLATGGRDKMVKIWDMTDSRAKPKHTINTIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRP--YI 300 (839)
T ss_pred eEEEeecCCCceeeecCCCccEEEEeccCCCccceeEEeecceeeeeeeccCccchhhhhhccccceEEEEeeccc--cc
Confidence 999998 677789999999999999987553 3455666778999999988888888874 5889999999964 45
Q ss_pred CeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCC
Q 036314 264 PVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTA 305 (347)
Q Consensus 264 ~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~ 305 (347)
|..++..|.+-+..++|.......|.+++.|++|..--++.+
T Consensus 301 P~~t~~eH~~~vt~i~W~~~d~~~l~s~sKD~tv~qh~~kna 342 (839)
T KOG0269|consen 301 PYATFLEHTDSVTGIAWDSGDRINLWSCSKDGTVLQHLFKNA 342 (839)
T ss_pred cceeeeccCccccceeccCCCceeeEeecCccHHHHhhhhcc
Confidence 778999999999999997755667999999999876655543
No 114
>KOG0302 consensus Ribosome Assembly protein [General function prediction only]
Probab=99.94 E-value=8.2e-25 Score=183.86 Aligned_cols=261 Identities=24% Similarity=0.425 Sum_probs=195.9
Q ss_pred eeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEecccc-------ccccCccccceeeeeeccccceEEEEEeCCC-
Q 036314 60 LEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAE-------ELVNHPKKIRSFKILRGHKASVHSIAAETSG- 131 (347)
Q Consensus 60 l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~-------~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~- 131 (347)
..+|.+.++.++..+.+ .....++=++.|.|++|++... ++.......+++.++.+|...=..++|||--
T Consensus 147 ~i~h~g~~NRvr~~~~~--~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~ 224 (440)
T KOG0302|consen 147 SIPHYGGINRVRVSRLG--NEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKT 224 (440)
T ss_pred ccccccccceeeecccC--CcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeecccccc
Confidence 44677888888887754 3356788899999999997522 2222334567888999999999999999943
Q ss_pred CEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeC--CCCeEEEEecCCcE
Q 036314 132 NMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP--QQETIYSASWDHSV 209 (347)
Q Consensus 132 ~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~l~s~s~dg~v 209 (347)
..++||.--+.|++|...++... ...+.+.+|+..|-.+.|+ ....|+|+|.||+|
T Consensus 225 g~LlsGDc~~~I~lw~~~~g~W~----------------------vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsI 282 (440)
T KOG0302|consen 225 GRLLSGDCVKGIHLWEPSTGSWK----------------------VDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSI 282 (440)
T ss_pred cccccCccccceEeeeeccCcee----------------------ecCccccccccchhhhccCCccCceEEeeecCceE
Confidence 24777777788999987654221 1123466799999999995 34579999999999
Q ss_pred EEEECCCCc---eeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCe
Q 036314 210 RTWDVEMGK---DLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWF 286 (347)
Q Consensus 210 ~vwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~ 286 (347)
+|||+|.+. ++..-.+...++.++|...-. +||+|+.||+++|||+|.-....++.+|.-|...|+++.|+|....
T Consensus 283 rIWDiRs~~~~~~~~~kAh~sDVNVISWnr~~~-lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s 361 (440)
T KOG0302|consen 283 RIWDIRSGPKKAAVSTKAHNSDVNVISWNRREP-LLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDS 361 (440)
T ss_pred EEEEecCCCccceeEeeccCCceeeEEccCCcc-eeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeEEEeccccCc
Confidence 999999873 333322345788899975544 8999999999999999976555688899999999999999998888
Q ss_pred EEEEEeCCCcEEEEEcCCCc----------------cceeecCC--CCeEEEEeecC--CCEEEEccCCceEEEeecccC
Q 036314 287 HLISASYDGKVMLWDLRTAW----------------PLSVIDSH--KDKVLCADWWR--GDSVISGGVDSKLCVSSGVSI 346 (347)
Q Consensus 287 ~l~s~s~D~~i~lwd~~~~~----------------~~~~~~~h--~~~v~~~~~~~--~~~l~s~s~D~~v~vw~~~~~ 346 (347)
.|++++.|.+|.|||+.... +.+.+.-| +..+..|.|++ ..+|+|.+.|| ++||.++||
T Consensus 362 ~iaasg~D~QitiWDlsvE~D~ee~~~~a~~~L~dlPpQLLFVHqGQke~KevhWH~QiPG~lvsTa~dG-fnVfktIsv 440 (440)
T KOG0302|consen 362 VIAASGEDNQITIWDLSVEADEEEIDQEAAEGLQDLPPQLLFVHQGQKEVKEVHWHRQIPGLLVSTAIDG-FNVFKTISV 440 (440)
T ss_pred eEEeccCCCcEEEEEeeccCChhhhccccccchhcCCceeEEEecchhHhhhheeccCCCCeEEEecccc-eeEEEeccC
Confidence 89999999999999986321 11223334 34678899974 33777778787 567877765
No 115
>KOG4283 consensus Transcription-coupled repair protein CSA, contains WD40 domain [Transcription; Replication, recombination and repair]
Probab=99.94 E-value=4.7e-25 Score=179.93 Aligned_cols=213 Identities=25% Similarity=0.379 Sum_probs=164.8
Q ss_pred eeccccceEEEEEeC-CCCEEEEeeCCCcEEEEecCCCCCCC-ccceeeeccCCCccccccccccc---cccccCCccce
Q 036314 115 LRGHKASVHSIAAET-SGNMVCSGSWDCTISLWRTNDSDAAG-NQVSIKKRKGNNQVEEPQLEGEA---ISTLVGHTQCV 189 (347)
Q Consensus 115 ~~~h~~~V~~v~~s~-~~~~l~sgs~Dg~I~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~h~~~v 189 (347)
.+.|.+.|+++.+.+ .|++++||+.||.|.+||+++..... +.... ...+ ..--.+|.-.|
T Consensus 39 ~r~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~--------------k~~c~v~~~h~~~Hky~i 104 (397)
T KOG4283|consen 39 VRPHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIA--------------KHKCIVAKQHENGHKYAI 104 (397)
T ss_pred eccCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhcccee--------------heeeeccccCCccceeee
Confidence 356999999999876 47999999999999999997532110 00000 0001 01124577788
Q ss_pred EEEEe-C-CCCeEEEEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCC--CcEEEEecCCCcEEEEeCCCCCCCCCe
Q 036314 190 SSVVW-P-QQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEG--SALIAAGGSDPILRIWDPRKPGTSAPV 265 (347)
Q Consensus 190 ~~~~~-~-~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~la~~~~d~~i~iwd~~~~~~~~~~ 265 (347)
.++.| | +..++.++|.|.++++||+++-+....+.....++.-+++|-. -.++|+|..|-.|++-|+..+ ...
T Consensus 105 ss~~WyP~DtGmFtssSFDhtlKVWDtnTlQ~a~~F~me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SG---s~s 181 (397)
T KOG4283|consen 105 SSAIWYPIDTGMFTSSSFDHTLKVWDTNTLQEAVDFKMEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASG---SFS 181 (397)
T ss_pred eeeEEeeecCceeecccccceEEEeecccceeeEEeecCceeehhhcChhhhcceEEEEecCCCcEEEEeccCC---cce
Confidence 99987 5 6678999999999999999998777666666666666665432 247889999999999999864 346
Q ss_pred EEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCC-ccc--------------eeecCCCCeEEEEee-cCCCEE
Q 036314 266 FQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTA-WPL--------------SVIDSHKDKVLCADW-WRGDSV 329 (347)
Q Consensus 266 ~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~-~~~--------------~~~~~h~~~v~~~~~-~~~~~l 329 (347)
.+++||.+.|.++.|+|...+.|+||+.||.||+||+|.. -+. ++-..|.++|.+++| +++.++
T Consensus 182 H~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l 261 (397)
T KOG4283|consen 182 HTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYL 261 (397)
T ss_pred eeeccccCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhh
Confidence 7899999999999999999999999999999999999864 111 122468899999999 589999
Q ss_pred EEccCCceEEEeecc
Q 036314 330 ISGGVDSKLCVSSGV 344 (347)
Q Consensus 330 ~s~s~D~~v~vw~~~ 344 (347)
++++.|..+++|.-.
T Consensus 262 ~~~gtd~r~r~wn~~ 276 (397)
T KOG4283|consen 262 ASCGTDDRIRVWNME 276 (397)
T ss_pred hhccCccceEEeecc
Confidence 999999999999754
No 116
>KOG0270 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.94 E-value=1.8e-24 Score=185.29 Aligned_cols=249 Identities=22% Similarity=0.289 Sum_probs=187.3
Q ss_pred EEEEEeec---CCCceEEEEEccCCCcEEEEeccccccccCc------------cccceeeeeeccccceEEEEEeCCC-
Q 036314 68 SSVNIIKS---DGLKYVTVATASKDQTLRLWKFDAEELVNHP------------KKIRSFKILRGHKASVHSIAAETSG- 131 (347)
Q Consensus 68 ~~v~~~~~---~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~------------~~~~~~~~~~~h~~~V~~v~~s~~~- 131 (347)
.|+.|..- .+..+.++|.|+.|..|.|||+.--..+.+. +..+.-..-.+|+++|.+++++..-
T Consensus 177 LC~ewld~~~~~~~~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~ 256 (463)
T KOG0270|consen 177 LCIEWLDHGSKSGGAGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFR 256 (463)
T ss_pred hhhhhhhcCCCCCCCcceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccc
Confidence 45555421 2334568999999999999998632211100 0000011234799999999987764
Q ss_pred CEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeC--CCCeEEEEecCCcE
Q 036314 132 NMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP--QQETIYSASWDHSV 209 (347)
Q Consensus 132 ~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~l~s~s~dg~v 209 (347)
+.|||||.|.||++||+.++ ++..++..|++.|.++.|. ....|++|++|+++
T Consensus 257 nVLaSgsaD~TV~lWD~~~g-------------------------~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V 311 (463)
T KOG0270|consen 257 NVLASGSADKTVKLWDVDTG-------------------------KPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTV 311 (463)
T ss_pred eeEEecCCCceEEEEEcCCC-------------------------CcceehhhcCCceeEEEecCCCceEEEeccccceE
Confidence 68899999999999999864 3455677899999999994 45689999999999
Q ss_pred EEEECCCCce-eeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEE
Q 036314 210 RTWDVEMGKD-LSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHL 288 (347)
Q Consensus 210 ~vwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l 288 (347)
++.|.|.... -..+.....+..+.+.+.....+.++..||+|+-+|+|+++ .++.++..|.+.|.++.+++..+.+|
T Consensus 312 ~l~D~R~~~~s~~~wk~~g~VEkv~w~~~se~~f~~~tddG~v~~~D~R~~~--~~vwt~~AHd~~ISgl~~n~~~p~~l 389 (463)
T KOG0270|consen 312 ALKDCRDPSNSGKEWKFDGEVEKVAWDPHSENSFFVSTDDGTVYYFDIRNPG--KPVWTLKAHDDEISGLSVNIQTPGLL 389 (463)
T ss_pred EeeeccCccccCceEEeccceEEEEecCCCceeEEEecCCceEEeeecCCCC--CceeEEEeccCCcceEEecCCCCcce
Confidence 9999995332 34455667788899988888888999999999999999865 56899999999999999999988999
Q ss_pred EEEeCCCcEEEEEcCCCccceeecCCC---CeEEEEeecC--CCEEEEccCCceEEEeecc
Q 036314 289 ISASYDGKVMLWDLRTAWPLSVIDSHK---DKVLCADWWR--GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 289 ~s~s~D~~i~lwd~~~~~~~~~~~~h~---~~v~~~~~~~--~~~l~s~s~D~~v~vw~~~ 344 (347)
+|++.|+.+++|++..-.+-.+ ..|. +...|+++.| ...||.||..+.++||+..
T Consensus 390 ~t~s~d~~Vklw~~~~~~~~~v-~~~~~~~~rl~c~~~~~~~a~~la~GG~k~~~~vwd~~ 449 (463)
T KOG0270|consen 390 STASTDKVVKLWKFDVDSPKSV-KEHSFKLGRLHCFALDPDVAFTLAFGGEKAVLRVWDIF 449 (463)
T ss_pred eeccccceEEEEeecCCCCccc-ccccccccceeecccCCCcceEEEecCccceEEEeecc
Confidence 9999999999999875433222 1222 2334555544 3469999999999999864
No 117
>KOG1036 consensus Mitotic spindle checkpoint protein BUB3, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning]
Probab=99.93 E-value=7.2e-24 Score=174.00 Aligned_cols=236 Identities=19% Similarity=0.259 Sum_probs=177.5
Q ss_pred cCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCc
Q 036314 63 HCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCT 142 (347)
Q Consensus 63 h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~ 142 (347)
.++.|++|.|++..+ .|+.+|.||++++||+...++. ..-.|+.|+.+++|.+ ...+++|+.||.
T Consensus 12 P~d~IS~v~f~~~~~----~LLvssWDgslrlYdv~~~~l~----------~~~~~~~plL~c~F~d-~~~~~~G~~dg~ 76 (323)
T KOG1036|consen 12 PEDGISSVKFSPSSS----DLLVSSWDGSLRLYDVPANSLK----------LKFKHGAPLLDCAFAD-ESTIVTGGLDGQ 76 (323)
T ss_pred ChhceeeEEEcCcCC----cEEEEeccCcEEEEeccchhhh----------hheecCCceeeeeccC-CceEEEeccCce
Confidence 357799999997544 4677889999999999876431 1235899999999987 457889999999
Q ss_pred EEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeC-CCCeEEEEecCCcEEEEECCCCceee
Q 036314 143 ISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP-QQETIYSASWDHSVRTWDVEMGKDLS 221 (347)
Q Consensus 143 I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~l~s~s~dg~v~vwd~~~~~~~~ 221 (347)
|+++|+..+.. ..+-.|..+|.++.+. ....+++||+|++|++||.+......
T Consensus 77 vr~~Dln~~~~--------------------------~~igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~ 130 (323)
T KOG1036|consen 77 VRRYDLNTGNE--------------------------DQIGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVG 130 (323)
T ss_pred EEEEEecCCcc--------------------------eeeccCCCceEEEEeeccCCeEEEcccCccEEEEecccccccc
Confidence 99999986532 2345688999999874 45679999999999999999755555
Q ss_pred eeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEE
Q 036314 222 DIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWD 301 (347)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd 301 (347)
.+...+.+.|++... +.|+.|+.|..+.+||+|....+. ...-+.-.-.++++++.|++.. .+.+|-||+|-+=.
T Consensus 131 ~~d~~kkVy~~~v~g---~~LvVg~~~r~v~iyDLRn~~~~~-q~reS~lkyqtR~v~~~pn~eG-y~~sSieGRVavE~ 205 (323)
T KOG1036|consen 131 TFDQGKKVYCMDVSG---NRLVVGTSDRKVLIYDLRNLDEPF-QRRESSLKYQTRCVALVPNGEG-YVVSSIEGRVAVEY 205 (323)
T ss_pred ccccCceEEEEeccC---CEEEEeecCceEEEEEcccccchh-hhccccceeEEEEEEEecCCCc-eEEEeecceEEEEc
Confidence 555566888988743 467788899999999999654321 1111223335789999996654 78889999998876
Q ss_pred cCCCcc----ceeecCCC---------CeEEEEeecC-CCEEEEccCCceEEEeecc
Q 036314 302 LRTAWP----LSVIDSHK---------DKVLCADWWR-GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 302 ~~~~~~----~~~~~~h~---------~~v~~~~~~~-~~~l~s~s~D~~v~vw~~~ 344 (347)
++..+. -..|..|. -+|.+++|+| -+.||||+.||.|.+|++-
T Consensus 206 ~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fhp~~~tfaTgGsDG~V~~Wd~~ 262 (323)
T KOG1036|consen 206 FDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFHPIHGTFATGGSDGIVNIWDLF 262 (323)
T ss_pred cCCchHHhhhceeEEeeecccCCceEEEEeceeEeccccceEEecCCCceEEEccCc
Confidence 665421 23455554 2578999987 5679999999999999974
No 118
>KOG1063 consensus RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily [Chromatin structure and dynamics; Transcription]
Probab=99.93 E-value=1.3e-23 Score=188.93 Aligned_cols=319 Identities=21% Similarity=0.247 Sum_probs=218.0
Q ss_pred CCCCCcCCceeeccCCC-CC---EEEEEecCCeEEEEcCC-C--eEEEEeeccCCceEEEEEeecCCCceEEEEEccCCC
Q 036314 18 EEPSLHDDWVSAVDGSN-PG---FILTGCYDNLGRVWKAG-G--VCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQ 90 (347)
Q Consensus 18 ~~~~~h~~~v~~~~~~~-~~---~l~sg~~d~~i~iw~~~-~--~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg 90 (347)
....||...|+|+..-+ .. +++||+.|++|++|.++ . .++..+.+|...+.++.--+ ..+.+.+.|+
T Consensus 48 t~l~GH~a~VnC~~~l~~s~~~a~~vsG~sD~~v~lW~l~~~~~~~i~~~~g~~~~~~cv~a~~------~~~~~~~ad~ 121 (764)
T KOG1063|consen 48 TTLDGHVARVNCVHWLPTSEIVAEMVSGDSDGRVILWKLRDEYLIKIYTIQGHCKECVCVVARS------SVMTCKAADG 121 (764)
T ss_pred EeccCCccceEEEEEcccccccceEEEccCCCcEEEEEEeehheEEEEeecCcceeEEEEEeee------eEEEeeccCc
Confidence 45679999999999542 22 79999999999999975 2 45667888888777764322 1223337899
Q ss_pred cEEEEecccccc--c------------------c---------------------CccccceeeeeeccccceEEEEEeC
Q 036314 91 TLRLWKFDAEEL--V------------------N---------------------HPKKIRSFKILRGHKASVHSIAAET 129 (347)
Q Consensus 91 ~v~~wd~~~~~~--~------------------~---------------------~~~~~~~~~~~~~h~~~V~~v~~s~ 129 (347)
++.+|+.+..++ + . ...+.+....+.||.+.|++++|..
T Consensus 122 ~v~vw~~~~~e~~~~~~~rf~~k~~ipLcL~~~~~~~~~lla~Ggs~~~v~~~s~~~d~f~~v~el~GH~DWIrsl~f~~ 201 (764)
T KOG1063|consen 122 TVSVWDKQQDEVFLLAVLRFEIKEAIPLCLAALKNNKTFLLACGGSKFVVDLYSSSADSFARVAELEGHTDWIRSLAFAR 201 (764)
T ss_pred eEEEeecCCCceeeehheehhhhhHhhHHHhhhccCCcEEEEecCcceEEEEeccCCcceeEEEEeeccchhhhhhhhhc
Confidence 999999855441 0 0 0112345567899999999999976
Q ss_pred CC---CEEEEeeCCCcEEEEecCCCCCCCccc---eeeeccCC---CccccccccccccccccCCccceEEEEeC-CCCe
Q 036314 130 SG---NMVCSGSWDCTISLWRTNDSDAAGNQV---SIKKRKGN---NQVEEPQLEGEAISTLVGHTQCVSSVVWP-QQET 199 (347)
Q Consensus 130 ~~---~~l~sgs~Dg~I~iwd~~~~~~~~~~~---~~~~~~~~---~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~ 199 (347)
.+ -+++|+|.|..||||++.-.....+.. ........ ......++.-..-..+.||+++|.++.|. .+..
T Consensus 202 ~~~~~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f~~l~~i~~~is~eall~GHeDWV~sv~W~p~~~~ 281 (764)
T KOG1063|consen 202 LGGDDLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSNLPVFMILEEIQYRISFEALLMGHEDWVYSVWWHPEGLD 281 (764)
T ss_pred cCCCcEEEEecCCceEEEEEEEEecCCccccccccccccccCCceeeeeeeEEEEEehhhhhcCcccceEEEEEccchhh
Confidence 54 488999999999999876433211100 00000000 00000011111123567999999999995 5568
Q ss_pred EEEEecCCcEEEEECCC--CceeeeeeeC----e--eeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCC
Q 036314 200 IYSASWDHSVRTWDVEM--GKDLSDIFCG----K--ALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSH 271 (347)
Q Consensus 200 l~s~s~dg~v~vwd~~~--~~~~~~~~~~----~--~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h 271 (347)
|+|+|.|+++.+|.... |-.+..+..+ . ......|.++ ++.+++-+.-|..++|-...+....+....+||
T Consensus 282 LLSASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n-~~~ii~~g~~Gg~hlWkt~d~~~w~~~~~iSGH 360 (764)
T KOG1063|consen 282 LLSASADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPN-SNVIIAHGRTGGFHLWKTKDKTFWTQEPVISGH 360 (764)
T ss_pred heecccCcceEEEecCCccceEEEEEEeecccccccceeeEEEcCC-CCEEEEecccCcEEEEeccCccceeeccccccc
Confidence 99999999999997543 3344333321 1 2444556554 467788889999999984333333344567899
Q ss_pred CCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCc----cceeecCCCCeEEEEeecC-CCEEEEccCCceEEEeecc
Q 036314 272 NSWISACKWHNKSWFHLISASYDGKVMLWDLRTAW----PLSVIDSHKDKVLCADWWR-GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 272 ~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~----~~~~~~~h~~~v~~~~~~~-~~~l~s~s~D~~v~vw~~~ 344 (347)
.+.|.+++|.|.|. +|+|+|.|.+-||+-.-..+ .+..-+-|...+.|++|-+ .-+++||.....+|+++-|
T Consensus 361 ~~~V~dv~W~psGe-flLsvs~DQTTRlFa~wg~q~~wHEiaRPQiHGyDl~c~~~vn~~~~FVSgAdEKVlRvF~aP 437 (764)
T KOG1063|consen 361 VDGVKDVDWDPSGE-FLLSVSLDQTTRLFARWGRQQEWHEIARPQIHGYDLTCLSFVNEDLQFVSGADEKVLRVFEAP 437 (764)
T ss_pred cccceeeeecCCCC-EEEEeccccceeeecccccccceeeecccccccccceeeehccCCceeeecccceeeeeecCc
Confidence 99999999999997 59999999999998654221 1233356888999999977 5579999999999999876
No 119
>KOG0646 consensus WD40 repeat protein [General function prediction only]
Probab=99.93 E-value=3e-24 Score=184.95 Aligned_cols=257 Identities=18% Similarity=0.261 Sum_probs=198.2
Q ss_pred CEEEEEecC-CeEEEEcCCCe-EEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceee
Q 036314 36 GFILTGCYD-NLGRVWKAGGV-CTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFK 113 (347)
Q Consensus 36 ~~l~sg~~d-~~i~iw~~~~~-~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~ 113 (347)
.+++++... ..+-+|....+ ..+...--.++|.+++-++. +.+|+.|..-|.+.+|.+.+|.++ .
T Consensus 51 ~yllsaq~~rp~l~vw~i~k~~~~~q~~v~Pg~v~al~s~n~----G~~l~ag~i~g~lYlWelssG~LL---------~ 117 (476)
T KOG0646|consen 51 EYLLSAQLKRPLLHVWEILKKDQVVQYIVLPGPVHALASSNL----GYFLLAGTISGNLYLWELSSGILL---------N 117 (476)
T ss_pred hheeeecccCccccccccCchhhhhhhcccccceeeeecCCC----ceEEEeecccCcEEEEEeccccHH---------H
Confidence 456665543 47778876432 11212223467889887773 357777779999999999998754 3
Q ss_pred eeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEE
Q 036314 114 ILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVV 193 (347)
Q Consensus 114 ~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 193 (347)
.+.+|-.+|+++.|+.||.+|+|||.||.|.+|.+.+.-... ....-.++..+..|+-+|.++.
T Consensus 118 v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~----------------~~~~~~p~~~f~~HtlsITDl~ 181 (476)
T KOG0646|consen 118 VLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSAD----------------NDHSVKPLHIFSDHTLSITDLQ 181 (476)
T ss_pred HHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeecccc----------------cCCCccceeeeccCcceeEEEE
Confidence 568999999999999999999999999999999876421110 0001235667889999999998
Q ss_pred eCC---CCeEEEEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCC----------
Q 036314 194 WPQ---QETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPG---------- 260 (347)
Q Consensus 194 ~~~---~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~---------- 260 (347)
... ..+|+|+|.|+++++||+..+..+.++..+..+.+++++|. ...+..|+.+|+|.+.++....
T Consensus 182 ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~fp~si~av~lDpa-e~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~ 260 (476)
T KOG0646|consen 182 IGSGGTNARLYTASEDRTIKLWDLSLGVLLLTITFPSSIKAVALDPA-ERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKG 260 (476)
T ss_pred ecCCCccceEEEecCCceEEEEEeccceeeEEEecCCcceeEEEccc-ccEEEecCCcceEEeeehhcCCcccccccccc
Confidence 743 35799999999999999999999988888888999999765 4577889999999998875321
Q ss_pred ---CCCCeEEecCCCC--CeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEee
Q 036314 261 ---TSAPVFQFSSHNS--WISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADW 323 (347)
Q Consensus 261 ---~~~~~~~~~~h~~--~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~ 323 (347)
.......+.||.+ .|+|++.+-|+. +|++|+.||.|.|||+...+.++++..-.++|..+.+
T Consensus 261 ~~~~~t~~~~~~Gh~~~~~ITcLais~Dgt-lLlSGd~dg~VcvWdi~S~Q~iRtl~~~kgpVtnL~i 327 (476)
T KOG0646|consen 261 RHEENTQINVLVGHENESAITCLAISTDGT-LLLSGDEDGKVCVWDIYSKQCIRTLQTSKGPVTNLQI 327 (476)
T ss_pred cccccceeeeeccccCCcceeEEEEecCcc-EEEeeCCCCCEEEEecchHHHHHHHhhhccccceeEe
Confidence 0112456778988 899999999984 7999999999999999988888887755778887777
No 120
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.93 E-value=5.7e-24 Score=200.07 Aligned_cols=267 Identities=18% Similarity=0.254 Sum_probs=195.5
Q ss_pred ccCCceEEEEEeecCCCceEEEEEcc--CCCcEEEEeccccc--cc-cCccccceeeeeeccccceEEEEEeCCCCEEEE
Q 036314 62 GHCGAVSSVNIIKSDGLKYVTVATAS--KDQTLRLWKFDAEE--LV-NHPKKIRSFKILRGHKASVHSIAAETSGNMVCS 136 (347)
Q Consensus 62 ~h~~~V~~v~~~~~~~~~~~~l~s~s--~Dg~v~~wd~~~~~--~~-~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~s 136 (347)
.++..|.+|+++| ++..++||+ .|+.+++|+.+.=- .. ....-.+.+.....|.+.|+|+.|++||++||+
T Consensus 11 H~~~~IfSIdv~p----dg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAs 86 (942)
T KOG0973|consen 11 HNEKSIFSIDVHP----DGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLAS 86 (942)
T ss_pred cCCeeEEEEEecC----CceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEee
Confidence 3456688999999 445799999 99999999864210 00 001123455667889999999999999999999
Q ss_pred eeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECC
Q 036314 137 GSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVE 215 (347)
Q Consensus 137 gs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~ 215 (347)
||.|+.|.||..... +.........+....+ .-++...+.+|...|..+.| |++.+|+|+|.|++|.+||.+
T Consensus 87 GSDD~~v~iW~~~~~---~~~~~fgs~g~~~~vE----~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~ 159 (942)
T KOG0973|consen 87 GSDDRLVMIWERAEI---GSGTVFGSTGGAKNVE----SWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAK 159 (942)
T ss_pred ccCcceEEEeeeccc---CCcccccccccccccc----eeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEccc
Confidence 999999999986531 0000000000001111 12346678999999999999 578899999999999999999
Q ss_pred CCceeeeeeeC-eeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEec------CCCCCeeEEEeCCCCCeEE
Q 036314 216 MGKDLSDIFCG-KALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFS------SHNSWISACKWHNKSWFHL 288 (347)
Q Consensus 216 ~~~~~~~~~~~-~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~------~h~~~v~~v~~s~~~~~~l 288 (347)
+.+.+..+..+ ..+..+.|+|- +++||+-+.|++|++|++..- ...+.+. +-......+.|||||.+ |
T Consensus 160 tF~~~~vl~~H~s~VKGvs~DP~-Gky~ASqsdDrtikvwrt~dw---~i~k~It~pf~~~~~~T~f~RlSWSPDG~~-l 234 (942)
T KOG0973|consen 160 TFELLKVLRGHQSLVKGVSWDPI-GKYFASQSDDRTLKVWRTSDW---GIEKSITKPFEESPLTTFFLRLSWSPDGHH-L 234 (942)
T ss_pred cceeeeeeecccccccceEECCc-cCeeeeecCCceEEEEEcccc---eeeEeeccchhhCCCcceeeecccCCCcCe-e
Confidence 99777777654 36788999765 468999999999999996531 1122222 23346788999999975 7
Q ss_pred EEEe-CC---CcEEEEEcCCCccceeecCCCCeEEEEeecC------CC------------EEEEccCCceEEEeecc
Q 036314 289 ISAS-YD---GKVMLWDLRTAWPLSVIDSHKDKVLCADWWR------GD------------SVISGGVDSKLCVSSGV 344 (347)
Q Consensus 289 ~s~s-~D---~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~------~~------------~l~s~s~D~~v~vw~~~ 344 (347)
++.. .+ .++.|.+-.+.+.-..|-||.+++.++.|+| -+ .+|+||.|++|.||.+-
T Consensus 235 as~nA~n~~~~~~~IieR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~ 312 (942)
T KOG0973|consen 235 ASPNAVNGGKSTIAIIERGTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTA 312 (942)
T ss_pred cchhhccCCcceeEEEecCCceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecC
Confidence 7664 23 4788888877777788999999999999974 12 58999999999999874
No 121
>KOG1063 consensus RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily [Chromatin structure and dynamics; Transcription]
Probab=99.93 E-value=1.6e-23 Score=188.24 Aligned_cols=292 Identities=21% Similarity=0.329 Sum_probs=216.8
Q ss_pred CCCcCCceeeccCC-C---CCEEEEEecCCeEEEEcC--CC--------------------eEE----------EEeecc
Q 036314 20 PSLHDDWVSAVDGS-N---PGFILTGCYDNLGRVWKA--GG--------------------VCT----------HILEGH 63 (347)
Q Consensus 20 ~~~h~~~v~~~~~~-~---~~~l~sg~~d~~i~iw~~--~~--------------------~~~----------~~l~~h 63 (347)
..||++||.+++|. . +-+|||+|+|..||||++ .+ .+. ..+.||
T Consensus 187 l~GH~DWIrsl~f~~~~~~~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f~~l~~i~~~is~eall~GH 266 (764)
T KOG1063|consen 187 LEGHTDWIRSLAFARLGGDDLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSNLPVFMILEEIQYRISFEALLMGH 266 (764)
T ss_pred eeccchhhhhhhhhccCCCcEEEEecCCceEEEEEEEEecCCccccccccccccccCCceeeeeeeEEEEEehhhhhcCc
Confidence 56999999999986 2 238999999999999964 12 111 235699
Q ss_pred CCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcE
Q 036314 64 CGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTI 143 (347)
Q Consensus 64 ~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I 143 (347)
++-|.++.|+|.. ..|+++|+|.++.+|.....+.+ ......+....|....-...-|+|+++.+++-++-|..
T Consensus 267 eDWV~sv~W~p~~----~~LLSASaDksmiiW~pd~~tGi--Wv~~vRlGe~gg~a~GF~g~lw~~n~~~ii~~g~~Gg~ 340 (764)
T KOG1063|consen 267 EDWVYSVWWHPEG----LDLLSASADKSMIIWKPDENTGI--WVDVVRLGEVGGSAGGFWGGLWSPNSNVIIAHGRTGGF 340 (764)
T ss_pred ccceEEEEEccch----hhheecccCcceEEEecCCccce--EEEEEEeecccccccceeeEEEcCCCCEEEEecccCcE
Confidence 9999999999954 46899999999999987654211 00111222233445567788899999999999999999
Q ss_pred EEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCcee--
Q 036314 144 SLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDL-- 220 (347)
Q Consensus 144 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~-- 220 (347)
++|...+.. .-.......||.+.|.++.| |.|++|+++|.|.+-|++--- ++..
T Consensus 341 hlWkt~d~~----------------------~w~~~~~iSGH~~~V~dv~W~psGeflLsvs~DQTTRlFa~w-g~q~~w 397 (764)
T KOG1063|consen 341 HLWKTKDKT----------------------FWTQEPVISGHVDGVKDVDWDPSGEFLLSVSLDQTTRLFARW-GRQQEW 397 (764)
T ss_pred EEEeccCcc----------------------ceeeccccccccccceeeeecCCCCEEEEeccccceeeeccc-ccccce
Confidence 999732210 01223456799999999999 678999999999999998643 2211
Q ss_pred eee----eeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCC-------------------------------------C
Q 036314 221 SDI----FCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRK-------------------------------------P 259 (347)
Q Consensus 221 ~~~----~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~-------------------------------------~ 259 (347)
+.+ .++..++|+++-+. ...+++|.+...+|+|+..+ +
T Consensus 398 HEiaRPQiHGyDl~c~~~vn~-~~~FVSgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~ 476 (764)
T KOG1063|consen 398 HEIARPQIHGYDLTCLSFVNE-DLQFVSGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFP 476 (764)
T ss_pred eeecccccccccceeeehccC-CceeeecccceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCcc
Confidence 111 24567888888543 45678888888999997531 0
Q ss_pred ------CC-------C-----------------------CCeEEecCCCCCeeEEEeCCCCCeEEEEEeCC-----CcEE
Q 036314 260 ------GT-------S-----------------------APVFQFSSHNSWISACKWHNKSWFHLISASYD-----GKVM 298 (347)
Q Consensus 260 ------~~-------~-----------------------~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D-----~~i~ 298 (347)
+. + ..+..+-||.-.|.+++.+|++. ++||++.. ..|+
T Consensus 477 ~e~~~G~~~~~~~et~~~~~p~~L~ePP~EdqLq~~tLwPEv~KLYGHGyEv~~l~~s~~gn-liASaCKS~~~ehAvI~ 555 (764)
T KOG1063|consen 477 GETNTGGEAAVCAETPLAAAPCELTEPPTEDQLQQNTLWPEVHKLYGHGYEVYALAISPTGN-LIASACKSSLKEHAVIR 555 (764)
T ss_pred cccccccccceeeecccccCchhccCCChHHHHHHhccchhhHHhccCceeEEEEEecCCCC-EEeehhhhCCccceEEE
Confidence 00 0 00012458999999999999985 69998754 4599
Q ss_pred EEEcCCCccceeecCCCCeEEEEeecC-CCEEEEccCCceEEEee
Q 036314 299 LWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKLCVSS 342 (347)
Q Consensus 299 lwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~D~~v~vw~ 342 (347)
||+.......+.+.+|.=.|+.++||| |++|+++|.|+++.||.
T Consensus 556 lw~t~~W~~~~~L~~HsLTVT~l~FSpdg~~LLsvsRDRt~sl~~ 600 (764)
T KOG1063|consen 556 LWNTANWLQVQELEGHSLTVTRLAFSPDGRYLLSVSRDRTVSLYE 600 (764)
T ss_pred EEeccchhhhheecccceEEEEEEECCCCcEEEEeecCceEEeee
Confidence 999998888889999999999999985 77899999999999996
No 122
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=99.93 E-value=5.3e-24 Score=185.49 Aligned_cols=270 Identities=20% Similarity=0.300 Sum_probs=185.0
Q ss_pred CCCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCC
Q 036314 52 AGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSG 131 (347)
Q Consensus 52 ~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~ 131 (347)
+.+.+...|.+|+..|.++++.|.+ ..++|||.|-+|++||++.-.. .....+.+. +.-...|+++.|++.|
T Consensus 155 IP~shEi~l~hgtk~Vsal~~Dp~G----aR~~sGs~Dy~v~~wDf~gMda--s~~~fr~l~--P~E~h~i~sl~ys~Tg 226 (641)
T KOG0772|consen 155 IPGSHEIQLKHGTKIVSALAVDPSG----ARFVSGSLDYTVKFWDFQGMDA--SMRSFRQLQ--PCETHQINSLQYSVTG 226 (641)
T ss_pred CCccceEeccCCceEEEEeeecCCC----ceeeeccccceEEEEecccccc--cchhhhccC--cccccccceeeecCCC
Confidence 3445566789999999999998854 4699999999999999874321 111122222 2234568999999999
Q ss_pred CEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeC--CCCeEEEEecCCcE
Q 036314 132 NMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP--QQETIYSASWDHSV 209 (347)
Q Consensus 132 ~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~l~s~s~dg~v 209 (347)
.+|+..+....++|+|-...... + .. ...++- ..+..-+||...+.+-.|. ..+.+++++.||++
T Consensus 227 ~~iLvvsg~aqakl~DRdG~~~~-e---~~--------KGDQYI-~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~Dgtl 293 (641)
T KOG0772|consen 227 DQILVVSGSAQAKLLDRDGFEIV-E---FS--------KGDQYI-RDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTL 293 (641)
T ss_pred CeEEEEecCcceeEEccCCceee-e---ee--------ccchhh-hhhhccCCceeeeeccccccCcccceEEecCCCcE
Confidence 99998888889999986532110 0 00 000000 0122337899999999994 34579999999999
Q ss_pred EEEECCCCceeeeee-e----Ce--eeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCC--CeeEEEe
Q 036314 210 RTWDVEMGKDLSDIF-C----GK--ALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNS--WISACKW 280 (347)
Q Consensus 210 ~vwd~~~~~~~~~~~-~----~~--~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~--~v~~v~~ 280 (347)
|+||++..+....+. . +. ++...+|+++ +.+||+|..||.|.+||.+..........-..|.. .|+|+.|
T Consensus 294 RiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrd-g~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~F 372 (641)
T KOG0772|consen 294 RIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRD-GKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISF 372 (641)
T ss_pred EEEecCCchhheeEEeeccCCCcccCceeeecCCC-cchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEe
Confidence 999998764333322 1 11 4566778665 55799999999999999764332222344467877 7999999
Q ss_pred CCCCCeEEEEEeCCCcEEEEEcCCC-ccceeecCCC--CeEEEEeecCCCE-EEEccC------CceEEEeecc
Q 036314 281 HNKSWFHLISASYDGKVMLWDLRTA-WPLSVIDSHK--DKVLCADWWRGDS-VISGGV------DSKLCVSSGV 344 (347)
Q Consensus 281 s~~~~~~l~s~s~D~~i~lwd~~~~-~~~~~~~~h~--~~v~~~~~~~~~~-l~s~s~------D~~v~vw~~~ 344 (347)
|++|. +|+|-+.|+++++||++.. +++.++.+-. -+-+.++|||... |++|.. -+++.+++.-
T Consensus 373 S~dg~-~LlSRg~D~tLKvWDLrq~kkpL~~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~ 445 (641)
T KOG0772|consen 373 SYDGN-YLLSRGFDDTLKVWDLRQFKKPLNVRTGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRM 445 (641)
T ss_pred ccccc-hhhhccCCCceeeeeccccccchhhhcCCCccCCCCccccCCCceEEEecccccCCCCCceEEEEecc
Confidence 99996 5999999999999999985 5566554422 2346789998665 556542 3567776643
No 123
>KOG1007 consensus WD repeat protein TSSC1, WD repeat superfamily [Function unknown]
Probab=99.93 E-value=1.4e-23 Score=170.83 Aligned_cols=275 Identities=21% Similarity=0.315 Sum_probs=197.6
Q ss_pred cCCeEEEEcC--CC-e-EEEEeeccCCceEEEEEeecCCCceEEEEEccCC-------CcEEEEeccccccccCccccce
Q 036314 43 YDNLGRVWKA--GG-V-CTHILEGHCGAVSSVNIIKSDGLKYVTVATASKD-------QTLRLWKFDAEELVNHPKKIRS 111 (347)
Q Consensus 43 ~d~~i~iw~~--~~-~-~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~D-------g~v~~wd~~~~~~~~~~~~~~~ 111 (347)
.|++|.+-+. .+ . ..+.|..|.+.|..++-+|-+. ..|+|+.+| -.+.||.+....-.......++
T Consensus 38 ~dNqVhll~~d~e~s~l~skvf~h~agEvw~las~P~d~---~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~tlE~ 114 (370)
T KOG1007|consen 38 EDNQVHLLRLDSEGSELLSKVFFHHAGEVWDLASSPFDQ---RILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSSTLEC 114 (370)
T ss_pred CcceeEEEEecCccchhhhhhhhcCCcceehhhcCCCCC---ceEEEEEeccCCCcceeeEEEEecccccCccccchhhH
Confidence 3566666543 22 2 2456888999999999888544 356766553 2478999865421111122344
Q ss_pred eeeee-ccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCC-CccceeeeccCCCccccccccccccccccCCccce
Q 036314 112 FKILR-GHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAA-GNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCV 189 (347)
Q Consensus 112 ~~~~~-~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 189 (347)
+..+. .|-+.|.|+.|.|++..+++-. |..|.+|++...... ....+ ..-..|+...
T Consensus 115 v~~Ldteavg~i~cvew~Pns~klasm~-dn~i~l~~l~ess~~vaev~s--------------------s~s~e~~~~f 173 (370)
T KOG1007|consen 115 VASLDTEAVGKINCVEWEPNSDKLASMD-DNNIVLWSLDESSKIVAEVLS--------------------SESAEMRHSF 173 (370)
T ss_pred hhcCCHHHhCceeeEEEcCCCCeeEEec-cCceEEEEcccCcchheeecc--------------------ccccccccee
Confidence 44554 4666899999999999888665 889999998765321 00000 0001133344
Q ss_pred EEEEeC---CCCeEEEEecCCcEEEEECCCCceeeeee--eCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCC
Q 036314 190 SSVVWP---QQETIYSASWDHSVRTWDVEMGKDLSDIF--CGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAP 264 (347)
Q Consensus 190 ~~~~~~---~~~~l~s~s~dg~v~vwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~ 264 (347)
.+-.|+ ++..+++. .|++++.||+++.++...+. ++..+..++|.|+...++++++.|+.|+|||.|+. ..+
T Consensus 174 tsg~WspHHdgnqv~tt-~d~tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~t--k~p 250 (370)
T KOG1007|consen 174 TSGAWSPHHDGNQVATT-SDSTLQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKT--KFP 250 (370)
T ss_pred cccccCCCCccceEEEe-CCCcEEEEEccchhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCC--Ccc
Confidence 455563 45667664 68999999999877766665 34568899999988889999999999999999974 456
Q ss_pred eEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCC------------------------c-----cceeecCCC
Q 036314 265 VFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTA------------------------W-----PLSVIDSHK 315 (347)
Q Consensus 265 ~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~------------------------~-----~~~~~~~h~ 315 (347)
++.+.+|.-||.+++|+|.-..+|+|++.|..|.+|....- + .+.++..|+
T Consensus 251 v~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tydehE 330 (370)
T KOG1007|consen 251 VQELPGHSHWVWAVRFNPEHDQLILSGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHE 330 (370)
T ss_pred ccccCCCceEEEEEEecCccceEEEecCCCceeEEEeccccccccccccccccccCcchhhHHhcccccccccccccccc
Confidence 89999999999999999998889999999999999953210 0 134677899
Q ss_pred CeEEEEeecC--CCEEEEccCCceEEEeecc
Q 036314 316 DKVLCADWWR--GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 316 ~~v~~~~~~~--~~~l~s~s~D~~v~vw~~~ 344 (347)
+.|++++|+. .-.+||-|.||.+.|-+.+
T Consensus 331 DSVY~~aWSsadPWiFASLSYDGRviIs~V~ 361 (370)
T KOG1007|consen 331 DSVYALAWSSADPWIFASLSYDGRVIISSVP 361 (370)
T ss_pred cceEEEeeccCCCeeEEEeccCceEEeecCC
Confidence 9999999973 4479999999999987654
No 124
>KOG2096 consensus WD40 repeat protein [General function prediction only]
Probab=99.92 E-value=9.2e-23 Score=168.23 Aligned_cols=288 Identities=16% Similarity=0.186 Sum_probs=192.7
Q ss_pred CCCcCCceeeccCC-CCCEEEEEecCCeEEEEcCCC------eEEEE-ee-ccCCceEEEEEeecCCCceEEEEEccCCC
Q 036314 20 PSLHDDWVSAVDGS-NPGFILTGCYDNLGRVWKAGG------VCTHI-LE-GHCGAVSSVNIIKSDGLKYVTVATASKDQ 90 (347)
Q Consensus 20 ~~~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~~------~~~~~-l~-~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg 90 (347)
+.+|.+.|++++|+ +|.+|||.+.|++||+|+... .+++. +. +| -+.++|.|+... .+++.-...
T Consensus 82 LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dh---pT~V~FapDc~s---~vv~~~~g~ 155 (420)
T KOG2096|consen 82 LKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDH---PTRVVFAPDCKS---VVVSVKRGN 155 (420)
T ss_pred hhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccccCCC---ceEEEECCCcce---EEEEEccCC
Confidence 56899999999997 678999999999999998742 22221 11 23 467889886542 556666777
Q ss_pred cEEEEeccccc---cccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCC
Q 036314 91 TLRLWKFDAEE---LVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNN 167 (347)
Q Consensus 91 ~v~~wd~~~~~---~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~ 167 (347)
++++|.+...+ .....-++-....-+-|+-.+..+-....+++|.|++.|.+|.||++... ..+..
T Consensus 156 ~l~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lkGq-~L~~i---------- 224 (420)
T KOG2096|consen 156 KLCVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLKGQ-LLQSI---------- 224 (420)
T ss_pred EEEEEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecCCc-eeeee----------
Confidence 99999875432 11111111111122357778888888888899999999999999998622 11000
Q ss_pred ccccccccccccccccCCccceEEEEeCCCCeEEEEecCCcEEEEECC---CCc-----eeeeeee-CeeeEEEEeeCCC
Q 036314 168 QVEEPQLEGEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVE---MGK-----DLSDIFC-GKALNCIDIGGEG 238 (347)
Q Consensus 168 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~dg~v~vwd~~---~~~-----~~~~~~~-~~~~~~~~~~~~~ 238 (347)
....+..|..+| .|+|+++++++.---|++|.+- .|. .+..+.. ...+...+|++ +
T Consensus 225 ----------dtnq~~n~~aav----SP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn-~ 289 (420)
T KOG2096|consen 225 ----------DTNQSSNYDAAV----SPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSN-S 289 (420)
T ss_pred ----------ccccccccceee----CCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCC-C
Confidence 001122222222 3889999999999999999863 332 1222322 34678888865 4
Q ss_pred CcEEEEecCCCcEEEEeCCC----CCCCCCeEEe----cCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCcccee
Q 036314 239 SALIAAGGSDPILRIWDPRK----PGTSAPVFQF----SSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSV 310 (347)
Q Consensus 239 ~~~la~~~~d~~i~iwd~~~----~~~~~~~~~~----~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~ 310 (347)
+..+++.+.||++++||+.- ...+..+... ....+.-..+..+|.+. +++.+...+++++..++++....
T Consensus 290 S~r~vtvSkDG~wriwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~--~lA~s~gs~l~~~~se~g~~~~~ 367 (420)
T KOG2096|consen 290 STRAVTVSKDGKWRIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPVRLELSPSGD--SLAVSFGSDLKVFASEDGKDYPE 367 (420)
T ss_pred cceeEEEecCCcEEEeeccceEecCCCchHhhcCCcchhhcCCCceEEEeCCCCc--EEEeecCCceEEEEcccCccchh
Confidence 56788999999999999752 1112112211 11222334799999985 45566677899999999877766
Q ss_pred ec-CCCCeEEEEeec-CCCEEEEccCCceEEEee
Q 036314 311 ID-SHKDKVLCADWW-RGDSVISGGVDSKLCVSS 342 (347)
Q Consensus 311 ~~-~h~~~v~~~~~~-~~~~l~s~s~D~~v~vw~ 342 (347)
++ .|.+.|.+++|+ +|+++||+| |+-++|-.
T Consensus 368 ~e~~h~~~Is~is~~~~g~~~atcG-dr~vrv~~ 400 (420)
T KOG2096|consen 368 LEDIHSTTISSISYSSDGKYIATCG-DRYVRVIR 400 (420)
T ss_pred HHHhhcCceeeEEecCCCcEEeeec-ceeeeeec
Confidence 64 689999999997 588899987 77777765
No 125
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.92 E-value=7.4e-22 Score=173.55 Aligned_cols=265 Identities=11% Similarity=0.083 Sum_probs=181.5
Q ss_pred CEEEEEecCCeEEEEcCC-CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeee
Q 036314 36 GFILTGCYDNLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKI 114 (347)
Q Consensus 36 ~~l~sg~~d~~i~iw~~~-~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~ 114 (347)
.+++|++.|+.+++||.. +.+++.+.+|.. +.+++|+|++. ..+++++.|+.|++||+.+++. ...
T Consensus 2 ~~~~s~~~d~~v~~~d~~t~~~~~~~~~~~~-~~~l~~~~dg~---~l~~~~~~~~~v~~~d~~~~~~---------~~~ 68 (300)
T TIGR03866 2 KAYVSNEKDNTISVIDTATLEVTRTFPVGQR-PRGITLSKDGK---LLYVCASDSDTIQVIDLATGEV---------IGT 68 (300)
T ss_pred cEEEEecCCCEEEEEECCCCceEEEEECCCC-CCceEECCCCC---EEEEEECCCCeEEEEECCCCcE---------EEe
Confidence 478899999999999974 667777776654 67899988543 2346778899999999876543 223
Q ss_pred eeccccceEEEEEeCCCCEEE-EeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEE
Q 036314 115 LRGHKASVHSIAAETSGNMVC-SGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVV 193 (347)
Q Consensus 115 ~~~h~~~V~~v~~s~~~~~l~-sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 193 (347)
+..+.. +..++++|+++.++ +++.|+.+++||+.+... +..+.. ...+.++.
T Consensus 69 ~~~~~~-~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~~-------------------------~~~~~~-~~~~~~~~ 121 (300)
T TIGR03866 69 LPSGPD-PELFALHPNGKILYIANEDDNLVTVIDIETRKV-------------------------LAEIPV-GVEPEGMA 121 (300)
T ss_pred ccCCCC-ccEEEECCCCCEEEEEcCCCCeEEEEECCCCeE-------------------------EeEeeC-CCCcceEE
Confidence 333333 46788999998765 456789999999875321 111111 11235566
Q ss_pred e-CCCCeEEEEecCC-cEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCC
Q 036314 194 W-PQQETIYSASWDH-SVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSH 271 (347)
Q Consensus 194 ~-~~~~~l~s~s~dg-~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h 271 (347)
| |++..+++++.++ .+.+||.++++....+........+.+.+++..+++++..++.|++||++.... ...+..+
T Consensus 122 ~~~dg~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~---~~~~~~~ 198 (300)
T TIGR03866 122 VSPDGKIVVNTSETTNMAHFIDTKTYEIVDNVLVDQRPRFAEFTADGKELWVSSEIGGTVSVIDVATRKV---IKKITFE 198 (300)
T ss_pred ECCCCCEEEEEecCCCeEEEEeCCCCeEEEEEEcCCCccEEEECCCCCEEEEEcCCCCEEEEEEcCccee---eeeeeec
Confidence 6 5777888877765 467789988766555444445567788776655556666799999999975321 2222211
Q ss_pred -----CC--CeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeecC-CCEEEEc-cCCceEEEee
Q 036314 272 -----NS--WISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISG-GVDSKLCVSS 342 (347)
Q Consensus 272 -----~~--~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~-s~D~~v~vw~ 342 (347)
.. ....++|+|++...+++.+.++++.+||+++++....+. +...+.++.|+| |++|+++ +.+++|+||+
T Consensus 199 ~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d 277 (300)
T TIGR03866 199 IPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVAVVDAKTYEVLDYLL-VGQRVWQLAFTPDEKYLLTTNGVSNDVSVID 277 (300)
T ss_pred ccccccccCCccceEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEE-eCCCcceEEECCCCCEEEEEcCCCCeEEEEE
Confidence 11 234688999997655666667789999999877665543 345789999985 6677765 5699999999
Q ss_pred cc
Q 036314 343 GV 344 (347)
Q Consensus 343 ~~ 344 (347)
..
T Consensus 278 ~~ 279 (300)
T TIGR03866 278 VA 279 (300)
T ss_pred CC
Confidence 75
No 126
>KOG0267 consensus Microtubule severing protein katanin p80 subunit B (contains WD40 repeats) [Cell cycle control, cell division, chromosome partitioning]
Probab=99.92 E-value=2.8e-25 Score=200.32 Aligned_cols=250 Identities=25% Similarity=0.424 Sum_probs=201.6
Q ss_pred EEEEEecCCeEEEEcCCCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeee
Q 036314 37 FILTGCYDNLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILR 116 (347)
Q Consensus 37 ~l~sg~~d~~i~iw~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~ 116 (347)
+++++..+-.+|+|+.. .+..|...|.++.... ....+++|+.|..+-+|.+.... ++-.|.
T Consensus 6 ~~m~~~~~t~Lr~~~~~-----~~~~hsaav~~lk~~~----s~r~~~~Gg~~~k~~L~~i~kp~---------~i~S~~ 67 (825)
T KOG0267|consen 6 FLMKTKRATKLRVWDTR-----EFVAHSAAVGCLKIRK----SSRSLVTGGEDEKVNLWAIGKPN---------AITSLT 67 (825)
T ss_pred ccceeeeeeccccccch-----hhhhhhhhhceeeeec----cceeeccCCCceeeccccccCCc---------hhheee
Confidence 45566666777888753 4556888888888733 33578999999999999875422 333578
Q ss_pred ccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-C
Q 036314 117 GHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-P 195 (347)
Q Consensus 117 ~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~ 195 (347)
+|+.+|.++.|+++..+|++|+.||+||+||++. +..++++.+|...+.++.| |
T Consensus 68 ~hespIeSl~f~~~E~LlaagsasgtiK~wDlee-------------------------Ak~vrtLtgh~~~~~sv~f~P 122 (825)
T KOG0267|consen 68 GHESPIESLTFDTSERLLAAGSASGTIKVWDLEE-------------------------AKIVRTLTGHLLNITSVDFHP 122 (825)
T ss_pred ccCCcceeeecCcchhhhcccccCCceeeeehhh-------------------------hhhhhhhhccccCcceeeecc
Confidence 9999999999999999999999999999999974 3457789999999999998 5
Q ss_pred CCCeEEEEecCCcEEEEECCCCceeeeeeeC-eeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCC
Q 036314 196 QQETIYSASWDHSVRTWDVEMGKDLSDIFCG-KALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSW 274 (347)
Q Consensus 196 ~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~ 274 (347)
-+.+.++++.|+.+++||.+...+.+....+ ..+.++.|.| ++..++.|++|..++|||+..+ .....|..|...
T Consensus 123 ~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~~~vv~~l~lsP-~Gr~v~~g~ed~tvki~d~~ag---k~~~ef~~~e~~ 198 (825)
T KOG0267|consen 123 YGEFFASGSTDTDLKIWDIRKKGCSHTYKSHTRVVDVLRLSP-DGRWVASGGEDNTVKIWDLTAG---KLSKEFKSHEGK 198 (825)
T ss_pred ceEEeccccccccceehhhhccCceeeecCCcceeEEEeecC-CCceeeccCCcceeeeeccccc---cccccccccccc
Confidence 6788899999999999999865566555432 3567888865 5568999999999999998753 346788899999
Q ss_pred eeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeecC-CCEEEEccC
Q 036314 275 ISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGV 334 (347)
Q Consensus 275 v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~ 334 (347)
+.++.|+|.. .+|++||.|+++++||+++.+.+.........|.|..|.+ +..+.+|-.
T Consensus 199 v~sle~hp~e-~Lla~Gs~d~tv~f~dletfe~I~s~~~~~~~v~~~~fn~~~~~~~~G~q 258 (825)
T KOG0267|consen 199 VQSLEFHPLE-VLLAPGSSDRTVRFWDLETFEVISSGKPETDGVRSLAFNPDGKIVLSGEQ 258 (825)
T ss_pred ccccccCchh-hhhccCCCCceeeeeccceeEEeeccCCccCCceeeeecCCceeeecCch
Confidence 9999999987 5799999999999999999887777777788999999975 555555443
No 127
>KOG1274 consensus WD40 repeat protein [General function prediction only]
Probab=99.92 E-value=6.5e-23 Score=189.70 Aligned_cols=255 Identities=22% Similarity=0.321 Sum_probs=196.0
Q ss_pred CcCCceeeccCC-CCCEEEEEecCCeEEEEcCCC--eEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEecc
Q 036314 22 LHDDWVSAVDGS-NPGFILTGCYDNLGRVWKAGG--VCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFD 98 (347)
Q Consensus 22 ~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~~--~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~ 98 (347)
+|+...+.+.+. ++.+|.|+|.||.||+|+... ....++.-+...|.+++.-. ..+++|+++++|.+|.+.
T Consensus 11 aht~G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e~P~ti~~~g~~v~~ia~~s------~~f~~~s~~~tv~~y~fp 84 (933)
T KOG1274|consen 11 AHTGGLTLICYDPDGEFICTCGSDGDIRKWKTNSDEEEPETIDISGELVSSIACYS------NHFLTGSEQNTVLRYKFP 84 (933)
T ss_pred hccCceEEEEEcCCCCEEEEecCCCceEEeecCCcccCCchhhccCceeEEEeecc------cceEEeeccceEEEeeCC
Confidence 799999999987 567999999999999997432 22233444777888877532 268999999999999987
Q ss_pred ccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccc
Q 036314 99 AEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEA 178 (347)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (347)
+++. -..+...+-++++++|+.+|++++.||.|-.|++-++.+. ..
T Consensus 85 s~~~---------~~iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~-------------------------s~ 130 (933)
T KOG1274|consen 85 SGEE---------DTILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDS-------------------------SQ 130 (933)
T ss_pred CCCc---------cceeeeeeccceEEEEecCCcEEEeecCceeEEEEecccc-------------------------ch
Confidence 6642 1234456788999999999999999999999999988753 34
Q ss_pred cccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeeee---------CeeeEEEEeeCCCCcEEEEecCC
Q 036314 179 ISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFC---------GKALNCIDIGGEGSALIAAGGSD 248 (347)
Q Consensus 179 ~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~la~~~~d 248 (347)
.+.+++|..+|.++.| |.++.|++.+.||+|++||+.++.....+.. ......++|+|.++.+ +....|
T Consensus 131 ~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~l-a~~~~d 209 (933)
T KOG1274|consen 131 EKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTL-AVPPVD 209 (933)
T ss_pred heeecccCCceeeeeEcCCCCEEEEEecCceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeE-EeeccC
Confidence 5678999999999997 6788999999999999999998876655431 2345668898877755 555679
Q ss_pred CcEEEEeCCCCCCCCCeEEe--cCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeecC
Q 036314 249 PILRIWDPRKPGTSAPVFQF--SSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR 325 (347)
Q Consensus 249 ~~i~iwd~~~~~~~~~~~~~--~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~ 325 (347)
+.|++|+... ....+.+ ..+...+..+.|+|.|. +||+++.||.|.|||+++-+ + ......|.|++|.|
T Consensus 210 ~~Vkvy~r~~---we~~f~Lr~~~~ss~~~~~~wsPnG~-YiAAs~~~g~I~vWnv~t~~---~-~~~~~~Vc~~aw~p 280 (933)
T KOG1274|consen 210 NTVKVYSRKG---WELQFKLRDKLSSSKFSDLQWSPNGK-YIAASTLDGQILVWNVDTHE---R-HEFKRAVCCEAWKP 280 (933)
T ss_pred CeEEEEccCC---ceeheeecccccccceEEEEEcCCCc-EEeeeccCCcEEEEecccch---h-ccccceeEEEecCC
Confidence 9999999753 2223333 33444589999999986 59999999999999999722 1 12246788999964
No 128
>KOG0321 consensus WD40 repeat-containing protein L2DTL [Function unknown]
Probab=99.92 E-value=3.1e-23 Score=184.90 Aligned_cols=305 Identities=17% Similarity=0.249 Sum_probs=203.5
Q ss_pred CCCcCCCCCcCCceeeccCCCCC-EEEEEecCCeEEEEcCC-CeEEE--EeeccCCceEEEEEeecCCCceEEEEEccCC
Q 036314 14 PQKEEEPSLHDDWVSAVDGSNPG-FILTGCYDNLGRVWKAG-GVCTH--ILEGHCGAVSSVNIIKSDGLKYVTVATASKD 89 (347)
Q Consensus 14 ~~~~~~~~~h~~~v~~~~~~~~~-~l~sg~~d~~i~iw~~~-~~~~~--~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~D 89 (347)
++.+..+..|.+.|-.+..-++. .|++++.|.++|+||+. +.++. .+.||++.|.+++|++.+. ..+++|+.|
T Consensus 90 e~~lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l~G~~~~~GH~~SvkS~cf~~~n~---~vF~tGgRD 166 (720)
T KOG0321|consen 90 ERQLKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRLVGGRLNLGHTGSVKSECFMPTNP---AVFCTGGRD 166 (720)
T ss_pred hhhhcccccccceeEeeccCCCceeEEEccCCceeeeeeeccceeecceeecccccccchhhhccCCC---cceeeccCC
Confidence 34455688999999999976654 89999999999999985 44543 4889999999999998654 368999999
Q ss_pred CcEEEEecccccc--c-----------cC-cccc----ceeeeeeccccceEE---EEEeCCCCEEEEeeC-CCcEEEEe
Q 036314 90 QTLRLWKFDAEEL--V-----------NH-PKKI----RSFKILRGHKASVHS---IAAETSGNMVCSGSW-DCTISLWR 147 (347)
Q Consensus 90 g~v~~wd~~~~~~--~-----------~~-~~~~----~~~~~~~~h~~~V~~---v~~s~~~~~l~sgs~-Dg~I~iwd 147 (347)
|.|.|||+.-+.. . .. +... +.+....+|...|.+ +.+..|...|||+|. |++||+||
T Consensus 167 g~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWD 246 (720)
T KOG0321|consen 167 GEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWD 246 (720)
T ss_pred CcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCceeeeeEEEEEeccceeeeccCCCcceEEEe
Confidence 9999999864331 0 00 0111 111233456666665 556677888998887 99999999
Q ss_pred cCCCCCCCccceeeeccCCCcccccccccccccc--ccCCc---cceEEEEe-CCCCeEEEEecCCcEEEEECCCCce-e
Q 036314 148 TNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAIST--LVGHT---QCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKD-L 220 (347)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~h~---~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~-~ 220 (347)
+......... +.... +..|. -.+.++.. ..|.+|+....|++|.+||+..-.. .
T Consensus 247 LRk~~~~~r~-------------------ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~sIy~ynm~s~s~sP 307 (720)
T KOG0321|consen 247 LRKNYTAYRQ-------------------EPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTDNSIYFYNMRSLSISP 307 (720)
T ss_pred eccccccccc-------------------CCCcccCccCcccceeeeEEEEecCCCCeEEEEecCCcEEEEeccccCcCc
Confidence 9875432211 01111 11121 12334443 3467776666699999999976432 1
Q ss_pred eeeeeCee---eEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcE
Q 036314 221 SDIFCGKA---LNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKV 297 (347)
Q Consensus 221 ~~~~~~~~---~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i 297 (347)
.....+.. .+--....+++..+++|+.|...++|.+...+ .+...+.+|.-.|.+++|.|....-+|+++.|-++
T Consensus 308 ~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e--~~~~~l~Ght~eVt~V~w~pS~~t~v~TcSdD~~~ 385 (720)
T KOG0321|consen 308 VAEFSGKLNSSFYVKSELSPDDCSLLSGSSDEQAYIWVVSSPE--APPALLLGHTREVTTVRWLPSATTPVATCSDDFRV 385 (720)
T ss_pred hhhccCcccceeeeeeecCCCCceEeccCCCcceeeeeecCcc--CChhhhhCcceEEEEEeeccccCCCceeeccCcce
Confidence 11111211 11112223456688999999999999988654 34567789999999999998876679999999999
Q ss_pred EEEEcCCCcc--------------ceeecCCCCeEEEEeec-CCCEEEEccCCceEEEeecc
Q 036314 298 MLWDLRTAWP--------------LSVIDSHKDKVLCADWW-RGDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 298 ~lwd~~~~~~--------------~~~~~~h~~~v~~~~~~-~~~~l~s~s~D~~v~vw~~~ 344 (347)
+||++..+.. ...+.+|.-.+..+.|+ .+.+.... -+..++|+.+
T Consensus 386 kiW~l~~~l~e~~~adk~s~v~~~~~rfk~~~p~~~nv~ss~~~t~~~pR--~~~~r~~ssP 445 (720)
T KOG0321|consen 386 KIWRLSNGLEEIYAADKDSIVYEYSRRFKGHLPQVLNVNSSLRKTYKDPR--EGMNRISSSP 445 (720)
T ss_pred EEEeccCchhhccccccchhhhhhhhhhhccccccccccccccccccchh--hhccccccCc
Confidence 9999976422 22356777777777775 22222222 4556666655
No 129
>KOG1539 consensus WD repeat protein [General function prediction only]
Probab=99.92 E-value=1e-22 Score=186.59 Aligned_cols=291 Identities=19% Similarity=0.254 Sum_probs=217.1
Q ss_pred CcC-CceeeccCC-CCC-EEEEEecCCeEEEEcCCCeEE--EEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEe
Q 036314 22 LHD-DWVSAVDGS-NPG-FILTGCYDNLGRVWKAGGVCT--HILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWK 96 (347)
Q Consensus 22 ~h~-~~v~~~~~~-~~~-~l~sg~~d~~i~iw~~~~~~~--~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd 96 (347)
-|. +.|++++|. +|. .+|+|+..|.+-+||+.+..+ .....|.+.|..+.|.+.. ..++|++.|+.+++|=
T Consensus 241 k~d~g~VtslSFrtDG~p~las~~~~G~m~~wDLe~kkl~~v~~nah~~sv~~~~fl~~e----pVl~ta~~DnSlk~~v 316 (910)
T KOG1539|consen 241 KQDWGRVTSLSFRTDGNPLLASGRSNGDMAFWDLEKKKLINVTRNAHYGSVTGATFLPGE----PVLVTAGADNSLKVWV 316 (910)
T ss_pred EccccceeEEEeccCCCeeEEeccCCceEEEEEcCCCeeeeeeeccccCCcccceecCCC----ceEeeccCCCceeEEE
Confidence 365 899999998 554 788999999999999976443 2345888888888887733 2678888888888885
Q ss_pred cccccc----cc----------------------------------------------C------------c--c--ccc
Q 036314 97 FDAEEL----VN----------------------------------------------H------------P--K--KIR 110 (347)
Q Consensus 97 ~~~~~~----~~----------------------------------------------~------------~--~--~~~ 110 (347)
.+++.. ++ . . . +..
T Consensus 317 fD~~dg~pR~LR~R~GHs~Pp~~irfy~~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p 396 (910)
T KOG1539|consen 317 FDSGDGVPRLLRSRGGHSAPPSCIRFYGSQGHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLP 396 (910)
T ss_pred eeCCCCcchheeeccCCCCCchheeeeccCcEEEEecccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCC
Confidence 542211 00 0 0 0 000
Q ss_pred ee--------------------------------------eeee-----ccccceEEEEEeCCCCEEEEeeCCCcEEEEe
Q 036314 111 SF--------------------------------------KILR-----GHKASVHSIAAETSGNMVCSGSWDCTISLWR 147 (347)
Q Consensus 111 ~~--------------------------------------~~~~-----~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd 147 (347)
++ .+|. .-...+++++.++-|++.+-|...|+|-+|+
T Consensus 397 ~i~~fa~~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id~fN 476 (910)
T KOG1539|consen 397 PIVEFAFENAREKEWDNVITAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFCGNFVFIGYSKGTIDRFN 476 (910)
T ss_pred cceeeecccchhhhhcceeEEecCcceEEEEeccCcccccEEecCccccccCcceEEEEEeccCceEEEeccCCeEEEEE
Confidence 00 0111 1236788999999999999999999999999
Q ss_pred cCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeC-CCCeEEEEecCCcEEEEECCCCceeeeeeeC
Q 036314 148 TNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP-QQETIYSASWDHSVRTWDVEMGKDLSDIFCG 226 (347)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~ 226 (347)
+.++-..++ ...-..|..+|.+++.. -++.++|++.+|.++.||......+..+..+
T Consensus 477 mQSGi~r~s----------------------f~~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l~l~ 534 (910)
T KOG1539|consen 477 MQSGIHRKS----------------------FGDSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLKKSLRLG 534 (910)
T ss_pred cccCeeecc----------------------cccCccccCceeEEEecCCCceEEEccCcceEEEEecCCcceeeeeccC
Confidence 986522110 00114588999999974 4567999999999999999888777777766
Q ss_pred eeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCc
Q 036314 227 KALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAW 306 (347)
Q Consensus 227 ~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~ 306 (347)
..+.++..+... .++|.+..|-.|+++|... .+....|.||.+.|+++.|||||.+ |++++.|++||+||+-++.
T Consensus 535 ~~~~~iv~hr~s-~l~a~~~ddf~I~vvD~~t---~kvvR~f~gh~nritd~~FS~DgrW-lisasmD~tIr~wDlpt~~ 609 (910)
T KOG1539|consen 535 SSITGIVYHRVS-DLLAIALDDFSIRVVDVVT---RKVVREFWGHGNRITDMTFSPDGRW-LISASMDSTIRTWDLPTGT 609 (910)
T ss_pred CCcceeeeeehh-hhhhhhcCceeEEEEEchh---hhhhHHhhccccceeeeEeCCCCcE-EEEeecCCcEEEEeccCcc
Confidence 666666665433 3677888899999999863 2346788899999999999999965 9999999999999999988
Q ss_pred cceeecCCCCeEEEEeecC-CCEEEEccCC-ceEEEeecc
Q 036314 307 PLSVIDSHKDKVLCADWWR-GDSVISGGVD-SKLCVSSGV 344 (347)
Q Consensus 307 ~~~~~~~h~~~v~~~~~~~-~~~l~s~s~D-~~v~vw~~~ 344 (347)
.+-.+. -..++..+.|+| |++||++..| .-|++|+--
T Consensus 610 lID~~~-vd~~~~sls~SPngD~LAT~Hvd~~gIylWsNk 648 (910)
T KOG1539|consen 610 LIDGLL-VDSPCTSLSFSPNGDFLATVHVDQNGIYLWSNK 648 (910)
T ss_pred eeeeEe-cCCcceeeEECCCCCEEEEEEecCceEEEEEch
Confidence 776553 356889999986 8899999988 779999754
No 130
>KOG2445 consensus Nuclear pore complex component (sc Seh1) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.92 E-value=2.3e-22 Score=165.10 Aligned_cols=286 Identities=20% Similarity=0.255 Sum_probs=197.0
Q ss_pred CCCCcCCceeeccCC-CCCEEEEEecCCeEEEEcCC---C--eEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcE
Q 036314 19 EPSLHDDWVSAVDGS-NPGFILTGCYDNLGRVWKAG---G--VCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTL 92 (347)
Q Consensus 19 ~~~~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~---~--~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v 92 (347)
+..+|.+-|.++.|. .|..+||+|.|++++|||.. + .+....+.|.+.|..|.|.+.. =++.+|++|.|+++
T Consensus 8 i~s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPE--fGqvvA~cS~Drtv 85 (361)
T KOG2445|consen 8 IDSGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPE--FGQVVATCSYDRTV 85 (361)
T ss_pred cccCCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCcc--ccceEEEEecCCce
Confidence 356899999999987 58899999999999999952 3 4677899999999999996533 23589999999999
Q ss_pred EEEeccccccccCccccceeeeeeccccceEEEEEeCC--CCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccc
Q 036314 93 RLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETS--GNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVE 170 (347)
Q Consensus 93 ~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~--~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~ 170 (347)
+||.=.....-.+...+....++......|++|.|.|. |..+++++.||++|||+..+.-...
T Consensus 86 ~iWEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs--------------- 150 (361)
T KOG2445|consen 86 SIWEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLS--------------- 150 (361)
T ss_pred eeeeecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccc---------------
Confidence 99985322222222345566678888899999999886 6789999999999999876542110
Q ss_pred ccccccc---ccccccCCccceEEEEeCC----CCeEEEEecC-----CcEEEEECCCCc-e---eeeee-eCeeeEEEE
Q 036314 171 EPQLEGE---AISTLVGHTQCVSSVVWPQ----QETIYSASWD-----HSVRTWDVEMGK-D---LSDIF-CGKALNCID 233 (347)
Q Consensus 171 ~~~~~~~---~~~~~~~h~~~v~~~~~~~----~~~l~s~s~d-----g~v~vwd~~~~~-~---~~~~~-~~~~~~~~~ 233 (347)
..++..+ .+.....+.....|+.|.. .++|+.|+.+ +.++||....+. . +.++. ...++..++
T Consensus 151 ~W~Lq~Ei~~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~ 230 (361)
T KOG2445|consen 151 QWTLQHEIQNVIDPPGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDIS 230 (361)
T ss_pred cchhhhhhhhccCCcccccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeee
Confidence 0000000 0011122445567788853 2456666555 379999765432 2 22232 245789999
Q ss_pred eeCCCC---cEEEEecCCCcEEEEeCCCC------------C-----CCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeC
Q 036314 234 IGGEGS---ALIAAGGSDPILRIWDPRKP------------G-----TSAPVFQFSSHNSWISACKWHNKSWFHLISASY 293 (347)
Q Consensus 234 ~~~~~~---~~la~~~~d~~i~iwd~~~~------------~-----~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~ 293 (347)
|.|+-+ .+||+++.|| |+||.++.. . +...+..+.+|.+.|..+.|+-.| ..|+|.+.
T Consensus 231 wAPn~Gr~y~~lAvA~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtG-tiLsStGd 308 (361)
T KOG2445|consen 231 WAPNIGRSYHLLAVATKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTG-TILSSTGD 308 (361)
T ss_pred eccccCCceeeEEEeecCc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeee-eEEeecCC
Confidence 987643 4789999999 999997620 0 011234578999999999999877 57999999
Q ss_pred CCcEEEEEcCCC---ccceeecCCCCeEEEEeec
Q 036314 294 DGKVMLWDLRTA---WPLSVIDSHKDKVLCADWW 324 (347)
Q Consensus 294 D~~i~lwd~~~~---~~~~~~~~h~~~v~~~~~~ 324 (347)
||.||+|...-. ++...+.+ ++.|....|+
T Consensus 309 DG~VRLWkany~n~~kC~sv~~~-e~~~~~~~~~ 341 (361)
T KOG2445|consen 309 DGCVRLWKANYNNLWKCTSVLKA-EGSVTKPDFS 341 (361)
T ss_pred CceeeehhhhhhhhheeeeEEec-cCCCCCcccc
Confidence 999999976532 34444543 2334444443
No 131
>KOG1445 consensus Tumor-specific antigen (contains WD repeats) [Cytoskeleton]
Probab=99.92 E-value=1.7e-23 Score=186.44 Aligned_cols=103 Identities=25% Similarity=0.372 Sum_probs=89.5
Q ss_pred EEEEecCCCcEEEEeCCCCCC----CCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCC
Q 036314 241 LIAAGGSDPILRIWDPRKPGT----SAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKD 316 (347)
Q Consensus 241 ~la~~~~d~~i~iwd~~~~~~----~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~ 316 (347)
.+|.+++||.|+||.+...+- ..+...+..|...|.++.|+|-....|+++++|-+|+|||++++.....+.+|++
T Consensus 642 rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~~~~~l~gHtd 721 (1012)
T KOG1445|consen 642 RLAVATDDGQINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDLANAKLYSRLVGHTD 721 (1012)
T ss_pred HeeecccCceEEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhhccceeeeeehhhhhhhheeccCcC
Confidence 478899999999998764332 2345677899999999999997767899999999999999999888888999999
Q ss_pred eEEEEeecC-CCEEEEccCCceEEEeec
Q 036314 317 KVLCADWWR-GDSVISGGVDSKLCVSSG 343 (347)
Q Consensus 317 ~v~~~~~~~-~~~l~s~s~D~~v~vw~~ 343 (347)
.|.+++||| |+++|+.+.||+|+|+.-
T Consensus 722 qIf~~AWSpdGr~~AtVcKDg~~rVy~P 749 (1012)
T KOG1445|consen 722 QIFGIAWSPDGRRIATVCKDGTLRVYEP 749 (1012)
T ss_pred ceeEEEECCCCcceeeeecCceEEEeCC
Confidence 999999985 888999999999999864
No 132
>KOG0270 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.92 E-value=4.3e-23 Score=176.87 Aligned_cols=237 Identities=18% Similarity=0.336 Sum_probs=176.8
Q ss_pred CCEEEEEecCCeEEEEcCC--C---eEE-----------------EEeeccCCceEEEEEeecCCCceEEEEEccCCCcE
Q 036314 35 PGFILTGCYDNLGRVWKAG--G---VCT-----------------HILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTL 92 (347)
Q Consensus 35 ~~~l~sg~~d~~i~iw~~~--~---~~~-----------------~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v 92 (347)
|+|+|-|..|..|.|||+. . .+. ....+|++.|.++.|.... ...|||||.|.+|
T Consensus 192 gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~---~nVLaSgsaD~TV 268 (463)
T KOG0270|consen 192 GNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNF---RNVLASGSADKTV 268 (463)
T ss_pred cceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhcccc---ceeEEecCCCceE
Confidence 5699999999999999862 1 111 0123799999999886543 2479999999999
Q ss_pred EEEeccccccccCccccceeeeeeccccceEEEEEeCCC-CEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccc
Q 036314 93 RLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSG-NMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEE 171 (347)
Q Consensus 93 ~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~-~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 171 (347)
++||+.+++ +..++..|.+.|.++.|+|.. ..|++||+|++|++.|++.....+...
T Consensus 269 ~lWD~~~g~---------p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~w------------- 326 (463)
T KOG0270|consen 269 KLWDVDTGK---------PKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEW------------- 326 (463)
T ss_pred EEEEcCCCC---------cceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceE-------------
Confidence 999999876 445677899999999998865 789999999999999998643221111
Q ss_pred ccccccccccccCCccceEEEEeC--CCCeEEEEecCCcEEEEECCCC-ceeeeeee-CeeeEEEEeeCCCCcEEEEecC
Q 036314 172 PQLEGEAISTLVGHTQCVSSVVWP--QQETIYSASWDHSVRTWDVEMG-KDLSDIFC-GKALNCIDIGGEGSALIAAGGS 247 (347)
Q Consensus 172 ~~~~~~~~~~~~~h~~~v~~~~~~--~~~~l~s~s~dg~v~vwd~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~la~~~~ 247 (347)
. ..+.|-.++|. ....++++..||+|+-+|+|.. +++.++.. ..++.++++......++++++.
T Consensus 327 ---------k---~~g~VEkv~w~~~se~~f~~~tddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~ 394 (463)
T KOG0270|consen 327 ---------K---FDGEVEKVAWDPHSENSFFVSTDDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQTPGLLSTAST 394 (463)
T ss_pred ---------E---eccceEEEEecCCCceeEEEecCCceEEeeecCCCCCceeEEEeccCCcceEEecCCCCcceeeccc
Confidence 0 12356777874 2345788899999999999875 66666654 4578999988777789999999
Q ss_pred CCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccce
Q 036314 248 DPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLS 309 (347)
Q Consensus 248 d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~ 309 (347)
|+.|++|++.... +.......-.-+...|.++.|+....||.|+..+.++|||+.+..++.
T Consensus 395 d~~Vklw~~~~~~-~~~v~~~~~~~~rl~c~~~~~~~a~~la~GG~k~~~~vwd~~~~~~V~ 455 (463)
T KOG0270|consen 395 DKVVKLWKFDVDS-PKSVKEHSFKLGRLHCFALDPDVAFTLAFGGEKAVLRVWDIFTNSPVR 455 (463)
T ss_pred cceEEEEeecCCC-CcccccccccccceeecccCCCcceEEEecCccceEEEeecccChhHH
Confidence 9999999986432 222211111123467788889988889999999999999998875543
No 133
>KOG0267 consensus Microtubule severing protein katanin p80 subunit B (contains WD40 repeats) [Cell cycle control, cell division, chromosome partitioning]
Probab=99.92 E-value=5.4e-25 Score=198.54 Aligned_cols=233 Identities=21% Similarity=0.346 Sum_probs=188.8
Q ss_pred CCCCCcCCceeeccCC-CCCEEEEEecCCeEEEEcCCC-eEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEE
Q 036314 18 EEPSLHDDWVSAVDGS-NPGFILTGCYDNLGRVWKAGG-VCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLW 95 (347)
Q Consensus 18 ~~~~~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~~-~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~w 95 (347)
.....|...|.++..- ....+++||.|..+-+|.... .+...|.+|+..|-++.|.+.. ..|++|+.||+||+|
T Consensus 22 ~~~~~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~kp~~i~S~~~hespIeSl~f~~~E----~LlaagsasgtiK~w 97 (825)
T KOG0267|consen 22 REFVAHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGKPNAITSLTGHESPIESLTFDTSE----RLLAAGSASGTIKVW 97 (825)
T ss_pred hhhhhhhhhhceeeeeccceeeccCCCceeeccccccCCchhheeeccCCcceeeecCcch----hhhcccccCCceeee
Confidence 3566789999988864 467899999999999998643 3455699999999999998844 468999999999999
Q ss_pred eccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccc
Q 036314 96 KFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLE 175 (347)
Q Consensus 96 d~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (347)
|++.++ .+++|.+|...+.+|.|+|.+.++++|+.|+.+++||+...
T Consensus 98 DleeAk---------~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~------------------------ 144 (825)
T KOG0267|consen 98 DLEEAK---------IVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKK------------------------ 144 (825)
T ss_pred ehhhhh---------hhhhhhccccCcceeeeccceEEeccccccccceehhhhcc------------------------
Confidence 998654 34578999999999999999999999999999999998743
Q ss_pred ccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeeee-CeeeEEEEeeCCCCcEEEEecCCCcEEE
Q 036314 176 GEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFC-GKALNCIDIGGEGSALIAAGGSDPILRI 253 (347)
Q Consensus 176 ~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~la~~~~d~~i~i 253 (347)
.+...+.+|...|..+.| |+|.++++++.|.+++|||+..|+....+.. ...+..+.++|. ..++++|+.|.++++
T Consensus 145 -Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~~ef~~~e~~v~sle~hp~-e~Lla~Gs~d~tv~f 222 (825)
T KOG0267|consen 145 -GCSHTYKSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKLSKEFKSHEGKVQSLEFHPL-EVLLAPGSSDRTVRF 222 (825)
T ss_pred -CceeeecCCcceeEEEeecCCCceeeccCCcceeeeecccccccccccccccccccccccCch-hhhhccCCCCceeee
Confidence 245677889999999988 6788999999999999999999988777763 345677788664 457899999999999
Q ss_pred EeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeC
Q 036314 254 WDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASY 293 (347)
Q Consensus 254 wd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~ 293 (347)
||++.- ..+-........|.+.+|+|++.. +++|..
T Consensus 223 ~dletf---e~I~s~~~~~~~v~~~~fn~~~~~-~~~G~q 258 (825)
T KOG0267|consen 223 WDLETF---EVISSGKPETDGVRSLAFNPDGKI-VLSGEQ 258 (825)
T ss_pred ecccee---EEeeccCCccCCceeeeecCCcee-eecCch
Confidence 999732 223344445667999999999853 555543
No 134
>KOG0650 consensus WD40 repeat nucleolar protein Bop1, involved in ribosome biogenesis [Translation, ribosomal structure and biogenesis]
Probab=99.91 E-value=3e-22 Score=177.51 Aligned_cols=298 Identities=18% Similarity=0.275 Sum_probs=205.1
Q ss_pred ccCCCCcCC---CCCcCCceeeccCC-CCCEEEEEecCCeEEEEcC-CCeEEEEeeccCCceEEEEEeecCCCceEEEEE
Q 036314 11 AVAPQKEEE---PSLHDDWVSAVDGS-NPGFILTGCYDNLGRVWKA-GGVCTHILEGHCGAVSSVNIIKSDGLKYVTVAT 85 (347)
Q Consensus 11 ~~~~~~~~~---~~~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~-~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s 85 (347)
++.|+-+.. -.||++.|+++... .|..||+||.||++|||.+ +|.|++++.-- +.|.+|+|.|.... ..||.
T Consensus 384 dLrPFPt~~~lvyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~~d-~~I~~vaw~P~~~~--~vLAv 460 (733)
T KOG0650|consen 384 DLRPFPTRCALVYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQFD-SEIRSVAWNPLSDL--CVLAV 460 (733)
T ss_pred hcCCCcceeeeeEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEeec-ceeEEEEecCCCCc--eeEEE
Confidence 344444443 34899999999866 5679999999999999996 57888765422 35999999986543 33444
Q ss_pred ccCCCcEEEEeccccc---------cccCc----c---------------ccceeeeeeccccceEEEEEeCCCCEEEEe
Q 036314 86 ASKDQTLRLWKFDAEE---------LVNHP----K---------------KIRSFKILRGHKASVHSIAAETSGNMVCSG 137 (347)
Q Consensus 86 ~s~Dg~v~~wd~~~~~---------~~~~~----~---------------~~~~~~~~~~h~~~V~~v~~s~~~~~l~sg 137 (347)
+-. ..+-+-+..-++ +.... . ..+-++..-.|..+|+.+.|+..|.+|++.
T Consensus 461 A~~-~~~~ivnp~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV 539 (733)
T KOG0650|consen 461 AVG-ECVLIVNPIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATV 539 (733)
T ss_pred Eec-CceEEeCccccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEe
Confidence 433 345555532221 11000 0 001112334588999999999999999987
Q ss_pred eCC---CcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeC-CCCeEEEEecCCcEEEEE
Q 036314 138 SWD---CTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP-QQETIYSASWDHSVRTWD 213 (347)
Q Consensus 138 s~D---g~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~l~s~s~dg~v~vwd 213 (347)
.-| ..|.|..+...... ...+. -.+.+..+.|. ...+|+.+ .-+.|++||
T Consensus 540 ~~~~~~~~VliHQLSK~~sQ----------------------~PF~k---skG~vq~v~FHPs~p~lfVa-Tq~~vRiYd 593 (733)
T KOG0650|consen 540 MPDSGNKSVLIHQLSKRKSQ----------------------SPFRK---SKGLVQRVKFHPSKPYLFVA-TQRSVRIYD 593 (733)
T ss_pred ccCCCcceEEEEeccccccc----------------------Cchhh---cCCceeEEEecCCCceEEEE-eccceEEEe
Confidence 554 45777766532110 01111 12235556664 44455544 466899999
Q ss_pred CCCCceeeeeeeC-eeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEe
Q 036314 214 VEMGKDLSDIFCG-KALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISAS 292 (347)
Q Consensus 214 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s 292 (347)
+.....++.+..+ .-+..+++++.+.++ +.|+.|+.+..||+.... ++.+++..|...+++|+|++.=+ ++++|+
T Consensus 594 L~kqelvKkL~tg~kwiS~msihp~GDnl-i~gs~d~k~~WfDldlss--kPyk~lr~H~~avr~Va~H~ryP-Lfas~s 669 (733)
T KOG0650|consen 594 LSKQELVKKLLTGSKWISSMSIHPNGDNL-ILGSYDKKMCWFDLDLSS--KPYKTLRLHEKAVRSVAFHKRYP-LFASGS 669 (733)
T ss_pred hhHHHHHHHHhcCCeeeeeeeecCCCCeE-EEecCCCeeEEEEcccCc--chhHHhhhhhhhhhhhhhccccc-eeeeec
Confidence 9887777766544 456788888876655 568899999999997543 45677888999999999998764 799999
Q ss_pred CCCcEEEE------EcCCC---ccceeecCCCCe----EEEEeecCCC-EEEEccCCceEEEee
Q 036314 293 YDGKVMLW------DLRTA---WPLSVIDSHKDK----VLCADWWRGD-SVISGGVDSKLCVSS 342 (347)
Q Consensus 293 ~D~~i~lw------d~~~~---~~~~~~~~h~~~----v~~~~~~~~~-~l~s~s~D~~v~vw~ 342 (347)
.||++.|+ |+-.+ .+++.+.+|.-. |+.+.|+|.+ +|.|++.||+|++|.
T Consensus 670 dDgtv~Vfhg~VY~Dl~qnpliVPlK~L~gH~~~~~~gVLd~~wHP~qpWLfsAGAd~tirlfT 733 (733)
T KOG0650|consen 670 DDGTVIVFHGMVYNDLLQNPLIVPLKRLRGHEKTNDLGVLDTIWHPRQPWLFSAGADGTIRLFT 733 (733)
T ss_pred CCCcEEEEeeeeehhhhcCCceEeeeeccCceeecccceEeecccCCCceEEecCCCceEEeeC
Confidence 99999998 33222 346788999866 8888999855 899999999999984
No 135
>KOG0642 consensus Cell-cycle nuclear protein, contains WD-40 repeats [Cell cycle control, cell division, chromosome partitioning]
Probab=99.91 E-value=3.5e-23 Score=182.29 Aligned_cols=260 Identities=21% Similarity=0.237 Sum_probs=184.5
Q ss_pred EeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEee
Q 036314 59 ILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGS 138 (347)
Q Consensus 59 ~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs 138 (347)
++..|...+.++.|.+..+ .|++++.||++++|.++.. ........+++.+|++|.++|.|+++++++..+++|+
T Consensus 289 tl~s~~d~ir~l~~~~sep----~lit~sed~~lk~WnLqk~-~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg 363 (577)
T KOG0642|consen 289 TLRSHDDCIRALAFHPSEP----VLITASEDGTLKLWNLQKA-KKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGG 363 (577)
T ss_pred eeecchhhhhhhhcCCCCC----eEEEeccccchhhhhhccc-CCccccceeeeEEEecccCceEEEEecCCceEEEeec
Confidence 5667888899999887554 5899999999999999431 1122345678889999999999999999999999999
Q ss_pred CCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeC-CCCeEEEEecCCcEEEEECCCC
Q 036314 139 WDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP-QQETIYSASWDHSVRTWDVEMG 217 (347)
Q Consensus 139 ~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~l~s~s~dg~v~vwd~~~~ 217 (347)
-||+|+.|++..... ..+..-.......+.||+++|+.++++ ...+|++++.||++++|+....
T Consensus 364 ~Dg~I~~w~~p~n~d---------------p~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~ 428 (577)
T KOG0642|consen 364 IDGTIRCWNLPPNQD---------------PDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEE 428 (577)
T ss_pred cCceeeeeccCCCCC---------------cccccCcchhccceeccccceeeeeecccccceeeecCCceEEeeccCCc
Confidence 999999998762110 011111112345788999999999985 4567999999999999997655
Q ss_pred ceeeeee---eCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecC-------CCCCeeEEEeCCCCCeE
Q 036314 218 KDLSDIF---CGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSS-------HNSWISACKWHNKSWFH 287 (347)
Q Consensus 218 ~~~~~~~---~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~-------h~~~v~~v~~s~~~~~~ 287 (347)
.. ..+. .......+++......+.++ +.....+++...........+.. -...+..+.++|..+ +
T Consensus 429 ~~-~~f~~~~e~g~Plsvd~~ss~~a~~~~---s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~-~ 503 (577)
T KOG0642|consen 429 SP-CTFGEPKEHGYPLSVDRTSSRPAHSLA---SFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTAD-I 503 (577)
T ss_pred Cc-cccCCccccCCcceEeeccchhHhhhh---hcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCC-e
Confidence 44 2221 12233455553322222222 23333333322111111111111 112466788888875 6
Q ss_pred EEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeec-CCCEEEEccCCceEEEeec
Q 036314 288 LISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWW-RGDSVISGGVDSKLCVSSG 343 (347)
Q Consensus 288 l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~-~~~~l~s~s~D~~v~vw~~ 343 (347)
..++..|+.|+++|..++.++.....|...|.++++- +|-+|++++.|+.+++|.-
T Consensus 504 ~~~~hed~~Ir~~dn~~~~~l~s~~a~~~svtslai~~ng~~l~s~s~d~sv~l~kl 560 (577)
T KOG0642|consen 504 TFTAHEDRSIRFFDNKTGKILHSMVAHKDSVTSLAIDPNGPYLMSGSHDGSVRLWKL 560 (577)
T ss_pred eEecccCCceecccccccccchheeeccceecceeecCCCceEEeecCCceeehhhc
Confidence 8999999999999999999999999999999999996 5779999999999999986
No 136
>KOG0307 consensus Vesicle coat complex COPII, subunit SEC31 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.90 E-value=2.3e-23 Score=196.90 Aligned_cols=252 Identities=15% Similarity=0.235 Sum_probs=198.5
Q ss_pred CceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCC-EEEEeeCCCcE
Q 036314 65 GAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGN-MVCSGSWDCTI 143 (347)
Q Consensus 65 ~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~-~l~sgs~Dg~I 143 (347)
...+.++|.+.+....-.||.|.+||.|-+||...- ........+.+...|+++|..+.|++.+. ++|||+.||.|
T Consensus 65 ~rF~kL~W~~~g~~~~GlIaGG~edG~I~ly~p~~~---~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI 141 (1049)
T KOG0307|consen 65 NRFNKLAWGSYGSHSHGLIAGGLEDGNIVLYDPASI---IANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEI 141 (1049)
T ss_pred ccceeeeecccCCCccceeeccccCCceEEecchhh---ccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcE
Confidence 457889998755432236899999999999997642 01122344556778999999999999875 99999999999
Q ss_pred EEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeCC--CCeEEEEecCCcEEEEECCCCceee
Q 036314 144 SLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQ--QETIYSASWDHSVRTWDVEMGKDLS 221 (347)
Q Consensus 144 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~ 221 (347)
.|||+...+..... + -....+.|.+++|.. ...|++++.+|.+.|||++..+.+.
T Consensus 142 ~iWDlnn~~tP~~~------------------~-----~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii 198 (1049)
T KOG0307|consen 142 LIWDLNKPETPFTP------------------G-----SQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPII 198 (1049)
T ss_pred EEeccCCcCCCCCC------------------C-----CCCCcccceEeccchhhhHHhhccCCCCCceeccccCCCccc
Confidence 99999864321100 0 011345788999964 4568999999999999999887776
Q ss_pred eeeeCe---eeEEEEeeCCCCcEEEEecCC---CcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCC
Q 036314 222 DIFCGK---ALNCIDIGGEGSALIAAGGSD---PILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDG 295 (347)
Q Consensus 222 ~~~~~~---~~~~~~~~~~~~~~la~~~~d---~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~ 295 (347)
.+.... .+..+.|+|++...++++++| -.|.+||+|... .+++.+.+|...|.++.|++.+..+|+|++.|+
T Consensus 199 ~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~as--sP~k~~~~H~~GilslsWc~~D~~lllSsgkD~ 276 (1049)
T KOG0307|consen 199 KLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFAS--SPLKILEGHQRGILSLSWCPQDPRLLLSSGKDN 276 (1049)
T ss_pred ccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccC--CchhhhcccccceeeeccCCCCchhhhcccCCC
Confidence 665433 366899999888777777665 489999999643 457788899999999999999988999999999
Q ss_pred cEEEEEcCCCccceeecCCCCeEEEEeecC--CCEEEEccCCceEEEeecc
Q 036314 296 KVMLWDLRTAWPLSVIDSHKDKVLCADWWR--GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 296 ~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~--~~~l~s~s~D~~v~vw~~~ 344 (347)
+|.+|+.++++.+..+-...+-+..+.|.| -..|+.++.||.|.|++.-
T Consensus 277 ~ii~wN~~tgEvl~~~p~~~nW~fdv~w~pr~P~~~A~asfdgkI~I~sl~ 327 (1049)
T KOG0307|consen 277 RIICWNPNTGEVLGELPAQGNWCFDVQWCPRNPSVMAAASFDGKISIYSLQ 327 (1049)
T ss_pred CeeEecCCCceEeeecCCCCcceeeeeecCCCcchhhhheeccceeeeeee
Confidence 999999999999998877677889999975 4479999999999998753
No 137
>KOG0302 consensus Ribosome Assembly protein [General function prediction only]
Probab=99.90 E-value=1.3e-22 Score=170.65 Aligned_cols=218 Identities=19% Similarity=0.313 Sum_probs=166.8
Q ss_pred eeccccceEEEEEeCCC--CEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEE
Q 036314 115 LRGHKASVHSIAAETSG--NMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSV 192 (347)
Q Consensus 115 ~~~h~~~V~~v~~s~~~--~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 192 (347)
..+|.+.++.+..++-+ .+.++=+..|.|+||++......-. ............++.++.+|...=+++
T Consensus 147 ~i~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~~l~---------~~~~~~~~s~~~Pl~t~~ghk~EGy~L 217 (440)
T KOG0302|consen 147 SIPHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLNALS---------EPGLEVKDSEFRPLFTFNGHKGEGYGL 217 (440)
T ss_pred ccccccccceeeecccCCcceeeeecccCcEEEEEchhhhhhhc---------CccccccccccCceEEecccCccceee
Confidence 34688888888766654 4666678899999999864311000 000111112345677888999888999
Q ss_pred EeCC--CCeEEEEecCCcEEEEECCCCceeeee----eeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeE
Q 036314 193 VWPQ--QETIYSASWDHSVRTWDVEMGKDLSDI----FCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVF 266 (347)
Q Consensus 193 ~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~----~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~ 266 (347)
.|++ ...|+||..-+.|++|...++.....- .+...+..+.++|....+||+|+.|++|+|||+|..... +-.
T Consensus 218 dWSp~~~g~LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~-~~~ 296 (440)
T KOG0302|consen 218 DWSPIKTGRLLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKK-AAV 296 (440)
T ss_pred ecccccccccccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCcc-cee
Confidence 9965 345888888889999998887643221 133467889999988889999999999999999975333 333
Q ss_pred EecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCC---CccceeecCCCCeEEEEeecC--CCEEEEccCCceEEEe
Q 036314 267 QFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRT---AWPLSVIDSHKDKVLCADWWR--GDSVISGGVDSKLCVS 341 (347)
Q Consensus 267 ~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~---~~~~~~~~~h~~~v~~~~~~~--~~~l~s~s~D~~v~vw 341 (347)
....|.+-|+-+.|+.+-+ +||+|+.||+++|||+|. ++++++|..|+.+|+++.|+| ...|+++|.|..|.||
T Consensus 297 ~~kAh~sDVNVISWnr~~~-lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~QitiW 375 (440)
T KOG0302|consen 297 STKAHNSDVNVISWNRREP-LLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQITIW 375 (440)
T ss_pred EeeccCCceeeEEccCCcc-eeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeEEEeccccCceEEeccCCCcEEEE
Confidence 4488999999999998876 899999999999999986 467889999999999999986 5578999999999999
Q ss_pred ec
Q 036314 342 SG 343 (347)
Q Consensus 342 ~~ 343 (347)
+.
T Consensus 376 Dl 377 (440)
T KOG0302|consen 376 DL 377 (440)
T ss_pred Ee
Confidence 85
No 138
>KOG2048 consensus WD40 repeat protein [General function prediction only]
Probab=99.90 E-value=9.1e-21 Score=170.36 Aligned_cols=275 Identities=19% Similarity=0.244 Sum_probs=210.7
Q ss_pred CCceeeccCC-CCCEEEEEecCCeEEEEcCCCe--EEEEeeccC-CceEEEEEeecCCCceEEEEEccCCCcEEEEeccc
Q 036314 24 DDWVSAVDGS-NPGFILTGCYDNLGRVWKAGGV--CTHILEGHC-GAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDA 99 (347)
Q Consensus 24 ~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~~~--~~~~l~~h~-~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~ 99 (347)
...|++++++ ..+.||.+=.||.|-+|++... +...+.+++ ..|.+++|.+.+ .|.|.+.+|+|.-||+.+
T Consensus 25 Ps~I~slA~s~kS~~lAvsRt~g~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~e~~-----RLFS~g~sg~i~EwDl~~ 99 (691)
T KOG2048|consen 25 PSEIVSLAYSHKSNQLAVSRTDGNIEIWNLSNNWFLEPVIHGPEDRSIESLAWAEGG-----RLFSSGLSGSITEWDLHT 99 (691)
T ss_pred ccceEEEEEeccCCceeeeccCCcEEEEccCCCceeeEEEecCCCCceeeEEEccCC-----eEEeecCCceEEEEeccc
Confidence 4679999998 5678999999999999998643 445677776 578899998532 589999999999999987
Q ss_pred cccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccccccc
Q 036314 100 EELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAI 179 (347)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (347)
.+ +...+....++|.+++.+|.+..++.|+.||.+..+++..+.. +.-
T Consensus 100 lk---------~~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I-----------------------~~~ 147 (691)
T KOG2048|consen 100 LK---------QKYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKI-----------------------TYK 147 (691)
T ss_pred Cc---------eeEEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceE-----------------------EEE
Confidence 54 3445566788999999999999999999999777776654311 111
Q ss_pred ccccCCccceEEEEeC-CCCeEEEEecCCcEEEEECCCCceeeee--e---eCe----eeEEEEeeCCCCcEEEEecCCC
Q 036314 180 STLVGHTQCVSSVVWP-QQETIYSASWDHSVRTWDVEMGKDLSDI--F---CGK----ALNCIDIGGEGSALIAAGGSDP 249 (347)
Q Consensus 180 ~~~~~h~~~v~~~~~~-~~~~l~s~s~dg~v~vwd~~~~~~~~~~--~---~~~----~~~~~~~~~~~~~~la~~~~d~ 249 (347)
+.+.-.++.+.++.|. ++..|++|+.||.|++||+..+..++-. + ..+ .+..+.+-.+ ..+++|..-|
T Consensus 148 r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd--~tI~sgDS~G 225 (691)
T KOG2048|consen 148 RSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRD--STIASGDSAG 225 (691)
T ss_pred eecccccceEEEEEecCCccEEEecccCceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEeec--CcEEEecCCc
Confidence 2334456788999995 5666999999999999999988776511 1 111 3455555443 3789999999
Q ss_pred cEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCcc----ceeecCCCCeEEEEeecC
Q 036314 250 ILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWP----LSVIDSHKDKVLCADWWR 325 (347)
Q Consensus 250 ~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~----~~~~~~h~~~v~~~~~~~ 325 (347)
+|++||.... ..+..+..|..-|.+++.++++. ++.+++.|+.|..+...++.. ......|...|++++..+
T Consensus 226 ~V~FWd~~~g---TLiqS~~~h~adVl~Lav~~~~d-~vfsaGvd~~ii~~~~~~~~~~wv~~~~r~~h~hdvrs~av~~ 301 (691)
T KOG2048|consen 226 TVTFWDSIFG---TLIQSHSCHDADVLALAVADNED-RVFSAGVDPKIIQYSLTTNKSEWVINSRRDLHAHDVRSMAVIE 301 (691)
T ss_pred eEEEEcccCc---chhhhhhhhhcceeEEEEcCCCC-eEEEccCCCceEEEEecCCccceeeeccccCCcccceeeeeec
Confidence 9999997643 23567778999999999998875 599999999999998877633 223467888999999864
Q ss_pred CCEEEEccCCceEEEee
Q 036314 326 GDSVISGGVDSKLCVSS 342 (347)
Q Consensus 326 ~~~l~s~s~D~~v~vw~ 342 (347)
. .+.+|+.|.++.+-.
T Consensus 302 ~-~l~sgG~d~~l~i~~ 317 (691)
T KOG2048|consen 302 N-ALISGGRDFTLAICS 317 (691)
T ss_pred c-eEEecceeeEEEEcc
Confidence 4 899999999987754
No 139
>KOG4283 consensus Transcription-coupled repair protein CSA, contains WD40 domain [Transcription; Replication, recombination and repair]
Probab=99.90 E-value=4.6e-21 Score=156.70 Aligned_cols=283 Identities=20% Similarity=0.270 Sum_probs=194.1
Q ss_pred CCCcCCceeeccCC--CCCEEEEEecCCeEEEEcCCC-------------eEE---EEeeccCCceEEEEEeecCCCceE
Q 036314 20 PSLHDDWVSAVDGS--NPGFILTGCYDNLGRVWKAGG-------------VCT---HILEGHCGAVSSVNIIKSDGLKYV 81 (347)
Q Consensus 20 ~~~h~~~v~~~~~~--~~~~l~sg~~d~~i~iw~~~~-------------~~~---~~l~~h~~~V~~v~~~~~~~~~~~ 81 (347)
...|.+.|+++... .++|+++|+.||.|.+||+.. .|. ..-.+|.-.|.++.|.|-+. -
T Consensus 39 ~r~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~Dt---G 115 (397)
T KOG4283|consen 39 VRPHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDT---G 115 (397)
T ss_pred eccCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecC---c
Confidence 45788999998854 578999999999999999732 121 11236778899999998543 2
Q ss_pred EEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCC---CCEEEEeeCCCcEEEEecCCCCCCCccc
Q 036314 82 TVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETS---GNMVCSGSWDCTISLWRTNDSDAAGNQV 158 (347)
Q Consensus 82 ~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~---~~~l~sgs~Dg~I~iwd~~~~~~~~~~~ 158 (347)
++.++|.|.++|+||.++.+.. ..|. -.+.|.+-+++|= -.++|+|..|-.|++-|+.++
T Consensus 116 mFtssSFDhtlKVWDtnTlQ~a---------~~F~-me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SG------- 178 (397)
T KOG4283|consen 116 MFTSSSFDHTLKVWDTNTLQEA---------VDFK-MEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASG------- 178 (397)
T ss_pred eeecccccceEEEeecccceee---------EEee-cCceeehhhcChhhhcceEEEEecCCCcEEEEeccCC-------
Confidence 6789999999999998765422 1221 2344555455442 357889999999999999864
Q ss_pred eeeeccCCCccccccccccccccccCCccceEEEEeC-CCCe-EEEEecCCcEEEEECCCC-ceeeeee-----------
Q 036314 159 SIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP-QQET-IYSASWDHSVRTWDVEMG-KDLSDIF----------- 224 (347)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~-l~s~s~dg~v~vwd~~~~-~~~~~~~----------- 224 (347)
.+..++.||.+.|.++.|+ ..++ |++|+.||.|++||++.. .+...+.
T Consensus 179 ------------------s~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~ 240 (397)
T KOG4283|consen 179 ------------------SFSHTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILK 240 (397)
T ss_pred ------------------cceeeeccccCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCcccc
Confidence 3445789999999999995 4454 799999999999999754 2222221
Q ss_pred ----eCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCe---eEEEeCCCCCeEEEEEeCCCcE
Q 036314 225 ----CGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWI---SACKWHNKSWFHLISASYDGKV 297 (347)
Q Consensus 225 ----~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v---~~v~~s~~~~~~l~s~s~D~~i 297 (347)
+...++.+++.+++ ..+++.+.|..+++|+..++......+--..|.+.+ .-+. +-+.. .++---.|+.+
T Consensus 241 ~n~ah~gkvngla~tSd~-~~l~~~gtd~r~r~wn~~~G~ntl~~~g~~~~n~~~~~~~~~~-~~~s~-vfv~~p~~~~l 317 (397)
T KOG4283|consen 241 TNTAHYGKVNGLAWTSDA-RYLASCGTDDRIRVWNMESGRNTLREFGPIIHNQTTSFAVHIQ-SMDSD-VFVLFPNDGSL 317 (397)
T ss_pred ccccccceeeeeeecccc-hhhhhccCccceEEeecccCcccccccccccccccccceEEEe-ecccc-eEEEEecCCeE
Confidence 12246678886654 467888899999999987543211111111122211 0011 11111 13333456888
Q ss_pred EEEEcCCCccceeecCCCCeEEEEeecC-CCEEEEccCCceEEEeec
Q 036314 298 MLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKLCVSSG 343 (347)
Q Consensus 298 ~lwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~D~~v~vw~~ 343 (347)
.++.+-.+..+..+.+|-..+.|..|-+ =+..-+++.|++|.-|.-
T Consensus 318 all~~~sgs~ir~l~~h~k~i~c~~~~~~fq~~~tg~~d~ni~~w~p 364 (397)
T KOG4283|consen 318 ALLNLLEGSFVRRLSTHLKRINCAAYRPDFEQCFTGDMNGNIYMWSP 364 (397)
T ss_pred EEEEccCceEEEeeecccceeeEEeecCchhhhhccccCCccccccc
Confidence 8999888888888999988888888854 335788999999998864
No 140
>KOG2055 consensus WD40 repeat protein [General function prediction only]
Probab=99.90 E-value=3.9e-21 Score=165.65 Aligned_cols=288 Identities=12% Similarity=0.192 Sum_probs=210.8
Q ss_pred CCCCCcCCceeeccCCCC-CEEEEEecCCeEEEEcCCCe---EEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEE
Q 036314 18 EEPSLHDDWVSAVDGSNP-GFILTGCYDNLGRVWKAGGV---CTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLR 93 (347)
Q Consensus 18 ~~~~~h~~~v~~~~~~~~-~~l~sg~~d~~i~iw~~~~~---~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~ 93 (347)
|....-...|+++.|.+. .+|+++|.|+++|||.+.|+ .++.+.--.-+|.+..|.|.+. ..+++++.-.-+.
T Consensus 207 Na~~ps~~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~---~~i~~s~rrky~y 283 (514)
T KOG2055|consen 207 NAAHPSHGGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGH---SVIFTSGRRKYLY 283 (514)
T ss_pred ccCCcCcCCceEEEecCCCceEEEecCCCcEEEEEecCccChhheeeeeccCccceeeecCCCc---eEEEecccceEEE
Confidence 344455688999999864 58999999999999998764 3455554556788889988543 2688999999999
Q ss_pred EEeccccccccCccccceeeeeeccc-cceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccc
Q 036314 94 LWKFDAEELVNHPKKIRSFKILRGHK-ASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEP 172 (347)
Q Consensus 94 ~wd~~~~~~~~~~~~~~~~~~~~~h~-~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (347)
.||+.+.+.. .+..+.++. ..+.....++++++|+..+..|-|.|-...+.+.
T Consensus 284 syDle~ak~~-------k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~el------------------- 337 (514)
T KOG2055|consen 284 SYDLETAKVT-------KLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKEL------------------- 337 (514)
T ss_pred Eeeccccccc-------cccCCCCcccchhheeEecCCCCeEEEcccCceEEeehhhhhhh-------------------
Confidence 9999876542 233344554 3456667899999999999999999986554321
Q ss_pred cccccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeeeeCeee--EEEEeeCCCCcEEEEecCCC
Q 036314 173 QLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKAL--NCIDIGGEGSALIAAGGSDP 249 (347)
Q Consensus 173 ~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~la~~~~d~ 249 (347)
+.+++ -.+.|..+.| ++++.|+.++.+|.|.+||++...+++.+.....+ +.++.+ .++.++|+|+..|
T Consensus 338 ------i~s~K-ieG~v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~~~~~rf~D~G~v~gts~~~S-~ng~ylA~GS~~G 409 (514)
T KOG2055|consen 338 ------ITSFK-IEGVVSDFTFSSDSKELLASGGTGEVYVWNLRQNSCLHRFVDDGSVHGTSLCIS-LNGSYLATGSDSG 409 (514)
T ss_pred ------hheee-eccEEeeEEEecCCcEEEEEcCCceEEEEecCCcceEEEEeecCccceeeeeec-CCCceEEeccCcc
Confidence 22222 2345777777 57888988899999999999999888877655444 334443 3456999999999
Q ss_pred cEEEEeCCC---CCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEe--CCCcEEEEEcCCCccceee---cCCCCeEEEE
Q 036314 250 ILRIWDPRK---PGTSAPVFQFSSHNSWISACKWHNKSWFHLISAS--YDGKVMLWDLRTAWPLSVI---DSHKDKVLCA 321 (347)
Q Consensus 250 ~i~iwd~~~---~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s--~D~~i~lwd~~~~~~~~~~---~~h~~~v~~~ 321 (347)
.|.|||... ...++|++++..-...|+++.|+|+.. +||-+| .+..+||--+-.......| ...-+.|+||
T Consensus 410 iVNIYd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~q-iLAiaS~~~knalrLVHvPS~TVFsNfP~~n~~vg~vtc~ 488 (514)
T KOG2055|consen 410 IVNIYDGNSCFASTNPKPIKTVDNLTTAITSLQFNHDAQ-ILAIASRVKKNALRLVHVPSCTVFSNFPTSNTKVGHVTCM 488 (514)
T ss_pred eEEEeccchhhccCCCCchhhhhhhheeeeeeeeCcchh-hhhhhhhccccceEEEeccceeeeccCCCCCCcccceEEE
Confidence 999999542 345677888887888899999999985 566666 4667887665432111111 2234679999
Q ss_pred eecC-CCEEEEccCCceEEEeec
Q 036314 322 DWWR-GDSVISGGVDSKLCVSSG 343 (347)
Q Consensus 322 ~~~~-~~~l~s~s~D~~v~vw~~ 343 (347)
+|+| +.+||.|..+|.|.+|..
T Consensus 489 aFSP~sG~lAvGNe~grv~l~kL 511 (514)
T KOG2055|consen 489 AFSPNSGYLAVGNEAGRVHLFKL 511 (514)
T ss_pred EecCCCceEEeecCCCceeeEee
Confidence 9998 779999999999999964
No 141
>KOG2106 consensus Uncharacterized conserved protein, contains HELP and WD40 domains [Function unknown]
Probab=99.89 E-value=3.8e-20 Score=161.27 Aligned_cols=285 Identities=20% Similarity=0.264 Sum_probs=200.2
Q ss_pred CCceeeccCCCCCEEEEEecCCeEEEEcCCC-eEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEecccccc
Q 036314 24 DDWVSAVDGSNPGFILTGCYDNLGRVWKAGG-VCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEEL 102 (347)
Q Consensus 24 ~~~v~~~~~~~~~~l~sg~~d~~i~iw~~~~-~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~ 102 (347)
+..|.++.|..++-++||..+|.|.||+..+ ...+....|.+.|.++....++ .|+||+.|..|..||-.-.+.
T Consensus 246 kk~Vl~v~F~engdviTgDS~G~i~Iw~~~~~~~~k~~~aH~ggv~~L~~lr~G-----tllSGgKDRki~~Wd~~y~k~ 320 (626)
T KOG2106|consen 246 KKFVLCVTFLENGDVITGDSGGNILIWSKGTNRISKQVHAHDGGVFSLCMLRDG-----TLLSGGKDRKIILWDDNYRKL 320 (626)
T ss_pred ceEEEEEEEcCCCCEEeecCCceEEEEeCCCceEEeEeeecCCceEEEEEecCc-----cEeecCccceEEecccccccc
Confidence 3789999999777899999999999999754 3444445999999999887743 478899999999999221111
Q ss_pred --ccCc---cccce--------------------------eeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCC
Q 036314 103 --VNHP---KKIRS--------------------------FKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDS 151 (347)
Q Consensus 103 --~~~~---~~~~~--------------------------~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~ 151 (347)
...| ...+. ..+..+|.+....++.+|+.+++++++.|+.+++|+ +.
T Consensus 321 r~~elPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~--~~ 398 (626)
T KOG2106|consen 321 RETELPEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLTVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWN--DH 398 (626)
T ss_pred ccccCchhcCCeeEEecCCCcEEEeeccceEEEeeecCCceEEEEecccceeeEEcCCChhheeeccCcceEEEcc--CC
Confidence 0001 01100 113468999999999999999999999999999998 21
Q ss_pred CCCCccceeeeccCCCccccccccccccccccCCccceEEEEeCCCCeEEEEecCCcEEEEECCCCceeeeeeeCeeeEE
Q 036314 152 DAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNC 231 (347)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~ 231 (347)
... . + +--..+..++.|.+...++.|...|..-+.|.++...+..-...+++++
T Consensus 399 k~~-----w--------------------t-~~~~d~~~~~~fhpsg~va~Gt~~G~w~V~d~e~~~lv~~~~d~~~ls~ 452 (626)
T KOG2106|consen 399 KLE-----W--------------------T-KIIEDPAECADFHPSGVVAVGTATGRWFVLDTETQDLVTIHTDNEQLSV 452 (626)
T ss_pred cee-----E--------------------E-EEecCceeEeeccCcceEEEeeccceEEEEecccceeEEEEecCCceEE
Confidence 110 0 0 0012355677775444999999999999999988544433334678899
Q ss_pred EEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEE-----------
Q 036314 232 IDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLW----------- 300 (347)
Q Consensus 232 ~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lw----------- 300 (347)
+.++|+ +.++|.|+.|+.|+||.+...+... ...-..|.++|..+.|++|+.+ |.+-|.|-.|..|
T Consensus 453 v~ysp~-G~~lAvgs~d~~iyiy~Vs~~g~~y-~r~~k~~gs~ithLDwS~Ds~~-~~~~S~d~eiLyW~~~~~~~~ts~ 529 (626)
T KOG2106|consen 453 VRYSPD-GAFLAVGSHDNHIYIYRVSANGRKY-SRVGKCSGSPITHLDWSSDSQF-LVSNSGDYEILYWKPSECKQITSV 529 (626)
T ss_pred EEEcCC-CCEEEEecCCCeEEEEEECCCCcEE-EEeeeecCceeEEeeecCCCce-EEeccCceEEEEEccccCccccee
Confidence 999765 5789999999999999887544321 1122234478888999988743 5555555555555
Q ss_pred -------------------------------------------------EcCC---CccceeecCCCCeEEEEeec-CCC
Q 036314 301 -------------------------------------------------DLRT---AWPLSVIDSHKDKVLCADWW-RGD 327 (347)
Q Consensus 301 -------------------------------------------------d~~~---~~~~~~~~~h~~~v~~~~~~-~~~ 327 (347)
..-- ..+-..+.+|...|.+|+|. .+.
T Consensus 530 kDvkW~t~~c~lGF~v~g~s~~t~i~a~~rs~~~~~lA~gdd~g~v~lf~yPc~s~rA~~he~~ghs~~vt~V~Fl~~d~ 609 (626)
T KOG2106|consen 530 KDVKWATYTCTLGFEVFGGSDGTDINAVARSHCEKLLASGDDFGKVHLFSYPCSSPRAPSHEYGGHSSHVTNVAFLCKDS 609 (626)
T ss_pred cceeeeeeEEEEEEEEecccCCchHHHhhhhhhhhhhhccccCceEEEEccccCCCcccceeeccccceeEEEEEeeCCc
Confidence 3210 01123456899999999996 566
Q ss_pred EEEEccCCceEEEeecc
Q 036314 328 SVISGGVDSKLCVSSGV 344 (347)
Q Consensus 328 ~l~s~s~D~~v~vw~~~ 344 (347)
.|++.+.|..|..|+.+
T Consensus 610 ~li~tg~D~Si~qW~lv 626 (626)
T KOG2106|consen 610 HLISTGKDTSIMQWRLV 626 (626)
T ss_pred eEEecCCCceEEEEEeC
Confidence 77777899999999853
No 142
>KOG1539 consensus WD repeat protein [General function prediction only]
Probab=99.89 E-value=8.7e-21 Score=174.04 Aligned_cols=308 Identities=13% Similarity=0.183 Sum_probs=204.6
Q ss_pred CCCcCCceeeccCCCC-CEEEEEecCCeEEEEcCC-CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEec
Q 036314 20 PSLHDDWVSAVDGSNP-GFILTGCYDNLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKF 97 (347)
Q Consensus 20 ~~~h~~~v~~~~~~~~-~~l~sg~~d~~i~iw~~~-~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~ 97 (347)
..++...|+++..++- +.+|-|..+|+|.|+|+. ++.+..|+..-+.|++++|..++.. .|++|+..|.+.+||+
T Consensus 198 f~~~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~dkil~sFk~d~g~VtslSFrtDG~p---~las~~~~G~m~~wDL 274 (910)
T KOG1539|consen 198 FQEFFSRITAIEQSPALDVVAIGLENGTVIIFNLKFDKILMSFKQDWGRVTSLSFRTDGNP---LLASGRSNGDMAFWDL 274 (910)
T ss_pred ecccccceeEeccCCcceEEEEeccCceEEEEEcccCcEEEEEEccccceeEEEeccCCCe---eEEeccCCceEEEEEc
Confidence 3467788999987753 689999999999999986 6677778765799999999876553 7899999999999999
Q ss_pred cccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccc-cccc--
Q 036314 98 DAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVE-EPQL-- 174 (347)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~-- 174 (347)
+..++. ..+...|.+.|....|-+....+++++.|...++|-.++++-..+. ...+.+...+. .-.+
T Consensus 275 e~kkl~--------~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~~vfD~~dg~pR~--LR~R~GHs~Pp~~irfy~ 344 (910)
T KOG1539|consen 275 EKKKLI--------NVTRNAHYGSVTGATFLPGEPVLVTAGADNSLKVWVFDSGDGVPRL--LRSRGGHSAPPSCIRFYG 344 (910)
T ss_pred CCCeee--------eeeeccccCCcccceecCCCceEeeccCCCceeEEEeeCCCCcchh--eeeccCCCCCchheeeec
Confidence 865432 1234479899999999999999999999999999955433221111 11111111000 0000
Q ss_pred -----------cc---------cccccccCC--c-----------------cceEEEEeCC------CCeEEEEecCCcE
Q 036314 175 -----------EG---------EAISTLVGH--T-----------------QCVSSVVWPQ------QETIYSASWDHSV 209 (347)
Q Consensus 175 -----------~~---------~~~~~~~~h--~-----------------~~v~~~~~~~------~~~l~s~s~dg~v 209 (347)
++ .....-.++ . .+|..+++.. .+.++..-.+..+
T Consensus 345 ~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~W~Nv~~~h~~~~~~ 424 (910)
T KOG1539|consen 345 SQGHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAFENAREKEWDNVITAHKGKRSA 424 (910)
T ss_pred cCcEEEEecccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCcceeeecccchhhhhcceeEEecCcceE
Confidence 00 000000011 0 1233333321 1223333334456
Q ss_pred EEEECCCCcee-eeeeeC------eeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEe---cCCCCCeeEEE
Q 036314 210 RTWDVEMGKDL-SDIFCG------KALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQF---SSHNSWISACK 279 (347)
Q Consensus 210 ~vwd~~~~~~~-~~~~~~------~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~---~~h~~~v~~v~ 279 (347)
+.|+.+....- ..+... ..+.+++++.- +++...|...|.|.+|++..+- ....+ ..|...|..++
T Consensus 425 ~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~C-GNF~~IG~S~G~Id~fNmQSGi---~r~sf~~~~ah~~~V~gla 500 (910)
T KOG1539|consen 425 YTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFC-GNFVFIGYSKGTIDRFNMQSGI---HRKSFGDSPAHKGEVTGLA 500 (910)
T ss_pred EEEeccCcccccEEecCccccccCcceEEEEEecc-CceEEEeccCCeEEEEEcccCe---eecccccCccccCceeEEE
Confidence 67776543321 111111 23445555444 3577788889999999997532 23344 57999999999
Q ss_pred eCCCCCeEEEEEeCCCcEEEEEcCCCcc-----------------------------------------ceeecCCCCeE
Q 036314 280 WHNKSWFHLISASYDGKVMLWDLRTAWP-----------------------------------------LSVIDSHKDKV 318 (347)
Q Consensus 280 ~s~~~~~~l~s~s~D~~i~lwd~~~~~~-----------------------------------------~~~~~~h~~~v 318 (347)
...-+ +.++|++.||.++.||..+... +..|.||.+.|
T Consensus 501 ~D~~n-~~~vsa~~~Gilkfw~f~~k~l~~~l~l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~nri 579 (910)
T KOG1539|consen 501 VDGTN-RLLVSAGADGILKFWDFKKKVLKKSLRLGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWGHGNRI 579 (910)
T ss_pred ecCCC-ceEEEccCcceEEEEecCCcceeeeeccCCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhccccce
Confidence 97766 4699999999999999876431 12356899999
Q ss_pred EEEeecC-CCEEEEccCCceEEEeeccc
Q 036314 319 LCADWWR-GDSVISGGVDSKLCVSSGVS 345 (347)
Q Consensus 319 ~~~~~~~-~~~l~s~s~D~~v~vw~~~~ 345 (347)
+.++||| |++|++++.|++|++|+.++
T Consensus 580 td~~FS~DgrWlisasmD~tIr~wDlpt 607 (910)
T KOG1539|consen 580 TDMTFSPDGRWLISASMDSTIRTWDLPT 607 (910)
T ss_pred eeeEeCCCCcEEEEeecCCcEEEEeccC
Confidence 9999985 78899999999999999885
No 143
>KOG1034 consensus Transcriptional repressor EED/ESC/FIE, required for transcriptional silencing, WD repeat superfamily [Transcription]
Probab=99.88 E-value=8.5e-22 Score=163.14 Aligned_cols=255 Identities=22% Similarity=0.365 Sum_probs=172.8
Q ss_pred CEEEEEecCCeEEEEcC-CCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeee
Q 036314 36 GFILTGCYDNLGRVWKA-GGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKI 114 (347)
Q Consensus 36 ~~l~sg~~d~~i~iw~~-~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~ 114 (347)
-++|.||.-|.||+-|. .+++...+.+|.+.|+.|.+.|... .+|+++|.|.+||+|++++..++. .+.-
T Consensus 106 p~la~~G~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~---qlvls~SkD~svRlwnI~~~~Cv~------VfGG 176 (385)
T KOG1034|consen 106 PFLAAGGYLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRP---QLVLSASKDHSVRLWNIQTDVCVA------VFGG 176 (385)
T ss_pred eeEEeecceeEEEEEecchhhhccceeccCccchhhhcCCCCC---cEEEEecCCceEEEEeccCCeEEE------Eecc
Confidence 38999999999999996 5788889999999999999999654 479999999999999998876532 2233
Q ss_pred eeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCc--ccee-eeccCCCccccccccccccccccCCccceEE
Q 036314 115 LRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGN--QVSI-KKRKGNNQVEEPQLEGEAISTLVGHTQCVSS 191 (347)
Q Consensus 115 ~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 191 (347)
+.||.+.|.++.|+++|.+|+|++.|.++++|++...+-... .... ...+...+............+-.-|..+|-|
T Consensus 177 ~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~diHrnyVDC 256 (385)
T KOG1034|consen 177 VEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFSTTDIHRNYVDC 256 (385)
T ss_pred cccccCcEEEEEEcCCCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCccccccccccccccccchHHH
Confidence 568999999999999999999999999999999974321100 0000 0000000000000000001133457777777
Q ss_pred EEeCCCCeEEEEecCCcEEEEEC-CCCceeeeeeeCe--------------eeEEE--EeeCCCCcEEEEecCCCcEEEE
Q 036314 192 VVWPQQETIYSASWDHSVRTWDV-EMGKDLSDIFCGK--------------ALNCI--DIGGEGSALIAAGGSDPILRIW 254 (347)
Q Consensus 192 ~~~~~~~~l~s~s~dg~v~vwd~-~~~~~~~~~~~~~--------------~~~~~--~~~~~~~~~la~~~~d~~i~iw 254 (347)
+.| -+++++|=|.++.|..|-. +-++.+..+..++ .+.-+ ++.+ -...||.|.+.|+|.+|
T Consensus 257 vrw-~gd~ilSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~-~~~~la~gnq~g~v~vw 334 (385)
T KOG1034|consen 257 VRW-FGDFILSKSCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDP-WQKMLALGNQSGKVYVW 334 (385)
T ss_pred HHH-HhhheeecccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecH-HHHHHhhccCCCcEEEE
Confidence 766 3478999999999999976 3333322221110 11112 2222 23467889999999999
Q ss_pred eCCCCCCCCCeEEe--cCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcC
Q 036314 255 DPRKPGTSAPVFQF--SSHNSWISACKWHNKSWFHLISASYDGKVMLWDLR 303 (347)
Q Consensus 255 d~~~~~~~~~~~~~--~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~ 303 (347)
|++..+.+. ..++ +.-...|...+|+.|+. .|+....|++|.-||..
T Consensus 335 dL~~~ep~~-~ttl~~s~~~~tVRQ~sfS~dgs-~lv~vcdd~~Vwrwdrv 383 (385)
T KOG1034|consen 335 DLDNNEPPK-CTTLTHSKSGSTVRQTSFSRDGS-ILVLVCDDGTVWRWDRV 383 (385)
T ss_pred ECCCCCCcc-CceEEeccccceeeeeeecccCc-EEEEEeCCCcEEEEEee
Confidence 998754422 2233 22345688999999986 58888899999999864
No 144
>KOG4328 consensus WD40 protein [Function unknown]
Probab=99.88 E-value=8.9e-21 Score=163.31 Aligned_cols=289 Identities=15% Similarity=0.222 Sum_probs=201.0
Q ss_pred CCCCcCCceeeccCCC--C-CEEEEEecCCeEEEEcCCC-----eEEEEeeccCCceEEEEEeecCCCceEEEEEccCCC
Q 036314 19 EPSLHDDWVSAVDGSN--P-GFILTGCYDNLGRVWKAGG-----VCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQ 90 (347)
Q Consensus 19 ~~~~h~~~v~~~~~~~--~-~~l~sg~~d~~i~iw~~~~-----~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg 90 (347)
....|...|++++|.+ . .++|+|..-|+|-+||..+ .-+..+..|.++|.++.|+|.+. .++++.|.||
T Consensus 181 v~kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~---s~i~ssSyDG 257 (498)
T KOG4328|consen 181 VAKVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANT---SQIYSSSYDG 257 (498)
T ss_pred eeEecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCCh---hheeeeccCc
Confidence 3557889999999863 3 5888999999999999842 23456889999999999999654 3688999999
Q ss_pred cEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccc
Q 036314 91 TLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVE 170 (347)
Q Consensus 91 ~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~ 170 (347)
+||+=|++.+.. +.+..+..-.....++.|+.+...++.+..=|...+||.+.+...
T Consensus 258 tiR~~D~~~~i~-------e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~---------------- 314 (498)
T KOG4328|consen 258 TIRLQDFEGNIS-------EEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSE---------------- 314 (498)
T ss_pred eeeeeeecchhh-------HHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCcc----------------
Confidence 999999987642 122222223444566778777766666666669999998765321
Q ss_pred cccccccccccccCCccceEEEEeC--CCCeEEEEecCCcEEEEECCCC--ce---eeeeeeCeeeEEEEeeCCCCcEEE
Q 036314 171 EPQLEGEAISTLVGHTQCVSSVVWP--QQETIYSASWDHSVRTWDVEMG--KD---LSDIFCGKALNCIDIGGEGSALIA 243 (347)
Q Consensus 171 ~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~l~s~s~dg~v~vwd~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~la 243 (347)
..-+.-|...|.++++. ...+|+++|.|++.+|||++.- +. +..+.+...+...-|+|.++. |+
T Consensus 315 --------~~~~~lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gt-l~ 385 (498)
T KOG4328|consen 315 --------YENLRLHKKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGT-LL 385 (498)
T ss_pred --------chhhhhhhcccceeecCCCCchheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCc-eE
Confidence 22344577789999984 3457999999999999999752 22 344455667888899888877 78
Q ss_pred EecCCCcEEEEeCC----CCCCCCCeEEecCCCCCe--eEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCC-CC
Q 036314 244 AGGSDPILRIWDPR----KPGTSAPVFQFSSHNSWI--SACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSH-KD 316 (347)
Q Consensus 244 ~~~~d~~i~iwd~~----~~~~~~~~~~~~~h~~~v--~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h-~~ 316 (347)
+.++|+.|+|||.. .......+..-..+..|+ -..+|.|+.. +++.|-.-..|-|+|-+.++.+..+-.- ..
T Consensus 386 TT~~D~~IRv~dss~~sa~~~p~~~I~Hn~~t~RwlT~fKA~W~P~~~-li~vg~~~r~IDv~~~~~~q~v~el~~P~~~ 464 (498)
T KOG4328|consen 386 TTCQDNEIRVFDSSCISAKDEPLGTIPHNNRTGRWLTPFKAAWDPDYN-LIVVGRYPRPIDVFDGNGGQMVCELHDPESS 464 (498)
T ss_pred eeccCCceEEeecccccccCCccceeeccCcccccccchhheeCCCcc-EEEEeccCcceeEEcCCCCEEeeeccCcccc
Confidence 88999999999973 211111121111222333 3457999764 6899998889999999877655554322 22
Q ss_pred eEEE-EeecC-CC-EEEEccCCceEEEeec
Q 036314 317 KVLC-ADWWR-GD-SVISGGVDSKLCVSSG 343 (347)
Q Consensus 317 ~v~~-~~~~~-~~-~l~s~s~D~~v~vw~~ 343 (347)
.|.+ ..|+| +. .+|.++.-|.|.||..
T Consensus 465 tI~~vn~~HP~~~~~~aG~~s~Gki~vft~ 494 (498)
T KOG4328|consen 465 TIPSVNEFHPMRDTLAAGGNSSGKIYVFTN 494 (498)
T ss_pred ccccceeecccccceeccCCccceEEEEec
Confidence 4544 35777 33 4555557899999864
No 145
>KOG2106 consensus Uncharacterized conserved protein, contains HELP and WD40 domains [Function unknown]
Probab=99.88 E-value=5e-19 Score=154.36 Aligned_cols=294 Identities=19% Similarity=0.281 Sum_probs=205.3
Q ss_pred cCCceeeccCC--CCCEEEEEecCCeEEEEcCCC----eEEEEeeccC-CceEEEEEeecCCCceEEEEEccCCCcEEEE
Q 036314 23 HDDWVSAVDGS--NPGFILTGCYDNLGRVWKAGG----VCTHILEGHC-GAVSSVNIIKSDGLKYVTVATASKDQTLRLW 95 (347)
Q Consensus 23 h~~~v~~~~~~--~~~~l~sg~~d~~i~iw~~~~----~~~~~l~~h~-~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~w 95 (347)
-++.|..+.|. ++++++|.| .+.+.+|+.++ +...+|..++ ..|.++.|.+++. ++||..+|+|.||
T Consensus 199 sne~v~~a~FHPtd~nliit~G-k~H~~Fw~~~~~~l~k~~~~fek~ekk~Vl~v~F~engd-----viTgDS~G~i~Iw 272 (626)
T KOG2106|consen 199 SNEVVFLATFHPTDPNLIITCG-KGHLYFWTLRGGSLVKRQGIFEKREKKFVLCVTFLENGD-----VITGDSGGNILIW 272 (626)
T ss_pred ccceEEEEEeccCCCcEEEEeC-CceEEEEEccCCceEEEeeccccccceEEEEEEEcCCCC-----EEeecCCceEEEE
Confidence 44555666665 567888876 47899999764 2234566665 5688999988553 7899999999999
Q ss_pred eccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCC--------CCccceeeeccCCC
Q 036314 96 KFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDA--------AGNQVSIKKRKGNN 167 (347)
Q Consensus 96 d~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~--------~~~~~~~~~~~~~~ 167 (347)
+..+.+. .+...+|.+.|.++..-.+|.++ ||+.|..|..||-.-... .+....+.......
T Consensus 273 ~~~~~~~---------~k~~~aH~ggv~~L~~lr~Gtll-SGgKDRki~~Wd~~y~k~r~~elPe~~G~iRtv~e~~~di 342 (626)
T KOG2106|consen 273 SKGTNRI---------SKQVHAHDGGVFSLCMLRDGTLL-SGGKDRKIILWDDNYRKLRETELPEQFGPIRTVAEGKGDI 342 (626)
T ss_pred eCCCceE---------EeEeeecCCceEEEEEecCccEe-ecCccceEEeccccccccccccCchhcCCeeEEecCCCcE
Confidence 9865542 22333899999999999998755 599999999998221100 00000000000000
Q ss_pred -------ccccccccccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCC
Q 036314 168 -------QVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGS 239 (347)
Q Consensus 168 -------~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (347)
.+....+.........+|.+..+.++. |..+++++++.|+++++|+ ..+..-+.....+..|++|+|.+
T Consensus 343 ~vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~--~~k~~wt~~~~d~~~~~~fhpsg- 419 (626)
T KOG2106|consen 343 LVGTTRNFILQGTLENGFTLTVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWN--DHKLEWTKIIEDPAECADFHPSG- 419 (626)
T ss_pred EEeeccceEEEeeecCCceEEEEecccceeeEEcCCChhheeeccCcceEEEcc--CCceeEEEEecCceeEeeccCcc-
Confidence 000011111122344678888888875 6778899999999999999 34444444456778899998765
Q ss_pred cEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCcc-ceee-cCCCCe
Q 036314 240 ALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWP-LSVI-DSHKDK 317 (347)
Q Consensus 240 ~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~-~~~~-~~h~~~ 317 (347)
.+|.|...|..-+.|.+.. .+.++.-.+..++.++|+|+|. +||.||.|+.|.||-+..+.. .... ..|...
T Consensus 420 -~va~Gt~~G~w~V~d~e~~----~lv~~~~d~~~ls~v~ysp~G~-~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~~gs~ 493 (626)
T KOG2106|consen 420 -VVAVGTATGRWFVLDTETQ----DLVTIHTDNEQLSVVRYSPDGA-FLAVGSHDNHIYIYRVSANGRKYSRVGKCSGSP 493 (626)
T ss_pred -eEEEeeccceEEEEecccc----eeEEEEecCCceEEEEEcCCCC-EEEEecCCCeEEEEEECCCCcEEEEeeeecCce
Confidence 8899999999999998752 1333333477899999999996 699999999999999876433 2222 223478
Q ss_pred EEEEeec-CCCEEEEccCCceEEEe
Q 036314 318 VLCADWW-RGDSVISGGVDSKLCVS 341 (347)
Q Consensus 318 v~~~~~~-~~~~l~s~s~D~~v~vw 341 (347)
++-++|+ ++++|.+-|.|=.|..|
T Consensus 494 ithLDwS~Ds~~~~~~S~d~eiLyW 518 (626)
T KOG2106|consen 494 ITHLDWSSDSQFLVSNSGDYEILYW 518 (626)
T ss_pred eEEeeecCCCceEEeccCceEEEEE
Confidence 9999997 57789999999999999
No 146
>KOG0646 consensus WD40 repeat protein [General function prediction only]
Probab=99.87 E-value=3.4e-20 Score=160.15 Aligned_cols=266 Identities=20% Similarity=0.306 Sum_probs=185.2
Q ss_pred EEEEecCC-eEEEEcCC-CeEEEEeecc-CCceEEEEEeecCCCceEEEEEcc-CCCcEEEEeccccccccCccccceee
Q 036314 38 ILTGCYDN-LGRVWKAG-GVCTHILEGH-CGAVSSVNIIKSDGLKYVTVATAS-KDQTLRLWKFDAEELVNHPKKIRSFK 113 (347)
Q Consensus 38 l~sg~~d~-~i~iw~~~-~~~~~~l~~h-~~~V~~v~~~~~~~~~~~~l~s~s-~Dg~v~~wd~~~~~~~~~~~~~~~~~ 113 (347)
+.+++.|. .+++||+. |.....+.+- ...-.++.... ..+++++. .-..|.+|.+....... ...
T Consensus 10 ~sssS~d~~~~~~~dl~TGt~~~~ykg~~~a~~~sl~~l~-----~~yllsaq~~rp~l~vw~i~k~~~~~------q~~ 78 (476)
T KOG0646|consen 10 CSSSSFDPINCIVWDLRTGTSLLQYKGSYLAQAASLTALN-----NEYLLSAQLKRPLLHVWEILKKDQVV------QYI 78 (476)
T ss_pred EeccCCCCcceeEEecCCCceeEEecCcccccchhhhhhc-----hhheeeecccCccccccccCchhhhh------hhc
Confidence 44556665 49999974 5544455543 21111111111 01344443 34478899886433211 011
Q ss_pred eeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEE
Q 036314 114 ILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVV 193 (347)
Q Consensus 114 ~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 193 (347)
. -.++|++++-+|+|.+++.|+--+.|++|.+.++ ..+..+.+|-..|+++.
T Consensus 79 v---~Pg~v~al~s~n~G~~l~ag~i~g~lYlWelssG-------------------------~LL~v~~aHYQ~ITcL~ 130 (476)
T KOG0646|consen 79 V---LPGPVHALASSNLGYFLLAGTISGNLYLWELSSG-------------------------ILLNVLSAHYQSITCLK 130 (476)
T ss_pred c---cccceeeeecCCCceEEEeecccCcEEEEEeccc-------------------------cHHHHHHhhccceeEEE
Confidence 1 2567999999999999999989999999998864 45677888999999999
Q ss_pred eC-CCCeEEEEecCCcEEEEECCC---------CceeeeeeeC-eeeEEEEeeCC-CCcEEEEecCCCcEEEEeCCCCCC
Q 036314 194 WP-QQETIYSASWDHSVRTWDVEM---------GKDLSDIFCG-KALNCIDIGGE-GSALIAAGGSDPILRIWDPRKPGT 261 (347)
Q Consensus 194 ~~-~~~~l~s~s~dg~v~vwd~~~---------~~~~~~~~~~-~~~~~~~~~~~-~~~~la~~~~d~~i~iwd~~~~~~ 261 (347)
|. ++..|+|+|.||.|.+|.+-+ .++.+.+..+ -+++.+.+++. -...+++++.|.++++||+... .
T Consensus 131 fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g-~ 209 (476)
T KOG0646|consen 131 FSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLG-V 209 (476)
T ss_pred EeCCCcEEEecCCCccEEEEEEEeecccccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccc-e
Confidence 96 677899999999999998632 1223333322 25666665432 2346889999999999999753 2
Q ss_pred CCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCC----------------ccceeecCCCC--eEEEEee
Q 036314 262 SAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTA----------------WPLSVIDSHKD--KVLCADW 323 (347)
Q Consensus 262 ~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~----------------~~~~~~~~h~~--~v~~~~~ 323 (347)
.+.++. ....+.+++.+|.+. .+..|+.+|.|.+.++.+. .....+.||.+ +|+|++.
T Consensus 210 --LLlti~-fp~si~av~lDpae~-~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLai 285 (476)
T KOG0646|consen 210 --LLLTIT-FPSSIKAVALDPAER-VVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAI 285 (476)
T ss_pred --eeEEEe-cCCcceeEEEccccc-EEEecCCcceEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEEE
Confidence 233332 345689999999875 5889999999999876532 22445789998 9999999
Q ss_pred c-CCCEEEEccCCceEEEeecccCC
Q 036314 324 W-RGDSVISGGVDSKLCVSSGVSIQ 347 (347)
Q Consensus 324 ~-~~~~l~s~s~D~~v~vw~~~~~~ 347 (347)
+ +|..|+||+.||+|+||+-.|-|
T Consensus 286 s~DgtlLlSGd~dg~VcvWdi~S~Q 310 (476)
T KOG0646|consen 286 STDGTLLLSGDEDGKVCVWDIYSKQ 310 (476)
T ss_pred ecCccEEEeeCCCCCEEEEecchHH
Confidence 8 78899999999999999987654
No 147
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.87 E-value=3.7e-19 Score=156.34 Aligned_cols=253 Identities=10% Similarity=0.088 Sum_probs=167.2
Q ss_pred eeeccCCC-CCEE-EEEecCCeEEEEcCC-CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccc
Q 036314 27 VSAVDGSN-PGFI-LTGCYDNLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELV 103 (347)
Q Consensus 27 v~~~~~~~-~~~l-~sg~~d~~i~iw~~~-~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~ 103 (347)
+..+++++ +..+ ++++.|+.+++||.. +.....+..+.. +..+.|++++. ..+++++.|++|++||+.+.+.
T Consensus 33 ~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~~~~~g~---~l~~~~~~~~~l~~~d~~~~~~- 107 (300)
T TIGR03866 33 PRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGPD-PELFALHPNGK---ILYIANEDDNLVTVIDIETRKV- 107 (300)
T ss_pred CCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCCCC-ccEEEECCCCC---EEEEEcCCCCeEEEEECCCCeE-
Confidence 56677774 4554 677889999999975 555555665544 46778887543 2345667789999999976432
Q ss_pred cCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCC-cEEEEecCCCCCCCccceeeeccCCCccccccccccccccc
Q 036314 104 NHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDC-TISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTL 182 (347)
Q Consensus 104 ~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg-~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (347)
+..+. +...+.+++|+|+|+++++++.++ .+.+||..+... ....
T Consensus 108 --------~~~~~-~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~-------------------------~~~~ 153 (300)
T TIGR03866 108 --------LAEIP-VGVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEI-------------------------VDNV 153 (300)
T ss_pred --------EeEee-CCCCcceEEECCCCCEEEEEecCCCeEEEEeCCCCeE-------------------------EEEE
Confidence 22333 223467899999999999888775 466778654311 0001
Q ss_pred cCCccceEEEEe-CCCCeEE-EEecCCcEEEEECCCCceeeeeeeC------e--eeEEEEeeCCCCcEEEEecCCCcEE
Q 036314 183 VGHTQCVSSVVW-PQQETIY-SASWDHSVRTWDVEMGKDLSDIFCG------K--ALNCIDIGGEGSALIAAGGSDPILR 252 (347)
Q Consensus 183 ~~h~~~v~~~~~-~~~~~l~-s~s~dg~v~vwd~~~~~~~~~~~~~------~--~~~~~~~~~~~~~~la~~~~d~~i~ 252 (347)
. .......+.| ++++.|+ ++..++.|++||+++++.+..+... . ....+.+++++..++++.+.++.+.
T Consensus 154 ~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~ 232 (300)
T TIGR03866 154 L-VDQRPRFAEFTADGKELWVSSEIGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVA 232 (300)
T ss_pred E-cCCCccEEEECCCCCEEEEEcCCCCEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEEEEEcCCCCeEE
Confidence 0 0112344566 5677764 4456899999999988766554321 1 1234667666655455556677899
Q ss_pred EEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEE-eCCCcEEEEEcCCCccceeecCCCCeEEEEeecC
Q 036314 253 IWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA-SYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR 325 (347)
Q Consensus 253 iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~-s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~ 325 (347)
+||++.. .....+ .+...+.+++|+|++.. |+++ +.+++|++||+++++.+.++... ...+.++++|
T Consensus 233 v~d~~~~---~~~~~~-~~~~~~~~~~~~~~g~~-l~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~~~ 300 (300)
T TIGR03866 233 VVDAKTY---EVLDYL-LVGQRVWQLAFTPDEKY-LLTTNGVSNDVSVIDVAALKVIKSIKVG-RLPWGVVVRP 300 (300)
T ss_pred EEECCCC---cEEEEE-EeCCCcceEEECCCCCE-EEEEcCCCCeEEEEECCCCcEEEEEEcc-cccceeEeCC
Confidence 9998642 122222 24457889999999975 5554 67999999999999888888654 4557777653
No 148
>KOG2096 consensus WD40 repeat protein [General function prediction only]
Probab=99.87 E-value=3.5e-20 Score=153.13 Aligned_cols=259 Identities=21% Similarity=0.286 Sum_probs=166.7
Q ss_pred EEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceee-eeeccccceEEEEEeCCCC-EE
Q 036314 57 THILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFK-ILRGHKASVHSIAAETSGN-MV 134 (347)
Q Consensus 57 ~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~-~~~~h~~~V~~v~~s~~~~-~l 134 (347)
+..|.||.+.|++++|+. +++.|+|++.|++||+|++..-+... . ++++ .+. -+..+.|+|.||.+ .+
T Consensus 79 ~~~LKgH~~~vt~~~FsS----dGK~lat~~~Dr~Ir~w~~~DF~~~e--H--r~~R~nve--~dhpT~V~FapDc~s~v 148 (420)
T KOG2096|consen 79 VSVLKGHKKEVTDVAFSS----DGKKLATISGDRSIRLWDVRDFENKE--H--RCIRQNVE--YDHPTRVVFAPDCKSVV 148 (420)
T ss_pred hhhhhccCCceeeeEEcC----CCceeEEEeCCceEEEEecchhhhhh--h--hHhhcccc--CCCceEEEECCCcceEE
Confidence 346889999999999998 44579999999999999986532111 1 1111 111 12346789999986 55
Q ss_pred EEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeC-CCCeEEEEecCCcEEEEE
Q 036314 135 CSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP-QQETIYSASWDHSVRTWD 213 (347)
Q Consensus 135 ~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~l~s~s~dg~v~vwd 213 (347)
++.-...++++|.+......+... . ...... +..-+-|.-.+..+... .+.+|+|++.|.+|.+|+
T Consensus 149 v~~~~g~~l~vyk~~K~~dG~~~~-~-------~v~~D~-----~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~ 215 (420)
T KOG2096|consen 149 VSVKRGNKLCVYKLVKKTDGSGSH-H-------FVHIDN-----LEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWD 215 (420)
T ss_pred EEEccCCEEEEEEeeecccCCCCc-c-------cccccc-----cccchhcccceEEEeecCCceEEEEecCCCcEEEEe
Confidence 677777899999765432211000 0 000000 00112244445555443 567899999999999999
Q ss_pred CCCCceeeeeeeCee-eEEEEeeCCCCcEEEEecCCCcEEEEeCCCC--C---CCCCeEEecCCCCCeeEEEeCCCCCeE
Q 036314 214 VEMGKDLSDIFCGKA-LNCIDIGGEGSALIAAGGSDPILRIWDPRKP--G---TSAPVFQFSSHNSWISACKWHNKSWFH 287 (347)
Q Consensus 214 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~--~---~~~~~~~~~~h~~~v~~v~~s~~~~~~ 287 (347)
++ |+.+..+..... ....++ +|+++++|+++.---|++|.+--. + .....+.+.||.+.|...+|+|+.. .
T Consensus 216 lk-Gq~L~~idtnq~~n~~aav-SP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~-r 292 (420)
T KOG2096|consen 216 LK-GQLLQSIDTNQSSNYDAAV-SPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSST-R 292 (420)
T ss_pred cC-Cceeeeeccccccccceee-CCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcc-e
Confidence 98 777777654432 233444 456778899888889999985211 1 1234688999999999999999875 6
Q ss_pred EEEEeCCCcEEEEEcCCC----cc---ceee----cCCCCeEEEEeecC-CCEEEEccCCceEEEee
Q 036314 288 LISASYDGKVMLWDLRTA----WP---LSVI----DSHKDKVLCADWWR-GDSVISGGVDSKLCVSS 342 (347)
Q Consensus 288 l~s~s~D~~i~lwd~~~~----~~---~~~~----~~h~~~v~~~~~~~-~~~l~s~s~D~~v~vw~ 342 (347)
++|.|.||++||||.+-. +. +++. ..-.+.-..++.+| |+.||. +...++.++.
T Consensus 293 ~vtvSkDG~wriwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~-s~gs~l~~~~ 358 (420)
T KOG2096|consen 293 AVTVSKDGKWRIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPVRLELSPSGDSLAV-SFGSDLKVFA 358 (420)
T ss_pred eEEEecCCcEEEeeccceEecCCCchHhhcCCcchhhcCCCceEEEeCCCCcEEEe-ecCCceEEEE
Confidence 999999999999997632 22 2222 11122333677877 545543 4555666653
No 149
>KOG4378 consensus Nuclear protein COP1 [Signal transduction mechanisms]
Probab=99.87 E-value=3.6e-20 Score=161.11 Aligned_cols=253 Identities=17% Similarity=0.223 Sum_probs=183.5
Q ss_pred eeeccCCCCCEEE--EEecCCeEEEEcCCCe-----EEEEeeccC-CceEEEEEeecCCCceEEEEEccCCCcEEEEecc
Q 036314 27 VSAVDGSNPGFIL--TGCYDNLGRVWKAGGV-----CTHILEGHC-GAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFD 98 (347)
Q Consensus 27 v~~~~~~~~~~l~--sg~~d~~i~iw~~~~~-----~~~~l~~h~-~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~ 98 (347)
+.++......+|+ +.+.|..+++|.-.|+ .+..+.|.. ..|.++.++ .++++|+..++|+|||+.
T Consensus 37 ~~s~~w~~~n~lvvas~~gdk~~~~~~K~g~~~~Vp~~~k~~gd~~~Cv~~~s~S-------~y~~sgG~~~~Vkiwdl~ 109 (673)
T KOG4378|consen 37 DFSFNWQRRNFLVVASMAGDKVMRIKEKDGKTPEVPRVRKLTGDNAFCVACASQS-------LYEISGGQSGCVKIWDLR 109 (673)
T ss_pred ceeeeccccceEEEeecCCceeEEEecccCCCCccceeeccccchHHHHhhhhcc-------eeeeccCcCceeeehhhH
Confidence 6777766555444 4556779999964333 223334432 233444333 478999999999999997
Q ss_pred ccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccc
Q 036314 99 AEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEA 178 (347)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (347)
.. .+.+.+.+|++.|++|.++-...+||+++..|.|.|-.+.+...
T Consensus 110 ~k---------l~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~------------------------- 155 (673)
T KOG4378|consen 110 AK---------LIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQK------------------------- 155 (673)
T ss_pred HH---------HHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCcc-------------------------
Confidence 43 23456789999999999999999999999999999998765321
Q ss_pred cccccCC-ccceEEEEeCCCC--eEEEEecCCcEEEEECCCCceeeeee--eCeeeEEEEeeCCCCcEEEEecCCCcEEE
Q 036314 179 ISTLVGH-TQCVSSVVWPQQE--TIYSASWDHSVRTWDVEMGKDLSDIF--CGKALNCIDIGGEGSALIAAGGSDPILRI 253 (347)
Q Consensus 179 ~~~~~~h-~~~v~~~~~~~~~--~l~s~s~dg~v~vwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~la~~~~d~~i~i 253 (347)
..++... ...|+-+.|+... .|.+++.+|.|.+||+....++..+. +..+...++|+|.+..+|++-+.|.+|.+
T Consensus 156 tt~f~~~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~ 235 (673)
T KOG4378|consen 156 TTTFTIDSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINI 235 (673)
T ss_pred ccceecCCCCeEEEeecccccceeeEeeccCCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEecccceEEE
Confidence 1112111 2345556664332 47788999999999998777666554 34466778999999999999999999999
Q ss_pred EeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCC-CccceeecCCCCeEEEEeecC
Q 036314 254 WDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRT-AWPLSVIDSHKDKVLCADWWR 325 (347)
Q Consensus 254 wd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~-~~~~~~~~~h~~~v~~~~~~~ 325 (347)
||++.... ...+. -..+...++|.++| ++|+.|...|.|..||+|. ..++.++..|...|.+++|-+
T Consensus 236 yD~~s~~s---~~~l~-y~~Plstvaf~~~G-~~L~aG~s~G~~i~YD~R~~k~Pv~v~sah~~sVt~vafq~ 303 (673)
T KOG4378|consen 236 YDIRSQAS---TDRLT-YSHPLSTVAFSECG-TYLCAGNSKGELIAYDMRSTKAPVAVRSAHDASVTRVAFQP 303 (673)
T ss_pred eecccccc---cceee-ecCCcceeeecCCc-eEEEeecCCceEEEEecccCCCCceEeeecccceeEEEeee
Confidence 99985332 11221 22357789999998 4699999999999999985 467889999999999999954
No 150
>KOG4328 consensus WD40 protein [Function unknown]
Probab=99.87 E-value=4.2e-20 Score=159.19 Aligned_cols=254 Identities=17% Similarity=0.263 Sum_probs=181.8
Q ss_pred EeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCC-CEEEEe
Q 036314 59 ILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSG-NMVCSG 137 (347)
Q Consensus 59 ~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~-~~l~sg 137 (347)
...-|.+.|++++|+|..+ ..++|+|..-|+|-+||+..++ +....+..+..|..+|.++.|+|.+ ..+++.
T Consensus 181 v~kv~~~Rit~l~fHPt~~--~~lva~GdK~G~VG~Wn~~~~~-----~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ss 253 (498)
T KOG4328|consen 181 VAKVTDRRITSLAFHPTEN--RKLVAVGDKGGQVGLWNFGTQE-----KDKDGVYLFTPHSGPVSGLKFSPANTSQIYSS 253 (498)
T ss_pred eeEecccceEEEEecccCc--ceEEEEccCCCcEEEEecCCCC-----CccCceEEeccCCccccceEecCCChhheeee
Confidence 4455788999999999653 2578999999999999996332 1122445688999999999999976 689999
Q ss_pred eCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeC-CCCeEEEEecCCcEEEEECCC
Q 036314 138 SWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP-QQETIYSASWDHSVRTWDVEM 216 (347)
Q Consensus 138 s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~l~s~s~dg~v~vwd~~~ 216 (347)
|+||+||+=|++.... +.+..+..-.....++.++ +...++.+..=|.+.+||+++
T Consensus 254 SyDGtiR~~D~~~~i~-----------------------e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~ 310 (498)
T KOG4328|consen 254 SYDGTIRLQDFEGNIS-----------------------EEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRT 310 (498)
T ss_pred ccCceeeeeeecchhh-----------------------HHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeec
Confidence 9999999998875311 1111222222334455554 445566666556999999998
Q ss_pred Cce-eeeee-eCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCC-CeEEecCCCCCeeEEEeCCCCCeEEEEEeC
Q 036314 217 GKD-LSDIF-CGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSA-PVFQFSSHNSWISACKWHNKSWFHLISASY 293 (347)
Q Consensus 217 ~~~-~~~~~-~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~-~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~ 293 (347)
+.. ...+. +...+..+++.|....++|+++.|++++|||+|+..... |....-.|...|.+..|||.+.. |+|.+.
T Consensus 311 ~~s~~~~~~lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gt-l~TT~~ 389 (498)
T KOG4328|consen 311 DGSEYENLRLHKKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGT-LLTTCQ 389 (498)
T ss_pred CCccchhhhhhhcccceeecCCCCchheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCc-eEeecc
Confidence 653 33332 345789999999989999999999999999998643322 33444579999999999999987 999999
Q ss_pred CCcEEEEEcC----CCccceeecCCCC------eEEEEeecC-CCEEEEccCCceEEEeecc
Q 036314 294 DGKVMLWDLR----TAWPLSVIDSHKD------KVLCADWWR-GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 294 D~~i~lwd~~----~~~~~~~~~~h~~------~v~~~~~~~-~~~l~s~s~D~~v~vw~~~ 344 (347)
|..|+|||.. .-++..++. |.. .....+|.| ..+++.|-.-..|-|+++.
T Consensus 390 D~~IRv~dss~~sa~~~p~~~I~-Hn~~t~RwlT~fKA~W~P~~~li~vg~~~r~IDv~~~~ 450 (498)
T KOG4328|consen 390 DNEIRVFDSSCISAKDEPLGTIP-HNNRTGRWLTPFKAAWDPDYNLIVVGRYPRPIDVFDGN 450 (498)
T ss_pred CCceEEeecccccccCCccceee-ccCcccccccchhheeCCCccEEEEeccCcceeEEcCC
Confidence 9999999984 333333332 221 123467755 4467787777778777765
No 151
>KOG1408 consensus WD40 repeat protein [Function unknown]
Probab=99.87 E-value=1.6e-19 Score=163.29 Aligned_cols=284 Identities=16% Similarity=0.225 Sum_probs=197.8
Q ss_pred CC-CCCEEEEEecCCeEEEEcCC-----CeEEEEeeccCCceEEEEEeecC-------CCceEEEEEccCCCcEEEEecc
Q 036314 32 GS-NPGFILTGCYDNLGRVWKAG-----GVCTHILEGHCGAVSSVNIIKSD-------GLKYVTVATASKDQTLRLWKFD 98 (347)
Q Consensus 32 ~~-~~~~l~sg~~d~~i~iw~~~-----~~~~~~l~~h~~~V~~v~~~~~~-------~~~~~~l~s~s~Dg~v~~wd~~ 98 (347)
|. ..+.|...-.|..+++||+. |++ ..+--|...|+.+...|-. -.....+.|+|.|++||+|+++
T Consensus 332 Fdet~~klscVYndhSlYvWDvrD~~kvgk~-~s~lyHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSsD~TIRlW~l~ 410 (1080)
T KOG1408|consen 332 FDETTDKLSCVYNDHSLYVWDVRDVNKVGKC-SSMLYHSACIWDVENLPCNVHSPTAACLPRGCFTTCSSDGTIRLWDLA 410 (1080)
T ss_pred ecCCCceEEEEEcCceEEEEeccccccccce-eeeeeccceeeeeccccccccCcccccCCccceeEecCCCcEEEeecc
Confidence 55 34567777789999999974 333 3455688888887765411 0011247899999999999987
Q ss_pred ccc---c----------ccCc---c------------ccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCC
Q 036314 99 AEE---L----------VNHP---K------------KIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTND 150 (347)
Q Consensus 99 ~~~---~----------~~~~---~------------~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~ 150 (347)
..+ . +..+ . ..+.....-+..-.+++++.+|+|+.|++|..-|+++||++..
T Consensus 411 ~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~ 490 (1080)
T KOG1408|consen 411 FCTNNQVYRRNILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVSPDGQHLASGDRGGNLRVYDLQE 490 (1080)
T ss_pred cccccceeecccchhhhhcCccccCchhhhhhccCCcccccchhhcCcccceEEEEECCCcceecccCccCceEEEEehh
Confidence 521 1 0000 0 0011111223456789999999999999999999999999875
Q ss_pred CCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeCC----CCeEEEEecCCcEEEEECCCCcee-eeeee
Q 036314 151 SDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQ----QETIYSASWDHSVRTWDVEMGKDL-SDIFC 225 (347)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~----~~~l~s~s~dg~v~vwd~~~~~~~-~~~~~ 225 (347)
. .....+..|+..|.++.|+. .+.|++++.|+.|.|||+...-.+ .++-.
T Consensus 491 l-------------------------~~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rny~l~qtld~ 545 (1080)
T KOG1408|consen 491 L-------------------------EYTCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRNYDLVQTLDG 545 (1080)
T ss_pred h-------------------------hhhhheecccceeEEEeecCchhhhHhhhhccCCceEEEEecccccchhhhhcc
Confidence 3 22446678999999999852 356899999999999999765433 33332
Q ss_pred -CeeeEEEEeeCCCC-cEEEEecCCCcEEEEeCCCCCCCCCeEEecCCC-----CCeeEEEeCCCCCeEEEEEeCCCcEE
Q 036314 226 -GKALNCIDIGGEGS-ALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHN-----SWISACKWHNKSWFHLISASYDGKVM 298 (347)
Q Consensus 226 -~~~~~~~~~~~~~~-~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~-----~~v~~v~~s~~~~~~l~s~s~D~~i~ 298 (347)
...++.+.|...+. ..+++++.|..|.+---++... -..+..|+ ..+.+++..|... ++++++.|..|+
T Consensus 546 HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~---g~~f~r~t~t~~ktTlYDm~Vdp~~k-~v~t~cQDrnir 621 (1080)
T KOG1408|consen 546 HSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASS---GRLFPRHTQTLSKTTLYDMAVDPTSK-LVVTVCQDRNIR 621 (1080)
T ss_pred cccceeEEEEeecCCceEEEeccCchhhheehhccccC---ceeccccccccccceEEEeeeCCCcc-eEEEEecccceE
Confidence 34678888865553 3466788888775533222111 12222333 2477888888875 699999999999
Q ss_pred EEEcCCCccceeec---CCCCeEEEEeecC-CCEEEEccCCceEEEeeccc
Q 036314 299 LWDLRTAWPLSVID---SHKDKVLCADWWR-GDSVISGGVDSKLCVSSGVS 345 (347)
Q Consensus 299 lwd~~~~~~~~~~~---~h~~~v~~~~~~~-~~~l~s~s~D~~v~vw~~~~ 345 (347)
|||+..++..+.|. +|.+....+..-| |-+||+...|+++++++.+|
T Consensus 622 if~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~s 672 (1080)
T KOG1408|consen 622 IFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVS 672 (1080)
T ss_pred EEeccccceeeeecccccCCCceEEEEECCCccEEEEeecCCceEEEEecc
Confidence 99999999998886 4666777777755 77899999999999998764
No 152
>KOG4378 consensus Nuclear protein COP1 [Signal transduction mechanisms]
Probab=99.86 E-value=3.1e-20 Score=161.52 Aligned_cols=261 Identities=14% Similarity=0.204 Sum_probs=193.4
Q ss_pred CeEEEEcCCCeE-EEEeeccC--CceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccc
Q 036314 45 NLGRVWKAGGVC-THILEGHC--GAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKAS 121 (347)
Q Consensus 45 ~~i~iw~~~~~~-~~~l~~h~--~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~ 121 (347)
.++++||..... .-.+..|+ ..++++.|.... ...+++.+.|..|++|.-..... .......+.+. .
T Consensus 12 d~~kl~D~s~~~~~~~~~~~t~~pg~~s~~w~~~n---~lvvas~~gdk~~~~~~K~g~~~-----~Vp~~~k~~gd--~ 81 (673)
T KOG4378|consen 12 DKTKLSDFSDLETKSEYVHQTAEPGDFSFNWQRRN---FLVVASMAGDKVMRIKEKDGKTP-----EVPRVRKLTGD--N 81 (673)
T ss_pred CceEEeecccccCccccccCCCCCcceeeeccccc---eEEEeecCCceeEEEecccCCCC-----ccceeeccccc--h
Confidence 378999964211 11122222 227888887632 24567788899999998654310 11122333333 3
Q ss_pred eEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeC-CCCeE
Q 036314 122 VHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP-QQETI 200 (347)
Q Consensus 122 V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~l 200 (347)
-.||+......++++|+..++|+|||+... -+.+.+++|+..|.++.|. .+.+|
T Consensus 82 ~~Cv~~~s~S~y~~sgG~~~~Vkiwdl~~k-------------------------l~hr~lkdh~stvt~v~YN~~Deyi 136 (673)
T KOG4378|consen 82 AFCVACASQSLYEISGGQSGCVKIWDLRAK-------------------------LIHRFLKDHQSTVTYVDYNNTDEYI 136 (673)
T ss_pred HHHHhhhhcceeeeccCcCceeeehhhHHH-------------------------HHhhhccCCcceeEEEEecCCccee
Confidence 345555555689999999999999998632 2356788999999999985 56799
Q ss_pred EEEecCCcEEEEECCCCceeeeeeeC--eeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeE-EecCCCCCeeE
Q 036314 201 YSASWDHSVRTWDVEMGKDLSDIFCG--KALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVF-QFSSHNSWISA 277 (347)
Q Consensus 201 ~s~s~dg~v~vwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~-~~~~h~~~v~~ 277 (347)
++++..|-|.|..+.++.....+..+ ..+.-+.+++....++.+++++|.|.+||.... .+.+ -.+.|..+...
T Consensus 137 Asvs~gGdiiih~~~t~~~tt~f~~~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~g~---sp~~~~~~~HsAP~~g 213 (673)
T KOG4378|consen 137 ASVSDGGDIIIHGTKTKQKTTTFTIDSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGM---SPIFHASEAHSAPCRG 213 (673)
T ss_pred EEeccCCcEEEEecccCccccceecCCCCeEEEeecccccceeeEeeccCCeEEEEeccCC---CcccchhhhccCCcCc
Confidence 99999999999999988766555433 356678888888888999999999999998742 2233 34678888899
Q ss_pred EEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeecC-CCEEEEccCCceEEEeecc
Q 036314 278 CKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 278 v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~D~~v~vw~~~ 344 (347)
+.|+|.++.+|++.+.|+.|.+||++.......+.+ ..+...|+|.+ |.+|+.|+..|.|..|+.-
T Consensus 214 icfspsne~l~vsVG~Dkki~~yD~~s~~s~~~l~y-~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R 280 (673)
T KOG4378|consen 214 ICFSPSNEALLVSVGYDKKINIYDIRSQASTDRLTY-SHPLSTVAFSECGTYLCAGNSKGELIAYDMR 280 (673)
T ss_pred ceecCCccceEEEecccceEEEeecccccccceeee-cCCcceeeecCCceEEEeecCCceEEEEecc
Confidence 999999999999999999999999997776777765 34778999985 8889999999999999854
No 153
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.85 E-value=1.4e-17 Score=152.00 Aligned_cols=287 Identities=29% Similarity=0.440 Sum_probs=209.7
Q ss_pred CCCCcCCceeeccCC-CCCEEEEEecCCeEEEEcCCCe--EEEEeeccCC-ceEEEEE-eecCCCceEEEEE-ccCCCcE
Q 036314 19 EPSLHDDWVSAVDGS-NPGFILTGCYDNLGRVWKAGGV--CTHILEGHCG-AVSSVNI-IKSDGLKYVTVAT-ASKDQTL 92 (347)
Q Consensus 19 ~~~~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~~~--~~~~l~~h~~-~V~~v~~-~~~~~~~~~~l~s-~s~Dg~v 92 (347)
....|...+..+.+. .+..++.++.|+.+.+|+.... ....+.++.. .+..+.+ .++.. ..++. +..|+.+
T Consensus 60 ~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~d~~~ 136 (466)
T COG2319 60 LLRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDGN---SILLASSSLDGTV 136 (466)
T ss_pred eeeeccceEEEEEECCCCcEEEEecCCCcEEEEEcCCCceeEEEEeccCCCceeeEEEECCCcc---eEEeccCCCCccE
Confidence 345899999999987 4568888989999999997543 5666777543 6777766 33222 23444 4559999
Q ss_pred EEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeC-CCcEEEEecCCCCCCCccceeeeccCCCcccc
Q 036314 93 RLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSW-DCTISLWRTNDSDAAGNQVSIKKRKGNNQVEE 171 (347)
Q Consensus 93 ~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~-Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 171 (347)
++|+.... ......+..|...|..++|++++..+++++. |+.+++|++...
T Consensus 137 ~~~~~~~~--------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------- 188 (466)
T COG2319 137 KLWDLSTP--------GKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTG-------------------- 188 (466)
T ss_pred EEEEecCC--------CeEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCC--------------------
Confidence 99998751 1244567889999999999999998888886 999999998642
Q ss_pred ccccccccccccCCccceEEEEeC-CCC-eEEEEecCCcEEEEECCCCceee-eeeeCeeeEEEEeeCCCCcEEEEecCC
Q 036314 172 PQLEGEAISTLVGHTQCVSSVVWP-QQE-TIYSASWDHSVRTWDVEMGKDLS-DIFCGKALNCIDIGGEGSALIAAGGSD 248 (347)
Q Consensus 172 ~~~~~~~~~~~~~h~~~v~~~~~~-~~~-~l~s~s~dg~v~vwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~la~~~~d 248 (347)
..+..+.+|...+.++.|. ++. .+++++.|+.+++||...+.... .+..+.......+.+.+ ..+++++.|
T Consensus 189 -----~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d 262 (466)
T COG2319 189 -----KPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSVVSSFSPDG-SLLASGSSD 262 (466)
T ss_pred -----ceEEeeccCCCceEEEEEcCCcceEEEEecCCCcEEEEECCCCcEEeeecCCCCcceeEeECCCC-CEEEEecCC
Confidence 2244566688999999985 555 45556999999999988666665 34332222122565554 677889999
Q ss_pred CcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeec--CCCCeEEEEeecCC
Q 036314 249 PILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVID--SHKDKVLCADWWRG 326 (347)
Q Consensus 249 ~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~--~h~~~v~~~~~~~~ 326 (347)
+.+++||++.... ....+.+|...+.++.|+|++.. +++++.|+.+++||.+......... .|.+.+..+.|.+.
T Consensus 263 ~~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (466)
T COG2319 263 GTIRLWDLRSSSS--LLRTLSGHSSSVLSVAFSPDGKL-LASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPD 339 (466)
T ss_pred CcEEEeeecCCCc--EEEEEecCCccEEEEEECCCCCE-EEEeeCCCcEEEEEcCCCceEEEeeecccCCceEEEEECCC
Confidence 9999999875432 23333678899999999997655 6668888999999998876665554 88888888888322
Q ss_pred -CEEEEc-cCCceEEEeeccc
Q 036314 327 -DSVISG-GVDSKLCVSSGVS 345 (347)
Q Consensus 327 -~~l~s~-s~D~~v~vw~~~~ 345 (347)
..++.+ ..|+.+.+|....
T Consensus 340 ~~~~~~~~~~d~~~~~~~~~~ 360 (466)
T COG2319 340 GSLLVSGGSDDGTIRLWDLRT 360 (466)
T ss_pred CCEEEEeecCCCcEEeeecCC
Confidence 455555 6889999988653
No 154
>KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics]
Probab=99.85 E-value=6e-20 Score=159.98 Aligned_cols=254 Identities=15% Similarity=0.260 Sum_probs=185.4
Q ss_pred ceEEEEEEeccCCCCcCCCCCcCCceeeccCC-CCCEEEEEecCCeEEEEcCCCe---EEEEeeccCCceEEEEEeecCC
Q 036314 2 KVLEIEYIKAVAPQKEEEPSLHDDWVSAVDGS-NPGFILTGCYDNLGRVWKAGGV---CTHILEGHCGAVSSVNIIKSDG 77 (347)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~~~---~~~~l~~h~~~V~~v~~~~~~~ 77 (347)
|||+|.-.-+-.|-+.-.-..-.++|++.... ++..|++||.-.++.|||+... ....|......-.+++++|+.
T Consensus 443 KVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeastlsiWDLAapTprikaeltssapaCyALa~spDa- 521 (705)
T KOG0639|consen 443 KVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDA- 521 (705)
T ss_pred EEeeccCCCCCCccccccccCcccceeeeEecCCCceEEeccccceeeeeeccCCCcchhhhcCCcchhhhhhhcCCcc-
Confidence 67777655333333333333467889988865 7789999999999999998532 223344444445677888843
Q ss_pred CceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCcc
Q 036314 78 LKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQ 157 (347)
Q Consensus 78 ~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~ 157 (347)
+...++..||.|+|||+.+.. .++.|.||++.+.|+.+++||..|.||+-|.+||-||++.+.
T Consensus 522 ---kvcFsccsdGnI~vwDLhnq~---------~VrqfqGhtDGascIdis~dGtklWTGGlDntvRcWDlregr----- 584 (705)
T KOG0639|consen 522 ---KVCFSCCSDGNIAVWDLHNQT---------LVRQFQGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLREGR----- 584 (705)
T ss_pred ---ceeeeeccCCcEEEEEcccce---------eeecccCCCCCceeEEecCCCceeecCCCccceeehhhhhhh-----
Confidence 467889999999999998764 346789999999999999999999999999999999987542
Q ss_pred ceeeeccCCCccccccccccccccccCC--ccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeeeeCeeeEEEEe
Q 036314 158 VSIKKRKGNNQVEEPQLEGEAISTLVGH--TQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDI 234 (347)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h--~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~ 234 (347)
.+..| ...|.++.+ |.++.|+.|=.++.+-|-.....+....-.+...+-.+.|
T Consensus 585 -----------------------qlqqhdF~SQIfSLg~cP~~dWlavGMens~vevlh~skp~kyqlhlheScVLSlKF 641 (705)
T KOG0639|consen 585 -----------------------QLQQHDFSSQIFSLGYCPTGDWLAVGMENSNVEVLHTSKPEKYQLHLHESCVLSLKF 641 (705)
T ss_pred -----------------------hhhhhhhhhhheecccCCCccceeeecccCcEEEEecCCccceeecccccEEEEEEe
Confidence 11222 345777765 7888999998888888877654433222223445677888
Q ss_pred eCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEc
Q 036314 235 GGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDL 302 (347)
Q Consensus 235 ~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~ 302 (347)
.+-+ ..+++.+.|+.+..|..--+ ..+++. ...+.|.+|..+.|+. +++|||.|+...||.+
T Consensus 642 a~cG-kwfvStGkDnlLnawrtPyG---asiFqs-kE~SsVlsCDIS~ddk-yIVTGSGdkkATVYeV 703 (705)
T KOG0639|consen 642 AYCG-KWFVSTGKDNLLNAWRTPYG---ASIFQS-KESSSVLSCDISFDDK-YIVTGSGDKKATVYEV 703 (705)
T ss_pred cccC-ceeeecCchhhhhhccCccc---cceeec-cccCcceeeeeccCce-EEEecCCCcceEEEEE
Confidence 6654 57888899999999976432 235554 3566799999998885 5999999999888875
No 155
>KOG0642 consensus Cell-cycle nuclear protein, contains WD-40 repeats [Cell cycle control, cell division, chromosome partitioning]
Probab=99.84 E-value=5.4e-20 Score=162.39 Aligned_cols=263 Identities=18% Similarity=0.189 Sum_probs=172.8
Q ss_pred CCCcCCceeeccCCC-CCEEEEEecCCeEEEEcCC------C---eEEEEeeccCCceEEEEEeecCCCceEEEEEccCC
Q 036314 20 PSLHDDWVSAVDGSN-PGFILTGCYDNLGRVWKAG------G---VCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKD 89 (347)
Q Consensus 20 ~~~h~~~v~~~~~~~-~~~l~sg~~d~~i~iw~~~------~---~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~D 89 (347)
..-|.+.|++++|.+ ...|++++.||++++|++. . +.+.+|.+|.++|.|+.+.+ .+..+++|+.|
T Consensus 290 l~s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~----n~~~~ysgg~D 365 (577)
T KOG0642|consen 290 LRSHDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPS----NGEHCYSGGID 365 (577)
T ss_pred eecchhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecC----CceEEEeeccC
Confidence 446899999999874 4589999999999999871 1 24567999999999999876 33579999999
Q ss_pred CcEEEEeccccccccC-ccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCc
Q 036314 90 QTLRLWKFDAEELVNH-PKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQ 168 (347)
Q Consensus 90 g~v~~wd~~~~~~~~~-~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~ 168 (347)
|+|+.|++..+.-... -........+.||++.|+.+++|+...+|+++|.|||+++|+...... ....
T Consensus 366 g~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~-----~~f~------ 434 (577)
T KOG0642|consen 366 GTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESP-----CTFG------ 434 (577)
T ss_pred ceeeeeccCCCCCcccccCcchhccceeccccceeeeeecccccceeeecCCceEEeeccCCcCc-----cccC------
Confidence 9999998763321100 111233456889999999999999999999999999999998654321 0000
Q ss_pred cccccccccccccccCCccceEEEEeCCCC--eEEEEecCCcEEEEECCCCceeeeeee--------CeeeEEEEeeCCC
Q 036314 169 VEEPQLEGEAISTLVGHTQCVSSVVWPQQE--TIYSASWDHSVRTWDVEMGKDLSDIFC--------GKALNCIDIGGEG 238 (347)
Q Consensus 169 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~l~s~s~dg~v~vwd~~~~~~~~~~~~--------~~~~~~~~~~~~~ 238 (347)
....|. .-.++.+-..+ ..++...-+.-.++|.+....+..+.. ...++-+..++..
T Consensus 435 ------------~~~e~g-~Plsvd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~ 501 (577)
T KOG0642|consen 435 ------------EPKEHG-YPLSVDRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTA 501 (577)
T ss_pred ------------CccccC-CcceEeeccchhHhhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCC
Confidence 000000 00111110000 011111111111222222222221111 0122333444444
Q ss_pred CcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCC
Q 036314 239 SALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHK 315 (347)
Q Consensus 239 ~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~ 315 (347)
.+..++.+|..|+++|-.. ..+++....|...++++++.|+|.+ |++++.|+.+++|.+....++.....|.
T Consensus 502 -~~~~~~hed~~Ir~~dn~~---~~~l~s~~a~~~svtslai~~ng~~-l~s~s~d~sv~l~kld~k~~~~es~~~r 573 (577)
T KOG0642|consen 502 -DITFTAHEDRSIRFFDNKT---GKILHSMVAHKDSVTSLAIDPNGPY-LMSGSHDGSVRLWKLDVKTCVLESTAHR 573 (577)
T ss_pred -CeeEecccCCceecccccc---cccchheeeccceecceeecCCCce-EEeecCCceeehhhccchheeecccccc
Confidence 5778899999999999764 3456777789999999999999975 9999999999999998766666666665
No 156
>KOG1273 consensus WD40 repeat protein [General function prediction only]
Probab=99.84 E-value=5.2e-19 Score=146.02 Aligned_cols=282 Identities=13% Similarity=0.243 Sum_probs=189.5
Q ss_pred eeeccCC-CCCEEEEEecCCeEEEEcCCC-eEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEecccccccc
Q 036314 27 VSAVDGS-NPGFILTGCYDNLGRVWKAGG-VCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVN 104 (347)
Q Consensus 27 v~~~~~~-~~~~l~sg~~d~~i~iw~~~~-~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~ 104 (347)
-.++.|+ -|.+||.|+.||.+-|||... ..-+.|.+|.-+|.++.|++++ +.|+|+|.|..|++||+..+.++
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dg----r~LltsS~D~si~lwDl~~gs~l- 100 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDG----RKLLTSSRDWSIKLWDLLKGSPL- 100 (405)
T ss_pred cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecCCC----CEeeeecCCceeEEEeccCCCce-
Confidence 5567788 578999999999999999753 2446789999999999999944 57999999999999999877532
Q ss_pred CccccceeeeeeccccceEEEEEeCCC-CEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccccccccccc
Q 036314 105 HPKKIRSFKILRGHKASVHSIAAETSG-NMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLV 183 (347)
Q Consensus 105 ~~~~~~~~~~~~~h~~~V~~v~~s~~~-~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (347)
+.++ ..++|..+.|+|-. +.++..-.+..-.+-+..++... . . +... ++. +..-.
T Consensus 101 --------~rir-f~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~--~-----L-----p~d~--d~d-ln~sa 156 (405)
T KOG1273|consen 101 --------KRIR-FDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHS--V-----L-----PKDD--DGD-LNSSA 156 (405)
T ss_pred --------eEEE-ccCccceeeeccccCCeEEEEEecCCcEEEEecCCcee--e-----c-----cCCC--ccc-ccccc
Confidence 2232 47889999998854 34443333333334343321100 0 0 0000 000 00000
Q ss_pred CCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeeeeC--eeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCC
Q 036314 184 GHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCG--KALNCIDIGGEGSALIAAGGSDPILRIWDPRKPG 260 (347)
Q Consensus 184 ~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~ 260 (347)
.| ..| ..|+++++|...|.+.++|..+-+++..+.-. ..+..+-+.- .+..++..+.|..||.|+++.-.
T Consensus 157 s~------~~fdr~g~yIitGtsKGkllv~~a~t~e~vas~rits~~~IK~I~~s~-~g~~liiNtsDRvIR~ye~~di~ 229 (405)
T KOG1273|consen 157 SH------GVFDRRGKYIITGTSKGKLLVYDAETLECVASFRITSVQAIKQIIVSR-KGRFLIINTSDRVIRTYEISDID 229 (405)
T ss_pred cc------ccccCCCCEEEEecCcceEEEEecchheeeeeeeechheeeeEEEEec-cCcEEEEecCCceEEEEehhhhc
Confidence 11 123 46889999999999999999988777655422 3556666643 45678889999999999976211
Q ss_pred ------CCCCeEEec---CCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCC-CeEEEEeecCCC-EE
Q 036314 261 ------TSAPVFQFS---SHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHK-DKVLCADWWRGD-SV 329 (347)
Q Consensus 261 ------~~~~~~~~~---~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~-~~v~~~~~~~~~-~l 329 (347)
.+.+.+.+. .-..| .+|.|+.+|.+..|+.+.-..+.||.-..|..++.+.|.+ +....+.|+|-. .+
T Consensus 230 ~~~r~~e~e~~~K~qDvVNk~~W-k~ccfs~dgeYv~a~s~~aHaLYIWE~~~GsLVKILhG~kgE~l~DV~whp~rp~i 308 (405)
T KOG1273|consen 230 DEGRDGEVEPEHKLQDVVNKLQW-KKCCFSGDGEYVCAGSARAHALYIWEKSIGSLVKILHGTKGEELLDVNWHPVRPII 308 (405)
T ss_pred ccCccCCcChhHHHHHHHhhhhh-hheeecCCccEEEeccccceeEEEEecCCcceeeeecCCchhheeecccccceeee
Confidence 111111111 11112 4678999998766655566789999999999999998887 566789998754 45
Q ss_pred EEccCCceEEEeecccC
Q 036314 330 ISGGVDSKLCVSSGVSI 346 (347)
Q Consensus 330 ~s~s~D~~v~vw~~~~~ 346 (347)
++- ..|+|++|+-+++
T Consensus 309 ~si-~sg~v~iw~~~~~ 324 (405)
T KOG1273|consen 309 ASI-ASGVVYIWAVVQV 324 (405)
T ss_pred eec-cCCceEEEEeecc
Confidence 554 7899999997654
No 157
>KOG0303 consensus Actin-binding protein Coronin, contains WD40 repeats [Cytoskeleton]
Probab=99.84 E-value=2.8e-19 Score=151.60 Aligned_cols=215 Identities=17% Similarity=0.283 Sum_probs=161.5
Q ss_pred EeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCC-CEEEEe
Q 036314 59 ILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSG-NMVCSG 137 (347)
Q Consensus 59 ~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~-~~l~sg 137 (347)
.+.||+++|..++|.|-+. ..|||||+|.+|++|++..+.+... ..++...|.||...|.-|+|+|.. +.|+|+
T Consensus 76 ~v~GHt~~vLDi~w~PfnD---~vIASgSeD~~v~vW~IPe~~l~~~--ltepvv~L~gH~rrVg~V~wHPtA~NVLlsa 150 (472)
T KOG0303|consen 76 LVCGHTAPVLDIDWCPFND---CVIASGSEDTKVMVWQIPENGLTRD--LTEPVVELYGHQRRVGLVQWHPTAPNVLLSA 150 (472)
T ss_pred CccCccccccccccCccCC---ceeecCCCCceEEEEECCCcccccC--cccceEEEeecceeEEEEeecccchhhHhhc
Confidence 4779999999999998543 4799999999999999986654322 235677899999999999999986 688999
Q ss_pred eCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeC-CCCeEEEEecCCcEEEEECCC
Q 036314 138 SWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP-QQETIYSASWDHSVRTWDVEM 216 (347)
Q Consensus 138 s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~l~s~s~dg~v~vwd~~~ 216 (347)
+.|.+|.+||+.+++ .+.++. |.+.|.++.|+ +|.+|++++.|+.|||||.++
T Consensus 151 g~Dn~v~iWnv~tge-------------------------ali~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~ 204 (472)
T KOG0303|consen 151 GSDNTVSIWNVGTGE-------------------------ALITLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRR 204 (472)
T ss_pred cCCceEEEEeccCCc-------------------------eeeecC-CCCeEEEEEeccCCceeeeecccceeEEEcCCC
Confidence 999999999998753 233455 99999999995 788999999999999999999
Q ss_pred CceeeeeeeC--eeeEEEEeeCCCCcEEEEe---cCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEE
Q 036314 217 GKDLSDIFCG--KALNCIDIGGEGSALIAAG---GSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291 (347)
Q Consensus 217 ~~~~~~~~~~--~~~~~~~~~~~~~~~la~~---~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~ 291 (347)
++.+..-..+ .......|..++ .++.+| ..+..+.|||......+.....+. ..+.|.-=-|.|+..-.-++|
T Consensus 205 ~~~v~e~~~heG~k~~Raifl~~g-~i~tTGfsr~seRq~aLwdp~nl~eP~~~~elD-tSnGvl~PFyD~dt~ivYl~G 282 (472)
T KOG0303|consen 205 GTVVSEGVAHEGAKPARAIFLASG-KIFTTGFSRMSERQIALWDPNNLEEPIALQELD-TSNGVLLPFYDPDTSIVYLCG 282 (472)
T ss_pred CcEeeecccccCCCcceeEEeccC-ceeeeccccccccceeccCcccccCcceeEEec-cCCceEEeeecCCCCEEEEEe
Confidence 9877654322 222233333333 355554 347899999987655554444553 334455445678776656677
Q ss_pred eCCCcEEEEEcCCCc
Q 036314 292 SYDGKVMLWDLRTAW 306 (347)
Q Consensus 292 s~D~~i~lwd~~~~~ 306 (347)
-.|+.||-|++....
T Consensus 283 KGD~~IRYyEit~d~ 297 (472)
T KOG0303|consen 283 KGDSSIRYFEITNEP 297 (472)
T ss_pred cCCcceEEEEecCCC
Confidence 799999999997654
No 158
>KOG1274 consensus WD40 repeat protein [General function prediction only]
Probab=99.84 E-value=1.1e-18 Score=162.02 Aligned_cols=242 Identities=16% Similarity=0.187 Sum_probs=179.5
Q ss_pred ccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCC
Q 036314 62 GHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDC 141 (347)
Q Consensus 62 ~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg 141 (347)
+|++..+.|.+.+++ .+|++++.||.||+|+..... +.++ ++.-|...|.+++. ++..|++|+.++
T Consensus 11 aht~G~t~i~~d~~g----efi~tcgsdg~ir~~~~~sd~-----e~P~---ti~~~g~~v~~ia~--~s~~f~~~s~~~ 76 (933)
T KOG1274|consen 11 AHTGGLTLICYDPDG----EFICTCGSDGDIRKWKTNSDE-----EEPE---TIDISGELVSSIAC--YSNHFLTGSEQN 76 (933)
T ss_pred hccCceEEEEEcCCC----CEEEEecCCCceEEeecCCcc-----cCCc---hhhccCceeEEEee--cccceEEeeccc
Confidence 677778889988854 379999999999999976531 1111 22226777877764 456999999999
Q ss_pred cEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeC-CCCeEEEEecCCcEEEEECCCCcee
Q 036314 142 TISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP-QQETIYSASWDHSVRTWDVEMGKDL 220 (347)
Q Consensus 142 ~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~l~s~s~dg~v~vwd~~~~~~~ 220 (347)
+|.+|....+.... .+...+-+++.+++. +|.+++.||.|-.|++-++.+....
T Consensus 77 tv~~y~fps~~~~~-------------------------iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~ 131 (933)
T KOG1274|consen 77 TVLRYKFPSGEEDT-------------------------ILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQE 131 (933)
T ss_pred eEEEeeCCCCCccc-------------------------eeeeeeccceEEEEecCCcEEEeecCceeEEEEeccccchh
Confidence 99999887654321 122234567888875 6789999999999999999887776
Q ss_pred eeeee-CeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEe----cCC-CCCeeEEEeCCCCCeEEEEEeCC
Q 036314 221 SDIFC-GKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQF----SSH-NSWISACKWHNKSWFHLISASYD 294 (347)
Q Consensus 221 ~~~~~-~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~----~~h-~~~v~~v~~s~~~~~~l~s~s~D 294 (347)
..+.. ..++.+++++|. +.++|+.+-||+|++||+....-...+.-+ .-. ...+..++|+|+++. |+..+.|
T Consensus 132 ~~lrgh~apVl~l~~~p~-~~fLAvss~dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~-la~~~~d 209 (933)
T KOG1274|consen 132 KVLRGHDAPVLQLSYDPK-GNFLAVSSCDGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGT-LAVPPVD 209 (933)
T ss_pred eeecccCCceeeeeEcCC-CCEEEEEecCceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCe-EEeeccC
Confidence 66654 457999999765 568999999999999999753211111111 111 234577899999875 7778889
Q ss_pred CcEEEEEcCCCccceeecC--CCCeEEEEeecC-CCEEEEccCCceEEEeecc
Q 036314 295 GKVMLWDLRTAWPLSVIDS--HKDKVLCADWWR-GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 295 ~~i~lwd~~~~~~~~~~~~--h~~~v~~~~~~~-~~~l~s~s~D~~v~vw~~~ 344 (347)
+.|++|+...++....+.. |...+.++.|+| |.|||+++.||-|.||+.-
T Consensus 210 ~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~~g~I~vWnv~ 262 (933)
T KOG1274|consen 210 NTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNGKYIAASTLDGQILVWNVD 262 (933)
T ss_pred CeEEEEccCCceeheeecccccccceEEEEEcCCCcEEeeeccCCcEEEEecc
Confidence 9999999998887777643 334478899985 9999999999999999864
No 159
>KOG1009 consensus Chromatin assembly complex 1 subunit B/CAC2 (contains WD40 repeats) [Chromatin structure and dynamics; Replication, recombination and repair]
Probab=99.84 E-value=5.6e-19 Score=150.26 Aligned_cols=284 Identities=21% Similarity=0.310 Sum_probs=197.6
Q ss_pred CCceeeccCC-CC-CEEEEEecCCeEEEEcC-----CC-----eEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCc
Q 036314 24 DDWVSAVDGS-NP-GFILTGCYDNLGRVWKA-----GG-----VCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQT 91 (347)
Q Consensus 24 ~~~v~~~~~~-~~-~~l~sg~~d~~i~iw~~-----~~-----~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~ 91 (347)
..+|..+.|- ++ +.|||||.|..||+|.. .+ .....|..|+..|+.+.|+|.+. .||||+++|+
T Consensus 13 ~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~ge----lLASg~D~g~ 88 (434)
T KOG1009|consen 13 HEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGE----LLASGGDGGE 88 (434)
T ss_pred CCceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcC----eeeecCCCce
Confidence 3667888876 33 38999999999999964 12 12456889999999999999553 7999999999
Q ss_pred EEEEeccccc-------cccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeecc
Q 036314 92 LRLWKFDAEE-------LVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRK 164 (347)
Q Consensus 92 v~~wd~~~~~-------~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~ 164 (347)
|.+|...... .....+.+...+.+++|...|..++|++++.++++++.|.++++||+..+
T Consensus 89 v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G------------- 155 (434)
T KOG1009|consen 89 VFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAG------------- 155 (434)
T ss_pred EEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEeccc-------------
Confidence 9999876211 11112346667788999999999999999999999999999999999764
Q ss_pred CCCccccccccccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeee-------------------
Q 036314 165 GNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIF------------------- 224 (347)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~------------------- 224 (347)
.....+..|...+..++| |-++++++-+.|+..+.+.+.....+....
T Consensus 156 ------------~l~~~~~dh~~yvqgvawDpl~qyv~s~s~dr~~~~~~~~~~~~~~~~~~~~m~~~~~~~~e~~s~rL 223 (434)
T KOG1009|consen 156 ------------QLLAILDDHEHYVQGVAWDPLNQYVASKSSDRHPEGFSAKLKQVIKRHGLDIMPAKAFNEREGKSTRL 223 (434)
T ss_pred ------------eeEeeccccccccceeecchhhhhhhhhccCcccceeeeeeeeeeeeeeeeEeeecccCCCCcceeee
Confidence 345567788899999999 567788888888877776654433222111
Q ss_pred -eCe----eeEEEEeeCCCCcEEEEecC---------CCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCC------
Q 036314 225 -CGK----ALNCIDIGGEGSALIAAGGS---------DPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKS------ 284 (347)
Q Consensus 225 -~~~----~~~~~~~~~~~~~~la~~~~---------d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~------ 284 (347)
+.. -...+.|.|++ .++++... -+..++|+-.. ..+|...+.+....+..++|+|--
T Consensus 224 fhDeTlksFFrRlsfTPdG-~llvtPag~~~~g~~~~~n~tYvfsrk~--l~rP~~~lp~~~k~~lavr~~pVy~elrp~ 300 (434)
T KOG1009|consen 224 FHDETLKSFFRRLSFTPDG-SLLVTPAGLFKVGGGVFRNTSYVFSRKD--LKRPAARLPSPKKPALAVRFSPVYYELRPL 300 (434)
T ss_pred eecCchhhhhhhcccCCCC-cEEEcccceeeeCCceeeceeEeecccc--ccCceeecCCCCcceEEEEeeeeEEEeccc
Confidence 110 11234565443 45444211 13445665332 234566777777777777776531
Q ss_pred -----------CeEEEEEeCCCcEEEEEcCCCccceee-cCCCCeEEEEeecC-CCEEEEccCCceEEE
Q 036314 285 -----------WFHLISASYDGKVMLWDLRTAWPLSVI-DSHKDKVLCADWWR-GDSVISGGVDSKLCV 340 (347)
Q Consensus 285 -----------~~~l~s~s~D~~i~lwd~~~~~~~~~~-~~h~~~v~~~~~~~-~~~l~s~s~D~~v~v 340 (347)
+..+|.++. ..|.+||..+.+++... .-|-..++.++|++ |..|+..|.||-+.+
T Consensus 301 ~~~~~~~~lpyrlvfaiAt~-~svyvydtq~~~P~~~v~nihy~~iTDiaws~dg~~l~vSS~DGyCS~ 368 (434)
T KOG1009|consen 301 SSEKFLFVLPYRLVFAIATK-NSVYVYDTQTLEPLAVVDNIHYSAITDIAWSDDGSVLLVSSTDGFCSL 368 (434)
T ss_pred cccccccccccceEEEEeec-ceEEEeccccccceEEEeeeeeeeecceeecCCCcEEEEeccCCceEE
Confidence 112344443 57999999988887755 34778999999984 777888899987644
No 160
>KOG1034 consensus Transcriptional repressor EED/ESC/FIE, required for transcriptional silencing, WD repeat superfamily [Transcription]
Probab=99.84 E-value=5.5e-19 Score=146.59 Aligned_cols=290 Identities=18% Similarity=0.208 Sum_probs=198.4
Q ss_pred CCCcCCceeeccCC------CCCEEEEEecCCeEEEEcCC--C--eEEEE-ee-ccCCceEEEEEeecCCCceEEEEEcc
Q 036314 20 PSLHDDWVSAVDGS------NPGFILTGCYDNLGRVWKAG--G--VCTHI-LE-GHCGAVSSVNIIKSDGLKYVTVATAS 87 (347)
Q Consensus 20 ~~~h~~~v~~~~~~------~~~~l~sg~~d~~i~iw~~~--~--~~~~~-l~-~h~~~V~~v~~~~~~~~~~~~l~s~s 87 (347)
...|+..|-.++|. ..+.+||.|.+ ++.+|.-. + ..++. .. .|......++|+-+.....-+||.|+
T Consensus 34 ~ed~~~~I~gv~fN~~~~~~e~~vfatvG~~-rvtiy~c~~d~~ir~lq~y~D~d~~Esfytcsw~yd~~~~~p~la~~G 112 (385)
T KOG1034|consen 34 KEDHNKPIFGVAFNSFLGCDEPQVFATVGGN-RVTIYECPGDGGIRLLQSYADEDHDESFYTCSWSYDSNTGNPFLAAGG 112 (385)
T ss_pred hccCCCccceeeeehhcCCCCCceEEEeCCc-EEEEEEECCccceeeeeeccCCCCCcceEEEEEEecCCCCCeeEEeec
Confidence 44688889988864 23577777654 67777643 2 12222 22 37778888999875543345788888
Q ss_pred CCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCC-CEEEEeeCCCcEEEEecCCCCCCCccceeeeccCC
Q 036314 88 KDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSG-NMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGN 166 (347)
Q Consensus 88 ~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~-~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~ 166 (347)
.-|.||+.|+.++++ ...+.+|...|+.+.|.|+. ++++++|.|.+||+|++++..+.
T Consensus 113 ~~GvIrVid~~~~~~---------~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv------------ 171 (385)
T KOG1034|consen 113 YLGVIRVIDVVSGQC---------SKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCV------------ 171 (385)
T ss_pred ceeEEEEEecchhhh---------ccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEE------------
Confidence 999999999987654 34678999999999999986 68899999999999999875331
Q ss_pred CccccccccccccccccCCccceEEEEeC-CCCeEEEEecCCcEEEEECCCCceeeeeee--------------------
Q 036314 167 NQVEEPQLEGEAISTLVGHTQCVSSVVWP-QQETIYSASWDHSVRTWDVEMGKDLSDIFC-------------------- 225 (347)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~-------------------- 225 (347)
-.+.-+.||.+.|.++-|+ ++.+|+|++.|.++++|++...+-...+..
T Consensus 172 ----------~VfGG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~f 241 (385)
T KOG1034|consen 172 ----------AVFGGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHF 241 (385)
T ss_pred ----------EEecccccccCcEEEEEEcCCCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCcccccc
Confidence 0123457899999999985 788999999999999999974322111110
Q ss_pred ---------CeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCC-C------CCCC----eEEecCCCCCeeEE--EeCCC
Q 036314 226 ---------GKALNCIDIGGEGSALIAAGGSDPILRIWDPRKP-G------TSAP----VFQFSSHNSWISAC--KWHNK 283 (347)
Q Consensus 226 ---------~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~-~------~~~~----~~~~~~h~~~v~~v--~~s~~ 283 (347)
...+.|+.|- +.++++-+-++.|..|-+.+- + ++.. ..++.-....|+-+ +|+|-
T Consensus 242 p~fst~diHrnyVDCvrw~---gd~ilSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~ 318 (385)
T KOG1034|consen 242 PDFSTTDIHRNYVDCVRWF---GDFILSKSCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDPW 318 (385)
T ss_pred ccccccccccchHHHHHHH---hhheeecccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecHH
Confidence 0111222221 236777778899999976211 1 1111 12222223334444 44554
Q ss_pred CCeEEEEEeCCCcEEEEEcCCCccce--eecCC--CCeEEEEeec-CCCEEEEccCCceEEEeeccc
Q 036314 284 SWFHLISASYDGKVMLWDLRTAWPLS--VIDSH--KDKVLCADWW-RGDSVISGGVDSKLCVSSGVS 345 (347)
Q Consensus 284 ~~~~l~s~s~D~~i~lwd~~~~~~~~--~~~~h--~~~v~~~~~~-~~~~l~s~s~D~~v~vw~~~~ 345 (347)
. .+||.|...|.|.+||++..++.. ++..+ ...|+-.+|+ +|..|+....|++|.-|+-++
T Consensus 319 ~-~~la~gnq~g~v~vwdL~~~ep~~~ttl~~s~~~~tVRQ~sfS~dgs~lv~vcdd~~Vwrwdrv~ 384 (385)
T KOG1034|consen 319 Q-KMLALGNQSGKVYVWDLDNNEPPKCTTLTHSKSGSTVRQTSFSRDGSILVLVCDDGTVWRWDRVS 384 (385)
T ss_pred H-HHHhhccCCCcEEEEECCCCCCccCceEEeccccceeeeeeecccCcEEEEEeCCCcEEEEEeec
Confidence 4 368999999999999999876632 33222 3568888998 677888999999999998654
No 161
>KOG0644 consensus Uncharacterized conserved protein, contains WD40 repeat and BROMO domains [General function prediction only]
Probab=99.83 E-value=2.5e-20 Score=171.03 Aligned_cols=276 Identities=21% Similarity=0.337 Sum_probs=198.1
Q ss_pred CCCcCCceeeccCC-CCCEEEEEecCCeEEEEcCC-CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEec
Q 036314 20 PSLHDDWVSAVDGS-NPGFILTGCYDNLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKF 97 (347)
Q Consensus 20 ~~~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~-~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~ 97 (347)
+.+|.+.|.|+.|. .+.+++||+.|..++||... +.|++...||++.++.++.+.. ..+++++|.|..||+|.+
T Consensus 186 LlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~----n~~iaaaS~D~vIrvWrl 261 (1113)
T KOG0644|consen 186 LLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSN----NTMIAAASNDKVIRVWRL 261 (1113)
T ss_pred HHhhhhheeeeeeccccceEeecCccceeeeeeccchhhhccCCCCccccchhccchh----hhhhhhcccCceEEEEec
Confidence 55899999999997 57799999999999999864 6789999999999999998763 247899999999999999
Q ss_pred cccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecC-CCCCCCccceeeeccCCCccccccccc
Q 036314 98 DAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTN-DSDAAGNQVSIKKRKGNNQVEEPQLEG 176 (347)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (347)
..+. ++..+.+|+++|++++|+|-. +.+.||++++||.. .... -... -.
T Consensus 262 ~~~~---------pvsvLrghtgavtaiafsP~~----sss~dgt~~~wd~r~~~~~--y~pr-----------p~---- 311 (1113)
T KOG0644|consen 262 PDGA---------PVSVLRGHTGAVTAIAFSPRA----SSSDDGTCRIWDARLEPRI--YVPR-----------PL---- 311 (1113)
T ss_pred CCCc---------hHHHHhccccceeeeccCccc----cCCCCCceEeccccccccc--cCCC-----------CC----
Confidence 8764 455789999999999999964 78999999999976 1100 0000 00
Q ss_pred cccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEe
Q 036314 177 EAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWD 255 (347)
Q Consensus 177 ~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd 255 (347)
.+.+ .+-+.++.+ ..+..+++++.|+.-..|.......-. ..+.-+...++-....+++-.+-.+++|+
T Consensus 312 ----~~~~-~~~~~s~~~~~~~~~f~Tgs~d~ea~n~e~~~l~~~~-----~~lif~t~ssd~~~~~~~ar~~~~~~vwn 381 (1113)
T KOG0644|consen 312 ----KFTE-KDLVDSILFENNGDRFLTGSRDGEARNHEFEQLAWRS-----NLLIFVTRSSDLSSIVVTARNDHRLCVWN 381 (1113)
T ss_pred ----Cccc-ccceeeeeccccccccccccCCcccccchhhHhhhhc-----cceEEEeccccccccceeeeeeeEeeeee
Confidence 0000 122333433 456678999999998888764321110 00111111122223445556677888998
Q ss_pred CCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceee-cCCCCeEEEEeec-CCCEEEEcc
Q 036314 256 PRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVI-DSHKDKVLCADWW-RGDSVISGG 333 (347)
Q Consensus 256 ~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~-~~h~~~v~~~~~~-~~~~l~s~s 333 (347)
+-.. .....+.+|.+++..+.++|-+.....+++.||.+.|||+-.|.+++.. .+| +++....|| +|+.++-..
T Consensus 382 l~~g---~l~H~l~ghsd~~yvLd~Hpfn~ri~msag~dgst~iwdi~eg~pik~y~~gh-~kl~d~kFSqdgts~~lsd 457 (1113)
T KOG0644|consen 382 LYTG---QLLHNLMGHSDEVYVLDVHPFNPRIAMSAGYDGSTIIWDIWEGIPIKHYFIGH-GKLVDGKFSQDGTSIALSD 457 (1113)
T ss_pred cccc---hhhhhhcccccceeeeeecCCCcHhhhhccCCCceEeeecccCCcceeeeccc-ceeeccccCCCCceEecCC
Confidence 7642 2356778999999999999999888889999999999999999888765 455 566666998 566666655
Q ss_pred CCceEEEeec
Q 036314 334 VDSKLCVSSG 343 (347)
Q Consensus 334 ~D~~v~vw~~ 343 (347)
.-|.+.|-..
T Consensus 458 ~hgql~i~g~ 467 (1113)
T KOG0644|consen 458 DHGQLYILGT 467 (1113)
T ss_pred CCCceEEecc
Confidence 5666666543
No 162
>KOG0290 consensus Conserved WD40 repeat-containing protein AN11 [Function unknown]
Probab=99.83 E-value=2.4e-18 Score=140.67 Aligned_cols=280 Identities=20% Similarity=0.251 Sum_probs=190.6
Q ss_pred eeeccCC----CCCEEEEEec----CCeEEEEcC---CCeEEE-EeeccCCceEEEEEeecCC-CceEEEEEccCCCcEE
Q 036314 27 VSAVDGS----NPGFILTGCY----DNLGRVWKA---GGVCTH-ILEGHCGAVSSVNIIKSDG-LKYVTVATASKDQTLR 93 (347)
Q Consensus 27 v~~~~~~----~~~~l~sg~~----d~~i~iw~~---~~~~~~-~l~~h~~~V~~v~~~~~~~-~~~~~l~s~s~Dg~v~ 93 (347)
+-+++++ ...+||-||. .+.|.|-.+ .+..+. .-..|.-+++.+.|.|+.. ..-..|||+++ .+|
T Consensus 47 lya~~Ws~~~~~~~rla~gS~~Ee~~Nkvqiv~ld~~s~e~~~~a~fd~~YP~tK~~wiPd~~g~~pdlLATs~D--~LR 124 (364)
T KOG0290|consen 47 LYAMNWSVRPDKKFRLAVGSFIEEYNNKVQIVQLDEDSGELVEDANFDHPYPVTKLMWIPDSKGVYPDLLATSSD--FLR 124 (364)
T ss_pred eeeeccccCCCcceeEEEeeeccccCCeeEEEEEccCCCceeccCCCCCCCCccceEecCCccccCcchhhcccC--eEE
Confidence 4455555 2348999985 456766643 233222 1236889999999998652 12234555443 799
Q ss_pred EEeccccccccCccccceeeeeeccccceEEEEEeC-CCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccc
Q 036314 94 LWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAET-SGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEP 172 (347)
Q Consensus 94 ~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~-~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (347)
+|.+...+-....+..-....-..|.+++++..|+. +-+++.++|-|-|..|||++.+..
T Consensus 125 lWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~------------------- 185 (364)
T KOG0290|consen 125 LWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVS------------------- 185 (364)
T ss_pred EEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecccCeEEEEEEeeccc-------------------
Confidence 999874221000000000011234677888888865 447899999999999999986411
Q ss_pred cccccccccccCCccceEEEEeCC--CCeEEEEecCCcEEEEECCCCceeeeeee----CeeeEEEEeeCCCCcEEEEe-
Q 036314 173 QLEGEAISTLVGHTQCVSSVVWPQ--QETIYSASWDHSVRTWDVEMGKDLSDIFC----GKALNCIDIGGEGSALIAAG- 245 (347)
Q Consensus 173 ~~~~~~~~~~~~h~~~v~~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~~----~~~~~~~~~~~~~~~~la~~- 245 (347)
+.....+..|.+.|..++|.. -+.++|++.||.+|++|++.-+.-.-+.. ..+.-.+++...+.+++|+-
T Consensus 186 ---~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~ 262 (364)
T KOG0290|consen 186 ---GTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFA 262 (364)
T ss_pred ---cceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHHhhhh
Confidence 122346778999999999975 35699999999999999987542211221 23455677777777777664
Q ss_pred cCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCc------cceeecCCCCeEE
Q 036314 246 GSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAW------PLSVIDSHKDKVL 319 (347)
Q Consensus 246 ~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~------~~~~~~~h~~~v~ 319 (347)
.....|.|.|+|.+. .++..+.+|...|+.++|.|....+|.||+.|..+.+||+...- ++-.+. -+++|.
T Consensus 263 ~dS~~V~iLDiR~P~--tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~~~~~dPilay~-a~~EVN 339 (364)
T KOG0290|consen 263 MDSNKVVILDIRVPC--TPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPRENGEDPILAYT-AGGEVN 339 (364)
T ss_pred cCCceEEEEEecCCC--cceehhhcCcccccceEecCCCCceeeecCCcceEEEEecccccccCCCCchhhhh-ccceee
Confidence 445789999999764 46889999999999999999999999999999999999997531 222233 356889
Q ss_pred EEeecC--CCEEEEcc
Q 036314 320 CADWWR--GDSVISGG 333 (347)
Q Consensus 320 ~~~~~~--~~~l~s~s 333 (347)
-+.|++ ++.++-+.
T Consensus 340 qi~Ws~~~~Dwiai~~ 355 (364)
T KOG0290|consen 340 QIQWSSSQPDWIAICF 355 (364)
T ss_pred eeeecccCCCEEEEEe
Confidence 999974 55666655
No 163
>KOG0303 consensus Actin-binding protein Coronin, contains WD40 repeats [Cytoskeleton]
Probab=99.83 E-value=1e-18 Score=148.26 Aligned_cols=203 Identities=18% Similarity=0.243 Sum_probs=146.7
Q ss_pred cCCCCCcCCceeeccCC--CCCEEEEEecCCeEEEEcCC--C------eEEEEeeccCCceEEEEEeecCCCceEEEEEc
Q 036314 17 EEEPSLHDDWVSAVDGS--NPGFILTGCYDNLGRVWKAG--G------VCTHILEGHCGAVSSVNIIKSDGLKYVTVATA 86 (347)
Q Consensus 17 ~~~~~~h~~~v~~~~~~--~~~~l~sg~~d~~i~iw~~~--~------~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~ 86 (347)
.....||++.|..+++. +++.|||||.|.+|+||++. + ..+..|.||+..|..|.|+|... ..|+|+
T Consensus 74 ~P~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~---NVLlsa 150 (472)
T KOG0303|consen 74 YPLVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAP---NVLLSA 150 (472)
T ss_pred CCCccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccch---hhHhhc
Confidence 33456999999999976 67899999999999999863 1 34678999999999999999654 378999
Q ss_pred cCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCC
Q 036314 87 SKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGN 166 (347)
Q Consensus 87 s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~ 166 (347)
+.|.+|.+|++.+++. +-++. |.+-|.++.|+.||.++++.+.|..|||||...+..
T Consensus 151 g~Dn~v~iWnv~tgea---------li~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~------------- 207 (472)
T KOG0303|consen 151 GSDNTVSIWNVGTGEA---------LITLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTV------------- 207 (472)
T ss_pred cCCceEEEEeccCCce---------eeecC-CCCeEEEEEeccCCceeeeecccceeEEEcCCCCcE-------------
Confidence 9999999999998763 23444 999999999999999999999999999999876432
Q ss_pred CccccccccccccccccCCcc--ceEEEEeCCCCeEEEEe----cCCcEEEEECCCCcee---eeeeeCeeeEEEEeeCC
Q 036314 167 NQVEEPQLEGEAISTLVGHTQ--CVSSVVWPQQETIYSAS----WDHSVRTWDVEMGKDL---SDIFCGKALNCIDIGGE 237 (347)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~h~~--~v~~~~~~~~~~l~s~s----~dg~v~vwd~~~~~~~---~~~~~~~~~~~~~~~~~ 237 (347)
+..-.+|.+ +.+.+...++. +++.+ .++.+.+||...-+.. ..+..++.+.---+.++
T Consensus 208 ------------v~e~~~heG~k~~Raifl~~g~-i~tTGfsr~seRq~aLwdp~nl~eP~~~~elDtSnGvl~PFyD~d 274 (472)
T KOG0303|consen 208 ------------VSEGVAHEGAKPARAIFLASGK-IFTTGFSRMSERQIALWDPNNLEEPIALQELDTSNGVLLPFYDPD 274 (472)
T ss_pred ------------eeecccccCCCcceeEEeccCc-eeeeccccccccceeccCcccccCcceeEEeccCCceEEeeecCC
Confidence 222234443 23434334555 55554 4567999987543322 22222333322223344
Q ss_pred CCcEEEEecCCCcEEEEeCCC
Q 036314 238 GSALIAAGGSDPILRIWDPRK 258 (347)
Q Consensus 238 ~~~~la~~~~d~~i~iwd~~~ 258 (347)
.+-+.+.|-.|+.||.|.+..
T Consensus 275 t~ivYl~GKGD~~IRYyEit~ 295 (472)
T KOG0303|consen 275 TSIVYLCGKGDSSIRYFEITN 295 (472)
T ss_pred CCEEEEEecCCcceEEEEecC
Confidence 444456777899999999864
No 164
>KOG0650 consensus WD40 repeat nucleolar protein Bop1, involved in ribosome biogenesis [Translation, ribosomal structure and biogenesis]
Probab=99.83 E-value=1e-18 Score=155.26 Aligned_cols=269 Identities=21% Similarity=0.307 Sum_probs=183.5
Q ss_pred eEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCC-E
Q 036314 55 VCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGN-M 133 (347)
Q Consensus 55 ~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~-~ 133 (347)
.|...+.||++.|.+|...+.+ ..|++|+.||+||||.+.++.++ .++. ..+.|.||+|+|.++ .
T Consensus 391 ~~~lvyrGHtg~Vr~iSvdp~G----~wlasGsdDGtvriWEi~TgRcv---------r~~~-~d~~I~~vaw~P~~~~~ 456 (733)
T KOG0650|consen 391 RCALVYRGHTGLVRSISVDPSG----EWLASGSDDGTVRIWEIATGRCV---------RTVQ-FDSEIRSVAWNPLSDLC 456 (733)
T ss_pred eeeeeEeccCCeEEEEEecCCc----ceeeecCCCCcEEEEEeecceEE---------EEEe-ecceeEEEEecCCCCce
Confidence 4566799999999999998843 47999999999999999988643 3332 356799999999875 3
Q ss_pred EEEeeCCCcEEEEecCCCCC--CC-ccceeeeccCCCc----cccc------cccccccccccCCccceEEEEeC-CCCe
Q 036314 134 VCSGSWDCTISLWRTNDSDA--AG-NQVSIKKRKGNNQ----VEEP------QLEGEAISTLVGHTQCVSSVVWP-QQET 199 (347)
Q Consensus 134 l~sgs~Dg~I~iwd~~~~~~--~~-~~~~~~~~~~~~~----~~~~------~~~~~~~~~~~~h~~~v~~~~~~-~~~~ 199 (347)
++.+..+..+.|-+..-+.. .+ ..-.......... +..+ +.... ++....|.+.|..+.|+ .|.+
T Consensus 457 vLAvA~~~~~~ivnp~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~-v~~~I~~~k~i~~vtWHrkGDY 535 (733)
T KOG0650|consen 457 VLAVAVGECVLIVNPIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKG-VCIVIKHPKSIRQVTWHRKGDY 535 (733)
T ss_pred eEEEEecCceEEeCccccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccc-eEEEEecCCccceeeeecCCce
Confidence 34444454566654321100 00 0000000000000 0000 00111 23344578889999995 7889
Q ss_pred EEEEecC---CcEEEEECCCCceeeeee-eCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCe
Q 036314 200 IYSASWD---HSVRTWDVEMGKDLSDIF-CGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWI 275 (347)
Q Consensus 200 l~s~s~d---g~v~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v 275 (347)
|++...+ ..|.|+++........+. ....+.++.|+|....+|++. ...|+|||+.+. ..+..+.....+|
T Consensus 536 latV~~~~~~~~VliHQLSK~~sQ~PF~kskG~vq~v~FHPs~p~lfVaT--q~~vRiYdL~kq---elvKkL~tg~kwi 610 (733)
T KOG0650|consen 536 LATVMPDSGNKSVLIHQLSKRKSQSPFRKSKGLVQRVKFHPSKPYLFVAT--QRSVRIYDLSKQ---ELVKKLLTGSKWI 610 (733)
T ss_pred EEEeccCCCcceEEEEecccccccCchhhcCCceeEEEecCCCceEEEEe--ccceEEEehhHH---HHHHHHhcCCeee
Confidence 9887654 468889987654443332 234578899988776665543 578999998752 2244455566789
Q ss_pred eEEEeCCCCCeEEEEEeCCCcEEEEEcCCC-ccceeecCCCCeEEEEeecCC-CEEEEccCCceEEEeecc
Q 036314 276 SACKWHNKSWFHLISASYDGKVMLWDLRTA-WPLSVIDSHKDKVLCADWWRG-DSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 276 ~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~-~~~~~~~~h~~~v~~~~~~~~-~~l~s~s~D~~v~vw~~~ 344 (347)
..++.+|.|.. |+.++.|+.+..+|+.-+ ++.+++..|...|++|+|++. ..||||+.||++.|+=|.
T Consensus 611 S~msihp~GDn-li~gs~d~k~~WfDldlsskPyk~lr~H~~avr~Va~H~ryPLfas~sdDgtv~Vfhg~ 680 (733)
T KOG0650|consen 611 SSMSIHPNGDN-LILGSYDKKMCWFDLDLSSKPYKTLRLHEKAVRSVAFHKRYPLFASGSDDGTVIVFHGM 680 (733)
T ss_pred eeeeecCCCCe-EEEecCCCeeEEEEcccCcchhHHhhhhhhhhhhhhhccccceeeeecCCCcEEEEeee
Confidence 99999998876 888999999999999754 678889999999999999864 379999999999998653
No 165
>KOG1188 consensus WD40 repeat protein [General function prediction only]
Probab=99.82 E-value=5e-19 Score=147.52 Aligned_cols=192 Identities=18% Similarity=0.295 Sum_probs=137.8
Q ss_pred EEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeC--CCCEEEEeeCCCcEEEEecCCCCCCCccce
Q 036314 82 TVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAET--SGNMVCSGSWDCTISLWRTNDSDAAGNQVS 159 (347)
Q Consensus 82 ~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~--~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~ 159 (347)
.+|++-..|+||+||..+++ .+..+.+|...++.++|.. ....+.+++.||+||+||++.....
T Consensus 42 ~vav~lSngsv~lyd~~tg~---------~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~----- 107 (376)
T KOG1188|consen 42 AVAVSLSNGSVRLYDKGTGQ---------LLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAES----- 107 (376)
T ss_pred eEEEEecCCeEEEEeccchh---------hhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhh-----
Confidence 47788888999999988765 3456778888888898865 4578999999999999999864321
Q ss_pred eeeccCCCccccccccccccccccCCc-cceEEEEeC-CCCeEEEE----ecCCcEEEEECCCCce-eeeee--eCeeeE
Q 036314 160 IKKRKGNNQVEEPQLEGEAISTLVGHT-QCVSSVVWP-QQETIYSA----SWDHSVRTWDVEMGKD-LSDIF--CGKALN 230 (347)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~-~~~~l~s~----s~dg~v~vwd~~~~~~-~~~~~--~~~~~~ 230 (347)
....+.+|. .+..++... .++.+++| ..|-.|.+||+|..+. +..+. +...++
T Consensus 108 ------------------a~~~~~~~~~~~f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT 169 (376)
T KOG1188|consen 108 ------------------ARISWTQQSGTPFICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVT 169 (376)
T ss_pred ------------------hheeccCCCCCcceEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcce
Confidence 112223333 233444433 33445544 2344688999998766 55444 344799
Q ss_pred EEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCC
Q 036314 231 CIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTA 305 (347)
Q Consensus 231 ~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~ 305 (347)
++.|+|.+.+++++|+-||-|.+||+..+....++...-.|.+.|.++.|..++...|.+-+...+..+|+++.+
T Consensus 170 ~lrFHP~~pnlLlSGSvDGLvnlfD~~~d~EeDaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~ 244 (376)
T KOG1188|consen 170 QLRFHPSDPNLLLSGSVDGLVNLFDTKKDNEEDALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDG 244 (376)
T ss_pred eEEecCCCCCeEEeecccceEEeeecCCCcchhhHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEccCC
Confidence 999999999999999999999999998654433444444577778888898887556777777888888877654
No 166
>KOG1007 consensus WD repeat protein TSSC1, WD repeat superfamily [Function unknown]
Probab=99.82 E-value=1.2e-18 Score=142.28 Aligned_cols=234 Identities=19% Similarity=0.348 Sum_probs=163.0
Q ss_pred cCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEE-EEeeCC-------CcEEEEecCCCCCCCccc
Q 036314 87 SKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMV-CSGSWD-------CTISLWRTNDSDAAGNQV 158 (347)
Q Consensus 87 s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l-~sgs~D-------g~I~iwd~~~~~~~~~~~ 158 (347)
-.|++|.+-+++.+.- ....+.|..|-+.|..++-+|..+.+ +|+-.| ..+.||.++.......
T Consensus 37 K~dNqVhll~~d~e~s------~l~skvf~h~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~-- 108 (370)
T KOG1007|consen 37 KEDNQVHLLRLDSEGS------ELLSKVFFHHAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSN-- 108 (370)
T ss_pred CCcceeEEEEecCccc------hhhhhhhhcCCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCccc--
Confidence 3567788777764321 11224567788899999888876544 444221 3477898865321100
Q ss_pred eeeeccCCCcccccccccccccccc-CCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCcee-eeeee------Ceee
Q 036314 159 SIKKRKGNNQVEEPQLEGEAISTLV-GHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDL-SDIFC------GKAL 229 (347)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~-~~~~~------~~~~ 229 (347)
..+-+++..+. .+-+.|.++.| |++..+++.. |..|.+|++..+..+ ..+.. ....
T Consensus 109 --------------~~tlE~v~~Ldteavg~i~cvew~Pns~klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~f 173 (370)
T KOG1007|consen 109 --------------SSTLECVASLDTEAVGKINCVEWEPNSDKLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSF 173 (370)
T ss_pred --------------cchhhHhhcCCHHHhCceeeEEEcCCCCeeEEec-cCceEEEEcccCcchheeeccccccccccee
Confidence 00112233333 34457899998 7788888876 889999999876552 22221 1234
Q ss_pred EEEEeeC-CCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCC-cc
Q 036314 230 NCIDIGG-EGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTA-WP 307 (347)
Q Consensus 230 ~~~~~~~-~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~-~~ 307 (347)
..-.++| .+++.+++. .|+++..||+|.... ....-..|...|.++.|+|+..+.||||+.||.|++||.|.. .+
T Consensus 174 tsg~WspHHdgnqv~tt-~d~tl~~~D~RT~~~--~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~p 250 (370)
T KOG1007|consen 174 TSGAWSPHHDGNQVATT-SDSTLQFWDLRTMKK--NNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFP 250 (370)
T ss_pred cccccCCCCccceEEEe-CCCcEEEEEccchhh--hcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCcc
Confidence 4556665 456666654 589999999985332 222335788999999999999999999999999999999874 66
Q ss_pred ceeecCCCCeEEEEeecC--CCEEEEccCCceEEEeecccC
Q 036314 308 LSVIDSHKDKVLCADWWR--GDSVISGGVDSKLCVSSGVSI 346 (347)
Q Consensus 308 ~~~~~~h~~~v~~~~~~~--~~~l~s~s~D~~v~vw~~~~~ 346 (347)
++.+.+|.--|++|.|+| ++.+.|||.|..|.+|--.||
T Consensus 251 v~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca~sv 291 (370)
T KOG1007|consen 251 VQELPGHSHWVWAVRFNPEHDQLILSGGSDSAVNLSCASSV 291 (370)
T ss_pred ccccCCCceEEEEEEecCccceEEEecCCCceeEEEecccc
Confidence 889999999999999986 678999999999999976654
No 167
>KOG0322 consensus G-protein beta subunit-like protein GNB1L, contains WD repeats [General function prediction only]
Probab=99.81 E-value=1.1e-18 Score=140.76 Aligned_cols=270 Identities=16% Similarity=0.236 Sum_probs=177.4
Q ss_pred EEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeee-ccccceEEEEEeCCCCEEE
Q 036314 57 THILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILR-GHKASVHSIAAETSGNMVC 135 (347)
Q Consensus 57 ~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~-~h~~~V~~v~~s~~~~~l~ 135 (347)
...|.+|.+.|+++-|-..+ +|.+|..-|.|++|++++.. ....++ .|...|+.+..-|+ ..+.
T Consensus 7 ~fvLRp~~~~v~s~~fqa~~-----rL~sg~~~G~V~~w~lqt~r---------~~~~~r~~g~~~it~lq~~p~-d~l~ 71 (323)
T KOG0322|consen 7 FFVLRPHSSSVTSVLFQANE-----RLMSGLSVGIVKMWVLQTER---------DLPLIRLFGRLFITNLQSIPN-DSLD 71 (323)
T ss_pred eeEeccccchheehhhccch-----hhhcccccceEEEEEeecCc---------cchhhhhhccceeeceeecCC-cchh
Confidence 34677999999999886533 48899999999999998754 233455 46778888876665 6788
Q ss_pred EeeCCCcEEEEecCCCCCCCcc-----------ceeeeccCCC-c-ccccc--------cc-ccccccc------cCCcc
Q 036314 136 SGSWDCTISLWRTNDSDAAGNQ-----------VSIKKRKGNN-Q-VEEPQ--------LE-GEAISTL------VGHTQ 187 (347)
Q Consensus 136 sgs~Dg~I~iwd~~~~~~~~~~-----------~~~~~~~~~~-~-~~~~~--------~~-~~~~~~~------~~h~~ 187 (347)
+-++|+.+.+|++......... .+......+. . ...+. .+ +...+.. .+..+
T Consensus 72 tqgRd~~L~lw~ia~s~~i~i~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~Klg 151 (323)
T KOG0322|consen 72 TQGRDPLLILWTIAYSAFISIHSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSERSKLG 151 (323)
T ss_pred hcCCCceEEEEEccCcceEEEeeeeccccccccceeccCCCcchhheecCCcccchhhhhccCccceeEccCchhccccC
Confidence 8999999999998753211000 0000000000 0 00000 00 0000110 11223
Q ss_pred ceEEEEeC--CCC--eEEEEecCCcEEEEECCCCceeeeee-----------eCeeeEEEEeeCCCCcEEEEecCCCcEE
Q 036314 188 CVSSVVWP--QQE--TIYSASWDHSVRTWDVEMGKDLSDIF-----------CGKALNCIDIGGEGSALIAAGGSDPILR 252 (347)
Q Consensus 188 ~v~~~~~~--~~~--~l~s~s~dg~v~vwd~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~la~~~~d~~i~ 252 (347)
.+.+..++ .+. .++.|..+|.+.+||+.++..+..+. +..++..+++.+.- ..=++|+.+..+.
T Consensus 152 svmc~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~-~rGisgga~dkl~ 230 (323)
T KOG0322|consen 152 SVMCQDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSC-DRGISGGADDKLV 230 (323)
T ss_pred ceeeeeccccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhh-cCCcCCCccccce
Confidence 44454443 233 36788999999999999875443332 12356666665321 1225677888899
Q ss_pred EEeCCCCCCCCC-eEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeecCC-CEEE
Q 036314 253 IWDPRKPGTSAP-VFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRG-DSVI 330 (347)
Q Consensus 253 iwd~~~~~~~~~-~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~~-~~l~ 330 (347)
.|.+.......+ .....-.+-.|..+..-||+. .|||++.|++||||..++..++..+..|.+.|.+++|+|+ ..||
T Consensus 231 ~~Sl~~s~gslq~~~e~~lknpGv~gvrIRpD~K-IlATAGWD~RiRVyswrtl~pLAVLkyHsagvn~vAfspd~~lmA 309 (323)
T KOG0322|consen 231 MYSLNHSTGSLQIRKEITLKNPGVSGVRIRPDGK-ILATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPDCELMA 309 (323)
T ss_pred eeeeccccCcccccceEEecCCCccceEEccCCc-EEeecccCCcEEEEEeccCCchhhhhhhhcceeEEEeCCCCchhh
Confidence 998864311111 112222334577788889985 6999999999999999999999999999999999999987 6899
Q ss_pred EccCCceEEEeec
Q 036314 331 SGGVDSKLCVSSG 343 (347)
Q Consensus 331 s~s~D~~v~vw~~ 343 (347)
++|+|++|.+|..
T Consensus 310 aaskD~rISLWkL 322 (323)
T KOG0322|consen 310 AASKDARISLWKL 322 (323)
T ss_pred hccCCceEEeeec
Confidence 9999999999973
No 168
>KOG2048 consensus WD40 repeat protein [General function prediction only]
Probab=99.81 E-value=2.5e-17 Score=148.51 Aligned_cols=239 Identities=18% Similarity=0.254 Sum_probs=179.3
Q ss_pred cCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeecc-ccceEEEEEeCCCCEEEEeeCCC
Q 036314 63 HCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGH-KASVHSIAAETSGNMVCSGSWDC 141 (347)
Q Consensus 63 h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h-~~~V~~v~~s~~~~~l~sgs~Dg 141 (347)
-...|.+++++.+.+ .||.+-.||.|.+|++..+= -....+.++ ...|-+++|. ++..|+|.+.+|
T Consensus 24 ~Ps~I~slA~s~kS~----~lAvsRt~g~IEiwN~~~~w--------~~~~vi~g~~drsIE~L~W~-e~~RLFS~g~sg 90 (691)
T KOG2048|consen 24 KPSEIVSLAYSHKSN----QLAVSRTDGNIEIWNLSNNW--------FLEPVIHGPEDRSIESLAWA-EGGRLFSSGLSG 90 (691)
T ss_pred eccceEEEEEeccCC----ceeeeccCCcEEEEccCCCc--------eeeEEEecCCCCceeeEEEc-cCCeEEeecCCc
Confidence 346689999998654 58999999999999987542 223345555 4558899999 566788999999
Q ss_pred cEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCcee
Q 036314 142 TISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDL 220 (347)
Q Consensus 142 ~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~ 220 (347)
+|.-||+.+.. ..+.+......|++++. |.+..++.|+.||.+..++...+...
T Consensus 91 ~i~EwDl~~lk-------------------------~~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~ 145 (691)
T KOG2048|consen 91 SITEWDLHTLK-------------------------QKYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKIT 145 (691)
T ss_pred eEEEEecccCc-------------------------eeEEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEE
Confidence 99999987642 23334444567888886 55667888889997777777666544
Q ss_pred eeeee---CeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeE--EecC----CCCCeeEEEeCCCCCeEEEEE
Q 036314 221 SDIFC---GKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVF--QFSS----HNSWISACKWHNKSWFHLISA 291 (347)
Q Consensus 221 ~~~~~---~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~--~~~~----h~~~v~~v~~s~~~~~~l~s~ 291 (347)
..... ...+-+++|.+.+ ..+++|+.||.|++||...+... .+. .+.+ ..--|+++.|-.++ .|++|
T Consensus 146 ~~r~l~rq~sRvLslsw~~~~-~~i~~Gs~Dg~Iriwd~~~~~t~-~~~~~~~d~l~k~~~~iVWSv~~Lrd~--tI~sg 221 (691)
T KOG2048|consen 146 YKRSLMRQKSRVLSLSWNPTG-TKIAGGSIDGVIRIWDVKSGQTL-HIITMQLDRLSKREPTIVWSVLFLRDS--TIASG 221 (691)
T ss_pred EEeecccccceEEEEEecCCc-cEEEecccCceEEEEEcCCCceE-EEeeecccccccCCceEEEEEEEeecC--cEEEe
Confidence 33322 2467889997654 46899999999999998764321 111 1111 22247888888776 59999
Q ss_pred eCCCcEEEEEcCCCccceeecCCCCeEEEEeecC-CCEEEEccCCceEEEeec
Q 036314 292 SYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKLCVSSG 343 (347)
Q Consensus 292 s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~D~~v~vw~~ 343 (347)
..-|+|++||...+..++.+..|.+.|.|++-.+ ++++.++|.|+.|.-++-
T Consensus 222 DS~G~V~FWd~~~gTLiqS~~~h~adVl~Lav~~~~d~vfsaGvd~~ii~~~~ 274 (691)
T KOG2048|consen 222 DSAGTVTFWDSIFGTLIQSHSCHDADVLALAVADNEDRVFSAGVDPKIIQYSL 274 (691)
T ss_pred cCCceEEEEcccCcchhhhhhhhhcceeEEEEcCCCCeEEEccCCCceEEEEe
Confidence 9999999999999999999999999999999875 589999999999887654
No 169
>KOG0307 consensus Vesicle coat complex COPII, subunit SEC31 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.81 E-value=5.7e-19 Score=167.54 Aligned_cols=232 Identities=17% Similarity=0.344 Sum_probs=174.1
Q ss_pred CEEEEEecCCeEEEEcCCC-------eEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccc
Q 036314 36 GFILTGCYDNLGRVWKAGG-------VCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKK 108 (347)
Q Consensus 36 ~~l~sg~~d~~i~iw~~~~-------~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~ 108 (347)
++||.|..||.|-+||... ..+..+..|++.|..+.|.+..+ ..||+|++||+|-|||+...+....+.
T Consensus 81 GlIaGG~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~---nlLASGa~~geI~iWDlnn~~tP~~~~- 156 (1049)
T KOG0307|consen 81 GLIAGGLEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQG---NLLASGADDGEILIWDLNKPETPFTPG- 156 (1049)
T ss_pred ceeeccccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCC---ceeeccCCCCcEEEeccCCcCCCCCCC-
Confidence 5899999999999999632 23566788999999999988654 479999999999999997643111100
Q ss_pred cceeeeeeccccceEEEEEeCCC-CEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCC--
Q 036314 109 IRSFKILRGHKASVHSIAAETSG-NMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGH-- 185 (347)
Q Consensus 109 ~~~~~~~~~h~~~V~~v~~s~~~-~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h-- 185 (347)
-..-.+.|.+++|+..- ..|+|++.+|.+-|||++..+. +-.+..|
T Consensus 157 ------~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~p-------------------------ii~ls~~~~ 205 (1049)
T KOG0307|consen 157 ------SQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKP-------------------------IIKLSDTPG 205 (1049)
T ss_pred ------CCCCcccceEeccchhhhHHhhccCCCCCceeccccCCCc-------------------------ccccccCCC
Confidence 11235679999998764 6788999999999999975421 1111111
Q ss_pred ccceEEEEeCC-C-CeEEEEecCC---cEEEEECCCCc-eeeeee-eCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCC
Q 036314 186 TQCVSSVVWPQ-Q-ETIYSASWDH---SVRTWDVEMGK-DLSDIF-CGKALNCIDIGGEGSALIAAGGSDPILRIWDPRK 258 (347)
Q Consensus 186 ~~~v~~~~~~~-~-~~l~s~s~dg---~v~vwd~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~ 258 (347)
...+..+.|+. + ..++.++.|. .|.+||+|... .++.+. +...+.+++|++.+..++++++.|+.|..|+...
T Consensus 206 ~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~t 285 (1049)
T KOG0307|consen 206 RMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNT 285 (1049)
T ss_pred ccceeeeeeCCCCceeeeeecCCCCCceeEeecccccCCchhhhcccccceeeeccCCCCchhhhcccCCCCeeEecCCC
Confidence 13467788853 2 3566666665 48999998643 334443 3457889999998888999999999999999875
Q ss_pred CCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCC
Q 036314 259 PGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTA 305 (347)
Q Consensus 259 ~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~ 305 (347)
. ..+..+....+|+..+.|+|..+..++.++.||.|-|+.+...
T Consensus 286 g---Evl~~~p~~~nW~fdv~w~pr~P~~~A~asfdgkI~I~sl~~~ 329 (1049)
T KOG0307|consen 286 G---EVLGELPAQGNWCFDVQWCPRNPSVMAAASFDGKISIYSLQGT 329 (1049)
T ss_pred c---eEeeecCCCCcceeeeeecCCCcchhhhheeccceeeeeeecC
Confidence 3 2366777788999999999999888999999999999998754
No 170
>KOG1334 consensus WD40 repeat protein [General function prediction only]
Probab=99.81 E-value=8.3e-19 Score=152.43 Aligned_cols=294 Identities=18% Similarity=0.223 Sum_probs=209.4
Q ss_pred CCCCcCCceeeccCC-CCCEEEEEecCCeEEEEcC-CCe-EEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEE
Q 036314 19 EPSLHDDWVSAVDGS-NPGFILTGCYDNLGRVWKA-GGV-CTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLW 95 (347)
Q Consensus 19 ~~~~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~-~~~-~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~w 95 (347)
.+.+|.+.|.+|.|. .+..|+|||.|.+|.+||- .+. .+..-.||...|....|.|..+ ...+++++.||+||+=
T Consensus 137 kL~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~--d~ti~~~s~dgqvr~s 214 (559)
T KOG1334|consen 137 KLNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSG--DRTIVTSSRDGQVRVS 214 (559)
T ss_pred cccCCCCccceeeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCC--CcCceeccccCceeee
Confidence 367899999999987 5789999999999999995 343 3444568999999999998554 2468999999999998
Q ss_pred eccccccccCccccceeeeeeccccceEEEEEeCCC-CEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccc
Q 036314 96 KFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSG-NMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQL 174 (347)
Q Consensus 96 d~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~-~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (347)
.+..... .+..+.+..|.++|+.++.-|+. .-|.|++.|+.++-.|+..........
T Consensus 215 ~i~~t~~------~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~---------------- 272 (559)
T KOG1334|consen 215 EILETGY------VENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFV---------------- 272 (559)
T ss_pred eeccccc------eecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceee----------------
Confidence 7654321 12234466799999999998876 578899999999999987643221110
Q ss_pred cccccccccCCcc---ceEEEEe-C-CCCeEEEEecCCcEEEEECCCCce------eeee-----e--eCeeeEEEEeeC
Q 036314 175 EGEAISTLVGHTQ---CVSSVVW-P-QQETIYSASWDHSVRTWDVEMGKD------LSDI-----F--CGKALNCIDIGG 236 (347)
Q Consensus 175 ~~~~~~~~~~h~~---~v~~~~~-~-~~~~l~s~s~dg~v~vwd~~~~~~------~~~~-----~--~~~~~~~~~~~~ 236 (347)
+-..+.. ....++. | +...+++++.|..+++||.+.-.. +.++ . ....++|+.++.
T Consensus 273 ------cr~~~~~~~v~L~~Ia~~P~nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh 346 (559)
T KOG1334|consen 273 ------CREADEKERVGLYTIAVDPRNTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSH 346 (559)
T ss_pred ------eeccCCccceeeeeEecCCCCccccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecC
Confidence 1111111 2344554 3 334689999999999999864321 1111 1 122478899876
Q ss_pred CCCcEEEEecCCCcEEEEeCCCCCC----------CCCeEEecCCCC--CeeEEEeCCCCCeEEEEEeCCCcEEEEEcCC
Q 036314 237 EGSALIAAGGSDPILRIWDPRKPGT----------SAPVFQFSSHNS--WISACKWHNKSWFHLISASYDGKVMLWDLRT 304 (347)
Q Consensus 237 ~~~~~la~~~~d~~i~iwd~~~~~~----------~~~~~~~~~h~~--~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~ 304 (347)
.++.++|+ -.|-.|++|......- ....+.+.||.+ .|..+-|-.....+++|||.=|.|.|||-.+
T Consensus 347 ~~sElLaS-YnDe~IYLF~~~~~~G~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t 425 (559)
T KOG1334|consen 347 DGSELLAS-YNDEDIYLFNKSMGDGSEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKT 425 (559)
T ss_pred Cccceeee-ecccceEEeccccccCCCCCCCcchhhccchhhcccccccccceeeeccCccceEEecCccceEEEEecch
Confidence 66666665 4688899995432111 111123788876 4677776543345799999999999999999
Q ss_pred CccceeecCCCCeEEEEeecC-CCEEEEccCCceEEEeec
Q 036314 305 AWPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKLCVSSG 343 (347)
Q Consensus 305 ~~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~D~~v~vw~~ 343 (347)
++.+.-+++-...|.|+.=+| .-.|||+|.|.-|+||.-
T Consensus 426 ~eii~~MegDr~VVNCLEpHP~~PvLAsSGid~DVKIWTP 465 (559)
T KOG1334|consen 426 GEIIRFMEGDRHVVNCLEPHPHLPVLASSGIDHDVKIWTP 465 (559)
T ss_pred hHHHHHhhcccceEeccCCCCCCchhhccCCccceeeecC
Confidence 998888887666888999777 457999999999999973
No 171
>KOG2919 consensus Guanine nucleotide-binding protein [General function prediction only]
Probab=99.80 E-value=3.7e-17 Score=135.63 Aligned_cols=280 Identities=18% Similarity=0.214 Sum_probs=186.3
Q ss_pred eeeccCC-CCCEEEEEecCCeEEEEcCCCeE-------------EEEee-ccCCceEEEEEee---cCCCceEEEEEccC
Q 036314 27 VSAVDGS-NPGFILTGCYDNLGRVWKAGGVC-------------THILE-GHCGAVSSVNIIK---SDGLKYVTVATASK 88 (347)
Q Consensus 27 v~~~~~~-~~~~l~sg~~d~~i~iw~~~~~~-------------~~~l~-~h~~~V~~v~~~~---~~~~~~~~l~s~s~ 88 (347)
......+ +|..|++-+.|..+++|+++... .-.++ ...+.|..-.|-+ ....+..++++.+.
T Consensus 52 ~kgckWSPDGSciL~~sedn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~l~a~ssr 131 (406)
T KOG2919|consen 52 LKGCKWSPDGSCILSLSEDNCLNCWNLPFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSRMKSDQPSTNLFAVSSR 131 (406)
T ss_pred hccceeCCCCceEEeecccCeeeEEecChhhcccCCCCccccccceeEEeccCCEEEEEEeeeccccCCCccceeeeccc
Confidence 3344556 45689999999999999863110 00111 1123455544431 11112346788999
Q ss_pred CCcEEEEeccccccccCccccceeeeeeccccc---eEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccC
Q 036314 89 DQTLRLWKFDAEELVNHPKKIRSFKILRGHKAS---VHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKG 165 (347)
Q Consensus 89 Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~---V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~ 165 (347)
|.-|++||..++++-.. .....|.+. ..+++|+|||.+|+ ++....||++|+..+........
T Consensus 132 ~~PIh~wdaftG~lraS-------y~~ydh~de~taAhsL~Fs~DGeqlf-aGykrcirvFdt~RpGr~c~vy~------ 197 (406)
T KOG2919|consen 132 DQPIHLWDAFTGKLRAS-------YRAYDHQDEYTAAHSLQFSPDGEQLF-AGYKRCIRVFDTSRPGRDCPVYT------ 197 (406)
T ss_pred cCceeeeeccccccccc-------hhhhhhHHhhhhheeEEecCCCCeEe-ecccceEEEeeccCCCCCCcchh------
Confidence 99999999988865321 112234444 36899999999998 56788999999865422111100
Q ss_pred CCccccccccccccccccCCccceEEEEeC--CCCeEEEEecCCcEEEEECCCCceeeeeee-CeeeEEEEeeCCCCcEE
Q 036314 166 NNQVEEPQLEGEAISTLVGHTQCVSSVVWP--QQETIYSASWDHSVRTWDVEMGKDLSDIFC-GKALNCIDIGGEGSALI 242 (347)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l 242 (347)
+...-..+..+.+.+++|+ +.+.++.+++..++-||.-....++..+.. +..++.+.+++++..++
T Consensus 198 -----------t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~edGn~lf 266 (406)
T KOG2919|consen 198 -----------TVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCEDGNKLF 266 (406)
T ss_pred -----------hhhcccccccceeeeeeccCCCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEEeccCcCeec
Confidence 0001122345678888884 455799999999999987665566555543 34789999988776555
Q ss_pred EEecCCCcEEEEeCCCCCCCCCeEEecCCCC-CeeEEEe--CCCCCeEEEEEeCCCcEEEEEcCC-CccceeecCCCCeE
Q 036314 243 AAGGSDPILRIWDPRKPGTSAPVFQFSSHNS-WISACKW--HNKSWFHLISASYDGKVMLWDLRT-AWPLSVIDSHKDKV 318 (347)
Q Consensus 243 a~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~-~v~~v~~--s~~~~~~l~s~s~D~~i~lwd~~~-~~~~~~~~~h~~~v 318 (347)
.-+-.|.+|-.||+|... .++..+..|.. .=..|-| .|++. +|++|+.||.|++||+++ +..+..+..|.+.|
T Consensus 267 sGaRk~dkIl~WDiR~~~--~pv~~L~rhv~~TNQRI~FDld~~~~-~LasG~tdG~V~vwdlk~~gn~~sv~~~~sd~v 343 (406)
T KOG2919|consen 267 SGARKDDKILCWDIRYSR--DPVYALERHVGDTNQRILFDLDPKGE-ILASGDTDGSVRVWDLKDLGNEVSVTGNYSDTV 343 (406)
T ss_pred ccccCCCeEEEEeehhcc--chhhhhhhhccCccceEEEecCCCCc-eeeccCCCccEEEEecCCCCCcccccccccccc
Confidence 444458899999999743 34667777765 3334444 57774 699999999999999998 67788888899999
Q ss_pred EEEeecC-CCEEEEccC
Q 036314 319 LCADWWR-GDSVISGGV 334 (347)
Q Consensus 319 ~~~~~~~-~~~l~s~s~ 334 (347)
..|+++| -..+|++|.
T Consensus 344 NgvslnP~mpilatssG 360 (406)
T KOG2919|consen 344 NGVSLNPIMPILATSSG 360 (406)
T ss_pred cceecCcccceeeeccC
Confidence 9999987 445676654
No 172
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.80 E-value=7.2e-16 Score=140.66 Aligned_cols=281 Identities=30% Similarity=0.488 Sum_probs=205.7
Q ss_pred CCCcCCceeeccCCC-CCEEEEEec-CCeEEEEcCC-CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEe
Q 036314 20 PSLHDDWVSAVDGSN-PGFILTGCY-DNLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWK 96 (347)
Q Consensus 20 ~~~h~~~v~~~~~~~-~~~l~sg~~-d~~i~iw~~~-~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd 96 (347)
...|...|..+++++ +.++++++. |+.+++|+.. +..+..+.+|...|.+++|+|.+. ..+++++.|+.|++||
T Consensus 151 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---~~~~~~~~d~~i~~wd 227 (466)
T COG2319 151 LEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGG---LLIASGSSDGTIRLWD 227 (466)
T ss_pred EecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEEcCCcc---eEEEEecCCCcEEEEE
Confidence 558999999999885 448888885 9999999976 577788889999999999996443 2456669999999998
Q ss_pred ccccccccCccccceee-eeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccc
Q 036314 97 FDAEELVNHPKKIRSFK-ILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLE 175 (347)
Q Consensus 97 ~~~~~~~~~~~~~~~~~-~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (347)
...+. ... .+.+|...+ ...|++++..+++++.|+.+++|++.....
T Consensus 228 ~~~~~---------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~---------------------- 275 (466)
T COG2319 228 LSTGK---------LLRSTLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSS---------------------- 275 (466)
T ss_pred CCCCc---------EEeeecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeecCCCc----------------------
Confidence 76332 223 467788775 448999998999999999999999875321
Q ss_pred ccccccccCCccceEEEEeC-CCCeEEEEecCCcEEEEECCCCceeeeee--eCe-eeEEEEeeCCCCcEEEEe-cCCCc
Q 036314 176 GEAISTLVGHTQCVSSVVWP-QQETIYSASWDHSVRTWDVEMGKDLSDIF--CGK-ALNCIDIGGEGSALIAAG-GSDPI 250 (347)
Q Consensus 176 ~~~~~~~~~h~~~v~~~~~~-~~~~l~s~s~dg~v~vwd~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~la~~-~~d~~ 250 (347)
....+.+|...+.++.|. ++..+++++.|+.+++||.+......... ... .+..+.+ .++...++.+ ..|+.
T Consensus 276 --~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~~ 352 (466)
T COG2319 276 --LLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSF-SPDGSLLVSGGSDDGT 352 (466)
T ss_pred --EEEEEecCCccEEEEEECCCCCEEEEeeCCCcEEEEEcCCCceEEEeeecccCCceEEEEE-CCCCCEEEEeecCCCc
Confidence 011225677888888884 57778889999899999998776555443 222 4677777 5442344444 67899
Q ss_pred EEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEE-EeCCCcEEEEEcCCCccceeecCCCCeEEEEeecC-CCE
Q 036314 251 LRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLIS-ASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDS 328 (347)
Q Consensus 251 i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s-~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~ 328 (347)
+.+|+..... .......+. .+..+.+.+ . ....+ +..++.+.+|+............+...+....+.+ +..
T Consensus 353 ~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (466)
T COG2319 353 IRLWDLRTGK---PLKTLEGHS-NVLSVSFSP-D-GRVVSSGSTDGTVRLWDLSTGSLLRNLDGHTSRVTSLDFSPDGKS 426 (466)
T ss_pred EEeeecCCCc---eeEEecCCc-eEEEEEECC-C-CCEEEEecCCCceEEEecccCeeeeeccCCCCcEEEEEECCCCcE
Confidence 9999987532 222322222 278899988 6 44555 78999999999998766655554436777778864 667
Q ss_pred EEEccCCceEEEeecc
Q 036314 329 VISGGVDSKLCVSSGV 344 (347)
Q Consensus 329 l~s~s~D~~v~vw~~~ 344 (347)
+++++.++++++|...
T Consensus 427 ~~~~~~~~~~~~~~~~ 442 (466)
T COG2319 427 LASGSSDNTIRLWDLK 442 (466)
T ss_pred EEEecCCCcEEEEecc
Confidence 8888999999999754
No 173
>KOG0290 consensus Conserved WD40 repeat-containing protein AN11 [Function unknown]
Probab=99.79 E-value=4e-18 Score=139.35 Aligned_cols=254 Identities=19% Similarity=0.265 Sum_probs=176.2
Q ss_pred ceEEEEEeecCCCceEEEEEccC----CCcEEEEecc--ccccccCccccceeeeeeccccceEEEEEeCCCC-----EE
Q 036314 66 AVSSVNIIKSDGLKYVTVATASK----DQTLRLWKFD--AEELVNHPKKIRSFKILRGHKASVHSIAAETSGN-----MV 134 (347)
Q Consensus 66 ~V~~v~~~~~~~~~~~~l~s~s~----Dg~v~~wd~~--~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~-----~l 134 (347)
.+.++.|+.... ....||.||. .+.|.+-.+. +++++. ... ..|.-+++.+-|.|+.. +|
T Consensus 46 ~lya~~Ws~~~~-~~~rla~gS~~Ee~~Nkvqiv~ld~~s~e~~~-------~a~-fd~~YP~tK~~wiPd~~g~~pdlL 116 (364)
T KOG0290|consen 46 PLYAMNWSVRPD-KKFRLAVGSFIEEYNNKVQIVQLDEDSGELVE-------DAN-FDHPYPVTKLMWIPDSKGVYPDLL 116 (364)
T ss_pred ceeeeccccCCC-cceeEEEeeeccccCCeeEEEEEccCCCceec-------cCC-CCCCCCccceEecCCccccCcchh
Confidence 467888874322 2345777764 3456666654 222211 112 35888999999998863 45
Q ss_pred EEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeC--CCCeEEEEecCCcEEEE
Q 036314 135 CSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP--QQETIYSASWDHSVRTW 212 (347)
Q Consensus 135 ~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~l~s~s~dg~v~vw 212 (347)
||. +-.+|+|.+...+.......... ...-..+..+++++-|. +..+|.+.|-|-++.||
T Consensus 117 ATs--~D~LRlWri~~ee~~~~~~~~L~----------------~~kns~~~aPlTSFDWne~dp~~igtSSiDTTCTiW 178 (364)
T KOG0290|consen 117 ATS--SDFLRLWRIGDEESRVELQSVLN----------------NNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIW 178 (364)
T ss_pred hcc--cCeEEEEeccCcCCceehhhhhc----------------cCcccccCCcccccccccCCcceeEeecccCeEEEE
Confidence 443 34799999874321110000000 00012244577778885 55789999999999999
Q ss_pred ECCCCce--ee--eeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEE
Q 036314 213 DVEMGKD--LS--DIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHL 288 (347)
Q Consensus 213 d~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l 288 (347)
|++++.. ++ -+-+.+++..++|...+..+||+.|.||.+|+||+|..+...-+..-.........++|++.+.+++
T Consensus 179 die~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnym 258 (364)
T KOG0290|consen 179 DIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYM 258 (364)
T ss_pred EEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHH
Confidence 9998732 22 2345678999999887788999999999999999997654322222222245678899999998889
Q ss_pred EEEeCCC-cEEEEEcCCC-ccceeecCCCCeEEEEeecCC--CEEEEccCCceEEEeecccC
Q 036314 289 ISASYDG-KVMLWDLRTA-WPLSVIDSHKDKVLCADWWRG--DSVISGGVDSKLCVSSGVSI 346 (347)
Q Consensus 289 ~s~s~D~-~i~lwd~~~~-~~~~~~~~h~~~v~~~~~~~~--~~l~s~s~D~~v~vw~~~~~ 346 (347)
|+-..|+ .|.|.|+|.. .++..+++|++.|.+++|.|+ ..|+|+|.|.-+.+|+..|+
T Consensus 259 ATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~ 320 (364)
T KOG0290|consen 259 ATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQM 320 (364)
T ss_pred hhhhcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCceeeecCCcceEEEEecccc
Confidence 9988764 7999999975 567899999999999999874 46999999999999998754
No 174
>KOG0649 consensus WD40 repeat protein [General function prediction only]
Probab=99.79 E-value=2e-16 Score=126.48 Aligned_cols=267 Identities=19% Similarity=0.208 Sum_probs=177.0
Q ss_pred cCC-CCCEEEEEecCCeEEEEcC----------CCe-EEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEecc
Q 036314 31 DGS-NPGFILTGCYDNLGRVWKA----------GGV-CTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFD 98 (347)
Q Consensus 31 ~~~-~~~~l~sg~~d~~i~iw~~----------~~~-~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~ 98 (347)
+.+ ..++|+.|..+|+|-+..+ +|+ .+..+++|.++|..++|.. .+|++|+ ||.|+-|...
T Consensus 17 a~sp~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~d------~~Lls~g-dG~V~gw~W~ 89 (325)
T KOG0649|consen 17 AISPSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFHD------DFLLSGG-DGLVYGWEWN 89 (325)
T ss_pred hhCCcceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeeeh------hheeecc-CceEEEeeeh
Confidence 344 3579999999999999854 122 3345689999999999974 2466655 5999999875
Q ss_pred ccccccCcc----ccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccc
Q 036314 99 AEELVNHPK----KIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQL 174 (347)
Q Consensus 99 ~~~~~~~~~----~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (347)
...-....+ ...+.++-.-.-..|+++...|..+-++.++-|+.+.-||++++
T Consensus 90 E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G----------------------- 146 (325)
T KOG0649|consen 90 EEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDG----------------------- 146 (325)
T ss_pred hhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEecCC-----------------------
Confidence 332110000 00111110011245788888888777777779999999999874
Q ss_pred cccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeeeeCe-----------eeEEEEeeCCCCcEE
Q 036314 175 EGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGK-----------ALNCIDIGGEGSALI 242 (347)
Q Consensus 175 ~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~l 242 (347)
+..++++||++.+.++.- .....++||+.||++|+||+++++.+..+...+ =+.+++.+ ...+
T Consensus 147 --~i~r~~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~~---edWl 221 (325)
T KOG0649|consen 147 --RIQREYRGHTDYVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAVN---EDWL 221 (325)
T ss_pred --EEEEEEcCCcceeeeeeecccCcceeecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEEEecc---CceE
Confidence 446789999999999986 456789999999999999999999887765321 13344442 2344
Q ss_pred EEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEe
Q 036314 243 AAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCAD 322 (347)
Q Consensus 243 a~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~ 322 (347)
+ ++...++.+|.++..+ +..++.+. ..+..|.|-.+ .+++++....|.-|.+.. ..-.......-.+++..
T Consensus 222 v-CGgGp~lslwhLrsse-~t~vfpip---a~v~~v~F~~d---~vl~~G~g~~v~~~~l~G-vl~a~ip~~s~~c~s~s 292 (325)
T KOG0649|consen 222 V-CGGGPKLSLWHLRSSE-STCVFPIP---ARVHLVDFVDD---CVLIGGEGNHVQSYTLNG-VLQANIPVESTACYSAS 292 (325)
T ss_pred E-ecCCCceeEEeccCCC-ceEEEecc---cceeEeeeecc---eEEEeccccceeeeeecc-EEEEeccCCccceeeec
Confidence 4 4557899999998643 22344443 35667778644 478888888999998863 32233333333567777
Q ss_pred ec--CCCEEEEccCCceEEEe
Q 036314 323 WW--RGDSVISGGVDSKLCVS 341 (347)
Q Consensus 323 ~~--~~~~l~s~s~D~~v~vw 341 (347)
|+ |=+.|-.++....+.|.
T Consensus 293 ~~~~p~k~~s~ag~s~~~~i~ 313 (325)
T KOG0649|consen 293 WQTSPIKFISIAGFSNKLHIL 313 (325)
T ss_pred ccCCceEEEEecccceeeeee
Confidence 75 43345555666666553
No 175
>KOG0644 consensus Uncharacterized conserved protein, contains WD40 repeat and BROMO domains [General function prediction only]
Probab=99.78 E-value=6.9e-19 Score=161.71 Aligned_cols=234 Identities=21% Similarity=0.318 Sum_probs=174.9
Q ss_pred EeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEee
Q 036314 59 ILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGS 138 (347)
Q Consensus 59 ~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs 138 (347)
.|.||-..|.|+.|.. .+.++++|++|.-||||.++++. ++...+||++.|+.++.+.++.+++++|
T Consensus 185 rLlgH~naVyca~fDr----tg~~Iitgsdd~lvKiwS~et~~---------~lAs~rGhs~ditdlavs~~n~~iaaaS 251 (1113)
T KOG0644|consen 185 RLLGHRNAVYCAIFDR----TGRYIITGSDDRLVKIWSMETAR---------CLASCRGHSGDITDLAVSSNNTMIAAAS 251 (1113)
T ss_pred HHHhhhhheeeeeecc----ccceEeecCccceeeeeeccchh---------hhccCCCCccccchhccchhhhhhhhcc
Confidence 4668999999998876 44689999999999999988765 4456789999999999999999999999
Q ss_pred CCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeCCCCeEEEEecCCcEEEEECCCCc
Q 036314 139 WDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGK 218 (347)
Q Consensus 139 ~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~dg~v~vwd~~~~~ 218 (347)
.|..|++|.+.++ ..+..+.+|+++|++++|++-. +.+.||++++||.+-.-
T Consensus 252 ~D~vIrvWrl~~~-------------------------~pvsvLrghtgavtaiafsP~~---sss~dgt~~~wd~r~~~ 303 (1113)
T KOG0644|consen 252 NDKVIRVWRLPDG-------------------------APVSVLRGHTGAVTAIAFSPRA---SSSDDGTCRIWDARLEP 303 (1113)
T ss_pred cCceEEEEecCCC-------------------------chHHHHhccccceeeeccCccc---cCCCCCceEeccccccc
Confidence 9999999998764 4567889999999999996533 88999999999987211
Q ss_pred eee-----eeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeC
Q 036314 219 DLS-----DIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASY 293 (347)
Q Consensus 219 ~~~-----~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~ 293 (347)
.+. .......+..+.+ ......+++++.|+.-..|..... ..+...+.-+.++.+-....+++-.
T Consensus 304 ~~y~prp~~~~~~~~~~s~~~-~~~~~~f~Tgs~d~ea~n~e~~~l---------~~~~~~lif~t~ssd~~~~~~~ar~ 373 (1113)
T KOG0644|consen 304 RIYVPRPLKFTEKDLVDSILF-ENNGDRFLTGSRDGEARNHEFEQL---------AWRSNLLIFVTRSSDLSSIVVTARN 373 (1113)
T ss_pred cccCCCCCCcccccceeeeec-cccccccccccCCcccccchhhHh---------hhhccceEEEeccccccccceeeee
Confidence 110 0111112223333 334446788999998888865421 1222222222222232234677778
Q ss_pred CCcEEEEEcCCCccceeecCCCCeEEEEeecC--CCEEEEccCCceEEEeec
Q 036314 294 DGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR--GDSVISGGVDSKLCVSSG 343 (347)
Q Consensus 294 D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~--~~~l~s~s~D~~v~vw~~ 343 (347)
+-.+.+|++.+|..++.+.+|.+.++.+.++| .....+++.||...||+.
T Consensus 374 ~~~~~vwnl~~g~l~H~l~ghsd~~yvLd~Hpfn~ri~msag~dgst~iwdi 425 (1113)
T KOG0644|consen 374 DHRLCVWNLYTGQLLHNLMGHSDEVYVLDVHPFNPRIAMSAGYDGSTIIWDI 425 (1113)
T ss_pred eeEeeeeecccchhhhhhcccccceeeeeecCCCcHhhhhccCCCceEeeec
Confidence 88999999999999999999999999999986 335779999999999984
No 176
>KOG1517 consensus Guanine nucleotide binding protein MIP1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.77 E-value=8.2e-17 Score=151.65 Aligned_cols=283 Identities=18% Similarity=0.207 Sum_probs=179.0
Q ss_pred eeccCCC-CCEEEEEecCCeEEEEcCC-CeEEEEeeccC---CceEEEEEeecCCCceEEEEEccCCCcEEEEecccccc
Q 036314 28 SAVDGSN-PGFILTGCYDNLGRVWKAG-GVCTHILEGHC---GAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEEL 102 (347)
Q Consensus 28 ~~~~~~~-~~~l~sg~~d~~i~iw~~~-~~~~~~l~~h~---~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~ 102 (347)
..+.|.+ ...++++.....|++||-+ +.+...|..+. ..|+.+.+.-.. +..+|++|+.||.||||+--...
T Consensus 1068 k~~~~hpf~p~i~~ad~r~~i~vwd~e~~~~l~~F~n~~~~~t~Vs~l~liNe~--D~aLlLtas~dGvIRIwk~y~~~- 1144 (1387)
T KOG1517|consen 1068 KTLKFHPFEPQIAAADDRERIRVWDWEKGRLLNGFDNGAFPDTRVSDLELINEQ--DDALLLTASSDGVIRIWKDYADK- 1144 (1387)
T ss_pred ceeeecCCCceeEEcCCcceEEEEecccCceeccccCCCCCCCccceeeeeccc--chhheeeeccCceEEEecccccc-
Confidence 3444542 3467777666789999964 66655555443 468888877543 33578999999999999732110
Q ss_pred ccCccccceee---eeecc----ccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccc
Q 036314 103 VNHPKKIRSFK---ILRGH----KASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLE 175 (347)
Q Consensus 103 ~~~~~~~~~~~---~~~~h----~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (347)
.++.+.+. .+.++ .+.=.-++|......|+++|.-..|+|||........
T Consensus 1145 ---~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~~~-------------------- 1201 (1387)
T KOG1517|consen 1145 ---WKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSIRIWDAHKEQVVA-------------------- 1201 (1387)
T ss_pred ---cCCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCeeEEEEEecccceeEe--------------------
Confidence 01111111 11222 1111224676666666666668899999987532110
Q ss_pred ccccccccCCccceEEEEe--CCCCeEEEEecCCcEEEEECCCCce---eeeeee-C--eeeEEEEeeCCCCcEEEEecC
Q 036314 176 GEAISTLVGHTQCVSSVVW--PQQETIYSASWDHSVRTWDVEMGKD---LSDIFC-G--KALNCIDIGGEGSALIAAGGS 247 (347)
Q Consensus 176 ~~~~~~~~~h~~~v~~~~~--~~~~~l~s~s~dg~v~vwd~~~~~~---~~~~~~-~--~~~~~~~~~~~~~~~la~~~~ 247 (347)
....+....++++.- ..++.++.|-.||.|++||.+.... +..... . .++..+.+.+.+-..+++|+.
T Consensus 1202 ----diP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~ 1277 (1387)
T KOG1517|consen 1202 ----DIPYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQ 1277 (1387)
T ss_pred ----ecccCCCccceeecccccCCceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeecc
Confidence 011112334555543 3568899999999999999986533 222221 2 236666665544446889999
Q ss_pred CCcEEEEeCCCCCCCCCeEEecCCC---CCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecC-------CCCe
Q 036314 248 DPILRIWDPRKPGTSAPVFQFSSHN---SWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDS-------HKDK 317 (347)
Q Consensus 248 d~~i~iwd~~~~~~~~~~~~~~~h~---~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~-------h~~~ 317 (347)
||.|++||+|..... ...+...|- +.++++..++..+ .+|+|+. +.|+||++.. +.+..+.. ..+.
T Consensus 1278 ~G~I~~~DlR~~~~e-~~~~iv~~~~yGs~lTal~VH~hap-iiAsGs~-q~ikIy~~~G-~~l~~~k~n~~F~~q~~gs 1353 (1387)
T KOG1517|consen 1278 DGDIQLLDLRMSSKE-TFLTIVAHWEYGSALTALTVHEHAP-IIASGSA-QLIKIYSLSG-EQLNIIKYNPGFMGQRIGS 1353 (1387)
T ss_pred CCeEEEEecccCccc-ccceeeeccccCccceeeeeccCCC-eeeecCc-ceEEEEecCh-hhhcccccCcccccCcCCC
Confidence 999999999974222 222333333 2478888888875 5999998 9999999974 44443322 2356
Q ss_pred EEEEeecCCC-EEEEccCCceEEEeecc
Q 036314 318 VLCADWWRGD-SVISGGVDSKLCVSSGV 344 (347)
Q Consensus 318 v~~~~~~~~~-~l~s~s~D~~v~vw~~~ 344 (347)
+.|+.|+|-. .+|.|+.|.+|.||+-.
T Consensus 1354 ~scL~FHP~~~llAaG~~Ds~V~iYs~~ 1381 (1387)
T KOG1517|consen 1354 VSCLAFHPHRLLLAAGSADSTVSIYSCE 1381 (1387)
T ss_pred cceeeecchhHhhhhccCCceEEEeecC
Confidence 7999999876 58899999999999753
No 177
>KOG1587 consensus Cytoplasmic dynein intermediate chain [Cytoskeleton]
Probab=99.77 E-value=2.8e-16 Score=144.94 Aligned_cols=277 Identities=14% Similarity=0.133 Sum_probs=184.9
Q ss_pred CeEEEEcCCCe--EEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccce
Q 036314 45 NLGRVWKAGGV--CTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASV 122 (347)
Q Consensus 45 ~~i~iw~~~~~--~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V 122 (347)
+.+.+|+.... ....+. -...|.++.|+|... ..|+.|..+|+|-+||+..+.... ....-.....|..+|
T Consensus 222 ~~~~vW~~~~p~~Pe~~~~-~~s~v~~~~f~p~~p---~ll~gG~y~GqV~lWD~~~~~~~~---~s~ls~~~~sh~~~v 294 (555)
T KOG1587|consen 222 GVLLVWSLKNPNTPELVLE-SPSEVTCLKFCPFDP---NLLAGGCYNGQVVLWDLRKGSDTP---PSGLSALEVSHSEPV 294 (555)
T ss_pred ceEEEEecCCCCCceEEEe-cCCceeEEEeccCCc---ceEEeeccCceEEEEEccCCCCCC---CcccccccccCCcCe
Confidence 47899987532 223333 346699999998654 479999999999999998664311 011112334689999
Q ss_pred EEEEEeCCC--CEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeC--CCC
Q 036314 123 HSIAAETSG--NMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP--QQE 198 (347)
Q Consensus 123 ~~v~~s~~~--~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~ 198 (347)
..+.|-.+- .-++|+|.||.|..|+++.......... ..... ....... -.-.+.++.|+ +..
T Consensus 295 ~~vvW~~~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~----------~~~~~--~~~~~~~-~~~~~t~~~F~~~~p~ 361 (555)
T KOG1587|consen 295 TAVVWLQNEHNTEFFSLSSDGSICSWDTDMLSLPVEGLL----------LESKK--HKGQQSS-KAVGATSLKFEPTDPN 361 (555)
T ss_pred EEEEEeccCCCCceEEEecCCcEeeeeccccccchhhcc----------ccccc--ccccccc-cccceeeEeeccCCCc
Confidence 999885543 5599999999999998764322110000 00000 0000000 11245667774 345
Q ss_pred eEEEEecCCcEEEE---ECCCCc-e----e-eeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEec
Q 036314 199 TIYSASWDHSVRTW---DVEMGK-D----L-SDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFS 269 (347)
Q Consensus 199 ~l~s~s~dg~v~vw---d~~~~~-~----~-~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~ 269 (347)
.++.|+.+|.|.-- +.+... . . ....+..++.++.+.|-...+|++++ |.+++||..... ..|+..+.
T Consensus 362 ~FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~g-DW~vriWs~~~~--~~Pl~~~~ 438 (555)
T KOG1587|consen 362 HFIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVG-DWTVRIWSEDVI--ASPLLSLD 438 (555)
T ss_pred eEEEEcCCcEEEEEeccCCcccccccccccccccccCcceEeeecCCCccceeeeec-cceeEeccccCC--CCcchhhh
Confidence 68889999988762 332222 0 1 11112356788888777777777777 999999986532 34577888
Q ss_pred CCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCC--ccceeecCCCCeEEEEeecC-CCEEEEccCCceEEEeecc
Q 036314 270 SHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTA--WPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 270 ~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~--~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~D~~v~vw~~~ 344 (347)
.+.++|.+++|||-.+..++++..||.+.+||+... .++.+...+......+.|++ |+.|+.|+..|++.++...
T Consensus 439 ~~~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~~~~Pv~s~~~~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~ 516 (555)
T KOG1587|consen 439 SSPDYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQDDEEPVLSQKVCSPALTRVRWSPNGKLLAVGDANGTTHILKLS 516 (555)
T ss_pred hccceeeeeEEcCcCceEEEEEcCCCceehhhhhccccCCcccccccccccceeecCCCCcEEEEecCCCcEEEEEcC
Confidence 899999999999999999999999999999999753 45555555544445666776 8889999999999999864
No 178
>KOG1188 consensus WD40 repeat protein [General function prediction only]
Probab=99.76 E-value=4.3e-17 Score=136.09 Aligned_cols=243 Identities=16% Similarity=0.240 Sum_probs=165.4
Q ss_pred CEEEEEecCCeEEEEcC-CCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEecccccccc------Cc-c
Q 036314 36 GFILTGCYDNLGRVWKA-GGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVN------HP-K 107 (347)
Q Consensus 36 ~~l~sg~~d~~i~iw~~-~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~------~~-~ 107 (347)
..+|++...|.||+||. ++..+..+.+|.+.++.++|+..+ ..+.+.+|+.||+||+||+......+ .+ .
T Consensus 41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~d--s~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~ 118 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCD--SPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGT 118 (376)
T ss_pred eeEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCC--CCCeeEEeccCCeEEEEEeecchhhhheeccCCCCC
Confidence 56899999999999996 477888999999999999998754 23568999999999999986432111 00 0
Q ss_pred ----------------------------------cccee-eeeeccccceEEEEEeCCC-CEEEEeeCCCcEEEEecCCC
Q 036314 108 ----------------------------------KIRSF-KILRGHKASVHSIAAETSG-NMVCSGSWDCTISLWRTNDS 151 (347)
Q Consensus 108 ----------------------------------~~~~~-~~~~~h~~~V~~v~~s~~~-~~l~sgs~Dg~I~iwd~~~~ 151 (347)
..+++ .-...|.+-|+++.|+|.. ++|+|||.||-|.|||+...
T Consensus 119 ~f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d 198 (376)
T KOG1188|consen 119 PFICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKD 198 (376)
T ss_pred cceEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecCCC
Confidence 00101 1245799999999999976 79999999999999998754
Q ss_pred CCCCccceeeeccCCCccccccccccccccccCCccceEEEEeCCCC--eEEEEecCCcEEEEECCCCceeeeeeeC---
Q 036314 152 DAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQE--TIYSASWDHSVRTWDVEMGKDLSDIFCG--- 226 (347)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~l~s~s~dg~v~vwd~~~~~~~~~~~~~--- 226 (347)
... ..+-....|...|..+.|.... +|.+.+...++.+|+++.+.+...+.-.
T Consensus 199 ~Ee----------------------DaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~~~~~~~~~~~~~ 256 (376)
T KOG1188|consen 199 NEE----------------------DALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDGSEETWLENPDVS 256 (376)
T ss_pred cch----------------------hhHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEccCCChhhcccCccch
Confidence 221 1122233456668888885444 7999999999999999988754332211
Q ss_pred -----e---eeEEEEee-CCCCcEEEEecC-CCcEEEEeCCC---CCCCCCeEEecC-CCCCeeEEEeCCCCCeEEEEEe
Q 036314 227 -----K---ALNCIDIG-GEGSALIAAGGS-DPILRIWDPRK---PGTSAPVFQFSS-HNSWISACKWHNKSWFHLISAS 292 (347)
Q Consensus 227 -----~---~~~~~~~~-~~~~~~la~~~~-d~~i~iwd~~~---~~~~~~~~~~~~-h~~~v~~v~~s~~~~~~l~s~s 292 (347)
+ .-+-+... +.+..+.+.++. -++..++-+.. .....+...+.+ |..-|+++.|.-.+ .+|.||+
T Consensus 257 ~~d~r~~~~~dY~I~~~~~~~~~~~~l~g~~~n~~~~~~~~~~~s~~~~~~~a~l~g~~~eiVR~i~~~~~~-~~l~TGG 335 (376)
T KOG1188|consen 257 ADDLRKEDNCDYVINEHSPGDKDTCALAGTDSNKGTIFPLVDTSSGSLLTEPAILQGGHEEIVRDILFDVKN-DVLYTGG 335 (376)
T ss_pred hhhHHhhhhhhheeecccCCCcceEEEeccccCceeEEEeeecccccccCccccccCCcHHHHHHHhhhccc-ceeeccC
Confidence 0 00112222 334444444443 67777775542 112223455556 66667888887555 4799999
Q ss_pred CCCcEEEEEcC
Q 036314 293 YDGKVMLWDLR 303 (347)
Q Consensus 293 ~D~~i~lwd~~ 303 (347)
+||.+.+|...
T Consensus 336 EDG~l~~Wk~~ 346 (376)
T KOG1188|consen 336 EDGLLQAWKVE 346 (376)
T ss_pred CCceEEEEecC
Confidence 99999999853
No 179
>KOG1517 consensus Guanine nucleotide binding protein MIP1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.75 E-value=3e-16 Score=147.94 Aligned_cols=253 Identities=21% Similarity=0.276 Sum_probs=167.9
Q ss_pred eEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEE--eCCCCEEEEeeCCCcEE
Q 036314 67 VSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAA--ETSGNMVCSGSWDCTIS 144 (347)
Q Consensus 67 V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~--s~~~~~l~sgs~Dg~I~ 144 (347)
-..+.|+|-.. .++++.+--.|++||.+.++++..+... ......|+.+.+ ..|..++++|+.||.||
T Consensus 1067 pk~~~~hpf~p----~i~~ad~r~~i~vwd~e~~~~l~~F~n~------~~~~t~Vs~l~liNe~D~aLlLtas~dGvIR 1136 (1387)
T KOG1517|consen 1067 PKTLKFHPFEP----QIAAADDRERIRVWDWEKGRLLNGFDNG------AFPDTRVSDLELINEQDDALLLTASSDGVIR 1136 (1387)
T ss_pred CceeeecCCCc----eeEEcCCcceEEEEecccCceeccccCC------CCCCCccceeeeecccchhheeeeccCceEE
Confidence 34566666332 5777777779999999877654322111 112455777765 34567899999999999
Q ss_pred EEecCCCC-CCCccceeeeccCCCccccccccccccccccCCccceEEEEeC-CCCeEEEEecCCcEEEEECCCCceeee
Q 036314 145 LWRTNDSD-AAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP-QQETIYSASWDHSVRTWDVEMGKDLSD 222 (347)
Q Consensus 145 iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~l~s~s~dg~v~vwd~~~~~~~~~ 222 (347)
||+--... ...+.+..... +. ..+.+..+.-.-+.|. ..+.|++++.-+.|+|||+........
T Consensus 1137 Iwk~y~~~~~~~eLVTaw~~----------Ls----~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~~~d 1202 (1387)
T KOG1517|consen 1137 IWKDYADKWKKPELVTAWSS----------LS----DQLPGARGTGLVVDWQQQSGHLLVTGDVRSIRIWDAHKEQVVAD 1202 (1387)
T ss_pred EecccccccCCceeEEeecc----------cc----ccCccCCCCCeeeehhhhCCeEEecCCeeEEEEEecccceeEee
Confidence 99633211 11111110000 00 0011111111223564 445677777788999999988777777
Q ss_pred eeeCe--eeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCC--eeEEEeCCCCCeEEEEEeCCCcEE
Q 036314 223 IFCGK--ALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSW--ISACKWHNKSWFHLISASYDGKVM 298 (347)
Q Consensus 223 ~~~~~--~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~--v~~v~~s~~~~~~l~s~s~D~~i~ 298 (347)
+..+. .++.+.-....++++++|..||.|++||.|.+.....+..+..|.++ |.-+.+.+.|-..|++||.||.|+
T Consensus 1203 iP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~ 1282 (1387)
T KOG1517|consen 1203 IPYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQ 1282 (1387)
T ss_pred cccCCCccceeecccccCCceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEE
Confidence 76443 35555555556789999999999999999976655567788899998 999999988766799999999999
Q ss_pred EEEcCCCccc--eeecCCC--C-eEEEEeecC-CCEEEEccCCceEEEeecc
Q 036314 299 LWDLRTAWPL--SVIDSHK--D-KVLCADWWR-GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 299 lwd~~~~~~~--~~~~~h~--~-~v~~~~~~~-~~~l~s~s~D~~v~vw~~~ 344 (347)
+||+|..... .++..|- + .++++.-+. -..+|+|+. +.|.||+.-
T Consensus 1283 ~~DlR~~~~e~~~~iv~~~~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~ 1333 (1387)
T KOG1517|consen 1283 LLDLRMSSKETFLTIVAHWEYGSALTALTVHEHAPIIASGSA-QLIKIYSLS 1333 (1387)
T ss_pred EEecccCcccccceeeeccccCccceeeeeccCCCeeeecCc-ceEEEEecC
Confidence 9999974222 2233343 3 478888775 457899888 999999864
No 180
>KOG4227 consensus WD40 repeat protein [General function prediction only]
Probab=99.75 E-value=7.7e-17 Score=136.90 Aligned_cols=254 Identities=15% Similarity=0.216 Sum_probs=177.6
Q ss_pred CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeee-eccccceEEEEEeCCCC
Q 036314 54 GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKIL-RGHKASVHSIAAETSGN 132 (347)
Q Consensus 54 ~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~-~~h~~~V~~v~~s~~~~ 132 (347)
..|.+-+.+|.+.|+++.|+.. +++|++|+.|-.+++|.++..-....+ +++... ..|...|.|++|...+.
T Consensus 46 ~~~qKD~~~H~GCiNAlqFS~N----~~~L~SGGDD~~~~~W~~de~~~~k~~---KPI~~~~~~H~SNIF~L~F~~~N~ 118 (609)
T KOG4227|consen 46 PFCQKDVREHTGCINALQFSHN----DRFLASGGDDMHGRVWNVDELMVRKTP---KPIGVMEHPHRSNIFSLEFDLENR 118 (609)
T ss_pred chhhhhhhhhccccceeeeccC----CeEEeecCCcceeeeechHHHHhhcCC---CCceeccCccccceEEEEEccCCe
Confidence 4466678899999999999874 358999999999999998643222222 333332 23668899999999999
Q ss_pred EEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccc--cCCccceEEEEe-CCCCeEEEEecCCcE
Q 036314 133 MVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTL--VGHTQCVSSVVW-PQQETIYSASWDHSV 209 (347)
Q Consensus 133 ~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~h~~~v~~~~~-~~~~~l~s~s~dg~v 209 (347)
.+++|..+++|.+-|+++.+. +..+ ....+.|+.+.. |.++.+++.+.++.|
T Consensus 119 ~~~SG~~~~~VI~HDiEt~qs-------------------------i~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V 173 (609)
T KOG4227|consen 119 FLYSGERWGTVIKHDIETKQS-------------------------IYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLV 173 (609)
T ss_pred eEecCCCcceeEeeeccccee-------------------------eeeecccCcccceeecccCCCCceEEEEecCceE
Confidence 999999999999999986432 1111 112236666653 567889999999999
Q ss_pred EEEECCCCceeeee----eeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCC-------CCCeeEE
Q 036314 210 RTWDVEMGKDLSDI----FCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSH-------NSWISAC 278 (347)
Q Consensus 210 ~vwd~~~~~~~~~~----~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h-------~~~v~~v 278 (347)
.+||.+.......+ ..++....+.|+|....+|++....+-+.+||++++..+ +.+..+. +.| ..+
T Consensus 174 ~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~P~~P~Li~~~~~~~G~~~~D~R~~~~~--~~~~~~~~~L~~~~~~~-M~~ 250 (609)
T KOG4227|consen 174 SFIDNRDRQNPISLVLPANSGKNFYTAEFHPETPALILVNSETGGPNVFDRRMQARP--VYQRSMFKGLPQENTEW-MGS 250 (609)
T ss_pred EEEeccCCCCCCceeeecCCCccceeeeecCCCceeEEeccccCCCCceeeccccch--HHhhhccccCcccchhh-hhe
Confidence 99999865422222 234456778888988899999999999999999875433 3332222 222 457
Q ss_pred EeCCCCCeEEEEEeCCCcEEEEEcCC-CccceeecCCC-------CeEEEEeecCCCEEEEccCCceEEEeecc
Q 036314 279 KWHNKSWFHLISASYDGKVMLWDLRT-AWPLSVIDSHK-------DKVLCADWWRGDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 279 ~~s~~~~~~l~s~s~D~~i~lwd~~~-~~~~~~~~~h~-------~~v~~~~~~~~~~l~s~s~D~~v~vw~~~ 344 (347)
.|+|.|.. |++--...-=.+||+-. ..++..+. |. ..+.++.|..+..++|||.|=.|.+|..|
T Consensus 251 ~~~~~G~Q-~msiRR~~~P~~~D~~S~R~~V~k~D-~N~~GY~N~~T~KS~~F~~D~~v~tGSD~~~i~~WklP 322 (609)
T KOG4227|consen 251 LWSPSGNQ-FMSIRRGKCPLYFDFISQRCFVLKSD-HNPNGYCNIKTIKSMTFIDDYTVATGSDHWGIHIWKLP 322 (609)
T ss_pred eeCCCCCe-ehhhhccCCCEEeeeecccceeEecc-CCCCcceeeeeeeeeeeecceeeeccCcccceEEEecC
Confidence 89999865 55544444445677754 22233322 21 23557778777779999999999999876
No 181
>KOG2055 consensus WD40 repeat protein [General function prediction only]
Probab=99.75 E-value=2.7e-16 Score=136.08 Aligned_cols=243 Identities=12% Similarity=0.158 Sum_probs=176.3
Q ss_pred CCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCC-EEEEeeCCCc
Q 036314 64 CGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGN-MVCSGSWDCT 142 (347)
Q Consensus 64 ~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~-~l~sgs~Dg~ 142 (347)
.+.|++|.|+|.. ..|++|+.|+++++|.++... ...++.+.--.-||.+..|.|+|. .+++++.-.-
T Consensus 213 ~~~I~sv~FHp~~----plllvaG~d~~lrifqvDGk~-------N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky 281 (514)
T KOG2055|consen 213 HGGITSVQFHPTA----PLLLVAGLDGTLRIFQVDGKV-------NPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKY 281 (514)
T ss_pred cCCceEEEecCCC----ceEEEecCCCcEEEEEecCcc-------ChhheeeeeccCccceeeecCCCceEEEecccceE
Confidence 3679999999944 478999999999999987542 112333334477899999999998 9999999999
Q ss_pred EEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCc-cceEEEEe-CCCCeEEEEecCCcEEEEECCCCcee
Q 036314 143 ISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHT-QCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDL 220 (347)
Q Consensus 143 I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~ 220 (347)
...||+.+.... .+..+.++. ..+..+.. +++++|+..+..|.|.|.-..+++.+
T Consensus 282 ~ysyDle~ak~~-----------------------k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli 338 (514)
T KOG2055|consen 282 LYSYDLETAKVT-----------------------KLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELI 338 (514)
T ss_pred EEEeeccccccc-----------------------cccCCCCcccchhheeEecCCCCeEEEcccCceEEeehhhhhhhh
Confidence 999999754221 111222222 12222322 67889999999999999999999888
Q ss_pred eeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCC-CeeEEEeCCCCCeEEEEEeCCCcEEE
Q 036314 221 SDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNS-WISACKWHNKSWFHLISASYDGKVML 299 (347)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~-~v~~v~~s~~~~~~l~s~s~D~~i~l 299 (347)
..+.-...+..+.|++++. .|.+.+.+|.|.+||++.. ..+..+....+ .-.+++.++++. +||+||..|.|.|
T Consensus 339 ~s~KieG~v~~~~fsSdsk-~l~~~~~~GeV~v~nl~~~---~~~~rf~D~G~v~gts~~~S~ng~-ylA~GS~~GiVNI 413 (514)
T KOG2055|consen 339 TSFKIEGVVSDFTFSSDSK-ELLASGGTGEVYVWNLRQN---SCLHRFVDDGSVHGTSLCISLNGS-YLATGSDSGIVNI 413 (514)
T ss_pred heeeeccEEeeEEEecCCc-EEEEEcCCceEEEEecCCc---ceEEEEeecCccceeeeeecCCCc-eEEeccCcceEEE
Confidence 8877777788899987765 4555566889999999864 33455543222 235677778876 5999999999999
Q ss_pred EEcCC------CccceeecCCCCeEEEEeecC-CCEEE--EccCCceEEEeeccc
Q 036314 300 WDLRT------AWPLSVIDSHKDKVLCADWWR-GDSVI--SGGVDSKLCVSSGVS 345 (347)
Q Consensus 300 wd~~~------~~~~~~~~~h~~~v~~~~~~~-~~~l~--s~s~D~~v~vw~~~~ 345 (347)
||.++ ++|++++..-.-.|.++.|++ .+.|| |...+..+++--.||
T Consensus 414 Yd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~qiLAiaS~~~knalrLVHvPS 468 (514)
T KOG2055|consen 414 YDGNSCFASTNPKPIKTVDNLTTAITSLQFNHDAQILAIASRVKKNALRLVHVPS 468 (514)
T ss_pred eccchhhccCCCCchhhhhhhheeeeeeeeCcchhhhhhhhhccccceEEEeccc
Confidence 99653 467777776677899999975 55555 444688888765554
No 182
>KOG4227 consensus WD40 repeat protein [General function prediction only]
Probab=99.75 E-value=3.5e-16 Score=132.97 Aligned_cols=283 Identities=15% Similarity=0.168 Sum_probs=189.7
Q ss_pred CCCCcCCceeeccCC-CCCEEEEEecCCeEEEEcCCC-------eEEEEee-ccCCceEEEEEeecCCCceEEEEEccCC
Q 036314 19 EPSLHDDWVSAVDGS-NPGFILTGCYDNLGRVWKAGG-------VCTHILE-GHCGAVSSVNIIKSDGLKYVTVATASKD 89 (347)
Q Consensus 19 ~~~~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~~-------~~~~~l~-~h~~~V~~v~~~~~~~~~~~~l~s~s~D 89 (347)
...+|.+.|.++.|+ ++++||+||.|..+++|+... +.+.... .|...|.+++|... ...|.+|..+
T Consensus 51 D~~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~----N~~~~SG~~~ 126 (609)
T KOG4227|consen 51 DVREHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLE----NRFLYSGERW 126 (609)
T ss_pred hhhhhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccC----CeeEecCCCc
Confidence 356899999999999 678999999999999998631 2222222 35578999999652 2579999999
Q ss_pred CcEEEEeccccccccCccccceeeeeecccc---ceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCC
Q 036314 90 QTLRLWKFDAEELVNHPKKIRSFKILRGHKA---SVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGN 166 (347)
Q Consensus 90 g~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~---~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~ 166 (347)
++|.+.|+++.+ .+..+ .|.. .|..+..+|..+.|++.+.|+.|.+||+.+....+..+.
T Consensus 127 ~~VI~HDiEt~q---------si~V~-~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~------- 189 (609)
T KOG4227|consen 127 GTVIKHDIETKQ---------SIYVA-NENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVL------- 189 (609)
T ss_pred ceeEeeecccce---------eeeee-cccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceee-------
Confidence 999999998754 22322 4544 899999999999999999999999999987543322211
Q ss_pred CccccccccccccccccCCccceEEEEe-CC-CCeEEEEecCCcEEEEECCCCceee-e------eee-CeeeEEEEeeC
Q 036314 167 NQVEEPQLEGEAISTLVGHTQCVSSVVW-PQ-QETIYSASWDHSVRTWDVEMGKDLS-D------IFC-GKALNCIDIGG 236 (347)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~-~~~l~s~s~dg~v~vwd~~~~~~~~-~------~~~-~~~~~~~~~~~ 236 (347)
+....+....+.| |. ...|++.+..+.+-+||.+...... . ++. ....+.+-|.+
T Consensus 190 ---------------~AN~~~~F~t~~F~P~~P~Li~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~ 254 (609)
T KOG4227|consen 190 ---------------PANSGKNFYTAEFHPETPALILVNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSP 254 (609)
T ss_pred ---------------ecCCCccceeeeecCCCceeEEeccccCCCCceeeccccchHHhhhccccCcccchhhhheeeCC
Confidence 1111222334444 32 3467888888999999998654211 1 111 11224556666
Q ss_pred CCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCC-------CCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCC-----
Q 036314 237 EGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHN-------SWISACKWHNKSWFHLISASYDGKVMLWDLRT----- 304 (347)
Q Consensus 237 ~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~-------~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~----- 304 (347)
.+.++++. -....=-+||+-... .+++.+. |. ..+.++.|..+ +.++|||.+=.|.+|.+-.
T Consensus 255 ~G~Q~msi-RR~~~P~~~D~~S~R--~~V~k~D-~N~~GY~N~~T~KS~~F~~D--~~v~tGSD~~~i~~WklP~~~ds~ 328 (609)
T KOG4227|consen 255 SGNQFMSI-RRGKCPLYFDFISQR--CFVLKSD-HNPNGYCNIKTIKSMTFIDD--YTVATGSDHWGIHIWKLPRANDSY 328 (609)
T ss_pred CCCeehhh-hccCCCEEeeeeccc--ceeEecc-CCCCcceeeeeeeeeeeecc--eeeeccCcccceEEEecCCCcccc
Confidence 65554432 222333456664321 2233332 22 23667778655 4599999999999997632
Q ss_pred C------------------ccceeecCCCCeEEEEeecCCC-EEEEccCCceEEEeec
Q 036314 305 A------------------WPLSVIDSHKDKVLCADWWRGD-SVISGGVDSKLCVSSG 343 (347)
Q Consensus 305 ~------------------~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~D~~v~vw~~ 343 (347)
| ..+.++.||..-+.-|.|++.+ .|++.+..+.++||+-
T Consensus 329 G~~~IG~~~~~~~~~~~i~~~~~VLrGHRSv~NQVRF~~H~~~l~SSGVE~~~KlWS~ 386 (609)
T KOG4227|consen 329 GFTQIGHDEEEMPSEIFIEKELTVLRGHRSVPNQVRFSQHNNLLVSSGVENSFKLWSD 386 (609)
T ss_pred CccccCcchhhCchhheecceeEEEecccccccceeecCCcceEeccchhhheecccc
Confidence 1 0133578999989999999755 5788889999999974
No 183
>KOG2919 consensus Guanine nucleotide-binding protein [General function prediction only]
Probab=99.74 E-value=4.4e-16 Score=129.27 Aligned_cols=243 Identities=18% Similarity=0.327 Sum_probs=168.6
Q ss_pred eEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCc------cccceeeeeeccccceEEEEE-------eCCCCE
Q 036314 67 VSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHP------KKIRSFKILRGHKASVHSIAA-------ETSGNM 133 (347)
Q Consensus 67 V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~------~~~~~~~~~~~h~~~V~~v~~-------s~~~~~ 133 (347)
.....|+|++ ..|++-++|..+++|++...-..... +....++.. ....|..-.| .|+-.+
T Consensus 52 ~kgckWSPDG----SciL~~sedn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~--eg~tvydy~wYs~M~s~qP~t~l 125 (406)
T KOG2919|consen 52 LKGCKWSPDG----SCILSLSEDNCLNCWNLPFDLYSKKADGPLNFSKHLSYRYQ--EGETVYDYCWYSRMKSDQPSTNL 125 (406)
T ss_pred hccceeCCCC----ceEEeecccCeeeEEecChhhcccCCCCccccccceeEEec--cCCEEEEEEeeeccccCCCccce
Confidence 3467899954 47899999999999998643221110 000111111 1233444433 467789
Q ss_pred EEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCcc---ceEEEEe-CCCCeEEEEecCCcE
Q 036314 134 VCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQ---CVSSVVW-PQQETIYSASWDHSV 209 (347)
Q Consensus 134 l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~---~v~~~~~-~~~~~l~s~s~dg~v 209 (347)
+++.++|.-|++||.-+++...+. ..-.|.+ +..++.| |+|.+|++ +..+.|
T Consensus 126 ~a~ssr~~PIh~wdaftG~lraSy-----------------------~~ydh~de~taAhsL~Fs~DGeqlfa-Gykrci 181 (406)
T KOG2919|consen 126 FAVSSRDQPIHLWDAFTGKLRASY-----------------------RAYDHQDEYTAAHSLQFSPDGEQLFA-GYKRCI 181 (406)
T ss_pred eeeccccCceeeeeccccccccch-----------------------hhhhhHHhhhhheeEEecCCCCeEee-cccceE
Confidence 999999999999998776432111 1111222 2356777 57777765 578899
Q ss_pred EEEEC-CCCceee---eeee-----CeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEe
Q 036314 210 RTWDV-EMGKDLS---DIFC-----GKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKW 280 (347)
Q Consensus 210 ~vwd~-~~~~~~~---~~~~-----~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~ 280 (347)
+++|+ +.|..-. ++.. ...+.|++++|.+...+|.|++...+-||.-.. ..+++.+.+|.+.|+-+.|
T Consensus 182 rvFdt~RpGr~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~---~~pl~llggh~gGvThL~~ 258 (406)
T KOG2919|consen 182 RVFDTSRPGRDCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDG---RRPLQLLGGHGGGVTHLQW 258 (406)
T ss_pred EEeeccCCCCCCcchhhhhcccccccceeeeeeccCCCCcceeeecccceeeeEecCC---CCceeeecccCCCeeeEEe
Confidence 99999 5554221 1222 235789999998888999999999998886443 3467888899999999999
Q ss_pred CCCCCeEEEEEe-CCCcEEEEEcCC-CccceeecCCCC-eEEEEee---cCCCEEEEccCCceEEEeec
Q 036314 281 HNKSWFHLISAS-YDGKVMLWDLRT-AWPLSVIDSHKD-KVLCADW---WRGDSVISGGVDSKLCVSSG 343 (347)
Q Consensus 281 s~~~~~~l~s~s-~D~~i~lwd~~~-~~~~~~~~~h~~-~v~~~~~---~~~~~l~s~s~D~~v~vw~~ 343 (347)
.++|.. |.+|+ .|..|..||+|. ..++..+..|.+ .=..+-| +.|+.||+|+.||.|++|+.
T Consensus 259 ~edGn~-lfsGaRk~dkIl~WDiR~~~~pv~~L~rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdl 326 (406)
T KOG2919|consen 259 CEDGNK-LFSGARKDDKILCWDIRYSRDPVYALERHVGDTNQRILFDLDPKGEILASGDTDGSVRVWDL 326 (406)
T ss_pred ccCcCe-ecccccCCCeEEEEeehhccchhhhhhhhccCccceEEEecCCCCceeeccCCCccEEEEec
Confidence 999975 66666 688999999997 466777888876 3335556 35889999999999999985
No 184
>KOG1273 consensus WD40 repeat protein [General function prediction only]
Probab=99.74 E-value=3.6e-16 Score=129.38 Aligned_cols=193 Identities=13% Similarity=0.149 Sum_probs=146.8
Q ss_pred eEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeC-CCCeE
Q 036314 122 VHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP-QQETI 200 (347)
Q Consensus 122 V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~l 200 (347)
..|+.|++.|.++|.|..||.|-|||+.+. ...+.+.+|..+|.+++|+ +|+.|
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~-------------------------~iar~lsaH~~pi~sl~WS~dgr~L 80 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANGRVVIYDFDTF-------------------------RIARMLSAHVRPITSLCWSRDGRKL 80 (405)
T ss_pred cceEEeccCcceeeeeccCCcEEEEEcccc-------------------------chhhhhhccccceeEEEecCCCCEe
Confidence 678999999999999999999999998753 2345778899999999995 78899
Q ss_pred EEEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEec----CCCCCe-
Q 036314 201 YSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFS----SHNSWI- 275 (347)
Q Consensus 201 ~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~----~h~~~v- 275 (347)
+++|.|..|++||+..|.+++.+....++....++|.+.+.+++.--+..-.+-+...+.. ..++ +..+.+
T Consensus 81 ltsS~D~si~lwDl~~gs~l~rirf~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h----~~Lp~d~d~dln~sa 156 (405)
T KOG1273|consen 81 LTSSRDWSIKLWDLLKGSPLKRIRFDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKH----SVLPKDDDGDLNSSA 156 (405)
T ss_pred eeecCCceeEEEeccCCCceeEEEccCccceeeeccccCCeEEEEEecCCcEEEEecCCce----eeccCCCcccccccc
Confidence 9999999999999999999999988889888888887666555443333333333322110 1111 111111
Q ss_pred eEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCC-CeEEEEeec-CCCEEEEccCCceEEEeecc
Q 036314 276 SACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHK-DKVLCADWW-RGDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 276 ~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~-~~v~~~~~~-~~~~l~s~s~D~~v~vw~~~ 344 (347)
.+..|.+.|. ++.+|..-|.+.++|..+-+.+..+.-.. -.|..+.++ .|..|+.-+.|+.||.+++-
T Consensus 157 s~~~fdr~g~-yIitGtsKGkllv~~a~t~e~vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~ 226 (405)
T KOG1273|consen 157 SHGVFDRRGK-YIITGTSKGKLLVYDAETLECVASFRITSVQAIKQIIVSRKGRFLIINTSDRVIRTYEIS 226 (405)
T ss_pred ccccccCCCC-EEEEecCcceEEEEecchheeeeeeeechheeeeEEEEeccCcEEEEecCCceEEEEehh
Confidence 2234777775 59999999999999999988888775444 577888887 68889999999999999864
No 185
>KOG1587 consensus Cytoplasmic dynein intermediate chain [Cytoskeleton]
Probab=99.73 E-value=1.2e-15 Score=140.75 Aligned_cols=274 Identities=16% Similarity=0.229 Sum_probs=182.1
Q ss_pred EEEEeccCCCCcCC-CCCcCCceeeccCC--CCCEEEEEecCCeEEEEcCCCeE-------EEEeeccCCceEEEEEeec
Q 036314 6 IEYIKAVAPQKEEE-PSLHDDWVSAVDGS--NPGFILTGCYDNLGRVWKAGGVC-------THILEGHCGAVSSVNIIKS 75 (347)
Q Consensus 6 ~~~~~~~~~~~~~~-~~~h~~~v~~~~~~--~~~~l~sg~~d~~i~iw~~~~~~-------~~~l~~h~~~V~~v~~~~~ 75 (347)
+.|+-.+..+..-. .-.-...|++++|. ++.+||.|+++|+|-+||..+.. ......|..++..+.|...
T Consensus 223 ~~~vW~~~~p~~Pe~~~~~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~~ 302 (555)
T KOG1587|consen 223 VLLVWSLKNPNTPELVLESPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQN 302 (555)
T ss_pred eEEEEecCCCCCceEEEecCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEecc
Confidence 45565555441111 22345778899987 56799999999999999975321 1234578899999999764
Q ss_pred CCCceEEEEEccCCCcEEEEeccccccccCccccceeeeee------ccccceEEEEEeCCC-CEEEEeeCCCcEEEEec
Q 036314 76 DGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILR------GHKASVHSIAAETSG-NMVCSGSWDCTISLWRT 148 (347)
Q Consensus 76 ~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~------~h~~~V~~v~~s~~~-~~l~sgs~Dg~I~iwd~ 148 (347)
... .-++++|.||.|..|+++.-.. +....+..... .-...+++++|.+.. ..++.|+.+|.|..=+-
T Consensus 303 ~~~--~~f~s~ssDG~i~~W~~~~l~~---P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r 377 (555)
T KOG1587|consen 303 EHN--TEFFSLSSDGSICSWDTDMLSL---PVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCR 377 (555)
T ss_pred CCC--CceEEEecCCcEeeeecccccc---chhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEec
Confidence 432 4588999999999998753211 11011111000 113457888997755 57888999999876322
Q ss_pred CCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeC-CCCe-EEEEecCCcEEEEECC-CCceeeeeee
Q 036314 149 NDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP-QQET-IYSASWDHSVRTWDVE-MGKDLSDIFC 225 (347)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~-l~s~s~dg~v~vwd~~-~~~~~~~~~~ 225 (347)
........ ...+....+..|.++|..+.++ -... +++++ |-+++||... ...++..+..
T Consensus 378 ~g~~~~~~-----------------~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~g-DW~vriWs~~~~~~Pl~~~~~ 439 (555)
T KOG1587|consen 378 KGYTPAPE-----------------VSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVG-DWTVRIWSEDVIASPLLSLDS 439 (555)
T ss_pred cCCccccc-----------------ccccccccccccCcceEeeecCCCccceeeeec-cceeEeccccCCCCcchhhhh
Confidence 21111000 0012233556788999999874 3444 44544 9999999876 3444433332
Q ss_pred C-eeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCC
Q 036314 226 G-KALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRT 304 (347)
Q Consensus 226 ~-~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~ 304 (347)
. ..+.+++|+|....+|+++..||++.+||+... ...|.....-+......+.|++.+. +|+.|...|++.+|++..
T Consensus 440 ~~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~-~~~Pv~s~~~~~~~l~~~~~s~~g~-~lavGd~~G~~~~~~l~~ 517 (555)
T KOG1587|consen 440 SPDYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQD-DEEPVLSQKVCSPALTRVRWSPNGK-LLAVGDANGTTHILKLSE 517 (555)
T ss_pred ccceeeeeEEcCcCceEEEEEcCCCceehhhhhcc-ccCCcccccccccccceeecCCCCc-EEEEecCCCcEEEEEcCc
Confidence 2 348899999988889999999999999999753 3455666555666677788888774 699999999999999964
No 186
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.73 E-value=1.8e-14 Score=128.77 Aligned_cols=271 Identities=11% Similarity=0.153 Sum_probs=161.0
Q ss_pred EEEEecCCeEEEEcCC--Ce--EEEEeeccCCceEEEEEeecCCCceEEEE-EccCCCcEEEEeccc-cccccCccccce
Q 036314 38 ILTGCYDNLGRVWKAG--GV--CTHILEGHCGAVSSVNIIKSDGLKYVTVA-TASKDQTLRLWKFDA-EELVNHPKKIRS 111 (347)
Q Consensus 38 l~sg~~d~~i~iw~~~--~~--~~~~l~~h~~~V~~v~~~~~~~~~~~~l~-s~s~Dg~v~~wd~~~-~~~~~~~~~~~~ 111 (347)
.++.+.|+.|++|+.. +. .+..+. +.+....+.++|++. +|+ ++..++.|.+|+++. +++ ..
T Consensus 5 y~~~~~~~~I~~~~~~~~g~l~~~~~~~-~~~~~~~l~~spd~~----~lyv~~~~~~~i~~~~~~~~g~l-------~~ 72 (330)
T PRK11028 5 YIASPESQQIHVWNLNHEGALTLLQVVD-VPGQVQPMVISPDKR----HLYVGVRPEFRVLSYRIADDGAL-------TF 72 (330)
T ss_pred EEEcCCCCCEEEEEECCCCceeeeeEEe-cCCCCccEEECCCCC----EEEEEECCCCcEEEEEECCCCce-------EE
Confidence 4555778999999974 33 334444 335567788888543 444 445688999999863 221 11
Q ss_pred eeeeeccccceEEEEEeCCCCEEEEeeC-CCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceE
Q 036314 112 FKILRGHKASVHSIAAETSGNMVCSGSW-DCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVS 190 (347)
Q Consensus 112 ~~~~~~h~~~V~~v~~s~~~~~l~sgs~-Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 190 (347)
..... .......++|+|+++++++++. ++.|.+|++........ .+..+.+.. ...
T Consensus 73 ~~~~~-~~~~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~---------------------~~~~~~~~~-~~~ 129 (330)
T PRK11028 73 AAESP-LPGSPTHISTDHQGRFLFSASYNANCVSVSPLDKDGIPVA---------------------PIQIIEGLE-GCH 129 (330)
T ss_pred eeeec-CCCCceEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCC---------------------ceeeccCCC-ccc
Confidence 11111 2234567999999998887765 88999999863211100 011111111 123
Q ss_pred EEEe-CCCCeEE-EEecCCcEEEEECCCCceee-------eeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCC-
Q 036314 191 SVVW-PQQETIY-SASWDHSVRTWDVEMGKDLS-------DIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPG- 260 (347)
Q Consensus 191 ~~~~-~~~~~l~-s~s~dg~v~vwd~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~- 260 (347)
.+++ |++++++ +...++.|.+||+.+...+. ....+.....+.+++++..++++...++.|.+||+....
T Consensus 130 ~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~ 209 (330)
T PRK11028 130 SANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTVEGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHG 209 (330)
T ss_pred EeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccccCCCceecCCCCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCC
Confidence 3444 6777775 44556999999997633221 112234456788877665555555558999999986421
Q ss_pred CCCCeEEecC------CCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCC---CeEEEEeec-CCCEEE
Q 036314 261 TSAPVFQFSS------HNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHK---DKVLCADWW-RGDSVI 330 (347)
Q Consensus 261 ~~~~~~~~~~------h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~---~~v~~~~~~-~~~~l~ 330 (347)
.......+.. +..+...+.++|++.+++++...++.|.+|+++.......+.+|. ...+.+.++ +|++|+
T Consensus 210 ~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~~~~p~~~~~~~dg~~l~ 289 (330)
T PRK11028 210 EIECVQTLDMMPADFSDTRWAADIHITPDGRHLYACDRTASLISVFSVSEDGSVLSFEGHQPTETQPRGFNIDHSGKYLI 289 (330)
T ss_pred CEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEecCCCCeEEEEEEeCCCCeEEEeEEEeccccCCceEECCCCCEEE
Confidence 1112222221 122445688999997644444568899999996543222222221 134567886 477766
Q ss_pred Ecc-CCceEEEeec
Q 036314 331 SGG-VDSKLCVSSG 343 (347)
Q Consensus 331 s~s-~D~~v~vw~~ 343 (347)
+++ .+++|.||+-
T Consensus 290 va~~~~~~v~v~~~ 303 (330)
T PRK11028 290 AAGQKSHHISVYEI 303 (330)
T ss_pred EEEccCCcEEEEEE
Confidence 555 5999999964
No 187
>KOG1310 consensus WD40 repeat protein [General function prediction only]
Probab=99.72 E-value=2.1e-16 Score=139.48 Aligned_cols=261 Identities=16% Similarity=0.147 Sum_probs=156.3
Q ss_pred cCCCCCcCCceeeccCC-CCCEEEEEecCCeEEEEcCC-CeEEEE-eeccCCceEEEEEeecCCCceEEEEEccCCCcEE
Q 036314 17 EEEPSLHDDWVSAVDGS-NPGFILTGCYDNLGRVWKAG-GVCTHI-LEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLR 93 (347)
Q Consensus 17 ~~~~~~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~-~~~~~~-l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~ 93 (347)
+.++.||++.|.+++.+ +|.+|+|||.|-.+.|||.- -+.++. -.||.+.|.++.|.|..+. ..++||+.|..|+
T Consensus 43 E~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnn--riv~sgAgDk~i~ 120 (758)
T KOG1310|consen 43 EAELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNN--RIVLSGAGDKLIK 120 (758)
T ss_pred hhhhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCC--eEEEeccCcceEE
Confidence 34578999999999987 77899999999999999963 344444 4599999999999997653 5799999999999
Q ss_pred EEeccccccccC-ccccceeeeeeccccceEEEEEeCCC-CEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccc
Q 036314 94 LWKFDAEELVNH-PKKIRSFKILRGHKASVHSIAAETSG-NMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEE 171 (347)
Q Consensus 94 ~wd~~~~~~~~~-~~~~~~~~~~~~h~~~V~~v~~s~~~-~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 171 (347)
++|++..+.-.. -....+...+..|...|..++-.|++ ..+.+++.||+|+-+|++.+..-... ..
T Consensus 121 lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~------------~~ 188 (758)
T KOG1310|consen 121 LFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPD------------ED 188 (758)
T ss_pred EEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCcc------------cc
Confidence 999974321100 01112333456799999999999998 78999999999999999764210000 00
Q ss_pred ccccccccccccCCccceEEEEe-C-CCCeEEEEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCC
Q 036314 172 PQLEGEAISTLVGHTQCVSSVVW-P-QQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDP 249 (347)
Q Consensus 172 ~~~~~~~~~~~~~h~~~v~~~~~-~-~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~ 249 (347)
. ...+..+...--...++.. | +..+|+.|+.|-..++||.+.- +..+..... ....|+. .++
T Consensus 189 ~---~~~l~ny~~~lielk~ltisp~rp~~laVGgsdpfarLYD~Rr~--lks~~s~~~---~~~~pp~--------~~~ 252 (758)
T KOG1310|consen 189 C---PSILVNYNPQLIELKCLTISPSRPYYLAVGGSDPFARLYDRRRV--LKSFRSDGT---MNTCPPK--------DCR 252 (758)
T ss_pred c---cHHHHHhchhhheeeeeeecCCCCceEEecCCCchhhhhhhhhh--ccCCCCCcc---ccCCCCc--------ccc
Confidence 0 0000011111112234443 2 3456788888888888886432 111111000 0011110 122
Q ss_pred cEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCcccee
Q 036314 250 ILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSV 310 (347)
Q Consensus 250 ~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~ 310 (347)
.++.|-+.....+ ...+..-.-.++-+.|+|+|..+|++-+. ..|.++|+..++....
T Consensus 253 cv~yf~p~hlkn~--~gn~~~~~~~~t~vtfnpNGtElLvs~~g-EhVYlfdvn~~~~~~~ 310 (758)
T KOG1310|consen 253 CVRYFSPGHLKNS--QGNLDRYITCCTYVTFNPNGTELLVSWGG-EHVYLFDVNEDKSPTP 310 (758)
T ss_pred hhheecCccccCc--ccccccceeeeEEEEECCCCcEEEEeeCC-eEEEEEeecCCCCcee
Confidence 3333322110000 00000000013457899999887776554 3699999987765443
No 188
>KOG1524 consensus WD40 repeat-containing protein CHE-2 [General function prediction only]
Probab=99.70 E-value=3e-15 Score=131.97 Aligned_cols=263 Identities=17% Similarity=0.227 Sum_probs=173.7
Q ss_pred CcCCceeeccCCCCCEEEEEecCCeEEEEc-CCCeEEEEeeccCCceEEEEE----eecCCCceEEEEEccCCCcEEEEe
Q 036314 22 LHDDWVSAVDGSNPGFILTGCYDNLGRVWK-AGGVCTHILEGHCGAVSSVNI----IKSDGLKYVTVATASKDQTLRLWK 96 (347)
Q Consensus 22 ~h~~~v~~~~~~~~~~l~sg~~d~~i~iw~-~~~~~~~~l~~h~~~V~~v~~----~~~~~~~~~~l~s~s~Dg~v~~wd 96 (347)
-|..-|.++..+...-+...+.|..+-+|. .....+..+.-..+.|....+ +..++.....++.++.||.+.+-+
T Consensus 12 r~~e~vc~v~w~~~eei~~~~dDh~~~~~~~~~~~s~~~~~~p~df~pt~~h~~~rs~~~g~~~d~~~i~s~DGkf~il~ 91 (737)
T KOG1524|consen 12 RNSEKVCCVDWSSNEEIYFVSDDHQIFKWSDVSRDSVEVAKLPDDFVPTDMHLGGRSSGGGKGSDTLLICSNDGRFVILN 91 (737)
T ss_pred ccceeEEeecccccceEEEeccCceEEEeecccchhhhhhhCCcccCCccccccccccCCCCCcceEEEEcCCceEEEec
Confidence 455667788876555666777777777764 432222222222222222111 111222345678889999988876
Q ss_pred ccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccc
Q 036314 97 FDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEG 176 (347)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (347)
... +.-....+|.+++.+-.|+|||.-|++++.||.|++|.-..
T Consensus 92 k~~----------rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSrsG-------------------------- 135 (737)
T KOG1524|consen 92 KSA----------RVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSRSG-------------------------- 135 (737)
T ss_pred ccc----------hhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEeccc--------------------------
Confidence 432 22335678999999999999999999999999999996432
Q ss_pred cccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeeeeC-eeeEEEEeeCCCCcEEEEecCCCcEEEE
Q 036314 177 EAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCG-KALNCIDIGGEGSALIAAGGSDPILRIW 254 (347)
Q Consensus 177 ~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~la~~~~d~~i~iw 254 (347)
....++.....+|+|++| |+...++.+ ..+.+.|=-+.....+..+..+ ..+-++++++. ..++++|++|-+.++|
T Consensus 136 MLRStl~Q~~~~v~c~~W~p~S~~vl~c-~g~h~~IKpL~~n~k~i~WkAHDGiiL~~~W~~~-s~lI~sgGED~kfKvW 213 (737)
T KOG1524|consen 136 MLRSTVVQNEESIRCARWAPNSNSIVFC-QGGHISIKPLAANSKIIRWRAHDGLVLSLSWSTQ-SNIIASGGEDFRFKIW 213 (737)
T ss_pred hHHHHHhhcCceeEEEEECCCCCceEEe-cCCeEEEeecccccceeEEeccCcEEEEeecCcc-ccceeecCCceeEEee
Confidence 122234445668999999 555544333 2345666666655555555544 45788899654 5689999999999999
Q ss_pred eCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeec-CCCEEEEcc
Q 036314 255 DPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWW-RGDSVISGG 333 (347)
Q Consensus 255 d~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~-~~~~l~s~s 333 (347)
|.. ..+++.-+.|.-.|++++|+|+. .++.+|.+ +.| ++ ....+.|..++|| +|.+++.|.
T Consensus 214 D~~----G~~Lf~S~~~ey~ITSva~npd~--~~~v~S~n-t~R---~~--------~p~~GSifnlsWS~DGTQ~a~gt 275 (737)
T KOG1524|consen 214 DAQ----GANLFTSAAEEYAITSVAFNPEK--DYLLWSYN-TAR---FS--------SPRVGSIFNLSWSADGTQATCGT 275 (737)
T ss_pred ccc----CcccccCChhccceeeeeecccc--ceeeeeee-eee---ec--------CCCccceEEEEEcCCCceeeccc
Confidence 965 23577778899999999999994 45555542 333 11 1235789999998 577888777
Q ss_pred CCceEEE
Q 036314 334 VDSKLCV 340 (347)
Q Consensus 334 ~D~~v~v 340 (347)
..|-|.+
T Consensus 276 ~~G~v~~ 282 (737)
T KOG1524|consen 276 STGQLIV 282 (737)
T ss_pred cCceEEE
Confidence 7777654
No 189
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.70 E-value=1.9e-15 Score=139.34 Aligned_cols=234 Identities=15% Similarity=0.140 Sum_probs=150.4
Q ss_pred CCeEEEEcCCCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCC---CcEEEEeccccccccCccccceeeeeecccc
Q 036314 44 DNLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKD---QTLRLWKFDAEELVNHPKKIRSFKILRGHKA 120 (347)
Q Consensus 44 d~~i~iw~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~D---g~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~ 120 (347)
+.+|++||..|...+.+..|...+.+..|+|++. .|+..+.+ .+|.+||+.+++. +.+..+.+|.
T Consensus 183 ~~~i~i~d~dg~~~~~lt~~~~~v~~p~wSPDG~----~la~~s~~~~~~~i~i~dl~tg~~-------~~l~~~~g~~- 250 (429)
T PRK01742 183 PYEVRVADYDGFNQFIVNRSSQPLMSPAWSPDGS----KLAYVSFENKKSQLVVHDLRSGAR-------KVVASFRGHN- 250 (429)
T ss_pred eEEEEEECCCCCCceEeccCCCccccceEcCCCC----EEEEEEecCCCcEEEEEeCCCCce-------EEEecCCCcc-
Confidence 4689999988776777888888899999999553 46665543 4799999876532 1223334443
Q ss_pred ceEEEEEeCCCCEEEEe-eCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CCCC
Q 036314 121 SVHSIAAETSGNMVCSG-SWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQE 198 (347)
Q Consensus 121 ~V~~v~~s~~~~~l~sg-s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~ 198 (347)
..++|+|||+.|+.+ +.||.+.||.++-.. .....+..+...+....| |+++
T Consensus 251 --~~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~------------------------~~~~~lt~~~~~~~~~~wSpDG~ 304 (429)
T PRK01742 251 --GAPAFSPDGSRLAFASSKDGVLNIYVMGANG------------------------GTPSQLTSGAGNNTEPSWSPDGQ 304 (429)
T ss_pred --CceeECCCCCEEEEEEecCCcEEEEEEECCC------------------------CCeEeeccCCCCcCCEEECCCCC
Confidence 357999999988765 578887777543110 011223334444566677 5777
Q ss_pred eEEEEe-cCCcEEEEECCCC-ceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCee
Q 036314 199 TIYSAS-WDHSVRTWDVEMG-KDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWIS 276 (347)
Q Consensus 199 ~l~s~s-~dg~v~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~ 276 (347)
.|+.++ .++..+||++... .....+ .... ....++|++. .++..+.++ +.+||+.... . ..+..+. ...
T Consensus 305 ~i~f~s~~~g~~~I~~~~~~~~~~~~l-~~~~-~~~~~SpDG~-~ia~~~~~~-i~~~Dl~~g~-~---~~lt~~~-~~~ 375 (429)
T PRK01742 305 SILFTSDRSGSPQVYRMSASGGGASLV-GGRG-YSAQISADGK-TLVMINGDN-VVKQDLTSGS-T---EVLSSTF-LDE 375 (429)
T ss_pred EEEEEECCCCCceEEEEECCCCCeEEe-cCCC-CCccCCCCCC-EEEEEcCCC-EEEEECCCCC-e---EEecCCC-CCC
Confidence 766554 5688899987432 222222 1112 3456766554 555555554 6669986432 1 1222121 235
Q ss_pred EEEeCCCCCeEEEEEeCCCcEEEEEcC--CCccceeecCCCCeEEEEeecC
Q 036314 277 ACKWHNKSWFHLISASYDGKVMLWDLR--TAWPLSVIDSHKDKVLCADWWR 325 (347)
Q Consensus 277 ~v~~s~~~~~~l~s~s~D~~i~lwd~~--~~~~~~~~~~h~~~v~~~~~~~ 325 (347)
++.|+|++. +|+.++.++.+.+|++. ++...+.+.+|.+.+...+|+|
T Consensus 376 ~~~~sPdG~-~i~~~s~~g~~~~l~~~~~~G~~~~~l~~~~g~~~~p~wsp 425 (429)
T PRK01742 376 SPSISPNGI-MIIYSSTQGLGKVLQLVSADGRFKARLPGSDGQVKFPAWSP 425 (429)
T ss_pred CceECCCCC-EEEEEEcCCCceEEEEEECCCCceEEccCCCCCCCCcccCC
Confidence 678999986 58888889988888763 5777888888888899999986
No 190
>KOG1538 consensus Uncharacterized conserved protein WDR10, contains WD40 repeats [General function prediction only]
Probab=99.69 E-value=3.2e-15 Score=134.95 Aligned_cols=268 Identities=12% Similarity=0.195 Sum_probs=184.7
Q ss_pred ceeeccCCC-CCEEEEEecCCeEEEEcC-CCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccc
Q 036314 26 WVSAVDGSN-PGFILTGCYDNLGRVWKA-GGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELV 103 (347)
Q Consensus 26 ~v~~~~~~~-~~~l~sg~~d~~i~iw~~-~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~ 103 (347)
.|..++|-+ |..|+-+ .+..+.+||. .|..+.+|++|.+.|.+++++.++ ..+|||+.|..|.+|.-.-...
T Consensus 14 ci~d~afkPDGsqL~lA-Ag~rlliyD~ndG~llqtLKgHKDtVycVAys~dG----krFASG~aDK~VI~W~~klEG~- 87 (1081)
T KOG1538|consen 14 CINDIAFKPDGTQLILA-AGSRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDG----KRFASGSADKSVIIWTSKLEGI- 87 (1081)
T ss_pred chheeEECCCCceEEEe-cCCEEEEEeCCCcccccccccccceEEEEEEccCC----ceeccCCCceeEEEecccccce-
Confidence 788888874 4433333 2458899997 488889999999999999999844 5799999999999998542211
Q ss_pred cCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccccccccccc
Q 036314 104 NHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLV 183 (347)
Q Consensus 104 ~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (347)
+ -..|.+.|.|+.|+|-...++|++-. ...+|..+... +...+
T Consensus 88 --------L--kYSH~D~IQCMsFNP~~h~LasCsLs-dFglWS~~qK~--------------------------V~K~k 130 (1081)
T KOG1538|consen 88 --------L--KYSHNDAIQCMSFNPITHQLASCSLS-DFGLWSPEQKS--------------------------VSKHK 130 (1081)
T ss_pred --------e--eeccCCeeeEeecCchHHHhhhcchh-hccccChhhhh--------------------------HHhhh
Confidence 1 13699999999999999999988754 45678654321 00000
Q ss_pred CCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeee----eCeeeEEEEeeCCCC----cEEEEecCCCcEEEE
Q 036314 184 GHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIF----CGKALNCIDIGGEGS----ALIAAGGSDPILRIW 254 (347)
Q Consensus 184 ~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~----~~~~~~~~~~~~~~~----~~la~~~~d~~i~iw 254 (347)
-...+.+.+| .+|++++-|-.||+|.+-+-. +++-..+. ...++..++++|..+ ..++......++.+|
T Consensus 131 -ss~R~~~CsWtnDGqylalG~~nGTIsiRNk~-gEek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy 208 (1081)
T KOG1538|consen 131 -SSSRIICCSWTNDGQYLALGMFNGTISIRNKN-GEEKVKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFY 208 (1081)
T ss_pred -hheeEEEeeecCCCcEEEEeccCceEEeecCC-CCcceEEeCCCCCCCCceEEEecCCCCCCccceEEEEeccceeEEE
Confidence 1124566778 478899999999999998743 33322332 234678888876532 256777777888888
Q ss_pred eCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeecC-CCEEEEcc
Q 036314 255 DPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGG 333 (347)
Q Consensus 255 d~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~s 333 (347)
.+... .......+. -+ -.|+.+.|+|.+ ++.|+.|+.+++|- |.|..+.++-....-||+|.-.| +++++.|.
T Consensus 209 ~LsG~-~Igk~r~L~--Fd-P~CisYf~NGEy-~LiGGsdk~L~~fT-R~GvrLGTvg~~D~WIWtV~~~PNsQ~v~~GC 282 (1081)
T KOG1538|consen 209 QLSGK-QIGKDRALN--FD-PCCISYFTNGEY-ILLGGSDKQLSLFT-RDGVRLGTVGEQDSWIWTVQAKPNSQYVVVGC 282 (1081)
T ss_pred Eecce-eecccccCC--CC-chhheeccCCcE-EEEccCCCceEEEe-ecCeEEeeccccceeEEEEEEccCCceEEEEE
Confidence 76531 111111111 11 246778889875 77788899999994 45666666655556789999865 77899999
Q ss_pred CCceEEEeecc
Q 036314 334 VDSKLCVSSGV 344 (347)
Q Consensus 334 ~D~~v~vw~~~ 344 (347)
.||||-.+..+
T Consensus 283 qDGTiACyNl~ 293 (1081)
T KOG1538|consen 283 QDGTIACYNLI 293 (1081)
T ss_pred ccCeeehhhhH
Confidence 99999766543
No 191
>KOG1963 consensus WD40 repeat protein [General function prediction only]
Probab=99.68 E-value=3.7e-14 Score=131.89 Aligned_cols=296 Identities=15% Similarity=0.193 Sum_probs=193.7
Q ss_pred CCCcCCceeeccCC-CCCEEEEEecCCeEEEEcCCC-----eEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEE
Q 036314 20 PSLHDDWVSAVDGS-NPGFILTGCYDNLGRVWKAGG-----VCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLR 93 (347)
Q Consensus 20 ~~~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~~-----~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~ 93 (347)
...|.-.+++++++ ++.++|+|-.||+|.+|..-+ ...+.|+=|.++|.+++|++++ ..|+||+..|.+-
T Consensus 201 ~~~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G----~~LlSGG~E~VLv 276 (792)
T KOG1963|consen 201 TVHHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDG----AYLLSGGREGVLV 276 (792)
T ss_pred hhhhcccceeEEeccccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEecCC----ceEeecccceEEE
Confidence 33688889999998 577999999999999996322 2345688899999999999954 4799999999999
Q ss_pred EEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccc
Q 036314 94 LWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQ 173 (347)
Q Consensus 94 ~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (347)
+|.+.+++. +-|+.=.++|..+.++||+...+....|..|.+-...+........ ......+.
T Consensus 277 ~Wq~~T~~k----------qfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~~k~tIs-------gi~~~~~~ 339 (792)
T KOG1963|consen 277 LWQLETGKK----------QFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDLEIKSTIS-------GIKPPTPS 339 (792)
T ss_pred EEeecCCCc----------ccccccCCeeEEEEEcCCCCeEEEEecCceEEEEeccchhhhhhcc-------CccCCCcc
Confidence 999987641 1123346789999999999999999999999999876643221100 00000000
Q ss_pred ccccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeeee-------Ce-----eeEEEEeeCCCCc
Q 036314 174 LEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFC-------GK-----ALNCIDIGGEGSA 240 (347)
Q Consensus 174 ~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~-------~~-----~~~~~~~~~~~~~ 240 (347)
......+-...+.+ |.-+.++-.+..+.|++||+-+.+.+.++.. +. .+..++.+.. ++
T Consensus 340 -------~k~~~~~l~t~~~idpr~~~~vln~~~g~vQ~ydl~td~~i~~~~v~~~n~~~~~~n~~v~itav~~~~~-gs 411 (792)
T KOG1963|consen 340 -------TKTRPQSLTTGVSIDPRTNSLVLNGHPGHVQFYDLYTDSTIYKLQVCDENYSDGDVNIQVGITAVARSRF-GS 411 (792)
T ss_pred -------ccccccccceeEEEcCCCCceeecCCCceEEEEeccccceeeeEEEEeecccCCcceeEEeeeeehhhcc-ce
Confidence 00111222333444 3244566677889999999987776655531 11 2233333333 44
Q ss_pred EEEEe--------cC--CCcEEEEeCCCCCCC--CCeEEecCCCCCeeEEEeCCC-CCeEEEEEeCCCcEEEEEcCC---
Q 036314 241 LIAAG--------GS--DPILRIWDPRKPGTS--APVFQFSSHNSWISACKWHNK-SWFHLISASYDGKVMLWDLRT--- 304 (347)
Q Consensus 241 ~la~~--------~~--d~~i~iwd~~~~~~~--~~~~~~~~h~~~v~~v~~s~~-~~~~l~s~s~D~~i~lwd~~~--- 304 (347)
.+++. .. ...+++|--....+. .......+|...+....+.+. ...+.++++.||.+|||-+..
T Consensus 412 ~maT~E~~~d~~~~~~~e~~LKFW~~n~~~kt~~L~T~I~~PH~~~~vat~~~~~~rs~~~vta~~dg~~KiW~~~~~~n 491 (792)
T KOG1963|consen 412 WMATLEARIDKFNFFDGEVSLKFWQYNPNSKTFILNTKINNPHGNAFVATIFLNPTRSVRCVTASVDGDFKIWVFTDDSN 491 (792)
T ss_pred EEEEeeeeehhhhccCceEEEEEEEEcCCcceeEEEEEEecCCCceeEEEEEecCcccceeEEeccCCeEEEEEEecccc
Confidence 55442 22 245778864322111 112234578887666555444 333799999999999998832
Q ss_pred ---C----ccceeecCCCCeEEEEeecCCCEEEEccCCceEEEeecc
Q 036314 305 ---A----WPLSVIDSHKDKVLCADWWRGDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 305 ---~----~~~~~~~~h~~~v~~~~~~~~~~l~s~s~D~~v~vw~~~ 344 (347)
. .+...-..|.-++..++|+.+..++++|.|++|.+|+-.
T Consensus 492 ~~k~~s~W~c~~i~sy~k~~i~a~~fs~dGslla~s~~~~Itiwd~~ 538 (792)
T KOG1963|consen 492 IYKKSSNWTCKAIGSYHKTPITALCFSQDGSLLAVSFDDTITIWDYD 538 (792)
T ss_pred cCcCccceEEeeeeccccCcccchhhcCCCcEEEEecCCEEEEecCC
Confidence 1 112223358889999999865577888999999999854
No 192
>KOG1445 consensus Tumor-specific antigen (contains WD repeats) [Cytoskeleton]
Probab=99.68 E-value=2e-15 Score=135.59 Aligned_cols=236 Identities=18% Similarity=0.272 Sum_probs=157.4
Q ss_pred EecCCeEEEEcCC--CeEE-EEee--ccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeee
Q 036314 41 GCYDNLGRVWKAG--GVCT-HILE--GHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKIL 115 (347)
Q Consensus 41 g~~d~~i~iw~~~--~~~~-~~l~--~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~ 115 (347)
.|..|.|-|+++. |..- ..+. -....|..+.|.|-+. ..||.+++||.|++|.+..+.+.. ....+...+
T Consensus 599 ~g~gG~iai~el~~PGrLPDgv~p~l~Ngt~vtDl~WdPFD~---~rLAVa~ddg~i~lWr~~a~gl~e--~~~tPe~~l 673 (1012)
T KOG1445|consen 599 AGSGGVIAIYELNEPGRLPDGVMPGLFNGTLVTDLHWDPFDD---ERLAVATDDGQINLWRLTANGLPE--NEMTPEKIL 673 (1012)
T ss_pred cCCCceEEEEEcCCCCCCCcccccccccCceeeecccCCCCh---HHeeecccCceEEEEEeccCCCCc--ccCCcceee
Confidence 4556899999863 3221 1111 1334688999987543 469999999999999998765432 223445678
Q ss_pred eccccceEEEEEeCC-CCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe
Q 036314 116 RGHKASVHSIAAETS-GNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW 194 (347)
Q Consensus 116 ~~h~~~V~~v~~s~~-~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 194 (347)
.+|...|.++.|+|= .+.|+++++|.+|++||+.+. +....+.+|++.|.+++|
T Consensus 674 t~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~-------------------------~~~~~l~gHtdqIf~~AW 728 (1012)
T KOG1445|consen 674 TIHGEKITSLRFHPLAADVLAVASYDSTIELWDLANA-------------------------KLYSRLVGHTDQIFGIAW 728 (1012)
T ss_pred ecccceEEEEEecchhhhHhhhhhccceeeeeehhhh-------------------------hhhheeccCcCceeEEEE
Confidence 899999999999995 478999999999999999764 234467899999999999
Q ss_pred -CCCCeEEEEecCCcEEEEECCCCceeeee-ee--CeeeEEEEeeCCCCcEEEEecC---CCcEEEEeCCCCCCCCCeEE
Q 036314 195 -PQQETIYSASWDHSVRTWDVEMGKDLSDI-FC--GKALNCIDIGGEGSALIAAGGS---DPILRIWDPRKPGTSAPVFQ 267 (347)
Q Consensus 195 -~~~~~l~s~s~dg~v~vwd~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~la~~~~---d~~i~iwd~~~~~~~~~~~~ 267 (347)
++|+.+++.+.||+|++|+.+.+...... .. +..-..+.|.-++..++++|.. ...|.+||...-. ..++.+
T Consensus 729 SpdGr~~AtVcKDg~~rVy~Prs~e~pv~Eg~gpvgtRgARi~wacdgr~viv~Gfdk~SeRQv~~Y~Aq~l~-~~pl~t 807 (1012)
T KOG1445|consen 729 SPDGRRIATVCKDGTLRVYEPRSREQPVYEGKGPVGTRGARILWACDGRIVIVVGFDKSSERQVQMYDAQTLD-LRPLYT 807 (1012)
T ss_pred CCCCcceeeeecCceEEEeCCCCCCCccccCCCCccCcceeEEEEecCcEEEEecccccchhhhhhhhhhhcc-CCccee
Confidence 58889999999999999998876532211 11 1111223344455555555532 3567788765321 122222
Q ss_pred ecCCCCC-eeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCcc
Q 036314 268 FSSHNSW-ISACKWHNKSWFHLISASYDGKVMLWDLRTAWP 307 (347)
Q Consensus 268 ~~~h~~~-v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~ 307 (347)
..-.... +.--.+.+|...++++|-.|..|.+|++-...+
T Consensus 808 ~~lDvaps~LvP~YD~Ds~~lfltGKGD~~v~~yEv~~esP 848 (1012)
T KOG1445|consen 808 QVLDVAPSPLVPHYDYDSNVLFLTGKGDRFVNMYEVIYESP 848 (1012)
T ss_pred eeecccCccccccccCCCceEEEecCCCceEEEEEecCCCc
Confidence 2111110 000124456677899999999999999876543
No 193
>KOG0649 consensus WD40 repeat protein [General function prediction only]
Probab=99.65 E-value=1.5e-13 Score=110.25 Aligned_cols=201 Identities=14% Similarity=0.223 Sum_probs=138.4
Q ss_pred CCcCCceeeccCCCCCEEEEEecCCeEEEEcCCC-----eEE----EEeeccC-----CceEEEEEeecCCCceEEEEEc
Q 036314 21 SLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAGG-----VCT----HILEGHC-----GAVSSVNIIKSDGLKYVTVATA 86 (347)
Q Consensus 21 ~~h~~~v~~~~~~~~~~l~sg~~d~~i~iw~~~~-----~~~----~~l~~h~-----~~V~~v~~~~~~~~~~~~l~s~ 86 (347)
-+|+++|..++|. +.+|++|+ ||.|+=|.-.. .+. ....-|. ..|+++-..|+.+. ++.+
T Consensus 59 qahdgpiy~~~f~-d~~Lls~g-dG~V~gw~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enS----i~~A 132 (325)
T KOG0649|consen 59 QAHDGPIYYLAFH-DDFLLSGG-DGLVYGWEWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENS----ILFA 132 (325)
T ss_pred cccCCCeeeeeee-hhheeecc-CceEEEeeehhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCc----EEEe
Confidence 4799999999987 45677775 59999885321 111 1122233 35788888776553 6677
Q ss_pred cCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCC
Q 036314 87 SKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGN 166 (347)
Q Consensus 87 s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~ 166 (347)
+.|+.+.-||+++++. ..+++||++-|++++--.....++||+.||++|+||+.+..+.... .
T Consensus 133 gGD~~~y~~dlE~G~i---------~r~~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~i----e---- 195 (325)
T KOG0649|consen 133 GGDGVIYQVDLEDGRI---------QREYRGHTDYVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVSMI----E---- 195 (325)
T ss_pred cCCeEEEEEEecCCEE---------EEEEcCCcceeeeeeecccCcceeecCCCccEEEEeccccceeEEe----c----
Confidence 7999999999998863 4578999999999987555568999999999999999876432110 0
Q ss_pred CccccccccccccccccCC-ccceEEEEeCCCCeEEEEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEe
Q 036314 167 NQVEEPQLEGEAISTLVGH-TQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAG 245 (347)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~ 245 (347)
++-. ...++.| ..+|-+++- +...+++| ....+.+|.++..++...+....++..++|.. ..++++
T Consensus 196 -----~yk~---~~~lRp~~g~wigala~-~edWlvCG-gGp~lslwhLrsse~t~vfpipa~v~~v~F~~---d~vl~~ 262 (325)
T KOG0649|consen 196 -----PYKN---PNLLRPDWGKWIGALAV-NEDWLVCG-GGPKLSLWHLRSSESTCVFPIPARVHLVDFVD---DCVLIG 262 (325)
T ss_pred -----cccC---hhhcCcccCceeEEEec-cCceEEec-CCCceeEEeccCCCceEEEecccceeEeeeec---ceEEEe
Confidence 0000 0112223 245666653 34566655 45679999999988888777777777888843 256778
Q ss_pred cCCCcEEEEeCC
Q 036314 246 GSDPILRIWDPR 257 (347)
Q Consensus 246 ~~d~~i~iwd~~ 257 (347)
++.+.|.-|.+.
T Consensus 263 G~g~~v~~~~l~ 274 (325)
T KOG0649|consen 263 GEGNHVQSYTLN 274 (325)
T ss_pred ccccceeeeeec
Confidence 888889988765
No 194
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.65 E-value=7.2e-14 Score=134.00 Aligned_cols=292 Identities=16% Similarity=0.160 Sum_probs=176.2
Q ss_pred CCcCCceeeccCCC-C-CEEEEEecCCeEEEEcCC---Ce-----EEEEeeccCCceEEEEEeecCCCceEEEEEccCCC
Q 036314 21 SLHDDWVSAVDGSN-P-GFILTGCYDNLGRVWKAG---GV-----CTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQ 90 (347)
Q Consensus 21 ~~h~~~v~~~~~~~-~-~~l~sg~~d~~i~iw~~~---~~-----~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg 90 (347)
..|...|..++.++ . .+++|||.||+||+||.. +. +.-++.--...+..+...+.+ ..+|.++.||
T Consensus 1045 ~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~----~~~Av~t~DG 1120 (1431)
T KOG1240|consen 1045 HEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNG----DQFAVSTKDG 1120 (1431)
T ss_pred hhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCC----CeEEEEcCCC
Confidence 35788888777653 3 699999999999999963 11 122233344567777776633 3688899999
Q ss_pred cEEEEeccccccccCccccceeeeeeccc-cceEEE-EEe-CCCC-EEEEeeCCCcEEEEecCCCCCCCccceeeeccCC
Q 036314 91 TLRLWKFDAEELVNHPKKIRSFKILRGHK-ASVHSI-AAE-TSGN-MVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGN 166 (347)
Q Consensus 91 ~v~~wd~~~~~~~~~~~~~~~~~~~~~h~-~~V~~v-~~s-~~~~-~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~ 166 (347)
.|++.+++-.+.... ..........+. +.+.++ +|. .++. .++-+..-+.|..||+.......
T Consensus 1121 ~v~~~~id~~~~~~~--~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w----------- 1187 (1431)
T KOG1240|consen 1121 SVRVLRIDHYNVSKR--VATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAW----------- 1187 (1431)
T ss_pred eEEEEEccccccccc--eeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHH-----------
Confidence 999999875211000 011111222232 233333 332 2334 77778888999999986432100
Q ss_pred CccccccccccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeeeeCe--eeEEEEeeC--C-CCc
Q 036314 167 NQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGK--ALNCIDIGG--E-GSA 240 (347)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~--~~~~~~~~~--~-~~~ 240 (347)
........+.|++++. +.+..++.|...|.+.+||++=+.++..+..+. +++.+.+++ + ...
T Consensus 1188 ------------~lk~~~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~ 1255 (1431)
T KOG1240|consen 1188 ------------RLKNQLRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQESV 1255 (1431)
T ss_pred ------------hhhcCccccceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCcccCCcceEEeeccCCCCce
Confidence 0011112356778776 456789999999999999999888777776443 344444443 2 223
Q ss_pred EEEEec-CCCcEEEEeCCCCCCC--------CCeEEec--------CCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcC
Q 036314 241 LIAAGG-SDPILRIWDPRKPGTS--------APVFQFS--------SHNSWISACKWHNKSWFHLISASYDGKVMLWDLR 303 (347)
Q Consensus 241 ~la~~~-~d~~i~iwd~~~~~~~--------~~~~~~~--------~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~ 303 (347)
.+++++ ..+.|.+|++..+... .+..... .+.-....+.+. ++..++.+|+.|..||.||..
T Consensus 1256 ~vs~~~~~~nevs~wn~~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~-~~~~~~ltggsd~kIR~wD~~ 1334 (1431)
T KOG1240|consen 1256 SVSAGSSSNNEVSTWNMETGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVC-EKNGFLLTGGSDMKIRKWDPT 1334 (1431)
T ss_pred EEEecccCCCceeeeecccCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecc-cCCceeeecCCccceeeccCC
Confidence 444444 5789999998653211 0000000 111112223332 223469999999999999975
Q ss_pred CCccc-----------------------------e-------------------e--------ecCCCCeEEEEeec--C
Q 036314 304 TAWPL-----------------------------S-------------------V--------IDSHKDKVLCADWW--R 325 (347)
Q Consensus 304 ~~~~~-----------------------------~-------------------~--------~~~h~~~v~~~~~~--~ 325 (347)
..+.. . . -.+|.+.|..+++- +
T Consensus 1335 ~p~~ss~~~~~~s~~~~~~~~s~~~~~i~~~~~i~e~i~~~~tv~~t~~~~~~~~~~~~~~~ps~~H~d~Itdma~~~~~ 1414 (1431)
T KOG1240|consen 1335 RPEISSYAVPGPSTSYSTNSESYDLSTIPGSQFIDEFIIYQQTVGLTEALRENQKLRPGPSDPSTYHHDPITDMATLKSE 1414 (1431)
T ss_pred CcccccccccCccccccccchhccccccCCCccchhhhhhhhhcCchhhcccccccccCCCCCcccccchhhhhhhhccC
Confidence 43210 0 0 02477888888874 4
Q ss_pred CCEEEEccCCceEEEee
Q 036314 326 GDSVISGGVDSKLCVSS 342 (347)
Q Consensus 326 ~~~l~s~s~D~~v~vw~ 342 (347)
...|++++.||.|+||.
T Consensus 1415 q~llvs~s~dG~IkiWk 1431 (1431)
T KOG1240|consen 1415 QPLLVSSSRDGVIKIWK 1431 (1431)
T ss_pred ccEEEEecCCCeeeecC
Confidence 34799999999999993
No 195
>KOG1523 consensus Actin-related protein Arp2/3 complex, subunit ARPC1/p41-ARC [Cytoskeleton]
Probab=99.65 E-value=8.8e-14 Score=115.63 Aligned_cols=244 Identities=15% Similarity=0.241 Sum_probs=176.3
Q ss_pred EeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEee
Q 036314 59 ILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGS 138 (347)
Q Consensus 59 ~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs 138 (347)
.+.--..+|++.+|.++ ...+|.+-+..+|.||....++ .++...++..|...|+.|.|+|..+.|++++
T Consensus 5 ~~~~~~~pitchAwn~d----rt~iAv~~~~~evhiy~~~~~~------~w~~~htls~Hd~~vtgvdWap~snrIvtcs 74 (361)
T KOG1523|consen 5 VFHRLLEPITCHAWNSD----RTQIAVSPNNHEVHIYSMLGAD------LWEPAHTLSEHDKIVTGVDWAPKSNRIVTCS 74 (361)
T ss_pred EeeeccCceeeeeecCC----CceEEeccCCceEEEEEecCCC------CceeceehhhhCcceeEEeecCCCCceeEcc
Confidence 34444577999999874 3578999999999999987654 2567788999999999999999999999999
Q ss_pred CCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCC
Q 036314 139 WDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMG 217 (347)
Q Consensus 139 ~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~ 217 (347)
.|..-.+|...++.. -+..-.+..++.+..++.| |..+.++.||..+.|.||-.+..
T Consensus 75 ~drnayVw~~~~~~~----------------------WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~E 132 (361)
T KOG1523|consen 75 HDRNAYVWTQPSGGT----------------------WKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQE 132 (361)
T ss_pred CCCCccccccCCCCe----------------------eccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecc
Confidence 999999997643211 0112244557788899999 56778999999999999987654
Q ss_pred cee--e-ee--eeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCC-----CCCCCC----------CeEEecCCCCCeeE
Q 036314 218 KDL--S-DI--FCGKALNCIDIGGEGSALIAAGGSDPILRIWDPR-----KPGTSA----------PVFQFSSHNSWISA 277 (347)
Q Consensus 218 ~~~--~-~~--~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~-----~~~~~~----------~~~~~~~h~~~v~~ 277 (347)
..- . .+ .....+.++++++++ -++|+|+.|++.|+|..- ....+. .+..+..-.++|..
T Consensus 133 NdWWVsKhikkPirStv~sldWhpnn-VLlaaGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~ 211 (361)
T KOG1523|consen 133 NDWWVSKHIKKPIRSTVTSLDWHPNN-VLLAAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHG 211 (361)
T ss_pred cceehhhhhCCccccceeeeeccCCc-ceecccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceee
Confidence 321 1 11 123457899998765 578999999999999631 110110 12234456779999
Q ss_pred EEeCCCCCeEEEEEeCCCcEEEEEcCCCc-cceeecCCCCeEEEEeecCCCEEEEccCCc
Q 036314 278 CKWHNKSWFHLISASYDGKVMLWDLRTAW-PLSVIDSHKDKVLCADWWRGDSVISGGVDS 336 (347)
Q Consensus 278 v~~s~~~~~~l~s~s~D~~i~lwd~~~~~-~~~~~~~h~~~v~~~~~~~~~~l~s~s~D~ 336 (347)
+.|+|.|. .|+=.+.|+++.+=|...+. .++....-.=+.+++.|-....++.++.|.
T Consensus 212 v~fs~sG~-~lawv~Hds~v~~~da~~p~~~v~~~~~~~lP~ls~~~ise~~vv~ag~~c 270 (361)
T KOG1523|consen 212 VLFSPSGN-RLAWVGHDSTVSFVDAAGPSERVQSVATAQLPLLSVSWISENSVVAAGYDC 270 (361)
T ss_pred eEeCCCCC-EeeEecCCCceEEeecCCCchhccchhhccCCceeeEeecCCceeecCCCC
Confidence 99999996 49999999999999987764 233332222466788886666677777663
No 196
>KOG0322 consensus G-protein beta subunit-like protein GNB1L, contains WD repeats [General function prediction only]
Probab=99.64 E-value=5.9e-15 Score=119.43 Aligned_cols=258 Identities=18% Similarity=0.258 Sum_probs=171.9
Q ss_pred CCCcCCceeeccCCCCCEEEEEecCCeEEEEcCCCe-EEEEee-ccCCceEEEEEeecCCCceEEEEEccCCCcEEEEec
Q 036314 20 PSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAGGV-CTHILE-GHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKF 97 (347)
Q Consensus 20 ~~~h~~~v~~~~~~~~~~l~sg~~d~~i~iw~~~~~-~~~~l~-~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~ 97 (347)
+.+|...|+++-|-..++|.+|..-|.+.+|.+.+. ..-.+. .|...|+.+...|.+ .|.+=+.|+.+-+|++
T Consensus 10 LRp~~~~v~s~~fqa~~rL~sg~~~G~V~~w~lqt~r~~~~~r~~g~~~it~lq~~p~d-----~l~tqgRd~~L~lw~i 84 (323)
T KOG0322|consen 10 LRPHSSSVTSVLFQANERLMSGLSVGIVKMWVLQTERDLPLIRLFGRLFITNLQSIPND-----SLDTQGRDPLLILWTI 84 (323)
T ss_pred eccccchheehhhccchhhhcccccceEEEEEeecCccchhhhhhccceeeceeecCCc-----chhhcCCCceEEEEEc
Confidence 448999999999986778999999999999997543 233455 466778888887743 4788899999999997
Q ss_pred cccccc------------------cCcccc----------------------ceeee----eeccccceEEEEEe-CCCC
Q 036314 98 DAEELV------------------NHPKKI----------------------RSFKI----LRGHKASVHSIAAE-TSGN 132 (347)
Q Consensus 98 ~~~~~~------------------~~~~~~----------------------~~~~~----~~~h~~~V~~v~~s-~~~~ 132 (347)
..+..+ ..++.. ..... -.+-.+.+.+..+. ..+.
T Consensus 85 a~s~~i~i~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~Klgsvmc~~~~~~c~s 164 (323)
T KOG0322|consen 85 AYSAFISIHSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSERSKLGSVMCQDKDHACGS 164 (323)
T ss_pred cCcceEEEeeeeccccccccceeccCCCcchhheecCCcccchhhhhccCccceeEccCchhccccCceeeeeccccccc
Confidence 653211 000000 00000 11234455555532 2233
Q ss_pred --EEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeC-CCCeEEEEecCCcE
Q 036314 133 --MVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP-QQETIYSASWDHSV 209 (347)
Q Consensus 133 --~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~l~s~s~dg~v 209 (347)
+++.|=.+|.+-+||+..+...- ..+ + ..+.......|..+|.++.|. .-..=++++.+..+
T Consensus 165 ~~lllaGyEsghvv~wd~S~~~~~~------~~~--------~-~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl 229 (323)
T KOG0322|consen 165 TFLLLAGYESGHVVIWDLSTGDKII------QLP--------Q-SSKVESPNASHKQPVLSLDYASSCDRGISGGADDKL 229 (323)
T ss_pred eEEEEEeccCCeEEEEEccCCceee------ccc--------c-ccccccchhhccCcceeeeechhhcCCcCCCccccc
Confidence 45677889999999997642100 000 0 001223345688889888873 22233678888889
Q ss_pred EEEECCCC--cee-e-eeee-CeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCC
Q 036314 210 RTWDVEMG--KDL-S-DIFC-GKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKS 284 (347)
Q Consensus 210 ~vwd~~~~--~~~-~-~~~~-~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~ 284 (347)
..|.+... ... . .+.. +..+..+.+- +++.++|+++.|+.||+|..+. ..++..+.-|.+.|++++|+|+.
T Consensus 230 ~~~Sl~~s~gslq~~~e~~lknpGv~gvrIR-pD~KIlATAGWD~RiRVyswrt---l~pLAVLkyHsagvn~vAfspd~ 305 (323)
T KOG0322|consen 230 VMYSLNHSTGSLQIRKEITLKNPGVSGVRIR-PDGKILATAGWDHRIRVYSWRT---LNPLAVLKYHSAGVNAVAFSPDC 305 (323)
T ss_pred eeeeeccccCcccccceEEecCCCccceEEc-cCCcEEeecccCCcEEEEEecc---CCchhhhhhhhcceeEEEeCCCC
Confidence 99988643 211 1 1111 2235556664 4567999999999999999885 34577788899999999999996
Q ss_pred CeEEEEEeCCCcEEEEEc
Q 036314 285 WFHLISASYDGKVMLWDL 302 (347)
Q Consensus 285 ~~~l~s~s~D~~i~lwd~ 302 (347)
+ ++|++|.|++|-+|++
T Consensus 306 ~-lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 306 E-LMAAASKDARISLWKL 322 (323)
T ss_pred c-hhhhccCCceEEeeec
Confidence 4 6999999999999986
No 197
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.64 E-value=1.2e-13 Score=132.60 Aligned_cols=268 Identities=16% Similarity=0.227 Sum_probs=171.2
Q ss_pred EcCCCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeC
Q 036314 50 WKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAET 129 (347)
Q Consensus 50 w~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~ 129 (347)
|++.|..++.|..|...|..++.++... .+++|||.||+||+|+...-. ......+...++......+.++.+-+
T Consensus 1034 W~p~G~lVAhL~Ehs~~v~k~a~s~~~~---s~FvsgS~DGtVKvW~~~k~~--~~~~s~rS~ltys~~~sr~~~vt~~~ 1108 (1431)
T KOG1240|consen 1034 WNPRGILVAHLHEHSSAVIKLAVSSEHT---SLFVSGSDDGTVKVWNLRKLE--GEGGSARSELTYSPEGSRVEKVTMCG 1108 (1431)
T ss_pred CCccceEeehhhhccccccceeecCCCC---ceEEEecCCceEEEeeehhhh--cCcceeeeeEEEeccCCceEEEEecc
Confidence 8999999999999999999998877542 379999999999999975321 11122333344444577889999999
Q ss_pred CCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCC-ccceEEE-EeC--CC-CeEEEEe
Q 036314 130 SGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGH-TQCVSSV-VWP--QQ-ETIYSAS 204 (347)
Q Consensus 130 ~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~~-~~~--~~-~~l~s~s 204 (347)
.++.+|.++.||.|++.+++-....... ..+.+....+ .+++.++ +|. .+ ..++.+.
T Consensus 1109 ~~~~~Av~t~DG~v~~~~id~~~~~~~~------------------~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T 1170 (1431)
T KOG1240|consen 1109 NGDQFAVSTKDGSVRVLRIDHYNVSKRV------------------ATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYAT 1170 (1431)
T ss_pred CCCeEEEEcCCCeEEEEEccccccccce------------------eeeeecccccCCCceEEeecccccccceeEEEEE
Confidence 9999999999999999988642110000 0011111111 1223232 331 22 2566777
Q ss_pred cCCcEEEEECCCCceeeeeee---CeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEec-CCCCCeeEEEe
Q 036314 205 WDHSVRTWDVEMGKDLSDIFC---GKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFS-SHNSWISACKW 280 (347)
Q Consensus 205 ~dg~v~vwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~-~h~~~v~~v~~ 280 (347)
.-+.+..||+++...+-.+.. +..++.++.++. ++.++.|+..|.+.+||+|-.. ++..+. ++..++..+..
T Consensus 1171 ~~~~iv~~D~r~~~~~w~lk~~~~hG~vTSi~idp~-~~WlviGts~G~l~lWDLRF~~---~i~sw~~P~~~~i~~v~~ 1246 (1431)
T KOG1240|consen 1171 DLSRIVSWDTRMRHDAWRLKNQLRHGLVTSIVIDPW-CNWLVIGTSRGQLVLWDLRFRV---PILSWEHPARAPIRHVWL 1246 (1431)
T ss_pred eccceEEecchhhhhHHhhhcCccccceeEEEecCC-ceEEEEecCCceEEEEEeecCc---eeecccCcccCCcceEEe
Confidence 778899999987654433321 345777877654 5689999999999999998432 233331 33455655555
Q ss_pred CC---CCCeEEEEEe-CCCcEEEEEcCCCccceeecCC-------------------CCeEEEEeec-CCCEEEEccCCc
Q 036314 281 HN---KSWFHLISAS-YDGKVMLWDLRTAWPLSVIDSH-------------------KDKVLCADWW-RGDSVISGGVDS 336 (347)
Q Consensus 281 s~---~~~~~l~s~s-~D~~i~lwd~~~~~~~~~~~~h-------------------~~~v~~~~~~-~~~~l~s~s~D~ 336 (347)
+| .....+.+++ ..+.|-+|++.+|..-.++-.- .-......+. .+..+.+|+.|.
T Consensus 1247 ~~~~~~~S~~vs~~~~~~nevs~wn~~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~ 1326 (1431)
T KOG1240|consen 1247 CPTYPQESVSVSAGSSSNNEVSTWNMETGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDM 1326 (1431)
T ss_pred eccCCCCceEEEecccCCCceeeeecccCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecCCcc
Confidence 44 3334445555 5788999999988544433211 0011112222 345688999999
Q ss_pred eEEEeecc
Q 036314 337 KLCVSSGV 344 (347)
Q Consensus 337 ~v~vw~~~ 344 (347)
.|+.|+-.
T Consensus 1327 kIR~wD~~ 1334 (1431)
T KOG1240|consen 1327 KIRKWDPT 1334 (1431)
T ss_pred ceeeccCC
Confidence 99999864
No 198
>KOG1538 consensus Uncharacterized conserved protein WDR10, contains WD40 repeats [General function prediction only]
Probab=99.63 E-value=1.4e-14 Score=130.92 Aligned_cols=236 Identities=19% Similarity=0.315 Sum_probs=170.9
Q ss_pred CCCCcCCceeeccCC-CCCEEEEEecCCeEEEEcCC--CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEE
Q 036314 19 EPSLHDDWVSAVDGS-NPGFILTGCYDNLGRVWKAG--GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLW 95 (347)
Q Consensus 19 ~~~~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~--~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~w 95 (347)
.+.+|++-|.+++.+ +|..+|||+.|..|.+|... |.. --.|.+.|-++.|.|-. +.|+|++-. ..-+|
T Consensus 48 tLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG~L---kYSH~D~IQCMsFNP~~----h~LasCsLs-dFglW 119 (1081)
T KOG1538|consen 48 PLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEGIL---KYSHNDAIQCMSFNPIT----HQLASCSLS-DFGLW 119 (1081)
T ss_pred ccccccceEEEEEEccCCceeccCCCceeEEEeccccccee---eeccCCeeeEeecCchH----HHhhhcchh-hcccc
Confidence 467999999999988 67799999999999999853 422 22699999999998833 468888765 56788
Q ss_pred eccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccc
Q 036314 96 KFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLE 175 (347)
Q Consensus 96 d~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (347)
..+...... . .....|.+++|..||++++-|-.||||.|.+-...+ .
T Consensus 120 S~~qK~V~K----------~-kss~R~~~CsWtnDGqylalG~~nGTIsiRNk~gEe-k--------------------- 166 (1081)
T KOG1538|consen 120 SPEQKSVSK----------H-KSSSRIICCSWTNDGQYLALGMFNGTISIRNKNGEE-K--------------------- 166 (1081)
T ss_pred ChhhhhHHh----------h-hhheeEEEeeecCCCcEEEEeccCceEEeecCCCCc-c---------------------
Confidence 865322110 0 124557788999999999999999999998543211 0
Q ss_pred ccccccccCCccceEEEEeCC------CCeEEEEecCCcEEEEECCCCceeeee-eeCeeeEEEEeeCCCCcEEEEecCC
Q 036314 176 GEAISTLVGHTQCVSSVVWPQ------QETIYSASWDHSVRTWDVEMGKDLSDI-FCGKALNCIDIGGEGSALIAAGGSD 248 (347)
Q Consensus 176 ~~~~~~~~~h~~~v~~~~~~~------~~~l~s~s~dg~v~vwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~la~~~~d 248 (347)
..+...-|.+.+|++++|.+ .+.++...+..++..|.+. |+.+..- ..+-...|+...+++ .++..|+.|
T Consensus 167 -~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~Ls-G~~Igk~r~L~FdP~CisYf~NG-Ey~LiGGsd 243 (1081)
T KOG1538|consen 167 -VKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQLS-GKQIGKDRALNFDPCCISYFTNG-EYILLGGSD 243 (1081)
T ss_pred -eEEeCCCCCCCCceEEEecCCCCCCccceEEEEeccceeEEEEec-ceeecccccCCCCchhheeccCC-cEEEEccCC
Confidence 01222345678899999832 2468888999999999874 4444321 122345677776655 567788999
Q ss_pred CcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcC
Q 036314 249 PILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLR 303 (347)
Q Consensus 249 ~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~ 303 (347)
+.+++|... ...+-++.....||+.+...|++.+ ++.|+-||+|.-|++-
T Consensus 244 k~L~~fTR~----GvrLGTvg~~D~WIWtV~~~PNsQ~-v~~GCqDGTiACyNl~ 293 (1081)
T KOG1538|consen 244 KQLSLFTRD----GVRLGTVGEQDSWIWTVQAKPNSQY-VVVGCQDGTIACYNLI 293 (1081)
T ss_pred CceEEEeec----CeEEeeccccceeEEEEEEccCCce-EEEEEccCeeehhhhH
Confidence 999999743 2235566667789999999999864 8999999999998764
No 199
>KOG0771 consensus Prolactin regulatory element-binding protein/Protein transport protein SEC12p [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.61 E-value=2.6e-14 Score=122.81 Aligned_cols=193 Identities=19% Similarity=0.208 Sum_probs=134.9
Q ss_pred EEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CCCCeEE
Q 036314 123 HSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIY 201 (347)
Q Consensus 123 ~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~ 201 (347)
.+++|+.+|..+++|+.||++|+|+.++.. .+.....|...|.++.| ++++.|+
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~-------------------------t~l~e~~~~~eV~DL~FS~dgk~la 202 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWPSML-------------------------TILEEIAHHAEVKDLDFSPDGKFLA 202 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecCcch-------------------------hhhhhHhhcCccccceeCCCCcEEE
Confidence 578999999999999999999999865431 23344568889999999 5788999
Q ss_pred EEecCCcEEEEECCCCceeeeeee-Ce--eeEEEEeeCCC---C-cEEEEecCCCcEEEEeCCCCC--CCCCeEEecCCC
Q 036314 202 SASWDHSVRTWDVEMGKDLSDIFC-GK--ALNCIDIGGEG---S-ALIAAGGSDPILRIWDPRKPG--TSAPVFQFSSHN 272 (347)
Q Consensus 202 s~s~dg~v~vwd~~~~~~~~~~~~-~~--~~~~~~~~~~~---~-~~la~~~~d~~i~iwd~~~~~--~~~~~~~~~~h~ 272 (347)
+.+.| ..+||+++++..+..... .+ ....+-|..++ . .+++.....+.|+.||+..-. ...+..+...-.
T Consensus 203 sig~d-~~~VW~~~~g~~~a~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~ 281 (398)
T KOG0771|consen 203 SIGAD-SARVWSVNTGAALARKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRF 281 (398)
T ss_pred EecCC-ceEEEEeccCchhhhcCCcccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhcc
Confidence 99999 899999999966544431 11 12222332221 1 223333445667766653211 111222222334
Q ss_pred CCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceee-cCCCCeEEEEeecCCC-EEEEccCCceEEEee
Q 036314 273 SWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVI-DSHKDKVLCADWWRGD-SVISGGVDSKLCVSS 342 (347)
Q Consensus 273 ~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~-~~h~~~v~~~~~~~~~-~l~s~s~D~~v~vw~ 342 (347)
+.|++++.+++|. ++|-|+.||.|-|++..+.+.++-. +.|...|+.+.|+|+. ++++.|.|.+..|-.
T Consensus 282 ~siSsl~VS~dGk-f~AlGT~dGsVai~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~ 352 (398)
T KOG0771|consen 282 KSISSLAVSDDGK-FLALGTMDGSVAIYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLASVSSDNEAAVTK 352 (398)
T ss_pred CcceeEEEcCCCc-EEEEeccCCcEEEEEeceeeeeEeehhhheeeeeeEEEcCCcCcccccccCCceeEEE
Confidence 4699999999985 6999999999999999887665543 6899999999998754 688888888776643
No 200
>KOG1524 consensus WD40 repeat-containing protein CHE-2 [General function prediction only]
Probab=99.59 E-value=5.7e-14 Score=124.06 Aligned_cols=170 Identities=14% Similarity=0.248 Sum_probs=132.2
Q ss_pred CCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CCCCeEEEEecCCcE
Q 036314 131 GNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSV 209 (347)
Q Consensus 131 ~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v 209 (347)
...++-++.||.+.|.+-. +...+....|..++.+-.| |+|.-|++++.||.|
T Consensus 75 ~d~~~i~s~DGkf~il~k~--------------------------~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~i 128 (737)
T KOG1524|consen 75 SDTLLICSNDGRFVILNKS--------------------------ARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVI 128 (737)
T ss_pred cceEEEEcCCceEEEeccc--------------------------chhhhhhhhhhhhhhhcccCCCCceeeeecCCceE
Confidence 4678888999999887532 1223456778888888888 578889999999999
Q ss_pred EEEECCCCceeeee-eeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEE
Q 036314 210 RTWDVEMGKDLSDI-FCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHL 288 (347)
Q Consensus 210 ~vwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l 288 (347)
++|. ++|....++ +...++.|+++.|+..+.+.+.+ +.+.|=.+... ..+..+..|.+-|.++.|+|... ++
T Consensus 129 KiWS-rsGMLRStl~Q~~~~v~c~~W~p~S~~vl~c~g--~h~~IKpL~~n---~k~i~WkAHDGiiL~~~W~~~s~-lI 201 (737)
T KOG1524|consen 129 KIWS-RSGMLRSTVVQNEESIRCARWAPNSNSIVFCQG--GHISIKPLAAN---SKIIRWRAHDGLVLSLSWSTQSN-II 201 (737)
T ss_pred EEEe-ccchHHHHHhhcCceeEEEEECCCCCceEEecC--CeEEEeecccc---cceeEEeccCcEEEEeecCcccc-ce
Confidence 9997 566543333 34568999999988877766544 55666555432 23568889999999999999875 79
Q ss_pred EEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeecCCCEEEEccC
Q 036314 289 ISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGGV 334 (347)
Q Consensus 289 ~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~ 334 (347)
+||++|-..+|||-- |.++..-..|..+|++++|.|+..++.+|.
T Consensus 202 ~sgGED~kfKvWD~~-G~~Lf~S~~~ey~ITSva~npd~~~~v~S~ 246 (737)
T KOG1524|consen 202 ASGGEDFRFKIWDAQ-GANLFTSAAEEYAITSVAFNPEKDYLLWSY 246 (737)
T ss_pred eecCCceeEEeeccc-CcccccCChhccceeeeeeccccceeeeee
Confidence 999999999999985 778888889999999999998876776664
No 201
>KOG1009 consensus Chromatin assembly complex 1 subunit B/CAC2 (contains WD40 repeats) [Chromatin structure and dynamics; Replication, recombination and repair]
Probab=99.58 E-value=1.4e-14 Score=123.66 Aligned_cols=179 Identities=23% Similarity=0.304 Sum_probs=133.8
Q ss_pred ccceEEEEEeCCCC-EEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CC
Q 036314 119 KASVHSIAAETSGN-MVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQ 196 (347)
Q Consensus 119 ~~~V~~v~~s~~~~-~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~ 196 (347)
..+|.++.|.++.. .++||+.|..|+||.+......+... .-+.+..+..|+.+|+.+.| |+
T Consensus 13 ~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~----------------~V~y~s~Ls~H~~aVN~vRf~p~ 76 (434)
T KOG1009|consen 13 HEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDM----------------KVEYLSSLSRHTRAVNVVRFSPD 76 (434)
T ss_pred CCceEEEEeccCcccceecccCccceeeeeeeecCCCCCce----------------eEEEeecccCCcceeEEEEEcCC
Confidence 45789999988876 99999999999999987654433211 11235578889999999998 68
Q ss_pred CCeEEEEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCee
Q 036314 197 QETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWIS 276 (347)
Q Consensus 197 ~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~ 276 (347)
++.|+||+.+|.+.+|-...- .+. ..+. -.+. .++.....+.+.+|.+.|.
T Consensus 77 gelLASg~D~g~v~lWk~~~~-~~~--------------~~d~------e~~~--------~ke~w~v~k~lr~h~~diy 127 (434)
T KOG1009|consen 77 GELLASGGDGGEVFLWKQGDV-RIF--------------DADT------EADL--------NKEKWVVKKVLRGHRDDIY 127 (434)
T ss_pred cCeeeecCCCceEEEEEecCc-CCc--------------cccc------hhhh--------CccceEEEEEecccccchh
Confidence 899999999999999975430 000 0000 0000 0011122345667999999
Q ss_pred EEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeecC-CCEEEEccCCceEEEeec
Q 036314 277 ACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKLCVSSG 343 (347)
Q Consensus 277 ~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~D~~v~vw~~ 343 (347)
.++|+|++. ++++++.|..+++||+..|+.+..+.+|..-|..++|-| .+++++=|.|...++.+-
T Consensus 128 dL~Ws~d~~-~l~s~s~dns~~l~Dv~~G~l~~~~~dh~~yvqgvawDpl~qyv~s~s~dr~~~~~~~ 194 (434)
T KOG1009|consen 128 DLAWSPDSN-FLVSGSVDNSVRLWDVHAGQLLAILDDHEHYVQGVAWDPLNQYVASKSSDRHPEGFSA 194 (434)
T ss_pred hhhccCCCc-eeeeeeccceEEEEEeccceeEeeccccccccceeecchhhhhhhhhccCcccceeee
Confidence 999999985 699999999999999999999999999999999999976 667888888886555443
No 202
>KOG0280 consensus Uncharacterized conserved protein [Amino acid transport and metabolism]
Probab=99.58 E-value=8.8e-13 Score=108.56 Aligned_cols=248 Identities=17% Similarity=0.179 Sum_probs=161.7
Q ss_pred CceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEE
Q 036314 65 GAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTIS 144 (347)
Q Consensus 65 ~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~ 144 (347)
..++.+.|..-.......++-+-.+|.|.++.....+.... .+++...+-......++.|++.+..++++-.+|.+.
T Consensus 70 s~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~ss~~---L~~ls~~ki~~~~~lslD~~~~~~~i~vs~s~G~~~ 146 (339)
T KOG0280|consen 70 STEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDESSVH---LRGLSSKKISVVEALSLDISTSGTKIFVSDSRGSIS 146 (339)
T ss_pred cccceeeeeeccCCccceeeeccccceEEEEeeccceeeee---ecccchhhhhheeeeEEEeeccCceEEEEcCCCcEE
Confidence 34566666531111113577788899999998654321100 011110000111234677899999999998899888
Q ss_pred EEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeC--CCCeEEEEecCCcEEEEECCCCc-eee
Q 036314 145 LWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP--QQETIYSASWDHSVRTWDVEMGK-DLS 221 (347)
Q Consensus 145 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~l~s~s~dg~v~vwd~~~~~-~~~ 221 (347)
+-+..... -+..++++.|.-+.+-..|+ +.+.+++|+.|+.+..||++.+. .+-
T Consensus 147 ~v~~t~~~-----------------------le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~ 203 (339)
T KOG0280|consen 147 GVYETEMV-----------------------LEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIW 203 (339)
T ss_pred EEecceee-----------------------eeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcceee
Confidence 44332211 12245778898888888775 34678999999999999999433 221
Q ss_pred e--eeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEE
Q 036314 222 D--IFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVML 299 (347)
Q Consensus 222 ~--~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~l 299 (347)
. ..+...+.++.-+++.+..+++|++|..|++||.|+-+++ ++.- .-.+.|+.+.++|.....|+.++.-.-.+|
T Consensus 204 ~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kP--l~~~-~v~GGVWRi~~~p~~~~~lL~~CMh~G~ki 280 (339)
T KOG0280|consen 204 HNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKP--LFKA-KVGGGVWRIKHHPEIFHRLLAACMHNGAKI 280 (339)
T ss_pred ecceeeecceEEEecCCCCCceEEEeccccceeeeehhcccCc--cccC-ccccceEEEEecchhhhHHHHHHHhcCceE
Confidence 1 1123467778777888889999999999999999965443 3321 233689999999976544555666666888
Q ss_pred EEcCCCcc-----ceeecCCCCeEEEEeec-CCCEEEEcc-CCceEE-Ee
Q 036314 300 WDLRTAWP-----LSVIDSHKDKVLCADWW-RGDSVISGG-VDSKLC-VS 341 (347)
Q Consensus 300 wd~~~~~~-----~~~~~~h~~~v~~~~~~-~~~~l~s~s-~D~~v~-vw 341 (347)
-+...+.. ......|.+-+++.+|. ....|||+| .|+.++ +|
T Consensus 281 ~~~~~~~~e~~~~~~s~~~hdSl~YG~DWd~~~~~lATCsFYDk~~~~~W 330 (339)
T KOG0280|consen 281 LDSSDKVLEFQIVLPSDKIHDSLCYGGDWDSKDSFLATCSFYDKKIRQLW 330 (339)
T ss_pred EEecccccchheeeeccccccceeeccccccccceeeeeeccccceeeee
Confidence 88876532 23456788888998993 445699988 588855 77
No 203
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.57 E-value=2.7e-13 Score=125.10 Aligned_cols=210 Identities=12% Similarity=0.105 Sum_probs=134.4
Q ss_pred CCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCC---CcEEEEecCCCCCCCccceeeeccC
Q 036314 89 DQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWD---CTISLWRTNDSDAAGNQVSIKKRKG 165 (347)
Q Consensus 89 Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~D---g~I~iwd~~~~~~~~~~~~~~~~~~ 165 (347)
+.+|.+||.+... ...+..|...+.+.+|+|||+.|+..+.+ ..|++||+.++..
T Consensus 183 ~~~i~i~d~dg~~----------~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~------------ 240 (429)
T PRK01742 183 PYEVRVADYDGFN----------QFIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGAR------------ 240 (429)
T ss_pred eEEEEEECCCCCC----------ceEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCce------------
Confidence 5789999987542 23456788889999999999999887654 3699999865321
Q ss_pred CCccccccccccccccccCCccceEEEEe-CCCCeEEEE-ecCCcEEEE--ECCCCceeeeeee-CeeeEEEEeeCCCCc
Q 036314 166 NNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSA-SWDHSVRTW--DVEMGKDLSDIFC-GKALNCIDIGGEGSA 240 (347)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~-s~dg~v~vw--d~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 240 (347)
+.+..+.+|.. .+.| |+++.|+.+ +.+|.+.|| |+.++.. ..+.. ........|+|++..
T Consensus 241 -----------~~l~~~~g~~~---~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~~~~-~~lt~~~~~~~~~~wSpDG~~ 305 (429)
T PRK01742 241 -----------KVVASFRGHNG---APAFSPDGSRLAFASSKDGVLNIYVMGANGGTP-SQLTSGAGNNTEPSWSPDGQS 305 (429)
T ss_pred -----------EEEecCCCccC---ceeECCCCCEEEEEEecCCcEEEEEEECCCCCe-EeeccCCCCcCCEEECCCCCE
Confidence 11222333332 3566 677877765 468877666 6555543 33332 223556788777665
Q ss_pred EEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEE
Q 036314 241 LIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLC 320 (347)
Q Consensus 241 ~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~ 320 (347)
+++++..++...||++...+.. ...+ .+.. ....|+|++.. |+.++.++ +.+||+.+++.......+ ....
T Consensus 306 i~f~s~~~g~~~I~~~~~~~~~--~~~l-~~~~--~~~~~SpDG~~-ia~~~~~~-i~~~Dl~~g~~~~lt~~~--~~~~ 376 (429)
T PRK01742 306 ILFTSDRSGSPQVYRMSASGGG--ASLV-GGRG--YSAQISADGKT-LVMINGDN-VVKQDLTSGSTEVLSSTF--LDES 376 (429)
T ss_pred EEEEECCCCCceEEEEECCCCC--eEEe-cCCC--CCccCCCCCCE-EEEEcCCC-EEEEECCCCCeEEecCCC--CCCC
Confidence 6556666788899987542221 2222 3433 35789999975 66666665 556999887643322222 2345
Q ss_pred EeecC-CCEEEEccCCceEEEeecc
Q 036314 321 ADWWR-GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 321 ~~~~~-~~~l~s~s~D~~v~vw~~~ 344 (347)
+.|+| |+.|+.++.++.+.+|...
T Consensus 377 ~~~sPdG~~i~~~s~~g~~~~l~~~ 401 (429)
T PRK01742 377 PSISPNGIMIIYSSTQGLGKVLQLV 401 (429)
T ss_pred ceECCCCCEEEEEEcCCCceEEEEE
Confidence 77875 6788988889988887643
No 204
>KOG1334 consensus WD40 repeat protein [General function prediction only]
Probab=99.56 E-value=1.3e-13 Score=120.40 Aligned_cols=252 Identities=19% Similarity=0.274 Sum_probs=177.0
Q ss_pred EEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCC--CCEEE
Q 036314 58 HILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETS--GNMVC 135 (347)
Q Consensus 58 ~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~--~~~l~ 135 (347)
..|..|.+.|+.|.|... +..|+|+|.|..|.+||...+... +.-..||...|....|-|. .+.++
T Consensus 136 ~kL~~H~GcVntV~FN~~----Gd~l~SgSDD~~vv~WdW~~~~~~--------l~f~SGH~~NvfQaKFiP~s~d~ti~ 203 (559)
T KOG1334|consen 136 KKLNKHKGCVNTVHFNQR----GDVLASGSDDLQVVVWDWVSGSPK--------LSFESGHCNNVFQAKFIPFSGDRTIV 203 (559)
T ss_pred hcccCCCCccceeeeccc----CceeeccCccceEEeehhhccCcc--------cccccccccchhhhhccCCCCCcCce
Confidence 468899999999999773 457999999999999998765421 1223578888887777664 36889
Q ss_pred EeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CCC-CeEEEEecCCcEEEEE
Q 036314 136 SGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQ-ETIYSASWDHSVRTWD 213 (347)
Q Consensus 136 sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~-~~l~s~s~dg~v~vwd 213 (347)
+++.||.+++=.+..... .+ -...+..|.+.|..++. |.. ..|+|++.|+.+.-.|
T Consensus 204 ~~s~dgqvr~s~i~~t~~--------------------~e--~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~D 261 (559)
T KOG1334|consen 204 TSSRDGQVRVSEILETGY--------------------VE--NTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHID 261 (559)
T ss_pred eccccCceeeeeeccccc--------------------ee--cceecccccCccceeeecCCCCCcccccccccceeeee
Confidence 999999999865432110 00 01234457788888876 433 4589999999999999
Q ss_pred CCCCceeeeeeeC----e---eeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCC---CCeEEecCCC------CCeeE
Q 036314 214 VEMGKDLSDIFCG----K---ALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTS---APVFQFSSHN------SWISA 277 (347)
Q Consensus 214 ~~~~~~~~~~~~~----~---~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~---~~~~~~~~h~------~~v~~ 277 (347)
++.+.+...+.+. . ....++..|.+.+.+|+|+.|..+++||.+..... ..+..+..|. -.|++
T Consensus 262 lr~~~pa~~~~cr~~~~~~~v~L~~Ia~~P~nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITg 341 (559)
T KOG1334|consen 262 LRQDVPAEKFVCREADEKERVGLYTIAVDPRNTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITG 341 (559)
T ss_pred eccCCccceeeeeccCCccceeeeeEecCCCCccccccCChhhhhhhhcccchhhccccchhhhcCCccccccCccccee
Confidence 9987765554331 1 35677888888888999999999999998753211 1122332222 25899
Q ss_pred EEeCCCCCeEEEEEeCCCcEEEEEcCC--C----------ccce-eecCCCC--eEEEEeec-C-CCEEEEccCCceEEE
Q 036314 278 CKWHNKSWFHLISASYDGKVMLWDLRT--A----------WPLS-VIDSHKD--KVLCADWW-R-GDSVISGGVDSKLCV 340 (347)
Q Consensus 278 v~~s~~~~~~l~s~s~D~~i~lwd~~~--~----------~~~~-~~~~h~~--~v~~~~~~-~-~~~l~s~s~D~~v~v 340 (347)
++|+.++.. |+++=.|-.|.++.-.- | ..++ .+.||.+ .|.+|-|. | ..+++|||.-|.|.|
T Consensus 342 l~Ysh~~sE-lLaSYnDe~IYLF~~~~~~G~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFi 420 (559)
T KOG1334|consen 342 LVYSHDGSE-LLASYNDEDIYLFNKSMGDGSEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFI 420 (559)
T ss_pred EEecCCccc-eeeeecccceEEeccccccCCCCCCCcchhhccchhhcccccccccceeeeccCccceEEecCccceEEE
Confidence 999977766 44455677788884332 2 1122 3778875 57789996 4 668999999999999
Q ss_pred eecc
Q 036314 341 SSGV 344 (347)
Q Consensus 341 w~~~ 344 (347)
|+-.
T Consensus 421 W~K~ 424 (559)
T KOG1334|consen 421 WDKK 424 (559)
T ss_pred Eecc
Confidence 9853
No 205
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.54 E-value=9.8e-12 Score=114.63 Aligned_cols=232 Identities=13% Similarity=0.106 Sum_probs=141.6
Q ss_pred eEEEEcCCCeEEEEeeccCCceEEEEEeecCCCceEEEEEc---cCCCcEEEEeccccccccCccccceeeeeeccccce
Q 036314 46 LGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATA---SKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASV 122 (347)
Q Consensus 46 ~i~iw~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~---s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V 122 (347)
.+.+||..|...+.+..+...+.+.+|+|++. .|+.. +.+..|.+|++.+++. +.+..+.+| +
T Consensus 180 ~l~~~d~dg~~~~~lt~~~~~~~~p~wSPDG~----~la~~s~~~g~~~i~i~dl~~G~~-------~~l~~~~~~---~ 245 (429)
T PRK03629 180 ELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGS----KLAYVTFESGRSALVIQTLANGAV-------RQVASFPRH---N 245 (429)
T ss_pred eEEEEcCCCCCCEEeecCCCceeeeEEcCCCC----EEEEEEecCCCcEEEEEECCCCCe-------EEccCCCCC---c
Confidence 68888887765566667777899999999653 34433 2345799999876542 122223333 4
Q ss_pred EEEEEeCCCCEEEE-eeCCC--cEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CCCC
Q 036314 123 HSIAAETSGNMVCS-GSWDC--TISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQE 198 (347)
Q Consensus 123 ~~v~~s~~~~~l~s-gs~Dg--~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~ 198 (347)
...+|+|||+.|+. .+.++ .|.+||+.++.. ..+..+...+....| |+++
T Consensus 246 ~~~~~SPDG~~La~~~~~~g~~~I~~~d~~tg~~--------------------------~~lt~~~~~~~~~~wSPDG~ 299 (429)
T PRK03629 246 GAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI--------------------------RQVTDGRSNNTEPTWFPDSQ 299 (429)
T ss_pred CCeEECCCCCEEEEEEcCCCCcEEEEEECCCCCE--------------------------EEccCCCCCcCceEECCCCC
Confidence 46789999987764 45555 477788764321 111122223445566 5778
Q ss_pred eEEEEecC-CcEEEE--ECCCCceeeeeee-CeeeEEEEeeCCCCcEEEEecCC--CcEEEEeCCCCCCCCCeEEecCCC
Q 036314 199 TIYSASWD-HSVRTW--DVEMGKDLSDIFC-GKALNCIDIGGEGSALIAAGGSD--PILRIWDPRKPGTSAPVFQFSSHN 272 (347)
Q Consensus 199 ~l~s~s~d-g~v~vw--d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~la~~~~d--~~i~iwd~~~~~~~~~~~~~~~h~ 272 (347)
.|+.++.+ +..+|| |+.++.. ..+.. ........++|++..++.++..+ ..|.+||+.... ...+...
T Consensus 300 ~I~f~s~~~g~~~Iy~~d~~~g~~-~~lt~~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~----~~~Lt~~- 373 (429)
T PRK03629 300 NLAYTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG----VQVLTDT- 373 (429)
T ss_pred EEEEEeCCCCCceEEEEECCCCCe-EEeecCCCCccCEEECCCCCEEEEEEccCCCceEEEEECCCCC----eEEeCCC-
Confidence 78766654 455555 6655543 33322 22344567777665554444433 357888886432 2233322
Q ss_pred CCeeEEEeCCCCCeEEEEEeCCCc---EEEEEcCCCccceeecCCCCeEEEEeecC
Q 036314 273 SWISACKWHNKSWFHLISASYDGK---VMLWDLRTAWPLSVIDSHKDKVLCADWWR 325 (347)
Q Consensus 273 ~~v~~v~~s~~~~~~l~s~s~D~~---i~lwd~~~~~~~~~~~~h~~~v~~~~~~~ 325 (347)
.......|+|||.. |+.++.++. +.+++++ +.....+.+|.+.+...+|+|
T Consensus 374 ~~~~~p~~SpDG~~-i~~~s~~~~~~~l~~~~~~-G~~~~~l~~~~~~~~~p~Wsp 427 (429)
T PRK03629 374 FLDETPSIAPNGTM-VIYSSSQGMGSVLNLVSTD-GRFKARLPATDGQVKFPAWSP 427 (429)
T ss_pred CCCCCceECCCCCE-EEEEEcCCCceEEEEEECC-CCCeEECccCCCCcCCcccCC
Confidence 12346789999975 666776654 6777874 556677778888899899975
No 206
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.54 E-value=2.5e-11 Score=108.49 Aligned_cols=249 Identities=12% Similarity=0.168 Sum_probs=141.7
Q ss_pred CceeeccCC-CCCEEEEEe-cCCeEEEEcCC--CeEEE-EeeccCCceEEEEEeecCCCceEEEEEc-cCCCcEEEEecc
Q 036314 25 DWVSAVDGS-NPGFILTGC-YDNLGRVWKAG--GVCTH-ILEGHCGAVSSVNIIKSDGLKYVTVATA-SKDQTLRLWKFD 98 (347)
Q Consensus 25 ~~v~~~~~~-~~~~l~sg~-~d~~i~iw~~~--~~~~~-~l~~h~~~V~~v~~~~~~~~~~~~l~s~-s~Dg~v~~wd~~ 98 (347)
+....+.++ ++++|+.++ .++.|.+|+.. +.... .-....+....+.|+|++. .|+++ ..++.|.+|+++
T Consensus 35 ~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~~~~~p~~i~~~~~g~----~l~v~~~~~~~v~v~~~~ 110 (330)
T PRK11028 35 GQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAESPLPGSPTHISTDHQGR----FLFSASYNANCVSVSPLD 110 (330)
T ss_pred CCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeeecCCCCceEEEECCCCC----EEEEEEcCCCeEEEEEEC
Confidence 445566766 456665554 57889999864 32211 1111234567888988543 34444 458899999986
Q ss_pred ccccccCccccceeeeeeccccceEEEEEeCCCCEEE-EeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccccc
Q 036314 99 AEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVC-SGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGE 177 (347)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~-sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (347)
...... +....+. +....++++++|++++++ +...++.|.+||+.+........ ..
T Consensus 111 ~~g~~~-----~~~~~~~-~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~-----------------~~ 167 (330)
T PRK11028 111 KDGIPV-----APIQIIE-GLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQE-----------------PA 167 (330)
T ss_pred CCCCCC-----Cceeecc-CCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccccC-----------------CC
Confidence 432110 1122222 234467789999998885 45567999999986521100000 00
Q ss_pred ccccccCCccceEEEEe-CCCCeEEEEec-CCcEEEEECCC--Cc--eeeeeee--C-----eeeEEEEeeCCCCcEEEE
Q 036314 178 AISTLVGHTQCVSSVVW-PQQETIYSASW-DHSVRTWDVEM--GK--DLSDIFC--G-----KALNCIDIGGEGSALIAA 244 (347)
Q Consensus 178 ~~~~~~~h~~~v~~~~~-~~~~~l~s~s~-dg~v~vwd~~~--~~--~~~~~~~--~-----~~~~~~~~~~~~~~~la~ 244 (347)
......+ .....+.| |++++++++.. +++|.+||+.. +. .+..+.. . .....+.++|++..++++
T Consensus 168 ~~~~~~g--~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~ 245 (330)
T PRK11028 168 EVTTVEG--AGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYAC 245 (330)
T ss_pred ceecCCC--CCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEe
Confidence 0000011 12334555 67788877765 89999999973 22 1222211 0 011246676665544444
Q ss_pred ecCCCcEEEEeCCCCCCCC-CeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcC
Q 036314 245 GGSDPILRIWDPRKPGTSA-PVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLR 303 (347)
Q Consensus 245 ~~~d~~i~iwd~~~~~~~~-~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~ 303 (347)
...++.|.+|++...+... ....... ......+.++|++.+++++...+++|.+|+++
T Consensus 246 ~~~~~~I~v~~i~~~~~~~~~~~~~~~-~~~p~~~~~~~dg~~l~va~~~~~~v~v~~~~ 304 (330)
T PRK11028 246 DRTASLISVFSVSEDGSVLSFEGHQPT-ETQPRGFNIDHSGKYLIAAGQKSHHISVYEID 304 (330)
T ss_pred cCCCCeEEEEEEeCCCCeEEEeEEEec-cccCCceEECCCCCEEEEEEccCCcEEEEEEc
Confidence 4558899999986432111 1111111 12456789999998755565569999999885
No 207
>KOG0771 consensus Prolactin regulatory element-binding protein/Protein transport protein SEC12p [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.51 E-value=5.2e-13 Score=114.88 Aligned_cols=196 Identities=20% Similarity=0.273 Sum_probs=127.0
Q ss_pred EEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEe
Q 036314 68 SSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWR 147 (347)
Q Consensus 68 ~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd 147 (347)
..++|.+++ ..|++++.||++|+|+.+..+ .+.....|...|.++.|+|||++|++-+.| ..+||+
T Consensus 148 k~vaf~~~g----s~latgg~dg~lRv~~~Ps~~---------t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~ 213 (398)
T KOG0771|consen 148 KVVAFNGDG----SKLATGGTDGTLRVWEWPSML---------TILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWS 213 (398)
T ss_pred eEEEEcCCC----CEeeeccccceEEEEecCcch---------hhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEE
Confidence 456777644 369999999999999965432 222345789999999999999999999999 999999
Q ss_pred cCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeCC---CC--eEE-EEecCCcEEEEECCCCce--
Q 036314 148 TNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQ---QE--TIY-SASWDHSVRTWDVEMGKD-- 219 (347)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~---~~--~l~-s~s~dg~v~vwd~~~~~~-- 219 (347)
++++....... +....+ -...+-|.. ++ +++ ....-+.|+.||+..-+.
T Consensus 214 ~~~g~~~a~~t----------~~~k~~-------------~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~ 270 (398)
T KOG0771|consen 214 VNTGAALARKT----------PFSKDE-------------MFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSN 270 (398)
T ss_pred eccCchhhhcC----------Ccccch-------------hhhhceecccCCCceEEEEEecCCCCceeEEEeeeecccc
Confidence 98763211100 000000 001111211 11 122 222233455555432111
Q ss_pred ---e-eeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCC
Q 036314 220 ---L-SDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDG 295 (347)
Q Consensus 220 ---~-~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~ 295 (347)
. ..+...+.+.+++.+ +++.++|.|+.||.|.|++...-.. ....-..|...|+.+.|+|+.++ +++.+.|.
T Consensus 271 ~l~~~~~~~~~~siSsl~VS-~dGkf~AlGT~dGsVai~~~~~lq~--~~~vk~aH~~~VT~ltF~Pdsr~-~~svSs~~ 346 (398)
T KOG0771|consen 271 FLRLRKKIKRFKSISSLAVS-DDGKFLALGTMDGSVAIYDAKSLQR--LQYVKEAHLGFVTGLTFSPDSRY-LASVSSDN 346 (398)
T ss_pred ccchhhhhhccCcceeEEEc-CCCcEEEEeccCCcEEEEEeceeee--eEeehhhheeeeeeEEEcCCcCc-ccccccCC
Confidence 1 111223468889985 4567999999999999999864321 23344678899999999999864 89999999
Q ss_pred cEEEEEcCC
Q 036314 296 KVMLWDLRT 304 (347)
Q Consensus 296 ~i~lwd~~~ 304 (347)
+++|..+.-
T Consensus 347 ~~~v~~l~v 355 (398)
T KOG0771|consen 347 EAAVTKLAV 355 (398)
T ss_pred ceeEEEEee
Confidence 999987754
No 208
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.50 E-value=1.1e-11 Score=114.25 Aligned_cols=235 Identities=13% Similarity=0.105 Sum_probs=139.6
Q ss_pred CeEEEEcCCCeEEEEeeccCCceEEEEEeecCCCceEEEEEccC---CCcEEEEeccccccccCccccceeeeeeccccc
Q 036314 45 NLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASK---DQTLRLWKFDAEELVNHPKKIRSFKILRGHKAS 121 (347)
Q Consensus 45 ~~i~iw~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~---Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~ 121 (347)
..+.+||..|...+.+..+...+.+.+|+|++. .|+..+. ...|.+||+.+++. ..+......
T Consensus 176 ~~L~~~D~dG~~~~~l~~~~~~v~~p~wSPDG~----~la~~s~~~~~~~I~~~dl~~g~~----------~~l~~~~g~ 241 (427)
T PRK02889 176 YQLQISDADGQNAQSALSSPEPIISPAWSPDGT----KLAYVSFESKKPVVYVHDLATGRR----------RVVANFKGS 241 (427)
T ss_pred cEEEEECCCCCCceEeccCCCCcccceEcCCCC----EEEEEEccCCCcEEEEEECCCCCE----------EEeecCCCC
Confidence 367777877766666777888899999999553 4554443 24599999976642 112223344
Q ss_pred eEEEEEeCCCCEEE-EeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CCCCe
Q 036314 122 VHSIAAETSGNMVC-SGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQET 199 (347)
Q Consensus 122 V~~v~~s~~~~~l~-sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~ 199 (347)
+.+.+|+|||+.|+ +.+.|+...||.++... .....+..+........| |+++.
T Consensus 242 ~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~------------------------~~~~~lt~~~~~~~~~~wSpDG~~ 297 (427)
T PRK02889 242 NSAPAWSPDGRTLAVALSRDGNSQIYTVNADG------------------------SGLRRLTQSSGIDTEPFFSPDGRS 297 (427)
T ss_pred ccceEECCCCCEEEEEEccCCCceEEEEECCC------------------------CCcEECCCCCCCCcCeEEcCCCCE
Confidence 56789999998775 67889988888653210 001122223223344556 57787
Q ss_pred EEEEec-CCcEEEEEC--CCCceeeeee-eCeeeEEEEeeCCCCcEEEEecCCC---cEEEEeCCCCCCCCCeEEecCCC
Q 036314 200 IYSASW-DHSVRTWDV--EMGKDLSDIF-CGKALNCIDIGGEGSALIAAGGSDP---ILRIWDPRKPGTSAPVFQFSSHN 272 (347)
Q Consensus 200 l~s~s~-dg~v~vwd~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~la~~~~d~---~i~iwd~~~~~~~~~~~~~~~h~ 272 (347)
|+.++. ++...+|.+ ..+. ...+. .+.......++|++. .++..+.++ .|.+||+.... ...+..+
T Consensus 298 l~f~s~~~g~~~Iy~~~~~~g~-~~~lt~~g~~~~~~~~SpDG~-~Ia~~s~~~g~~~I~v~d~~~g~----~~~lt~~- 370 (427)
T PRK02889 298 IYFTSDRGGAPQIYRMPASGGA-AQRVTFTGSYNTSPRISPDGK-LLAYISRVGGAFKLYVQDLATGQ----VTALTDT- 370 (427)
T ss_pred EEEEecCCCCcEEEEEECCCCc-eEEEecCCCCcCceEECCCCC-EEEEEEccCCcEEEEEEECCCCC----eEEccCC-
Confidence 776554 466777755 3333 22222 222233456766655 454443332 69999986432 2233222
Q ss_pred CCeeEEEeCCCCCeEEEEEeCCCc--EEEEEcCCCccceeecCCCCeEEEEeecC
Q 036314 273 SWISACKWHNKSWFHLISASYDGK--VMLWDLRTAWPLSVIDSHKDKVLCADWWR 325 (347)
Q Consensus 273 ~~v~~v~~s~~~~~~l~s~s~D~~--i~lwd~~~~~~~~~~~~h~~~v~~~~~~~ 325 (347)
.......|+|++..++.+...++. +.+.+++ +.....+..+.+.+...+|+|
T Consensus 371 ~~~~~p~~spdg~~l~~~~~~~g~~~l~~~~~~-g~~~~~l~~~~g~~~~p~wsp 424 (427)
T PRK02889 371 TRDESPSFAPNGRYILYATQQGGRSVLAAVSSD-GRIKQRLSVQGGDVREPSWGP 424 (427)
T ss_pred CCccCceECCCCCEEEEEEecCCCEEEEEEECC-CCceEEeecCCCCCCCCccCC
Confidence 334678999999865555545544 4444563 555556666777788888875
No 209
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.49 E-value=1.1e-11 Score=114.59 Aligned_cols=235 Identities=13% Similarity=0.099 Sum_probs=140.8
Q ss_pred CeEEEEcCCCeEEEEeeccCCceEEEEEeecCCCceEEEEEccC---CCcEEEEeccccccccCccccceeeeeeccccc
Q 036314 45 NLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASK---DQTLRLWKFDAEELVNHPKKIRSFKILRGHKAS 121 (347)
Q Consensus 45 ~~i~iw~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~---Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~ 121 (347)
.+|.+||..+...+.+..|...+.+.+|+|++. .|+..+. +..|.+||+.+++. ..+..+...
T Consensus 184 ~~l~i~D~~g~~~~~lt~~~~~v~~p~wSpDg~----~la~~s~~~~~~~l~~~dl~~g~~----------~~l~~~~g~ 249 (433)
T PRK04922 184 YALQVADSDGYNPQTILRSAEPILSPAWSPDGK----KLAYVSFERGRSAIYVQDLATGQR----------ELVASFRGI 249 (433)
T ss_pred EEEEEECCCCCCceEeecCCCccccccCCCCCC----EEEEEecCCCCcEEEEEECCCCCE----------EEeccCCCC
Confidence 368899987776667777888899999999553 4555543 34699999876542 122233334
Q ss_pred eEEEEEeCCCCEEE-EeeCCC--cEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CCC
Q 036314 122 VHSIAAETSGNMVC-SGSWDC--TISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQ 197 (347)
Q Consensus 122 V~~v~~s~~~~~l~-sgs~Dg--~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~ 197 (347)
..+.+|+|||+.++ +.+.++ .|.+||+.++.. ..+..+........| +++
T Consensus 250 ~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~~--------------------------~~lt~~~~~~~~~~~spDG 303 (433)
T PRK04922 250 NGAPSFSPDGRRLALTLSRDGNPEIYVMDLGSRQL--------------------------TRLTNHFGIDTEPTWAPDG 303 (433)
T ss_pred ccCceECCCCCEEEEEEeCCCCceEEEEECCCCCe--------------------------EECccCCCCccceEECCCC
Confidence 45679999998664 666666 488888765321 112222222344566 577
Q ss_pred CeEEEEec-CCc--EEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCC--cEEEEeCCCCCCCCCeEEecCCC
Q 036314 198 ETIYSASW-DHS--VRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDP--ILRIWDPRKPGTSAPVFQFSSHN 272 (347)
Q Consensus 198 ~~l~s~s~-dg~--v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~--~i~iwd~~~~~~~~~~~~~~~h~ 272 (347)
+.|+.++. ++. |.++|+.+++.......+......+++|++..++++...++ .|.+||+... . ...+. +.
T Consensus 304 ~~l~f~sd~~g~~~iy~~dl~~g~~~~lt~~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g-~---~~~Lt-~~ 378 (433)
T PRK04922 304 KSIYFTSDRGGRPQIYRVAASGGSAERLTFQGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTG-S---VRTLT-PG 378 (433)
T ss_pred CEEEEEECCCCCceEEEEECCCCCeEEeecCCCCccCEEECCCCCEEEEEECCCCceeEEEEECCCC-C---eEECC-CC
Confidence 77776654 444 55567666543221122223345678776654444433333 6899998642 2 22332 33
Q ss_pred CCeeEEEeCCCCCeEEEEEeCC--CcEEEEEcCCCccceeecCCCCeEEEEeecC
Q 036314 273 SWISACKWHNKSWFHLISASYD--GKVMLWDLRTAWPLSVIDSHKDKVLCADWWR 325 (347)
Q Consensus 273 ~~v~~v~~s~~~~~~l~s~s~D--~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~ 325 (347)
.......|+|++..++.+.... +.+.+++++. .....+..+.+.+...+|+|
T Consensus 379 ~~~~~p~~spdG~~i~~~s~~~g~~~L~~~~~~g-~~~~~l~~~~g~~~~p~wsp 432 (433)
T PRK04922 379 SLDESPSFAPNGSMVLYATREGGRGVLAAVSTDG-RVRQRLVSADGEVREPAWSP 432 (433)
T ss_pred CCCCCceECCCCCEEEEEEecCCceEEEEEECCC-CceEEcccCCCCCCCCccCC
Confidence 3455678999997644444433 3577778854 44555655666777778865
No 210
>KOG1310 consensus WD40 repeat protein [General function prediction only]
Probab=99.49 E-value=1.5e-13 Score=121.68 Aligned_cols=168 Identities=21% Similarity=0.320 Sum_probs=123.7
Q ss_pred eeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEE
Q 036314 113 KILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSV 192 (347)
Q Consensus 113 ~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 192 (347)
+.|.||++-|+++.|+.+|.+|+|||.|-.+.|||.-..+. ....-.||+.-|.++
T Consensus 44 ~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~Kl------------------------lhsI~TgHtaNIFsv 99 (758)
T KOG1310|consen 44 AELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKL------------------------LHSISTGHTANIFSV 99 (758)
T ss_pred hhhccccceecceeecCCCCEEeecCCcceEEeecchhcce------------------------eeeeecccccceeEE
Confidence 35789999999999999999999999999999998642110 011235799999999
Q ss_pred Ee-C--CCCeEEEEecCCcEEEEECCCCce----------eeeeeeC-eeeEEEEeeCCCCcEEEEecCCCcEEEEeCCC
Q 036314 193 VW-P--QQETIYSASWDHSVRTWDVEMGKD----------LSDIFCG-KALNCIDIGGEGSALIAAGGSDPILRIWDPRK 258 (347)
Q Consensus 193 ~~-~--~~~~l~s~s~dg~v~vwd~~~~~~----------~~~~~~~-~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~ 258 (347)
.| | .+..++||+.|..|+++|+...+. ...+.++ ..+.-++..+.+++.+-++++||+++-+|+|.
T Consensus 100 KFvP~tnnriv~sgAgDk~i~lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiRE 179 (758)
T KOG1310|consen 100 KFVPYTNNRIVLSGAGDKLIKLFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIRE 179 (758)
T ss_pred eeeccCCCeEEEeccCcceEEEEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccC
Confidence 88 4 456789999999999999974221 1111221 24556677777778999999999999999986
Q ss_pred CCCCCCe-------EEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCC
Q 036314 259 PGTSAPV-------FQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRT 304 (347)
Q Consensus 259 ~~~~~~~-------~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~ 304 (347)
+....+. ..+.+.--...++..+|..+++||.|+.|--.+|||.|.
T Consensus 180 ph~c~p~~~~~~~l~ny~~~lielk~ltisp~rp~~laVGgsdpfarLYD~Rr 232 (758)
T KOG1310|consen 180 PHVCNPDEDCPSILVNYNPQLIELKCLTISPSRPYYLAVGGSDPFARLYDRRR 232 (758)
T ss_pred CccCCccccccHHHHHhchhhheeeeeeecCCCCceEEecCCCchhhhhhhhh
Confidence 4322111 111111123567899999999999999999999999653
No 211
>KOG1963 consensus WD40 repeat protein [General function prediction only]
Probab=99.48 E-value=6.2e-11 Score=110.75 Aligned_cols=289 Identities=18% Similarity=0.236 Sum_probs=175.8
Q ss_pred ccCCCCCEEEEEecCCeEEEEcC-CCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccc
Q 036314 30 VDGSNPGFILTGCYDNLGRVWKA-GGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKK 108 (347)
Q Consensus 30 ~~~~~~~~l~sg~~d~~i~iw~~-~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~ 108 (347)
..|+++...+-+..+.+|.+|-. +|.|++.|.+|..++..+.+.|.... -..+.+++.||+|++||...+.++
T Consensus 22 avfSnD~k~l~~~~~~~V~VyS~~Tg~~i~~l~~~~a~l~s~~~~~~~~~-~~~~~~~sl~G~I~vwd~~~~~Ll----- 95 (792)
T KOG1963|consen 22 AVFSNDAKFLFLCTGNFVKVYSTATGECITSLEDHTAPLTSVIVLPSSEN-ANYLIVCSLDGTIRVWDWSDGELL----- 95 (792)
T ss_pred cccccCCcEEEEeeCCEEEEEecchHhhhhhcccccCccceeeecCCCcc-ceEEEEEecCccEEEecCCCcEEE-----
Confidence 34787776666677889999985 68899999999999999999875542 235779999999999998876543
Q ss_pred cceeeeeeccccceEEEEEeC----CCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccC
Q 036314 109 IRSFKILRGHKASVHSIAAET----SGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVG 184 (347)
Q Consensus 109 ~~~~~~~~~h~~~V~~v~~s~----~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (347)
+++.. ..++.++.+.| ....+..+..|.. +........... . ...............+..
T Consensus 96 ----kt~~~-~~~v~~~~~~~~~a~~s~~~~~s~~~~~--~~~~~s~~~~~q-~--------~~~~~~t~~~~~~d~~~~ 159 (792)
T KOG1963|consen 96 ----KTFDN-NLPVHALVYKPAQADISANVYVSVEDYS--ILTTFSKKLSKQ-S--------SRFVLATFDSAKGDFLKE 159 (792)
T ss_pred ----EEEec-CCceeEEEechhHhCccceeEeecccce--eeeecccccccc-e--------eeeEeeeccccchhhhhh
Confidence 33332 22333333321 1111111222211 111100000000 0 000000001111112222
Q ss_pred CccceEEEEeCCCCeEEEEecCCcEEEEECCCCceee---e--eeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCC-
Q 036314 185 HTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLS---D--IFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRK- 258 (347)
Q Consensus 185 h~~~v~~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~- 258 (347)
|.. -.++.+.+...+...-.+..+.+|+........ . ..+....+|.+++|. ++.+|++..||+|.+|.-..
T Consensus 160 ~~~-~~~I~~~~~ge~~~i~~~~~~~~~~v~~~~~~~~~~~~~~~Htf~~t~~~~spn-~~~~Aa~d~dGrI~vw~d~~~ 237 (792)
T KOG1963|consen 160 HQE-PKSIVDNNSGEFKGIVHMCKIHIYFVPKHTKHTSSRDITVHHTFNITCVALSPN-ERYLAAGDSDGRILVWRDFGS 237 (792)
T ss_pred hcC-CccEEEcCCceEEEEEEeeeEEEEEecccceeeccchhhhhhcccceeEEeccc-cceEEEeccCCcEEEEecccc
Confidence 322 133444454555555667788999887643111 0 111224688999765 56889999999999996332
Q ss_pred CCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeecC-CCEEEEccCCce
Q 036314 259 PGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGVDSK 337 (347)
Q Consensus 259 ~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~D~~ 337 (347)
.........+.-|.+.|.+++|+++|.+ |.||+..+.+-+|.+.+++ .+-+-.=.+.|+.+.++| +...+..-.|..
T Consensus 238 ~~~~~t~t~lHWH~~~V~~L~fS~~G~~-LlSGG~E~VLv~Wq~~T~~-kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNq 315 (792)
T KOG1963|consen 238 SDDSETCTLLHWHHDEVNSLSFSSDGAY-LLSGGREGVLVLWQLETGK-KQFLPRLGSPILHIVVSPDSDLYSLVLEDNQ 315 (792)
T ss_pred ccccccceEEEecccccceeEEecCCce-EeecccceEEEEEeecCCC-cccccccCCeeEEEEEcCCCCeEEEEecCce
Confidence 1222234566779999999999999975 9999999999999999886 222223356889999985 556666667888
Q ss_pred EEEeecc
Q 036314 338 LCVSSGV 344 (347)
Q Consensus 338 v~vw~~~ 344 (347)
|.+=.++
T Consensus 316 I~li~~~ 322 (792)
T KOG1963|consen 316 IHLIKAS 322 (792)
T ss_pred EEEEecc
Confidence 8876664
No 212
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.47 E-value=7.5e-11 Score=109.25 Aligned_cols=232 Identities=10% Similarity=0.056 Sum_probs=140.2
Q ss_pred eEEEEcCCCeEEEEeeccCCceEEEEEeecCCCceEEEEEcc---CCCcEEEEeccccccccCccccceeeeeeccccce
Q 036314 46 LGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATAS---KDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASV 122 (347)
Q Consensus 46 ~i~iw~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s---~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V 122 (347)
.|.+||..|...+.+..|...+.+.+|+|++. .|+..+ .+..|.+||+.+++. ..+..+...+
T Consensus 183 ~l~~~d~dg~~~~~lt~~~~~v~~p~wSpDG~----~lay~s~~~g~~~i~~~dl~~g~~----------~~l~~~~g~~ 248 (435)
T PRK05137 183 RLAIMDQDGANVRYLTDGSSLVLTPRFSPNRQ----EITYMSYANGRPRVYLLDLETGQR----------ELVGNFPGMT 248 (435)
T ss_pred EEEEECCCCCCcEEEecCCCCeEeeEECCCCC----EEEEEEecCCCCEEEEEECCCCcE----------EEeecCCCcc
Confidence 68888887777777888888999999999553 455443 346899999976542 2344556667
Q ss_pred EEEEEeCCCCEE-EEeeCCCc--EEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CCCC
Q 036314 123 HSIAAETSGNMV-CSGSWDCT--ISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQE 198 (347)
Q Consensus 123 ~~v~~s~~~~~l-~sgs~Dg~--I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~ 198 (347)
.+.+|+|||+.| ++.+.++. |.+||+.++. ...+..+........| |+++
T Consensus 249 ~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~--------------------------~~~Lt~~~~~~~~~~~spDG~ 302 (435)
T PRK05137 249 FAPRFSPDGRKVVMSLSQGGNTDIYTMDLRSGT--------------------------TTRLTDSPAIDTSPSYSPDGS 302 (435)
T ss_pred cCcEECCCCCEEEEEEecCCCceEEEEECCCCc--------------------------eEEccCCCCccCceeEcCCCC
Confidence 788999999866 46677776 5555665431 1122223333444566 5777
Q ss_pred eEEEEec-CC--cEEEEECCCCceeeeeee-CeeeEEEEeeCCCCcEEEEecCC--CcEEEEeCCCCCCCCCeEEecCCC
Q 036314 199 TIYSASW-DH--SVRTWDVEMGKDLSDIFC-GKALNCIDIGGEGSALIAAGGSD--PILRIWDPRKPGTSAPVFQFSSHN 272 (347)
Q Consensus 199 ~l~s~s~-dg--~v~vwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~la~~~~d--~~i~iwd~~~~~~~~~~~~~~~h~ 272 (347)
.|+..+. ++ .|.++|+..+.. ..+.. ........++|++..++.+.... ..|.+||+... . ...+. ..
T Consensus 303 ~i~f~s~~~g~~~Iy~~d~~g~~~-~~lt~~~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~-~---~~~lt-~~ 376 (435)
T PRK05137 303 QIVFESDRSGSPQLYVMNADGSNP-RRISFGGGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGS-G---ERILT-SG 376 (435)
T ss_pred EEEEEECCCCCCeEEEEECCCCCe-EEeecCCCcccCeEECCCCCEEEEEEcCCCceEEEEEECCCC-c---eEecc-CC
Confidence 7776653 33 577778766543 33332 22344567777665544443222 46788887532 1 22222 22
Q ss_pred CCeeEEEeCCCCCeEEEEEeCC-----CcEEEEEcCCCccceeecCCCCeEEEEeecC
Q 036314 273 SWISACKWHNKSWFHLISASYD-----GKVMLWDLRTAWPLSVIDSHKDKVLCADWWR 325 (347)
Q Consensus 273 ~~v~~v~~s~~~~~~l~s~s~D-----~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~ 325 (347)
..+....|+||+..++.++... ..+.+.|++.+. ...+. ..+.+...+|+|
T Consensus 377 ~~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl~g~~-~~~l~-~~~~~~~p~Wsp 432 (435)
T PRK05137 377 FLVEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDLTGRN-EREVP-TPGDASDPAWSP 432 (435)
T ss_pred CCCCCCeECCCCCEEEEEEccCCCCCcceEEEEECCCCc-eEEcc-CCCCccCcccCC
Confidence 2466789999997644444433 257777886544 34443 244566667764
No 213
>KOG1272 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.43 E-value=4.9e-13 Score=116.32 Aligned_cols=228 Identities=14% Similarity=0.209 Sum_probs=159.7
Q ss_pred EEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEe
Q 036314 68 SSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWR 147 (347)
Q Consensus 68 ~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd 147 (347)
..+.+.. ++.+|+.|+.-|.|..+|..+..+.. .+. -...|.++.|-++.+++|. ....-+.|||
T Consensus 133 Y~~~ytr----nGrhlllgGrKGHlAa~Dw~t~~L~~---------Ei~-v~Etv~Dv~~LHneq~~AV-AQK~y~yvYD 197 (545)
T KOG1272|consen 133 YHLDYTR----NGRHLLLGGRKGHLAAFDWVTKKLHF---------EIN-VMETVRDVTFLHNEQFFAV-AQKKYVYVYD 197 (545)
T ss_pred eeeeecC----CccEEEecCCccceeeeecccceeee---------eee-hhhhhhhhhhhcchHHHHh-hhhceEEEec
Confidence 4556655 34578889999999999988765432 111 1345788888877776664 5566788997
Q ss_pred cCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeeeeC
Q 036314 148 TNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCG 226 (347)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~ 226 (347)
-.. +.+-.++.| ..|..+.| |..=.|++++..|.++.-|+.+|+.+..+..+
T Consensus 198 ~~G--------------------------tElHClk~~-~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~ 250 (545)
T KOG1272|consen 198 NNG--------------------------TELHCLKRH-IRVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTG 250 (545)
T ss_pred CCC--------------------------cEEeehhhc-CchhhhcccchhheeeecccCCceEEEeechhhhhHHHHcc
Confidence 542 222233333 23555665 44445788899999999999999988777654
Q ss_pred e-eeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCC
Q 036314 227 K-ALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTA 305 (347)
Q Consensus 227 ~-~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~ 305 (347)
. .+..+.-.|- ..++-.|...|+|.+|.+... .|+..+-.|.+.|.++++.++|. ++||++.|..++|||+|..
T Consensus 251 ~G~~~vm~qNP~-NaVih~GhsnGtVSlWSP~sk---ePLvKiLcH~g~V~siAv~~~G~-YMaTtG~Dr~~kIWDlR~~ 325 (545)
T KOG1272|consen 251 AGRTDVMKQNPY-NAVIHLGHSNGTVSLWSPNSK---EPLVKILCHRGPVSSIAVDRGGR-YMATTGLDRKVKIWDLRNF 325 (545)
T ss_pred CCccchhhcCCc-cceEEEcCCCceEEecCCCCc---chHHHHHhcCCCcceEEECCCCc-EEeecccccceeEeeeccc
Confidence 3 3333444343 347778999999999988753 34566678999999999999986 5999999999999999987
Q ss_pred ccceeecCCCCeEEEEeecCCCEEEEccCCceEEEeecc
Q 036314 306 WPLSVIDSHKDKVLCADWWRGDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 306 ~~~~~~~~h~~~v~~~~~~~~~~l~s~s~D~~v~vw~~~ 344 (347)
..+.++.. .-....+++|.... .++|....|.||.+-
T Consensus 326 ~ql~t~~t-p~~a~~ls~Sqkgl-LA~~~G~~v~iw~d~ 362 (545)
T KOG1272|consen 326 YQLHTYRT-PHPASNLSLSQKGL-LALSYGDHVQIWKDA 362 (545)
T ss_pred cccceeec-CCCccccccccccc-eeeecCCeeeeehhh
Confidence 76666543 22455677775434 445777889999763
No 214
>KOG1523 consensus Actin-related protein Arp2/3 complex, subunit ARPC1/p41-ARC [Cytoskeleton]
Probab=99.42 E-value=2.3e-11 Score=101.47 Aligned_cols=201 Identities=17% Similarity=0.226 Sum_probs=149.7
Q ss_pred cccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CC
Q 036314 118 HKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQ 196 (347)
Q Consensus 118 h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~ 196 (347)
-..+|+|.+|++|+..+|.+-....|.||....... -+...++..|...|+++.| +.
T Consensus 9 ~~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~----------------------w~~~htls~Hd~~vtgvdWap~ 66 (361)
T KOG1523|consen 9 LLEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADL----------------------WEPAHTLSEHDKIVTGVDWAPK 66 (361)
T ss_pred ccCceeeeeecCCCceEEeccCCceEEEEEecCCCC----------------------ceeceehhhhCcceeEEeecCC
Confidence 357899999999999999999999999998654321 1234577889999999999 56
Q ss_pred CCeEEEEecCCcEEEEECCC-Cceeee---eeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCC-CCeEEecCC
Q 036314 197 QETIYSASWDHSVRTWDVEM-GKDLSD---IFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTS-APVFQFSSH 271 (347)
Q Consensus 197 ~~~l~s~s~dg~v~vwd~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~-~~~~~~~~h 271 (347)
.+.|.+++.|+.-.+|.... +....+ +.......|+.++|. ++.||+|+....|.+|=.+..+.. .....-..+
T Consensus 67 snrIvtcs~drnayVw~~~~~~~WkptlvLlRiNrAAt~V~WsP~-enkFAVgSgar~isVcy~E~ENdWWVsKhikkPi 145 (361)
T KOG1523|consen 67 SNRIVTCSHDRNAYVWTQPSGGTWKPTLVLLRINRAATCVKWSPK-ENKFAVGSGARLISVCYYEQENDWWVSKHIKKPI 145 (361)
T ss_pred CCceeEccCCCCccccccCCCCeeccceeEEEeccceeeEeecCc-CceEEeccCccEEEEEEEecccceehhhhhCCcc
Confidence 77999999999999999844 332222 234567889999765 568899999999999876653321 011122357
Q ss_pred CCCeeEEEeCCCCCeEEEEEeCCCcEEEEEc-----CC-------------CccceeecCCCCeEEEEeecC-CCEEEEc
Q 036314 272 NSWISACKWHNKSWFHLISASYDGKVMLWDL-----RT-------------AWPLSVIDSHKDKVLCADWWR-GDSVISG 332 (347)
Q Consensus 272 ~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~-----~~-------------~~~~~~~~~h~~~v~~~~~~~-~~~l~s~ 332 (347)
.+.|.+++|+|++- +|++||.|+.+||+.. +. |+.+..+....+-|..+.|++ |++||=.
T Consensus 146 rStv~sldWhpnnV-LlaaGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv 224 (361)
T KOG1523|consen 146 RSTVTSLDWHPNNV-LLAAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAWV 224 (361)
T ss_pred ccceeeeeccCCcc-eecccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeEe
Confidence 78899999999984 6999999999999953 21 011222334457789999985 8899999
Q ss_pred cCCceEEEee
Q 036314 333 GVDSKLCVSS 342 (347)
Q Consensus 333 s~D~~v~vw~ 342 (347)
+.|++|.+-+
T Consensus 225 ~Hds~v~~~d 234 (361)
T KOG1523|consen 225 GHDSTVSFVD 234 (361)
T ss_pred cCCCceEEee
Confidence 9999998765
No 215
>KOG1272 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.42 E-value=1.3e-12 Score=113.73 Aligned_cols=215 Identities=18% Similarity=0.257 Sum_probs=154.1
Q ss_pred eeeccCC-CCCEEEEEecCCeEEEEcCCCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccC
Q 036314 27 VSAVDGS-NPGFILTGCYDNLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNH 105 (347)
Q Consensus 27 v~~~~~~-~~~~l~sg~~d~~i~iw~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~ 105 (347)
|..+.|- +.+++|.+ ...-+.|||..|..++.+..|.. |..+.|.|.- ..|+++++.|.++.-|+..++++..
T Consensus 173 v~Dv~~LHneq~~AVA-QK~y~yvYD~~GtElHClk~~~~-v~rLeFLPyH----fLL~~~~~~G~L~Y~DVS~GklVa~ 246 (545)
T KOG1272|consen 173 VRDVTFLHNEQFFAVA-QKKYVYVYDNNGTELHCLKRHIR-VARLEFLPYH----FLLVAASEAGFLKYQDVSTGKLVAS 246 (545)
T ss_pred hhhhhhhcchHHHHhh-hhceEEEecCCCcEEeehhhcCc-hhhhcccchh----heeeecccCCceEEEeechhhhhHH
Confidence 4555554 44555555 56778999988988888888854 8999998843 4689999999999999999876532
Q ss_pred ccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCC
Q 036314 106 PKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGH 185 (347)
Q Consensus 106 ~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h 185 (347)
+..-.+.+..+..+|-+..+-.|...|+|.+|..... +++-.+..|
T Consensus 247 ---------~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~sk-------------------------ePLvKiLcH 292 (545)
T KOG1272|consen 247 ---------IRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSPNSK-------------------------EPLVKILCH 292 (545)
T ss_pred ---------HHccCCccchhhcCCccceEEEcCCCceEEecCCCCc-------------------------chHHHHHhc
Confidence 3334566777888898889999999999999975432 234456679
Q ss_pred ccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCC
Q 036314 186 TQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAP 264 (347)
Q Consensus 186 ~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~ 264 (347)
.++|.++++ +.|.++++++.|+.++|||++.-..+.+.....+...++++. ..++| .+....|.||.=.....+..
T Consensus 293 ~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~tp~~a~~ls~Sq--kglLA-~~~G~~v~iw~d~~~~s~~~ 369 (545)
T KOG1272|consen 293 RGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRTPHPASNLSLSQ--KGLLA-LSYGDHVQIWKDALKGSGHG 369 (545)
T ss_pred CCCcceEEECCCCcEEeecccccceeEeeeccccccceeecCCCcccccccc--cccee-eecCCeeeeehhhhcCCCCC
Confidence 999999998 578899999999999999999887777766656667777743 23444 45667899994221111011
Q ss_pred eEEecCC--CCCeeEEEeCCCC
Q 036314 265 VFQFSSH--NSWISACKWHNKS 284 (347)
Q Consensus 265 ~~~~~~h--~~~v~~v~~s~~~ 284 (347)
...+..| ...|..+.|.|-.
T Consensus 370 ~~pYm~H~~~~~V~~l~FcP~E 391 (545)
T KOG1272|consen 370 ETPYMNHRCGGPVEDLRFCPYE 391 (545)
T ss_pred CcchhhhccCcccccceeccHH
Confidence 1111122 2367888888754
No 216
>KOG1354 consensus Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=99.42 E-value=4.3e-11 Score=100.78 Aligned_cols=276 Identities=20% Similarity=0.289 Sum_probs=166.6
Q ss_pred CcCCceeeccCC-CCCEEEEEecCCeEEEEcCC----Ce--EEEEeeccCC------------ceEEEEEeecCCCceEE
Q 036314 22 LHDDWVSAVDGS-NPGFILTGCYDNLGRVWKAG----GV--CTHILEGHCG------------AVSSVNIIKSDGLKYVT 82 (347)
Q Consensus 22 ~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~----~~--~~~~l~~h~~------------~V~~v~~~~~~~~~~~~ 82 (347)
...+-|.++.|. .|.+||||..+|.|-++... +. ....++.|+. +|+.+.|.++++. ..
T Consensus 23 teadiis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~--a~ 100 (433)
T KOG1354|consen 23 TEADIISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNL--AE 100 (433)
T ss_pred chhcceeeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCc--cE
Confidence 345788999987 67899999999999999642 21 2344666653 5788899886653 34
Q ss_pred EEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeee
Q 036314 83 VATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKK 162 (347)
Q Consensus 83 l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~ 162 (347)
++...+|.+|++|.+........ . .. ..-.+....+.++.. .+-+..|-.+
T Consensus 101 FLlstNdktiKlWKi~er~~k~~-~-~~--~~~~~~~~~~~~lr~------p~~~~~~~~v------------------- 151 (433)
T KOG1354|consen 101 FLLSTNDKTIKLWKIRERGSKKE-G-YN--LPEEGPPGTITSLRL------PVEGRHDLEV------------------- 151 (433)
T ss_pred EEEecCCcceeeeeeeccccccc-c-cc--ccccCCCCccceeec------eeecccccee-------------------
Confidence 55678999999999864321100 0 00 000001111222111 0001111000
Q ss_pred ccCCCccccccccccccccc-cCCccceEEEEeC-CCCeEEEEecCCcEEEEECCCCceeeee---eeC------eeeEE
Q 036314 163 RKGNNQVEEPQLEGEAISTL-VGHTQCVSSVVWP-QQETIYSASWDHSVRTWDVEMGKDLSDI---FCG------KALNC 231 (347)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~-~~~~l~s~s~dg~v~vwd~~~~~~~~~~---~~~------~~~~~ 231 (347)
+..+.+.+ -.|+--|+++.+. +++.++| +.|=.|.+|+++-...-..+ ... ..++.
T Consensus 152 ------------ea~prRv~aNaHtyhiNSIS~NsD~Et~lS-ADdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITs 218 (433)
T KOG1354|consen 152 ------------EASPRRVYANAHTYHINSISVNSDKETFLS-ADDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITS 218 (433)
T ss_pred ------------eeeeeeeccccceeEeeeeeecCccceEee-ccceeeeeccccccCCceeEEEccccCHHHHHHHHhh
Confidence 11112222 3477778999884 5566665 46778999998643322222 111 23456
Q ss_pred EEeeCCCCcEEEEecCCCcEEEEeCCCCC-------------CCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEE
Q 036314 232 IDIGGEGSALIAAGGSDPILRIWDPRKPG-------------TSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVM 298 (347)
Q Consensus 232 ~~~~~~~~~~la~~~~d~~i~iwd~~~~~-------------~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~ 298 (347)
..|+|...++++-.+..|+|++-|+|... .+....-++.-...|.++.|++.|++ +++-.. -+|+
T Consensus 219 aEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEepedp~~rsffseiIsSISDvKFs~sGry-ilsRDy-ltvk 296 (433)
T KOG1354|consen 219 AEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRY-ILSRDY-LTVK 296 (433)
T ss_pred hccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhhccccCCcchhhHHHHhhhhhceEEccCCcE-EEEecc-ceeE
Confidence 67888888888888889999999998421 11111112233345888999999865 665543 5899
Q ss_pred EEEcC-CCccceeecCCC------------CeE---EEEeec-CCCEEEEccCCceEEEeec
Q 036314 299 LWDLR-TAWPLSVIDSHK------------DKV---LCADWW-RGDSVISGGVDSKLCVSSG 343 (347)
Q Consensus 299 lwd~~-~~~~~~~~~~h~------------~~v---~~~~~~-~~~~l~s~s~D~~v~vw~~ 343 (347)
|||+. ..+++.+++-|. +.| ..+.|+ ++.+++|||.....+++.+
T Consensus 297 ~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~sg~~~~v~TGsy~n~frvf~~ 358 (433)
T KOG1354|consen 297 LWDLNMEAKPVETYPVHEYLRSKLCSLYENDAIFDKFECSWSGNDSYVMTGSYNNVFRVFNL 358 (433)
T ss_pred EEeccccCCcceEEeehHhHHHHHHHHhhccchhheeEEEEcCCcceEecccccceEEEecC
Confidence 99994 456666655443 334 356776 5668999999999999873
No 217
>KOG1409 consensus Uncharacterized conserved protein, contains WD40 repeats and FYVE domains [Function unknown]
Probab=99.41 E-value=3.5e-11 Score=101.27 Aligned_cols=227 Identities=19% Similarity=0.254 Sum_probs=142.0
Q ss_pred CCCcCCceeeccC-CCCCEEEEEecCCeEEEEcC-C-CeE-EEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEE
Q 036314 20 PSLHDDWVSAVDG-SNPGFILTGCYDNLGRVWKA-G-GVC-THILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLW 95 (347)
Q Consensus 20 ~~~h~~~v~~~~~-~~~~~l~sg~~d~~i~iw~~-~-~~~-~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~w 95 (347)
..||-+.|++.-. +...-+.+.+.|.++|+|-- . ++. .-+...-..+++++.+.+ ....|+.|-..|++.-+
T Consensus 20 ~eG~~d~vn~~~l~~~e~gv~~~s~drtvrv~lkrds~q~wpsI~~~mP~~~~~~~y~~----e~~~L~vg~~ngtvtef 95 (404)
T KOG1409|consen 20 IEGSQDDVNAAILIPKEEGVISVSEDRTVRVWLKRDSGQYWPSIYHYMPSPCSAMEYVS----ESRRLYVGQDNGTVTEF 95 (404)
T ss_pred hcCchhhhhhheeccCCCCeEEccccceeeeEEeccccccCchhhhhCCCCceEeeeec----cceEEEEEEecceEEEE
Confidence 4588888887764 33446899999999999952 2 221 112222345677787776 34578889999999888
Q ss_pred eccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCC-CCCCCccceeeeccC-C-------
Q 036314 96 KFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTND-SDAAGNQVSIKKRKG-N------- 166 (347)
Q Consensus 96 d~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~-~~~~~~~~~~~~~~~-~------- 166 (347)
.+.. ..++....+....|..+|..+.|+-.-.++++.+.|..+. |-... +.-.+.+........ .
T Consensus 96 s~se-----dfnkm~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~-~hc~e~~~~lg~Y~~~~~~t~~~~d~~~~f 169 (404)
T KOG1409|consen 96 ALSE-----DFNKMTFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQFA-WHCTESGNRLGGYNFETPASALQFDALYAF 169 (404)
T ss_pred Ehhh-----hhhhcchhhhhhhhhcceeeEEecCCceeEEEeccccceE-EEeeccCCcccceEeeccCCCCceeeEEEE
Confidence 7642 2333344455668999999999998899999999998775 54332 211111111000000 0
Q ss_pred -----Ccc---ccccccccccccccCCccceEEEEeC-CCCeEEEEecCCcEEEEECCCCceee-eee-eCeeeEEEEee
Q 036314 167 -----NQV---EEPQLEGEAISTLVGHTQCVSSVVWP-QQETIYSASWDHSVRTWDVEMGKDLS-DIF-CGKALNCIDIG 235 (347)
Q Consensus 167 -----~~~---~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~l~s~s~dg~v~vwd~~~~~~~~-~~~-~~~~~~~~~~~ 235 (347)
... ...+-.-..+.++.+|.+++.++.|. .+..|+|+..|..+.+||+-...-+. .++ +.+.+..+...
T Consensus 170 vGd~~gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~ 249 (404)
T KOG1409|consen 170 VGDHSGQITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALSYA 249 (404)
T ss_pred ecccccceEEEEEeecCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccchhhhhhhhhh
Confidence 000 00001123456788999999999994 55678999999999999985433222 222 23333333322
Q ss_pred CCCCcEEEEecCCCcEEEEeCC
Q 036314 236 GEGSALIAAGGSDPILRIWDPR 257 (347)
Q Consensus 236 ~~~~~~la~~~~d~~i~iwd~~ 257 (347)
+- ...+.+++.||.|.+||+.
T Consensus 250 ~~-t~~l~S~~edg~i~~w~mn 270 (404)
T KOG1409|consen 250 QH-TRQLISCGEDGGIVVWNMN 270 (404)
T ss_pred hh-heeeeeccCCCeEEEEecc
Confidence 22 2356778899999999975
No 218
>KOG2110 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.38 E-value=5.5e-10 Score=95.01 Aligned_cols=221 Identities=13% Similarity=0.139 Sum_probs=139.2
Q ss_pred ceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCc--EEEEecCCCCCCCc
Q 036314 79 KYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCT--ISLWRTNDSDAAGN 156 (347)
Q Consensus 79 ~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~--I~iwd~~~~~~~~~ 156 (347)
+...|..|+.|| -++|..+..+. +.. ...-.-.|..+-|+.+ ++|-.+.+.. +++.+.....
T Consensus 16 d~~~lsvGs~~G-yk~~~~~~~~k--------~~~-~~~~~~~IvEmLFSSS--LvaiV~~~qpr~Lkv~~~Kk~~---- 79 (391)
T KOG2110|consen 16 DSTLLSVGSKDG-YKIFSCSPFEK--------CFS-KDTEGVSIVEMLFSSS--LVAIVSIKQPRKLKVVHFKKKT---- 79 (391)
T ss_pred ceeEEEccCCCc-eeEEecCchHH--------hhc-ccCCCeEEEEeecccc--eeEEEecCCCceEEEEEcccCc----
Confidence 445688888888 57887654321 110 0111223444556643 4443443433 6666654321
Q ss_pred cceeeeccCCCccccccccccccccccCCccceEEEEeCCCCeEEEEecCCcEEEEECCCCceeeeeeeC--eeeEEEEe
Q 036314 157 QVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCG--KALNCIDI 234 (347)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~--~~~~~~~~ 234 (347)
.+..+. ....|.++.+.. ++|+.+=.+ .|.|||+++-+.++++... ++....++
T Consensus 80 ---------------------~ICe~~-fpt~IL~VrmNr-~RLvV~Lee-~IyIydI~~MklLhTI~t~~~n~~gl~Al 135 (391)
T KOG2110|consen 80 ---------------------TICEIF-FPTSILAVRMNR-KRLVVCLEE-SIYIYDIKDMKLLHTIETTPPNPKGLCAL 135 (391)
T ss_pred ---------------------eEEEEe-cCCceEEEEEcc-ceEEEEEcc-cEEEEecccceeehhhhccCCCccceEee
Confidence 111111 123455555544 444444444 4999999998888777543 33223344
Q ss_pred eCCCC-cEEEE-e-cCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCc-EEEEEcCCCcccee
Q 036314 235 GGEGS-ALIAA-G-GSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGK-VMLWDLRTAWPLSV 310 (347)
Q Consensus 235 ~~~~~-~~la~-~-~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~-i~lwd~~~~~~~~~ 310 (347)
+++.. .++|- + ...|.|.+||... ..+...+..|.+.+.+++|+++|. +|||||+.|+ |||+.+..|+.+..
T Consensus 136 S~n~~n~ylAyp~s~t~GdV~l~d~~n---l~~v~~I~aH~~~lAalafs~~G~-llATASeKGTVIRVf~v~~G~kl~e 211 (391)
T KOG2110|consen 136 SPNNANCYLAYPGSTTSGDVVLFDTIN---LQPVNTINAHKGPLAALAFSPDGT-LLATASEKGTVIRVFSVPEGQKLYE 211 (391)
T ss_pred ccCCCCceEEecCCCCCceEEEEEccc---ceeeeEEEecCCceeEEEECCCCC-EEEEeccCceEEEEEEcCCccEeee
Confidence 33322 23332 2 2358999999864 445778889999999999999995 7999998885 89999999998888
Q ss_pred ecCCC--CeEEEEeecC-CCEEEEccCCceEEEeec
Q 036314 311 IDSHK--DKVLCADWWR-GDSVISGGVDSKLCVSSG 343 (347)
Q Consensus 311 ~~~h~--~~v~~~~~~~-~~~l~s~s~D~~v~vw~~ 343 (347)
|..-. ..|.+++|++ +++|++.|.-+||.|+..
T Consensus 212 FRRG~~~~~IySL~Fs~ds~~L~~sS~TeTVHiFKL 247 (391)
T KOG2110|consen 212 FRRGTYPVSIYSLSFSPDSQFLAASSNTETVHIFKL 247 (391)
T ss_pred eeCCceeeEEEEEEECCCCCeEEEecCCCeEEEEEe
Confidence 86433 3567999985 667888889999999754
No 219
>KOG2111 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.36 E-value=3.9e-10 Score=94.15 Aligned_cols=153 Identities=15% Similarity=0.142 Sum_probs=107.4
Q ss_pred ccceEEEEeCCCCeEEEEecCCcEEEEECC-CCceeeeeee---CeeeEEEEeeCCCCcEEE-EecCCCcEEEEeCCCCC
Q 036314 186 TQCVSSVVWPQQETIYSASWDHSVRTWDVE-MGKDLSDIFC---GKALNCIDIGGEGSALIA-AGGSDPILRIWDPRKPG 260 (347)
Q Consensus 186 ~~~v~~~~~~~~~~l~s~s~dg~v~vwd~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~la-~~~~d~~i~iwd~~~~~ 260 (347)
..+|.++.+..+ .|+. -..+.|.||... ..+.++.+.. ++...++.-... ..+|| -|-.-|.|.|-|+....
T Consensus 94 ~~~I~~V~l~r~-riVv-vl~~~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~~~-k~~LafPg~k~GqvQi~dL~~~~ 170 (346)
T KOG2111|consen 94 NSEIKAVKLRRD-RIVV-VLENKIYVYTFPDNPKLLHVIETRSNPKGLCSLCPTSN-KSLLAFPGFKTGQVQIVDLASTK 170 (346)
T ss_pred ccceeeEEEcCC-eEEE-EecCeEEEEEcCCChhheeeeecccCCCceEeecCCCC-ceEEEcCCCccceEEEEEhhhcC
Confidence 346777776443 3333 357789999987 3455554432 223333332222 22333 34556899999997643
Q ss_pred CCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCc-EEEEEcCCCccceeecC--CCCeEEEEeecC-CCEEEEccCCc
Q 036314 261 TSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGK-VMLWDLRTAWPLSVIDS--HKDKVLCADWWR-GDSVISGGVDS 336 (347)
Q Consensus 261 ~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~-i~lwd~~~~~~~~~~~~--h~~~v~~~~~~~-~~~l~s~s~D~ 336 (347)
. .+...+..|.+.|.+++.+-+| .++||+|..|+ |||||..+|+.++.+.. -...|+|++||| ..+||.+|.-|
T Consensus 171 ~-~~p~~I~AH~s~Iacv~Ln~~G-t~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~s~LavsSdKg 248 (346)
T KOG2111|consen 171 P-NAPSIINAHDSDIACVALNLQG-TLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFSPNSSWLAVSSDKG 248 (346)
T ss_pred c-CCceEEEcccCceeEEEEcCCc-cEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeCCCccEEEEEcCCC
Confidence 2 1345778999999999999998 47999998886 89999999999888753 246799999986 66899999999
Q ss_pred eEEEeec
Q 036314 337 KLCVSSG 343 (347)
Q Consensus 337 ~v~vw~~ 343 (347)
||.|.+.
T Consensus 249 TlHiF~l 255 (346)
T KOG2111|consen 249 TLHIFSL 255 (346)
T ss_pred eEEEEEe
Confidence 9999864
No 220
>KOG3881 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.36 E-value=2.5e-10 Score=97.66 Aligned_cols=249 Identities=14% Similarity=0.131 Sum_probs=165.5
Q ss_pred CCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcE
Q 036314 64 CGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTI 143 (347)
Q Consensus 64 ~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I 143 (347)
...|.++.|.-++ ....+...+.|-.+..+.+....+.... -...+......+|..++.. ...|++|-.+|.+
T Consensus 55 ~~ris~l~~~~d~--~tevl~~r~~~~~~~~~~~~E~~~~s~~---~~~~~~~l~~~~I~gl~~~--dg~Litc~~sG~l 127 (412)
T KOG3881|consen 55 LDRISSLLFGVDG--ETEVLNARSADDDLPKFVIEEFEISSSL---DDAKTVSLGTKSIKGLKLA--DGTLITCVSSGNL 127 (412)
T ss_pred hhhhhhheeecCC--ceeEeeccccCcccccccccCCcccccc---ccccccccccccccchhhc--CCEEEEEecCCcE
Confidence 3456677776432 2234555557777887777655443221 0112333456677666543 3467788999999
Q ss_pred EEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEE-eCCCC-eEEEEecC--CcEEEEECCCCce
Q 036314 144 SLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVV-WPQQE-TIYSASWD--HSVRTWDVEMGKD 219 (347)
Q Consensus 144 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~-~~~~~-~l~s~s~d--g~v~vwd~~~~~~ 219 (347)
.+|....+....+.. ..+..+ ..+..+. .+... .+++|+.. ..+++||++..+.
T Consensus 128 ~~~~~k~~d~hss~l---------------------~~la~g-~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~q 185 (412)
T KOG3881|consen 128 QVRHDKSGDLHSSKL---------------------IKLATG-PGLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQ 185 (412)
T ss_pred EEEeccCCccccccc---------------------eeeecC-CceeeeccCCCCCceEecCchhcccceeeeeccccee
Confidence 999887654322111 111111 1122221 12233 46778888 7899999998754
Q ss_pred eeeeee--------Ceee--EEEEeeCC-CCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEE
Q 036314 220 LSDIFC--------GKAL--NCIDIGGE-GSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHL 288 (347)
Q Consensus 220 ~~~~~~--------~~~~--~~~~~~~~-~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l 288 (347)
+-.-.. .-++ +.+.|-++ ..+.||+++.-+.+++||++.+. +|+..+.--...++++...|++. ++
T Consensus 186 iw~aKNvpnD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qR--RPV~~fd~~E~~is~~~l~p~gn-~I 262 (412)
T KOG3881|consen 186 IWSAKNVPNDRLGLRVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQR--RPVAQFDFLENPISSTGLTPSGN-FI 262 (412)
T ss_pred eeeccCCCCccccceeeeeeccceecCCCCCceEEEEecceeEEEecCcccC--cceeEeccccCcceeeeecCCCc-EE
Confidence 422111 0133 23444332 25678999999999999998644 45667766778899999999985 69
Q ss_pred EEEeCCCcEEEEEcCCCcccee-ecCCCCeEEEEeecCC-CEEEEccCCceEEEeecc
Q 036314 289 ISASYDGKVMLWDLRTAWPLSV-IDSHKDKVLCADWWRG-DSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 289 ~s~s~D~~i~lwd~~~~~~~~~-~~~h~~~v~~~~~~~~-~~l~s~s~D~~v~vw~~~ 344 (347)
.+|..-+.+..+|+++++.+.. +.+-++.++++-.+|+ ..+|++|.|+-|||.+.-
T Consensus 263 y~gn~~g~l~~FD~r~~kl~g~~~kg~tGsirsih~hp~~~~las~GLDRyvRIhD~k 320 (412)
T KOG3881|consen 263 YTGNTKGQLAKFDLRGGKLLGCGLKGITGSIRSIHCHPTHPVLASCGLDRYVRIHDIK 320 (412)
T ss_pred EEecccchhheecccCceeeccccCCccCCcceEEEcCCCceEEeeccceeEEEeecc
Confidence 9999999999999999887766 7888999999999875 689999999999999864
No 221
>KOG2139 consensus WD40 repeat protein [General function prediction only]
Probab=99.35 E-value=1e-09 Score=93.24 Aligned_cols=235 Identities=14% Similarity=0.231 Sum_probs=141.5
Q ss_pred EEEEEecCCeEEEEcCCCeEEEEee-ccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCc---ccccee
Q 036314 37 FILTGCYDNLGRVWKAGGVCTHILE-GHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHP---KKIRSF 112 (347)
Q Consensus 37 ~l~sg~~d~~i~iw~~~~~~~~~l~-~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~---~~~~~~ 112 (347)
-+|.+..|-+||+|+-...+...++ ..+..|.+++|-|-... .|+.|...| |-+|..+..-....+ ....+.
T Consensus 112 ~fava~nddvVriy~ksst~pt~Lks~sQrnvtclawRPlsas---elavgCr~g-IciW~~s~tln~~r~~~~~s~~~~ 187 (445)
T KOG2139|consen 112 AFAVATNDDVVRIYDKSSTCPTKLKSVSQRNVTCLAWRPLSAS---ELAVGCRAG-ICIWSDSRTLNANRNIRMMSTHHL 187 (445)
T ss_pred hhhhhccCcEEEEeccCCCCCceecchhhcceeEEEeccCCcc---eeeeeecce-eEEEEcCcccccccccccccccch
Confidence 4778889999999986555554555 34567999999886543 466666654 889986532111110 011111
Q ss_pred e--eeeccccceEEEEEeCCCCEEEEeeC-CCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccce
Q 036314 113 K--ILRGHKASVHSIAAETSGNMVCSGSW-DCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCV 189 (347)
Q Consensus 113 ~--~~~~h~~~V~~v~~s~~~~~l~sgs~-Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 189 (347)
+ .-.+| .+|+++.+++||..+++++. |..|.|||..++... .+. .---+.+
T Consensus 188 qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~-----------------------pL~--~~glgg~ 241 (445)
T KOG2139|consen 188 QVLQDPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKI-----------------------PLI--PKGLGGF 241 (445)
T ss_pred hheeCCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcc-----------------------ccc--ccCCCce
Confidence 1 23456 78999999999999999876 567999998765321 111 0111235
Q ss_pred EEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeee-eCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCC-----
Q 036314 190 SSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIF-CGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTS----- 262 (347)
Q Consensus 190 ~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~----- 262 (347)
.-+.| |++.+|+.+..|+..++|+......-.... ....+....++|.+..++.+.+.... +|.+.-.++.
T Consensus 242 slLkwSPdgd~lfaAt~davfrlw~e~q~wt~erw~lgsgrvqtacWspcGsfLLf~~sgsp~--lysl~f~~~~~~~~~ 319 (445)
T KOG2139|consen 242 SLLKWSPDGDVLFAATCDAVFRLWQENQSWTKERWILGSGRVQTACWSPCGSFLLFACSGSPR--LYSLTFDGEDSVFLR 319 (445)
T ss_pred eeEEEcCCCCEEEEecccceeeeehhcccceecceeccCCceeeeeecCCCCEEEEEEcCCce--EEEEeecCCCccccC
Confidence 55677 688999999999999999654322111222 23356667777777766666654443 3332211100
Q ss_pred -------CCeEEe-----cCC----CCCeeEEEeCCCCCeEEEEEeCC--------CcEEEEEcCC
Q 036314 263 -------APVFQF-----SSH----NSWISACKWHNKSWFHLISASYD--------GKVMLWDLRT 304 (347)
Q Consensus 263 -------~~~~~~-----~~h----~~~v~~v~~s~~~~~~l~s~s~D--------~~i~lwd~~~ 304 (347)
..+..+ ... .+...+++|.|.|.+ ||+.=.. ..|.+||.+.
T Consensus 320 ~~~~k~~lliaDL~e~ti~ag~~l~cgeaq~lawDpsGey-Lav~fKg~~~v~~~k~~i~~fdtr~ 384 (445)
T KOG2139|consen 320 PQSIKRVLLIADLQEVTICAGQRLCCGEAQCLAWDPSGEY-LAVIFKGQSFVLLCKLHISRFDTRK 384 (445)
T ss_pred cccceeeeeeccchhhhhhcCcccccCccceeeECCCCCE-EEEEEcCCchhhhhhhhhhhhcccc
Confidence 000011 011 245788999999976 5554332 2366787765
No 222
>KOG4497 consensus Uncharacterized conserved protein WDR8, contains WD repeats [General function prediction only]
Probab=99.35 E-value=2e-10 Score=96.27 Aligned_cols=259 Identities=17% Similarity=0.234 Sum_probs=148.8
Q ss_pred EEEEEecCCeEEEEcCC-CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeee
Q 036314 37 FILTGCYDNLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKIL 115 (347)
Q Consensus 37 ~l~sg~~d~~i~iw~~~-~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~ 115 (347)
+|.....|+.|++|++. .........-.+.+.++.|+|++. +.|.+...|-.|.+|.+.+.+.. .+
T Consensus 63 ilC~~yk~~~vqvwsl~Qpew~ckIdeg~agls~~~WSPdgr---hiL~tseF~lriTVWSL~t~~~~----------~~ 129 (447)
T KOG4497|consen 63 ILCVAYKDPKVQVWSLVQPEWYCKIDEGQAGLSSISWSPDGR---HILLTSEFDLRITVWSLNTQKGY----------LL 129 (447)
T ss_pred eeeeeeccceEEEEEeecceeEEEeccCCCcceeeeECCCcc---eEeeeecceeEEEEEEeccceeE----------Ee
Confidence 56667788999999974 334444555556689999999654 47888889999999999765421 22
Q ss_pred eccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-
Q 036314 116 RGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW- 194 (347)
Q Consensus 116 ~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~- 194 (347)
+--+..+..++|+|||++.+-.++- |..+- ..+.. .. .-..++.+.-.+....++.|
T Consensus 130 ~~pK~~~kg~~f~~dg~f~ai~sRr------DCkdy------v~i~~------c~----~W~ll~~f~~dT~DltgieWs 187 (447)
T KOG4497|consen 130 PHPKTNVKGYAFHPDGQFCAILSRR------DCKDY------VQISS------CK----AWILLKEFKLDTIDLTGIEWS 187 (447)
T ss_pred cccccCceeEEECCCCceeeeeecc------cHHHH------HHHHh------hH----HHHHHHhcCCCcccccCceEC
Confidence 2234556788999999988765532 21110 00000 00 00112222333334455566
Q ss_pred CCCCeEEEEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCC---------------CC
Q 036314 195 PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPR---------------KP 259 (347)
Q Consensus 195 ~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~---------------~~ 259 (347)
|+|..| .+||.--.-.+.....+-.+..+.++|- +++++.|+.|+.+|+.+-- .+
T Consensus 188 Pdg~~l---------aVwd~~Leykv~aYe~~lG~k~v~wsP~-~qflavGsyD~~lrvlnh~tWk~f~eflhl~s~~dp 257 (447)
T KOG4497|consen 188 PDGNWL---------AVWDNVLEYKVYAYERGLGLKFVEWSPC-NQFLAVGSYDQMLRVLNHFTWKPFGEFLHLCSYHDP 257 (447)
T ss_pred CCCcEE---------EEecchhhheeeeeeeccceeEEEeccc-cceEEeeccchhhhhhceeeeeehhhhccchhccCc
Confidence 333333 3555432222222222334555666443 3567777777777664310 00
Q ss_pred ------------------------------------------CCC------CCeEEecCCCCCeeEEEeCCCCCeEEEEE
Q 036314 260 ------------------------------------------GTS------APVFQFSSHNSWISACKWHNKSWFHLISA 291 (347)
Q Consensus 260 ------------------------------------------~~~------~~~~~~~~h~~~v~~v~~s~~~~~~l~s~ 291 (347)
..+ +|...+......+..++||+|. ++++|-
T Consensus 258 ~~~~~~ke~~~~~ql~~~cLsf~p~~~~a~~~~~se~~YE~~~~pv~~~~lkp~tD~pnPk~g~g~lafs~Ds-~y~aTr 336 (447)
T KOG4497|consen 258 TLHLLEKETFSIVQLLHHCLSFTPTDLEAHIWEESETIYEQQMTPVKVHKLKPPTDFPNPKCGAGKLAFSCDS-TYAATR 336 (447)
T ss_pred hhhhhhhhhcchhhhcccccccCCCccccCccccchhhhhhhhcceeeecccCCCCCCCcccccceeeecCCc-eEEeee
Confidence 000 0001111223357789999997 446665
Q ss_pred eC--CCcEEEEEcCCCccceeecCCCCeEEEEeecCCC-EEEEccCCceEEEee
Q 036314 292 SY--DGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGD-SVISGGVDSKLCVSS 342 (347)
Q Consensus 292 s~--D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~D~~v~vw~ 342 (347)
.. -..+.+||++.-+.-..+. ...+|+...|.|++ +|+.+.....+.+|+
T Consensus 337 nd~~PnalW~Wdlq~l~l~avLi-Qk~piraf~WdP~~prL~vctg~srLY~W~ 389 (447)
T KOG4497|consen 337 NDKYPNALWLWDLQNLKLHAVLI-QKHPIRAFEWDPGRPRLVVCTGKSRLYFWA 389 (447)
T ss_pred cCCCCceEEEEechhhhhhhhhh-hccceeEEEeCCCCceEEEEcCCceEEEEc
Confidence 43 2579999998755444443 46689999999876 577777777799996
No 223
>KOG2321 consensus WD40 repeat protein [General function prediction only]
Probab=99.34 E-value=5.1e-10 Score=100.26 Aligned_cols=272 Identities=14% Similarity=0.169 Sum_probs=166.2
Q ss_pred CcCCceeeccCC-CCC-EEEEEecCCeEEEEcCCCeEEEEeeccCC-ceEEEEEeecCCCceEEEEEccCCCcEEEEecc
Q 036314 22 LHDDWVSAVDGS-NPG-FILTGCYDNLGRVWKAGGVCTHILEGHCG-AVSSVNIIKSDGLKYVTVATASKDQTLRLWKFD 98 (347)
Q Consensus 22 ~h~~~v~~~~~~-~~~-~l~sg~~d~~i~iw~~~~~~~~~l~~h~~-~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~ 98 (347)
+|.+.-+.+..+ +|+ ++|||-+-..|++||+....++ |..|.+ .|..+-+..++ ...++-=-.|.+|.+...-
T Consensus 49 e~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanLSLK-FERhlDae~V~feiLsDD---~SK~v~L~~DR~IefHak~ 124 (703)
T KOG2321|consen 49 EMPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANLSLK-FERHLDAEVVDFEILSDD---YSKSVFLQNDRTIEFHAKY 124 (703)
T ss_pred CCccccceeEecCCCcEEEEecccCCceEEEEcccceee-eeecccccceeEEEeccc---hhhheEeecCceeeehhhc
Confidence 567777778877 455 5778889999999998754433 555543 34333332222 1122333456666544321
Q ss_pred ccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccc
Q 036314 99 AEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEA 178 (347)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (347)
. . ...++- ...-..++++.-..-|+.++....|.-++++.+. .
T Consensus 125 G-~----------hy~~RI-P~~GRDm~y~~~scDly~~gsg~evYRlNLEqGr-------------------------f 167 (703)
T KOG2321|consen 125 G-R----------HYRTRI-PKFGRDMKYHKPSCDLYLVGSGSEVYRLNLEQGR-------------------------F 167 (703)
T ss_pred C-e----------eeeeec-CcCCccccccCCCccEEEeecCcceEEEEccccc-------------------------c
Confidence 1 0 000000 1122455655444334444445567667776532 2
Q ss_pred cccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeeeeCe------------eeEEEEeeCCCCcEEEEe
Q 036314 179 ISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGK------------ALNCIDIGGEGSALIAAG 245 (347)
Q Consensus 179 ~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~la~~ 245 (347)
+..+.....+++++.. +.++.|++|+.+|.|..||.++...+..+.... .++.+.|. +++..+++|
T Consensus 168 L~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~-d~gL~~aVG 246 (703)
T KOG2321|consen 168 LNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFR-DDGLHVAVG 246 (703)
T ss_pred ccccccccccceeeeecCccceEEecccCceEEEecchhhhhheeeecccccCCCccccccCcceEEEec-CCceeEEee
Confidence 3334444466777766 456788899999999999998876665554321 37788884 447789999
Q ss_pred cCCCcEEEEeCCCCCCCCCeEEecCCCC--CeeEEEeCCCCCe-EEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEe
Q 036314 246 GSDPILRIWDPRKPGTSAPVFQFSSHNS--WISACKWHNKSWF-HLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCAD 322 (347)
Q Consensus 246 ~~d~~i~iwd~~~~~~~~~~~~~~~h~~--~v~~v~~s~~~~~-~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~ 322 (347)
+.+|.+.|||+|... |+ ....|.. .|..+.|.+.+.. .|+| .....++|||-.+|++...++... .+..++
T Consensus 247 ts~G~v~iyDLRa~~---pl-~~kdh~~e~pi~~l~~~~~~~q~~v~S-~Dk~~~kiWd~~~Gk~~asiEpt~-~lND~C 320 (703)
T KOG2321|consen 247 TSTGSVLIYDLRASK---PL-LVKDHGYELPIKKLDWQDTDQQNKVVS-MDKRILKIWDECTGKPMASIEPTS-DLNDFC 320 (703)
T ss_pred ccCCcEEEEEcccCC---ce-eecccCCccceeeecccccCCCceEEe-cchHHhhhcccccCCceeeccccC-CcCcee
Confidence 999999999998632 22 2234554 5788888766322 2443 334689999999999988887644 477666
Q ss_pred ecC-CCEEEEccCCceEEEe
Q 036314 323 WWR-GDSVISGGVDSKLCVS 341 (347)
Q Consensus 323 ~~~-~~~l~s~s~D~~v~vw 341 (347)
+-| +..+.+|-.+..+.-+
T Consensus 321 ~~p~sGm~f~Ane~~~m~~y 340 (703)
T KOG2321|consen 321 FVPGSGMFFTANESSKMHTY 340 (703)
T ss_pred eecCCceEEEecCCCcceeE
Confidence 655 4467777766665544
No 224
>KOG1409 consensus Uncharacterized conserved protein, contains WD40 repeats and FYVE domains [Function unknown]
Probab=99.34 E-value=9.8e-11 Score=98.64 Aligned_cols=251 Identities=18% Similarity=0.247 Sum_probs=173.9
Q ss_pred EEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEec-cccccccCccccceeeeeeccccceEEEEEeCCCCEE
Q 036314 56 CTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKF-DAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMV 134 (347)
Q Consensus 56 ~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~-~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l 134 (347)
.++.++||.+.|+.....|... .+.+.+.|.++|+|-- +.++. +..+... -..+++++.+.++...|
T Consensus 16 ll~~~eG~~d~vn~~~l~~~e~----gv~~~s~drtvrv~lkrds~q~------wpsI~~~--mP~~~~~~~y~~e~~~L 83 (404)
T KOG1409|consen 16 LLSKIEGSQDDVNAAILIPKEE----GVISVSEDRTVRVWLKRDSGQY------WPSIYHY--MPSPCSAMEYVSESRRL 83 (404)
T ss_pred hhhhhcCchhhhhhheeccCCC----CeEEccccceeeeEEecccccc------Cchhhhh--CCCCceEeeeeccceEE
Confidence 4566889999998877666443 3889999999999963 22221 1222211 14567889999999999
Q ss_pred EEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeC-CCCeEEEEecCCcEEEEE
Q 036314 135 CSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP-QQETIYSASWDHSVRTWD 213 (347)
Q Consensus 135 ~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~l~s~s~dg~v~vwd 213 (347)
+.|=..|++.-+.+...-. .....+.+..|...+..+.|. ..+.+++.+.|..+.---
T Consensus 84 ~vg~~ngtvtefs~sedfn---------------------km~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc 142 (404)
T KOG1409|consen 84 YVGQDNGTVTEFALSEDFN---------------------KMTFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHC 142 (404)
T ss_pred EEEEecceEEEEEhhhhhh---------------------hcchhhhhhhhhcceeeEEecCCceeEEEeccccceEEEe
Confidence 9999999998887653210 112345667788889998885 557899999998886444
Q ss_pred CCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeC
Q 036314 214 VEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASY 293 (347)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~ 293 (347)
.+.+..+..........++.+.-. ....|...|.|..-.+.. ....++.++.+|.+.+.++.|.|... +|.+|..
T Consensus 143 ~e~~~~lg~Y~~~~~~t~~~~d~~---~~fvGd~~gqvt~lr~~~-~~~~~i~~~~~h~~~~~~l~Wd~~~~-~LfSg~~ 217 (404)
T KOG1409|consen 143 TESGNRLGGYNFETPASALQFDAL---YAFVGDHSGQITMLKLEQ-NGCQLITTFNGHTGEVTCLKWDPGQR-LLFSGAS 217 (404)
T ss_pred eccCCcccceEeeccCCCCceeeE---EEEecccccceEEEEEee-cCCceEEEEcCcccceEEEEEcCCCc-EEEeccc
Confidence 455544432221111111111111 333455556666655543 23456889999999999999998764 6999999
Q ss_pred CCcEEEEEcCCCcc-ceeecCCCCeEEEEeecC-CCEEEEccCCceEEEeecc
Q 036314 294 DGKVMLWDLRTAWP-LSVIDSHKDKVLCADWWR-GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 294 D~~i~lwd~~~~~~-~~~~~~h~~~v~~~~~~~-~~~l~s~s~D~~v~vw~~~ 344 (347)
|..+.+||+-.+.- ...+.+|.+.|..+.+.+ -.++.|++.||.|-+|+-+
T Consensus 218 d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~~~t~~l~S~~edg~i~~w~mn 270 (404)
T KOG1409|consen 218 DHSVIMWDIGGRKGTAYELQGHNDKVQALSYAQHTRQLISCGEDGGIVVWNMN 270 (404)
T ss_pred cCceEEEeccCCcceeeeeccchhhhhhhhhhhhheeeeeccCCCeEEEEecc
Confidence 99999999965433 346789999999888854 6679999999999999865
No 225
>KOG0974 consensus WD-repeat protein WDR6, WD repeat superfamily [General function prediction only]
Probab=99.34 E-value=1.8e-10 Score=109.52 Aligned_cols=144 Identities=19% Similarity=0.185 Sum_probs=115.6
Q ss_pred CCCeEEEEecCCcEEEEECCCCceeeeeeeCeee--E--EEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCC
Q 036314 196 QQETIYSASWDHSVRTWDVEMGKDLSDIFCGKAL--N--CIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSH 271 (347)
Q Consensus 196 ~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h 271 (347)
....++.+..++.+.+||...+....++++.... . ++.......-.+++|+--+.|.+|++... ..+. .+.+|
T Consensus 98 e~k~i~l~~~~ns~~i~d~~~~~~~~~i~~~er~~l~~~~~~g~s~~~~~i~~gsv~~~iivW~~~~d--n~p~-~l~GH 174 (967)
T KOG0974|consen 98 ENKKIALVTSRNSLLIRDSKNSSVLSKIQSDERCTLYSSLIIGDSAEELYIASGSVFGEIIVWKPHED--NKPI-RLKGH 174 (967)
T ss_pred hcceEEEEEcCceEEEEecccCceehhcCCCceEEEEeEEEEeccCcEEEEEeccccccEEEEecccc--CCcc-eeccc
Confidence 4567888888999999999888777766655422 1 22222345567889999999999998732 2333 67899
Q ss_pred CCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccce-eecCCCCeEEEEeecCCCEEEEccCCceEEEeecc
Q 036314 272 NSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLS-VIDSHKDKVLCADWWRGDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 272 ~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~-~~~~h~~~v~~~~~~~~~~l~s~s~D~~v~vw~~~ 344 (347)
.+.+-++.|+.+|. ++++.|+|.++|+|++++.+... +.-+|++.|+.+.|.|. +++|++.|.+.++|+-+
T Consensus 175 eG~iF~i~~s~dg~-~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n-~i~t~gedctcrvW~~~ 246 (967)
T KOG0974|consen 175 EGSIFSIVTSLDGR-YIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPN-RIITVGEDCTCRVWGVN 246 (967)
T ss_pred CCceEEEEEccCCc-EEEEEecCcceeeeecccccccCcccccccceeEEEEeccc-eeEEeccceEEEEEecc
Confidence 99999999999986 59999999999999999987766 67799999999999877 99999999999999543
No 226
>KOG0974 consensus WD-repeat protein WDR6, WD repeat superfamily [General function prediction only]
Probab=99.33 E-value=1.3e-10 Score=110.52 Aligned_cols=197 Identities=23% Similarity=0.313 Sum_probs=140.2
Q ss_pred CCceeeccCC-CCCEEEEEecCCeEEEEcCCCeEEEEeeccCCceE--EEEEeecCCCceEEEEEccCCCcEEEEecccc
Q 036314 24 DDWVSAVDGS-NPGFILTGCYDNLGRVWKAGGVCTHILEGHCGAVS--SVNIIKSDGLKYVTVATASKDQTLRLWKFDAE 100 (347)
Q Consensus 24 ~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~~~~~~~l~~h~~~V~--~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~ 100 (347)
.+||....+. ....++.+..++.+-+||..+.++..-..+..... +........ ...++++|+.-++|.+|+....
T Consensus 87 s~wi~g~~l~~e~k~i~l~~~~ns~~i~d~~~~~~~~~i~~~er~~l~~~~~~g~s~-~~~~i~~gsv~~~iivW~~~~d 165 (967)
T KOG0974|consen 87 SDWIFGAKLFEENKKIALVTSRNSLLIRDSKNSSVLSKIQSDERCTLYSSLIIGDSA-EELYIASGSVFGEIIVWKPHED 165 (967)
T ss_pred cccccccchhhhcceEEEEEcCceEEEEecccCceehhcCCCceEEEEeEEEEeccC-cEEEEEeccccccEEEEecccc
Confidence 4666665555 56688888899999999976544433333333221 222222121 4467999999999999998632
Q ss_pred ccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccc
Q 036314 101 ELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAIS 180 (347)
Q Consensus 101 ~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (347)
+ .+. .+.||++.|.++.++-||.+++|.|.|.++|+|++++.+..+ .
T Consensus 166 n--------~p~-~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~------------------------~ 212 (967)
T KOG0974|consen 166 N--------KPI-RLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLG------------------------C 212 (967)
T ss_pred C--------Ccc-eecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccC------------------------c
Confidence 1 111 477999999999999999999999999999999998754321 2
Q ss_pred cccCCccceEEEEeCCCCeEEEEecCCcEEEEECCCCceeeeeee--CeeeEEEEeeCCCCcEEEEecCCCcEEEEeCC
Q 036314 181 TLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFC--GKALNCIDIGGEGSALIAAGGSDPILRIWDPR 257 (347)
Q Consensus 181 ~~~~h~~~v~~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~ 257 (347)
+.-+|+..++.+.+.+. .+++++.|.++++|+.+. ..+..+.. ...+..++.. ++...+.+++.|+.+++||+.
T Consensus 213 ~~fgHsaRvw~~~~~~n-~i~t~gedctcrvW~~~~-~~l~~y~~h~g~~iw~~~~~-~~~~~~vT~g~Ds~lk~~~l~ 288 (967)
T KOG0974|consen 213 TGFGHSARVWACCFLPN-RIITVGEDCTCRVWGVNG-TQLEVYDEHSGKGIWKIAVP-IGVIIKVTGGNDSTLKLWDLN 288 (967)
T ss_pred ccccccceeEEEEeccc-eeEEeccceEEEEEeccc-ceehhhhhhhhcceeEEEEc-CCceEEEeeccCcchhhhhhh
Confidence 44579999998887665 999999999999997543 33332221 2345666663 455678899999999999975
No 227
>KOG2110 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.32 E-value=5.3e-10 Score=95.09 Aligned_cols=195 Identities=12% Similarity=0.169 Sum_probs=130.2
Q ss_pred cceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeCCCCe
Q 036314 120 ASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQET 199 (347)
Q Consensus 120 ~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 199 (347)
..++...|+.+...|..|+.||. ++|+.+..... . ......-.|.-.-|+. ..
T Consensus 6 ~ti~~~~~Nqd~~~lsvGs~~Gy-k~~~~~~~~k~------------------------~-~~~~~~~~IvEmLFSS-SL 58 (391)
T KOG2110|consen 6 PTINFIGFNQDSTLLSVGSKDGY-KIFSCSPFEKC------------------------F-SKDTEGVSIVEMLFSS-SL 58 (391)
T ss_pred cceeeeeeccceeEEEccCCCce-eEEecCchHHh------------------------h-cccCCCeEEEEeeccc-ce
Confidence 44566679999888888998875 67876542110 0 0000111222333433 23
Q ss_pred EEEEecC--CcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeE
Q 036314 200 IYSASWD--HSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISA 277 (347)
Q Consensus 200 l~s~s~d--g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~ 277 (347)
++..+.+ +.+++.+++....+..+.....+-++.+. .+.+++.-+ ..|+|||++...-...+.+...+...+.+
T Consensus 59 vaiV~~~qpr~Lkv~~~Kk~~~ICe~~fpt~IL~VrmN---r~RLvV~Le-e~IyIydI~~MklLhTI~t~~~n~~gl~A 134 (391)
T KOG2110|consen 59 VAIVSIKQPRKLKVVHFKKKTTICEIFFPTSILAVRMN---RKRLVVCLE-ESIYIYDIKDMKLLHTIETTPPNPKGLCA 134 (391)
T ss_pred eEEEecCCCceEEEEEcccCceEEEEecCCceEEEEEc---cceEEEEEc-ccEEEEecccceeehhhhccCCCccceEe
Confidence 3333333 45999999988888888888888888773 234455544 44999999854322223344456666777
Q ss_pred EEeCCCCCeEEEEEe-CCCcEEEEEcCCCccceeecCCCCeEEEEeec-CCCEEEEccCCce-EEEeeccc
Q 036314 278 CKWHNKSWFHLISAS-YDGKVMLWDLRTAWPLSVIDSHKDKVLCADWW-RGDSVISGGVDSK-LCVSSGVS 345 (347)
Q Consensus 278 v~~s~~~~~~l~s~s-~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~-~~~~l~s~s~D~~-v~vw~~~~ 345 (347)
+.+++.+.++..-++ .-|.|.|||..+-+++..+..|++.+-|++|+ +|..|||+|.-|| |||.+.++
T Consensus 135 lS~n~~n~ylAyp~s~t~GdV~l~d~~nl~~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~ 205 (391)
T KOG2110|consen 135 LSPNNANCYLAYPGSTTSGDVVLFDTINLQPVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPE 205 (391)
T ss_pred eccCCCCceEEecCCCCCceEEEEEcccceeeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCC
Confidence 777776655444444 35899999999988999999999999999997 5889999999887 56776653
No 228
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.31 E-value=8.6e-10 Score=101.80 Aligned_cols=210 Identities=12% Similarity=0.051 Sum_probs=123.5
Q ss_pred cEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEee---CCCcEEEEecCCCCCCCccceeeeccCCC
Q 036314 91 TLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGS---WDCTISLWRTNDSDAAGNQVSIKKRKGNN 167 (347)
Q Consensus 91 ~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs---~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~ 167 (347)
.|.+||.+... .+.+..+...+.+.+|+|||+.|+..+ .+..|.+|++.++..
T Consensus 180 ~l~~~d~dg~~----------~~~lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~-------------- 235 (429)
T PRK03629 180 ELRVSDYDGYN----------QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAV-------------- 235 (429)
T ss_pred eEEEEcCCCCC----------CEEeecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCe--------------
Confidence 68888876542 123445667899999999999887544 245688888765321
Q ss_pred ccccccccccccccccCCccceEEEEe-CCCCeEEEE-ecCC--cEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEE
Q 036314 168 QVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSA-SWDH--SVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIA 243 (347)
Q Consensus 168 ~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~-s~dg--~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la 243 (347)
..+..+.++ +....| |+++.|+.. +.++ .|.+||+.++................|+|++..++.
T Consensus 236 ---------~~l~~~~~~---~~~~~~SPDG~~La~~~~~~g~~~I~~~d~~tg~~~~lt~~~~~~~~~~wSPDG~~I~f 303 (429)
T PRK03629 236 ---------RQVASFPRH---NGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAY 303 (429)
T ss_pred ---------EEccCCCCC---cCCeEECCCCCEEEEEEcCCCCcEEEEEECCCCCEEEccCCCCCcCceEECCCCCEEEE
Confidence 112222333 223566 677777654 4444 488899987754332222234556778776654544
Q ss_pred EecCCCcEEEE--eCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCC--CcEEEEEcCCCccceeecCCCCeEE
Q 036314 244 AGGSDPILRIW--DPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYD--GKVMLWDLRTAWPLSVIDSHKDKVL 319 (347)
Q Consensus 244 ~~~~d~~i~iw--d~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D--~~i~lwd~~~~~~~~~~~~h~~~v~ 319 (347)
+...++...|| |+... ....+..+........|+|+|.+++.++..+ ..|.+||+.+++ ...+... ....
T Consensus 304 ~s~~~g~~~Iy~~d~~~g----~~~~lt~~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~-~~~Lt~~-~~~~ 377 (429)
T PRK03629 304 TSDQAGRPQVYKVNINGG----APQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG-VQVLTDT-FLDE 377 (429)
T ss_pred EeCCCCCceEEEEECCCC----CeEEeecCCCCccCEEECCCCCEEEEEEccCCCceEEEEECCCCC-eEEeCCC-CCCC
Confidence 44444555555 55422 1233333444556788999997644444433 358889998775 3334321 2234
Q ss_pred EEeecC-CCEEEEccCCce---EEEee
Q 036314 320 CADWWR-GDSVISGGVDSK---LCVSS 342 (347)
Q Consensus 320 ~~~~~~-~~~l~s~s~D~~---v~vw~ 342 (347)
...|+| |+.|+.++.|+. +.+++
T Consensus 378 ~p~~SpDG~~i~~~s~~~~~~~l~~~~ 404 (429)
T PRK03629 378 TPSIAPNGTMVIYSSSQGMGSVLNLVS 404 (429)
T ss_pred CceECCCCCEEEEEEcCCCceEEEEEE
Confidence 567875 777887777764 44444
No 229
>KOG3881 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.29 E-value=8.7e-11 Score=100.44 Aligned_cols=175 Identities=18% Similarity=0.255 Sum_probs=130.5
Q ss_pred CceeeccCCC--CCEEEEEecC--CeEEEEcCCCeEEEEeeccCC-----------ceEEEEEeecCCCceEEEEEccCC
Q 036314 25 DWVSAVDGSN--PGFILTGCYD--NLGRVWKAGGVCTHILEGHCG-----------AVSSVNIIKSDGLKYVTVATASKD 89 (347)
Q Consensus 25 ~~v~~~~~~~--~~~l~sg~~d--~~i~iw~~~~~~~~~l~~h~~-----------~V~~v~~~~~~~~~~~~l~s~s~D 89 (347)
..+..+.-.+ ..++|+||.. ..+++||+.+- .+++.+-.- -++++.|.+... ...+|+++.-
T Consensus 149 ~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~-~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~g~~--~~~fat~T~~ 225 (412)
T KOG3881|consen 149 PGLYDVRQTDTDPYIVATGGKENINELKIWDLEQS-KQIWSAKNVPNDRLGLRVPVWITDIRFLEGSP--NYKFATITRY 225 (412)
T ss_pred CceeeeccCCCCCceEecCchhcccceeeeecccc-eeeeeccCCCCccccceeeeeeccceecCCCC--CceEEEEecc
Confidence 4455555443 4578889999 88999998643 445554321 245777876432 2478999999
Q ss_pred CcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcc
Q 036314 90 QTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQV 169 (347)
Q Consensus 90 g~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~ 169 (347)
++||+||...+ .+++..|.--+.+++++...|+++++++|..-+.+..||++.+...
T Consensus 226 hqvR~YDt~~q--------RRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~--------------- 282 (412)
T KOG3881|consen 226 HQVRLYDTRHQ--------RRPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLL--------------- 282 (412)
T ss_pred eeEEEecCccc--------CcceeEeccccCcceeeeecCCCcEEEEecccchhheecccCceee---------------
Confidence 99999998654 2566666666889999999999999999999999999998864321
Q ss_pred ccccccccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeeeeCeeeEEEEe
Q 036314 170 EEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDI 234 (347)
Q Consensus 170 ~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~ 234 (347)
...+.+-++.++++.. |.++.+++++.|+.|||+|+.+.+.+...+.....+++-+
T Consensus 283 ---------g~~~kg~tGsirsih~hp~~~~las~GLDRyvRIhD~ktrkll~kvYvKs~lt~il~ 339 (412)
T KOG3881|consen 283 ---------GCGLKGITGSIRSIHCHPTHPVLASCGLDRYVRIHDIKTRKLLHKVYVKSRLTFILL 339 (412)
T ss_pred ---------ccccCCccCCcceEEEcCCCceEEeeccceeEEEeecccchhhhhhhhhccccEEEe
Confidence 1235667788888876 5568999999999999999999777777766666666555
No 230
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.26 E-value=1.4e-09 Score=100.70 Aligned_cols=218 Identities=11% Similarity=0.054 Sum_probs=125.6
Q ss_pred CCcCCceeeccCC-CCCEEEEEecC---CeEEEEcCCCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCC--cEEE
Q 036314 21 SLHDDWVSAVDGS-NPGFILTGCYD---NLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQ--TLRL 94 (347)
Q Consensus 21 ~~h~~~v~~~~~~-~~~~l~sg~~d---~~i~iw~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg--~v~~ 94 (347)
..|...+...+++ +++.|+..+.+ ..+++||..+.....+..+.+...+.+|+|++. ..+++.+.+| .|.+
T Consensus 200 t~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~l~~~~g~~~~~~~SpDG~---~l~~~~s~~g~~~Iy~ 276 (433)
T PRK04922 200 LRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQRELVASFRGINGAPSFSPDGR---RLALTLSRDGNPEIYV 276 (433)
T ss_pred ecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEEeccCCCCccCceECCCCC---EEEEEEeCCCCceEEE
Confidence 3456678888888 45688877644 469999986433334444555556789998654 2344555555 5888
Q ss_pred EeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEee-CCCcEEEE--ecCCCCCCCccceeeeccCCCcccc
Q 036314 95 WKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGS-WDCTISLW--RTNDSDAAGNQVSIKKRKGNNQVEE 171 (347)
Q Consensus 95 wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs-~Dg~I~iw--d~~~~~~~~~~~~~~~~~~~~~~~~ 171 (347)
||+.+++. ..+..|.......+|+|||+.++..+ .++...|| ++.++..
T Consensus 277 ~d~~~g~~----------~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~------------------ 328 (433)
T PRK04922 277 MDLGSRQL----------TRLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSA------------------ 328 (433)
T ss_pred EECCCCCe----------EECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCe------------------
Confidence 88876542 23444544456789999999877555 45664555 4433210
Q ss_pred ccccccccccccCCccceEEEEe-CCCCeEEEEecCC---cEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecC
Q 036314 172 PQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDH---SVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGS 247 (347)
Q Consensus 172 ~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg---~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~ 247 (347)
..+..+........| |+++.|+..+.++ .|.+||+.++... .+..........+++++..++.+...
T Consensus 329 --------~~lt~~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~-~Lt~~~~~~~p~~spdG~~i~~~s~~ 399 (433)
T PRK04922 329 --------ERLTFQGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVR-TLTPGSLDESPSFAPNGSMVLYATRE 399 (433)
T ss_pred --------EEeecCCCCccCEEECCCCCEEEEEECCCCceeEEEEECCCCCeE-ECCCCCCCCCceECCCCCEEEEEEec
Confidence 001111112233455 5788877654443 5889999877543 33322223345676665544444332
Q ss_pred --CCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCC
Q 036314 248 --DPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHN 282 (347)
Q Consensus 248 --d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~ 282 (347)
.+.|.++|+.. . ....+..+...+...+|+|
T Consensus 400 ~g~~~L~~~~~~g--~--~~~~l~~~~g~~~~p~wsp 432 (433)
T PRK04922 400 GGRGVLAAVSTDG--R--VRQRLVSADGEVREPAWSP 432 (433)
T ss_pred CCceEEEEEECCC--C--ceEEcccCCCCCCCCccCC
Confidence 34577777753 1 2344444555566677776
No 231
>KOG2394 consensus WD40 protein DMR-N9 [General function prediction only]
Probab=99.26 E-value=4e-10 Score=100.17 Aligned_cols=191 Identities=15% Similarity=0.113 Sum_probs=120.0
Q ss_pred EEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCC-CEEEEeeCCCcEEEEecCCCCCCCcccee
Q 036314 82 TVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSG-NMVCSGSWDCTISLWRTNDSDAAGNQVSI 160 (347)
Q Consensus 82 ~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~-~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~ 160 (347)
-|+.|=.-|.|.+.|....+........+. --+..|+++.|-|-+ ..++.+-++|.+.+||.+-....
T Consensus 187 dllIGf~tGqvq~idp~~~~~sklfne~r~-----i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~------ 255 (636)
T KOG2394|consen 187 DLLIGFTTGQVQLIDPINFEVSKLFNEERL-----INKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGA------ 255 (636)
T ss_pred ceEEeeccCceEEecchhhHHHHhhhhccc-----ccccceEEEEEEeCCCceEEEEEecCceEEeeccccccC------
Confidence 355677777888887654322111111111 124779999987754 46667788999999986321000
Q ss_pred eeccCCCccccccccccccccccCCccceEEEEeCCCCeEEEE-----ecCCcEEEEECCCCceeeeeeeCeeeEEEEee
Q 036314 161 KKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQETIYSA-----SWDHSVRTWDVEMGKDLSDIFCGKALNCIDIG 235 (347)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~-----s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~ 235 (347)
+.+ ...+++++..+... ..++-+.-|-+- ...+...+|+
T Consensus 256 -------------------------t~p-~~~~~k~~~~f~i~t~ksk~~rNPv~~w~~~----------~g~in~f~FS 299 (636)
T KOG2394|consen 256 -------------------------TAP-SYQALKDGDQFAILTSKSKKTRNPVARWHIG----------EGSINEFAFS 299 (636)
T ss_pred -------------------------CCC-cccccCCCCeeEEeeeeccccCCccceeEec----------cccccceeEc
Confidence 000 00011233322211 111122222221 2245667787
Q ss_pred CCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCC
Q 036314 236 GEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHK 315 (347)
Q Consensus 236 ~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~ 315 (347)
+ ++.++|+.++||.+||||.... ..+..+..--+...||.|||||. +|++|++|.-|.||.+..++.+..-+||+
T Consensus 300 ~-DG~~LA~VSqDGfLRvF~fdt~---eLlg~mkSYFGGLLCvcWSPDGK-yIvtGGEDDLVtVwSf~erRVVARGqGHk 374 (636)
T KOG2394|consen 300 P-DGKYLATVSQDGFLRIFDFDTQ---ELLGVMKSYFGGLLCVCWSPDGK-YIVTGGEDDLVTVWSFEERRVVARGQGHK 374 (636)
T ss_pred C-CCceEEEEecCceEEEeeccHH---HHHHHHHhhccceEEEEEcCCcc-EEEecCCcceEEEEEeccceEEEeccccc
Confidence 6 6779999999999999997642 12233333445689999999996 59999999999999999988888889999
Q ss_pred CeEEEEeec
Q 036314 316 DKVLCADWW 324 (347)
Q Consensus 316 ~~v~~~~~~ 324 (347)
.-|..|+|-
T Consensus 375 SWVs~VaFD 383 (636)
T KOG2394|consen 375 SWVSVVAFD 383 (636)
T ss_pred cceeeEeec
Confidence 999988884
No 232
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.25 E-value=1.6e-09 Score=100.05 Aligned_cols=222 Identities=11% Similarity=0.069 Sum_probs=128.3
Q ss_pred CCcCCceeeccCC-CCCEEEEEecC---CeEEEEcCCCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEe
Q 036314 21 SLHDDWVSAVDGS-NPGFILTGCYD---NLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWK 96 (347)
Q Consensus 21 ~~h~~~v~~~~~~-~~~~l~sg~~d---~~i~iw~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd 96 (347)
..+...+.+.+++ +++.|+..+.+ ..|.+||+.+.....+....+.+.+.+|+|++. ..+++.+.++..++|.
T Consensus 192 ~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~l~~~~g~~~~~~~SPDG~---~la~~~~~~g~~~Iy~ 268 (427)
T PRK02889 192 LSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRVVANFKGSNSAPAWSPDGR---TLAVALSRDGNSQIYT 268 (427)
T ss_pred ccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEEeecCCCCccceEECCCCC---EEEEEEccCCCceEEE
Confidence 3566778888888 45678776643 369999986433334444445567889999654 2345678888888887
Q ss_pred ccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEee-CCCcEEEEecCCCCCCCccceeeeccCCCcccccccc
Q 036314 97 FDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGS-WDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLE 175 (347)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs-~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (347)
++... .....+..|...+....|+|||+.++..+ .++...||.+..... ..
T Consensus 269 ~d~~~--------~~~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g--~~------------------ 320 (427)
T PRK02889 269 VNADG--------SGLRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGG--AA------------------ 320 (427)
T ss_pred EECCC--------CCcEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCC--ce------------------
Confidence 64321 01223444555556778999999776544 457778886542110 00
Q ss_pred ccccccccCCccceEEEEe-CCCCeEEEEecCC---cEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCc-
Q 036314 176 GEAISTLVGHTQCVSSVVW-PQQETIYSASWDH---SVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPI- 250 (347)
Q Consensus 176 ~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg---~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~- 250 (347)
..+ ++.+ .......| |+++.|+..+.++ .|.+||+.++... .+..........|+|++..++.+....+.
T Consensus 321 -~~l-t~~g--~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~-~lt~~~~~~~p~~spdg~~l~~~~~~~g~~ 395 (427)
T PRK02889 321 -QRV-TFTG--SYNTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQVT-ALTDTTRDESPSFAPNGRYILYATQQGGRS 395 (427)
T ss_pred -EEE-ecCC--CCcCceEECCCCCEEEEEEccCCcEEEEEEECCCCCeE-EccCCCCccCceECCCCCEEEEEEecCCCE
Confidence 000 1111 11223445 6788887766554 5899999877543 33322223456777776655555444443
Q ss_pred -EEEEeCCCCCCCCCeEEecCCCCCeeEEEeCC
Q 036314 251 -LRIWDPRKPGTSAPVFQFSSHNSWISACKWHN 282 (347)
Q Consensus 251 -i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~ 282 (347)
+.+.++. +. ....+..+.+.+...+|+|
T Consensus 396 ~l~~~~~~--g~--~~~~l~~~~g~~~~p~wsp 424 (427)
T PRK02889 396 VLAAVSSD--GR--IKQRLSVQGGDVREPSWGP 424 (427)
T ss_pred EEEEEECC--CC--ceEEeecCCCCCCCCccCC
Confidence 4455553 22 2334444555667777876
No 233
>KOG2111 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.25 E-value=3.5e-08 Score=82.66 Aligned_cols=176 Identities=18% Similarity=0.308 Sum_probs=116.5
Q ss_pred CeEEEEc-CCCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceE
Q 036314 45 NLGRVWK-AGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVH 123 (347)
Q Consensus 45 ~~i~iw~-~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~ 123 (347)
+.+.||| ....++..|. -..+|.+|.+.++ .|+. =..+.|.+|....+ ++...++.+....++ +-
T Consensus 75 NkviIWDD~k~~~i~el~-f~~~I~~V~l~r~------riVv-vl~~~I~VytF~~n-----~k~l~~~et~~NPkG-lC 140 (346)
T KOG2111|consen 75 NKVIIWDDLKERCIIELS-FNSEIKAVKLRRD------RIVV-VLENKIYVYTFPDN-----PKLLHVIETRSNPKG-LC 140 (346)
T ss_pred ceEEEEecccCcEEEEEE-eccceeeEEEcCC------eEEE-EecCeEEEEEcCCC-----hhheeeeecccCCCc-eE
Confidence 4799998 4456666665 3466999988763 2333 24568999998643 122223332221222 22
Q ss_pred EEEEeCCCCEEE-EeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeC-CCCeEE
Q 036314 124 SIAAETSGNMVC-SGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP-QQETIY 201 (347)
Q Consensus 124 ~v~~s~~~~~l~-sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~l~ 201 (347)
++.-..+..+|| -|-.-|.|+|-|+...... ....+..|...|.+++.. +|..+|
T Consensus 141 ~~~~~~~k~~LafPg~k~GqvQi~dL~~~~~~-----------------------~p~~I~AH~s~Iacv~Ln~~Gt~vA 197 (346)
T KOG2111|consen 141 SLCPTSNKSLLAFPGFKTGQVQIVDLASTKPN-----------------------APSIINAHDSDIACVALNLQGTLVA 197 (346)
T ss_pred eecCCCCceEEEcCCCccceEEEEEhhhcCcC-----------------------CceEEEcccCceeEEEEcCCccEEE
Confidence 222111222333 2445578888877543210 123567899999999985 778899
Q ss_pred EEecCCc-EEEEECCCCceeeeeeeC---eeeEEEEeeCCCCcEEEEecCCCcEEEEeCCC
Q 036314 202 SASWDHS-VRTWDVEMGKDLSDIFCG---KALNCIDIGGEGSALIAAGGSDPILRIWDPRK 258 (347)
Q Consensus 202 s~s~dg~-v~vwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~ 258 (347)
|+|..|+ |||||.+++..+..+.-+ ..+.|++|+|+ ...+|++++-|+++||.++.
T Consensus 198 TaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~-~s~LavsSdKgTlHiF~l~~ 257 (346)
T KOG2111|consen 198 TASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFSPN-SSWLAVSSDKGTLHIFSLRD 257 (346)
T ss_pred EeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeCCC-ccEEEEEcCCCeEEEEEeec
Confidence 9999998 789999999998887643 46899999765 56889999999999999875
No 234
>KOG4190 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.25 E-value=1.3e-11 Score=110.01 Aligned_cols=207 Identities=19% Similarity=0.256 Sum_probs=140.6
Q ss_pred eeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEE
Q 036314 112 FKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSS 191 (347)
Q Consensus 112 ~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 191 (347)
+..+.||+..|+.++--.+.+-++++|.|+||++|.+...... .-+..+..++..|+++|.+
T Consensus 728 L~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~------------------~~tsaCQfTY~aHkk~i~~ 789 (1034)
T KOG4190|consen 728 LCNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDE------------------IGTSACQFTYQAHKKPIHD 789 (1034)
T ss_pred eecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCc------------------cccceeeeEhhhccCcccc
Confidence 4568899999999876667788999999999999988642110 0012345678889999999
Q ss_pred EEeC-CCCeEEEEecCCcEEEEECCCCceeeeeee------CeeeEEEEeeCCCCcEE-EEecCCCcEEEEeCCCCCCCC
Q 036314 192 VVWP-QQETIYSASWDHSVRTWDVEMGKDLSDIFC------GKALNCIDIGGEGSALI-AAGGSDPILRIWDPRKPGTSA 263 (347)
Q Consensus 192 ~~~~-~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~------~~~~~~~~~~~~~~~~l-a~~~~d~~i~iwd~~~~~~~~ 263 (347)
+.|- +.++++ +.|+.|.+||.--++.+..+.. ...+.|+.- .+..++ |.++...+|+++|.|..+-.-
T Consensus 790 igfL~~lr~i~--ScD~giHlWDPFigr~Laq~~dapk~~a~~~ikcl~n--v~~~iliAgcsaeSTVKl~DaRsce~~~ 865 (1034)
T KOG4190|consen 790 IGFLADLRSIA--SCDGGIHLWDPFIGRLLAQMEDAPKEGAGGNIKCLEN--VDRHILIAGCSAESTVKLFDARSCEWTC 865 (1034)
T ss_pred eeeeeccceee--eccCcceeecccccchhHhhhcCcccCCCceeEeccc--Ccchheeeeccchhhheeeeccccccee
Confidence 9874 444555 5689999999877776654432 123444422 233444 444788999999988643211
Q ss_pred C--eEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeecCCCEEEEccCCceEEE-
Q 036314 264 P--VFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGGVDSKLCV- 340 (347)
Q Consensus 264 ~--~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~D~~v~v- 340 (347)
. +...++....+.+++..|.|. .+|.+=.+|.|.+.|.|+|+.+..+..-+-..+-++-..++.|+....|.++.|
T Consensus 866 E~kVcna~~Pna~~R~iaVa~~GN-~lAa~LSnGci~~LDaR~G~vINswrpmecdllqlaapsdq~L~~saldHslaVn 944 (1034)
T KOG4190|consen 866 ELKVCNAPGPNALTRAIAVADKGN-KLAAALSNGCIAILDARNGKVINSWRPMECDLLQLAAPSDQALAQSALDHSLAVN 944 (1034)
T ss_pred eEEeccCCCCchheeEEEeccCcc-hhhHHhcCCcEEEEecCCCceeccCCcccchhhhhcCchhHHHHhhcccceeEee
Confidence 1 222245566788999988885 588888899999999999988777654333344444333445666666777766
Q ss_pred e
Q 036314 341 S 341 (347)
Q Consensus 341 w 341 (347)
|
T Consensus 945 W 945 (1034)
T KOG4190|consen 945 W 945 (1034)
T ss_pred e
Confidence 5
No 235
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.24 E-value=6e-09 Score=96.68 Aligned_cols=233 Identities=11% Similarity=0.075 Sum_probs=131.0
Q ss_pred eEEEEcCCCeEEEEeeccCCceEEEEEeecCCCceEEEEEc-cCCC--cEEEEeccccccccCccccceeeeeeccccce
Q 036314 46 LGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATA-SKDQ--TLRLWKFDAEELVNHPKKIRSFKILRGHKASV 122 (347)
Q Consensus 46 ~i~iw~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~-s~Dg--~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V 122 (347)
.+.++|..|...+.+..+...+.+..|+|++. .|+-. ..++ .|.+||+.+++. +.+..+. ...
T Consensus 199 ~l~i~d~dG~~~~~l~~~~~~~~~p~wSPDG~----~La~~s~~~g~~~L~~~dl~tg~~-------~~lt~~~---g~~ 264 (448)
T PRK04792 199 QLMIADYDGYNEQMLLRSPEPLMSPAWSPDGR----KLAYVSFENRKAEIFVQDIYTQVR-------EKVTSFP---GIN 264 (448)
T ss_pred EEEEEeCCCCCceEeecCCCcccCceECCCCC----EEEEEEecCCCcEEEEEECCCCCe-------EEecCCC---CCc
Confidence 56666776655566667777888999999653 34433 3333 577778766532 1122222 223
Q ss_pred EEEEEeCCCCEEE-EeeCCCc--EEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CCCC
Q 036314 123 HSIAAETSGNMVC-SGSWDCT--ISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQE 198 (347)
Q Consensus 123 ~~v~~s~~~~~l~-sgs~Dg~--I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~ 198 (347)
...+|+|||+.|+ +.+.++. |.++|+.++. ...+..+........| |+++
T Consensus 265 ~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~--------------------------~~~lt~~~~~~~~p~wSpDG~ 318 (448)
T PRK04792 265 GAPRFSPDGKKLALVLSKDGQPEIYVVDIATKA--------------------------LTRITRHRAIDTEPSWHPDGK 318 (448)
T ss_pred CCeeECCCCCEEEEEEeCCCCeEEEEEECCCCC--------------------------eEECccCCCCccceEECCCCC
Confidence 4678999999765 5677776 5555654421 1112222223344556 5777
Q ss_pred eEEEEec-CCc--EEEEECCCCceeeeee-eCeeeEEEEeeCCCCcEEEEecCCCc--EEEEeCCCCCCCCCeEEecCCC
Q 036314 199 TIYSASW-DHS--VRTWDVEMGKDLSDIF-CGKALNCIDIGGEGSALIAAGGSDPI--LRIWDPRKPGTSAPVFQFSSHN 272 (347)
Q Consensus 199 ~l~s~s~-dg~--v~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~la~~~~d~~--i~iwd~~~~~~~~~~~~~~~h~ 272 (347)
.|+..+. ++. |.++|+.+++.. .+. .........++|++..++.+...++. |.++|+.... ...+...
T Consensus 319 ~I~f~s~~~g~~~Iy~~dl~~g~~~-~Lt~~g~~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~----~~~lt~~- 392 (448)
T PRK04792 319 SLIFTSERGGKPQIYRVNLASGKVS-RLTFEGEQNLGGSITPDGRSMIMVNRTNGKFNIARQDLETGA----MQVLTST- 392 (448)
T ss_pred EEEEEECCCCCceEEEEECCCCCEE-EEecCCCCCcCeeECCCCCEEEEEEecCCceEEEEEECCCCC----eEEccCC-
Confidence 7655543 344 555677766533 232 22222345677766655555444554 4456765321 2222222
Q ss_pred CCeeEEEeCCCCCeEEEEEeCCCc--EEEEEcCCCccceeecCCCCeEEEEeecC
Q 036314 273 SWISACKWHNKSWFHLISASYDGK--VMLWDLRTAWPLSVIDSHKDKVLCADWWR 325 (347)
Q Consensus 273 ~~v~~v~~s~~~~~~l~s~s~D~~--i~lwd~~~~~~~~~~~~h~~~v~~~~~~~ 325 (347)
.......|+|++..++.+...++. +.+++.+ +.....+..+.+.+...+|+|
T Consensus 393 ~~d~~ps~spdG~~I~~~~~~~g~~~l~~~~~~-G~~~~~l~~~~g~~~~p~Wsp 446 (448)
T PRK04792 393 RLDESPSVAPNGTMVIYSTTYQGKQVLAAVSID-GRFKARLPAGQGEVKSPAWSP 446 (448)
T ss_pred CCCCCceECCCCCEEEEEEecCCceEEEEEECC-CCceEECcCCCCCcCCCccCC
Confidence 122345799999875665555554 6666774 555666666666777778875
No 236
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.24 E-value=5e-09 Score=97.12 Aligned_cols=233 Identities=13% Similarity=0.092 Sum_probs=131.6
Q ss_pred eEEEEcCCCeEEEEeeccCCceEEEEEeecCCCceEEEEEccC-C--CcEEEEeccccccccCccccceeeeeeccccce
Q 036314 46 LGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASK-D--QTLRLWKFDAEELVNHPKKIRSFKILRGHKASV 122 (347)
Q Consensus 46 ~i~iw~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~-D--g~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V 122 (347)
.+.++|..|...+.+..+...+.+..|+|++. .|+..+. + ..|.+|++.+++. ..+......+
T Consensus 180 ~l~~~d~~g~~~~~l~~~~~~~~~p~wSpDG~----~la~~s~~~~~~~l~~~~l~~g~~----------~~l~~~~g~~ 245 (430)
T PRK00178 180 TLQRSDYDGARAVTLLQSREPILSPRWSPDGK----RIAYVSFEQKRPRIFVQNLDTGRR----------EQITNFEGLN 245 (430)
T ss_pred EEEEECCCCCCceEEecCCCceeeeeECCCCC----EEEEEEcCCCCCEEEEEECCCCCE----------EEccCCCCCc
Confidence 46777877766666767778889999999653 4544433 2 3688889876542 1122223334
Q ss_pred EEEEEeCCCCEEE-EeeCCC--cEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CCCC
Q 036314 123 HSIAAETSGNMVC-SGSWDC--TISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQE 198 (347)
Q Consensus 123 ~~v~~s~~~~~l~-sgs~Dg--~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~ 198 (347)
...+|+|||+.|+ +.+.++ .|.+||+.+... ..+..+........| |+++
T Consensus 246 ~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~~~--------------------------~~lt~~~~~~~~~~~spDg~ 299 (430)
T PRK00178 246 GAPAWSPDGSKLAFVLSKDGNPEIYVMDLASRQL--------------------------SRVTNHPAIDTEPFWGKDGR 299 (430)
T ss_pred CCeEECCCCCEEEEEEccCCCceEEEEECCCCCe--------------------------EEcccCCCCcCCeEECCCCC
Confidence 5678999998776 555665 466777764321 111122222333456 5777
Q ss_pred eEEEEec-CC--cEEEEECCCCceeeeeee-CeeeEEEEeeCCCCcEEEEecCCC--cEEEEeCCCCCCCCCeEEecCCC
Q 036314 199 TIYSASW-DH--SVRTWDVEMGKDLSDIFC-GKALNCIDIGGEGSALIAAGGSDP--ILRIWDPRKPGTSAPVFQFSSHN 272 (347)
Q Consensus 199 ~l~s~s~-dg--~v~vwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~la~~~~d~--~i~iwd~~~~~~~~~~~~~~~h~ 272 (347)
.|+..+. ++ .|.++|+.+++.. .+.. ........+++++..++.+...++ .|.++|+.... ...+. +.
T Consensus 300 ~i~f~s~~~g~~~iy~~d~~~g~~~-~lt~~~~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~----~~~lt-~~ 373 (430)
T PRK00178 300 TLYFTSDRGGKPQIYKVNVNGGRAE-RVTFVGNYNARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGS----VRILT-DT 373 (430)
T ss_pred EEEEEECCCCCceEEEEECCCCCEE-EeecCCCCccceEECCCCCEEEEEEccCCceEEEEEECCCCC----EEEcc-CC
Confidence 7665553 33 4666787766532 2222 222233566666554444443343 57788876422 22222 12
Q ss_pred CCeeEEEeCCCCCeEEEEEeCCC--cEEEEEcCCCccceeecCCCCeEEEEeecC
Q 036314 273 SWISACKWHNKSWFHLISASYDG--KVMLWDLRTAWPLSVIDSHKDKVLCADWWR 325 (347)
Q Consensus 273 ~~v~~v~~s~~~~~~l~s~s~D~--~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~ 325 (347)
.......|+|+|..++.+...++ .+.+++++. .....+..+.+.+...+|+|
T Consensus 374 ~~~~~p~~spdg~~i~~~~~~~g~~~l~~~~~~g-~~~~~l~~~~g~~~~p~ws~ 427 (430)
T PRK00178 374 SLDESPSVAPNGTMLIYATRQQGRGVLMLVSING-RVRLPLPTAQGEVREPSWSP 427 (430)
T ss_pred CCCCCceECCCCCEEEEEEecCCceEEEEEECCC-CceEECcCCCCCcCCCccCC
Confidence 22335689999976555555444 466667753 34445555556677777764
No 237
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.24 E-value=7.8e-09 Score=95.50 Aligned_cols=230 Identities=13% Similarity=0.062 Sum_probs=130.6
Q ss_pred eEEEEcCCCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCC---CcEEEEeccccccccCccccceeeeeeccccce
Q 036314 46 LGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKD---QTLRLWKFDAEELVNHPKKIRSFKILRGHKASV 122 (347)
Q Consensus 46 ~i~iw~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~D---g~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V 122 (347)
.+.++|..+...+.+..+...+.+.+|+|++. .|+..+.+ .+|.+||+.+++. ..+..+...+
T Consensus 171 ~l~~~d~~g~~~~~l~~~~~~~~~p~~Spdg~----~la~~~~~~~~~~i~v~d~~~g~~----------~~~~~~~~~~ 236 (417)
T TIGR02800 171 ELQVADYDGANPQTITRSREPILSPAWSPDGQ----KLAYVSFESGKPEIYVQDLATGQR----------EKVASFPGMN 236 (417)
T ss_pred eEEEEcCCCCCCEEeecCCCceecccCCCCCC----EEEEEEcCCCCcEEEEEECCCCCE----------EEeecCCCCc
Confidence 57777876655566667777788999999553 45544432 4799999876532 1233445556
Q ss_pred EEEEEeCCCCEEE-EeeCCC--cEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CCCC
Q 036314 123 HSIAAETSGNMVC-SGSWDC--TISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQE 198 (347)
Q Consensus 123 ~~v~~s~~~~~l~-sgs~Dg--~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~ 198 (347)
.+.+|+|||+.|+ +.+.++ .|.+|++.+... ..+..+........| ++++
T Consensus 237 ~~~~~spDg~~l~~~~~~~~~~~i~~~d~~~~~~--------------------------~~l~~~~~~~~~~~~s~dg~ 290 (417)
T TIGR02800 237 GAPAFSPDGSKLAVSLSKDGNPDIYVMDLDGKQL--------------------------TRLTNGPGIDTEPSWSPDGK 290 (417)
T ss_pred cceEECCCCCEEEEEECCCCCccEEEEECCCCCE--------------------------EECCCCCCCCCCEEECCCCC
Confidence 7789999998665 555555 477777764321 111112222223345 5777
Q ss_pred eEEEEecC-C--cEEEEECCCCceeeeee-eCeeeEEEEeeCCCCcEEEEecCCC---cEEEEeCCCCCCCCCeEEecCC
Q 036314 199 TIYSASWD-H--SVRTWDVEMGKDLSDIF-CGKALNCIDIGGEGSALIAAGGSDP---ILRIWDPRKPGTSAPVFQFSSH 271 (347)
Q Consensus 199 ~l~s~s~d-g--~v~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~la~~~~d~---~i~iwd~~~~~~~~~~~~~~~h 271 (347)
.|+.++.. + .|.++|+.+++.. .+. .........+++++. .++.+..++ .|.+||+... . ...+..+
T Consensus 291 ~l~~~s~~~g~~~iy~~d~~~~~~~-~l~~~~~~~~~~~~spdg~-~i~~~~~~~~~~~i~~~d~~~~-~---~~~l~~~ 364 (417)
T TIGR02800 291 SIAFTSDRGGSPQIYMMDADGGEVR-RLTFRGGYNASPSWSPDGD-LIAFVHREGGGFNIAVMDLDGG-G---ERVLTDT 364 (417)
T ss_pred EEEEEECCCCCceEEEEECCCCCEE-EeecCCCCccCeEECCCCC-EEEEEEccCCceEEEEEeCCCC-C---eEEccCC
Confidence 77665543 3 4667787766532 232 233445567766654 555555454 7888887642 1 2223222
Q ss_pred CCCeeEEEeCCCCCeEEEEEeCCC--cEEEEEcCCCccceeecCCCCeEEEEee
Q 036314 272 NSWISACKWHNKSWFHLISASYDG--KVMLWDLRTAWPLSVIDSHKDKVLCADW 323 (347)
Q Consensus 272 ~~~v~~v~~s~~~~~~l~s~s~D~--~i~lwd~~~~~~~~~~~~h~~~v~~~~~ 323 (347)
.......|+|++..++++...++ .+.+.+.. +.....+..+.+.+...+|
T Consensus 365 -~~~~~p~~spdg~~l~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~g~~~~~~w 416 (417)
T TIGR02800 365 -GLDESPSFAPNGRMILYATTRGGRGVLGLVSTD-GRFRARLPLGNGDVREPAW 416 (417)
T ss_pred -CCCCCceECCCCCEEEEEEeCCCcEEEEEEECC-CceeeECCCCCCCcCCCCC
Confidence 22345689999976444444443 34455543 4444445444455555555
No 238
>KOG2139 consensus WD40 repeat protein [General function prediction only]
Probab=99.23 E-value=4.8e-09 Score=89.20 Aligned_cols=201 Identities=17% Similarity=0.287 Sum_probs=127.0
Q ss_pred ceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeee-ccccceEEEEEeCCC-CEEEEeeCCCcE
Q 036314 66 AVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILR-GHKASVHSIAAETSG-NMVCSGSWDCTI 143 (347)
Q Consensus 66 ~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~-~h~~~V~~v~~s~~~-~~l~sgs~Dg~I 143 (347)
.+..++|++- ...++.+..|-+||+|+-.... ...++ .....|++++|-|.+ +.|+.|... -|
T Consensus 100 dlr~~aWhqH----~~~fava~nddvVriy~ksst~----------pt~Lks~sQrnvtclawRPlsaselavgCr~-gI 164 (445)
T KOG2139|consen 100 DLRGVAWHQH----IIAFAVATNDDVVRIYDKSSTC----------PTKLKSVSQRNVTCLAWRPLSASELAVGCRA-GI 164 (445)
T ss_pred ceeeEeechh----hhhhhhhccCcEEEEeccCCCC----------CceecchhhcceeEEEeccCCcceeeeeecc-ee
Confidence 4566777762 2246889999999999966421 11121 235679999999876 455656554 67
Q ss_pred EEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeC-CCCeEEEEecC-CcEEEEECCCCceee
Q 036314 144 SLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP-QQETIYSASWD-HSVRTWDVEMGKDLS 221 (347)
Q Consensus 144 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~l~s~s~d-g~v~vwd~~~~~~~~ 221 (347)
.+|............. .. ... ...+....|| .+|.++.|. ++..+++++.+ ..|.|||..++..+.
T Consensus 165 ciW~~s~tln~~r~~~-----~~-----s~~-~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~p 232 (445)
T KOG2139|consen 165 CIWSDSRTLNANRNIR-----MM-----STH-HLQVLQDPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIP 232 (445)
T ss_pred EEEEcCcccccccccc-----cc-----ccc-chhheeCCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCccc
Confidence 8997653221111000 00 000 0112234556 689999995 67778887765 579999999887655
Q ss_pred eee-eCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcE
Q 036314 222 DIF-CGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKV 297 (347)
Q Consensus 222 ~~~-~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i 297 (347)
-.. ....+.-+.++|++. .+.++.-|+..++|...+.....+.. -..++|....|+|+|..+|.+++...++
T Consensus 233 L~~~glgg~slLkwSPdgd-~lfaAt~davfrlw~e~q~wt~erw~---lgsgrvqtacWspcGsfLLf~~sgsp~l 305 (445)
T KOG2139|consen 233 LIPKGLGGFSLLKWSPDGD-VLFAATCDAVFRLWQENQSWTKERWI---LGSGRVQTACWSPCGSFLLFACSGSPRL 305 (445)
T ss_pred ccccCCCceeeEEEcCCCC-EEEEecccceeeeehhcccceeccee---ccCCceeeeeecCCCCEEEEEEcCCceE
Confidence 432 234567788877665 55566789999999765433322222 2334899999999999888887765443
No 239
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.23 E-value=3.4e-09 Score=98.25 Aligned_cols=218 Identities=12% Similarity=0.029 Sum_probs=127.5
Q ss_pred CCCcCCceeeccCC-CCCEEEEEec---CCeEEEEcCCCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCc--EE
Q 036314 20 PSLHDDWVSAVDGS-NPGFILTGCY---DNLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQT--LR 93 (347)
Q Consensus 20 ~~~h~~~v~~~~~~-~~~~l~sg~~---d~~i~iw~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~--v~ 93 (347)
...|...+...+++ +++.|+..+. +..|++||+.+.....+..+.+.+.+.+|+|++. ..+++.+.++. |.
T Consensus 197 lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~~l~~~~g~~~~~~~SPDG~---~la~~~~~~g~~~Iy 273 (435)
T PRK05137 197 LTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRELVGNFPGMTFAPRFSPDGR---KVVMSLSQGGNTDIY 273 (435)
T ss_pred EecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEEEeecCCCcccCcEECCCCC---EEEEEEecCCCceEE
Confidence 34577788888888 4567777664 4689999986544455666777778889999653 24456677766 55
Q ss_pred EEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEee-CCC--cEEEEecCCCCCCCccceeeeccCCCccc
Q 036314 94 LWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGS-WDC--TISLWRTNDSDAAGNQVSIKKRKGNNQVE 170 (347)
Q Consensus 94 ~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs-~Dg--~I~iwd~~~~~~~~~~~~~~~~~~~~~~~ 170 (347)
+||+.+++ ...+..|........|+|||+.++..+ .++ .|.++|+.....
T Consensus 274 ~~d~~~~~----------~~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~----------------- 326 (435)
T PRK05137 274 TMDLRSGT----------TTRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNP----------------- 326 (435)
T ss_pred EEECCCCc----------eEEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCe-----------------
Confidence 55765543 223445555566789999999877655 444 466666543211
Q ss_pred cccccccccccccCCccceEEEEe-CCCCeEEEEecC---CcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEec
Q 036314 171 EPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWD---HSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGG 246 (347)
Q Consensus 171 ~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~d---g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~ 246 (347)
+.+..+...+....| |+++.|+..+.+ ..|.+||+..+. ...+..........|+|++..++.+..
T Consensus 327 ---------~~lt~~~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~-~~~lt~~~~~~~p~~spDG~~i~~~~~ 396 (435)
T PRK05137 327 ---------RRISFGGGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSG-ERILTSGFLVEGPTWAPNGRVIMFFRQ 396 (435)
T ss_pred ---------EEeecCCCcccCeEECCCCCEEEEEEcCCCceEEEEEECCCCc-eEeccCCCCCCCCeECCCCCEEEEEEc
Confidence 111111222334456 678887766544 257788875543 233333333456678776655444443
Q ss_pred CC-----CcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCC
Q 036314 247 SD-----PILRIWDPRKPGTSAPVFQFSSHNSWISACKWHN 282 (347)
Q Consensus 247 ~d-----~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~ 282 (347)
.. ..+.++|+.... ...+. ....+...+|+|
T Consensus 397 ~~~~~~~~~L~~~dl~g~~----~~~l~-~~~~~~~p~Wsp 432 (435)
T PRK05137 397 TPGSGGAPKLYTVDLTGRN----EREVP-TPGDASDPAWSP 432 (435)
T ss_pred cCCCCCcceEEEEECCCCc----eEEcc-CCCCccCcccCC
Confidence 22 357777775321 22333 222355566765
No 240
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.21 E-value=4.7e-08 Score=87.99 Aligned_cols=275 Identities=13% Similarity=0.110 Sum_probs=149.1
Q ss_pred EEEEEecCCeEEEEcCC-CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeee
Q 036314 37 FILTGCYDNLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKIL 115 (347)
Q Consensus 37 ~l~sg~~d~~i~iw~~~-~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~ 115 (347)
++++-..++.+.+.|.. .+.+..+......-..+.|++++ ++++.++.||.|.++|+.+.+. ++++
T Consensus 8 ~~V~~~~~~~v~viD~~t~~~~~~i~~~~~~h~~~~~s~Dg----r~~yv~~rdg~vsviD~~~~~~---------v~~i 74 (369)
T PF02239_consen 8 FYVVERGSGSVAVIDGATNKVVARIPTGGAPHAGLKFSPDG----RYLYVANRDGTVSVIDLATGKV---------VATI 74 (369)
T ss_dssp EEEEEGGGTEEEEEETTT-SEEEEEE-STTEEEEEE-TT-S----SEEEEEETTSEEEEEETTSSSE---------EEEE
T ss_pred EEEEecCCCEEEEEECCCCeEEEEEcCCCCceeEEEecCCC----CEEEEEcCCCeEEEEECCcccE---------EEEE
Confidence 34566678999999975 46677777544433446677743 3567778899999999987653 3344
Q ss_pred eccccceEEEEEeCCCCEEEEee-CCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe
Q 036314 116 RGHKASVHSIAAETSGNMVCSGS-WDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW 194 (347)
Q Consensus 116 ~~h~~~V~~v~~s~~~~~l~sgs-~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 194 (347)
+.- ....++++++||++++++. .++.+.++|.++.+....... .. .........+.++..
T Consensus 75 ~~G-~~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~-~~-----------------~~~~~~~~Rv~aIv~ 135 (369)
T PF02239_consen 75 KVG-GNPRGIAVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPT-GG-----------------MPVDGPESRVAAIVA 135 (369)
T ss_dssp E-S-SEEEEEEE--TTTEEEEEEEETTEEEEEETTT--EEEEEE---E-----------------E-TTTS---EEEEEE
T ss_pred ecC-CCcceEEEcCCCCEEEEEecCCCceeEeccccccceeeccc-cc-----------------ccccccCCCceeEEe
Confidence 433 3357899999999888665 689999999876532111000 00 000012233455543
Q ss_pred -CCCCeEEEEecC-CcEEEEECCCCceee--eeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCC---------
Q 036314 195 -PQQETIYSASWD-HSVRTWDVEMGKDLS--DIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGT--------- 261 (347)
Q Consensus 195 -~~~~~l~s~s~d-g~v~vwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~--------- 261 (347)
+....++..-.| +.|-+-|......+. .+..........+.+++..++++...++.|.++|......
T Consensus 136 s~~~~~fVv~lkd~~~I~vVdy~d~~~~~~~~i~~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~~~k~v~~i~~g~~ 215 (369)
T PF02239_consen 136 SPGRPEFVVNLKDTGEIWVVDYSDPKNLKVTTIKVGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTKTGKLVALIDTGKK 215 (369)
T ss_dssp -SSSSEEEEEETTTTEEEEEETTTSSCEEEEEEE--TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTTTEEEEEEE-SSS
T ss_pred cCCCCEEEEEEccCCeEEEEEeccccccceeeecccccccccccCcccceeeecccccceeEEEeeccceEEEEeecccc
Confidence 444544444444 667777876654332 2223334555667676665666666677888887653110
Q ss_pred C-------------------------------------------CCeEEecCCCCCeeEEEeCCCCCeEEEEE----eCC
Q 036314 262 S-------------------------------------------APVFQFSSHNSWISACKWHNKSWFHLISA----SYD 294 (347)
Q Consensus 262 ~-------------------------------------------~~~~~~~~h~~~v~~v~~s~~~~~~l~s~----s~D 294 (347)
+ +.+.++...... .-++.+|++.+ |... ...
T Consensus 216 p~~~~~~~~php~~g~vw~~~~~~~~~~~~ig~~~v~v~d~~~wkvv~~I~~~G~g-lFi~thP~s~~-vwvd~~~~~~~ 293 (369)
T PF02239_consen 216 PHPGPGANFPHPGFGPVWATSGLGYFAIPLIGTDPVSVHDDYAWKVVKTIPTQGGG-LFIKTHPDSRY-VWVDTFLNPDA 293 (369)
T ss_dssp BEETTEEEEEETTTEEEEEEEBSSSSEEEEEE--TTT-STTTBTSEEEEEE-SSSS---EE--TT-SE-EEEE-TT-SSH
T ss_pred ccccccccccCCCcceEEeeccccceecccccCCccccchhhcCeEEEEEECCCCc-ceeecCCCCcc-EEeeccCCCCC
Confidence 0 000111111122 33567888876 5555 456
Q ss_pred CcEEEEEcCCCccceeecCCC-CeEEEEeecC-CCE-EEEccC-CceEEEeeccc
Q 036314 295 GKVMLWDLRTAWPLSVIDSHK-DKVLCADWWR-GDS-VISGGV-DSKLCVSSGVS 345 (347)
Q Consensus 295 ~~i~lwd~~~~~~~~~~~~h~-~~v~~~~~~~-~~~-l~s~s~-D~~v~vw~~~~ 345 (347)
++|.++|.++.+.+.++.... ..+.-++|++ |+. .+|.-. ++.|.|++..+
T Consensus 294 ~~v~viD~~tl~~~~~i~~~~~~~~~h~ef~~dG~~v~vS~~~~~~~i~v~D~~T 348 (369)
T PF02239_consen 294 DTVQVIDKKTLKVVKTITPGPGKRVVHMEFNPDGKEVWVSVWDGNGAIVVYDAKT 348 (369)
T ss_dssp T-EEEEECCGTEEEE-HHHHHT--EEEEEE-TTSSEEEEEEE--TTEEEEEETTT
T ss_pred ceEEEEECcCcceeEEEeccCCCcEeccEECCCCCEEEEEEecCCCEEEEEECCC
Confidence 899999999987666664222 2478899984 665 344433 44899998764
No 241
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.20 E-value=2.4e-09 Score=87.58 Aligned_cols=127 Identities=16% Similarity=0.339 Sum_probs=87.1
Q ss_pred cEEEEECCC-Cceeeeeee--CeeeEEEEeeCCCCcEEEE-ecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCC
Q 036314 208 SVRTWDVEM-GKDLSDIFC--GKALNCIDIGGEGSALIAA-GGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNK 283 (347)
Q Consensus 208 ~v~vwd~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~la~-~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~ 283 (347)
...+|-++. +.....+.. ..++..++|+|++..+++. |..+..|.+||++ ..++..+ +...+..+.|+|+
T Consensus 38 ~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~----~~~i~~~--~~~~~n~i~wsP~ 111 (194)
T PF08662_consen 38 EFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVK----GKKIFSF--GTQPRNTISWSPD 111 (194)
T ss_pred eEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEEEcCc----ccEeEee--cCCCceEEEECCC
Confidence 355555522 223333332 3368999998877665444 4457799999986 2335555 4567789999999
Q ss_pred CCeEEEEEeC---CCcEEEEEcCCCccceeecCCCCeEEEEeecC-CCEEEEccC------CceEEEeec
Q 036314 284 SWFHLISASY---DGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGV------DSKLCVSSG 343 (347)
Q Consensus 284 ~~~~l~s~s~---D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~------D~~v~vw~~ 343 (347)
|.+ |+.|+. .|.+.+||.++.+.+.+++ |. .+..++|+| |++|++++. |..++||+-
T Consensus 112 G~~-l~~~g~~n~~G~l~~wd~~~~~~i~~~~-~~-~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~ 178 (194)
T PF08662_consen 112 GRF-LVLAGFGNLNGDLEFWDVRKKKKISTFE-HS-DATDVEWSPDGRYLATATTSPRLRVDNGFKIWSF 178 (194)
T ss_pred CCE-EEEEEccCCCcEEEEEECCCCEEeeccc-cC-cEEEEEEcCCCCEEEEEEeccceeccccEEEEEe
Confidence 975 666654 4679999999877777654 33 468899986 778887764 788899874
No 242
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.14 E-value=2.2e-09 Score=87.78 Aligned_cols=129 Identities=11% Similarity=0.172 Sum_probs=91.1
Q ss_pred EEEEEEeccCCCCcCCCCCcCCceeeccCCC-CCEE--EEEecCCeEEEEcCCCeEEEEeeccCCceEEEEEeecCCCce
Q 036314 4 LEIEYIKAVAPQKEEEPSLHDDWVSAVDGSN-PGFI--LTGCYDNLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKY 80 (347)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~l--~sg~~d~~i~iw~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~ 80 (347)
.+|=++.+...+.........+.|.++++++ +..| ++|..+..|++||..+..+..+. ...++.|.|+|.+.
T Consensus 39 ~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~~~~i~~~~--~~~~n~i~wsP~G~--- 113 (194)
T PF08662_consen 39 FELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVKGKKIFSFG--TQPRNTISWSPDGR--- 113 (194)
T ss_pred EEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEEEcCcccEeEeec--CCCceEEEECCCCC---
Confidence 4566665554444455555566799999885 4543 34557789999999876666554 46678999999553
Q ss_pred EEEEEccC---CCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeC------CCcEEEEecC
Q 036314 81 VTVATASK---DQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSW------DCTISLWRTN 149 (347)
Q Consensus 81 ~~l~s~s~---Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~------Dg~I~iwd~~ 149 (347)
+|++++. .|.|.+||+...+. +... .| ..++.++|+|||++++++.. |..++||+..
T Consensus 114 -~l~~~g~~n~~G~l~~wd~~~~~~---------i~~~-~~-~~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~ 179 (194)
T PF08662_consen 114 -FLVLAGFGNLNGDLEFWDVRKKKK---------ISTF-EH-SDATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQ 179 (194)
T ss_pred -EEEEEEccCCCcEEEEEECCCCEE---------eecc-cc-CcEEEEEEcCCCCEEEEEEeccceeccccEEEEEec
Confidence 6777654 46799999975432 2222 23 34788999999999998763 8899999875
No 243
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=99.14 E-value=6.9e-07 Score=80.22 Aligned_cols=285 Identities=12% Similarity=0.184 Sum_probs=160.9
Q ss_pred EEEEecC----CeEEEEcC--C-CeEE--EEeeccCCceEEEEEeecCCCceEEEEEccC----CCcEEEEecccccccc
Q 036314 38 ILTGCYD----NLGRVWKA--G-GVCT--HILEGHCGAVSSVNIIKSDGLKYVTVATASK----DQTLRLWKFDAEELVN 104 (347)
Q Consensus 38 l~sg~~d----~~i~iw~~--~-~~~~--~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~----Dg~v~~wd~~~~~~~~ 104 (347)
++.|++. +.|.+|+. . +... ..+. -......+.+++++. +|.+..+ ++.|..|++...+
T Consensus 2 ~~vgsy~~~~~~gI~~~~~d~~~g~l~~~~~~~-~~~~Ps~l~~~~~~~----~LY~~~e~~~~~g~v~~~~i~~~~--- 73 (345)
T PF10282_consen 2 LYVGSYTNGKGGGIYVFRFDEETGTLTLVQTVA-EGENPSWLAVSPDGR----RLYVVNEGSGDSGGVSSYRIDPDT--- 73 (345)
T ss_dssp EEEEECCSSSSTEEEEEEEETTTTEEEEEEEEE-ESSSECCEEE-TTSS----EEEEEETTSSTTTEEEEEEEETTT---
T ss_pred EEEEcCCCCCCCcEEEEEEcCCCCCceEeeeec-CCCCCceEEEEeCCC----EEEEEEccccCCCCEEEEEECCCc---
Confidence 4556666 57888865 2 3322 2222 223345677777543 4555544 6799999987531
Q ss_pred CccccceeeeeeccccceEEEEEeCCCCEEEEeeC-CCcEEEEecCCCCCCCccceeeeccCCCcccccccccccccccc
Q 036314 105 HPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSW-DCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLV 183 (347)
Q Consensus 105 ~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~-Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (347)
...+.+............+++++++++|+++.. +|+|.++++................+. .+. ..+.-.
T Consensus 74 --g~L~~~~~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~----g~~----~~rq~~ 143 (345)
T PF10282_consen 74 --GTLTLLNSVPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGS----GPN----PDRQEG 143 (345)
T ss_dssp --TEEEEEEEEEESSSCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEE----ESS----TTTTSS
T ss_pred --ceeEEeeeeccCCCCcEEEEEecCCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCC----CCc----cccccc
Confidence 111222333322333446889999999998875 899999998764221111100000000 000 000111
Q ss_pred CCccceEEEEe-CCCCeEEEEec-CCcEEEEECCCCc--eee----eeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEe
Q 036314 184 GHTQCVSSVVW-PQQETIYSASW-DHSVRTWDVEMGK--DLS----DIFCGKALNCIDIGGEGSALIAAGGSDPILRIWD 255 (347)
Q Consensus 184 ~h~~~v~~~~~-~~~~~l~s~s~-dg~v~vwd~~~~~--~~~----~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd 255 (347)
.| ..++.+ |++++++.... ...|.+|++.... ... .+..+.....+.|++++..+.++.-.++.|.+|+
T Consensus 144 ~h---~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~ 220 (345)
T PF10282_consen 144 PH---PHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFD 220 (345)
T ss_dssp TC---EEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEE
T ss_pred cc---ceeEEECCCCCEEEEEecCCCEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEe
Confidence 12 344555 67787765532 3469999986654 211 1223456778999888777778888899999999
Q ss_pred CCCC-CCCCCeEEecC------CCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCC--Ccc--ceeecCCCCeEEEEeec
Q 036314 256 PRKP-GTSAPVFQFSS------HNSWISACKWHNKSWFHLISASYDGKVMLWDLRT--AWP--LSVIDSHKDKVLCADWW 324 (347)
Q Consensus 256 ~~~~-~~~~~~~~~~~------h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~--~~~--~~~~~~h~~~v~~~~~~ 324 (347)
+... +....+..+.. .......++++|++.++.++-..+.+|-+|+++. +.. +..+.......+.+.++
T Consensus 221 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s 300 (345)
T PF10282_consen 221 YDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTGGKFPRHFAFS 300 (345)
T ss_dssp EETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-
T ss_pred ecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCCCCCccEEEEe
Confidence 8722 11112222221 1125778999999988777777889999999943 322 22332223347889997
Q ss_pred C-CCEEEEcc-CCceEEEeec
Q 036314 325 R-GDSVISGG-VDSKLCVSSG 343 (347)
Q Consensus 325 ~-~~~l~s~s-~D~~v~vw~~ 343 (347)
+ |++|+.+. .+++|.+++-
T Consensus 301 ~~g~~l~Va~~~s~~v~vf~~ 321 (345)
T PF10282_consen 301 PDGRYLYVANQDSNTVSVFDI 321 (345)
T ss_dssp TTSSEEEEEETTTTEEEEEEE
T ss_pred CCCCEEEEEecCCCeEEEEEE
Confidence 4 77766554 6788988864
No 244
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.13 E-value=3.5e-08 Score=88.82 Aligned_cols=193 Identities=12% Similarity=0.105 Sum_probs=123.4
Q ss_pred EEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceee
Q 036314 82 TVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIK 161 (347)
Q Consensus 82 ~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~ 161 (347)
.+++-..+++|.+.|..+.+ .+..+......-..+.|++||++++..+.||.|.++|+.+.+.
T Consensus 8 ~~V~~~~~~~v~viD~~t~~---------~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~-------- 70 (369)
T PF02239_consen 8 FYVVERGSGSVAVIDGATNK---------VVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKV-------- 70 (369)
T ss_dssp EEEEEGGGTEEEEEETTT-S---------EEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSE--------
T ss_pred EEEEecCCCEEEEEECCCCe---------EEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccE--------
Confidence 45677888999999987654 3445554444334567999999999999999999999986532
Q ss_pred eccCCCccccccccccccccccCCccceEEEEe-CCCCeEEEE-ecCCcEEEEECCCCceeeeeeeCe--------eeEE
Q 036314 162 KRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSA-SWDHSVRTWDVEMGKDLSDIFCGK--------ALNC 231 (347)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~-s~dg~v~vwd~~~~~~~~~~~~~~--------~~~~ 231 (347)
+.++.... ...++++ +++++++.+ ..++.+.++|.++.+.++.+.... .+..
T Consensus 71 -----------------v~~i~~G~-~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~a 132 (369)
T PF02239_consen 71 -----------------VATIKVGG-NPRGIAVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAA 132 (369)
T ss_dssp -----------------EEEEE-SS-EEEEEEE--TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEE
T ss_pred -----------------EEEEecCC-CcceEEEcCCCCEEEEEecCCCceeEeccccccceeecccccccccccCCCcee
Confidence 22222222 2345665 578887655 568999999999998888775432 2334
Q ss_pred EEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceee
Q 036314 232 IDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVI 311 (347)
Q Consensus 232 ~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~ 311 (347)
+..++....++++--+.+.|.+.|...... . ....-..........|+|++++++++...+..|-++|.++++.+..+
T Consensus 133 Iv~s~~~~~fVv~lkd~~~I~vVdy~d~~~-~-~~~~i~~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~~~k~v~~i 210 (369)
T PF02239_consen 133 IVASPGRPEFVVNLKDTGEIWVVDYSDPKN-L-KVTTIKVGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTKTGKLVALI 210 (369)
T ss_dssp EEE-SSSSEEEEEETTTTEEEEEETTTSSC-E-EEEEEE--TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTTTEEEEEE
T ss_pred EEecCCCCEEEEEEccCCeEEEEEeccccc-c-ceeeecccccccccccCcccceeeecccccceeEEEeeccceEEEEe
Confidence 444455554666666668888888765422 1 22222344566788999999887787778889999999987665544
No 245
>KOG0309 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.12 E-value=3.5e-10 Score=104.02 Aligned_cols=240 Identities=20% Similarity=0.298 Sum_probs=160.2
Q ss_pred CceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccc--eEEEEEeCCC---CEEEEeeC
Q 036314 65 GAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKAS--VHSIAAETSG---NMVCSGSW 139 (347)
Q Consensus 65 ~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~--V~~v~~s~~~---~~l~sgs~ 139 (347)
+.+.++.+.|.+. -+|.++.-| +.+-|+... ..+++-+. |..+ |..+.|++.. .++++-+.
T Consensus 25 ~~~~a~si~p~gr----di~lAsr~g-l~i~dld~p-----~~ppr~l~----h~tpw~vad~qws~h~a~~~wiVsts~ 90 (1081)
T KOG0309|consen 25 GGFNAVSINPSGR----DIVLASRQG-LYIIDLDDP-----FTPPRWLH----HITPWQVADVQWSPHPAKPYWIVSTSN 90 (1081)
T ss_pred Ccccceeeccccc----hhhhhhhcC-eEEEeccCC-----CCCceeee----ccCcchhcceecccCCCCceeEEecCc
Confidence 3467777777543 256666655 334455421 12222222 3222 4455665543 24555444
Q ss_pred CCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeCC--CCeEEEEecCCcEEEEECCCC
Q 036314 140 DCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQ--QETIYSASWDHSVRTWDVEMG 217 (347)
Q Consensus 140 Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~--~~~l~s~s~dg~v~vwd~~~~ 217 (347)
..+ .+|++..... ...-..+-+|+.+|..+-|.. ...+++++.|-.+..||+++.
T Consensus 91 qka-iiwnlA~ss~----------------------~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp 147 (1081)
T KOG0309|consen 91 QKA-IIWNLAKSSS----------------------NAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSP 147 (1081)
T ss_pred chh-hhhhhhcCCc----------------------cceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCC
Confidence 444 4788764321 111235668999999998843 346899999999999999986
Q ss_pred ceeeeee--eCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCC
Q 036314 218 KDLSDIF--CGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDG 295 (347)
Q Consensus 218 ~~~~~~~--~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~ 295 (347)
....... -......+.+...+++.+|+ +..+.|++||++.+. .++..+.+|...|..++|+.-....+.+++.|+
T Consensus 148 ~~p~ys~~~w~s~asqVkwnyk~p~vlas-shg~~i~vwd~r~gs--~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~ 224 (1081)
T KOG0309|consen 148 HRPFYSTSSWRSAASQVKWNYKDPNVLAS-SHGNDIFVWDLRKGS--TPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDG 224 (1081)
T ss_pred CcceeeeecccccCceeeecccCcchhhh-ccCCceEEEeccCCC--cceEEecccceeeehHHHhhhhhhhhcccCCCC
Confidence 5432221 12344567777667766654 557889999999764 458889999999999999877666799999999
Q ss_pred cEEEEEcCCCc-------------------------------------------------------cceeecCCCCeEEE
Q 036314 296 KVMLWDLRTAW-------------------------------------------------------PLSVIDSHKDKVLC 320 (347)
Q Consensus 296 ~i~lwd~~~~~-------------------------------------------------------~~~~~~~h~~~v~~ 320 (347)
+|+.||..+.. ++.+|.||.+.|..
T Consensus 225 tvkfw~y~kSt~e~~~~vtt~~piw~~r~~Pfg~g~~~mp~~G~n~v~~~~c~n~d~e~n~~~~~~pVh~F~GH~D~V~e 304 (1081)
T KOG0309|consen 225 TVKFWDYSKSTTESKRTVTTNFPIWRGRYLPFGEGYCIMPMVGGNMVPQLRCENSDLEWNVFDLNTPVHTFVGHDDVVLE 304 (1081)
T ss_pred ceeeecccccccccceeccccCcceeccccccCceeEeccccCCeeeeeccccchhhhhccccCCcceeeecCcchHHHH
Confidence 99999865321 35667899999988
Q ss_pred Eeec-----CC------CEEEEccCCceEEEeecc
Q 036314 321 ADWW-----RG------DSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 321 ~~~~-----~~------~~l~s~s~D~~v~vw~~~ 344 (347)
..|. +| -+|+|=|.|.++++|..-
T Consensus 305 FlWR~r~e~~~d~d~rdfQLVTWSkD~~lrlWpI~ 339 (1081)
T KOG0309|consen 305 FLWRKRKECDGDYDSRDFQLVTWSKDQTLRLWPID 339 (1081)
T ss_pred HhhhhcccccCCCCccceeEEEeecCCceEeeecc
Confidence 8883 11 259999999999999864
No 246
>KOG4190 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.12 E-value=8.8e-10 Score=98.46 Aligned_cols=283 Identities=11% Similarity=0.165 Sum_probs=165.6
Q ss_pred CCCcCCceeecc-CCCCCEEEEEecCCeEEEEcCC--------CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCC
Q 036314 20 PSLHDDWVSAVD-GSNPGFILTGCYDNLGRVWKAG--------GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQ 90 (347)
Q Consensus 20 ~~~h~~~v~~~~-~~~~~~l~sg~~d~~i~iw~~~--------~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg 90 (347)
..||...|++++ .++.+.++++|.|.|+++|.+. ..|..++..|..+|.++.|..+.. . .+|.||
T Consensus 731 f~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr----~--i~ScD~ 804 (1034)
T KOG4190|consen 731 FTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLR----S--IASCDG 804 (1034)
T ss_pred ccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccc----e--eeeccC
Confidence 568999999988 4577889999999999999652 247788999999999999987432 3 357889
Q ss_pred cEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEE-EEeeCCCcEEEEecCCCCCCCccceeeeccCCCcc
Q 036314 91 TLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMV-CSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQV 169 (347)
Q Consensus 91 ~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l-~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~ 169 (347)
-|.+||.--++++.+.... + -.+-...|.++- +-+...+ +-++...||+++|.+..+...+-.
T Consensus 805 giHlWDPFigr~Laq~~da-p---k~~a~~~ikcl~-nv~~~iliAgcsaeSTVKl~DaRsce~~~E~k----------- 868 (1034)
T KOG4190|consen 805 GIHLWDPFIGRLLAQMEDA-P---KEGAGGNIKCLE-NVDRHILIAGCSAESTVKLFDARSCEWTCELK----------- 868 (1034)
T ss_pred cceeecccccchhHhhhcC-c---ccCCCceeEecc-cCcchheeeeccchhhheeeecccccceeeEE-----------
Confidence 9999998766654321100 0 011223344442 2133444 444899999999987543211100
Q ss_pred ccccccccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCC
Q 036314 170 EEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSD 248 (347)
Q Consensus 170 ~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d 248 (347)
+....+.+.-+++++. +.|+.++.+-.+|.|.+.|.++|+.+..+..-. ..-+.+..+..+.++....|
T Consensus 869 ---------Vcna~~Pna~~R~iaVa~~GN~lAa~LSnGci~~LDaR~G~vINswrpme-cdllqlaapsdq~L~~sald 938 (1034)
T KOG4190|consen 869 ---------VCNAPGPNALTRAIAVADKGNKLAAALSNGCIAILDARNGKVINSWRPME-CDLLQLAAPSDQALAQSALD 938 (1034)
T ss_pred ---------eccCCCCchheeEEEeccCcchhhHHhcCCcEEEEecCCCceeccCCccc-chhhhhcCchhHHHHhhccc
Confidence 1111334455777776 567889999899999999999999887664221 11122222333455666667
Q ss_pred CcEEE-EeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCC-cc---ceee--cCCCCeEEEE
Q 036314 249 PILRI-WDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTA-WP---LSVI--DSHKDKVLCA 321 (347)
Q Consensus 249 ~~i~i-wd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~-~~---~~~~--~~h~~~v~~~ 321 (347)
.++.+ |..-.+ ....+......... -...-|+ .|+++.....+.+|--... .. +..+ ....+..+++
T Consensus 939 HslaVnWhaldg---imh~q~kpppepah--flqsvgp-SLV~a~~Gn~lgVYad~a~~ha~stitKiR~d~f~G~lTal 1012 (1034)
T KOG4190|consen 939 HSLAVNWHALDG---IMHLQDKPPPEPAH--FLQSVGP-SLVTAQNGNILGVYADSAELHAESTITKIRPDEFPGTLTAL 1012 (1034)
T ss_pred ceeEeeehhcCC---eeeeccCCCCcchh--hhhccCc-eeEEeccCcEEEEEecchhhhhhhhhccccccccCCcccee
Confidence 77777 753211 11111111111000 0001232 4888888888888842211 11 1111 1234455555
Q ss_pred eecCC-CEEEEccCCceEEE
Q 036314 322 DWWRG-DSVISGGVDSKLCV 340 (347)
Q Consensus 322 ~~~~~-~~l~s~s~D~~v~v 340 (347)
+--|- .-+..|+..|.|.+
T Consensus 1013 a~LPLN~afLaGne~G~IaL 1032 (1034)
T KOG4190|consen 1013 APLPLNCAFLAGNEHGAIAL 1032 (1034)
T ss_pred eeccccchhhccCCCCceee
Confidence 54443 34667777887765
No 247
>KOG2321 consensus WD40 repeat protein [General function prediction only]
Probab=99.11 E-value=1.3e-08 Score=91.41 Aligned_cols=236 Identities=19% Similarity=0.273 Sum_probs=146.2
Q ss_pred ccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeecccc--ceEEEEEeCCCCEEEEeeC
Q 036314 62 GHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKA--SVHSIAAETSGNMVCSGSW 139 (347)
Q Consensus 62 ~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~--~V~~v~~s~~~~~l~sgs~ 139 (347)
+|...-+.|..+|++. ..||||-.--.|++||+..-.+ .|.-|.+ .|.-.-.+.|-.-++---.
T Consensus 49 e~p~ast~ik~s~DGq---Y~lAtG~YKP~ikvydlanLSL-----------KFERhlDae~V~feiLsDD~SK~v~L~~ 114 (703)
T KOG2321|consen 49 EMPTASTRIKVSPDGQ---YLLATGTYKPQIKVYDLANLSL-----------KFERHLDAEVVDFEILSDDYSKSVFLQN 114 (703)
T ss_pred CCccccceeEecCCCc---EEEEecccCCceEEEEccccee-----------eeeecccccceeEEEeccchhhheEeec
Confidence 3556667888888654 3789999999999999875321 2344432 2333334555433333345
Q ss_pred CCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeC-CCCeEEEEecCCcEEEEECCCCc
Q 036314 140 DCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP-QQETIYSASWDHSVRTWDVEMGK 218 (347)
Q Consensus 140 Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~l~s~s~dg~v~vwd~~~~~ 218 (347)
|.+|-+-... +.+.. ++.. ..-+.+.++ ..--|++++....|.-++++.|.
T Consensus 115 DR~IefHak~-----G~hy~-------------------~RIP----~~GRDm~y~~~scDly~~gsg~evYRlNLEqGr 166 (703)
T KOG2321|consen 115 DRTIEFHAKY-----GRHYR-------------------TRIP----KFGRDMKYHKPSCDLYLVGSGSEVYRLNLEQGR 166 (703)
T ss_pred Cceeeehhhc-----Ceeee-------------------eecC----cCCccccccCCCccEEEeecCcceEEEEccccc
Confidence 5555543110 00000 0000 011223321 22235566666678888999998
Q ss_pred eeeeeeeC-eeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCe---EEecCCCC-----CeeEEEeCCCCCeEEE
Q 036314 219 DLSDIFCG-KALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPV---FQFSSHNS-----WISACKWHNKSWFHLI 289 (347)
Q Consensus 219 ~~~~~~~~-~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~---~~~~~h~~-----~v~~v~~s~~~~~~l~ 289 (347)
-+..+... ..++++.+.+..+ +|++|+.+|.|.+||+|.......+ ..+..|.. .|+++.|+.+| ..++
T Consensus 167 fL~P~~~~~~~lN~v~in~~hg-Lla~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~g-L~~a 244 (703)
T KOG2321|consen 167 FLNPFETDSGELNVVSINEEHG-LLACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDG-LHVA 244 (703)
T ss_pred cccccccccccceeeeecCccc-eEEecccCceEEEecchhhhhheeeecccccCCCccccccCcceEEEecCCc-eeEE
Confidence 77776544 5788888876654 8899999999999999864322111 11122333 38999999876 6799
Q ss_pred EEeCCCcEEEEEcCCCccceeecCCC--CeEEEEeecC---CCEEEEccCCceEEEeec
Q 036314 290 SASYDGKVMLWDLRTAWPLSVIDSHK--DKVLCADWWR---GDSVISGGVDSKLCVSSG 343 (347)
Q Consensus 290 s~s~D~~i~lwd~~~~~~~~~~~~h~--~~v~~~~~~~---~~~l~s~s~D~~v~vw~~ 343 (347)
.|..+|.|.|||++..+++.. ..|. -++..+.|-+ ++.++|. .-..++||+-
T Consensus 245 VGts~G~v~iyDLRa~~pl~~-kdh~~e~pi~~l~~~~~~~q~~v~S~-Dk~~~kiWd~ 301 (703)
T KOG2321|consen 245 VGTSTGSVLIYDLRASKPLLV-KDHGYELPIKKLDWQDTDQQNKVVSM-DKRILKIWDE 301 (703)
T ss_pred eeccCCcEEEEEcccCCceee-cccCCccceeeecccccCCCceEEec-chHHhhhccc
Confidence 999999999999999877654 3454 4667888853 2356653 3567888873
No 248
>KOG4547 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.11 E-value=3.4e-09 Score=95.36 Aligned_cols=198 Identities=15% Similarity=0.091 Sum_probs=132.5
Q ss_pred eCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccC-----CccceEEEEe-----CCC
Q 036314 128 ETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVG-----HTQCVSSVVW-----PQQ 197 (347)
Q Consensus 128 s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----h~~~v~~~~~-----~~~ 197 (347)
+|-+.++|....||.+|+|+.............. ...+++..+.-+ -.....++.+ .+.
T Consensus 2 ~~~~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~-----------~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t 70 (541)
T KOG4547|consen 2 PPALDYFALSTGDGRLRIWDTAKNQLQQEFAPIA-----------SLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDT 70 (541)
T ss_pred CchhheEeecCCCCeEEEEEccCceeeeeeccch-----------hccCcceeEEEEEEeccchHHHHhHHHHhhccCCc
Confidence 3446789999999999999987653221111000 001111110000 0000111111 123
Q ss_pred CeEEEEecCCcEEEEECCCCceeeeeee---CeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCC
Q 036314 198 ETIYSASWDHSVRTWDVEMGKDLSDIFC---GKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSW 274 (347)
Q Consensus 198 ~~l~s~s~dg~v~vwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~ 274 (347)
..++-|...|.|.+|++..++....+.. ...+.++..+ .+...|-+++.|..+..|+... ......+......
T Consensus 71 ~~lvlgt~~g~v~~ys~~~g~it~~~st~~h~~~v~~~~~~-~~~~ciyS~~ad~~v~~~~~~~---~~~~~~~~~~~~~ 146 (541)
T KOG4547|consen 71 SMLVLGTPQGSVLLYSVAGGEITAKLSTDKHYGNVNEILDA-QRLGCIYSVGADLKVVYILEKE---KVIIRIWKEQKPL 146 (541)
T ss_pred eEEEeecCCccEEEEEecCCeEEEEEecCCCCCcceeeecc-cccCceEecCCceeEEEEeccc---ceeeeeeccCCCc
Confidence 3577888899999999998887666652 2356666653 4455788999999999999764 2235566777778
Q ss_pred eeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeec-C-----CCE-EEEccCCceEEEeec
Q 036314 275 ISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWW-R-----GDS-VISGGVDSKLCVSSG 343 (347)
Q Consensus 275 v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~-~-----~~~-l~s~s~D~~v~vw~~ 343 (347)
+.++..+||+. .|++|+ ++|++||+++.+.+.+|.||.++|+++.|- . |.+ |.+...+.-+.+|-.
T Consensus 147 ~~sl~is~D~~-~l~~as--~~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v 219 (541)
T KOG4547|consen 147 VSSLCISPDGK-ILLTAS--RQIKVLDIETKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVV 219 (541)
T ss_pred cceEEEcCCCC-EEEecc--ceEEEEEccCceEEEEecCCCcceEEEEEEEeccccccceeeeccccccceeEEEE
Confidence 89999999975 577776 489999999999999999999999999994 2 565 555566777777743
No 249
>KOG1064 consensus RAVE (regulator of V-ATPase assembly) complex subunit RAV1/DMX protein, WD repeat superfamily [General function prediction only]
Probab=99.11 E-value=1.2e-09 Score=109.19 Aligned_cols=246 Identities=17% Similarity=0.247 Sum_probs=155.1
Q ss_pred EEEEEecCCeEEEEcCCCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeee
Q 036314 37 FILTGCYDNLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILR 116 (347)
Q Consensus 37 ~l~sg~~d~~i~iw~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~ 116 (347)
.+.....+++.--|..++.- ..+..|-..|.++.-+|... ..+||+.||.|++|....++. ..+.++.
T Consensus 2182 ~~~~~n~~~~~~tq~~~~~~-~~~k~~v~~v~r~~sHp~~~----~Yltgs~dgsv~~~~w~~~~~------v~~~rt~- 2249 (2439)
T KOG1064|consen 2182 RFTPSNLPWLGSTQTSRGAS-VMIKHPVENVRRMTSHPSDP----YYLTGSQDGSVRMFEWGHGQQ------VVCFRTA- 2249 (2439)
T ss_pred cCCcccCCccccceecccce-eEeecccCceeeecCCCCCc----eEEecCCCceEEEEeccCCCe------EEEeecc-
Confidence 33444445555555544322 23444556677777777443 568999999999999765431 1122222
Q ss_pred ccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeCC
Q 036314 117 GHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQ 196 (347)
Q Consensus 117 ~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 196 (347)
|. +.|+.+.|+.+|+.+..+..||.+.+|.+.. ......+.|+.....+.|-.
T Consensus 2250 g~-s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~p--------------------------k~~~s~qchnk~~~Df~Fi~ 2302 (2439)
T KOG1064|consen 2250 GN-SRVTRSRFNHQGNKFGIVDGDGDLSLWQASP--------------------------KPYTSWQCHNKALSDFRFIG 2302 (2439)
T ss_pred Cc-chhhhhhhcccCCceeeeccCCceeecccCC--------------------------cceeccccCCccccceeeee
Confidence 33 7788999999999999999999999997652 12334566777777666532
Q ss_pred CCeEEEE---ecCCcEEEEECCCCce--eeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCC
Q 036314 197 QETIYSA---SWDHSVRTWDVEMGKD--LSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSH 271 (347)
Q Consensus 197 ~~~l~s~---s~dg~v~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h 271 (347)
..++++ +.++.+.+||..-.-. ....-+....+++++.|. .+++++|+.+|.|++||++... .+.++..
T Consensus 2303 -s~~~tag~s~d~~n~~lwDtl~~~~~s~v~~~H~~gaT~l~~~P~-~qllisggr~G~v~l~D~rqrq---l~h~~~~- 2376 (2439)
T KOG1064|consen 2303 -SLLATAGRSSDNRNVCLWDTLLPPMNSLVHTCHDGGATVLAYAPK-HQLLISGGRKGEVCLFDIRQRQ---LRHTFQA- 2376 (2439)
T ss_pred -hhhhccccCCCCCcccchhcccCcccceeeeecCCCceEEEEcCc-ceEEEecCCcCcEEEeehHHHH---HHHHhhh-
Confidence 233333 5667899999754321 111223456788888654 5688999999999999998521 2223322
Q ss_pred CCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeec---CCCCe--EEEEee--cCCCEEEEccCCce
Q 036314 272 NSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVID---SHKDK--VLCADW--WRGDSVISGGVDSK 337 (347)
Q Consensus 272 ~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~---~h~~~--v~~~~~--~~~~~l~s~s~D~~ 337 (347)
+. .+.++++|+..|.|+||++.....++++. .|.+- +..... -..++|.+|+.|++
T Consensus 2377 --------~~--~~~~f~~~ss~g~ikIw~~s~~~ll~~~p~e~ak~gfFr~~g~Q~~v~~~nrifsCgad~~ 2439 (2439)
T KOG1064|consen 2377 --------LD--TREYFVTGSSEGNIKIWRLSEFGLLHTFPSEHAKQGFFRNIGMQINVGQCNRIFSCGADGT 2439 (2439)
T ss_pred --------hh--hhheeeccCcccceEEEEccccchhhcCchhhcccchhhhcCceeeeccCceEEEecCCCC
Confidence 22 23469999999999999998876665542 12211 111111 13557888888874
No 250
>KOG2394 consensus WD40 protein DMR-N9 [General function prediction only]
Probab=99.11 E-value=1e-09 Score=97.56 Aligned_cols=147 Identities=21% Similarity=0.257 Sum_probs=105.5
Q ss_pred CCCeEEEEecCCcEEEEECCCCceeeeee------eCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCC--C------
Q 036314 196 QQETIYSASWDHSVRTWDVEMGKDLSDIF------CGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPG--T------ 261 (347)
Q Consensus 196 ~~~~l~s~s~dg~v~vwd~~~~~~~~~~~------~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~--~------ 261 (347)
.+-.++.+=.-|.+.+.|... +.+..+. ....++|+.|-+.+..+++++..+|.+++||..... .
T Consensus 184 ~g~dllIGf~tGqvq~idp~~-~~~sklfne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~ 262 (636)
T KOG2394|consen 184 KGLDLLIGFTTGQVQLIDPIN-FEVSKLFNEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQA 262 (636)
T ss_pred CCcceEEeeccCceEEecchh-hHHHHhhhhcccccccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcccc
Confidence 344466666677888887654 2232221 234688999988888888888999999999753210 0
Q ss_pred -----------------CCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeec
Q 036314 262 -----------------SAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWW 324 (347)
Q Consensus 262 -----------------~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~ 324 (347)
-.|+..+.--.+.|...+|+||+. +||+.|.||.+||+|..+.+.+..+..=-+..+||.||
T Consensus 263 ~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~FS~DG~-~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWS 341 (636)
T KOG2394|consen 263 LKDGDQFAILTSKSKKTRNPVARWHIGEGSINEFAFSPDGK-YLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWS 341 (636)
T ss_pred cCCCCeeEEeeeeccccCCccceeEeccccccceeEcCCCc-eEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEEc
Confidence 011222323344688899999885 69999999999999999876665543333678999998
Q ss_pred C-CCEEEEccCCceEEEeecc
Q 036314 325 R-GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 325 ~-~~~l~s~s~D~~v~vw~~~ 344 (347)
| |++|++|+.|.-|.||+..
T Consensus 342 PDGKyIvtGGEDDLVtVwSf~ 362 (636)
T KOG2394|consen 342 PDGKYIVTGGEDDLVTVWSFE 362 (636)
T ss_pred CCccEEEecCCcceEEEEEec
Confidence 5 8899999999999999864
No 251
>KOG0280 consensus Uncharacterized conserved protein [Amino acid transport and metabolism]
Probab=99.11 E-value=2.3e-08 Score=82.91 Aligned_cols=132 Identities=17% Similarity=0.065 Sum_probs=93.7
Q ss_pred EEeC-CCCeEEEEecCCcEEEEECCCCceee--eeeeC-eeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEE
Q 036314 192 VVWP-QQETIYSASWDHSVRTWDVEMGKDLS--DIFCG-KALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQ 267 (347)
Q Consensus 192 ~~~~-~~~~l~s~s~dg~v~vwd~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~ 267 (347)
+-|. .+..++++-.+|.+.+-+.......+ .+..+ .+.....|+..+.+++.+|++|+.+..||+|.++.. ....
T Consensus 127 lD~~~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~-i~~n 205 (339)
T KOG0280|consen 127 LDISTSGTKIFVSDSRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTF-IWHN 205 (339)
T ss_pred EEeeccCceEEEEcCCCcEEEEecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcce-eeec
Confidence 4453 45568888888888854433322211 23222 355667777777789999999999999999954421 1222
Q ss_pred ecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCC-CccceeecCCCCeEEEEeecC
Q 036314 268 FSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRT-AWPLSVIDSHKDKVLCADWWR 325 (347)
Q Consensus 268 ~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~-~~~~~~~~~h~~~v~~~~~~~ 325 (347)
-.-|...|.++.-+|..++.++||++|..|++||.|. ++++..-. -.+.||.+.++|
T Consensus 206 ~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~~~~-v~GGVWRi~~~p 263 (339)
T KOG0280|consen 206 SKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPLFKAK-VGGGVWRIKHHP 263 (339)
T ss_pred ceeeecceEEEecCCCCCceEEEeccccceeeeehhcccCccccCc-cccceEEEEecc
Confidence 4568899999999998888999999999999999995 56665422 247889888876
No 252
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=99.08 E-value=6.2e-09 Score=86.93 Aligned_cols=282 Identities=19% Similarity=0.282 Sum_probs=160.1
Q ss_pred CCcCCceeeccCC-CCCEEEEEecCCeEEEEcCC---C---eEEEEeeccCC------------ceEEEEEeecCCCceE
Q 036314 21 SLHDDWVSAVDGS-NPGFILTGCYDNLGRVWKAG---G---VCTHILEGHCG------------AVSSVNIIKSDGLKYV 81 (347)
Q Consensus 21 ~~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~---~---~~~~~l~~h~~------------~V~~v~~~~~~~~~~~ 81 (347)
....+-|++|.|. .|.||+||...|.|-++... | +....|++|+. .|+.+.|..+.+. .+
T Consensus 23 ~tead~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r-~h 101 (460)
T COG5170 23 STEADKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGR-NH 101 (460)
T ss_pred ccccceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCc-ce
Confidence 3456889999998 56799999888999999642 2 12234667753 5888888876553 33
Q ss_pred EEEEccCCCcEEEEecccccc--ccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccce
Q 036314 82 TVATASKDQTLRLWKFDAEEL--VNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVS 159 (347)
Q Consensus 82 ~l~s~s~Dg~v~~wd~~~~~~--~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~ 159 (347)
++..+.|.+|++|.+....+ +.+..-...+ + .+-.+++++. ..+++=.+... ...
T Consensus 102 -FLlstNdktiKlWKiyeknlk~va~nnls~~~-~-~~~~g~~~s~---------------~~l~lprls~h---d~i-- 158 (460)
T COG5170 102 -FLLSTNDKTIKLWKIYEKNLKVVAENNLSDSF-H-SPMGGPLTST---------------KELLLPRLSEH---DEI-- 158 (460)
T ss_pred -EEEecCCceeeeeeeecccchhhhcccccccc-c-cccCCCcCCH---------------HHhhccccccc---ceE--
Confidence 44568899999999864321 1000000000 0 0001111111 00111000000 000
Q ss_pred eeeccCCCccccccccccccccc-cCCccceEEEEeCC-CCeEEEEecCCcEEEEECCCCceee---eeeeC------ee
Q 036314 160 IKKRKGNNQVEEPQLEGEAISTL-VGHTQCVSSVVWPQ-QETIYSASWDHSVRTWDVEMGKDLS---DIFCG------KA 228 (347)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~-~~~l~s~s~dg~v~vwd~~~~~~~~---~~~~~------~~ 228 (347)
...++.+.+ ..|.-.+.++.+.. .+.++| +.|=.|.+|++.-...-. .+... ..
T Consensus 159 --------------iaa~p~rvyaNaH~yhiNSiS~NsD~et~lS-aDdLrINLWnl~i~D~sFnIVDiKP~nmeeLteV 223 (460)
T COG5170 159 --------------IAAKPCRVYANAHPYHINSISFNSDKETLLS-ADDLRINLWNLEIIDGSFNIVDIKPHNMEELTEV 223 (460)
T ss_pred --------------EEeccceeccccceeEeeeeeecCchheeee-ccceeeeeccccccCCceEEEeccCccHHHHHHH
Confidence 000111122 34666788888854 445554 567789999986433222 22211 13
Q ss_pred eEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCC---CCCeE----------EecCCCCCeeEEEeCCCCCeEEEEEeCCC
Q 036314 229 LNCIDIGGEGSALIAAGGSDPILRIWDPRKPGT---SAPVF----------QFSSHNSWISACKWHNKSWFHLISASYDG 295 (347)
Q Consensus 229 ~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~---~~~~~----------~~~~h~~~v~~v~~s~~~~~~l~s~s~D~ 295 (347)
++...|+|...+++.-.+..|.|++-|+|+..- +..++ -+.+-.+.|..+.|++.|++ +++-+. -
T Consensus 224 ItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngry-IlsRdy-l 301 (460)
T COG5170 224 ITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRY-ILSRDY-L 301 (460)
T ss_pred HhhcccCHhHcceEEEecCCCcEEehhhhhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcE-EEEecc-c
Confidence 455667777777777778899999999984211 00111 11223346788999999864 665554 5
Q ss_pred cEEEEEcCCC-ccceeecC------------CCCeEE---EEeec-CCCEEEEccCCceEEEeec
Q 036314 296 KVMLWDLRTA-WPLSVIDS------------HKDKVL---CADWW-RGDSVISGGVDSKLCVSSG 343 (347)
Q Consensus 296 ~i~lwd~~~~-~~~~~~~~------------h~~~v~---~~~~~-~~~~l~s~s~D~~v~vw~~ 343 (347)
+++|||++.. .+++++.. ..+.|. .+.|+ +++.+.+||....--++-+
T Consensus 302 tvkiwDvnm~k~pikTi~~h~~l~~~l~d~YEnDaifdkFeisfSgd~~~v~sgsy~NNfgiyp~ 366 (460)
T COG5170 302 TVKIWDVNMAKNPIKTIPMHCDLMDELNDVYENDAIFDKFEISFSGDDKHVLSGSYSNNFGIYPT 366 (460)
T ss_pred eEEEEecccccCCceeechHHHHHHHHHhhhhccceeeeEEEEecCCcccccccccccceeeecc
Confidence 8999999853 45665532 234453 45666 4567888888877766653
No 253
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.08 E-value=4.8e-08 Score=90.25 Aligned_cols=197 Identities=11% Similarity=0.075 Sum_probs=111.3
Q ss_pred CCCcCCceeeccCC-CCCEEEEEecC---CeEEEEcCCCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCC--cEE
Q 036314 20 PSLHDDWVSAVDGS-NPGFILTGCYD---NLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQ--TLR 93 (347)
Q Consensus 20 ~~~h~~~v~~~~~~-~~~~l~sg~~d---~~i~iw~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg--~v~ 93 (347)
...+...+...+++ ++++|+.++.+ .+|++||+.+.....+..+.+.+.++.|+|++. ..+++.+.++ .|.
T Consensus 185 l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~spDg~---~l~~~~~~~~~~~i~ 261 (417)
T TIGR02800 185 ITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREKVASFPGMNGAPAFSPDGS---KLAVSLSKDGNPDIY 261 (417)
T ss_pred eecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEEeecCCCCccceEECCCCC---EEEEEECCCCCccEE
Confidence 33455667777888 45678776654 479999976433334455666677889998543 2344555555 577
Q ss_pred EEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEee-CCCc--EEEEecCCCCCCCccceeeeccCCCccc
Q 036314 94 LWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGS-WDCT--ISLWRTNDSDAAGNQVSIKKRKGNNQVE 170 (347)
Q Consensus 94 ~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs-~Dg~--I~iwd~~~~~~~~~~~~~~~~~~~~~~~ 170 (347)
+|++.+++. ..+..|........|++||+.|+..+ .++. |.++++....
T Consensus 262 ~~d~~~~~~----------~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~------------------ 313 (417)
T TIGR02800 262 VMDLDGKQL----------TRLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGE------------------ 313 (417)
T ss_pred EEECCCCCE----------EECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCC------------------
Confidence 788765431 22333444455678999998876554 3444 5555554321
Q ss_pred cccccccccccccCCccceEEEEe-CCCCeEEEEecCC---cEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEec
Q 036314 171 EPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDH---SVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGG 246 (347)
Q Consensus 171 ~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg---~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~ 246 (347)
...+..+...+....| ++++.++.++.++ .|.+||+.++.. ..+..........+++++..++++..
T Consensus 314 --------~~~l~~~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~p~~spdg~~l~~~~~ 384 (417)
T TIGR02800 314 --------VRRLTFRGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGE-RVLTDTGLDESPSFAPNGRMILYATT 384 (417)
T ss_pred --------EEEeecCCCCccCeEECCCCCEEEEEEccCCceEEEEEeCCCCCe-EEccCCCCCCCceECCCCCEEEEEEe
Confidence 0111112233444555 5778887777765 788899877543 22222212233456666554444443
Q ss_pred CCC--cEEEEeC
Q 036314 247 SDP--ILRIWDP 256 (347)
Q Consensus 247 ~d~--~i~iwd~ 256 (347)
.++ .+++.+.
T Consensus 385 ~~~~~~l~~~~~ 396 (417)
T TIGR02800 385 RGGRGVLGLVST 396 (417)
T ss_pred CCCcEEEEEEEC
Confidence 332 3445553
No 254
>KOG0309 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.07 E-value=8.9e-10 Score=101.44 Aligned_cols=234 Identities=19% Similarity=0.316 Sum_probs=148.8
Q ss_pred CCEEEEEecCCeEEEEcCC----CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccc
Q 036314 35 PGFILTGCYDNLGRVWKAG----GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIR 110 (347)
Q Consensus 35 ~~~l~sg~~d~~i~iw~~~----~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~ 110 (347)
+..+|+.+. ....+|++. ......+.||...|+.+.|.+... ..+++++.|-.|..||+.+.. .
T Consensus 82 ~~wiVsts~-qkaiiwnlA~ss~~aIef~lhghsraitd~n~~~q~p---dVlatcsvdt~vh~wd~rSp~--------~ 149 (1081)
T KOG0309|consen 82 PYWIVSTSN-QKAIIWNLAKSSSNAIEFVLHGHSRAITDINFNPQHP---DVLATCSVDTYVHAWDMRSPH--------R 149 (1081)
T ss_pred ceeEEecCc-chhhhhhhhcCCccceEEEEecCccceeccccCCCCC---cceeeccccccceeeeccCCC--------c
Confidence 345665543 455689863 234567889999999999987544 479999999999999987532 2
Q ss_pred eeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceE
Q 036314 111 SFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVS 190 (347)
Q Consensus 111 ~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 190 (347)
++..+..-..+...|+|+-....++..+....|++||.+.+. +.+..+++|...|+
T Consensus 150 p~ys~~~w~s~asqVkwnyk~p~vlasshg~~i~vwd~r~gs------------------------~pl~s~K~~vs~vn 205 (1081)
T KOG0309|consen 150 PFYSTSSWRSAASQVKWNYKDPNVLASSHGNDIFVWDLRKGS------------------------TPLCSLKGHVSSVN 205 (1081)
T ss_pred ceeeeecccccCceeeecccCcchhhhccCCceEEEeccCCC------------------------cceEEecccceeee
Confidence 333343334445678887655555556777889999987642 34567778888888
Q ss_pred EEEeCC--CCeEEEEecCCcEEEEECCCCce--eeeeeeCeeeEEEEeeCCCCc-EEEEecCCCcEEEEeCCCC------
Q 036314 191 SVVWPQ--QETIYSASWDHSVRTWDVEMGKD--LSDIFCGKALNCIDIGGEGSA-LIAAGGSDPILRIWDPRKP------ 259 (347)
Q Consensus 191 ~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~la~~~~d~~i~iwd~~~~------ 259 (347)
++.|.. ...+.+.+.|++|+.||...... -+.+....++.--.+.|-+.. .+.---.++.+.+++.+..
T Consensus 206 ~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~e~~~~vtt~~piw~~r~~Pfg~g~~~mp~~G~n~v~~~~c~n~d~e~n~ 285 (1081)
T KOG0309|consen 206 SIDFNRFKYSEIMSSSNDGTVKFWDYSKSTTESKRTVTTNFPIWRGRYLPFGEGYCIMPMVGGNMVPQLRCENSDLEWNV 285 (1081)
T ss_pred hHHHhhhhhhhhcccCCCCceeeecccccccccceeccccCcceeccccccCceeEeccccCCeeeeeccccchhhhhcc
Confidence 888743 34588999999999999854321 111111222221111111111 1111111224444443321
Q ss_pred -CCCCCeEEecCCCCCeeEEEeCCCC---------CeEEEEEeCCCcEEEEEcCC
Q 036314 260 -GTSAPVFQFSSHNSWISACKWHNKS---------WFHLISASYDGKVMLWDLRT 304 (347)
Q Consensus 260 -~~~~~~~~~~~h~~~v~~v~~s~~~---------~~~l~s~s~D~~i~lwd~~~ 304 (347)
....++.+|.||.+.|....|-..+ .++|+|=|.|.++|+|.+..
T Consensus 286 ~~~~~pVh~F~GH~D~V~eFlWR~r~e~~~d~d~rdfQLVTWSkD~~lrlWpI~~ 340 (1081)
T KOG0309|consen 286 FDLNTPVHTFVGHDDVVLEFLWRKRKECDGDYDSRDFQLVTWSKDQTLRLWPIDS 340 (1081)
T ss_pred ccCCcceeeecCcchHHHHHhhhhcccccCCCCccceeEEEeecCCceEeeeccH
Confidence 1245789999999988666554322 36799999999999998864
No 255
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.04 E-value=2.6e-07 Score=85.15 Aligned_cols=242 Identities=11% Similarity=0.037 Sum_probs=128.8
Q ss_pred eEEEEcCCCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCc--EEEEeccccccccCccccceeeeeeccccceE
Q 036314 46 LGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQT--LRLWKFDAEELVNHPKKIRSFKILRGHKASVH 123 (347)
Q Consensus 46 ~i~iw~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~--v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~ 123 (347)
.+.+.|..|...+.+........+-+|+|++.. ..++++...+|. |.+.++.+++. +.+. ...+...
T Consensus 166 ~l~~~d~dG~~~~~lt~~~~~~~sP~wSPDG~~-~~~~y~S~~~g~~~I~~~~l~~g~~-------~~lt---~~~g~~~ 234 (428)
T PRK01029 166 ELWSVDYDGQNLRPLTQEHSLSITPTWMHIGSG-FPYLYVSYKLGVPKIFLGSLENPAG-------KKIL---ALQGNQL 234 (428)
T ss_pred eEEEEcCCCCCceEcccCCCCcccceEccCCCc-eEEEEEEccCCCceEEEEECCCCCc-------eEee---cCCCCcc
Confidence 455556666555556655566677899996542 123334555554 55556655431 1222 2333445
Q ss_pred EEEEeCCCCEEEEee-CCC----cEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CCC
Q 036314 124 SIAAETSGNMVCSGS-WDC----TISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQ 197 (347)
Q Consensus 124 ~v~~s~~~~~l~sgs-~Dg----~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~ 197 (347)
..+|+|||+.|+-.+ .+| .+.+|++..+.. + ...+...++........| |++
T Consensus 235 ~p~wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~~-g---------------------~~~~lt~~~~~~~~~p~wSPDG 292 (428)
T PRK01029 235 MPTFSPRKKLLAFISDRYGNPDLFIQSFSLETGAI-G---------------------KPRRLLNEAFGTQGNPSFSPDG 292 (428)
T ss_pred ceEECCCCCEEEEEECCCCCcceeEEEeecccCCC-C---------------------cceEeecCCCCCcCCeEECCCC
Confidence 678999998776443 233 333455543210 0 000011111112233456 677
Q ss_pred CeEEEEe-cCCcEEEEEC--CC-CceeeeeeeC-eeeEEEEeeCCCCcEEEEecCC--CcEEEEeCCCCCCCCCeEEecC
Q 036314 198 ETIYSAS-WDHSVRTWDV--EM-GKDLSDIFCG-KALNCIDIGGEGSALIAAGGSD--PILRIWDPRKPGTSAPVFQFSS 270 (347)
Q Consensus 198 ~~l~s~s-~dg~v~vwd~--~~-~~~~~~~~~~-~~~~~~~~~~~~~~~la~~~~d--~~i~iwd~~~~~~~~~~~~~~~ 270 (347)
+.|+..+ .+|..++|.+ .. +.....+... .......++|++..++.+...+ ..|.+||+.... ...+..
T Consensus 293 ~~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~----~~~Lt~ 368 (428)
T PRK01029 293 TRLVFVSNKDGRPRIYIMQIDPEGQSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGR----DYQLTT 368 (428)
T ss_pred CEEEEEECCCCCceEEEEECcccccceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCC----eEEccC
Confidence 8777655 4666666643 22 2222333222 2345667877765554444333 468999986432 233333
Q ss_pred CCCCeeEEEeCCCCCeEEEEEeC--CCcEEEEEcCCCccceeecCCCCeEEEEeecC
Q 036314 271 HNSWISACKWHNKSWFHLISASY--DGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR 325 (347)
Q Consensus 271 h~~~v~~v~~s~~~~~~l~s~s~--D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~ 325 (347)
....+....|+||+..++.++.. ...|.++|+..++... +....+.+...+|+|
T Consensus 369 ~~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl~~g~~~~-Lt~~~g~~~~p~Ws~ 424 (428)
T PRK01029 369 SPENKESPSWAIDSLHLVYSAGNSNESELYLISLITKKTRK-IVIGSGEKRFPSWGA 424 (428)
T ss_pred CCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEE-eecCCCcccCceecC
Confidence 33356778999999765555543 3468888988765433 333345566777864
No 256
>KOG4714 consensus Nucleoporin [Nuclear structure]
Probab=99.04 E-value=6e-09 Score=84.91 Aligned_cols=232 Identities=20% Similarity=0.255 Sum_probs=134.3
Q ss_pred EEEEccCCCcEEEEeccccccccCcc---ccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccc
Q 036314 82 TVATASKDQTLRLWKFDAEELVNHPK---KIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQV 158 (347)
Q Consensus 82 ~l~s~s~Dg~v~~wd~~~~~~~~~~~---~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~ 158 (347)
.|+++-.++.+.....-.+.+....+ ...++..+.-|+.+-.+-+.+-.++.++.+..||.+.+++.+.........
T Consensus 49 ~lf~~e~~~~~ss~g~~r~~~~~~~~rt~~i~~~~~~a~~sep~p~~~~s~~~t~V~~~~~dg~~~v~s~~~~~~~~~~i 128 (319)
T KOG4714|consen 49 ILFTGETSSQIISLGKGRGRCISLWERDDGIDPFKVLAKNSEIDPNDACTMTDNRVCIGYADGSLAVFSTDKDLALMSRI 128 (319)
T ss_pred eeecccchhheeeeccceEEEechhhcccCcCceeeeeccCCCCCcccccccCCceEecCCCceEEEEechHHHhhhhhc
Confidence 46666666666555443322211111 112333344455444334445557889999999999999876421000000
Q ss_pred eeeeccCCCccccccccccccccccCCccceEEEE-eCCCCeEEEE-----ecCCcEEEEECCCCcee-eeeeeCeeeEE
Q 036314 159 SIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVV-WPQQETIYSA-----SWDHSVRTWDVEMGKDL-SDIFCGKALNC 231 (347)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~-~~~~~~l~s~-----s~dg~v~vwd~~~~~~~-~~~~~~~~~~~ 231 (347)
-.-|.+- .+.. ...++.+.++ -.-+..+.|+++.-+.. ........+.+
T Consensus 129 -----------------------~~~~~~~-as~~~~~~~~~i~s~~~g~~n~~d~~~a~~~~p~~t~~~~~~~~~~v~~ 184 (319)
T KOG4714|consen 129 -----------------------PSIHSGS-ASRKICRHGNSILSGGCGNWNAQDNFYANTLDPIKTLIPSKKALDAVTA 184 (319)
T ss_pred -----------------------ccccccc-cccceeecccEEecCCcceEeeccceeeecccccccccccccccccchh
Confidence 0001000 0000 1222333322 11224556665432211 11112234778
Q ss_pred EEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCcccee-
Q 036314 232 IDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSV- 310 (347)
Q Consensus 232 ~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~- 310 (347)
++-+|...++++.|++||.+.+||.|.. ..+...+..|...++.+-|+|.++..|.++++||.+..||..+ .++..
T Consensus 185 l~~hp~qq~~v~cgt~dg~~~l~d~rn~--~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas~-~~l~i~ 261 (319)
T KOG4714|consen 185 LCSHPAQQHLVCCGTDDGIVGLWDARNV--AMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDAST-TFLSIS 261 (319)
T ss_pred hhCCcccccEEEEecCCCeEEEEEcccc--cchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcCCC-ceEEec
Confidence 8888888889999999999999999864 2345677899999999999999999999999999999999874 11110
Q ss_pred ---------ecCCCCeEE--------------EEeec--CCCEEEEccCCceEEEee
Q 036314 311 ---------IDSHKDKVL--------------CADWW--RGDSVISGGVDSKLCVSS 342 (347)
Q Consensus 311 ---------~~~h~~~v~--------------~~~~~--~~~~l~s~s~D~~v~vw~ 342 (347)
+.+ ++|. ++.-- -|.+|+.|+.-+.|++.+
T Consensus 262 ~~~s~~s~WLsg--D~v~s~i~i~~ll~~~~~SinsfDV~g~~lVcgtd~eaIyl~~ 316 (319)
T KOG4714|consen 262 NQASVISSWLSG--DPVKSRIEITSLLPSRSLSINSFDVLGPCLVCGTDAEAIYLTR 316 (319)
T ss_pred CccccccccccC--CcccceEeeeccccccceeeeeeeccCceEEeccccceEEEec
Confidence 111 1121 11110 277899999888888875
No 257
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.01 E-value=1.4e-06 Score=88.50 Aligned_cols=254 Identities=13% Similarity=0.096 Sum_probs=143.1
Q ss_pred CCCEEEEEecCCeEEEEcCCCeEEEEeec--cC------------CceEEEEEeecCCCceEEEEEccCCCcEEEEeccc
Q 036314 34 NPGFILTGCYDNLGRVWKAGGVCTHILEG--HC------------GAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDA 99 (347)
Q Consensus 34 ~~~~l~sg~~d~~i~iw~~~~~~~~~l~~--h~------------~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~ 99 (347)
++.++++-..++.|+++|..|..+..+.+ .. .....|++.++++ ...++-...+.|+.+|+.+
T Consensus 579 ~g~lyVaDs~n~rI~v~d~~G~~i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn---~LYVaDt~n~~Ir~id~~~ 655 (1057)
T PLN02919 579 NNRLFISDSNHNRIVVTDLDGNFIVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKN---LLYVADTENHALREIDFVN 655 (1057)
T ss_pred CCeEEEEECCCCeEEEEeCCCCEEEEEccCCCcCCCCCchhccccCCCcEEEEeCCCC---EEEEEeCCCceEEEEecCC
Confidence 45678888888999999988766544433 11 1235677766433 2344555667899999866
Q ss_pred cccccCccccceeeeeec------c-ccceEEEEEeC-CCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccc
Q 036314 100 EELVNHPKKIRSFKILRG------H-KASVHSIAAET-SGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEE 171 (347)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~------h-~~~V~~v~~s~-~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 171 (347)
+..............+.+ . -..-..+++++ ++.++++.+.++.|++||..++... .....+...
T Consensus 656 ~~V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~-----~~~G~G~~~--- 727 (1057)
T PLN02919 656 ETVRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTR-----VFSGDGYER--- 727 (1057)
T ss_pred CEEEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCCeEE-----EEecCCccc---
Confidence 532100000000000000 0 11235789999 5667788888999999998654210 000000000
Q ss_pred ccccccccccccCCccceEEEEe-CCCCe-EEEEecCCcEEEEECCCCceeeee-----------eeC-----------e
Q 036314 172 PQLEGEAISTLVGHTQCVSSVVW-PQQET-IYSASWDHSVRTWDVEMGKDLSDI-----------FCG-----------K 227 (347)
Q Consensus 172 ~~~~~~~~~~~~~h~~~v~~~~~-~~~~~-l~s~s~dg~v~vwd~~~~~~~~~~-----------~~~-----------~ 227 (347)
...+... . ...-.....+++ ++++. +++-+.++.|++||+.++...... ..+ .
T Consensus 728 -~~~g~~~-~-~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~ 804 (1057)
T PLN02919 728 -NLNGSSG-T-STSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQ 804 (1057)
T ss_pred -cCCCCcc-c-cccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhcc
Confidence 0000000 0 000012345666 56664 456667789999999875421100 000 0
Q ss_pred eeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecC--------------CCCCeeEEEeCCCCCeEEEEEeC
Q 036314 228 ALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSS--------------HNSWISACKWHNKSWFHLISASY 293 (347)
Q Consensus 228 ~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~--------------h~~~v~~v~~s~~~~~~l~s~s~ 293 (347)
....+++.+++ .++++...++.|++||..... +.++.+ .......++++++|. ++++-+.
T Consensus 805 ~P~Gvavd~dG-~LYVADs~N~rIrviD~~tg~----v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~-lyVaDt~ 878 (1057)
T PLN02919 805 HPLGVLCAKDG-QIYVADSYNHKIKKLDPATKR----VTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGR-LFVADTN 878 (1057)
T ss_pred CCceeeEeCCC-cEEEEECCCCEEEEEECCCCe----EEEEeccCCcCCCCCcccccccCCceEEEEeCCCC-EEEEECC
Confidence 13456676554 577788889999999986321 222222 223456789999985 6788888
Q ss_pred CCcEEEEEcCCCcc
Q 036314 294 DGKVMLWDLRTAWP 307 (347)
Q Consensus 294 D~~i~lwd~~~~~~ 307 (347)
+++|++||+++++.
T Consensus 879 Nn~Irvid~~~~~~ 892 (1057)
T PLN02919 879 NSLIRYLDLNKGEA 892 (1057)
T ss_pred CCEEEEEECCCCcc
Confidence 99999999988754
No 258
>KOG1064 consensus RAVE (regulator of V-ATPase assembly) complex subunit RAV1/DMX protein, WD repeat superfamily [General function prediction only]
Probab=98.96 E-value=6.2e-09 Score=104.33 Aligned_cols=192 Identities=18% Similarity=0.275 Sum_probs=133.3
Q ss_pred eeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe
Q 036314 115 LRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW 194 (347)
Q Consensus 115 ~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 194 (347)
+..|-..|.++.-+|.-.+-+||+.||.|++|.-..+.. +. +.++ .|. ..|..+.|
T Consensus 2204 ~k~~v~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~----v~------------------~~rt-~g~-s~vtr~~f 2259 (2439)
T KOG1064|consen 2204 IKHPVENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQ----VV------------------CFRT-AGN-SRVTRSRF 2259 (2439)
T ss_pred eecccCceeeecCCCCCceEEecCCCceEEEEeccCCCe----EE------------------Eeec-cCc-chhhhhhh
Confidence 344566677777788888999999999999996443211 00 0111 111 34555555
Q ss_pred -CCCCeEEEEecCCcEEEEECCCCceeeeeeeCe-eeEEEEeeCCCCcEEEEe---cCCCcEEEEeCCCCCCCCCeEEec
Q 036314 195 -PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGK-ALNCIDIGGEGSALIAAG---GSDPILRIWDPRKPGTSAPVFQFS 269 (347)
Q Consensus 195 -~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~la~~---~~d~~i~iwd~~~~~~~~~~~~~~ 269 (347)
.+|+.+..+..||.+.+|.+. ++.....++++ ....+.|-. .+++++ .+++.+.+||.-.+.....+ ..
T Consensus 2260 ~~qGnk~~i~d~dg~l~l~q~~-pk~~~s~qchnk~~~Df~Fi~---s~~~tag~s~d~~n~~lwDtl~~~~~s~v--~~ 2333 (2439)
T KOG1064|consen 2260 NHQGNKFGIVDGDGDLSLWQAS-PKPYTSWQCHNKALSDFRFIG---SLLATAGRSSDNRNVCLWDTLLPPMNSLV--HT 2333 (2439)
T ss_pred cccCCceeeeccCCceeecccC-CcceeccccCCccccceeeee---hhhhccccCCCCCcccchhcccCccccee--ee
Confidence 477888888999999999976 44444455443 344444432 345554 35789999997654322222 26
Q ss_pred CCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeecCCCEEEEccCCceEEEeecccC
Q 036314 270 SHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGGVDSKLCVSSGVSI 346 (347)
Q Consensus 270 ~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~D~~v~vw~~~~~ 346 (347)
.|.+.++++++.|.. .+|+||+.+|.|.|||++..+..++++. +....++++|+..|.++||+...+
T Consensus 2334 ~H~~gaT~l~~~P~~-qllisggr~G~v~l~D~rqrql~h~~~~---------~~~~~~f~~~ss~g~ikIw~~s~~ 2400 (2439)
T KOG1064|consen 2334 CHDGGATVLAYAPKH-QLLISGGRKGEVCLFDIRQRQLRHTFQA---------LDTREYFVTGSSEGNIKIWRLSEF 2400 (2439)
T ss_pred ecCCCceEEEEcCcc-eEEEecCCcCcEEEeehHHHHHHHHhhh---------hhhhheeeccCcccceEEEEcccc
Confidence 899999999999987 4799999999999999998877776654 323457999999999999997643
No 259
>KOG3914 consensus WD repeat protein WDR4 [Function unknown]
Probab=98.95 E-value=3.6e-08 Score=85.06 Aligned_cols=153 Identities=16% Similarity=0.202 Sum_probs=99.8
Q ss_pred CEEEEEecCCeEEEEcCCC-----eEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccc
Q 036314 36 GFILTGCYDNLGRVWKAGG-----VCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIR 110 (347)
Q Consensus 36 ~~l~sg~~d~~i~iw~~~~-----~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~ 110 (347)
.+||.+-.+....+++..+ ++......... -+++.|..+.. .......+++...+.+|....+.
T Consensus 75 ~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~v~~~-~~ai~~~~~~~-sv~v~dkagD~~~~di~s~~~~~--------- 143 (390)
T KOG3914|consen 75 RLVAVATSSKQRAVFDYRENPKGAKLLDVSCVPKR-PTAISFIREDT-SVLVADKAGDVYSFDILSADSGR--------- 143 (390)
T ss_pred eEEEEEeCCCceEEEEEecCCCcceeeeEeecccC-cceeeeeeccc-eEEEEeecCCceeeeeecccccC---------
Confidence 4666655555544554321 12222222222 24455554332 12223345555667777655332
Q ss_pred eeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceE
Q 036314 111 SFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVS 190 (347)
Q Consensus 111 ~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 190 (347)
...+.||-.-+..|+++||+++|+++.+|..||+-...... ..-.-+-||+..|.
T Consensus 144 -~~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f------------------------~IesfclGH~eFVS 198 (390)
T KOG3914|consen 144 -CEPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATF------------------------VIESFCLGHKEFVS 198 (390)
T ss_pred -cchhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCccc------------------------chhhhccccHhhee
Confidence 22356899999999999999999999999999997554211 01123467999999
Q ss_pred EEEeCCCCeEEEEecCCcEEEEECCCCceeeeee
Q 036314 191 SVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIF 224 (347)
Q Consensus 191 ~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~ 224 (347)
.++.-++..|+|+|.|++|++||+++++.+..+.
T Consensus 199 ~isl~~~~~LlS~sGD~tlr~Wd~~sgk~L~t~d 232 (390)
T KOG3914|consen 199 TISLTDNYLLLSGSGDKTLRLWDITSGKLLDTCD 232 (390)
T ss_pred eeeeccCceeeecCCCCcEEEEecccCCcccccc
Confidence 9998777789999999999999999999876543
No 260
>KOG2041 consensus WD40 repeat protein [General function prediction only]
Probab=98.94 E-value=1.9e-07 Score=86.22 Aligned_cols=281 Identities=17% Similarity=0.228 Sum_probs=174.2
Q ss_pred CcCCCCCcCCceeeccCC-CCCEEEEEecCCeEEEEcCC---------C-----e--EEEEeeccCCceEEEEEeecCCC
Q 036314 16 KEEEPSLHDDWVSAVDGS-NPGFILTGCYDNLGRVWKAG---------G-----V--CTHILEGHCGAVSSVNIIKSDGL 78 (347)
Q Consensus 16 ~~~~~~~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~---------~-----~--~~~~l~~h~~~V~~v~~~~~~~~ 78 (347)
+.++..+......++... ..+|||.||.||.+++-.+. | . .-++|.||.+.|.-+.|....
T Consensus 6 skki~iPnnvkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~-- 83 (1189)
T KOG2041|consen 6 SKKIGIPNNVKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENN-- 83 (1189)
T ss_pred ecccCCCCCceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEecccc--
Confidence 445555555667888877 57899999999999998652 1 0 114689999999999997632
Q ss_pred ceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccc
Q 036314 79 KYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQV 158 (347)
Q Consensus 79 ~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~ 158 (347)
+.|-|+..+|-|.+|-+-.+.-.... +-...++-|.+++|+.||..+.-.=.||.|.+=.++....-+
T Consensus 84 --QKLTtSDt~GlIiVWmlykgsW~EEM-------iNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGNRIwg--- 151 (1189)
T KOG2041|consen 84 --QKLTTSDTSGLIIVWMLYKGSWCEEM-------INNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGNRIWG--- 151 (1189)
T ss_pred --ccccccCCCceEEEEeeecccHHHHH-------hhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeeccceecc---
Confidence 35778888999999988655321110 001235668899999999999888888888775544221100
Q ss_pred eeeeccCCCccccccccccccccccCCccceEEEEeC-CCCeEEEEecCCcEEEEECCCCceee-----eee-------e
Q 036314 159 SIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP-QQETIYSASWDHSVRTWDVEMGKDLS-----DIF-------C 225 (347)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~l~s~s~dg~v~vwd~~~~~~~~-----~~~-------~ 225 (347)
+ .+++. -...+.|+ +.+.++.+-.+|.+.+||....-..+ .+. .
T Consensus 152 ------------------K---eLkg~--~l~hv~ws~D~~~~Lf~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~ 208 (1189)
T KOG2041|consen 152 ------------------K---ELKGQ--LLAHVLWSEDLEQALFKKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNF 208 (1189)
T ss_pred ------------------h---hcchh--eccceeecccHHHHHhhhcCCcEEEecccccHHHhhhhceEEeeeeeecCC
Confidence 0 11111 01234454 44556666677889999865331110 000 0
Q ss_pred CeeeEEEE-------eeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCC---
Q 036314 226 GKALNCID-------IGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDG--- 295 (347)
Q Consensus 226 ~~~~~~~~-------~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~--- 295 (347)
+..+..+. ..+|+...+|.+-..|.+.|..-.+ .+.|... ...=++....|+++|. .||.++.|.
T Consensus 209 ~~kia~i~w~~g~~~~v~pdrP~lavcy~nGr~QiMR~eN--D~~Pvv~--dtgm~~vgakWnh~G~-vLAvcG~~~da~ 283 (1189)
T KOG2041|consen 209 PTKIAEIEWNTGPYQPVPPDRPRLAVCYANGRMQIMRSEN--DPEPVVV--DTGMKIVGAKWNHNGA-VLAVCGNDSDAD 283 (1189)
T ss_pred CccccceeeccCccccCCCCCCEEEEEEcCceehhhhhcC--CCCCeEE--ecccEeecceecCCCc-EEEEccCccccc
Confidence 11111111 2245677889999999998875432 3334322 1224678899999996 588887652
Q ss_pred ------cEEEEEcCCCccceeecCCCCeEEEEeec-CCCEEEEccCCceEEE
Q 036314 296 ------KVMLWDLRTAWPLSVIDSHKDKVLCADWW-RGDSVISGGVDSKLCV 340 (347)
Q Consensus 296 ------~i~lwd~~~~~~~~~~~~h~~~v~~~~~~-~~~~l~s~s~D~~v~v 340 (347)
.|..+..- |..+.+++-....|+++.|- .|-++|-+ .|+.|.+
T Consensus 284 ~~~d~n~v~Fysp~-G~i~gtlkvpg~~It~lsWEg~gLriA~A-vdsfiyf 333 (1189)
T KOG2041|consen 284 EPTDSNKVHFYSPY-GHIVGTLKVPGSCITGLSWEGTGLRIAIA-VDSFIYF 333 (1189)
T ss_pred CccccceEEEeccc-hhheEEEecCCceeeeeEEcCCceEEEEE-ecceEEE
Confidence 45555442 55667777666788999994 45565543 3666544
No 261
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=98.94 E-value=1.6e-06 Score=79.03 Aligned_cols=270 Identities=13% Similarity=0.103 Sum_probs=139.3
Q ss_pred CCEEEEEecCCeEEEEcC-CCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceee
Q 036314 35 PGFILTGCYDNLGRVWKA-GGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFK 113 (347)
Q Consensus 35 ~~~l~sg~~d~~i~iw~~-~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~ 113 (347)
++.++.++.|+.+..+|. .|+.+...... +.+.+.-... + ..++.++.|+.|..||.++++..-..+......
T Consensus 105 ~~~v~v~~~~g~l~ald~~tG~~~W~~~~~-~~~~~~p~v~-~----~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~ 178 (377)
T TIGR03300 105 GGLVFVGTEKGEVIALDAEDGKELWRAKLS-SEVLSPPLVA-N----GLVVVRTNDGRLTALDAATGERLWTYSRVTPAL 178 (377)
T ss_pred CCEEEEEcCCCEEEEEECCCCcEeeeeccC-ceeecCCEEE-C----CEEEEECCCCeEEEEEcCCCceeeEEccCCCce
Confidence 455666777777777776 46554433221 1122111111 1 135567778899999987765321100000000
Q ss_pred eeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEE
Q 036314 114 ILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVV 193 (347)
Q Consensus 114 ~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 193 (347)
.+.+...++ +. +..++.+..++.+..+|.+++...... ....... ......+... .....
T Consensus 179 ~~~~~~sp~----~~--~~~v~~~~~~g~v~ald~~tG~~~W~~------~~~~~~g-----~~~~~~~~~~---~~~p~ 238 (377)
T TIGR03300 179 TLRGSASPV----IA--DGGVLVGFAGGKLVALDLQTGQPLWEQ------RVALPKG-----RTELERLVDV---DGDPV 238 (377)
T ss_pred eecCCCCCE----EE--CCEEEEECCCCEEEEEEccCCCEeeee------ccccCCC-----CCchhhhhcc---CCccE
Confidence 011111111 11 235677788888888888765321100 0000000 0000000000 00001
Q ss_pred eCCCCeEEEEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCC-C
Q 036314 194 WPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSH-N 272 (347)
Q Consensus 194 ~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h-~ 272 (347)
. .++.++.++.+|.+..||.++++.+-...... .....+ .++ .+..++.|+.+..+|....+ .+...... .
T Consensus 239 ~-~~~~vy~~~~~g~l~a~d~~tG~~~W~~~~~~-~~~p~~--~~~-~vyv~~~~G~l~~~d~~tG~---~~W~~~~~~~ 310 (377)
T TIGR03300 239 V-DGGQVYAVSYQGRVAALDLRSGRVLWKRDASS-YQGPAV--DDN-RLYVTDADGVVVALDRRSGS---ELWKNDELKY 310 (377)
T ss_pred E-ECCEEEEEEcCCEEEEEECCCCcEEEeeccCC-ccCceE--eCC-EEEEECCCCeEEEEECCCCc---EEEccccccC
Confidence 1 34678888899999999999887553332111 111122 233 45666789999999986432 12222111 1
Q ss_pred CCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEE-EeecCCCEEEEccCCceEEEee
Q 036314 273 SWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLC-ADWWRGDSVISGGVDSKLCVSS 342 (347)
Q Consensus 273 ~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~-~~~~~~~~l~s~s~D~~v~vw~ 342 (347)
....+.... +. .|+.++.||.+.++|.++++.+..+..+...+.. ..+. ++.|..++.||.|..++
T Consensus 311 ~~~ssp~i~--g~-~l~~~~~~G~l~~~d~~tG~~~~~~~~~~~~~~~sp~~~-~~~l~v~~~dG~l~~~~ 377 (377)
T TIGR03300 311 RQLTAPAVV--GG-YLVVGDFEGYLHWLSREDGSFVARLKTDGSGIASPPVVV-GDGLLVQTRDGDLYAFR 377 (377)
T ss_pred CccccCEEE--CC-EEEEEeCCCEEEEEECCCCCEEEEEEcCCCccccCCEEE-CCEEEEEeCCceEEEeC
Confidence 111222221 22 5888999999999999999888777655544332 2333 45677888999987653
No 262
>KOG4547 consensus WD40 repeat-containing protein [General function prediction only]
Probab=98.94 E-value=6.3e-07 Score=81.09 Aligned_cols=190 Identities=13% Similarity=0.175 Sum_probs=128.8
Q ss_pred CCEEEEEecCCeEEEEcCC-CeEEEEeec--c-CCceEEEEE------ee----------cCCCceEEEEEccCCCcEEE
Q 036314 35 PGFILTGCYDNLGRVWKAG-GVCTHILEG--H-CGAVSSVNI------IK----------SDGLKYVTVATASKDQTLRL 94 (347)
Q Consensus 35 ~~~l~sg~~d~~i~iw~~~-~~~~~~l~~--h-~~~V~~v~~------~~----------~~~~~~~~l~s~s~Dg~v~~ 94 (347)
..|+|....||.+|+|+.. ++..+.|.. | ++.-.+..| +| ....+-.+++-|...|.|.+
T Consensus 5 ~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~v~~ 84 (541)
T KOG4547|consen 5 LDYFALSTGDGRLRIWDTAKNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGSVLL 84 (541)
T ss_pred hheEeecCCCCeEEEEEccCceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCccEEE
Confidence 4589999999999999964 433333331 1 122222222 11 11223457888999999999
Q ss_pred EeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccc
Q 036314 95 WKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQL 174 (347)
Q Consensus 95 wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (347)
|++..+++.. .-.-..|.++|.++..+.+-..|.|++.|+.+-.|+.....
T Consensus 85 ys~~~g~it~-------~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~---------------------- 135 (541)
T KOG4547|consen 85 YSVAGGEITA-------KLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKV---------------------- 135 (541)
T ss_pred EEecCCeEEE-------EEecCCCCCcceeeecccccCceEecCCceeEEEEecccce----------------------
Confidence 9998876431 11224699999999988888999999999999999876431
Q ss_pred cccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeeeeC-eeeEEEEeeCC-----CCcEEEEecC
Q 036314 175 EGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCG-KALNCIDIGGE-----GSALIAAGGS 247 (347)
Q Consensus 175 ~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~-~~~~~~~~~~~-----~~~~la~~~~ 247 (347)
.++.+...+.-+.++.. |++..++++| +.|++||+++.+.+.++..+ .++.++.|... +..++.+...
T Consensus 136 ---~~~~~~~~~~~~~sl~is~D~~~l~~as--~~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~ 210 (541)
T KOG4547|consen 136 ---IIRIWKEQKPLVSSLCISPDGKILLTAS--RQIKVLDIETKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAA 210 (541)
T ss_pred ---eeeeeccCCCccceEEEcCCCCEEEecc--ceEEEEEccCceEEEEecCCCcceEEEEEEEeccccccceeeecccc
Confidence 23334444445566665 6778888765 78999999999988887644 47888887644 3445555555
Q ss_pred CCcEEEEeCCC
Q 036314 248 DPILRIWDPRK 258 (347)
Q Consensus 248 d~~i~iwd~~~ 258 (347)
+.-+.+|-.+.
T Consensus 211 ~r~i~~w~v~~ 221 (541)
T KOG4547|consen 211 ERGITVWVVEK 221 (541)
T ss_pred ccceeEEEEEc
Confidence 66677786553
No 263
>PRK00178 tolB translocation protein TolB; Provisional
Probab=98.93 E-value=3.9e-07 Score=84.54 Aligned_cols=217 Identities=13% Similarity=0.050 Sum_probs=117.6
Q ss_pred CcCCceeeccCC-CCCEEEEEecC---CeEEEEcCCCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCC--cEEEE
Q 036314 22 LHDDWVSAVDGS-NPGFILTGCYD---NLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQ--TLRLW 95 (347)
Q Consensus 22 ~h~~~v~~~~~~-~~~~l~sg~~d---~~i~iw~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg--~v~~w 95 (347)
.+...+...+++ +++.|+..+.+ ..|.+|++.+...+.+....+.+....|+|++. ..+++.+.+| .|.+|
T Consensus 196 ~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~l~~~~g~~~~~~~SpDG~---~la~~~~~~g~~~Iy~~ 272 (430)
T PRK00178 196 QSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQITNFEGLNGAPAWSPDGS---KLAFVLSKDGNPEIYVM 272 (430)
T ss_pred cCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEEccCCCCCcCCeEECCCCC---EEEEEEccCCCceEEEE
Confidence 456677777877 55677776654 368888876433333444444456788998553 2334555555 57777
Q ss_pred eccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEee-CCCc--EEEEecCCCCCCCccceeeeccCCCccccc
Q 036314 96 KFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGS-WDCT--ISLWRTNDSDAAGNQVSIKKRKGNNQVEEP 172 (347)
Q Consensus 96 d~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs-~Dg~--I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (347)
|+.+++. ..+..+........|+|||+.++-.+ .++. |.++++.++...
T Consensus 273 d~~~~~~----------~~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~------------------ 324 (430)
T PRK00178 273 DLASRQL----------SRVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAE------------------ 324 (430)
T ss_pred ECCCCCe----------EEcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEE------------------
Confidence 8766532 22334444556678999998765443 4444 555555432110
Q ss_pred cccccccccccCCccceEEEEe-CCCCeEEEEecC-C--cEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCC
Q 036314 173 QLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWD-H--SVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSD 248 (347)
Q Consensus 173 ~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~d-g--~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d 248 (347)
.+ +..+. ......| |+++.|+..+.+ + .|.+||+.++.. ..+..........++|++..++.+...+
T Consensus 325 -----~l-t~~~~--~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~-~~lt~~~~~~~p~~spdg~~i~~~~~~~ 395 (430)
T PRK00178 325 -----RV-TFVGN--YNARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSV-RILTDTSLDESPSVAPNGTMLIYATRQQ 395 (430)
T ss_pred -----Ee-ecCCC--CccceEECCCCCEEEEEEccCCceEEEEEECCCCCE-EEccCCCCCCCceECCCCCEEEEEEecC
Confidence 00 01111 1122344 577777665543 3 477889887653 3332222222346777666555554444
Q ss_pred C--cEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCC
Q 036314 249 P--ILRIWDPRKPGTSAPVFQFSSHNSWISACKWHN 282 (347)
Q Consensus 249 ~--~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~ 282 (347)
+ .+.++++.. . ....+..+...+...+|+|
T Consensus 396 g~~~l~~~~~~g--~--~~~~l~~~~g~~~~p~ws~ 427 (430)
T PRK00178 396 GRGVLMLVSING--R--VRLPLPTAQGEVREPSWSP 427 (430)
T ss_pred CceEEEEEECCC--C--ceEECcCCCCCcCCCccCC
Confidence 3 455666542 1 1234444445566667776
No 264
>PRK04792 tolB translocation protein TolB; Provisional
Probab=98.91 E-value=4.9e-07 Score=83.97 Aligned_cols=216 Identities=9% Similarity=0.035 Sum_probs=113.8
Q ss_pred cCCceeeccCC-CCCEEEEEec-CC--eEEEEcCCCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCc--EEEEe
Q 036314 23 HDDWVSAVDGS-NPGFILTGCY-DN--LGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQT--LRLWK 96 (347)
Q Consensus 23 h~~~v~~~~~~-~~~~l~sg~~-d~--~i~iw~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~--v~~wd 96 (347)
+...+....++ +++.|+..+. ++ .|.+||+.+.....+....+......|+|++. ..+++.+.++. |.++|
T Consensus 216 ~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~lt~~~g~~~~~~wSPDG~---~La~~~~~~g~~~Iy~~d 292 (448)
T PRK04792 216 SPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREKVTSFPGINGAPRFSPDGK---KLALVLSKDGQPEIYVVD 292 (448)
T ss_pred CCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEEecCCCCCcCCeeECCCCC---EEEEEEeCCCCeEEEEEE
Confidence 34456677777 4567776554 33 57777875322223332233345678998653 23445667776 55666
Q ss_pred ccccccccCccccceeeeeeccccceEEEEEeCCCCEEEE-eeCCCcEEEE--ecCCCCCCCccceeeeccCCCcccccc
Q 036314 97 FDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCS-GSWDCTISLW--RTNDSDAAGNQVSIKKRKGNNQVEEPQ 173 (347)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~s-gs~Dg~I~iw--d~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (347)
+.+++. ..+..+.......+|+|||+.++. ...++...|| |+.++..
T Consensus 293 l~tg~~----------~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~-------------------- 342 (448)
T PRK04792 293 IATKAL----------TRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKV-------------------- 342 (448)
T ss_pred CCCCCe----------EECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCE--------------------
Confidence 655431 233344455567889999987754 4445555555 4433210
Q ss_pred ccccccccccCCccceEEEEe-CCCCeEEEEec-CCc--EEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCC
Q 036314 174 LEGEAISTLVGHTQCVSSVVW-PQQETIYSASW-DHS--VRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDP 249 (347)
Q Consensus 174 ~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~-dg~--v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~ 249 (347)
..+ ++.++ ......| |+++.|+..+. ++. |.++|+.++.. ..+..........++|++..++.+...++
T Consensus 343 ---~~L-t~~g~--~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~-~~lt~~~~d~~ps~spdG~~I~~~~~~~g 415 (448)
T PRK04792 343 ---SRL-TFEGE--QNLGGSITPDGRSMIMVNRTNGKFNIARQDLETGAM-QVLTSTRLDESPSVAPNGTMVIYSTTYQG 415 (448)
T ss_pred ---EEE-ecCCC--CCcCeeECCCCCEEEEEEecCCceEEEEEECCCCCe-EEccCCCCCCCceECCCCCEEEEEEecCC
Confidence 000 11111 1122344 67777766554 343 44568777653 22222211122357777665655555555
Q ss_pred c--EEEEeCCCCCCCCCeEEecCCCCCeeEEEeCC
Q 036314 250 I--LRIWDPRKPGTSAPVFQFSSHNSWISACKWHN 282 (347)
Q Consensus 250 ~--i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~ 282 (347)
. +.+++... . ....+..+.+.+...+|+|
T Consensus 416 ~~~l~~~~~~G--~--~~~~l~~~~g~~~~p~Wsp 446 (448)
T PRK04792 416 KQVLAAVSIDG--R--FKARLPAGQGEVKSPAWSP 446 (448)
T ss_pred ceEEEEEECCC--C--ceEECcCCCCCcCCCccCC
Confidence 4 66667542 2 2344555555667777876
No 265
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=98.89 E-value=8.6e-06 Score=73.18 Aligned_cols=267 Identities=11% Similarity=0.129 Sum_probs=147.5
Q ss_pred ccCC-CCCEEEEEec----CCeEEEEcCC---CeEEE--EeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccc
Q 036314 30 VDGS-NPGFILTGCY----DNLGRVWKAG---GVCTH--ILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDA 99 (347)
Q Consensus 30 ~~~~-~~~~l~sg~~----d~~i~iw~~~---~~~~~--~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~ 99 (347)
++++ ++++|.+... ++.|..|+.. +.+.. ...........+++.+++. ..+++...+|+|.++++..
T Consensus 42 l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~~~~g~---~l~vany~~g~v~v~~l~~ 118 (345)
T PF10282_consen 42 LAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIAVDPDGR---FLYVANYGGGSVSVFPLDD 118 (345)
T ss_dssp EEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEEEEECTTSS---EEEEEETTTTEEEEEEECT
T ss_pred EEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEEEEEecCCC---EEEEEEccCCeEEEEEccC
Confidence 4444 4566666665 4688888642 43322 2222233445677777543 2444455799999999976
Q ss_pred c-ccccCccccceeeeee--------ccccceEEEEEeCCCCEEEEe-eCCCcEEEEecCCCCCCCccceeeeccCCCcc
Q 036314 100 E-ELVNHPKKIRSFKILR--------GHKASVHSIAAETSGNMVCSG-SWDCTISLWRTNDSDAAGNQVSIKKRKGNNQV 169 (347)
Q Consensus 100 ~-~~~~~~~~~~~~~~~~--------~h~~~V~~v~~s~~~~~l~sg-s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~ 169 (347)
. .+.... ...... .-....+++.|+|+|++++.. -....|.+|++...... ...
T Consensus 119 ~g~l~~~~----~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~---l~~--------- 182 (345)
T PF10282_consen 119 DGSLGEVV----QTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGK---LTP--------- 182 (345)
T ss_dssp TSEEEEEE----EEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-T---EEE---------
T ss_pred Ccccceee----eecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCEEEEEEEeCCCce---EEE---------
Confidence 3 221100 000010 113447899999999987765 22347899988653210 000
Q ss_pred ccccccccccccccCCccceEEEEe-CCCCeEE-EEecCCcEEEEECC--CCce--eeeeee-------CeeeEEEEeeC
Q 036314 170 EEPQLEGEAISTLVGHTQCVSSVVW-PQQETIY-SASWDHSVRTWDVE--MGKD--LSDIFC-------GKALNCIDIGG 236 (347)
Q Consensus 170 ~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~-s~s~dg~v~vwd~~--~~~~--~~~~~~-------~~~~~~~~~~~ 236 (347)
...+ .+. ....-+.+.| +++++++ ..-.+++|.++++. .+.. +..+.. ......+.+++
T Consensus 183 ------~~~~-~~~-~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~isp 254 (345)
T PF10282_consen 183 ------VDSI-KVP-PGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISP 254 (345)
T ss_dssp ------EEEE-ECS-TTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-T
T ss_pred ------eecc-ccc-cCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEec
Confidence 0000 111 1122345666 5667664 44567789999887 3321 111111 11356788888
Q ss_pred CCCcEEEEecCCCcEEEEeCCCC-CCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcC--CCccceeec-
Q 036314 237 EGSALIAAGGSDPILRIWDPRKP-GTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLR--TAWPLSVID- 312 (347)
Q Consensus 237 ~~~~~la~~~~d~~i~iwd~~~~-~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~--~~~~~~~~~- 312 (347)
++..+.++.-..+.|.+|++... +....+..+......-+.+.++|++.+++++.-.++.|.+|+++ +|.....-.
T Consensus 255 dg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~d~~tG~l~~~~~~ 334 (345)
T PF10282_consen 255 DGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSVFDIDPDTGKLTPVGSS 334 (345)
T ss_dssp TSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEE
T ss_pred CCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEEEEEeCCCCcEEEeccc
Confidence 77777777777899999998432 22233344444455678999999998766666688899999774 554322211
Q ss_pred CCCCeEEEEee
Q 036314 313 SHKDKVLCADW 323 (347)
Q Consensus 313 ~h~~~v~~~~~ 323 (347)
..-....|+.|
T Consensus 335 ~~~~~p~ci~f 345 (345)
T PF10282_consen 335 VPIPSPVCIVF 345 (345)
T ss_dssp EESSSEEEEEE
T ss_pred ccCCCCEEEeC
Confidence 12345667765
No 266
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=98.88 E-value=8.3e-09 Score=60.72 Aligned_cols=37 Identities=43% Similarity=0.737 Sum_probs=35.0
Q ss_pred eeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEe
Q 036314 111 SFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWR 147 (347)
Q Consensus 111 ~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd 147 (347)
++.++.+|..+|.+++|+|++.+|++++.|++|++||
T Consensus 3 ~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 3 CVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred EEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 5678899999999999999999999999999999996
No 267
>PRK01029 tolB translocation protein TolB; Provisional
Probab=98.81 E-value=1.8e-06 Score=79.68 Aligned_cols=197 Identities=14% Similarity=0.138 Sum_probs=105.5
Q ss_pred ccccceEEEEEeCCCCE---EEEeeCCCc--EEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEE
Q 036314 117 GHKASVHSIAAETSGNM---VCSGSWDCT--ISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSS 191 (347)
Q Consensus 117 ~h~~~V~~v~~s~~~~~---l~sgs~Dg~--I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 191 (347)
.....+.+=+|+|||+. ++..-.++. |.+.++..+.. ..+..+.+. ...
T Consensus 182 ~~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~-----------------------~~lt~~~g~---~~~ 235 (428)
T PRK01029 182 QEHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAG-----------------------KKILALQGN---QLM 235 (428)
T ss_pred cCCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCc-----------------------eEeecCCCC---ccc
Confidence 34445566689999974 234545554 44445543311 112222222 233
Q ss_pred EEe-CCCCeEEEEec-----CCcEEEEECCCC--ceeeeeeeC--eeeEEEEeeCCCCcEEEEecCCCcEEEEe--CCCC
Q 036314 192 VVW-PQQETIYSASW-----DHSVRTWDVEMG--KDLSDIFCG--KALNCIDIGGEGSALIAAGGSDPILRIWD--PRKP 259 (347)
Q Consensus 192 ~~~-~~~~~l~s~s~-----dg~v~vwd~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~la~~~~d~~i~iwd--~~~~ 259 (347)
..| |+++.|+..+. |-.+.+|++..+ .....+... .......|+|++..++.+...++...+|. +...
T Consensus 236 p~wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~ 315 (428)
T PRK01029 236 PTFSPRKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPE 315 (428)
T ss_pred eEECCCCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECccc
Confidence 456 67877765543 223445776643 122223222 12245678776665555554566555554 4321
Q ss_pred CCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCC--CcEEEEEcCCCccceeecCCCCeEEEEeecC-CCEEE-EccC-
Q 036314 260 GTSAPVFQFSSHNSWISACKWHNKSWFHLISASYD--GKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVI-SGGV- 334 (347)
Q Consensus 260 ~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D--~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~-s~s~- 334 (347)
+ .....+..+...+....|+|||..++.++..+ ..|.+||+.+++. ..+......+....|+| |+.|+ ++..
T Consensus 316 g--~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~-~~Lt~~~~~~~~p~wSpDG~~L~f~~~~~ 392 (428)
T PRK01029 316 G--QSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRD-YQLTTSPENKESPSWAIDSLHLVYSAGNS 392 (428)
T ss_pred c--cceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCe-EEccCCCCCccceEECCCCCEEEEEECCC
Confidence 1 12334445556677889999997644444333 3699999988764 33433334567788985 66654 3333
Q ss_pred -CceEEEee
Q 036314 335 -DSKLCVSS 342 (347)
Q Consensus 335 -D~~v~vw~ 342 (347)
...|.+++
T Consensus 393 g~~~L~~vd 401 (428)
T PRK01029 393 NESELYLIS 401 (428)
T ss_pred CCceEEEEE
Confidence 34566655
No 268
>KOG3914 consensus WD repeat protein WDR4 [Function unknown]
Probab=98.78 E-value=1.7e-07 Score=80.91 Aligned_cols=144 Identities=15% Similarity=0.112 Sum_probs=95.6
Q ss_pred CCCeEEEEecCCcEEEEECCCCce-eeee--e-eCeeeEEEEeeCCCCcEEEE--ecCCCcEEEEeCCCCCCCCCeEEec
Q 036314 196 QQETIYSASWDHSVRTWDVEMGKD-LSDI--F-CGKALNCIDIGGEGSALIAA--GGSDPILRIWDPRKPGTSAPVFQFS 269 (347)
Q Consensus 196 ~~~~l~s~s~dg~v~vwd~~~~~~-~~~~--~-~~~~~~~~~~~~~~~~~la~--~~~d~~i~iwd~~~~~~~~~~~~~~ 269 (347)
.++.+|.+..++...++++..... .+.+ . .....+.+.+...+...+++ .++...+.+|.... .. .....
T Consensus 73 ~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~-~~---~~~~l 148 (390)
T KOG3914|consen 73 SGRLVAVATSSKQRAVFDYRENPKGAKLLDVSCVPKRPTAISFIREDTSVLVADKAGDVYSFDILSADS-GR---CEPIL 148 (390)
T ss_pred CceEEEEEeCCCceEEEEEecCCCcceeeeEeecccCcceeeeeeccceEEEEeecCCceeeeeecccc-cC---cchhh
Confidence 455677777777776777654432 1111 1 12223333343333333222 23344455554432 22 23445
Q ss_pred CCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceee-cCCCCeEEEEeecCCCEEEEccCCceEEEeecc
Q 036314 270 SHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVI-DSHKDKVLCADWWRGDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 270 ~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~-~~h~~~v~~~~~~~~~~l~s~s~D~~v~vw~~~ 344 (347)
||-+-+.+|+|+||+. +++++..|..||+-.......+..| .||++-|..++.-+++.|+|||.|++|++|+-.
T Consensus 149 GhvSml~dVavS~D~~-~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~~~LlS~sGD~tlr~Wd~~ 223 (390)
T KOG3914|consen 149 GHVSMLLDVAVSPDDQ-FIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTDNYLLLSGSGDKTLRLWDIT 223 (390)
T ss_pred hhhhhhheeeecCCCC-EEEEecCCceEEEEecCcccchhhhccccHhheeeeeeccCceeeecCCCCcEEEEecc
Confidence 8999999999999984 7999999999999877655555555 589999999998888889999999999999865
No 269
>KOG2315 consensus Predicted translation initiation factor related to eIF-3a [Translation, ribosomal structure and biogenesis]
Probab=98.73 E-value=0.00011 Score=66.70 Aligned_cols=127 Identities=12% Similarity=0.249 Sum_probs=87.7
Q ss_pred CcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEec-CCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCC
Q 036314 207 HSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGG-SDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSW 285 (347)
Q Consensus 207 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~-~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~ 285 (347)
.++.+.++....+...+....++.++.|++.+..+.+..| -=.++.|||++. .+++.+ ..+.=+++-|+|.|.
T Consensus 251 q~Lyll~t~g~s~~V~L~k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr~----~~v~df--~egpRN~~~fnp~g~ 324 (566)
T KOG2315|consen 251 QTLYLLATQGESVSVPLLKEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLRG----KPVFDF--PEGPRNTAFFNPHGN 324 (566)
T ss_pred ceEEEEEecCceEEEecCCCCCceEEEECCCCCEEEEEEecccceEEEEcCCC----CEeEeC--CCCCccceEECCCCC
Confidence 3677888775455555555678999999887766554443 356899999974 235554 334456788999997
Q ss_pred eEEEEEeC---CCcEEEEEcCCCccceeecCCCCeEEEEeecC-CCEEEEccC------CceEEEee
Q 036314 286 FHLISASY---DGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGV------DSKLCVSS 342 (347)
Q Consensus 286 ~~l~s~s~---D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~------D~~v~vw~ 342 (347)
. |+-++. -|.+.+||+.+.+.+..+.. .+. +-++|+| |.+|.|+.. |+-++||.
T Consensus 325 i-i~lAGFGNL~G~mEvwDv~n~K~i~~~~a-~~t-t~~eW~PdGe~flTATTaPRlrvdNg~Kiwh 388 (566)
T KOG2315|consen 325 I-ILLAGFGNLPGDMEVWDVPNRKLIAKFKA-ANT-TVFEWSPDGEYFLTATTAPRLRVDNGIKIWH 388 (566)
T ss_pred E-EEEeecCCCCCceEEEeccchhhcccccc-CCc-eEEEEcCCCcEEEEEeccccEEecCCeEEEE
Confidence 6 444554 48999999998887887765 233 3459985 777766653 67788885
No 270
>KOG4532 consensus WD40-like repeat containing protein [General function prediction only]
Probab=98.73 E-value=4.4e-06 Score=68.83 Aligned_cols=208 Identities=14% Similarity=0.084 Sum_probs=127.0
Q ss_pred EEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEE-EeCCCCEEEEeeCCCcEEEEecCCCCCCCcccee
Q 036314 82 TVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIA-AETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSI 160 (347)
Q Consensus 82 ~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~-~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~ 160 (347)
.||.|+.-|+..+|...+++.. .+.-.-|...|.-+. +......+.-++.|.++++.+++-....
T Consensus 86 ~la~gG~~g~fd~~~~~tn~~h--------~~~cd~snn~v~~~~r~cd~~~~~~i~sndht~k~~~~~~~s~~------ 151 (344)
T KOG4532|consen 86 TLADGGASGQFDLFACNTNDGH--------LYQCDVSNNDVTLVKRYCDLKFPLNIASNDHTGKTMVVSGDSNK------ 151 (344)
T ss_pred EEEeccccceeeeecccCcccc--------eeeecccccchhhhhhhcccccceeeccCCcceeEEEEecCccc------
Confidence 6899999999999998765421 112223444333221 1112234556889999999987643210
Q ss_pred eeccCCCccccccccccccccccCCcc--ceEEEEe-CCCCeEEEEecCCcEEEEECCCC-ceeeeeee---CeeeEEEE
Q 036314 161 KKRKGNNQVEEPQLEGEAISTLVGHTQ--CVSSVVW-PQQETIYSASWDHSVRTWDVEMG-KDLSDIFC---GKALNCID 233 (347)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~h~~--~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~-~~~~~~~~---~~~~~~~~ 233 (347)
..-|.. .+.++++ +++..+++.+....|-.|.+... +.+..+.. ...-.+..
T Consensus 152 ---------------------~~~h~~~~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S 210 (344)
T KOG4532|consen 152 ---------------------FAVHNQNLTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNS 210 (344)
T ss_pred ---------------------ceeeccccceeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeee
Confidence 011221 1456666 46677888888888999988543 33333221 11234566
Q ss_pred eeCCCCcEEEEecCCCcEEEEeCCCCCCCCC--eEEecCCCCCeeEEEeCCCCCeEEEEEe-CCCcEEEEEcCCCcccee
Q 036314 234 IGGEGSALIAAGGSDPILRIWDPRKPGTSAP--VFQFSSHNSWISACKWHNKSWFHLISAS-YDGKVMLWDLRTAWPLSV 310 (347)
Q Consensus 234 ~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~--~~~~~~h~~~v~~v~~s~~~~~~l~s~s-~D~~i~lwd~~~~~~~~~ 310 (347)
|+..+ ..+|++.+||++.|||+|..+.+.. ..+-..|.+.+..|.|+|.|..-|+=-+ .-+.+.|-|+|+....+.
T Consensus 211 ~s~~~-~~FAv~~Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~~q~ 289 (344)
T KOG4532|consen 211 FSEND-LQFAVVFQDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVNHQV 289 (344)
T ss_pred eccCc-ceEEEEecCCcEEEEEecccccchhhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCceeeE
Confidence 65544 5789999999999999986543311 1233568889999999987653333333 347899999998765544
Q ss_pred ec-------CCC-CeEEEEeecC
Q 036314 311 ID-------SHK-DKVLCADWWR 325 (347)
Q Consensus 311 ~~-------~h~-~~v~~~~~~~ 325 (347)
+. -|. ..+.+..|++
T Consensus 290 I~i~~d~~~~~~tq~ifgt~f~~ 312 (344)
T KOG4532|consen 290 IVIPDDVERKHNTQHIFGTNFNN 312 (344)
T ss_pred EecCccccccccccccccccccC
Confidence 32 232 2366777763
No 271
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=98.72 E-value=1.8e-05 Score=80.66 Aligned_cols=261 Identities=11% Similarity=0.072 Sum_probs=142.1
Q ss_pred EEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccce-e--ee-eeccccceEEEEEeCCCCEEE-EeeCCCcE
Q 036314 69 SVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRS-F--KI-LRGHKASVHSIAAETSGNMVC-SGSWDCTI 143 (347)
Q Consensus 69 ~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~-~--~~-~~~h~~~V~~v~~s~~~~~l~-sgs~Dg~I 143 (347)
.+++.+.++ ...++-+..+.|++||............... . .. -.++-.....++++++++.|+ +-...+.|
T Consensus 572 gvavd~~~g---~lyVaDs~n~rI~v~d~~G~~i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~n~~I 648 (1057)
T PLN02919 572 KLAIDLLNN---RLFISDSNHNRIVVTDLDGNFIVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADTENHAL 648 (1057)
T ss_pred eEEEECCCC---eEEEEECCCCeEEEEeCCCCEEEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeCCCceE
Confidence 455554322 3567778888999999764321100000000 0 00 001112346789998887554 44556789
Q ss_pred EEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeC--CCCeEEEEecCCcEEEEECCCCceee
Q 036314 144 SLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP--QQETIYSASWDHSVRTWDVEMGKDLS 221 (347)
Q Consensus 144 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~l~s~s~dg~v~vwd~~~~~~~~ 221 (347)
+++|..+... ......+.. .....+.......... .-..+++. ++..+++.+.++.|++||..++...
T Consensus 649 r~id~~~~~V-----~tlag~G~~---g~~~~gg~~~~~~~ln-~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~- 718 (1057)
T PLN02919 649 REIDFVNETV-----RTLAGNGTK---GSDYQGGKKGTSQVLN-SPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTR- 718 (1057)
T ss_pred EEEecCCCEE-----EEEeccCcc---cCCCCCChhhhHhhcC-CCeEEEEecCCCeEEEEECCCCeEEEEECCCCeEE-
Confidence 9998764311 000000000 0000000000000000 11356663 3445567778889999998776432
Q ss_pred eeee----------------CeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCC----------CCeEEecCC----
Q 036314 222 DIFC----------------GKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTS----------APVFQFSSH---- 271 (347)
Q Consensus 222 ~~~~----------------~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~----------~~~~~~~~h---- 271 (347)
.+.. -.....+++++++..++++...++.|++||+...... .....+..+
T Consensus 719 ~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g 798 (1057)
T PLN02919 719 VFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVG 798 (1057)
T ss_pred EEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCch
Confidence 1110 0123457887776667778888899999998643210 000111101
Q ss_pred ----CCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecC--------------CCCeEEEEeec-CCCEEEEc
Q 036314 272 ----NSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDS--------------HKDKVLCADWW-RGDSVISG 332 (347)
Q Consensus 272 ----~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~--------------h~~~v~~~~~~-~~~~l~s~ 332 (347)
...-..++++++|. ++++-+.+++|++||.+++... ++.+ +-....++++. +|+.+++-
T Consensus 799 ~~~~l~~P~Gvavd~dG~-LYVADs~N~rIrviD~~tg~v~-tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaD 876 (1057)
T PLN02919 799 SEVLLQHPLGVLCAKDGQ-IYVADSYNHKIKKLDPATKRVT-TLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVAD 876 (1057)
T ss_pred hhhhccCCceeeEeCCCc-EEEEECCCCEEEEEECCCCeEE-EEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEE
Confidence 01234688899885 5777888999999999876533 2221 12246678886 57778888
Q ss_pred cCCceEEEeecc
Q 036314 333 GVDSKLCVSSGV 344 (347)
Q Consensus 333 s~D~~v~vw~~~ 344 (347)
+.+++|++|+..
T Consensus 877 t~Nn~Irvid~~ 888 (1057)
T PLN02919 877 TNNSLIRYLDLN 888 (1057)
T ss_pred CCCCEEEEEECC
Confidence 899999999864
No 272
>KOG2041 consensus WD40 repeat protein [General function prediction only]
Probab=98.69 E-value=1.3e-06 Score=81.00 Aligned_cols=240 Identities=16% Similarity=0.193 Sum_probs=146.5
Q ss_pred CceEEEEEeecCCCceEEEEEccCCCcEEEEecccccc------ccCccccceeeeeeccccceEEEEEeCCCCEEEEee
Q 036314 65 GAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEEL------VNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGS 138 (347)
Q Consensus 65 ~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~------~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs 138 (347)
....++.|....+ ++|+|+.||.+|+-.+.+.+. ++.+.....-+++.||+..|.-+.|+...+.|-|..
T Consensus 15 vkL~c~~WNke~g----yIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSD 90 (1189)
T KOG2041|consen 15 VKLHCAEWNKESG----YIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSD 90 (1189)
T ss_pred ceEEEEEEcccCC----eEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccC
Confidence 4567888876444 799999999999998865431 111222334467899999999999999999999999
Q ss_pred CCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeC-CCCeEEEEecCCcEEEEECCCC
Q 036314 139 WDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP-QQETIYSASWDHSVRTWDVEMG 217 (347)
Q Consensus 139 ~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~l~s~s~dg~v~vwd~~~~ 217 (347)
.+|-|.+|-+-.+....+.. -......|.++.|. +|..++....||.|.+=.+..+
T Consensus 91 t~GlIiVWmlykgsW~EEMi-----------------------NnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGN 147 (1189)
T KOG2041|consen 91 TSGLIIVWMLYKGSWCEEMI-----------------------NNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGN 147 (1189)
T ss_pred CCceEEEEeeecccHHHHHh-----------------------hCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeeccc
Confidence 99999999765432110000 00122457788884 7778888888888776544332
Q ss_pred ceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCC----CeEE----ecCCCCCeeEEEeC--------
Q 036314 218 KDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSA----PVFQ----FSSHNSWISACKWH-------- 281 (347)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~----~~~~----~~~h~~~v~~v~~s-------- 281 (347)
+.-.+-..+.....+.++++ ...+..+-..|.+++||.......+ .... ++.....|..+.|.
T Consensus 148 RIwgKeLkg~~l~hv~ws~D-~~~~Lf~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~~~~v~ 226 (1189)
T KOG2041|consen 148 RIWGKELKGQLLAHVLWSED-LEQALFKKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTGPYQPVP 226 (1189)
T ss_pred eecchhcchheccceeeccc-HHHHHhhhcCCcEEEecccccHHHhhhhceEEeeeeeecCCCccccceeeccCccccCC
Confidence 21111111112234455444 3455567778999999965321000 0011 11111124444443
Q ss_pred CCCCeEEEEEeCCCcEEEEEcCC-CccceeecCCCCeEEEEeec-CCCEEEEccCC
Q 036314 282 NKSWFHLISASYDGKVMLWDLRT-AWPLSVIDSHKDKVLCADWW-RGDSVISGGVD 335 (347)
Q Consensus 282 ~~~~~~l~s~s~D~~i~lwd~~~-~~~~~~~~~h~~~v~~~~~~-~~~~l~s~s~D 335 (347)
|+.+ .||.+-.+|.+.|-.-.. .+|+..-.+ -.+.+..|+ +|..||.+|.|
T Consensus 227 pdrP-~lavcy~nGr~QiMR~eND~~Pvv~dtg--m~~vgakWnh~G~vLAvcG~~ 279 (1189)
T KOG2041|consen 227 PDRP-RLAVCYANGRMQIMRSENDPEPVVVDTG--MKIVGAKWNHNGAVLAVCGND 279 (1189)
T ss_pred CCCC-EEEEEEcCceehhhhhcCCCCCeEEecc--cEeecceecCCCcEEEEccCc
Confidence 4554 599999999998875443 333332223 567888896 57788888765
No 273
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=98.64 E-value=0.00016 Score=62.39 Aligned_cols=276 Identities=12% Similarity=0.165 Sum_probs=155.6
Q ss_pred CeEEEEcCC---Ce-EEEEeeccCCceEEEEEeecCCCceEEEEEcc---CCCcEEEEeccc--cccccCccccceeeee
Q 036314 45 NLGRVWKAG---GV-CTHILEGHCGAVSSVNIIKSDGLKYVTVATAS---KDQTLRLWKFDA--EELVNHPKKIRSFKIL 115 (347)
Q Consensus 45 ~~i~iw~~~---~~-~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s---~Dg~v~~wd~~~--~~~~~~~~~~~~~~~~ 115 (347)
.-|++|++. |. ....+..+.+.++-|+|.++.. .|.++- .+|.|..|.++. +++... ....+
T Consensus 16 ~gI~v~~ld~~~g~l~~~~~v~~~~nptyl~~~~~~~----~LY~v~~~~~~ggvaay~iD~~~G~Lt~l-----n~~~~ 86 (346)
T COG2706 16 QGIYVFNLDTKTGELSLLQLVAELGNPTYLAVNPDQR----HLYVVNEPGEEGGVAAYRIDPDDGRLTFL-----NRQTL 86 (346)
T ss_pred CceEEEEEeCcccccchhhhccccCCCceEEECCCCC----EEEEEEecCCcCcEEEEEEcCCCCeEEEe-----ecccc
Confidence 468899864 22 2223445667778899988543 455553 357788888874 433211 01122
Q ss_pred eccccceEEEEEeCCCCEEEEeeCC-CcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe
Q 036314 116 RGHKASVHSIAAETSGNMVCSGSWD-CTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW 194 (347)
Q Consensus 116 ~~h~~~V~~v~~s~~~~~l~sgs~D-g~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 194 (347)
.+ .+-.-++++++|+++++++.. |.|.++.+.............+.... +.-.+.-..| +...-+
T Consensus 87 ~g--~~p~yvsvd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~---------~p~~rQ~~~h---~H~a~~ 152 (346)
T COG2706 87 PG--SPPCYVSVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGS---------GPHERQESPH---VHSANF 152 (346)
T ss_pred CC--CCCeEEEECCCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCC---------CCCccccCCc---cceeee
Confidence 23 223668999999999988764 78999988654322221111110000 0000111122 222333
Q ss_pred -CCCCeEEEEecC-CcEEEEECCCCceee----eeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCC-CCCCCeEE
Q 036314 195 -PQQETIYSASWD-HSVRTWDVEMGKDLS----DIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKP-GTSAPVFQ 267 (347)
Q Consensus 195 -~~~~~l~s~s~d-g~v~vwd~~~~~~~~----~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~-~~~~~~~~ 267 (347)
|++++|++.... -.|.+|++..+.... .+..+....-+.|+|++.-..+.+-.+++|.+|..... +....++.
T Consensus 153 tP~~~~l~v~DLG~Dri~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~ 232 (346)
T COG2706 153 TPDGRYLVVPDLGTDRIFLYDLDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQT 232 (346)
T ss_pred CCCCCEEEEeecCCceEEEEEcccCccccccccccCCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeee
Confidence 677787766332 258899998775432 22334567789998877655566777999999987653 11111211
Q ss_pred e---c---CCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCc-ccee---ecCCCCeEEEEeecC-CCEEEEccC-C
Q 036314 268 F---S---SHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAW-PLSV---IDSHKDKVLCADWWR-GDSVISGGV-D 335 (347)
Q Consensus 268 ~---~---~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~-~~~~---~~~h~~~v~~~~~~~-~~~l~s~s~-D 335 (347)
+ . ....+..++..+|+|+.+-|+=-....|-++.+.... .+.. ...|.-.-+...+++ |+.|+.++. +
T Consensus 233 i~tlP~dF~g~~~~aaIhis~dGrFLYasNRg~dsI~~f~V~~~~g~L~~~~~~~teg~~PR~F~i~~~g~~Liaa~q~s 312 (346)
T COG2706 233 IDTLPEDFTGTNWAAAIHISPDGRFLYASNRGHDSIAVFSVDPDGGKLELVGITPTEGQFPRDFNINPSGRFLIAANQKS 312 (346)
T ss_pred eccCccccCCCCceeEEEECCCCCEEEEecCCCCeEEEEEEcCCCCEEEEEEEeccCCcCCccceeCCCCCEEEEEccCC
Confidence 1 1 1234678899999997533333345588888776531 1221 122222257778865 667777775 4
Q ss_pred ceEEEeec
Q 036314 336 SKLCVSSG 343 (347)
Q Consensus 336 ~~v~vw~~ 343 (347)
.+|.|++-
T Consensus 313 d~i~vf~~ 320 (346)
T COG2706 313 DNITVFER 320 (346)
T ss_pred CcEEEEEE
Confidence 56777653
No 274
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=98.63 E-value=8.8e-08 Score=56.26 Aligned_cols=39 Identities=28% Similarity=0.622 Sum_probs=34.8
Q ss_pred CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEe
Q 036314 54 GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWK 96 (347)
Q Consensus 54 ~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd 96 (347)
+++++.+.+|++.|.+|+|+|++ ..|++++.|++|++||
T Consensus 1 g~~~~~~~~h~~~i~~i~~~~~~----~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 1 GKCVRTFRGHSSSINSIAWSPDG----NFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEEESSSSSEEEEEEETTS----SEEEEEETTSEEEEEE
T ss_pred CeEEEEEcCCCCcEEEEEEeccc----ccceeeCCCCEEEEEC
Confidence 35788999999999999999964 3799999999999997
No 275
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=98.62 E-value=5.7e-05 Score=68.83 Aligned_cols=260 Identities=14% Similarity=0.050 Sum_probs=140.0
Q ss_pred CCEEEEEecCCeEEEEcC-CCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceee
Q 036314 35 PGFILTGCYDNLGRVWKA-GGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFK 113 (347)
Q Consensus 35 ~~~l~sg~~d~~i~iw~~-~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~ 113 (347)
++.++.++.++.+..+|. .|+.+..+.-........... + ..++.++.|+.+..+|..+++..-..
T Consensus 65 ~~~v~v~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~p~v~--~----~~v~v~~~~g~l~ald~~tG~~~W~~------- 131 (377)
T TIGR03300 65 GGKVYAADADGTVVALDAETGKRLWRVDLDERLSGGVGAD--G----GLVFVGTEKGEVIALDAEDGKELWRA------- 131 (377)
T ss_pred CCEEEEECCCCeEEEEEccCCcEeeeecCCCCcccceEEc--C----CEEEEEcCCCEEEEEECCCCcEeeee-------
Confidence 567888889999999995 576655443332211222221 2 24677889999999998877642110
Q ss_pred eeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEE
Q 036314 114 ILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVV 193 (347)
Q Consensus 114 ~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 193 (347)
.+ ...+.+...- .+..++.++.|+.+..||.++++...+.. .. .....+.....+ .
T Consensus 132 ~~---~~~~~~~p~v-~~~~v~v~~~~g~l~a~d~~tG~~~W~~~------~~----------~~~~~~~~~~sp----~ 187 (377)
T TIGR03300 132 KL---SSEVLSPPLV-ANGLVVVRTNDGRLTALDAATGERLWTYS------RV----------TPALTLRGSASP----V 187 (377)
T ss_pred cc---CceeecCCEE-ECCEEEEECCCCeEEEEEcCCCceeeEEc------cC----------CCceeecCCCCC----E
Confidence 01 1112211111 24466667889999999987654311100 00 000000000011 1
Q ss_pred eCCCCeEEEEecCCcEEEEECCCCceeeeeeeCee-----------e-EEEEeeCCCCcEEEEecCCCcEEEEeCCCCCC
Q 036314 194 WPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKA-----------L-NCIDIGGEGSALIAAGGSDPILRIWDPRKPGT 261 (347)
Q Consensus 194 ~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~-----------~-~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~ 261 (347)
. .++.++.+..++.+..+|.++++.+-......+ + ....+ .++ .+..++.++.++.||++..+
T Consensus 188 ~-~~~~v~~~~~~g~v~ald~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~p~~--~~~-~vy~~~~~g~l~a~d~~tG~- 262 (377)
T TIGR03300 188 I-ADGGVLVGFAGGKLVALDLQTGQPLWEQRVALPKGRTELERLVDVDGDPVV--DGG-QVYAVSYQGRVAALDLRSGR- 262 (377)
T ss_pred E-ECCEEEEECCCCEEEEEEccCCCEeeeeccccCCCCCchhhhhccCCccEE--ECC-EEEEEEcCCEEEEEECCCCc-
Confidence 1 134677778889999999988875432211100 0 01111 122 45566778999999986432
Q ss_pred CCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEE-EEeecCCCEEEEccCCceEEE
Q 036314 262 SAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVL-CADWWRGDSVISGGVDSKLCV 340 (347)
Q Consensus 262 ~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~-~~~~~~~~~l~s~s~D~~v~v 340 (347)
.+.... ... ...... .+. .+..++.||.+..+|..+++.+-....-.+... +... .+..|..++.||.|.+
T Consensus 263 --~~W~~~-~~~-~~~p~~--~~~-~vyv~~~~G~l~~~d~~tG~~~W~~~~~~~~~~ssp~i-~g~~l~~~~~~G~l~~ 334 (377)
T TIGR03300 263 --VLWKRD-ASS-YQGPAV--DDN-RLYVTDADGVVVALDRRSGSELWKNDELKYRQLTAPAV-VGGYLVVGDFEGYLHW 334 (377)
T ss_pred --EEEeec-cCC-ccCceE--eCC-EEEEECCCCeEEEEECCCCcEEEccccccCCccccCEE-ECCEEEEEeCCCEEEE
Confidence 122222 111 112222 233 477788999999999998875533321111111 1111 3667888889999998
Q ss_pred eecc
Q 036314 341 SSGV 344 (347)
Q Consensus 341 w~~~ 344 (347)
++..
T Consensus 335 ~d~~ 338 (377)
T TIGR03300 335 LSRE 338 (377)
T ss_pred EECC
Confidence 8753
No 276
>KOG2695 consensus WD40 repeat protein [General function prediction only]
Probab=98.57 E-value=2e-07 Score=79.10 Aligned_cols=161 Identities=14% Similarity=0.164 Sum_probs=110.8
Q ss_pred CEEEEEecCCeEEEEcCCCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeee
Q 036314 36 GFILTGCYDNLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKIL 115 (347)
Q Consensus 36 ~~l~sg~~d~~i~iw~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~ 115 (347)
++-++.|.+-.|-+=|..+...+.|. ....|.++.|...++ .|..|...|.|-..|+..... -+. .+...+
T Consensus 225 gyhfs~G~sqqv~L~nvetg~~qsf~-sksDVfAlQf~~s~n----Lv~~GcRngeI~~iDLR~rnq---G~~-~~a~rl 295 (425)
T KOG2695|consen 225 GYHFSVGLSQQVLLTNVETGHQQSFQ-SKSDVFALQFAGSDN----LVFNGCRNGEIFVIDLRCRNQ---GNG-WCAQRL 295 (425)
T ss_pred eeeecccccceeEEEEeecccccccc-cchhHHHHHhcccCC----eeEecccCCcEEEEEeeeccc---CCC-cceEEE
Confidence 34466667777777776554545555 556799999987554 588999999999999864311 111 122222
Q ss_pred eccccceEEEEEeC-CCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe
Q 036314 116 RGHKASVHSIAAET-SGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW 194 (347)
Q Consensus 116 ~~h~~~V~~v~~s~-~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 194 (347)
-|...|+++..-. +++.|.+.+.+|+|++||++-..+ +.-+.++.||...-.-+-+
T Consensus 296 -yh~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~----------------------~~~V~qYeGHvN~~a~l~~ 352 (425)
T KOG2695|consen 296 -YHDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRATKC----------------------KKSVMQYEGHVNLSAYLPA 352 (425)
T ss_pred -EcCcchhhhhhhccccceEeeccCcCceeEeeehhhhc----------------------ccceeeeeccccccccccc
Confidence 3889999997655 778999999999999999864321 1225567777533222211
Q ss_pred ---CCCCeEEEEecCCcEEEEECCCCceeeeeeeCee
Q 036314 195 ---PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKA 228 (347)
Q Consensus 195 ---~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~ 228 (347)
+....+++++.|...|+|.+..+..+.++.....
T Consensus 353 ~v~~eeg~I~s~GdDcytRiWsl~~ghLl~tipf~~s 389 (425)
T KOG2695|consen 353 HVKEEEGSIFSVGDDCYTRIWSLDSGHLLCTIPFPYS 389 (425)
T ss_pred ccccccceEEEccCeeEEEEEecccCceeeccCCCCc
Confidence 3456788999999999999999988887765543
No 277
>KOG2695 consensus WD40 repeat protein [General function prediction only]
Probab=98.55 E-value=5.7e-07 Score=76.44 Aligned_cols=137 Identities=11% Similarity=0.169 Sum_probs=93.9
Q ss_pred cceEEEEeC-CCCeEEEEecCCcEEEEECCCC-----ceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCC
Q 036314 187 QCVSSVVWP-QQETIYSASWDHSVRTWDVEMG-----KDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPG 260 (347)
Q Consensus 187 ~~v~~~~~~-~~~~l~s~s~dg~v~vwd~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~ 260 (347)
..|.++.|. .++.++.|..+|.|-..|++.. .+...+.++..++++..-.-+...+++.+-+|+|++||+|...
T Consensus 253 sDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rlyh~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K 332 (425)
T KOG2695|consen 253 SDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRLYHDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRATK 332 (425)
T ss_pred hhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEEEcCcchhhhhhhccccceEeeccCcCceeEeeehhhh
Confidence 345555554 3678889999999999999865 2344455666677765543234466667779999999998654
Q ss_pred CCCCeEEecCCCCCeeEEE--eCCCCCeEEEEEeCCCcEEEEEcCCCccceeec----CCCCeEEEEeec
Q 036314 261 TSAPVFQFSSHNSWISACK--WHNKSWFHLISASYDGKVMLWDLRTAWPLSVID----SHKDKVLCADWW 324 (347)
Q Consensus 261 ~~~~~~~~~~h~~~v~~v~--~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~----~h~~~v~~~~~~ 324 (347)
....+.++.||-+.-.-+- ..+.. ..+++++.|.-.|||.++.+..+.++. .-...+++++|.
T Consensus 333 ~~~~V~qYeGHvN~~a~l~~~v~~ee-g~I~s~GdDcytRiWsl~~ghLl~tipf~~s~~e~d~~sv~~~ 401 (425)
T KOG2695|consen 333 CKKSVMQYEGHVNLSAYLPAHVKEEE-GSIFSVGDDCYTRIWSLDSGHLLCTIPFPYSASEVDIPSVAFD 401 (425)
T ss_pred cccceeeeeccccccccccccccccc-ceEEEccCeeEEEEEecccCceeeccCCCCccccccccceehh
Confidence 4445788999976433222 33444 368889999999999999887665542 223456777773
No 278
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=98.55 E-value=0.00037 Score=70.09 Aligned_cols=276 Identities=14% Similarity=0.152 Sum_probs=148.7
Q ss_pred EEEEEecCC--eEEEEcCC--C--eEEEEee-----ccCCceEEEEEeecCCCceEEEEEccCCCcEEEE----eccccc
Q 036314 37 FILTGCYDN--LGRVWKAG--G--VCTHILE-----GHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLW----KFDAEE 101 (347)
Q Consensus 37 ~l~sg~~d~--~i~iw~~~--~--~~~~~l~-----~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~w----d~~~~~ 101 (347)
+++++.... .|.+.... + ..+..+. ...+.|.++.+.++.. .++.+..+|.|-+. +....+
T Consensus 37 ~~~~~~~~~~~~i~~~~~~~~~~~~~l~s~~~~~~~~~~~~ivs~~yl~d~~----~l~~~~~~Gdi~~~~~~~~~~~~~ 112 (928)
T PF04762_consen 37 YFVLGPNEIDYVIELDRFSQDGSVEVLASWDAPLPDDPNDKIVSFQYLADSE----SLCIALASGDIILVREDPDPDEDE 112 (928)
T ss_pred EEEECCCCcceEEEEEeeccCCceeEEEeccccCCcCCCCcEEEEEeccCCC----cEEEEECCceEEEEEccCCCCCce
Confidence 566665554 34454322 2 1233333 3457899999888543 47778888999998 433321
Q ss_pred cccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCC----------CC--ccceeeeccCCCcc
Q 036314 102 LVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDA----------AG--NQVSIKKRKGNNQV 169 (347)
Q Consensus 102 ~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~----------~~--~~~~~~~~~~~~~~ 169 (347)
......-..+|.+++||||+.+++-...++++.+-+.. .+. .+ ..+.+ ..+ -
T Consensus 113 ----------~E~VG~vd~GI~a~~WSPD~Ella~vT~~~~l~~mt~~-fd~i~E~~l~~~~~~~~~~VsV--GWG---k 176 (928)
T PF04762_consen 113 ----------IEIVGSVDSGILAASWSPDEELLALVTGEGNLLLMTRD-FDPISEVPLDSDDFGESKHVSV--GWG---K 176 (928)
T ss_pred ----------eEEEEEEcCcEEEEEECCCcCEEEEEeCCCEEEEEecc-ceEEEEeecCccccCCCceeee--ccC---c
Confidence 12223347789999999999999988888888876422 110 00 01110 000 0
Q ss_pred ccccccccc-----------------cccccCCccceEEEEe-CCCCeEEEEec------CCcEEEEECCCCceeeeeee
Q 036314 170 EEPQLEGEA-----------------ISTLVGHTQCVSSVVW-PQQETIYSASW------DHSVRTWDVEMGKDLSDIFC 225 (347)
Q Consensus 170 ~~~~~~~~~-----------------~~~~~~h~~~v~~~~~-~~~~~l~s~s~------dg~v~vwd~~~~~~~~~~~~ 225 (347)
.+.++.|+. ...+. +.+.-..++| .||++++..+. -+.+|||+-+ |.....-..
T Consensus 177 KeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s-~dd~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~Re-G~L~stSE~ 254 (928)
T PF04762_consen 177 KETQFHGSAGKAAARQLRDPTVPKVDEGKLS-WDDGRVRISWRGDGEYFAVSSVEPETGSRRVIRVYSRE-GELQSTSEP 254 (928)
T ss_pred ccCccCcchhhhhhhhccCCCCCccccCccc-cCCCceEEEECCCCcEEEEEEEEcCCCceeEEEEECCC-ceEEecccc
Confidence 011111111 11222 3334456888 48888877664 2579999844 543322211
Q ss_pred -CeeeEEEEeeCCCCcEEEEecC---CCcEEEEeCCCCCCCCCeEEec--CCCCCeeEEEeCCCCCeEEEEEeCCCcEEE
Q 036314 226 -GKALNCIDIGGEGSALIAAGGS---DPILRIWDPRKPGTSAPVFQFS--SHNSWISACKWHNKSWFHLISASYDGKVML 299 (347)
Q Consensus 226 -~~~~~~~~~~~~~~~~la~~~~---d~~i~iwd~~~~~~~~~~~~~~--~h~~~v~~v~~s~~~~~~l~s~s~D~~i~l 299 (347)
..--.+++|-| .+++||+.-. ...|.+|..... +. -.+.+. .....|..+.||+++. .||.--.| .|.+
T Consensus 255 v~gLe~~l~WrP-sG~lIA~~q~~~~~~~VvFfErNGL-rh-geF~l~~~~~~~~v~~l~Wn~ds~-iLAv~~~~-~vqL 329 (928)
T PF04762_consen 255 VDGLEGALSWRP-SGNLIASSQRLPDRHDVVFFERNGL-RH-GEFTLRFDPEEEKVIELAWNSDSE-ILAVWLED-RVQL 329 (928)
T ss_pred CCCccCCccCCC-CCCEEEEEEEcCCCcEEEEEecCCc-Ee-eeEecCCCCCCceeeEEEECCCCC-EEEEEecC-CceE
Confidence 11124577755 4567776532 467778864321 11 123333 3455789999999985 46665544 4999
Q ss_pred EEcCCC--ccceeecC-CCCeEEEEeecC--CCEEEEccCCceEE
Q 036314 300 WDLRTA--WPLSVIDS-HKDKVLCADWWR--GDSVISGGVDSKLC 339 (347)
Q Consensus 300 wd~~~~--~~~~~~~~-h~~~v~~~~~~~--~~~l~s~s~D~~v~ 339 (347)
|-..+- -.-+.+.. ....+..+.|+| ..+|.....++.+.
T Consensus 330 Wt~~NYHWYLKqei~~~~~~~~~~~~Wdpe~p~~L~v~t~~g~~~ 374 (928)
T PF04762_consen 330 WTRSNYHWYLKQEIRFSSSESVNFVKWDPEKPLRLHVLTSNGQYE 374 (928)
T ss_pred EEeeCCEEEEEEEEEccCCCCCCceEECCCCCCEEEEEecCCcEE
Confidence 976542 11122221 122344477765 33444444444443
No 279
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=98.54 E-value=0.00057 Score=60.75 Aligned_cols=262 Identities=8% Similarity=0.001 Sum_probs=132.1
Q ss_pred CeEEEEcCC-CeEEEEee-ccCCceEEEEEeecCCCceEEEEEcc---------CCCcEEEEeccccccccCcccc-cee
Q 036314 45 NLGRVWKAG-GVCTHILE-GHCGAVSSVNIIKSDGLKYVTVATAS---------KDQTLRLWKFDAEELVNHPKKI-RSF 112 (347)
Q Consensus 45 ~~i~iw~~~-~~~~~~l~-~h~~~V~~v~~~~~~~~~~~~l~s~s---------~Dg~v~~wd~~~~~~~~~~~~~-~~~ 112 (347)
++|.+.|.. .+.+..+. |.... .+ ++|++. ...++.+ .+..|.+||..+.+........ .+.
T Consensus 27 ~~v~ViD~~~~~v~g~i~~G~~P~--~~-~spDg~---~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~ 100 (352)
T TIGR02658 27 TQVYTIDGEAGRVLGMTDGGFLPN--PV-VASDGS---FFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPR 100 (352)
T ss_pred ceEEEEECCCCEEEEEEEccCCCc--ee-ECCCCC---EEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCch
Confidence 788888864 34444444 22222 23 677543 2334445 6789999999877643211000 000
Q ss_pred eeeeccccceEEEEEeCCCCEEEEee-C-CCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceE
Q 036314 113 KILRGHKASVHSIAAETSGNMVCSGS-W-DCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVS 190 (347)
Q Consensus 113 ~~~~~h~~~V~~v~~s~~~~~l~sgs-~-Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 190 (347)
+. ....-..+++++||++++... . +..|.+.|+........ +.- .++..
T Consensus 101 --~~-~~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~e-------------------------i~v-p~~~~ 151 (352)
T TIGR02658 101 --FL-VGTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRM-------------------------MDV-PDCYH 151 (352)
T ss_pred --hh-ccCccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEE-------------------------EeC-CCCcE
Confidence 00 011223578999999998766 3 68999999886532111 100 00111
Q ss_pred EEEeCCCCeEEEEecCCcEEEEECCC-Cce-eee--eeeC--eee-EEEEeeCCCCcEEEEecCCCcEEEEeCCCCCC--
Q 036314 191 SVVWPQQETIYSASWDHSVRTWDVEM-GKD-LSD--IFCG--KAL-NCIDIGGEGSALIAAGGSDPILRIWDPRKPGT-- 261 (347)
Q Consensus 191 ~~~~~~~~~l~s~s~dg~v~vwd~~~-~~~-~~~--~~~~--~~~-~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~-- 261 (347)
-...++.... .-+.||......+.. ++. ... ++.. .++ ..-.+.+.++..+....+ |+|.+.|+...+.
T Consensus 152 vy~t~e~~~~-~~~~Dg~~~~v~~d~~g~~~~~~~~vf~~~~~~v~~rP~~~~~dg~~~~vs~e-G~V~~id~~~~~~~~ 229 (352)
T TIGR02658 152 IFPTANDTFF-MHCRDGSLAKVGYGTKGNPKIKPTEVFHPEDEYLINHPAYSNKSGRLVWPTYT-GKIFQIDLSSGDAKF 229 (352)
T ss_pred EEEecCCccE-EEeecCceEEEEecCCCceEEeeeeeecCCccccccCCceEcCCCcEEEEecC-CeEEEEecCCCccee
Confidence 0111111111 112333333322211 110 000 1111 000 000123323444444444 9999999643211
Q ss_pred CCCeEEecC-------CCCCeeEEEeCCCCCeEEEEEe---------CCCcEEEEEcCCCccceeecCCCCeEEEEeecC
Q 036314 262 SAPVFQFSS-------HNSWISACKWHNKSWFHLISAS---------YDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR 325 (347)
Q Consensus 262 ~~~~~~~~~-------h~~~v~~v~~s~~~~~~l~s~s---------~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~ 325 (347)
..+...+.. ......-++++|++.++++... ..+.|.++|..+++.+..+.- ...++.+++++
T Consensus 230 ~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~v-G~~~~~iavS~ 308 (352)
T TIGR02658 230 LPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIEL-GHEIDSINVSQ 308 (352)
T ss_pred cceeeeccccccccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCCeEEEEEeC-CCceeeEEECC
Confidence 111111111 1122344899999987655442 125799999999988887653 34789999985
Q ss_pred -CC-EEE-EccCCceEEEeecc
Q 036314 326 -GD-SVI-SGGVDSKLCVSSGV 344 (347)
Q Consensus 326 -~~-~l~-s~s~D~~v~vw~~~ 344 (347)
++ +|. +...++.|.|.+.-
T Consensus 309 Dgkp~lyvtn~~s~~VsViD~~ 330 (352)
T TIGR02658 309 DAKPLLYALSTGDKTLYIFDAE 330 (352)
T ss_pred CCCeEEEEeCCCCCcEEEEECc
Confidence 55 544 54468889888764
No 280
>KOG1354 consensus Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=98.52 E-value=3.4e-06 Score=71.79 Aligned_cols=215 Identities=13% Similarity=0.216 Sum_probs=127.4
Q ss_pred ccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeC-CC
Q 036314 119 KASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP-QQ 197 (347)
Q Consensus 119 ~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~ 197 (347)
.+-|.+|.|..+|.+|++|..+|.|-++.-+.... +... .....+..++ +...+.++. -...|..+.|- ++
T Consensus 25 adiis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~-~ey~----~~t~fqshep--EFDYLkSle-ieEKinkIrw~~~~ 96 (433)
T KOG1354|consen 25 ADIISAVEFDHYGERLATGDKGGRVVLFEREKLYK-GEYN----FQTEFQSHEP--EFDYLKSLE-IEEKINKIRWLDDG 96 (433)
T ss_pred hcceeeEEeecccceEeecCCCCeEEEeecccccc-ccee----eeeeeeccCc--ccchhhhhh-hhhhhhhceecCCC
Confidence 44577899999999999999999999996443211 0000 0000000000 001111111 12356667773 32
Q ss_pred --CeEEEEecCCcEEEEECCCCceee---------------eee----------------------eCeeeEEEEeeCCC
Q 036314 198 --ETIYSASWDHSVRTWDVEMGKDLS---------------DIF----------------------CGKALNCIDIGGEG 238 (347)
Q Consensus 198 --~~l~s~s~dg~v~vwd~~~~~~~~---------------~~~----------------------~~~~~~~~~~~~~~ 238 (347)
..++....|++|++|-+.....-. .+. +..-++.+.+.++.
T Consensus 97 n~a~FLlstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~ 176 (433)
T KOG1354|consen 97 NLAEFLLSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDK 176 (433)
T ss_pred CccEEEEecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCcc
Confidence 346666789999999874321100 000 00124456665544
Q ss_pred CcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCC-----CCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccc----e
Q 036314 239 SALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHN-----SWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPL----S 309 (347)
Q Consensus 239 ~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~-----~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~----~ 309 (347)
. .+++ ..|-.|.+|.+....+.-.+..+.++. .-|++..|+|..-.+++-.|.-|+|+|-|+|..... +
T Consensus 177 E-t~lS-ADdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsK 254 (433)
T KOG1354|consen 177 E-TFLS-ADDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSK 254 (433)
T ss_pred c-eEee-ccceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhh
Confidence 3 4444 468899999987654443444444443 347888999987778888899999999999953211 1
Q ss_pred e------------ecCCCCeEEEEeecC-CCEEEEccCCceEEEeecc
Q 036314 310 V------------IDSHKDKVLCADWWR-GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 310 ~------------~~~h~~~v~~~~~~~-~~~l~s~s~D~~v~vw~~~ 344 (347)
. |.+--..|..+.|++ |++|+|.+. -+|+||+.+
T Consensus 255 lfEepedp~~rsffseiIsSISDvKFs~sGryilsRDy-ltvk~wD~n 301 (433)
T KOG1354|consen 255 LFEEPEDPSSRSFFSEIISSISDVKFSHSGRYILSRDY-LTVKLWDLN 301 (433)
T ss_pred hhccccCCcchhhHHHHhhhhhceEEccCCcEEEEecc-ceeEEEecc
Confidence 1 111224567888974 788887553 689999975
No 281
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=98.48 E-value=5.1e-05 Score=63.40 Aligned_cols=191 Identities=10% Similarity=0.077 Sum_probs=103.2
Q ss_pred eEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeCC-----
Q 036314 122 VHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQ----- 196 (347)
Q Consensus 122 V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~----- 196 (347)
-+.++||||+.+||.+...|+|+++|+.....- ..... .... ..-..+|.++.|.+
T Consensus 46 WRkl~WSpD~tlLa~a~S~G~i~vfdl~g~~lf-----~I~p~-----------~~~~---~d~~~Aiagl~Fl~~~~s~ 106 (282)
T PF15492_consen 46 WRKLAWSPDCTLLAYAESTGTIRVFDLMGSELF-----VIPPA-----------MSFP---GDLSDAIAGLIFLEYKKSA 106 (282)
T ss_pred heEEEECCCCcEEEEEcCCCeEEEEecccceeE-----EcCcc-----------cccC---CccccceeeeEeecccccc
Confidence 467899999999999999999999998642110 00000 0000 01234566666621
Q ss_pred --CCeEEEEecCCcEEEEECCCC-----ceeeeeee----CeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCe
Q 036314 197 --QETIYSASWDHSVRTWDVEMG-----KDLSDIFC----GKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPV 265 (347)
Q Consensus 197 --~~~l~s~s~dg~v~vwd~~~~-----~~~~~~~~----~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~ 265 (347)
...|+...++|.++-|-+..+ +....+.. ...+.++.+++....+++.|.....-..+
T Consensus 107 ~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h~LLlVgG~~~~~~~~s----------- 175 (282)
T PF15492_consen 107 QWSYELLVINYRGQLRSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKHRLLLVGGCEQNQDGMS----------- 175 (282)
T ss_pred ccceeEEEEeccceeeeEEEEcccCCcceeeEEEEecccCCCceeEEEEcCCCCEEEEeccCCCCCccc-----------
Confidence 125777889988887765321 22223322 34677888876654444444333210000
Q ss_pred EEecCCCCCeeEEEeCCCCCe-EEEEEeCCCcE------EEEEcCCCccceee-cCCCCeEEEEeecC-CCEEEEccCCc
Q 036314 266 FQFSSHNSWISACKWHNKSWF-HLISASYDGKV------MLWDLRTAWPLSVI-DSHKDKVLCADWWR-GDSVISGGVDS 336 (347)
Q Consensus 266 ~~~~~h~~~v~~v~~s~~~~~-~l~s~s~D~~i------~lwd~~~~~~~~~~-~~h~~~v~~~~~~~-~~~l~s~s~D~ 336 (347)
.+-...+++-+.-.+.++ ..++...|+.. .+|.+-+.. .... ....+.|..|..|| |+.||+...+|
T Consensus 176 ---~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~~~~~~~-~fs~~~~~~d~i~kmSlSPdg~~La~ih~sG 251 (282)
T PF15492_consen 176 ---KASSCGLTAWRILSDSPYYKQVTSSEDDITASSKRRGLLRIPSFK-FFSRQGQEQDGIFKMSLSPDGSLLACIHFSG 251 (282)
T ss_pred ---cccccCceEEEEcCCCCcEEEccccCccccccccccceeecccee-eeeccccCCCceEEEEECCCCCEEEEEEcCC
Confidence 011112222222222222 23333333321 233322211 1111 22457889999986 77899999999
Q ss_pred eEEEeecccC
Q 036314 337 KLCVSSGVSI 346 (347)
Q Consensus 337 ~v~vw~~~~~ 346 (347)
.|.||+.||.
T Consensus 252 ~lsLW~iPsL 261 (282)
T PF15492_consen 252 SLSLWEIPSL 261 (282)
T ss_pred eEEEEecCcc
Confidence 9999999975
No 282
>KOG2314 consensus Translation initiation factor 3, subunit b (eIF-3b) [Translation, ribosomal structure and biogenesis]
Probab=98.47 E-value=0.00011 Score=66.57 Aligned_cols=285 Identities=13% Similarity=0.130 Sum_probs=148.3
Q ss_pred ccCCC-CCEEEEEecCCeEEEEcCCC--eEEEEeeccCCceEEEEEeecCCCceEEEEEccC-----------CCcEEEE
Q 036314 30 VDGSN-PGFILTGCYDNLGRVWKAGG--VCTHILEGHCGAVSSVNIIKSDGLKYVTVATASK-----------DQTLRLW 95 (347)
Q Consensus 30 ~~~~~-~~~l~sg~~d~~i~iw~~~~--~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~-----------Dg~v~~w 95 (347)
+.+|+ |.||+|==.-| |.+|--.. .+. .| .|.+ |.-+.|+|. ..+|+|-|. ...++||
T Consensus 216 v~wSP~GTYL~t~Hk~G-I~lWGG~~f~r~~-RF-~Hp~-Vq~idfSP~----EkYLVT~s~~p~~~~~~d~e~~~l~IW 287 (698)
T KOG2314|consen 216 VRWSPKGTYLVTFHKQG-IALWGGESFDRIQ-RF-YHPG-VQFIDFSPN----EKYLVTYSPEPIIVEEDDNEGQQLIIW 287 (698)
T ss_pred EEecCCceEEEEEeccc-eeeecCccHHHHH-hc-cCCC-ceeeecCCc----cceEEEecCCccccCcccCCCceEEEE
Confidence 45664 67888875555 67885321 121 12 3655 677888883 346776553 2579999
Q ss_pred eccccccccCccccceeeeeeccccceEE-EEEeCCCCEEEEeeCCCcEEEEecCCCCCCC-ccceeeec------cCCC
Q 036314 96 KFDAEELVNHPKKIRSFKILRGHKASVHS-IAAETSGNMVCSGSWDCTISLWRTNDSDAAG-NQVSIKKR------KGNN 167 (347)
Q Consensus 96 d~~~~~~~~~~~~~~~~~~~~~h~~~V~~-v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~-~~~~~~~~------~~~~ 167 (347)
|+.+|.+.+.+. .+++ ...+.. ..||.|++++|--.. .+|.||+..+..... +.+.+..- +...
T Consensus 288 DI~tG~lkrsF~------~~~~-~~~~WP~frWS~DdKy~Arm~~-~sisIyEtpsf~lld~Kslki~gIr~FswsP~~~ 359 (698)
T KOG2314|consen 288 DIATGLLKRSFP------VIKS-PYLKWPIFRWSHDDKYFARMTG-NSISIYETPSFMLLDKKSLKISGIRDFSWSPTSN 359 (698)
T ss_pred Eccccchhccee------ccCC-CccccceEEeccCCceeEEecc-ceEEEEecCceeeecccccCCccccCcccCCCcc
Confidence 999987543321 1211 222333 479999999986555 578899876532211 00100000 0000
Q ss_pred ccccc-----c----------ccccccccccCCccceEEEEeC-CCCeEEEE----------ecCCcEEEEECCCC-cee
Q 036314 168 QVEEP-----Q----------LEGEAISTLVGHTQCVSSVVWP-QQETIYSA----------SWDHSVRTWDVEMG-KDL 220 (347)
Q Consensus 168 ~~~~~-----~----------~~~~~~~~~~~h~~~v~~~~~~-~~~~l~s~----------s~dg~v~vwd~~~~-~~~ 220 (347)
.+... + ..+..+++..-|+-.-..+.|. +|++|+.- +.=..+.|+.++.. -++
T Consensus 360 llAYwtpe~~~~parvtL~evPs~~~iRt~nlfnVsDckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrireKdIpv 439 (698)
T KOG2314|consen 360 LLAYWTPETNNIPARVTLMEVPSKREIRTKNLFNVSDCKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREKDIPV 439 (698)
T ss_pred eEEEEcccccCCcceEEEEecCccceeeeccceeeeccEEEeccCCcEEEEEEEeeccccccceEeeEEEEEeeccCCCc
Confidence 00000 0 0111122222222222345563 45555421 11112444444332 122
Q ss_pred eeeeeCeeeEEEEeeCCCCcEEEEecC--CCcEEEEeCC-CCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEE---eCC
Q 036314 221 SDIFCGKALNCIDIGGEGSALIAAGGS--DPILRIWDPR-KPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA---SYD 294 (347)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~la~~~~--d~~i~iwd~~-~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~---s~D 294 (347)
..+.....+-..++.|.+..+.+..+. ..++.+|-+. ....+..+..+. ....+.+-|+|.|.. ++.+ |..
T Consensus 440 e~velke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk~~d--k~~~N~vfwsPkG~f-vvva~l~s~~ 516 (698)
T KOG2314|consen 440 EVVELKESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKKPSLVKELD--KKFANTVFWSPKGRF-VVVAALVSRR 516 (698)
T ss_pred eeeecchheeeeeeccCCCeEEEEEccccccceeEEEeecCCCchhhhhhhc--ccccceEEEcCCCcE-EEEEEecccc
Confidence 333334456667787776665444433 4688899876 333333344443 245677899999975 4444 357
Q ss_pred CcEEEEEcCCCcccee-ecCCCCeEEEEeecC-CCEEEEccC
Q 036314 295 GKVMLWDLRTAWPLSV-IDSHKDKVLCADWWR-GDSVISGGV 334 (347)
Q Consensus 295 ~~i~lwd~~~~~~~~~-~~~h~~~v~~~~~~~-~~~l~s~s~ 334 (347)
|.+..+|..-.....+ .-.|- .-..+.|-| |+++++++.
T Consensus 517 g~l~F~D~~~a~~k~~~~~eh~-~at~veWDPtGRYvvT~ss 557 (698)
T KOG2314|consen 517 GDLEFYDTDYADLKDTASPEHF-AATEVEWDPTGRYVVTSSS 557 (698)
T ss_pred cceEEEecchhhhhhccCcccc-ccccceECCCCCEEEEeee
Confidence 8999999974222211 12232 346678855 888888774
No 283
>KOG0882 consensus Cyclophilin-related peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=98.46 E-value=1e-06 Score=77.43 Aligned_cols=190 Identities=16% Similarity=0.258 Sum_probs=126.5
Q ss_pred CCCcCCceeeccCCCCCEEEEEecCCeEEEEcCC---C-eEEEEeeccCCceEEEEEeecCCCceEEEEEccC-CCcEEE
Q 036314 20 PSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAG---G-VCTHILEGHCGAVSSVNIIKSDGLKYVTVATASK-DQTLRL 94 (347)
Q Consensus 20 ~~~h~~~v~~~~~~~~~~l~sg~~d~~i~iw~~~---~-~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~-Dg~v~~ 94 (347)
.-.|.+-|+-+..+-..++.+++.||.++.|... | ..++.+..|.+.|.+++.+. ++....|.+. |..+|+
T Consensus 5 symhrd~i~hv~~tka~fiiqASlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~----dg~L~~Sv~d~Dhs~Kv 80 (558)
T KOG0882|consen 5 SYMHRDVITHVFPTKAKFIIQASLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSY----DGWLFRSVEDPDHSVKV 80 (558)
T ss_pred hhcccceeeeEeeehhheEEeeecchhhhhcCCCCccceeehhhhHHHHHHHHhhhccc----cceeEeeccCcccceeE
Confidence 4479999999988878899999999999999753 3 34567889999998888776 4456788777 999999
Q ss_pred Eecccccccc------Ccc--------------------------------c-cceeeeeeccccceEEEEEeCCCCEEE
Q 036314 95 WKFDAEELVN------HPK--------------------------------K-IRSFKILRGHKASVHSIAAETSGNMVC 135 (347)
Q Consensus 95 wd~~~~~~~~------~~~--------------------------------~-~~~~~~~~~h~~~V~~v~~s~~~~~l~ 135 (347)
+|+.+-.... .|+ . .+....-.-|..+|.++.+.+.++.++
T Consensus 81 fDvEn~DminmiKL~~lPg~a~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~v 160 (558)
T KOG0882|consen 81 FDVENFDMINMIKLVDLPGFAEWVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAV 160 (558)
T ss_pred EEeeccchhhhcccccCCCceEEecCCCCeeeeEEeecccCCCcEEECCcCCcCccceecccccCceEEEEeecccccee
Confidence 9976543221 000 0 011111134899999999999999999
Q ss_pred EeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEEC
Q 036314 136 SGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDV 214 (347)
Q Consensus 136 sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~ 214 (347)
|....|.|.-|..+..-...+. ..+..+.. .+.+..+.-......++.+ +++..+.+-+.|..|+++++
T Consensus 161 SiD~~gmVEyWs~e~~~qfPr~------~l~~~~K~----eTdLy~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~ 230 (558)
T KOG0882|consen 161 SIDISGMVEYWSAEGPFQFPRT------NLNFELKH----ETDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVF 230 (558)
T ss_pred eccccceeEeecCCCcccCccc------cccccccc----cchhhcccccccCccceEEccccCcccccCcccEEEEEEe
Confidence 9999999999987631000000 00000000 0011111111223345555 67888988899999999999
Q ss_pred CCCceeeee
Q 036314 215 EMGKDLSDI 223 (347)
Q Consensus 215 ~~~~~~~~~ 223 (347)
++++.+..+
T Consensus 231 KtGklvqei 239 (558)
T KOG0882|consen 231 KTGKLVQEI 239 (558)
T ss_pred ccchhhhhh
Confidence 999876554
No 284
>PRK04043 tolB translocation protein TolB; Provisional
Probab=98.45 E-value=0.00035 Score=64.28 Aligned_cols=230 Identities=8% Similarity=-0.007 Sum_probs=116.7
Q ss_pred eEEEE--cCCCeEEEEeeccCCceEEEEEeecCCCceEEEEEccC--CCcEEEEeccccccccCccccceeeeeeccccc
Q 036314 46 LGRVW--KAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASK--DQTLRLWKFDAEELVNHPKKIRSFKILRGHKAS 121 (347)
Q Consensus 46 ~i~iw--~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~--Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~ 121 (347)
.-+|| |..|...+.+.... ....-.|+|++.. ..+++... +..|.++|+.+++. ..+....+.
T Consensus 168 ~~~l~~~d~dg~~~~~~~~~~-~~~~p~wSpDG~~--~i~y~s~~~~~~~Iyv~dl~tg~~----------~~lt~~~g~ 234 (419)
T PRK04043 168 KSNIVLADYTLTYQKVIVKGG-LNIFPKWANKEQT--AFYYTSYGERKPTLYKYNLYTGKK----------EKIASSQGM 234 (419)
T ss_pred cceEEEECCCCCceeEEccCC-CeEeEEECCCCCc--EEEEEEccCCCCEEEEEECCCCcE----------EEEecCCCc
Confidence 34555 55565444444333 6678889996531 12222222 35688888766532 122223444
Q ss_pred eEEEEEeCCCCEEE-EeeCCC--cEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CCC
Q 036314 122 VHSIAAETSGNMVC-SGSWDC--TISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQ 197 (347)
Q Consensus 122 V~~v~~s~~~~~l~-sgs~Dg--~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~ 197 (347)
....+|+|||+.++ +.+.++ .|.++++..+.. +.+..+........| |++
T Consensus 235 ~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~~--------------------------~~LT~~~~~d~~p~~SPDG 288 (419)
T PRK04043 235 LVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKTL--------------------------TQITNYPGIDVNGNFVEDD 288 (419)
T ss_pred EEeeEECCCCCEEEEEEccCCCcEEEEEECCCCcE--------------------------EEcccCCCccCccEECCCC
Confidence 56678999997554 555454 455556543211 111111111112245 677
Q ss_pred CeEEEEec-CC--cEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCC--------CcEEEEeCCCCCCCCCeE
Q 036314 198 ETIYSASW-DH--SVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSD--------PILRIWDPRKPGTSAPVF 266 (347)
Q Consensus 198 ~~l~s~s~-dg--~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d--------~~i~iwd~~~~~~~~~~~ 266 (347)
+.|+..+. .+ .|.+.|+.+++.......+.. ...++|++..++.+.... ..|.+.|+.... ..
T Consensus 289 ~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt~~g~~--~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~----~~ 362 (419)
T PRK04043 289 KRIVFVSDRLGYPNIFMKKLNSGSVEQVVFHGKN--NSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDY----IR 362 (419)
T ss_pred CEEEEEECCCCCceEEEEECCCCCeEeCccCCCc--CceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCC----eE
Confidence 77765553 33 466678877654322222221 236777766555554433 367777876432 23
Q ss_pred EecCCCCCeeEEEeCCCCCeEEEEEeCCCc--EEEEEcCCCccceeecCCCCeEEEEe
Q 036314 267 QFSSHNSWISACKWHNKSWFHLISASYDGK--VMLWDLRTAWPLSVIDSHKDKVLCAD 322 (347)
Q Consensus 267 ~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~--i~lwd~~~~~~~~~~~~h~~~v~~~~ 322 (347)
.+.... ......|+|||...+.+....+. +.+.+++.. ....+....+.+..-+
T Consensus 363 ~LT~~~-~~~~p~~SPDG~~I~f~~~~~~~~~L~~~~l~g~-~~~~l~~~~g~~~~p~ 418 (419)
T PRK04043 363 RLTANG-VNQFPRFSSDGGSIMFIKYLGNQSALGIIRLNYN-KSFLFPLKVGKIQSID 418 (419)
T ss_pred ECCCCC-CcCCeEECCCCCEEEEEEccCCcEEEEEEecCCC-eeEEeecCCCccCCCC
Confidence 333322 23357899999765454443333 555666543 3333433334444433
No 285
>KOG2315 consensus Predicted translation initiation factor related to eIF-3a [Translation, ribosomal structure and biogenesis]
Probab=98.44 E-value=8.5e-05 Score=67.31 Aligned_cols=252 Identities=18% Similarity=0.243 Sum_probs=132.8
Q ss_pred eccCCCCCEEEEEecCCeEEEEcCCCeEEEEeeccCCceEEEEEeecCCCceEEEE-----EccCCCcEEEEeccccccc
Q 036314 29 AVDGSNPGFILTGCYDNLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVA-----TASKDQTLRLWKFDAEELV 103 (347)
Q Consensus 29 ~~~~~~~~~l~sg~~d~~i~iw~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~-----s~s~Dg~v~~wd~~~~~~~ 103 (347)
...|+.+..|+.==..+.+.+|+..+...-.-.-|...|+...++|.... ..|| ..+.=..||+|.+.....
T Consensus 130 ~~qfs~dEsl~arlv~nev~f~~~~~f~~~~~kl~~~~i~~f~lSpgp~~--~~vAvyvPe~kGaPa~vri~~~~~~~~- 206 (566)
T KOG2315|consen 130 VPQFSIDESLAARLVSNEVQFYDLGSFKTIQHKLSVSGITMLSLSPGPEP--PFVAVYVPEKKGAPASVRIYKYPEEGQ- 206 (566)
T ss_pred ccccccchhhhhhhhcceEEEEecCCccceeeeeeccceeeEEecCCCCC--ceEEEEccCCCCCCcEEEEeccccccc-
Confidence 56677554444333345789998754222222224556777777774322 2233 345556799998763211
Q ss_pred cCccccceeeeeeccccceEEEEEeCCCC-EEE--EeeCCC---------cEEEEecCCCCCCCccceeeeccCCCcccc
Q 036314 104 NHPKKIRSFKILRGHKASVHSIAAETSGN-MVC--SGSWDC---------TISLWRTNDSDAAGNQVSIKKRKGNNQVEE 171 (347)
Q Consensus 104 ~~~~~~~~~~~~~~h~~~V~~v~~s~~~~-~l~--sgs~Dg---------~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 171 (347)
..+ ...++|- ...=-.+.|++-|. +|+ +.--|. ++.+.++.
T Consensus 207 ~~~---~a~ksFF--kadkvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~---------------------- 259 (566)
T KOG2315|consen 207 HQP---VANKSFF--KADKVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQ---------------------- 259 (566)
T ss_pred cch---hhhcccc--ccceeEEEeccCCceEEEEEEEeecCCCccccccceEEEEEec----------------------
Confidence 111 1111221 11112345665553 222 222232 23333322
Q ss_pred ccccccccccccCCccceEEEEeC-CCCeE--EEEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEec--
Q 036314 172 PQLEGEAISTLVGHTQCVSSVVWP-QQETI--YSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGG-- 246 (347)
Q Consensus 172 ~~~~~~~~~~~~~h~~~v~~~~~~-~~~~l--~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~-- 246 (347)
+.....--.-.++|.++.|+ .+..+ +-|-+--.+.++|++ +..+..+.. .+-+++-|+|.+..++++|.
T Consensus 260 ----g~s~~V~L~k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr-~~~v~df~e-gpRN~~~fnp~g~ii~lAGFGN 333 (566)
T KOG2315|consen 260 ----GESVSVPLLKEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLR-GKPVFDFPE-GPRNTAFFNPHGNIILLAGFGN 333 (566)
T ss_pred ----CceEEEecCCCCCceEEEECCCCCEEEEEEecccceEEEEcCC-CCEeEeCCC-CCccceEECCCCCEEEEeecCC
Confidence 01111111235789999995 55544 445556789999986 455555532 34456667665544444443
Q ss_pred CCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEe-C-----CCcEEEEEcCCCccceeecCCCCeEEE
Q 036314 247 SDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISAS-Y-----DGKVMLWDLRTAWPLSVIDSHKDKVLC 320 (347)
Q Consensus 247 ~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s-~-----D~~i~lwd~~~~~~~~~~~~h~~~v~~ 320 (347)
..|.+.+||.... +.+..+..-. -+-+.|+|||.+ ++|+. . |..++||+.. |..+..-+ .....+.
T Consensus 334 L~G~mEvwDv~n~---K~i~~~~a~~--tt~~eW~PdGe~-flTATTaPRlrvdNg~Kiwhyt-G~~l~~~~-f~sEL~q 405 (566)
T KOG2315|consen 334 LPGDMEVWDVPNR---KLIAKFKAAN--TTVFEWSPDGEY-FLTATTAPRLRVDNGIKIWHYT-GSLLHEKM-FKSELLQ 405 (566)
T ss_pred CCCceEEEeccch---hhccccccCC--ceEEEEcCCCcE-EEEEeccccEEecCCeEEEEec-Cceeehhh-hhHhHhh
Confidence 2489999998752 2234443332 345899999976 55554 3 7889999996 44444311 1225777
Q ss_pred Eeec
Q 036314 321 ADWW 324 (347)
Q Consensus 321 ~~~~ 324 (347)
+.|-
T Consensus 406 v~W~ 409 (566)
T KOG2315|consen 406 VEWR 409 (566)
T ss_pred eeee
Confidence 8885
No 286
>KOG2066 consensus Vacuolar assembly/sorting protein VPS41 [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.42 E-value=1.7e-05 Score=74.73 Aligned_cols=184 Identities=18% Similarity=0.158 Sum_probs=120.0
Q ss_pred cCCceeeccCCCCCEEEEEecCCeEEEEcCCCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEecccccc
Q 036314 23 HDDWVSAVDGSNPGFILTGCYDNLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEEL 102 (347)
Q Consensus 23 h~~~v~~~~~~~~~~l~sg~~d~~i~iw~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~ 102 (347)
..+.+++.+++ +.+|+-|..+|.+++.+..+.. .+...|... +..+.+++|||+||+|.+-.+.+.+.
T Consensus 38 ~~D~is~~av~-~~~~~~GtH~g~v~~~~~~~~~-~~~~~~s~~----------~~~Gey~asCS~DGkv~I~sl~~~~~ 105 (846)
T KOG2066|consen 38 QNDAISCCAVH-DKFFALGTHRGAVYLTTCQGNP-KTNFDHSSS----------ILEGEYVASCSDDGKVVIGSLFTDDE 105 (846)
T ss_pred hhhHHHHHHhh-cceeeeccccceEEEEecCCcc-ccccccccc----------ccCCceEEEecCCCcEEEeeccCCcc
Confidence 56777777764 5789999999999999876654 333334332 22456899999999999998866532
Q ss_pred ccCccccceeeeeeccccceEEEEEeCC-----CCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccccc
Q 036314 103 VNHPKKIRSFKILRGHKASVHSIAAETS-----GNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGE 177 (347)
Q Consensus 103 ~~~~~~~~~~~~~~~h~~~V~~v~~s~~-----~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (347)
..+ .....++.+++++|+ .+++++|+.-| +.++.-. ..+..
T Consensus 106 ---------~~~-~df~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~---wlgnk-------------------- 151 (846)
T KOG2066|consen 106 ---------ITQ-YDFKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERN---WLGNK-------------------- 151 (846)
T ss_pred ---------cee-EecCCcceeEEeccchhhhhhhheeecCcce-EEEehhh---hhcCc--------------------
Confidence 111 234778999999998 57899999998 7666321 00000
Q ss_pred ccccccCCccceEEEEeCCCCeEEEEecCCcEEEEECCCCceeeeeeeCee-------eEEEEeeCCCCcEEEEecCCCc
Q 036314 178 AISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKA-------LNCIDIGGEGSALIAAGGSDPI 250 (347)
Q Consensus 178 ~~~~~~~h~~~v~~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~la~~~~d~~ 250 (347)
..-.+..-.++|.++.| .+..+|=++.+| +++||+...+.+..++.... ...+.|.+. ..++.| ...+
T Consensus 152 ~~v~l~~~eG~I~~i~W-~g~lIAWand~G-v~vyd~~~~~~l~~i~~p~~~~R~e~fpphl~W~~~--~~LVIG-W~d~ 226 (846)
T KOG2066|consen 152 DSVVLSEGEGPIHSIKW-RGNLIAWANDDG-VKVYDTPTRQRLTNIPPPSQSVRPELFPPHLHWQDE--DRLVIG-WGDS 226 (846)
T ss_pred cceeeecCccceEEEEe-cCcEEEEecCCC-cEEEeccccceeeccCCCCCCCCcccCCCceEecCC--CeEEEe-cCCe
Confidence 00012234568899998 456777776665 99999998877766653321 123444332 344444 5677
Q ss_pred EEEEeCC
Q 036314 251 LRIWDPR 257 (347)
Q Consensus 251 i~iwd~~ 257 (347)
|+|..++
T Consensus 227 v~i~~I~ 233 (846)
T KOG2066|consen 227 VKICSIK 233 (846)
T ss_pred EEEEEEe
Confidence 8898887
No 287
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=98.37 E-value=1.1e-05 Score=67.91 Aligned_cols=214 Identities=13% Similarity=0.220 Sum_probs=124.1
Q ss_pred ccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCC-CCCccceeeeccCCCccccccccccccccccCCccceEEEEeC-C
Q 036314 119 KASVHSIAAETSGNMVCSGSWDCTISLWRTNDSD-AAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP-Q 196 (347)
Q Consensus 119 ~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~ 196 (347)
...|++|.|...|.++++|...|.|-+|.-+... +..+.....+ .. ..+...+..+. -...|..+.|- +
T Consensus 26 ad~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQ------sh--e~EFDYLkSle-ieEKin~I~w~~~ 96 (460)
T COG5170 26 ADKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQ------SH--ELEFDYLKSLE-IEEKINAIEWFDD 96 (460)
T ss_pred cceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhc------cc--ccchhhhhhcc-HHHHhhheeeecC
Confidence 4568899999999999999999999999654321 0000000000 00 00000111111 11346667762 2
Q ss_pred C--CeEEEEecCCcEEEEECCCCc-------------------ee---ee-----eee-----------------CeeeE
Q 036314 197 Q--ETIYSASWDHSVRTWDVEMGK-------------------DL---SD-----IFC-----------------GKALN 230 (347)
Q Consensus 197 ~--~~l~s~s~dg~v~vwd~~~~~-------------------~~---~~-----~~~-----------------~~~~~ 230 (347)
. ..++..+.|++|++|-+.... ++ .. +.. ..-++
T Consensus 97 t~r~hFLlstNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiN 176 (460)
T COG5170 97 TGRNHFLLSTNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHIN 176 (460)
T ss_pred CCcceEEEecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEee
Confidence 2 235556789999999875321 00 00 000 01234
Q ss_pred EEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCC-----CCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCC
Q 036314 231 CIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHN-----SWISACKWHNKSWFHLISASYDGKVMLWDLRTA 305 (347)
Q Consensus 231 ~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~-----~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~ 305 (347)
.+.+.++.. .+++ ..|-.|.+|.+......-.+..+.+|. .-|++..|+|.....+.-.+.-|.|++-|+|..
T Consensus 177 SiS~NsD~e-t~lS-aDdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~ 254 (460)
T COG5170 177 SISFNSDKE-TLLS-ADDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQS 254 (460)
T ss_pred eeeecCchh-eeee-ccceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhhh
Confidence 455544433 4443 468899999987655444455555554 247888999987667777788899999999943
Q ss_pred cc----cee------------ecCCCCeEEEEeecC-CCEEEEccCCceEEEeecc
Q 036314 306 WP----LSV------------IDSHKDKVLCADWWR-GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 306 ~~----~~~------------~~~h~~~v~~~~~~~-~~~l~s~s~D~~v~vw~~~ 344 (347)
.. .+. +++-...|..+.|++ |+++++.+ =-+|+||+.+
T Consensus 255 alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRd-yltvkiwDvn 309 (460)
T COG5170 255 ALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRD-YLTVKIWDVN 309 (460)
T ss_pred hhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEec-cceEEEEecc
Confidence 21 111 122234566788986 55666655 4689999865
No 288
>KOG4532 consensus WD40-like repeat containing protein [General function prediction only]
Probab=98.37 E-value=4.2e-05 Score=63.22 Aligned_cols=170 Identities=11% Similarity=0.064 Sum_probs=105.3
Q ss_pred CCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEE-e-CCCCeEEEEecCCc
Q 036314 131 GNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVV-W-PQQETIYSASWDHS 208 (347)
Q Consensus 131 ~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~-~-~~~~~l~s~s~dg~ 208 (347)
...|+.|+.-|...+|...+.+.. .+....|...|.-+. + ...-.+.-++.|.+
T Consensus 84 c~~la~gG~~g~fd~~~~~tn~~h------------------------~~~cd~snn~v~~~~r~cd~~~~~~i~sndht 139 (344)
T KOG4532|consen 84 CVTLADGGASGQFDLFACNTNDGH------------------------LYQCDVSNNDVTLVKRYCDLKFPLNIASNDHT 139 (344)
T ss_pred ccEEEeccccceeeeecccCcccc------------------------eeeecccccchhhhhhhcccccceeeccCCcc
Confidence 357888999999999987653211 011111111111000 0 11123556788999
Q ss_pred EEEEECCCCceeeeeeeC-eeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeE
Q 036314 209 VRTWDVEMGKDLSDIFCG-KALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFH 287 (347)
Q Consensus 209 v~vwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~ 287 (347)
+++.++..+..-..+... -....++++ +++.+.++.+....|-+|.+................+.--+..|+..+ .+
T Consensus 140 ~k~~~~~~~s~~~~~h~~~~~~ns~~~s-nd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~-~~ 217 (344)
T KOG4532|consen 140 GKTMVVSGDSNKFAVHNQNLTQNSLHYS-NDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSEND-LQ 217 (344)
T ss_pred eeEEEEecCcccceeeccccceeeeEEc-CCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCc-ce
Confidence 999988654322222111 124566664 456678888888999999887543322223445555666778888776 46
Q ss_pred EEEEeCCCcEEEEEcCCCcc-ce----eecCCCCeEEEEeecCC
Q 036314 288 LISASYDGKVMLWDLRTAWP-LS----VIDSHKDKVLCADWWRG 326 (347)
Q Consensus 288 l~s~s~D~~i~lwd~~~~~~-~~----~~~~h~~~v~~~~~~~~ 326 (347)
+|++..||++-|||+|.... .. +-..|.++++.+.|+++
T Consensus 218 FAv~~Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~ 261 (344)
T KOG4532|consen 218 FAVVFQDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLY 261 (344)
T ss_pred EEEEecCCcEEEEEecccccchhhhcccCCCCCCceEEEEecCC
Confidence 99999999999999986422 21 22358899999999863
No 289
>KOG2066 consensus Vacuolar assembly/sorting protein VPS41 [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.35 E-value=1.7e-05 Score=74.71 Aligned_cols=183 Identities=18% Similarity=0.218 Sum_probs=121.0
Q ss_pred ccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeCCCC
Q 036314 119 KASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQE 198 (347)
Q Consensus 119 ~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 198 (347)
.+.+.|++++ +++++-|..+|.|++.+.... . ++...|... -..|+
T Consensus 39 ~D~is~~av~--~~~~~~GtH~g~v~~~~~~~~--------------------------~-~~~~~~s~~-----~~~Ge 84 (846)
T KOG2066|consen 39 NDAISCCAVH--DKFFALGTHRGAVYLTTCQGN--------------------------P-KTNFDHSSS-----ILEGE 84 (846)
T ss_pred hhHHHHHHhh--cceeeeccccceEEEEecCCc--------------------------c-ccccccccc-----ccCCc
Confidence 4456666665 578888999999999976421 0 111122211 13688
Q ss_pred eEEEEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCC----CCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCC
Q 036314 199 TIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGE----GSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSW 274 (347)
Q Consensus 199 ~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~----~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~ 274 (347)
+++|+|.||++.|--+-+++...+...+.++..++++|+ ....+++||.-| +.++.-+--+.... ..+....+.
T Consensus 85 y~asCS~DGkv~I~sl~~~~~~~~~df~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~-v~l~~~eG~ 162 (846)
T KOG2066|consen 85 YVASCSDDGKVVIGSLFTDDEITQYDFKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDS-VVLSEGEGP 162 (846)
T ss_pred eEEEecCCCcEEEeeccCCccceeEecCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccc-eeeecCccc
Confidence 999999999999998888887777777888999999876 345678888888 88886432222222 245566678
Q ss_pred eeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEE------EEeecCCCEEEEccCCceEEEee
Q 036314 275 ISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVL------CADWWRGDSVISGGVDSKLCVSS 342 (347)
Q Consensus 275 v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~------~~~~~~~~~l~s~s~D~~v~vw~ 342 (347)
|.+|.|.. .++|=++.+| |+++|...++.+..+.--...++ -+.|.+..+|+- |+..+|+|.+
T Consensus 163 I~~i~W~g---~lIAWand~G-v~vyd~~~~~~l~~i~~p~~~~R~e~fpphl~W~~~~~LVI-GW~d~v~i~~ 231 (846)
T KOG2066|consen 163 IHSIKWRG---NLIAWANDDG-VKVYDTPTRQRLTNIPPPSQSVRPELFPPHLHWQDEDRLVI-GWGDSVKICS 231 (846)
T ss_pred eEEEEecC---cEEEEecCCC-cEEEeccccceeeccCCCCCCCCcccCCCceEecCCCeEEE-ecCCeEEEEE
Confidence 99999964 3566666555 89999988766655432222332 345656666665 4444555543
No 290
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=98.35 E-value=0.00074 Score=58.14 Aligned_cols=67 Identities=15% Similarity=0.209 Sum_probs=46.7
Q ss_pred CCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeecCCCEEEEccCCceE
Q 036314 270 SHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGGVDSKL 338 (347)
Q Consensus 270 ~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~D~~v 338 (347)
.-..|+-+|++++++....+|+=..+.+.+||..+++.+....- ..+-+++-.++..++|.+....+
T Consensus 214 ~l~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d~~tg~~~~~~~l--~D~cGva~~~~~f~~ssG~G~~~ 280 (305)
T PF07433_consen 214 RLNGYIGSIAADRDGRLIAVTSPRGGRVAVWDAATGRLLGSVPL--PDACGVAPTDDGFLVSSGQGQLI 280 (305)
T ss_pred hhCCceEEEEEeCCCCEEEEECCCCCEEEEEECCCCCEeecccc--CceeeeeecCCceEEeCCCccEE
Confidence 34578999999999876556666889999999999886665432 24455555555567776655433
No 291
>KOG1912 consensus WD40 repeat protein [General function prediction only]
Probab=98.34 E-value=2.2e-05 Score=73.74 Aligned_cols=83 Identities=17% Similarity=0.101 Sum_probs=57.1
Q ss_pred CCCcCCceeeccC----------CCC--C-EEEEEecCCeEEEEcCC-CeEEEEeeccCCceEEEEEeecCCCceEEEEE
Q 036314 20 PSLHDDWVSAVDG----------SNP--G-FILTGCYDNLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKYVTVAT 85 (347)
Q Consensus 20 ~~~h~~~v~~~~~----------~~~--~-~l~sg~~d~~i~iw~~~-~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s 85 (347)
.--|...|+.++. ++. + +||++...|.|.+||.. +...--+..|.++|..+.|.+........|+.
T Consensus 51 ie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~~~s~~~~l~~~~~~~qdl~W~~~rd~Srd~Lla 130 (1062)
T KOG1912|consen 51 IELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFVLASVINWLSHSNDSVQDLCWVPARDDSRDVLLA 130 (1062)
T ss_pred cccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEehhhhhhhhhcCCCcchhheeeeeccCcchheeEE
Confidence 3356677776663 211 2 57788888999999964 44444578899999999998744322245666
Q ss_pred ccCCCcEEEEecccccc
Q 036314 86 ASKDQTLRLWKFDAEEL 102 (347)
Q Consensus 86 ~s~Dg~v~~wd~~~~~~ 102 (347)
-..-.++-+|+..+|+.
T Consensus 131 Ih~ss~lvLwntdtG~k 147 (1062)
T KOG1912|consen 131 IHGSSTLVLWNTDTGEK 147 (1062)
T ss_pred ecCCcEEEEEEccCCce
Confidence 66667999999887753
No 292
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=98.33 E-value=0.00084 Score=61.59 Aligned_cols=268 Identities=14% Similarity=0.083 Sum_probs=137.1
Q ss_pred CCEEEEEecCCeEEEEcC-CCeEEEEeeccCCceEE-EEEeecCCCceEEEEEccCCCcEEEEeccccccccCcccccee
Q 036314 35 PGFILTGCYDNLGRVWKA-GGVCTHILEGHCGAVSS-VNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSF 112 (347)
Q Consensus 35 ~~~l~sg~~d~~i~iw~~-~~~~~~~l~~h~~~V~~-v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~ 112 (347)
++.+..++.++.+..+|. +|+.+....-.. .+.+ ..+. ++ .++.++.++.|..+|.++++.+=......+.
T Consensus 120 ~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~-~~~ssP~v~--~~----~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~ 192 (394)
T PRK11138 120 GGKVYIGSEKGQVYALNAEDGEVAWQTKVAG-EALSRPVVS--DG----LVLVHTSNGMLQALNESDGAVKWTVNLDVPS 192 (394)
T ss_pred CCEEEEEcCCCEEEEEECCCCCCcccccCCC-ceecCCEEE--CC----EEEEECCCCEEEEEEccCCCEeeeecCCCCc
Confidence 455666778899999986 466554433222 2221 1111 11 3566778899999999887643110000000
Q ss_pred eeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccC-CccceEE
Q 036314 113 KILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVG-HTQCVSS 191 (347)
Q Consensus 113 ~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~ 191 (347)
..+.+...++. . +..++.++.++.+...|..++........ ..... ......+.. ...++
T Consensus 193 ~~~~~~~sP~v----~--~~~v~~~~~~g~v~a~d~~~G~~~W~~~~------~~~~~-----~~~~~~~~~~~~sP~-- 253 (394)
T PRK11138 193 LTLRGESAPAT----A--FGGAIVGGDNGRVSAVLMEQGQLIWQQRI------SQPTG-----ATEIDRLVDVDTTPV-- 253 (394)
T ss_pred ccccCCCCCEE----E--CCEEEEEcCCCEEEEEEccCChhhheecc------ccCCC-----ccchhcccccCCCcE--
Confidence 00111122221 1 23455677788888888776543211000 00000 000000000 00111
Q ss_pred EEeCCCCeEEEEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCC
Q 036314 192 VVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSH 271 (347)
Q Consensus 192 ~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h 271 (347)
. .++.++.++.++.+..+|.++++.+=+...... ..+.. .++ .+..++.++.+..+|..... .+-....-
T Consensus 254 -v--~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~-~~~~~--~~~-~vy~~~~~g~l~ald~~tG~---~~W~~~~~ 323 (394)
T PRK11138 254 -V--VGGVVYALAYNGNLVALDLRSGQIVWKREYGSV-NDFAV--DGG-RIYLVDQNDRVYALDTRGGV---ELWSQSDL 323 (394)
T ss_pred -E--ECCEEEEEEcCCeEEEEECCCCCEEEeecCCCc-cCcEE--ECC-EEEEEcCCCeEEEEECCCCc---EEEccccc
Confidence 1 246777788899999999999875432221111 11122 222 44556778999999986432 11111100
Q ss_pred CC-CeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEE-EeecCCCEEEEccCCceEEEee
Q 036314 272 NS-WISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLC-ADWWRGDSVISGGVDSKLCVSS 342 (347)
Q Consensus 272 ~~-~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~-~~~~~~~~l~s~s~D~~v~vw~ 342 (347)
.. ...+.... ++ .|..++.||.+...|.++|+.+....-....+.+ ..+ .+++|..++.||.|...+
T Consensus 324 ~~~~~~sp~v~-~g--~l~v~~~~G~l~~ld~~tG~~~~~~~~~~~~~~s~P~~-~~~~l~v~t~~G~l~~~~ 392 (394)
T PRK11138 324 LHRLLTAPVLY-NG--YLVVGDSEGYLHWINREDGRFVAQQKVDSSGFLSEPVV-ADDKLLIQARDGTVYAIT 392 (394)
T ss_pred CCCcccCCEEE-CC--EEEEEeCCCEEEEEECCCCCEEEEEEcCCCcceeCCEE-ECCEEEEEeCCceEEEEe
Confidence 01 11111121 22 4788899999999999999877665433233332 222 255777789999988765
No 293
>KOG2114 consensus Vacuolar assembly/sorting protein PEP5/VPS11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.33 E-value=0.00041 Score=66.18 Aligned_cols=219 Identities=12% Similarity=0.173 Sum_probs=133.0
Q ss_pred ceeeccCCCCCEEEEEecCCeEEEEcCCCeEEEEeeccCCc-eEEEEEeecCCCceEEEEEccCCCc-----EEEEeccc
Q 036314 26 WVSAVDGSNPGFILTGCYDNLGRVWKAGGVCTHILEGHCGA-VSSVNIIKSDGLKYVTVATASKDQT-----LRLWKFDA 99 (347)
Q Consensus 26 ~v~~~~~~~~~~l~sg~~d~~i~iw~~~~~~~~~l~~h~~~-V~~v~~~~~~~~~~~~l~s~s~Dg~-----v~~wd~~~ 99 (347)
.|++++ +.++.+|-|+.||.|-+.+..-+..+.+..+... |..+....+ ...|++-++|++ |++|+++.
T Consensus 27 ~isc~~-s~~~~vvigt~~G~V~~Ln~s~~~~~~fqa~~~siv~~L~~~~~----~~~L~sv~Ed~~~np~llkiw~lek 101 (933)
T KOG2114|consen 27 AISCCS-SSTGSVVIGTADGRVVILNSSFQLIRGFQAYEQSIVQFLYILNK----QNFLFSVGEDEQGNPVLLKIWDLEK 101 (933)
T ss_pred ceeEEc-CCCceEEEeeccccEEEecccceeeehheecchhhhhHhhcccC----ceEEEEEeecCCCCceEEEEecccc
Confidence 667665 3567899999999887777654455667777666 444443321 135777777764 99999875
Q ss_pred cccccCccccceee--eeec-----cccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccc
Q 036314 100 EELVNHPKKIRSFK--ILRG-----HKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEP 172 (347)
Q Consensus 100 ~~~~~~~~~~~~~~--~~~~-----h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (347)
-+.- .+++++. .+.+ ...++.+++.+.+-+.+|.|=.+|.|..+.-+-...
T Consensus 102 ~~~n---~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RD------------------- 159 (933)
T KOG2114|consen 102 VDKN---NSPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRD------------------- 159 (933)
T ss_pred cCCC---CCcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhc-------------------
Confidence 4311 1133441 1122 355678899999989999999999998884211000
Q ss_pred cccccccccccCCccceEEEEeC-CCCeEEEEecCCcEEEEECCCCceeee-ee-eCeeeEEEEeeCCCCcEEEEecCCC
Q 036314 173 QLEGEAISTLVGHTQCVSSVVWP-QQETIYSASWDHSVRTWDVEMGKDLSD-IF-CGKALNCIDIGGEGSALIAAGGSDP 249 (347)
Q Consensus 173 ~~~~~~~~~~~~h~~~v~~~~~~-~~~~l~s~s~dg~v~vwd~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~la~~~~d~ 249 (347)
.+........-..+|+++++. ++..++.+..-..|.+|.+....+... +. .+-..+|..+++....+++++ +.
T Consensus 160 --rgsr~~~~~~~~~pITgL~~~~d~~s~lFv~Tt~~V~~y~l~gr~p~~~~ld~~G~~lnCss~~~~t~qfIca~--~e 235 (933)
T KOG2114|consen 160 --RGSRQDYSHRGKEPITGLALRSDGKSVLFVATTEQVMLYSLSGRTPSLKVLDNNGISLNCSSFSDGTYQFICAG--SE 235 (933)
T ss_pred --cccceeeeccCCCCceeeEEecCCceeEEEEecceeEEEEecCCCcceeeeccCCccceeeecCCCCccEEEec--Cc
Confidence 001011111234678999884 555534444556799999873321222 22 234678888876655455544 57
Q ss_pred cEEEEeCCCCCCCCCeEEec-CCCCCeeEE
Q 036314 250 ILRIWDPRKPGTSAPVFQFS-SHNSWISAC 278 (347)
Q Consensus 250 ~i~iwd~~~~~~~~~~~~~~-~h~~~v~~v 278 (347)
.+.+||.... .+-+++. ||...+..+
T Consensus 236 ~l~fY~sd~~---~~cfaf~~g~kk~~~~~ 262 (933)
T KOG2114|consen 236 FLYFYDSDGR---GPCFAFEVGEKKEMLVF 262 (933)
T ss_pred eEEEEcCCCc---ceeeeecCCCeEEEEEE
Confidence 8999997632 3456777 777655433
No 294
>KOG4714 consensus Nucleoporin [Nuclear structure]
Probab=98.33 E-value=1.2e-06 Score=71.74 Aligned_cols=143 Identities=19% Similarity=0.196 Sum_probs=91.1
Q ss_pred CCCeEEEEecCCcEEEEECCCCceee-eeee---CeeeEEEEeeCCCCcEEEEec-----CCCcEEEEeCCCCCCCCCeE
Q 036314 196 QQETIYSASWDHSVRTWDVEMGKDLS-DIFC---GKALNCIDIGGEGSALIAAGG-----SDPILRIWDPRKPGTSAPVF 266 (347)
Q Consensus 196 ~~~~l~s~s~dg~v~vwd~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~la~~~-----~d~~i~iwd~~~~~~~~~~~ 266 (347)
.+..++++..||.+.+.+.+.-..+. .+.. ...-.++. . ..+++.++. .-+..+.|+++..+...+ .
T Consensus 100 ~~t~V~~~~~dg~~~v~s~~~~~~~~~~i~~~~~~~as~~~~--~-~~~~i~s~~~g~~n~~d~~~a~~~~p~~t~~~-~ 175 (319)
T KOG4714|consen 100 TDNRVCIGYADGSLAVFSTDKDLALMSRIPSIHSGSASRKIC--R-HGNSILSGGCGNWNAQDNFYANTLDPIKTLIP-S 175 (319)
T ss_pred cCCceEecCCCceEEEEechHHHhhhhhccccccccccccee--e-cccEEecCCcceEeeccceeeecccccccccc-c
Confidence 35678899999999999876422111 1110 00001111 1 112332221 123455666654322111 1
Q ss_pred EecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCC-ccceeecCCCCeEEEEeecC--CCEEEEccCCceEEEeec
Q 036314 267 QFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTA-WPLSVIDSHKDKVLCADWWR--GDSVISGGVDSKLCVSSG 343 (347)
Q Consensus 267 ~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~-~~~~~~~~h~~~v~~~~~~~--~~~l~s~s~D~~v~vw~~ 343 (347)
. ...+.|.+++-+|.-..++++|+.||.+-|||+|.. .+...+..|+.+++.+-|+| +..|.+++.||.+.-|+-
T Consensus 176 ~--~~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wda 253 (319)
T KOG4714|consen 176 K--KALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDA 253 (319)
T ss_pred c--cccccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcC
Confidence 1 122348888888887778899999999999999986 34456789999999999985 567999999999999985
Q ss_pred c
Q 036314 344 V 344 (347)
Q Consensus 344 ~ 344 (347)
.
T Consensus 254 s 254 (319)
T KOG4714|consen 254 S 254 (319)
T ss_pred C
Confidence 4
No 295
>KOG1645 consensus RING-finger-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=98.31 E-value=4.9e-05 Score=66.22 Aligned_cols=82 Identities=18% Similarity=0.276 Sum_probs=64.9
Q ss_pred eeeeeeccccceEEEEEeCCCC-EEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccce
Q 036314 111 SFKILRGHKASVHSIAAETSGN-MVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCV 189 (347)
Q Consensus 111 ~~~~~~~h~~~V~~v~~s~~~~-~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 189 (347)
..+.+.+|...|++++|+|..+ ++..++.+.+|+|.|+++.. ....+..| .++
T Consensus 185 ssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~-------------------------~vssy~a~-~~~ 238 (463)
T KOG1645|consen 185 SSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSC-------------------------VVSSYIAY-NQI 238 (463)
T ss_pred hhhcccccchhhhhhccCccccceeeeeccCceEEEEecccce-------------------------eeeheecc-CCc
Confidence 3446778999999999999987 78889999999999998642 22334445 678
Q ss_pred EEEEeC--CCCeEEEEecCCcEEEEECCCCc
Q 036314 190 SSVVWP--QQETIYSASWDHSVRTWDVEMGK 218 (347)
Q Consensus 190 ~~~~~~--~~~~l~s~s~dg~v~vwd~~~~~ 218 (347)
++.+|. +...|+.|-.+|.|.+||++..+
T Consensus 239 wSC~wDlde~h~IYaGl~nG~VlvyD~R~~~ 269 (463)
T KOG1645|consen 239 WSCCWDLDERHVIYAGLQNGMVLVYDMRQPE 269 (463)
T ss_pred eeeeeccCCcceeEEeccCceEEEEEccCCC
Confidence 888884 45679999999999999998654
No 296
>KOG4497 consensus Uncharacterized conserved protein WDR8, contains WD repeats [General function prediction only]
Probab=98.30 E-value=7.4e-06 Score=69.39 Aligned_cols=132 Identities=17% Similarity=0.256 Sum_probs=91.4
Q ss_pred CCCCeEEEEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCC
Q 036314 195 PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSW 274 (347)
Q Consensus 195 ~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~ 274 (347)
|+++++++.+.- .+.|-|.++-+....+.+-..+..+.+..+....+.....|+.|.+|++.+++- ...+......
T Consensus 18 p~g~yiAs~~~y-rlviRd~~tlq~~qlf~cldki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew---~ckIdeg~ag 93 (447)
T KOG4497|consen 18 PCGNYIASLSRY-RLVIRDSETLQLHQLFLCLDKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEW---YCKIDEGQAG 93 (447)
T ss_pred CCCCeeeeeeee-EEEEeccchhhHHHHHHHHHHhhheeeeccceeeeeeeeccceEEEEEeeccee---EEEeccCCCc
Confidence 788999988755 788888877554333323334444555555555666667889999999986432 3455567778
Q ss_pred eeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeecC-CCEEEE
Q 036314 275 ISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVIS 331 (347)
Q Consensus 275 v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s 331 (347)
+.++.|||+|+..|.+...|-+|.+|.+.+.. ..-+..-+..+..++|++ |++.|-
T Consensus 94 ls~~~WSPdgrhiL~tseF~lriTVWSL~t~~-~~~~~~pK~~~kg~~f~~dg~f~ai 150 (447)
T KOG4497|consen 94 LSSISWSPDGRHILLTSEFDLRITVWSLNTQK-GYLLPHPKTNVKGYAFHPDGQFCAI 150 (447)
T ss_pred ceeeeECCCcceEeeeecceeEEEEEEeccce-eEEecccccCceeEEECCCCceeee
Confidence 99999999998888888999999999998743 222332234557788875 555443
No 297
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=98.28 E-value=0.00029 Score=62.88 Aligned_cols=119 Identities=12% Similarity=0.128 Sum_probs=90.2
Q ss_pred CCCcCCceeeccCC-CCCEEEEEecCC-eEEEEcCCCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEec
Q 036314 20 PSLHDDWVSAVDGS-NPGFILTGCYDN-LGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKF 97 (347)
Q Consensus 20 ~~~h~~~v~~~~~~-~~~~l~sg~~d~-~i~iw~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~ 97 (347)
..+|...|.=..+. ++.-++-|-.|| .+-++|..+..++.+.+.-+.|.++..++++ +.++.+....++.+.|+
T Consensus 355 qv~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~kr~e~~lg~I~av~vs~dG----K~~vvaNdr~el~vidi 430 (668)
T COG4946 355 QVGKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEVKRIEKDLGNIEAVKVSPDG----KKVVVANDRFELWVIDI 430 (668)
T ss_pred EcCCCCceEEEEEccCCcceEEeccCCceEEEEecCCceEEEeeCCccceEEEEEcCCC----cEEEEEcCceEEEEEEe
Confidence 55788888877765 555788888898 8999998877777888888999999999843 46777777788888899
Q ss_pred cccccccCccccceeeeeeccccceEEEEEeCCCCEEEEe----eCCCcEEEEecCCC
Q 036314 98 DAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSG----SWDCTISLWRTNDS 151 (347)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sg----s~Dg~I~iwd~~~~ 151 (347)
++++.. .+. +.-.+-|+..+|+|+++++|-+ =.-..|+++|+..+
T Consensus 431 dngnv~-------~id--kS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~ 479 (668)
T COG4946 431 DNGNVR-------LID--KSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGG 479 (668)
T ss_pred cCCCee-------Eec--ccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCC
Confidence 887531 111 2235668899999999999854 44567999998764
No 298
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=98.24 E-value=0.0019 Score=57.50 Aligned_cols=111 Identities=11% Similarity=0.109 Sum_probs=70.3
Q ss_pred CCCeEEEEecCCcEEEEECCCCc-----eeeeeeeC--------eeeEEEEeeCCCCcEEEEe---------cCCCcEEE
Q 036314 196 QQETIYSASWDHSVRTWDVEMGK-----DLSDIFCG--------KALNCIDIGGEGSALIAAG---------GSDPILRI 253 (347)
Q Consensus 196 ~~~~l~s~s~dg~v~vwd~~~~~-----~~~~~~~~--------~~~~~~~~~~~~~~~la~~---------~~d~~i~i 253 (347)
++.+++.. ..|+|.+-|+.... ....+... .....++++++++.+++.. ...+.|.+
T Consensus 205 dg~~~~vs-~eG~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~V 283 (352)
T TIGR02658 205 SGRLVWPT-YTGKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFV 283 (352)
T ss_pred CCcEEEEe-cCCeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEE
Confidence 55555544 44999999964332 12211111 1223478887777666533 12268999
Q ss_pred EeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEe-CCCcEEEEEcCCCccceee
Q 036314 254 WDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISAS-YDGKVMLWDLRTAWPLSVI 311 (347)
Q Consensus 254 wd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s-~D~~i~lwd~~~~~~~~~~ 311 (347)
+|....+ .+..+. -...+..++++||+..+|.+.. .++.|.+.|..+++.++++
T Consensus 284 iD~~t~k---vi~~i~-vG~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t~k~i~~i 338 (352)
T TIGR02658 284 VDAKTGK---RLRKIE-LGHEIDSINVSQDAKPLLYALSTGDKTLYIFDAETGKELSSV 338 (352)
T ss_pred EECCCCe---EEEEEe-CCCceeeEEECCCCCeEEEEeCCCCCcEEEEECcCCeEEeee
Confidence 9987532 234433 2347889999999984455554 7889999999999888776
No 299
>KOG1832 consensus HIV-1 Vpr-binding protein [Cell cycle control, cell division, chromosome partitioning]
Probab=98.24 E-value=8.9e-07 Score=83.85 Aligned_cols=195 Identities=15% Similarity=0.240 Sum_probs=121.2
Q ss_pred EEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEe
Q 036314 58 HILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSG 137 (347)
Q Consensus 58 ~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sg 137 (347)
+.|..|+...++++|+... .+|+.|+..|+|+++++.+|.. .....+|.++|+-+.-+.||...++.
T Consensus 1095 ~~frd~~~~fTc~afs~~~----~hL~vG~~~Geik~~nv~sG~~---------e~s~ncH~SavT~vePs~dgs~~Lts 1161 (1516)
T KOG1832|consen 1095 RSFRDETALFTCIAFSGGT----NHLAVGSHAGEIKIFNVSSGSM---------EESVNCHQSAVTLVEPSVDGSTQLTS 1161 (1516)
T ss_pred hhhhccccceeeEEeecCC----ceEEeeeccceEEEEEccCccc---------cccccccccccccccccCCcceeeee
Confidence 4678899999999998743 3689999999999999988742 23456899999999888899766654
Q ss_pred e-CCC-cEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeCCCCe-EEEEecCCcEEEEEC
Q 036314 138 S-WDC-TISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQET-IYSASWDHSVRTWDV 214 (347)
Q Consensus 138 s-~Dg-~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~dg~v~vwd~ 214 (347)
+ +.. -..+|++..-. ....++.+ -.++.|++..+ -+.|.......+||+
T Consensus 1162 ss~S~PlsaLW~~~s~~------------------------~~~Hsf~e----d~~vkFsn~~q~r~~gt~~d~a~~YDv 1213 (1516)
T KOG1832|consen 1162 SSSSSPLSALWDASSTG------------------------GPRHSFDE----DKAVKFSNSLQFRALGTEADDALLYDV 1213 (1516)
T ss_pred ccccCchHHHhcccccc------------------------Cccccccc----cceeehhhhHHHHHhcccccceEEEec
Confidence 3 333 46788875310 01111111 12344543221 122333356889999
Q ss_pred CCCceeeeeeeC-----eeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEE
Q 036314 215 EMGKDLSDIFCG-----KALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLI 289 (347)
Q Consensus 215 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~ 289 (347)
.++..+.++..+ ..-++..|+|.+. ++. .|| -+||.|.+. .+..|...+.++. =.|+|.|.. ++
T Consensus 1214 qT~~~l~tylt~~~~~~y~~n~a~FsP~D~-LIl---ndG--vLWDvR~~~---aIh~FD~ft~~~~-G~FHP~g~e-VI 1282 (1516)
T KOG1832|consen 1214 QTCSPLQTYLTDTVTSSYSNNLAHFSPCDT-LIL---NDG--VLWDVRIPE---AIHRFDQFTDYGG-GGFHPSGNE-VI 1282 (1516)
T ss_pred ccCcHHHHhcCcchhhhhhccccccCCCcc-eEe---eCc--eeeeeccHH---HHhhhhhheeccc-ccccCCCce-EE
Confidence 999877664321 2346778877664 433 355 379998642 2444433333222 238898865 44
Q ss_pred EEeCCCcEEEEEcCCCccce
Q 036314 290 SASYDGKVMLWDLRTAWPLS 309 (347)
Q Consensus 290 s~s~D~~i~lwd~~~~~~~~ 309 (347)
--+ .|||+|+...++
T Consensus 1283 INS-----EIwD~RTF~lLh 1297 (1516)
T KOG1832|consen 1283 INS-----EIWDMRTFKLLH 1297 (1516)
T ss_pred eec-----hhhhhHHHHHHh
Confidence 434 389999865443
No 300
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=98.22 E-value=0.0022 Score=64.75 Aligned_cols=233 Identities=12% Similarity=0.136 Sum_probs=132.3
Q ss_pred cCCceeeccCC-CCCEEEEEec---C---CeEEEEcCCCeEEEEeeccCCceEEEEEeecCCCceEEEEEccC---CCcE
Q 036314 23 HDDWVSAVDGS-NPGFILTGCY---D---NLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASK---DQTL 92 (347)
Q Consensus 23 h~~~v~~~~~~-~~~~l~sg~~---d---~~i~iw~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~---Dg~v 92 (347)
+.+.-..+... ||.|+|..+. + ..+|+|+..|....+-..-.+--.+++|.|.++ .+|+... ...|
T Consensus 208 ~dd~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~ReG~L~stSE~v~gLe~~l~WrPsG~----lIA~~q~~~~~~~V 283 (928)
T PF04762_consen 208 WDDGRVRISWRGDGEYFAVSSVEPETGSRRVIRVYSREGELQSTSEPVDGLEGALSWRPSGN----LIASSQRLPDRHDV 283 (928)
T ss_pred cCCCceEEEECCCCcEEEEEEEEcCCCceeEEEEECCCceEEeccccCCCccCCccCCCCCC----EEEEEEEcCCCcEE
Confidence 55555566665 6678888775 2 479999988865444443333345788988664 4666543 3567
Q ss_pred EEEeccccccccCccccceeeeee--ccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccc
Q 036314 93 RLWKFDAEELVNHPKKIRSFKILR--GHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVE 170 (347)
Q Consensus 93 ~~wd~~~~~~~~~~~~~~~~~~~~--~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~ 170 (347)
..|+.+.-+. --..++ .....|..+.|++|+..||..-.|. |.+|...+-..
T Consensus 284 vFfErNGLrh--------geF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~~-vqLWt~~NYHW----------------- 337 (928)
T PF04762_consen 284 VFFERNGLRH--------GEFTLRFDPEEEKVIELAWNSDSEILAVWLEDR-VQLWTRSNYHW----------------- 337 (928)
T ss_pred EEEecCCcEe--------eeEecCCCCCCceeeEEEECCCCCEEEEEecCC-ceEEEeeCCEE-----------------
Confidence 7777654321 011222 3466789999999999999877665 99997654210
Q ss_pred cccccccccccccCC-ccceEEEEeCC--CCeEEEEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecC
Q 036314 171 EPQLEGEAISTLVGH-TQCVSSVVWPQ--QETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGS 247 (347)
Q Consensus 171 ~~~~~~~~~~~~~~h-~~~v~~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~ 247 (347)
.+ .+.+... ...+..+.|++ ...|.....++.+..++..-... .+. ...+.+...+++ -+
T Consensus 338 --YL----Kqei~~~~~~~~~~~~Wdpe~p~~L~v~t~~g~~~~~~~~~~v~-----~s~-----~~~~~D~g~vaV-ID 400 (928)
T PF04762_consen 338 --YL----KQEIRFSSSESVNFVKWDPEKPLRLHVLTSNGQYEIYDFAWDVS-----RSP-----GSSPNDNGTVAV-ID 400 (928)
T ss_pred --EE----EEEEEccCCCCCCceEECCCCCCEEEEEecCCcEEEEEEEEEEE-----ecC-----CCCccCceEEEE-Ee
Confidence 00 0111111 11223366642 23455555556666554321000 000 001112222222 23
Q ss_pred CCcEEEEeCCCCCCCCCe--EEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCC
Q 036314 248 DPILRIWDPRKPGTSAPV--FQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRT 304 (347)
Q Consensus 248 d~~i~iwd~~~~~~~~~~--~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~ 304 (347)
..++.+-+++...-|.|+ +.+. -...|.+++|++++.. +++-..||+|.+|.+..
T Consensus 401 G~~lllTpf~~a~VPPPMs~~~l~-~~~~v~~vaf~~~~~~-~avl~~d~~l~~~~~~~ 457 (928)
T PF04762_consen 401 GNKLLLTPFRRAVVPPPMSSYELE-LPSPVNDVAFSPSNSR-FAVLTSDGSLSIYEWDL 457 (928)
T ss_pred CCeEEEecccccCCCchHhceEEc-CCCCcEEEEEeCCCCe-EEEEECCCCEEEEEecC
Confidence 456667666654333333 3443 3457999999998764 88889999999998543
No 301
>KOG1275 consensus PAB-dependent poly(A) ribonuclease, subunit PAN2 [Replication, recombination and repair]
Probab=98.21 E-value=6.3e-05 Score=71.97 Aligned_cols=194 Identities=15% Similarity=0.187 Sum_probs=126.2
Q ss_pred CCCEEEEEecCCeEEEEcCCCeEEEEeec-cCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCcccccee
Q 036314 34 NPGFILTGCYDNLGRVWKAGGVCTHILEG-HCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSF 112 (347)
Q Consensus 34 ~~~~l~sg~~d~~i~iw~~~~~~~~~l~~-h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~ 112 (347)
++..++-||.-..+...|..+.+...... ..+. +.+.+..+ +.+.+|...|+|-+-|..+ .+.+
T Consensus 146 ~~~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~a~~---v~imR~Nn---r~lf~G~t~G~V~LrD~~s---------~~~i 210 (1118)
T KOG1275|consen 146 GPSTLIMGGLQEKLIHIDLNTEKETRTTNVSASG---VTIMRYNN---RNLFCGDTRGTVFLRDPNS---------FETI 210 (1118)
T ss_pred CCcceeecchhhheeeeecccceeeeeeeccCCc---eEEEEecC---cEEEeecccceEEeecCCc---------Ccee
Confidence 34456666666666666765444332221 1112 33444333 4688888899999888654 3467
Q ss_pred eeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEE
Q 036314 113 KILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSV 192 (347)
Q Consensus 113 ~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 192 (347)
.++.+|++.|.+. +-.|+.|+++|..+.- +
T Consensus 211 ht~~aHs~siSDf--Dv~GNlLitCG~S~R~--~---------------------------------------------- 240 (1118)
T KOG1275|consen 211 HTFDAHSGSISDF--DVQGNLLITCGYSMRR--Y---------------------------------------------- 240 (1118)
T ss_pred eeeeccccceeee--eccCCeEEEeeccccc--c----------------------------------------------
Confidence 7888999888654 4558888888743211 0
Q ss_pred EeCCCCeEEEEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCC-CCCeEEecCC
Q 036314 193 VWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGT-SAPVFQFSSH 271 (347)
Q Consensus 193 ~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~-~~~~~~~~~h 271 (347)
.+ ..|.-|+|||++.-+.+..++......-+.|.|.=...++.++..|...+-|...-.. ...++.+..-
T Consensus 241 ------~l---~~D~FvkVYDLRmmral~PI~~~~~P~flrf~Psl~t~~~V~S~sGq~q~vd~~~lsNP~~~~~~v~p~ 311 (1118)
T KOG1275|consen 241 ------NL---AMDPFVKVYDLRMMRALSPIQFPYGPQFLRFHPSLTTRLAVTSQSGQFQFVDTATLSNPPAGVKMVNPN 311 (1118)
T ss_pred ------cc---cccchhhhhhhhhhhccCCcccccCchhhhhcccccceEEEEecccceeeccccccCCCccceeEEccC
Confidence 11 2477899999998776666654443344455555455678888899999999432212 2334555566
Q ss_pred CCCeeEEEeCCCCCeEEEEEeCCCcEEEEEc
Q 036314 272 NSWISACKWHNKSWFHLISASYDGKVMLWDL 302 (347)
Q Consensus 272 ~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~ 302 (347)
.+.+..+.+++.+. .||-|..+|.|.+|--
T Consensus 312 ~s~i~~fDiSsn~~-alafgd~~g~v~~wa~ 341 (1118)
T KOG1275|consen 312 GSGISAFDISSNGD-ALAFGDHEGHVNLWAD 341 (1118)
T ss_pred CCcceeEEecCCCc-eEEEecccCcEeeecC
Confidence 67799999999986 5999999999999973
No 302
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=98.21 E-value=0.00061 Score=61.33 Aligned_cols=259 Identities=19% Similarity=0.245 Sum_probs=141.5
Q ss_pred eeeccCC-CCCEEEEEecCC---------------eEEEEcCC-CeEEEEeeccCCc--eE-EEEEeecCCCceEEEEEc
Q 036314 27 VSAVDGS-NPGFILTGCYDN---------------LGRVWKAG-GVCTHILEGHCGA--VS-SVNIIKSDGLKYVTVATA 86 (347)
Q Consensus 27 v~~~~~~-~~~~l~sg~~d~---------------~i~iw~~~-~~~~~~l~~h~~~--V~-~v~~~~~~~~~~~~l~s~ 86 (347)
|.-+.|+ ++.||+|=+..+ .+-+||.. |..+..+.+...+ .. -+.|+.++..-. .|
T Consensus 74 V~~~~fSP~~kYL~tw~~~pi~~pe~e~sp~~~~n~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~A-Rv--- 149 (561)
T COG5354 74 VKYLDFSPNEKYLVTWSREPIIEPEIEISPFTSKNNVFVWDIASGMIVFSFNGISQPYLGWPVLKFSIDDKYVA-RV--- 149 (561)
T ss_pred ceecccCcccceeeeeccCCccChhhccCCccccCceeEEeccCceeEeeccccCCcccccceeeeeecchhhh-hh---
Confidence 5566777 456888866543 48899964 6777777766554 33 566776543211 12
Q ss_pred cCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCC--CEEE-----EeeCCCcEEEEecCCCCCCCccce
Q 036314 87 SKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSG--NMVC-----SGSWDCTISLWRTNDSDAAGNQVS 159 (347)
Q Consensus 87 s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~--~~l~-----sgs~Dg~I~iwd~~~~~~~~~~~~ 159 (347)
-...+.++++ +..... .+.+.++ ...+...+++|.+ ..|+ ..+.++++++|.+........ ..
T Consensus 150 -v~~sl~i~e~-t~n~~~-----~p~~~lr--~~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~t-k~ 219 (561)
T COG5354 150 -VGSSLYIHEI-TDNIEE-----HPFKNLR--PVGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVT-KN 219 (561)
T ss_pred -ccCeEEEEec-CCcccc-----Cchhhcc--ccceeeEEecCCCCCceEEEEccccCCCCcEEEEEEccCCCeeee-ee
Confidence 2236999997 333221 1222222 2446666777763 3333 368889999998874321100 00
Q ss_pred eee----------------------ccCCC------ccccccccccccccccCCccceEEEEe-CCCCe--EEEEecCCc
Q 036314 160 IKK----------------------RKGNN------QVEEPQLEGEAISTLVGHTQCVSSVVW-PQQET--IYSASWDHS 208 (347)
Q Consensus 160 ~~~----------------------~~~~~------~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~--l~s~s~dg~ 208 (347)
..+ .+.+. .++.-..+...+.....-.++|..++| |.+.. +++|..+-.
T Consensus 220 lfk~~~~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~i~V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa~ 299 (561)
T COG5354 220 LFKVSGVQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRITERSIPVEKDLKDPVHDFTWEPLSSRFAVISGYMPAS 299 (561)
T ss_pred eEeecccEEEEecCCceEEEEEEEeeecccceeccceEEEEeecccccceeccccccceeeeecccCCceeEEecccccc
Confidence 000 00000 000001111122222344678999999 44444 566678889
Q ss_pred EEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEec--CCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCe
Q 036314 209 VRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGG--SDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWF 286 (347)
Q Consensus 209 v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~--~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~ 286 (347)
+.++|++.. +........-+.+.|+|.....|.+|- ..|.+.+||... +......+.+-. ..-|.|+|++..
T Consensus 300 ~s~~~lr~N--l~~~~Pe~~rNT~~fsp~~r~il~agF~nl~gni~i~~~~~--rf~~~~~~~~~n--~s~~~wspd~qF 373 (561)
T COG5354 300 VSVFDLRGN--LRFYFPEQKRNTIFFSPHERYILFAGFDNLQGNIEIFDPAG--RFKVAGAFNGLN--TSYCDWSPDGQF 373 (561)
T ss_pred eeecccccc--eEEecCCcccccccccCcccEEEEecCCccccceEEeccCC--ceEEEEEeecCC--ceEeeccCCceE
Confidence 999999865 332222333345666665544444432 247899999763 222232343332 355889999975
Q ss_pred EEEEE-e----CCCcEEEEEcCCC
Q 036314 287 HLISA-S----YDGKVMLWDLRTA 305 (347)
Q Consensus 287 ~l~s~-s----~D~~i~lwd~~~~ 305 (347)
+.... | .|..|+|||+...
T Consensus 374 ~~~~~ts~k~~~Dn~i~l~~v~g~ 397 (561)
T COG5354 374 YDTDTTSEKLRVDNSIKLWDVYGA 397 (561)
T ss_pred EEecCCCcccccCcceEEEEecCc
Confidence 43322 2 2788999999753
No 303
>KOG1912 consensus WD40 repeat protein [General function prediction only]
Probab=98.19 E-value=0.00032 Score=66.24 Aligned_cols=236 Identities=13% Similarity=0.191 Sum_probs=150.5
Q ss_pred eEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCC------------CCEE
Q 036314 67 VSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETS------------GNMV 134 (347)
Q Consensus 67 V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~------------~~~l 134 (347)
-.+++|++.+ .+|=|+. ..|-+-|..+- +.++.+.-|...|+.|.|.|- ..+|
T Consensus 18 ~~A~Dw~~~G-----LiAygsh-slV~VVDs~s~---------q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lli 82 (1062)
T KOG1912|consen 18 RNAADWSPSG-----LIAYGSH-SLVSVVDSRSL---------QLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLI 82 (1062)
T ss_pred ccccccCccc-----eEEEecC-ceEEEEehhhh---------hhhhccccCccceeEEEeccCCCchhccCccccceeE
Confidence 4678888743 3454444 36777775433 345667789999999988642 2467
Q ss_pred EEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe----CCC-CeEEEEecCCcE
Q 036314 135 CSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW----PQQ-ETIYSASWDHSV 209 (347)
Q Consensus 135 ~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~----~~~-~~l~s~s~dg~v 209 (347)
|++...|.|.+||.... ..+..+..|.+.+..+.| ++. ..|+....-.++
T Consensus 83 AsaD~~GrIil~d~~~~-------------------------s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~l 137 (1062)
T KOG1912|consen 83 ASADISGRIILVDFVLA-------------------------SVINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTL 137 (1062)
T ss_pred EeccccCcEEEEEehhh-------------------------hhhhhhcCCCcchhheeeeeccCcchheeEEecCCcEE
Confidence 78888899999997542 223455667778888887 233 457777888899
Q ss_pred EEEECCCCceeeeee-eCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCC---CCCCCCeEEe-cCCCC-----------
Q 036314 210 RTWDVEMGKDLSDIF-CGKALNCIDIGGEGSALIAAGGSDPILRIWDPRK---PGTSAPVFQF-SSHNS----------- 273 (347)
Q Consensus 210 ~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~---~~~~~~~~~~-~~h~~----------- 273 (347)
.+|+..+|...=+.. .+....|+.+.|-+.+.+..-+..|.+-+-+.-. +..+...+++ ..|.+
T Consensus 138 vLwntdtG~k~Wk~~ys~~iLs~f~~DPfd~rh~~~l~s~g~vl~~~~l~~sep~~pgk~~qI~sd~Sdl~~lere~at~ 217 (1062)
T KOG1912|consen 138 VLWNTDTGEKFWKYDYSHEILSCFRVDPFDSRHFCVLGSKGFVLSCKDLGLSEPDVPGKEFQITSDHSDLAHLERETATG 217 (1062)
T ss_pred EEEEccCCceeeccccCCcceeeeeeCCCCcceEEEEccCceEEEEeccCCCCCCCCceeEEEecCccchhhhhhhhhcc
Confidence 999999887653322 3456788888888777776666677776665321 1111112222 22222
Q ss_pred --------------CeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeecC-CC--EEEEccCCc
Q 036314 274 --------------WISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GD--SVISGGVDS 336 (347)
Q Consensus 274 --------------~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~-~~--~l~s~s~D~ 336 (347)
+...++|+|.-.. ++=......+.|+|++-..++.+..-..+.+.-++|-| ++ .|-..=.||
T Consensus 218 ns~ts~~~sa~fity~a~faf~p~~rn-~lfi~~prellv~dle~~~~l~vvpier~~akfv~vlP~~~rd~LfclH~nG 296 (1062)
T KOG1912|consen 218 NSTTSTPASAYFITYCAQFAFSPHWRN-ILFITFPRELLVFDLEYECCLAVVPIERGGAKFVDVLPDPRRDALFCLHSNG 296 (1062)
T ss_pred ccccCCCcchhHHHHHHhhhcChhhhc-eEEEEeccceEEEcchhhceeEEEEeccCCcceeEeccCCCcceEEEEecCC
Confidence 1122566776544 33345667899999998888777544444444556633 33 366777899
Q ss_pred eEEEeec
Q 036314 337 KLCVSSG 343 (347)
Q Consensus 337 ~v~vw~~ 343 (347)
.+.+|..
T Consensus 297 ~ltirvr 303 (1062)
T KOG1912|consen 297 RLTIRVR 303 (1062)
T ss_pred eEEEEEe
Confidence 9999974
No 304
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=98.13 E-value=0.0045 Score=53.64 Aligned_cols=268 Identities=12% Similarity=0.123 Sum_probs=148.4
Q ss_pred CCCcCCceeeccCCCC-CEEEEEecC---CeEEEEcC--C-CeEEE----EeeccCCceEEEEEeecCCCceEEEEEc-c
Q 036314 20 PSLHDDWVSAVDGSNP-GFILTGCYD---NLGRVWKA--G-GVCTH----ILEGHCGAVSSVNIIKSDGLKYVTVATA-S 87 (347)
Q Consensus 20 ~~~h~~~v~~~~~~~~-~~l~sg~~d---~~i~iw~~--~-~~~~~----~l~~h~~~V~~v~~~~~~~~~~~~l~s~-s 87 (347)
...+....+-+++++. +.|.++-.+ |.|--+.. . |.... .+.|+. -..+++++++. +|+++ .
T Consensus 35 ~v~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~--p~yvsvd~~g~----~vf~AnY 108 (346)
T COG2706 35 LVAELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSP--PCYVSVDEDGR----FVFVANY 108 (346)
T ss_pred hccccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCC--CeEEEECCCCC----EEEEEEc
Confidence 4456677777887744 466666554 55555543 2 44322 122332 26677777442 44444 4
Q ss_pred CCCcEEEEeccc-cccccCccccceeeeeeccccc----------eEEEEEeCCCCEEEEe--eCCCcEEEEecCCCCCC
Q 036314 88 KDQTLRLWKFDA-EELVNHPKKIRSFKILRGHKAS----------VHSIAAETSGNMVCSG--SWDCTISLWRTNDSDAA 154 (347)
Q Consensus 88 ~Dg~v~~wd~~~-~~~~~~~~~~~~~~~~~~h~~~----------V~~v~~s~~~~~l~sg--s~Dg~I~iwd~~~~~~~ 154 (347)
.-|.|.++.+.. +.+. .......|..+ ++...|.|+++++++. +.| .|.+|++.++...
T Consensus 109 ~~g~v~v~p~~~dG~l~-------~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~D-ri~~y~~~dg~L~ 180 (346)
T COG2706 109 HSGSVSVYPLQADGSLQ-------PVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTD-RIFLYDLDDGKLT 180 (346)
T ss_pred cCceEEEEEcccCCccc-------cceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCc-eEEEEEcccCccc
Confidence 568999999865 3221 11112234444 8889999999998876 455 6889998865332
Q ss_pred CccceeeeccCCCccccccccccccccccCCccceEEEEe-CCCCeEE-EEecCCcEEEEECCCC-ceeeeeee------
Q 036314 155 GNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIY-SASWDHSVRTWDVEMG-KDLSDIFC------ 225 (347)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~-s~s~dg~v~vwd~~~~-~~~~~~~~------ 225 (347)
..... .++ ....-+-++| |+++..+ ..=.+++|.+|..... ..+..++.
T Consensus 181 ~~~~~---------------------~v~-~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~ 238 (346)
T COG2706 181 PADPA---------------------EVK-PGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPE 238 (346)
T ss_pred ccccc---------------------ccC-CCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCcc
Confidence 11100 001 1112244666 5666643 4456889999988763 22333321
Q ss_pred ----CeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCC-CCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEE
Q 036314 226 ----GKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGT-SAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLW 300 (347)
Q Consensus 226 ----~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~-~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lw 300 (347)
......+.+++++.-+.|+--....|.+|.+..... .......+-+...-+...++|.+..++|+.-.+..|.+|
T Consensus 239 dF~g~~~~aaIhis~dGrFLYasNRg~dsI~~f~V~~~~g~L~~~~~~~teg~~PR~F~i~~~g~~Liaa~q~sd~i~vf 318 (346)
T COG2706 239 DFTGTNWAAAIHISPDGRFLYASNRGHDSIAVFSVDPDGGKLELVGITPTEGQFPRDFNINPSGRFLIAANQKSDNITVF 318 (346)
T ss_pred ccCCCCceeEEEECCCCCEEEEecCCCCeEEEEEEcCCCCEEEEEEEeccCCcCCccceeCCCCCEEEEEccCCCcEEEE
Confidence 123455677666554444443455888887764322 112233344555567889999997655555556689999
Q ss_pred EcCC--Cccceeec-CCCCeEEEEee
Q 036314 301 DLRT--AWPLSVID-SHKDKVLCADW 323 (347)
Q Consensus 301 d~~~--~~~~~~~~-~h~~~v~~~~~ 323 (347)
.++. |+...... .+.....||.|
T Consensus 319 ~~d~~TG~L~~~~~~~~~p~Pvcv~f 344 (346)
T COG2706 319 ERDKETGRLTLLGRYAVVPEPVCVKF 344 (346)
T ss_pred EEcCCCceEEecccccCCCCcEEEEE
Confidence 8764 33211111 22334566666
No 305
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=98.10 E-value=0.0027 Score=53.66 Aligned_cols=215 Identities=16% Similarity=0.093 Sum_probs=113.6
Q ss_pred CCeEEEEcC-CCeEEEEeec---cCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeecc-
Q 036314 44 DNLGRVWKA-GGVCTHILEG---HCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGH- 118 (347)
Q Consensus 44 d~~i~iw~~-~~~~~~~l~~---h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h- 118 (347)
+|+|+.||. .|+.+....- ....+ +. ..+.++ .+++++.++.|..||..+++.+-. ..+.+.
T Consensus 2 ~g~l~~~d~~tG~~~W~~~~~~~~~~~~-~~-~~~~~~----~v~~~~~~~~l~~~d~~tG~~~W~-------~~~~~~~ 68 (238)
T PF13360_consen 2 DGTLSALDPRTGKELWSYDLGPGIGGPV-AT-AVPDGG----RVYVASGDGNLYALDAKTGKVLWR-------FDLPGPI 68 (238)
T ss_dssp TSEEEEEETTTTEEEEEEECSSSCSSEE-ET-EEEETT----EEEEEETTSEEEEEETTTSEEEEE-------EECSSCG
T ss_pred CCEEEEEECCCCCEEEEEECCCCCCCcc-ce-EEEeCC----EEEEEcCCCEEEEEECCCCCEEEE-------eeccccc
Confidence 678899997 6776665432 22222 11 222232 467778999999999987764211 011111
Q ss_pred ccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeCCCC
Q 036314 119 KASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQE 198 (347)
Q Consensus 119 ~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 198 (347)
... . ..++..++.++.|+.+..+|..++...... .... . ... ...... ... ..++
T Consensus 69 ~~~----~-~~~~~~v~v~~~~~~l~~~d~~tG~~~W~~----~~~~-~---------~~~---~~~~~~--~~~-~~~~ 123 (238)
T PF13360_consen 69 SGA----P-VVDGGRVYVGTSDGSLYALDAKTGKVLWSI----YLTS-S---------PPA---GVRSSS--SPA-VDGD 123 (238)
T ss_dssp GSG----E-EEETTEEEEEETTSEEEEEETTTSCEEEEE----EE-S-S---------CTC---STB--S--EEE-EETT
T ss_pred cce----e-eecccccccccceeeeEecccCCcceeeee----cccc-c---------ccc---cccccc--Cce-EecC
Confidence 111 1 123455666778889999997776431110 0000 0 000 000001 111 1367
Q ss_pred eEEEEecCCcEEEEECCCCceeeeeeeCe-e-----------eEEEEeeCCCCcEEEEecCCCc-EEEEeCCCCCCCCCe
Q 036314 199 TIYSASWDHSVRTWDVEMGKDLSDIFCGK-A-----------LNCIDIGGEGSALIAAGGSDPI-LRIWDPRKPGTSAPV 265 (347)
Q Consensus 199 ~l~s~s~dg~v~vwd~~~~~~~~~~~~~~-~-----------~~~~~~~~~~~~~la~~~~d~~-i~iwd~~~~~~~~~~ 265 (347)
.++.+..++.|..+|+++|+.+-...... . ...+.+ .++ .+..+..++. +.+ |++... .+
T Consensus 124 ~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~v~~~~~~g~~~~~-d~~tg~---~~ 196 (238)
T PF13360_consen 124 RLYVGTSSGKLVALDPKTGKLLWKYPVGEPRGSSPISSFSDINGSPVI--SDG-RVYVSSGDGRVVAV-DLATGE---KL 196 (238)
T ss_dssp EEEEEETCSEEEEEETTTTEEEEEEESSTT-SS--EEEETTEEEEEEC--CTT-EEEEECCTSSEEEE-ETTTTE---EE
T ss_pred EEEEEeccCcEEEEecCCCcEEEEeecCCCCCCcceeeecccccceEE--ECC-EEEEEcCCCeEEEE-ECCCCC---EE
Confidence 78888889999999999998765543322 1 112222 233 4444555664 555 887532 12
Q ss_pred EEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCcc
Q 036314 266 FQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWP 307 (347)
Q Consensus 266 ~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~ 307 (347)
... .......+ ..+.+.. |+.++.++.+..||+++++.
T Consensus 197 w~~--~~~~~~~~-~~~~~~~-l~~~~~~~~l~~~d~~tG~~ 234 (238)
T PF13360_consen 197 WSK--PISGIYSL-PSVDGGT-LYVTSSDGRLYALDLKTGKV 234 (238)
T ss_dssp EEE--CSS-ECEC-EECCCTE-EEEEETTTEEEEEETTTTEE
T ss_pred EEe--cCCCccCC-ceeeCCE-EEEEeCCCEEEEEECCCCCE
Confidence 222 22223332 2244444 66666999999999999864
No 306
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=98.07 E-value=0.0054 Score=52.23 Aligned_cols=212 Identities=14% Similarity=0.088 Sum_probs=120.9
Q ss_pred EEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEe-CCCCEEEEeeCCCcEEEEec
Q 036314 70 VNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAE-TSGNMVCSGSWDCTISLWRT 148 (347)
Q Consensus 70 v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s-~~~~~l~sgs~Dg~I~iwd~ 148 (347)
+.|.+..+ .++.+.-..+.|..|+..+++. ..+.. .....+++. +++.+++ +..+ .+.++|.
T Consensus 5 p~~d~~~g---~l~~~D~~~~~i~~~~~~~~~~----------~~~~~--~~~~G~~~~~~~g~l~v-~~~~-~~~~~d~ 67 (246)
T PF08450_consen 5 PVWDPRDG---RLYWVDIPGGRIYRVDPDTGEV----------EVIDL--PGPNGMAFDRPDGRLYV-ADSG-GIAVVDP 67 (246)
T ss_dssp EEEETTTT---EEEEEETTTTEEEEEETTTTEE----------EEEES--SSEEEEEEECTTSEEEE-EETT-CEEEEET
T ss_pred eEEECCCC---EEEEEEcCCCEEEEEECCCCeE----------EEEec--CCCceEEEEccCCEEEE-EEcC-ceEEEec
Confidence 45554322 3566666778899998876532 11221 126677777 6655555 4444 4455576
Q ss_pred CCCCCCCccceeeeccCCCccccccccccccccc--cC-CccceEEEEe-CCCCeEEEEecC--------CcEEEEECCC
Q 036314 149 NDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTL--VG-HTQCVSSVVW-PQQETIYSASWD--------HSVRTWDVEM 216 (347)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-h~~~v~~~~~-~~~~~l~s~s~d--------g~v~vwd~~~ 216 (347)
.++... .+... .. .....+.+++ +++...++.... |.|..++..
T Consensus 68 ~~g~~~-----------------------~~~~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~- 123 (246)
T PF08450_consen 68 DTGKVT-----------------------VLADLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD- 123 (246)
T ss_dssp TTTEEE-----------------------EEEEEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-
T ss_pred CCCcEE-----------------------EEeeccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-
Confidence 653110 01111 11 2234566776 455544444333 446666665
Q ss_pred CceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCC-CC---CeEEecCCCCCeeEEEeCCCCCeEEEEEe
Q 036314 217 GKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGT-SA---PVFQFSSHNSWISACKWHNKSWFHLISAS 292 (347)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~-~~---~~~~~~~h~~~v~~v~~s~~~~~~l~s~s 292 (347)
++.......-...+.+++++++..++++-+..+.|..||+..... .. ....+.........+++..+|. +.++.-
T Consensus 124 ~~~~~~~~~~~~pNGi~~s~dg~~lyv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~-l~va~~ 202 (246)
T PF08450_consen 124 GKVTVVADGLGFPNGIAFSPDGKTLYVADSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGN-LWVADW 202 (246)
T ss_dssp SEEEEEEEEESSEEEEEEETTSSEEEEEETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS--EEEEEE
T ss_pred CeEEEEecCcccccceEECCcchheeecccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCC-EEEEEc
Confidence 433222222234578899888776777888889999999864332 11 1122233333467789988884 455555
Q ss_pred CCCcEEEEEcCCCccceeecCCCCeEEEEeec
Q 036314 293 YDGKVMLWDLRTAWPLSVIDSHKDKVLCADWW 324 (347)
Q Consensus 293 ~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~ 324 (347)
..+.|.++|.+ |+.+..+.--...+++++|.
T Consensus 203 ~~~~I~~~~p~-G~~~~~i~~p~~~~t~~~fg 233 (246)
T PF08450_consen 203 GGGRIVVFDPD-GKLLREIELPVPRPTNCAFG 233 (246)
T ss_dssp TTTEEEEEETT-SCEEEEEE-SSSSEEEEEEE
T ss_pred CCCEEEEECCC-ccEEEEEcCCCCCEEEEEEE
Confidence 78899999998 77777665444588999994
No 307
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=98.02 E-value=0.0033 Score=52.84 Aligned_cols=192 Identities=9% Similarity=0.071 Sum_probs=105.3
Q ss_pred eeccCCC-CCEEEEEecCCeEEEEcCCCeEEEEeecc-------CCceEEEEEeecCCCc--eEEEEEccCCCcEEEEec
Q 036314 28 SAVDGSN-PGFILTGCYDNLGRVWKAGGVCTHILEGH-------CGAVSSVNIIKSDGLK--YVTVATASKDQTLRLWKF 97 (347)
Q Consensus 28 ~~~~~~~-~~~l~sg~~d~~i~iw~~~~~~~~~l~~h-------~~~V~~v~~~~~~~~~--~~~l~s~s~Dg~v~~wd~ 97 (347)
+-+++|+ +.+||-+...|+|+++|+.|..+..+..- ...|..+.|.+..... ...|+.-..+|.++-|-+
T Consensus 47 Rkl~WSpD~tlLa~a~S~G~i~vfdl~g~~lf~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~v 126 (282)
T PF15492_consen 47 RKLAWSPDCTLLAYAESTGTIRVFDLMGSELFVIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLV 126 (282)
T ss_pred eEEEECCCCcEEEEEcCCCeEEEEecccceeEEcCcccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEE
Confidence 4466774 56889899999999999876554443321 2456667676533111 124566678888888887
Q ss_pred cccccccCccccceee--eee-ccccceEEEEEeCCCCEEEEeeC-CC----------cEEEEecCCCCCCCccceeeec
Q 036314 98 DAEELVNHPKKIRSFK--ILR-GHKASVHSIAAETSGNMVCSGSW-DC----------TISLWRTNDSDAAGNQVSIKKR 163 (347)
Q Consensus 98 ~~~~~~~~~~~~~~~~--~~~-~h~~~V~~v~~s~~~~~l~sgs~-Dg----------~I~iwd~~~~~~~~~~~~~~~~ 163 (347)
..++- +..+... .|. .+...|.++.++|..++|+.||. .. -+.-|++-++....+.+.....
T Consensus 127 s~gt~----q~y~e~hsfsf~~~yp~Gi~~~vy~p~h~LLlVgG~~~~~~~~s~a~~~GLtaWRiL~~~Pyyk~v~~~~~ 202 (282)
T PF15492_consen 127 SVGTN----QGYQENHSFSFSSHYPHGINSAVYHPKHRLLLVGGCEQNQDGMSKASSCGLTAWRILSDSPYYKQVTSSED 202 (282)
T ss_pred EcccC----CcceeeEEEEecccCCCceeEEEEcCCCCEEEEeccCCCCCccccccccCceEEEEcCCCCcEEEccccCc
Confidence 43321 1111111 222 24778999999999887765543 22 2455655443322111100000
Q ss_pred cCCCcccc-ccccccccccc---cCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeee
Q 036314 164 KGNNQVEE-PQLEGEAISTL---VGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDI 223 (347)
Q Consensus 164 ~~~~~~~~-~~~~~~~~~~~---~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~ 223 (347)
........ ..+.....+.+ ....+.|..+.. |++..|++.+.+|.|.+|++..-+....+
T Consensus 203 ~~~~~~~~~~~~~~~~~~~fs~~~~~~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~~~~~W 267 (282)
T PF15492_consen 203 DITASSKRRGLLRIPSFKFFSRQGQEQDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLRLQRSW 267 (282)
T ss_pred cccccccccceeeccceeeeeccccCCCceEEEEECCCCCEEEEEEcCCeEEEEecCcchhhccc
Confidence 00000000 00000000001 112456777765 78899999999999999999876655544
No 308
>PRK04043 tolB translocation protein TolB; Provisional
Probab=97.99 E-value=0.0023 Score=58.92 Aligned_cols=175 Identities=6% Similarity=-0.038 Sum_probs=92.9
Q ss_pred ceEEEEEeCCCCE-EEEeeCC---CcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-C
Q 036314 121 SVHSIAAETSGNM-VCSGSWD---CTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-P 195 (347)
Q Consensus 121 ~V~~v~~s~~~~~-l~sgs~D---g~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~ 195 (347)
....-.|+|||+. ++-.+.+ ..|.++|+.++.. ..+.. ..+......| |
T Consensus 189 ~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~-----------------------~~lt~---~~g~~~~~~~SP 242 (419)
T PRK04043 189 LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKK-----------------------EKIAS---SQGMLVVSDVSK 242 (419)
T ss_pred CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcE-----------------------EEEec---CCCcEEeeEECC
Confidence 6677899999984 5543433 4577777754321 11111 1122333445 5
Q ss_pred CCCeEE-EEecC--CcEEEEECCCCceeeeeeeCe-eeEEEEeeCCCCcEEEEecCCC--cEEEEeCCCCCCCCCeEEec
Q 036314 196 QQETIY-SASWD--HSVRTWDVEMGKDLSDIFCGK-ALNCIDIGGEGSALIAAGGSDP--ILRIWDPRKPGTSAPVFQFS 269 (347)
Q Consensus 196 ~~~~l~-s~s~d--g~v~vwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~la~~~~d~--~i~iwd~~~~~~~~~~~~~~ 269 (347)
+++.++ +.+.+ ..|.++|+.++.. ..+.... ......|+|++..++.+....+ .|.+.|+..... . ..+..
T Consensus 243 DG~~la~~~~~~g~~~Iy~~dl~~g~~-~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~-~-rlt~~ 319 (419)
T PRK04043 243 DGSKLLLTMAPKGQPDIYLYDTNTKTL-TQITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSV-E-QVVFH 319 (419)
T ss_pred CCCEEEEEEccCCCcEEEEEECCCCcE-EEcccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCe-E-eCccC
Confidence 776654 44434 3566778877653 3333222 1233467777666655554444 566667753221 1 11222
Q ss_pred CCCCCeeEEEeCCCCCeEEEEEeCC--------CcEEEEEcCCCccceeecCCCCeEEEEeecC-CCEEE
Q 036314 270 SHNSWISACKWHNKSWFHLISASYD--------GKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVI 330 (347)
Q Consensus 270 ~h~~~v~~v~~s~~~~~~l~s~s~D--------~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~ 330 (347)
+. + ...|+|+|..++.+...+ ..|.+.|+.++.. ..+.... ......|+| |+.|+
T Consensus 320 g~--~--~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~-~~LT~~~-~~~~p~~SPDG~~I~ 383 (419)
T PRK04043 320 GK--N--NSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYI-RRLTANG-VNQFPRFSSDGGSIM 383 (419)
T ss_pred CC--c--CceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCe-EECCCCC-CcCCeEECCCCCEEE
Confidence 22 2 248999998755555443 3678888887753 4443321 222467875 55443
No 309
>KOG2114 consensus Vacuolar assembly/sorting protein PEP5/VPS11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.97 E-value=0.0022 Score=61.42 Aligned_cols=210 Identities=13% Similarity=0.169 Sum_probs=125.6
Q ss_pred EEEEccCCCcEEEEeccccccccCccccceeeeeeccccc-eEEEEEeCCCCEEEEeeCCCc-----EEEEecCCCCCCC
Q 036314 82 TVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKAS-VHSIAAETSGNMVCSGSWDCT-----ISLWRTNDSDAAG 155 (347)
Q Consensus 82 ~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~-V~~v~~s~~~~~l~sgs~Dg~-----I~iwd~~~~~~~~ 155 (347)
.++-|++||.|-+.+-. .+.+.-+.+|... |..+-...+..+|++.+.|.. ++||+++..+...
T Consensus 37 ~vvigt~~G~V~~Ln~s----------~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~ 106 (933)
T KOG2114|consen 37 SVVIGTADGRVVILNSS----------FQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNN 106 (933)
T ss_pred eEEEeeccccEEEeccc----------ceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCCC
Confidence 58899999987776532 2233456666666 443333333368888887765 9999987542111
Q ss_pred ccceeeeccCCCcccccccccc-ccccccC--CccceEEEEeC-CCCeEEEEecCCcEEEEE--CCC--Ccee-eeeeeC
Q 036314 156 NQVSIKKRKGNNQVEEPQLEGE-AISTLVG--HTQCVSSVVWP-QQETIYSASWDHSVRTWD--VEM--GKDL-SDIFCG 226 (347)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--h~~~v~~~~~~-~~~~l~s~s~dg~v~vwd--~~~--~~~~-~~~~~~ 226 (347)
.+ ++.+. .+.+... ...++.+++.+ +-..++.|-.||.|.++. +.. +... ......
T Consensus 107 sP---------------~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~ 171 (933)
T KOG2114|consen 107 SP---------------QCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGK 171 (933)
T ss_pred Cc---------------ceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccCC
Confidence 00 00000 0111111 23456667664 446788888999998873 211 1111 111234
Q ss_pred eeeEEEEeeCCCCc-EEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCC
Q 036314 227 KALNCIDIGGEGSA-LIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTA 305 (347)
Q Consensus 227 ~~~~~~~~~~~~~~-~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~ 305 (347)
.+++.+.+..++.. ++++. -..|.+|.+.. +......+..|+..+.|..+++.... +++|+ +.-+.+||....
T Consensus 172 ~pITgL~~~~d~~s~lFv~T--t~~V~~y~l~g--r~p~~~~ld~~G~~lnCss~~~~t~q-fIca~-~e~l~fY~sd~~ 245 (933)
T KOG2114|consen 172 EPITGLALRSDGKSVLFVAT--TEQVMLYSLSG--RTPSLKVLDNNGISLNCSSFSDGTYQ-FICAG-SEFLYFYDSDGR 245 (933)
T ss_pred CCceeeEEecCCceeEEEEe--cceeEEEEecC--CCcceeeeccCCccceeeecCCCCcc-EEEec-CceEEEEcCCCc
Confidence 57888888766665 23333 36799999873 22234557888888999999877653 55444 346999999877
Q ss_pred ccceeec-CCCCeEEEEe
Q 036314 306 WPLSVID-SHKDKVLCAD 322 (347)
Q Consensus 306 ~~~~~~~-~h~~~v~~~~ 322 (347)
.+..++. ||+-....+.
T Consensus 246 ~~cfaf~~g~kk~~~~~~ 263 (933)
T KOG2114|consen 246 GPCFAFEVGEKKEMLVFS 263 (933)
T ss_pred ceeeeecCCCeEEEEEEe
Confidence 7777887 7765544433
No 310
>KOG0882 consensus Cyclophilin-related peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=97.97 E-value=0.00014 Score=64.34 Aligned_cols=203 Identities=16% Similarity=0.106 Sum_probs=129.5
Q ss_pred ccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeC-
Q 036314 117 GHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP- 195 (347)
Q Consensus 117 ~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~- 195 (347)
-|.+.|+.+. ..-.+++.+++.||.++.|.-.... + -+.+..+..|-..+.+++.+
T Consensus 7 mhrd~i~hv~-~tka~fiiqASlDGh~KFWkKs~is--G--------------------vEfVKhFraHL~~I~sl~~S~ 63 (558)
T KOG0882|consen 7 MHRDVITHVF-PTKAKFIIQASLDGHKKFWKKSRIS--G--------------------VEFVKHFRAHLGVILSLAVSY 63 (558)
T ss_pred cccceeeeEe-eehhheEEeeecchhhhhcCCCCcc--c--------------------eeehhhhHHHHHHHHhhhccc
Confidence 4777777664 3345799999999999999532100 0 01233445566667777655
Q ss_pred CCCeEEEEec-CCcEEEEECCCCceeeeeee---CeeeEEEEeeCCCCcEEEEe-cCCCcEEEEeCCCCCCCCCeEEecC
Q 036314 196 QQETIYSASW-DHSVRTWDVEMGKDLSDIFC---GKALNCIDIGGEGSALIAAG-GSDPILRIWDPRKPGTSAPVFQFSS 270 (347)
Q Consensus 196 ~~~~l~s~s~-dg~v~vwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~la~~-~~d~~i~iwd~~~~~~~~~~~~~~~ 270 (347)
++-.+.|++. |..++++|+++-..+.-+.. +..+.++.-..+...++|.+ -.++.+.++|.+....+ ....-.-
T Consensus 64 dg~L~~Sv~d~Dhs~KvfDvEn~DminmiKL~~lPg~a~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q-~~~fkkl 142 (558)
T KOG0882|consen 64 DGWLFRSVEDPDHSVKVFDVENFDMINMIKLVDLPGFAEWVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQ-DGYFKKL 142 (558)
T ss_pred cceeEeeccCcccceeEEEeeccchhhhcccccCCCceEEecCCCCeeeeEEeecccCCCcEEECCcCCcCc-cceeccc
Confidence 4555677677 99999999987554432221 22233322211112244443 46789999998754422 2334456
Q ss_pred CCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCC-Cccce--------------eecCCCCeEEEEeecC-CCEEEEccC
Q 036314 271 HNSWISACKWHNKSWFHLISASYDGKVMLWDLRT-AWPLS--------------VIDSHKDKVLCADWWR-GDSVISGGV 334 (347)
Q Consensus 271 h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~-~~~~~--------------~~~~h~~~v~~~~~~~-~~~l~s~s~ 334 (347)
|.++|..+.+++-+.. ++|....|.|.-|.... -+.+. .+.-.+....++.|+| |.++++-+.
T Consensus 143 H~sPV~~i~y~qa~Ds-~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~ 221 (558)
T KOG0882|consen 143 HFSPVKKIRYNQAGDS-AVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNP 221 (558)
T ss_pred ccCceEEEEeeccccc-eeeccccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccccCcccccCc
Confidence 9999999999998864 78888889999998873 11110 1111234567889975 778999999
Q ss_pred CceEEEeecc
Q 036314 335 DSKLCVSSGV 344 (347)
Q Consensus 335 D~~v~vw~~~ 344 (347)
|..|++....
T Consensus 222 DrkVR~F~~K 231 (558)
T KOG0882|consen 222 DRKVRGFVFK 231 (558)
T ss_pred ccEEEEEEec
Confidence 9999987643
No 311
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=97.91 E-value=0.0026 Score=57.01 Aligned_cols=143 Identities=13% Similarity=0.000 Sum_probs=92.7
Q ss_pred EEeCCCCeEEEEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCC-cEEEEeCCCCCCCCCeEEecC
Q 036314 192 VVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDP-ILRIWDPRKPGTSAPVFQFSS 270 (347)
Q Consensus 192 ~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~-~i~iwd~~~~~~~~~~~~~~~ 270 (347)
.+..+|++++..|... .-+.+...+-.+ .+.....+....+..+.. -++.|..|| .+-+||.+.. .+..+.+
T Consensus 327 fa~~~Gd~ia~VSRGk-aFi~~~~~~~~i-qv~~~~~VrY~r~~~~~e-~~vigt~dgD~l~iyd~~~~----e~kr~e~ 399 (668)
T COG4946 327 FAVVNGDYIALVSRGK-AFIMRPWDGYSI-QVGKKGGVRYRRIQVDPE-GDVIGTNDGDKLGIYDKDGG----EVKRIEK 399 (668)
T ss_pred hccCCCcEEEEEecCc-EEEECCCCCeeE-EcCCCCceEEEEEccCCc-ceEEeccCCceEEEEecCCc----eEEEeeC
Confidence 3335788888877554 444443333222 222233455555544433 567788888 9999998742 3566777
Q ss_pred CCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeecCCC-EEEEccCC----ceEEEee
Q 036314 271 HNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGD-SVISGGVD----SKLCVSS 342 (347)
Q Consensus 271 h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~D----~~v~vw~ 342 (347)
.-+.|.++..+|+|.. ++.+-....+.+.|++++.+...-+...+.|+..+|+|.. .+|=+=.+ ..|+|++
T Consensus 400 ~lg~I~av~vs~dGK~-~vvaNdr~el~vididngnv~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklyd 475 (668)
T COG4946 400 DLGNIEAVKVSPDGKK-VVVANDRFELWVIDIDNGNVRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYD 475 (668)
T ss_pred CccceEEEEEcCCCcE-EEEEcCceEEEEEEecCCCeeEecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEe
Confidence 8889999999999864 7777777889999999986443334456788999998744 56644333 4455554
No 312
>KOG1008 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=97.90 E-value=5.2e-06 Score=76.20 Aligned_cols=206 Identities=20% Similarity=0.242 Sum_probs=122.2
Q ss_pred eEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCC-CCEEEEe----eCCC
Q 036314 67 VSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETS-GNMVCSG----SWDC 141 (347)
Q Consensus 67 V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~-~~~l~sg----s~Dg 141 (347)
+.++++.... +.-.++.|..+|.|-+-.+....- ......++|..++++++|++- .+.||.| -.|.
T Consensus 59 ~kcva~~y~~--d~cIlavG~atG~I~l~s~r~~hd-------Ss~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds 129 (783)
T KOG1008|consen 59 VKCVASFYGN--DRCILAVGSATGNISLLSVRHPHD-------SSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDS 129 (783)
T ss_pred ceeehhhcCC--chhhhhhccccCceEEeecCCccc-------ccceecccccccccccccccccHHHHHhhhhhhcccC
Confidence 4455544322 223678889999998887643211 112345678899999999774 4566655 2467
Q ss_pred cEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeC-CCCeEEEEecCCcEEEEECCCCcee
Q 036314 142 TISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP-QQETIYSASWDHSVRTWDVEMGKDL 220 (347)
Q Consensus 142 ~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~l~s~s~dg~v~vwd~~~~~~~ 220 (347)
.+.|||+.+.-.. +.+.+.+.+ .++.+ ..+++|- +.+.+++|...+.++++|++.....
T Consensus 130 ~~~Iwdi~s~ltv-------------Pke~~~fs~---~~l~g----qns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~ 189 (783)
T KOG1008|consen 130 SLKIWDINSLLTV-------------PKESPLFSS---STLDG----QNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDS 189 (783)
T ss_pred CccceecccccCC-------------Ccccccccc---ccccC----ccccccccCcchhhcccccchhhhhhhhhhhhh
Confidence 7999998764211 001111111 02222 2356664 5566888888889999999843221
Q ss_pred eeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEe-CCCCCCCCCeEEecCCCC----CeeEEEeCCCCCeEEEEEeCC-
Q 036314 221 SDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWD-PRKPGTSAPVFQFSSHNS----WISACKWHNKSWFHLISASYD- 294 (347)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd-~~~~~~~~~~~~~~~h~~----~v~~v~~s~~~~~~l~s~s~D- 294 (347)
......+.+..+.+.|-....+++. .|+.|.+|| .++-+. ++..+....+ .+..++|.|....+|++.+.|
T Consensus 190 ~~svnTk~vqG~tVdp~~~nY~cs~-~dg~iAiwD~~rnien--pl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS 266 (783)
T KOG1008|consen 190 VSSVNTKYVQGITVDPFSPNYFCSN-SDGDIAIWDTYRNIEN--PLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDS 266 (783)
T ss_pred hhhhhhhhcccceecCCCCCceecc-ccCceeeccchhhhcc--HHHHHhhCCCCcccceeeEEeccCCcchhhhhccCc
Confidence 1111122344455555445566654 499999999 443222 2222221222 478899999877788888865
Q ss_pred CcEEEEEcCC
Q 036314 295 GKVMLWDLRT 304 (347)
Q Consensus 295 ~~i~lwd~~~ 304 (347)
++|+++|+..
T Consensus 267 ~tIrlydi~~ 276 (783)
T KOG1008|consen 267 ITIRLYDICV 276 (783)
T ss_pred ceEEEecccc
Confidence 6899999863
No 313
>KOG1275 consensus PAB-dependent poly(A) ribonuclease, subunit PAN2 [Replication, recombination and repair]
Probab=97.85 E-value=0.00053 Score=65.89 Aligned_cols=141 Identities=16% Similarity=0.224 Sum_probs=98.6
Q ss_pred CCCCeEEEEecCCcEEEEECCCCceeeeeeeCe-eeEEEEeeCCCCcEEEEecC---------CCcEEEEeCCCCCCCCC
Q 036314 195 PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGK-ALNCIDIGGEGSALIAAGGS---------DPILRIWDPRKPGTSAP 264 (347)
Q Consensus 195 ~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~la~~~~---------d~~i~iwd~~~~~~~~~ 264 (347)
.+++.+.+|...|+|.+-|.++.+.++++..+. .+..++. .+++++++|. |..|++||+|......|
T Consensus 185 ~Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siSDfDv---~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~P 261 (1118)
T KOG1275|consen 185 YNNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSISDFDV---QGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSP 261 (1118)
T ss_pred ecCcEEEeecccceEEeecCCcCceeeeeeccccceeeeec---cCCeEEEeecccccccccccchhhhhhhhhhhccCC
Confidence 466889999999999999999999888886543 4555555 2346666654 56789999986544333
Q ss_pred eEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCC-Ccc-ceee--cCCCCeEEEEeec-CCCEEEEccCCceEE
Q 036314 265 VFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRT-AWP-LSVI--DSHKDKVLCADWW-RGDSVISGGVDSKLC 339 (347)
Q Consensus 265 ~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~-~~~-~~~~--~~h~~~v~~~~~~-~~~~l~s~s~D~~v~ 339 (347)
+. + +.+. .-+.|.|.=...++.+|..|...+-|..+ ..+ ...+ ......+.+++++ +|+-||-|..+|.|.
T Consensus 262 I~-~--~~~P-~flrf~Psl~t~~~V~S~sGq~q~vd~~~lsNP~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~ 337 (1118)
T KOG1275|consen 262 IQ-F--PYGP-QFLRFHPSLTTRLAVTSQSGQFQFVDTATLSNPPAGVKMVNPNGSGISAFDISSNGDALAFGDHEGHVN 337 (1118)
T ss_pred cc-c--ccCc-hhhhhcccccceEEEEecccceeeccccccCCCccceeEEccCCCcceeEEecCCCceEEEecccCcEe
Confidence 32 2 2221 23567777666799999999999999332 122 2222 2223458888886 588899999999999
Q ss_pred Eee
Q 036314 340 VSS 342 (347)
Q Consensus 340 vw~ 342 (347)
+|+
T Consensus 338 ~wa 340 (1118)
T KOG1275|consen 338 LWA 340 (1118)
T ss_pred eec
Confidence 998
No 314
>KOG1920 consensus IkappaB kinase complex, IKAP component [Transcription]
Probab=97.82 E-value=0.01 Score=59.28 Aligned_cols=218 Identities=14% Similarity=0.165 Sum_probs=118.9
Q ss_pred CceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEE
Q 036314 65 GAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTIS 144 (347)
Q Consensus 65 ~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~ 144 (347)
+.|.++.|..+.. .++.+..+|.|.+-|.++.. +.....-..+|.+++|+||+++++-.+.++++.
T Consensus 69 ~~i~s~~fl~d~~----~i~v~~~~G~iilvd~et~~----------~eivg~vd~GI~aaswS~Dee~l~liT~~~tll 134 (1265)
T KOG1920|consen 69 DEIVSVQFLADTN----SICVITALGDIILVDPETLE----------LEIVGNVDNGISAASWSPDEELLALITGRQTLL 134 (1265)
T ss_pred cceEEEEEecccc----eEEEEecCCcEEEEcccccc----------eeeeeeccCceEEEeecCCCcEEEEEeCCcEEE
Confidence 5788888887543 46777888899998876542 122233577899999999999999888888886
Q ss_pred EEecCCCCCCCccce----------eeeccCCCccccccccccccc----cccCCc---------cceEEEEeC-CCCeE
Q 036314 145 LWRTNDSDAAGNQVS----------IKKRKGNNQVEEPQLEGEAIS----TLVGHT---------QCVSSVVWP-QQETI 200 (347)
Q Consensus 145 iwd~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~----~~~~h~---------~~v~~~~~~-~~~~l 200 (347)
+-+- +......... +.... .-...++.|...+ ....+. +.=.++.|. +|+++
T Consensus 135 ~mT~-~f~~i~E~~L~~d~~~~sk~v~VGw---GrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~f 210 (1265)
T KOG1920|consen 135 FMTK-DFEPIAEKPLDADDERKSKFVNVGW---GRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYF 210 (1265)
T ss_pred EEec-cccchhccccccccccccccceecc---cccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEE
Confidence 6431 1111000000 00000 0001112111110 000011 111347785 66676
Q ss_pred EEE----ecC-CcEEEEECCCCceeeeeeeC--eeeEEEEeeCCCCcEEEEe---cCCCcEEEEeCCCCCCCCCeEEecC
Q 036314 201 YSA----SWD-HSVRTWDVEMGKDLSDIFCG--KALNCIDIGGEGSALIAAG---GSDPILRIWDPRKPGTSAPVFQFSS 270 (347)
Q Consensus 201 ~s~----s~d-g~v~vwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~la~~---~~d~~i~iwd~~~~~~~~~~~~~~~ 270 (347)
+.. -.+ +.|++||-+ |.. ...... ..-.+++|-| .+.++|+- +.|+.|.+|.........-...+..
T Consensus 211 AVs~~~~~~~~RkirV~drE-g~L-ns~se~~~~l~~~LsWkP-sgs~iA~iq~~~sd~~IvffErNGL~hg~f~l~~p~ 287 (1265)
T KOG1920|consen 211 AVSFVESETGTRKIRVYDRE-GAL-NSTSEPVEGLQHSLSWKP-SGSLIAAIQCKTSDSDIVFFERNGLRHGEFVLPFPL 287 (1265)
T ss_pred EEEEEeccCCceeEEEeccc-chh-hcccCcccccccceeecC-CCCeEeeeeecCCCCcEEEEecCCccccccccCCcc
Confidence 651 233 789999976 432 222111 1234677766 45566653 4567899997542211111112223
Q ss_pred CCCCeeEEEeCCCCCeEEEE---EeCCCcEEEEEcCC
Q 036314 271 HNSWISACKWHNKSWFHLIS---ASYDGKVMLWDLRT 304 (347)
Q Consensus 271 h~~~v~~v~~s~~~~~~l~s---~s~D~~i~lwd~~~ 304 (347)
....+..++|+.++. .||. ......|++|=..+
T Consensus 288 de~~ve~L~Wns~sd-iLAv~~~~~e~~~v~lwt~~N 323 (1265)
T KOG1920|consen 288 DEKEVEELAWNSNSD-ILAVVTSNLENSLVQLWTTGN 323 (1265)
T ss_pred cccchheeeecCCCC-ceeeeecccccceEEEEEecC
Confidence 333488999998875 4665 44555699996653
No 315
>KOG1832 consensus HIV-1 Vpr-binding protein [Cell cycle control, cell division, chromosome partitioning]
Probab=97.80 E-value=2.6e-05 Score=74.28 Aligned_cols=184 Identities=18% Similarity=0.269 Sum_probs=112.7
Q ss_pred ccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCcc
Q 036314 108 KIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQ 187 (347)
Q Consensus 108 ~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 187 (347)
..+..++|+.|+..-+|++|+-+.+.|+.|+..|.|++|++.++.. .....+|..
T Consensus 1090 RFr~w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~-------------------------e~s~ncH~S 1144 (1516)
T KOG1832|consen 1090 RFRSWRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSM-------------------------EESVNCHQS 1144 (1516)
T ss_pred hcccchhhhccccceeeEEeecCCceEEeeeccceEEEEEccCccc-------------------------ccccccccc
Confidence 3466677889999999999999999999999999999999887532 223456777
Q ss_pred ceEEEEeC-CCCe-EEEEecCC-cEEEEECCC-CceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCC
Q 036314 188 CVSSVVWP-QQET-IYSASWDH-SVRTWDVEM-GKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSA 263 (347)
Q Consensus 188 ~v~~~~~~-~~~~-l~s~s~dg-~v~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~ 263 (347)
+|.-+.-+ ++.+ |.++++.. -..+|++.. +...+.+. .-.++.|+.. ...-+.|.......+||+.....
T Consensus 1145 avT~vePs~dgs~~Ltsss~S~PlsaLW~~~s~~~~~Hsf~---ed~~vkFsn~-~q~r~~gt~~d~a~~YDvqT~~~-- 1218 (1516)
T KOG1832|consen 1145 AVTLVEPSVDGSTQLTSSSSSSPLSALWDASSTGGPRHSFD---EDKAVKFSNS-LQFRALGTEADDALLYDVQTCSP-- 1218 (1516)
T ss_pred ccccccccCCcceeeeeccccCchHHHhccccccCcccccc---ccceeehhhh-HHHHHhcccccceEEEecccCcH--
Confidence 77766632 4544 45555555 567999864 23333332 2234555322 22224455667889999874321
Q ss_pred CeEE-ecCC--CCC-eeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeecC-CCEEE
Q 036314 264 PVFQ-FSSH--NSW-ISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVI 330 (347)
Q Consensus 264 ~~~~-~~~h--~~~-v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~ 330 (347)
..+ +.+. .++ -+...|+|++.. ++ .|| -+||+|..+.++.|...+.-+ .-.|+| |..++
T Consensus 1219 -l~tylt~~~~~~y~~n~a~FsP~D~L-Il---ndG--vLWDvR~~~aIh~FD~ft~~~-~G~FHP~g~eVI 1282 (1516)
T KOG1832|consen 1219 -LQTYLTDTVTSSYSNNLAHFSPCDTL-IL---NDG--VLWDVRIPEAIHRFDQFTDYG-GGGFHPSGNEVI 1282 (1516)
T ss_pred -HHHhcCcchhhhhhccccccCCCcce-Ee---eCc--eeeeeccHHHHhhhhhheecc-cccccCCCceEE
Confidence 222 2111 111 245679998753 33 344 279999887777765444222 235654 44444
No 316
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=97.77 E-value=8.2e-05 Score=42.22 Aligned_cols=37 Identities=41% Similarity=0.618 Sum_probs=32.7
Q ss_pred eeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEe
Q 036314 111 SFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWR 147 (347)
Q Consensus 111 ~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd 147 (347)
+...+..|...|.++.|++++.++++++.|+.+++|+
T Consensus 4 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 4 LLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 3455678999999999999999999999999999995
No 317
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=97.75 E-value=0.021 Score=48.63 Aligned_cols=213 Identities=11% Similarity=0.164 Sum_probs=118.8
Q ss_pred CCCEEEEEecCCeEEEEcCCCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceee
Q 036314 34 NPGFILTGCYDNLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFK 113 (347)
Q Consensus 34 ~~~~l~sg~~d~~i~iw~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~ 113 (347)
++.++++--..+.|.-|+..+.....+.... ...+.+...++ . |+.+..++ +.++|+.+++. +.+.
T Consensus 11 ~g~l~~~D~~~~~i~~~~~~~~~~~~~~~~~--~~G~~~~~~~g---~-l~v~~~~~-~~~~d~~~g~~-------~~~~ 76 (246)
T PF08450_consen 11 DGRLYWVDIPGGRIYRVDPDTGEVEVIDLPG--PNGMAFDRPDG---R-LYVADSGG-IAVVDPDTGKV-------TVLA 76 (246)
T ss_dssp TTEEEEEETTTTEEEEEETTTTEEEEEESSS--EEEEEEECTTS---E-EEEEETTC-EEEEETTTTEE-------EEEE
T ss_pred CCEEEEEEcCCCEEEEEECCCCeEEEEecCC--CceEEEEccCC---E-EEEEEcCc-eEEEecCCCcE-------EEEe
Confidence 4456667667889999998765554444333 56777763332 2 44445544 56668876542 2222
Q ss_pred eee--c-cccceEEEEEeCCCCEEEEeeCC--------CcEEEEecCCCCCCCccceeeeccCCCccccccccccccccc
Q 036314 114 ILR--G-HKASVHSIAAETSGNMVCSGSWD--------CTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTL 182 (347)
Q Consensus 114 ~~~--~-h~~~V~~v~~s~~~~~l~sgs~D--------g~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (347)
... . .....+.+++.++|++.++.... |.|..++.. .. ...+
T Consensus 77 ~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~--------------------------~~~~ 129 (246)
T PF08450_consen 77 DLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GK--------------------------VTVV 129 (246)
T ss_dssp EEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SE--------------------------EEEE
T ss_pred eccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-Ce--------------------------EEEE
Confidence 221 1 34557889999999988876544 234444332 10 0011
Q ss_pred cCCccceEEEEe-CCCCeEE-EEecCCcEEEEECCCCce-ee---ee---eeCe-eeEEEEeeCCCCcEEEEecCCCcEE
Q 036314 183 VGHTQCVSSVVW-PQQETIY-SASWDHSVRTWDVEMGKD-LS---DI---FCGK-ALNCIDIGGEGSALIAAGGSDPILR 252 (347)
Q Consensus 183 ~~h~~~v~~~~~-~~~~~l~-s~s~dg~v~vwd~~~~~~-~~---~~---~~~~-~~~~~~~~~~~~~~la~~~~d~~i~ 252 (347)
...-...+.++| ++++.|+ +-+..+.|..+++..... +. .+ .... ....+++..+ +++.++....+.|.
T Consensus 130 ~~~~~~pNGi~~s~dg~~lyv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~-G~l~va~~~~~~I~ 208 (246)
T PF08450_consen 130 ADGLGFPNGIAFSPDGKTLYVADSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSD-GNLWVADWGGGRIV 208 (246)
T ss_dssp EEEESSEEEEEEETTSSEEEEEETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTT-S-EEEEEETTTEEE
T ss_pred ecCcccccceEECCcchheeecccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCC-CCEEEEEcCCCEEE
Confidence 111233567887 5666665 567778888888853221 21 11 1111 2556777664 45666666788999
Q ss_pred EEeCCCCCCCCCeEEecCCCCCeeEEEeC-CCCCeEEEEEe
Q 036314 253 IWDPRKPGTSAPVFQFSSHNSWISACKWH-NKSWFHLISAS 292 (347)
Q Consensus 253 iwd~~~~~~~~~~~~~~~h~~~v~~v~~s-~~~~~~l~s~s 292 (347)
++|.+ +. .+..+.-....+++++|. ++...+++|.+
T Consensus 209 ~~~p~--G~--~~~~i~~p~~~~t~~~fgg~~~~~L~vTta 245 (246)
T PF08450_consen 209 VFDPD--GK--LLREIELPVPRPTNCAFGGPDGKTLYVTTA 245 (246)
T ss_dssp EEETT--SC--EEEEEE-SSSSEEEEEEESTTSSEEEEEEB
T ss_pred EECCC--cc--EEEEEcCCCCCEEEEEEECCCCCEEEEEeC
Confidence 99976 22 233444344588999994 56556566543
No 318
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=97.70 E-value=0.014 Score=49.25 Aligned_cols=195 Identities=15% Similarity=0.117 Sum_probs=100.1
Q ss_pred CCCEEEEEecCCeEEEEcC-CCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCcccccee
Q 036314 34 NPGFILTGCYDNLGRVWKA-GGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSF 112 (347)
Q Consensus 34 ~~~~l~sg~~d~~i~iw~~-~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~ 112 (347)
+++.+++++.++.+..||. .|+.+..+... +.+....... ++ .++.++.|+.+..+|..+++.+-.. ..
T Consensus 35 ~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~~-~~~~~~~~~~-~~----~v~v~~~~~~l~~~d~~tG~~~W~~----~~ 104 (238)
T PF13360_consen 35 DGGRVYVASGDGNLYALDAKTGKVLWRFDLP-GPISGAPVVD-GG----RVYVGTSDGSLYALDAKTGKVLWSI----YL 104 (238)
T ss_dssp ETTEEEEEETTSEEEEEETTTSEEEEEEECS-SCGGSGEEEE-TT----EEEEEETTSEEEEEETTTSCEEEEE----EE
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEeecc-ccccceeeec-cc----ccccccceeeeEecccCCcceeeee----cc
Confidence 5667777789999999997 68776655532 2211111122 22 3556668889999998877642110 00
Q ss_pred eeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEE
Q 036314 113 KILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSV 192 (347)
Q Consensus 113 ~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 192 (347)
....... .........++..++.+..++.|..+|+.++....... ...... ...+.. .......+
T Consensus 105 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~------~~~~~~-----~~~~~~---~~~~~~~~ 169 (238)
T PF13360_consen 105 TSSPPAG-VRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYP------VGEPRG-----SSPISS---FSDINGSP 169 (238)
T ss_dssp -SSCTCS-TB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEE------SSTT-S-----S--EEE---ETTEEEEE
T ss_pred ccccccc-cccccCceEecCEEEEEeccCcEEEEecCCCcEEEEee------cCCCCC-----Ccceee---ecccccce
Confidence 0000001 11112222237788888889999999988763211100 000000 000000 00011222
Q ss_pred EeCCCCeEEEEecCCc-EEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCC
Q 036314 193 VWPQQETIYSASWDHS-VRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRK 258 (347)
Q Consensus 193 ~~~~~~~l~s~s~dg~-v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~ 258 (347)
.+.++ .++.++.++. +.+ |+++++.+-... ....... ....+. .++.++.++.+..||++.
T Consensus 170 ~~~~~-~v~~~~~~g~~~~~-d~~tg~~~w~~~-~~~~~~~-~~~~~~-~l~~~~~~~~l~~~d~~t 231 (238)
T PF13360_consen 170 VISDG-RVYVSSGDGRVVAV-DLATGEKLWSKP-ISGIYSL-PSVDGG-TLYVTSSDGRLYALDLKT 231 (238)
T ss_dssp ECCTT-EEEEECCTSSEEEE-ETTTTEEEEEEC-SS-ECEC-EECCCT-EEEEEETTTEEEEEETTT
T ss_pred EEECC-EEEEEcCCCeEEEE-ECCCCCEEEEec-CCCccCC-ceeeCC-EEEEEeCCCEEEEEECCC
Confidence 33344 7777777775 555 999987442211 1122221 123444 445555899999999875
No 319
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=97.61 E-value=0.0028 Score=58.41 Aligned_cols=72 Identities=15% Similarity=0.220 Sum_probs=56.9
Q ss_pred CCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeecC-CCEEEEccCCceEEEeecc
Q 036314 270 SHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 270 ~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~D~~v~vw~~~ 344 (347)
.....|.+++++|+.. .|+.|+.||+|.+||...+.. .+..+.-.+..++|+| |..++.|+.-|.+.+||.-
T Consensus 257 pL~s~v~~ca~sp~E~-kLvlGC~DgSiiLyD~~~~~t--~~~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~A 329 (545)
T PF11768_consen 257 PLPSQVICCARSPSED-KLVLGCEDGSIILYDTTRGVT--LLAKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMA 329 (545)
T ss_pred ecCCcceEEecCcccc-eEEEEecCCeEEEEEcCCCee--eeeeecccceEEEEcCCCcEEEEEcCCceEEEEEee
Confidence 5667899999999986 599999999999999987632 2323333457899986 6678999999999999863
No 320
>KOG1008 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=97.53 E-value=0.00012 Score=67.60 Aligned_cols=202 Identities=17% Similarity=0.212 Sum_probs=120.9
Q ss_pred cCCceeeccCC--CC-CEEEEEecCCeEEEEcCCCe--E-EEEeeccCCceEEEEEeecCCCceEEEEEc----cCCCcE
Q 036314 23 HDDWVSAVDGS--NP-GFILTGCYDNLGRVWKAGGV--C-THILEGHCGAVSSVNIIKSDGLKYVTVATA----SKDQTL 92 (347)
Q Consensus 23 h~~~v~~~~~~--~~-~~l~sg~~d~~i~iw~~~~~--~-~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~----s~Dg~v 92 (347)
....+.+++.. .+ -+++.|..+|.|-+-..... . -....+|...-++++|.+-+ ...||.| -.|..+
T Consensus 55 dtqy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLD---tn~LAagldkhrnds~~ 131 (783)
T KOG1008|consen 55 DTQYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELD---TNHLAAGLDKHRNDSSL 131 (783)
T ss_pred cCCCceeehhhcCCchhhhhhccccCceEEeecCCcccccceeccccccccccccccccc---HHHHHhhhhhhcccCCc
Confidence 45678888843 33 47889999999888754321 1 12355677777888887742 2245544 235679
Q ss_pred EEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccc
Q 036314 93 RLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEP 172 (347)
Q Consensus 93 ~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (347)
+|||+.+.-- .|+....+. .+-.....++++-.+.+++++|..-..++++|++..-.
T Consensus 132 ~Iwdi~s~lt--vPke~~~fs--~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~------------------- 188 (783)
T KOG1008|consen 132 KIWDINSLLT--VPKESPLFS--SSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLD------------------- 188 (783)
T ss_pred cceecccccC--CCccccccc--cccccCccccccccCcchhhcccccchhhhhhhhhhhh-------------------
Confidence 9999976511 111111111 12344456888888999999999999999998763210
Q ss_pred cccccccccccCCccceEEEEe-C-CCCeEEEEecCCcEEEEEC-CCC-ceeeeeee-----CeeeEEEEeeCCCCcEEE
Q 036314 173 QLEGEAISTLVGHTQCVSSVVW-P-QQETIYSASWDHSVRTWDV-EMG-KDLSDIFC-----GKALNCIDIGGEGSALIA 243 (347)
Q Consensus 173 ~~~~~~~~~~~~h~~~v~~~~~-~-~~~~l~s~s~dg~v~vwd~-~~~-~~~~~~~~-----~~~~~~~~~~~~~~~~la 243 (347)
+...-.++.+..+.. | ..+++++ ..|+.+.+||. +.- .++..+.. .+.+..+++.|-...+++
T Consensus 189 -------~~~svnTk~vqG~tVdp~~~nY~cs-~~dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla 260 (783)
T KOG1008|consen 189 -------SVSSVNTKYVQGITVDPFSPNYFCS-NSDGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLA 260 (783)
T ss_pred -------hhhhhhhhhcccceecCCCCCceec-cccCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhh
Confidence 000112233444443 3 3456655 45999999994 222 12222221 124677888876656677
Q ss_pred EecCC-CcEEEEeCCC
Q 036314 244 AGGSD-PILRIWDPRK 258 (347)
Q Consensus 244 ~~~~d-~~i~iwd~~~ 258 (347)
+.+.| ++|+++|+..
T Consensus 261 ~l~RdS~tIrlydi~~ 276 (783)
T KOG1008|consen 261 VLSRDSITIRLYDICV 276 (783)
T ss_pred hhccCcceEEEecccc
Confidence 76654 7999999864
No 321
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=97.45 E-value=0.035 Score=50.58 Aligned_cols=225 Identities=11% Similarity=0.036 Sum_probs=114.3
Q ss_pred ceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCC-cc--ce--ee--ec--c-CCCcc------ccccc-cc-cccccc
Q 036314 121 SVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAG-NQ--VS--IK--KR--K-GNNQV------EEPQL-EG-EAISTL 182 (347)
Q Consensus 121 ~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~-~~--~~--~~--~~--~-~~~~~------~~~~~-~~-~~~~~~ 182 (347)
.|+.+.|.++..-|+.|...|.|-||........+ .. .. .. +. . ....+ ..+.+ ++ .+...+
T Consensus 3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~ 82 (395)
T PF08596_consen 3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLL 82 (395)
T ss_dssp -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE
T ss_pred eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhhe
Confidence 47889999998889999999999998754322111 00 00 00 00 0 00000 00000 00 112223
Q ss_pred cCCccceEEEEeCCCCeEEEEecCCcEEEEECCCCceeeeeeeC---------eeeEEEEee----CCCC---cEEEEec
Q 036314 183 VGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCG---------KALNCIDIG----GEGS---ALIAAGG 246 (347)
Q Consensus 183 ~~h~~~v~~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~---------~~~~~~~~~----~~~~---~~la~~~ 246 (347)
....++|.+++.++=..++.|+.+|.+.|.|+|.+..+...... ..+.++.|. .++. -++.+|.
T Consensus 83 ~~~~g~vtal~~S~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vGT 162 (395)
T PF08596_consen 83 DAKQGPVTALKNSDIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVGT 162 (395)
T ss_dssp ---S-SEEEEEE-BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEEE
T ss_pred eccCCcEeEEecCCCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEEEe
Confidence 33467899999888889999999999999999988776553211 134455443 1222 3567888
Q ss_pred CCCcEEEEeCCCCCCCCCeEE----ecCCCCCeeEEE-eCCCC--------------------CeEEEEEeCCCcEEEEE
Q 036314 247 SDPILRIWDPRKPGTSAPVFQ----FSSHNSWISACK-WHNKS--------------------WFHLISASYDGKVMLWD 301 (347)
Q Consensus 247 ~d~~i~iwd~~~~~~~~~~~~----~~~h~~~v~~v~-~s~~~--------------------~~~l~s~s~D~~i~lwd 301 (347)
..|.+.+|.+-......-... ...+.+.|..+. ++.+. +.+++ ...+..||++.
T Consensus 163 n~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vV-vvSe~~irv~~ 241 (395)
T PF08596_consen 163 NSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGYVV-VVSESDIRVFK 241 (395)
T ss_dssp TTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEEE-EE-SSEEEEE-
T ss_pred CCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcEEE-EEcccceEEEe
Confidence 899999997642111110111 113445554443 32221 12333 34467899999
Q ss_pred cCCCccceeecCCCCeEEEEeec------CCCEEEEccCCceEEEeecccC
Q 036314 302 LRTAWPLSVIDSHKDKVLCADWW------RGDSVISGGVDSKLCVSSGVSI 346 (347)
Q Consensus 302 ~~~~~~~~~~~~h~~~v~~~~~~------~~~~l~s~s~D~~v~vw~~~~~ 346 (347)
.-+.+..+......-.+..+.+- .+..|+.--.||.|++++.|+.
T Consensus 242 ~~~~k~~~K~~~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~L 292 (395)
T PF08596_consen 242 PPKSKGAHKSFDDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSL 292 (395)
T ss_dssp TT---EEEEE-SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT-
T ss_pred CCCCcccceeeccccccceEEEEeecccCCceEEEEEECCCcEEEEECCCc
Confidence 87765544333222233334442 2445888889999999999864
No 322
>KOG1645 consensus RING-finger-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=97.39 E-value=0.00053 Score=59.99 Aligned_cols=84 Identities=15% Similarity=0.179 Sum_probs=68.9
Q ss_pred cccccCCccceEEEEeCCC--CeEEEEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeC
Q 036314 179 ISTLVGHTQCVSSVVWPQQ--ETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDP 256 (347)
Q Consensus 179 ~~~~~~h~~~v~~~~~~~~--~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~ 256 (347)
...+.+|...|.+++|++. ..+..++.+++|+|.|+++...+......+.+...+|+-++.++|.+|-..|.|.+||+
T Consensus 186 sq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~~~~wSC~wDlde~h~IYaGl~nG~VlvyD~ 265 (463)
T KOG1645|consen 186 SQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAYNQIWSCCWDLDERHVIYAGLQNGMVLVYDM 265 (463)
T ss_pred hhcccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheeccCCceeeeeccCCcceeEEeccCceEEEEEc
Confidence 3456678889999998643 35788999999999999998777666667788888888888889999999999999999
Q ss_pred CCCCCC
Q 036314 257 RKPGTS 262 (347)
Q Consensus 257 ~~~~~~ 262 (347)
+.++.+
T Consensus 266 R~~~~~ 271 (463)
T KOG1645|consen 266 RQPEGP 271 (463)
T ss_pred cCCCch
Confidence 976543
No 323
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=97.38 E-value=0.00082 Score=61.81 Aligned_cols=74 Identities=18% Similarity=0.230 Sum_probs=56.8
Q ss_pred ccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-C
Q 036314 117 GHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-P 195 (347)
Q Consensus 117 ~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~ 195 (347)
.....|.+++++|+.+.++.|+.||+|.+||...+.. .+....-....++| |
T Consensus 257 pL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t---------------------------~~~ka~~~P~~iaWHp 309 (545)
T PF11768_consen 257 PLPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVT---------------------------LLAKAEFIPTLIAWHP 309 (545)
T ss_pred ecCCcceEEecCcccceEEEEecCCeEEEEEcCCCee---------------------------eeeeecccceEEEEcC
Confidence 4678899999999999999999999999999764311 11111223456778 6
Q ss_pred CCCeEEEEecCCcEEEEECCCC
Q 036314 196 QQETIYSASWDHSVRTWDVEMG 217 (347)
Q Consensus 196 ~~~~l~s~s~dg~v~vwd~~~~ 217 (347)
+|..++.|+..|.+.+||+.-+
T Consensus 310 ~gai~~V~s~qGelQ~FD~ALs 331 (545)
T PF11768_consen 310 DGAIFVVGSEQGELQCFDMALS 331 (545)
T ss_pred CCcEEEEEcCCceEEEEEeecC
Confidence 7778899999999999998754
No 324
>KOG3617 consensus WD40 and TPR repeat-containing protein [General function prediction only]
Probab=97.34 E-value=0.0089 Score=57.51 Aligned_cols=119 Identities=13% Similarity=0.164 Sum_probs=80.3
Q ss_pred CCcCCCCCcCCceeeccCC-CC-CEEEEEec----CCeEEEEcCCCeEEE--EeeccCCceEEEEEeecCCCceEEEEEc
Q 036314 15 QKEEEPSLHDDWVSAVDGS-NP-GFILTGCY----DNLGRVWKAGGVCTH--ILEGHCGAVSSVNIIKSDGLKYVTVATA 86 (347)
Q Consensus 15 ~~~~~~~~h~~~v~~~~~~-~~-~~l~sg~~----d~~i~iw~~~~~~~~--~l~~h~~~V~~v~~~~~~~~~~~~l~s~ 86 (347)
+..++.-...+.+..+..- +. -++|.++. .|.|.|+--.|...+ +.+-| +.++.|+|. ...|+.|
T Consensus 5 fDtkIE~~Dsdavsti~SWHPsePlfAVA~fS~er~GSVtIfadtGEPqr~Vt~P~h---atSLCWHpe----~~vLa~g 77 (1416)
T KOG3617|consen 5 FDTKIEFLDSDAVSTISSWHPSEPLFAVASFSPERGGSVTIFADTGEPQRDVTYPVH---ATSLCWHPE----EFVLAQG 77 (1416)
T ss_pred ecceeecccccccccccccCCCCceeEEEEecCCCCceEEEEecCCCCCccccccee---hhhhccChH----HHHHhhc
Confidence 3344433445556555522 22 25665553 467888865554221 12223 557899983 3468899
Q ss_pred cCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecC
Q 036314 87 SKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTN 149 (347)
Q Consensus 87 s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~ 149 (347)
-+-|.+.+|.....+. -.....|..+|..+.||++|..++|+..-|.+.+|+..
T Consensus 78 we~g~~~v~~~~~~e~---------htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 78 WEMGVSDVQKTNTTET---------HTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred cccceeEEEecCCcee---------eeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence 9999999998765431 12234699999999999999999999999999999875
No 325
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=97.33 E-value=0.13 Score=47.29 Aligned_cols=258 Identities=13% Similarity=0.053 Sum_probs=125.7
Q ss_pred CCEEEEEecCCeEEEEcC-CCeEEEEeeccC--Cc--------eE-EEEEeecCCCceEEEEEccCCCcEEEEecccccc
Q 036314 35 PGFILTGCYDNLGRVWKA-GGVCTHILEGHC--GA--------VS-SVNIIKSDGLKYVTVATASKDQTLRLWKFDAEEL 102 (347)
Q Consensus 35 ~~~l~sg~~d~~i~iw~~-~~~~~~~l~~h~--~~--------V~-~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~ 102 (347)
++.+..++.++.+.-+|. .|+.+....-.. +. +. .+.+. + ..++.++.++.+..+|.++++.
T Consensus 69 ~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v~--~----~~v~v~~~~g~l~ald~~tG~~ 142 (394)
T PRK11138 69 YNKVYAADRAGLVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVTVA--G----GKVYIGSEKGQVYALNAEDGEV 142 (394)
T ss_pred CCEEEEECCCCeEEEEECCCCcEeeEEcCCCcccccccccccccccccEEE--C----CEEEEEcCCCEEEEEECCCCCC
Confidence 567777778888888886 466554432111 10 00 11111 1 2466778899999999988764
Q ss_pred ccCccccceeeeeec--cccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccc
Q 036314 103 VNHPKKIRSFKILRG--HKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAIS 180 (347)
Q Consensus 103 ~~~~~~~~~~~~~~~--h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (347)
.=. . .+.+ ...++ .. +..++.+..++.+.-+|..+++...... .. ....
T Consensus 143 ~W~-----~--~~~~~~~ssP~----v~--~~~v~v~~~~g~l~ald~~tG~~~W~~~------~~----------~~~~ 193 (394)
T PRK11138 143 AWQ-----T--KVAGEALSRPV----VS--DGLVLVHTSNGMLQALNESDGAVKWTVN------LD----------VPSL 193 (394)
T ss_pred ccc-----c--cCCCceecCCE----EE--CCEEEEECCCCEEEEEEccCCCEeeeec------CC----------CCcc
Confidence 311 0 0111 11221 11 3455667778888888887764321110 00 0000
Q ss_pred cccCCccceEEEEeCCCCeEEEEecCCcEEEEECCCCceeeeeeeCee--------eEEEEeeC--CCCcEEEEecCCCc
Q 036314 181 TLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKA--------LNCIDIGG--EGSALIAAGGSDPI 250 (347)
Q Consensus 181 ~~~~h~~~v~~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~--------~~~~~~~~--~~~~~la~~~~d~~ 250 (347)
...+...++. .++.++.++.++.+...|.++++.+-......+ ...+...| .++ .+..++.++.
T Consensus 194 ~~~~~~sP~v-----~~~~v~~~~~~g~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~-~vy~~~~~g~ 267 (394)
T PRK11138 194 TLRGESAPAT-----AFGGAIVGGDNGRVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGG-VVYALAYNGN 267 (394)
T ss_pred cccCCCCCEE-----ECCEEEEEcCCCEEEEEEccCChhhheeccccCCCccchhcccccCCCcEEECC-EEEEEEcCCe
Confidence 0011111111 134566677788888888888765422211100 00000001 123 3445667889
Q ss_pred EEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCe-EEEEeecCCCEE
Q 036314 251 LRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDK-VLCADWWRGDSV 329 (347)
Q Consensus 251 i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~-v~~~~~~~~~~l 329 (347)
+.-+|+...+. +... .......+.. .+. .|..++.|+.+..+|.++++.+=....-.+. ..+.... +.+|
T Consensus 268 l~ald~~tG~~---~W~~--~~~~~~~~~~--~~~-~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~sp~v~-~g~l 338 (394)
T PRK11138 268 LVALDLRSGQI---VWKR--EYGSVNDFAV--DGG-RIYLVDQNDRVYALDTRGGVELWSQSDLLHRLLTAPVLY-NGYL 338 (394)
T ss_pred EEEEECCCCCE---EEee--cCCCccCcEE--ECC-EEEEEcCCCeEEEEECCCCcEEEcccccCCCcccCCEEE-CCEE
Confidence 99999875321 1111 1111112222 222 3667788999999999887643211100011 1111111 4455
Q ss_pred EEccCCceEEEee
Q 036314 330 ISGGVDSKLCVSS 342 (347)
Q Consensus 330 ~s~s~D~~v~vw~ 342 (347)
..++.||.|.+.+
T Consensus 339 ~v~~~~G~l~~ld 351 (394)
T PRK11138 339 VVGDSEGYLHWIN 351 (394)
T ss_pred EEEeCCCEEEEEE
Confidence 5666677666544
No 326
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=97.31 E-value=0.00056 Score=38.53 Aligned_cols=37 Identities=16% Similarity=0.171 Sum_probs=31.0
Q ss_pred ccceeecCCCCeEEEEeecC-CCEEEEccCCceEEEee
Q 036314 306 WPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKLCVSS 342 (347)
Q Consensus 306 ~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~D~~v~vw~ 342 (347)
+++..+..|.+.|.++.|.+ +..+++++.|+.+++|+
T Consensus 3 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 3 ELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 34566778889999999975 67899999999999995
No 327
>KOG2314 consensus Translation initiation factor 3, subunit b (eIF-3b) [Translation, ribosomal structure and biogenesis]
Probab=97.26 E-value=0.092 Score=48.41 Aligned_cols=91 Identities=15% Similarity=0.149 Sum_probs=53.0
Q ss_pred CcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeC--CCcEEEEEcCC-C---ccceeecCCCCeEEEEe
Q 036314 249 PILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASY--DGKVMLWDLRT-A---WPLSVIDSHKDKVLCAD 322 (347)
Q Consensus 249 ~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~--D~~i~lwd~~~-~---~~~~~~~~h~~~v~~~~ 322 (347)
..+.|+.++... .++..+ .-...|-..+|-|.|..+.+-.+. -.++.+|.+++ + ..+..+.. -....+-
T Consensus 425 ~n~eIfrireKd--Ipve~v-elke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk~~dk--~~~N~vf 499 (698)
T KOG2314|consen 425 SNLEIFRIREKD--IPVEVV-ELKESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKKPSLVKELDK--KFANTVF 499 (698)
T ss_pred eeEEEEEeeccC--CCceee-ecchheeeeeeccCCCeEEEEEccccccceeEEEeecCCCchhhhhhhcc--cccceEE
Confidence 456677776533 233333 234568889999998764332222 25788898874 2 22333332 3456688
Q ss_pred ecC-CCEEEEc---cCCceEEEeecc
Q 036314 323 WWR-GDSVISG---GVDSKLCVSSGV 344 (347)
Q Consensus 323 ~~~-~~~l~s~---s~D~~v~vw~~~ 344 (347)
|+| |+.++.+ |..|.+.+++.-
T Consensus 500 wsPkG~fvvva~l~s~~g~l~F~D~~ 525 (698)
T KOG2314|consen 500 WSPKGRFVVVAALVSRRGDLEFYDTD 525 (698)
T ss_pred EcCCCcEEEEEEecccccceEEEecc
Confidence 887 6665544 346777777653
No 328
>KOG3621 consensus WD40 repeat-containing protein [General function prediction only]
Probab=97.25 E-value=0.036 Score=52.39 Aligned_cols=122 Identities=15% Similarity=0.231 Sum_probs=81.6
Q ss_pred CCCcCCce--eeccCCCCCEEEEEecCCeEEEEcCCCeEEEEee--ccCCceEEEEEeecCCCceEEEEEccCCCcEEEE
Q 036314 20 PSLHDDWV--SAVDGSNPGFILTGCYDNLGRVWKAGGVCTHILE--GHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLW 95 (347)
Q Consensus 20 ~~~h~~~v--~~~~~~~~~~l~sg~~d~~i~iw~~~~~~~~~l~--~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~w 95 (347)
+..|..-| ++++ +.+.+|+-|+.-|.+++++..+.....++ +-.+.+....+++.. .++|.|+..|.|-++
T Consensus 29 ~~~~~~~v~lTc~d-st~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e----~lvAagt~~g~V~v~ 103 (726)
T KOG3621|consen 29 PGFFPARVKLTCVD-ATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVE----YLVAAGTASGRVSVF 103 (726)
T ss_pred cccCcceEEEEEee-cCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchh----HhhhhhcCCceEEee
Confidence 33344433 4444 35679999999999999997554333333 344444455555533 368889999999999
Q ss_pred eccccccccCccccceeeee-eccccceEEEEEeCCCCEEEEeeCCCcEEEEecCC
Q 036314 96 KFDAEELVNHPKKIRSFKIL-RGHKASVHSIAAETSGNMVCSGSWDCTISLWRTND 150 (347)
Q Consensus 96 d~~~~~~~~~~~~~~~~~~~-~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~ 150 (347)
-++.... ........+ ..|...|+++.|++++..+++|..-|+|..-.+..
T Consensus 104 ql~~~~p----~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s 155 (726)
T KOG3621|consen 104 QLNKELP----RDLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDS 155 (726)
T ss_pred hhhccCC----CcceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEech
Confidence 8876321 111111111 23788999999999999999999999998876654
No 329
>KOG1920 consensus IkappaB kinase complex, IKAP component [Transcription]
Probab=97.21 E-value=0.14 Score=51.61 Aligned_cols=243 Identities=13% Similarity=0.116 Sum_probs=125.2
Q ss_pred CceeeccCC-CCCEEEEEecCCeEEEEcCCCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEec----cc
Q 036314 25 DWVSAVDGS-NPGFILTGCYDNLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKF----DA 99 (347)
Q Consensus 25 ~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~----~~ 99 (347)
+.|.++.|- ++..++.+..+|.|.+=|+..........-.+.|.++.|+|+. ..++-.+.++++-+=+. -.
T Consensus 69 ~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~eivg~vd~GI~aaswS~De----e~l~liT~~~tll~mT~~f~~i~ 144 (1265)
T KOG1920|consen 69 DEIVSVQFLADTNSICVITALGDIILVDPETLELEIVGNVDNGISAASWSPDE----ELLALITGRQTLLFMTKDFEPIA 144 (1265)
T ss_pred cceEEEEEecccceEEEEecCCcEEEEcccccceeeeeeccCceEEEeecCCC----cEEEEEeCCcEEEEEeccccchh
Confidence 678888876 5566666667787777776544433444445679999999954 35666666666654332 11
Q ss_pred cccccC--ccc--------cceeeeeecc---------------------ccceEEEEEeCCCCEEEEe-----eCCCcE
Q 036314 100 EELVNH--PKK--------IRSFKILRGH---------------------KASVHSIAAETSGNMVCSG-----SWDCTI 143 (347)
Q Consensus 100 ~~~~~~--~~~--------~~~~~~~~~h---------------------~~~V~~v~~s~~~~~l~sg-----s~Dg~I 143 (347)
.+.+.. ... .+.-..|+|. .+.=++|.|-.||++++.. ..-..|
T Consensus 145 E~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~Rki 224 (1265)
T KOG1920|consen 145 EKPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESETGTRKI 224 (1265)
T ss_pred ccccccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEeccCCceeE
Confidence 111100 000 0000011111 1112458899999999872 333899
Q ss_pred EEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CCCCeEEEE---ecCCcEEEEECCCCce
Q 036314 144 SLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSA---SWDHSVRTWDVEMGKD 219 (347)
Q Consensus 144 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~---s~dg~v~vwd~~~~~~ 219 (347)
++||.+ +..... ... ...--.+++| |.|..+++. ..|+.|.++.- .|-.
T Consensus 225 rV~drE-g~Lns~-------------------se~------~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffEr-NGL~ 277 (1265)
T KOG1920|consen 225 RVYDRE-GALNST-------------------SEP------VEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFER-NGLR 277 (1265)
T ss_pred EEeccc-chhhcc-------------------cCc------ccccccceeecCCCCeEeeeeecCCCCcEEEEec-CCcc
Confidence 999866 211000 000 0011134667 556566554 44557888873 3322
Q ss_pred eee----eeeCe-eeEEEEeeCCCCcEEEE---ecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEE
Q 036314 220 LSD----IFCGK-ALNCIDIGGEGSALIAA---GGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291 (347)
Q Consensus 220 ~~~----~~~~~-~~~~~~~~~~~~~~la~---~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~ 291 (347)
-.. +.... ++..+.|..++ .++|. ......|++|-..+- .....+.+.-..... +.|+|.....|..-
T Consensus 278 hg~f~l~~p~de~~ve~L~Wns~s-diLAv~~~~~e~~~v~lwt~~Ny-hWYLKq~l~~~~~~~--~~W~p~~~~~L~v~ 353 (1265)
T KOG1920|consen 278 HGEFVLPFPLDEKEVEELAWNSNS-DILAVVTSNLENSLVQLWTTGNY-HWYLKQELQFSQKAL--LMWDPVTEKTLHVL 353 (1265)
T ss_pred ccccccCCcccccchheeeecCCC-CceeeeecccccceEEEEEecCe-EEEEEEEEecccccc--ccccCCCceeEEEE
Confidence 221 11222 37778887654 45665 455566999986531 111111221111111 66777655545544
Q ss_pred eCCCcEEEEEc
Q 036314 292 SYDGKVMLWDL 302 (347)
Q Consensus 292 s~D~~i~lwd~ 302 (347)
..+|...++|+
T Consensus 354 ~~sG~~~v~~~ 364 (1265)
T KOG1920|consen 354 RESGQRLVRDF 364 (1265)
T ss_pred ecCCcEEEEEE
Confidence 45666555554
No 330
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=97.16 E-value=0.045 Score=39.69 Aligned_cols=91 Identities=15% Similarity=0.215 Sum_probs=59.9
Q ss_pred CeEEEEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeE
Q 036314 198 ETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISA 277 (347)
Q Consensus 198 ~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~ 277 (347)
..|+.||.|..||+|+-. ..+..+.....+..+.-... ..|+.+..+|+|-+|+-.. + +-..+.-.. +.+
T Consensus 16 ~eLlvGs~D~~IRvf~~~--e~~~Ei~e~~~v~~L~~~~~--~~F~Y~l~NGTVGvY~~~~----R-lWRiKSK~~-~~~ 85 (111)
T PF14783_consen 16 NELLVGSDDFEIRVFKGD--EIVAEITETDKVTSLCSLGG--GRFAYALANGTVGVYDRSQ----R-LWRIKSKNQ-VTS 85 (111)
T ss_pred ceEEEecCCcEEEEEeCC--cEEEEEecccceEEEEEcCC--CEEEEEecCCEEEEEeCcc----e-eeeeccCCC-eEE
Confidence 579999999999999743 45566665666666654333 4688889999999998531 1 222222222 333
Q ss_pred E---EeCCCCCeEEEEEeCCCcEE
Q 036314 278 C---KWHNKSWFHLISASYDGKVM 298 (347)
Q Consensus 278 v---~~s~~~~~~l~s~s~D~~i~ 298 (347)
+ .++.+|...|++|-.+|.|-
T Consensus 86 ~~~~D~~gdG~~eLI~GwsnGkve 109 (111)
T PF14783_consen 86 MAFYDINGDGVPELIVGWSNGKVE 109 (111)
T ss_pred EEEEcCCCCCceEEEEEecCCeEE
Confidence 3 34455666799999998875
No 331
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=97.14 E-value=0.054 Score=39.26 Aligned_cols=69 Identities=16% Similarity=0.181 Sum_probs=47.8
Q ss_pred eEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEE
Q 036314 67 VSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLW 146 (347)
Q Consensus 67 V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iw 146 (347)
|+++.++.-++.....|+.||+|..||+|+=+. .+..+.. .+.|+++.-... ..++-+...|||.+|
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~e-----------~~~Ei~e-~~~v~~L~~~~~-~~F~Y~l~NGTVGvY 68 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGDE-----------IVAEITE-TDKVTSLCSLGG-GRFAYALANGTVGVY 68 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeCCc-----------EEEEEec-ccceEEEEEcCC-CEEEEEecCCEEEEE
Confidence 677877654433335789999999999998432 2233333 456777765544 568889999999999
Q ss_pred ec
Q 036314 147 RT 148 (347)
Q Consensus 147 d~ 148 (347)
+-
T Consensus 69 ~~ 70 (111)
T PF14783_consen 69 DR 70 (111)
T ss_pred eC
Confidence 74
No 332
>KOG3621 consensus WD40 repeat-containing protein [General function prediction only]
Probab=97.08 E-value=0.011 Score=55.71 Aligned_cols=134 Identities=19% Similarity=0.260 Sum_probs=87.7
Q ss_pred CCCCeEEEEecCCcEEEEECCCCceeeeeee--CeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEe----
Q 036314 195 PQQETIYSASWDHSVRTWDVEMGKDLSDIFC--GKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQF---- 268 (347)
Q Consensus 195 ~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~---- 268 (347)
..+++++-|+.-|.+.+|+-..+... .+.. ...+.++..-.+...++|+|+..|.|.++-+... .+.+...+
T Consensus 43 st~~~l~~GsS~G~lyl~~R~~~~~~-~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~-~p~~~~~~t~~d 120 (726)
T KOG3621|consen 43 ATEEYLAMGSSAGSVYLYNRHTGEMR-KLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKE-LPRDLDYVTPCD 120 (726)
T ss_pred cCCceEEEecccceEEEEecCchhhh-cccccCccceEEEEEecchhHhhhhhcCCceEEeehhhcc-CCCcceeecccc
Confidence 36688999999999999986555432 2222 2333333333445568899999999999988653 22222222
Q ss_pred cCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCC----ccceeecCCCCeEEEEeecCCCEEEE
Q 036314 269 SSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTA----WPLSVIDSHKDKVLCADWWRGDSVIS 331 (347)
Q Consensus 269 ~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~----~~~~~~~~h~~~v~~~~~~~~~~l~s 331 (347)
..|...|+++.|++++. .|.+|..-|+|.+-.++.. ...+.+....+.|.-+++..+..|++
T Consensus 121 ~~~~~rVTal~Ws~~~~-k~ysGD~~Gkv~~~~L~s~~~~~~~~q~il~~ds~IVQlD~~q~~LLVS 186 (726)
T KOG3621|consen 121 KSHKCRVTALEWSKNGM-KLYSGDSQGKVVLTELDSRQAFLSKSQEILSEDSEIVQLDYLQSYLLVS 186 (726)
T ss_pred ccCCceEEEEEeccccc-EEeecCCCceEEEEEechhhhhccccceeeccCcceEEeecccceehHh
Confidence 23677899999999996 4999999999999888762 12233333445666666654444444
No 333
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=97.07 E-value=0.12 Score=47.05 Aligned_cols=247 Identities=14% Similarity=0.153 Sum_probs=128.9
Q ss_pred EEEcCCCeEEEE-eeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEE
Q 036314 48 RVWKAGGVCTHI-LEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIA 126 (347)
Q Consensus 48 ~iw~~~~~~~~~-l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~ 126 (347)
.+|+........ +..-.-++..+.++|.+ ..|++...- .|.+|+-.... .+..+. | ..|.-+.
T Consensus 15 ~f~~~~s~~~~~~~~~~~~p~~~~~~SP~G----~~l~~~~~~-~V~~~~g~~~~---------~l~~~~-~-~~V~~~~ 78 (561)
T COG5354 15 VFWNSQSEVIHTRFESENWPVAYVSESPLG----TYLFSEHAA-GVECWGGPSKA---------KLVRFR-H-PDVKYLD 78 (561)
T ss_pred EeecCccccccccccccCcchhheeecCcc----hheehhhcc-ceEEccccchh---------heeeee-c-CCceecc
Confidence 345544333222 33355678888999844 356654444 59999865432 112222 3 4588899
Q ss_pred EeCCCCEEEEeeCCCc---------------EEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccc--e
Q 036314 127 AETSGNMVCSGSWDCT---------------ISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQC--V 189 (347)
Q Consensus 127 ~s~~~~~l~sgs~Dg~---------------I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~--v 189 (347)
|+|.+++|.+=+.... +.+||+.++.. +..+.+.... .
T Consensus 79 fSP~~kYL~tw~~~pi~~pe~e~sp~~~~n~~~vwd~~sg~i-------------------------v~sf~~~~q~~~~ 133 (561)
T COG5354 79 FSPNEKYLVTWSREPIIEPEIEISPFTSKNNVFVWDIASGMI-------------------------VFSFNGISQPYLG 133 (561)
T ss_pred cCcccceeeeeccCCccChhhccCCccccCceeEEeccCcee-------------------------EeeccccCCcccc
Confidence 9999999998665444 77777765421 1222221111 1
Q ss_pred E-EEEeC-CCCeEEEEecCCcEEEEECCCCce-e---eeeeeCeeeEEEEeeCCC-CcEEEE-----ecCCCcEEEEeCC
Q 036314 190 S-SVVWP-QQETIYSASWDHSVRTWDVEMGKD-L---SDIFCGKALNCIDIGGEG-SALIAA-----GGSDPILRIWDPR 257 (347)
Q Consensus 190 ~-~~~~~-~~~~l~s~s~dg~v~vwd~~~~~~-~---~~~~~~~~~~~~~~~~~~-~~~la~-----~~~d~~i~iwd~~ 257 (347)
+ -+.|+ ++.+++=. -...+.++++ ++.. . ..+. ...+....++|.+ ...||. .+.+..+++|.+.
T Consensus 134 Wp~~k~s~~D~y~ARv-v~~sl~i~e~-t~n~~~~p~~~lr-~~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp 210 (561)
T COG5354 134 WPVLKFSIDDKYVARV-VGSSLYIHEI-TDNIEEHPFKNLR-PVGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIP 210 (561)
T ss_pred cceeeeeecchhhhhh-ccCeEEEEec-CCccccCchhhcc-ccceeeEEecCCCCCceEEEEccccCCCCcEEEEEEcc
Confidence 1 22343 33333322 2346889986 3221 1 1111 1234455555542 222222 3456777777765
Q ss_pred CCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeC----------CCcEEEEEcCCCccceeecCCCCeEEEEeecC-C
Q 036314 258 KPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASY----------DGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-G 326 (347)
Q Consensus 258 ~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~----------D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~-~ 326 (347)
... .....++-.- .-..+.|++.|.++|+-.-. ...+.|++++.. .+.....-.++|..+.|.| +
T Consensus 211 ~~s-~l~tk~lfk~--~~~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~-~i~V~~~~~~pVhdf~W~p~S 286 (561)
T COG5354 211 KNS-VLVTKNLFKV--SGVQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRITER-SIPVEKDLKDPVHDFTWEPLS 286 (561)
T ss_pred CCC-eeeeeeeEee--cccEEEEecCCceEEEEEEEeeecccceeccceEEEEeeccc-ccceeccccccceeeeecccC
Confidence 321 1111222111 11357788888765442211 245778888743 3333335578999999975 4
Q ss_pred CE--EEEccCCceEEEee
Q 036314 327 DS--VISGGVDSKLCVSS 342 (347)
Q Consensus 327 ~~--l~s~s~D~~v~vw~ 342 (347)
++ +++|-++.++.+.+
T Consensus 287 ~~F~vi~g~~pa~~s~~~ 304 (561)
T COG5354 287 SRFAVISGYMPASVSVFD 304 (561)
T ss_pred CceeEEecccccceeecc
Confidence 45 44555676666554
No 334
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=96.86 E-value=0.039 Score=54.19 Aligned_cols=133 Identities=20% Similarity=0.213 Sum_probs=84.2
Q ss_pred ecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCC------CcEEEEecCCCcEEEEeCCCCCCCCCe----EEecCCCC
Q 036314 204 SWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEG------SALIAAGGSDPILRIWDPRKPGTSAPV----FQFSSHNS 273 (347)
Q Consensus 204 s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~------~~~la~~~~d~~i~iwd~~~~~~~~~~----~~~~~h~~ 273 (347)
...+.|.-.|++.|+.+..+..+..+....+.|.. ......|-.++.+..||+|..+.. .+ ..+ ....
T Consensus 501 ~~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k-~v~~~~k~Y-~~~~ 578 (794)
T PF08553_consen 501 NNPNKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNK-LVDSQSKQY-SSKN 578 (794)
T ss_pred CCCCceEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCc-eeecccccc-ccCC
Confidence 44577888899999988888765433233333321 122345778999999999964321 11 111 1222
Q ss_pred CeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccce-eecCCCCeEEEEeec-CCCEEEEccCCceEEEee
Q 036314 274 WISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLS-VIDSHKDKVLCADWW-RGDSVISGGVDSKLCVSS 342 (347)
Q Consensus 274 ~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~-~~~~h~~~v~~~~~~-~~~~l~s~s~D~~v~vw~ 342 (347)
...|++-..+| +||.||.+|.|||||- .|..-+ .|.+-.++|..++-+ +|++|++ ..+.-|.|..
T Consensus 579 ~Fs~~aTt~~G--~iavgs~~G~IRLyd~-~g~~AKT~lp~lG~pI~~iDvt~DGkwila-Tc~tyLlLi~ 645 (794)
T PF08553_consen 579 NFSCFATTEDG--YIAVGSNKGDIRLYDR-LGKRAKTALPGLGDPIIGIDVTADGKWILA-TCKTYLLLID 645 (794)
T ss_pred CceEEEecCCc--eEEEEeCCCcEEeecc-cchhhhhcCCCCCCCeeEEEecCCCcEEEE-eecceEEEEE
Confidence 35677777776 5999999999999994 343333 345667899999986 7877443 2344455544
No 335
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=96.71 E-value=0.051 Score=53.40 Aligned_cols=98 Identities=16% Similarity=0.198 Sum_probs=67.3
Q ss_pred CeEEEEecCCcEEEEECCCCc-eeee-----eeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCC
Q 036314 198 ETIYSASWDHSVRTWDVEMGK-DLSD-----IFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSH 271 (347)
Q Consensus 198 ~~l~s~s~dg~v~vwd~~~~~-~~~~-----~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h 271 (347)
...+.|-.++.+-.||.|... .+.. ........|++-... -.||.|+.+|.||+||-- + ......+.+-
T Consensus 543 e~tflGls~n~lfriDpR~~~~k~v~~~~k~Y~~~~~Fs~~aTt~~--G~iavgs~~G~IRLyd~~-g--~~AKT~lp~l 617 (794)
T PF08553_consen 543 EQTFLGLSDNSLFRIDPRLSGNKLVDSQSKQYSSKNNFSCFATTED--GYIAVGSNKGDIRLYDRL-G--KRAKTALPGL 617 (794)
T ss_pred CceEEEECCCceEEeccCCCCCceeeccccccccCCCceEEEecCC--ceEEEEeCCCcEEeeccc-c--hhhhhcCCCC
Confidence 345566778889999998642 2111 112335677776543 368999999999999942 2 1234456677
Q ss_pred CCCeeEEEeCCCCCeEEEEEeCCCcEEEEEc
Q 036314 272 NSWISACKWHNKSWFHLISASYDGKVMLWDL 302 (347)
Q Consensus 272 ~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~ 302 (347)
.++|..|..+.||.+.||||- .-+.|++.
T Consensus 618 G~pI~~iDvt~DGkwilaTc~--tyLlLi~t 646 (794)
T PF08553_consen 618 GDPIIGIDVTADGKWILATCK--TYLLLIDT 646 (794)
T ss_pred CCCeeEEEecCCCcEEEEeec--ceEEEEEE
Confidence 899999999999998777765 36777774
No 336
>PRK02888 nitrous-oxide reductase; Validated
Probab=96.61 E-value=0.3 Score=46.56 Aligned_cols=105 Identities=14% Similarity=0.122 Sum_probs=73.1
Q ss_pred CCCeEEEEecCCcEEEEECCC-----CceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCC-----CCC-
Q 036314 196 QQETIYSASWDHSVRTWDVEM-----GKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGT-----SAP- 264 (347)
Q Consensus 196 ~~~~l~s~s~dg~v~vwd~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~-----~~~- 264 (347)
++++... .+++|.+.|.++ ...+..+..++....++++|++..+++++..++++.+.|+.+... ..+
T Consensus 287 dGK~~~V--~gn~V~VID~~t~~~~~~~v~~yIPVGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~ 364 (635)
T PRK02888 287 AGKFKTI--GGSKVPVVDGRKAANAGSALTRYVPVPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPR 364 (635)
T ss_pred CCCEEEE--CCCEEEEEECCccccCCcceEEEEECCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCcc
Confidence 5555443 367899999988 455666777777888899998888888899999999999875321 000
Q ss_pred ---eEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCC
Q 036314 265 ---VFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRT 304 (347)
Q Consensus 265 ---~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~ 304 (347)
..+..-.... .-.+|.++|. ...|--.|..|-.|++.+
T Consensus 365 ~~vvaevevGlGP-LHTaFDg~G~-aytslf~dsqv~kwn~~~ 405 (635)
T PRK02888 365 DAVVAEPELGLGP-LHTAFDGRGN-AYTTLFLDSQIVKWNIEA 405 (635)
T ss_pred ceEEEeeccCCCc-ceEEECCCCC-EEEeEeecceeEEEehHH
Confidence 1122111112 2367888874 577778899999999876
No 337
>KOG4649 consensus PQQ (pyrrolo-quinoline quinone) repeat protein [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.54 E-value=0.39 Score=40.32 Aligned_cols=62 Identities=13% Similarity=0.029 Sum_probs=39.3
Q ss_pred CCEEEEEecCCeEEEEcCC-CeEEEEeeccCCceEE-EEEeecCCCceEEEEEccCCCcEEEEeccccc
Q 036314 35 PGFILTGCYDNLGRVWKAG-GVCTHILEGHCGAVSS-VNIIKSDGLKYVTVATASKDQTLRLWKFDAEE 101 (347)
Q Consensus 35 ~~~l~sg~~d~~i~iw~~~-~~~~~~l~~h~~~V~~-v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~ 101 (347)
+++++-|++.|.+++-+.. |.....+..- +.|.+ ....+++ ..+..++.|++...-|..+..
T Consensus 63 gdfVV~GCy~g~lYfl~~~tGs~~w~f~~~-~~vk~~a~~d~~~----glIycgshd~~~yalD~~~~~ 126 (354)
T KOG4649|consen 63 GDFVVLGCYSGGLYFLCVKTGSQIWNFVIL-ETVKVRAQCDFDG----GLIYCGSHDGNFYALDPKTYG 126 (354)
T ss_pred CCEEEEEEccCcEEEEEecchhheeeeeeh-hhhccceEEcCCC----ceEEEecCCCcEEEecccccc
Confidence 4578899999998888753 5333333322 11221 1223322 368999999999999976544
No 338
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=96.50 E-value=0.18 Score=46.72 Aligned_cols=148 Identities=11% Similarity=0.125 Sum_probs=73.1
Q ss_pred eeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEE
Q 036314 114 ILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVV 193 (347)
Q Consensus 114 ~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 193 (347)
.+....-....+.++|+|++++. ..||...|+....... . ..+.-..++
T Consensus 27 ~lg~~~~~p~~ls~npngr~v~V-~g~geY~iyt~~~~r~---------------------------k---~~G~g~~~v 75 (443)
T PF04053_consen 27 ELGSCEIYPQSLSHNPNGRFVLV-CGDGEYEIYTALAWRN---------------------------K---AFGSGLSFV 75 (443)
T ss_dssp EEEE-SS--SEEEE-TTSSEEEE-EETTEEEEEETTTTEE---------------------------E---EEEE-SEEE
T ss_pred cCCCCCcCCeeEEECCCCCEEEE-EcCCEEEEEEccCCcc---------------------------c---ccCceeEEE
Confidence 34445566788999999998887 6678888886321100 0 011123355
Q ss_pred eCCCCeEEEEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCC
Q 036314 194 WPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNS 273 (347)
Q Consensus 194 ~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~ 273 (347)
|.....++.-...++|+++.--.......+..+..+..+ .+ +.++...+ ++.|.+||.... ..+..+.. .
T Consensus 76 w~~~n~yAv~~~~~~I~I~kn~~~~~~k~i~~~~~~~~I--f~--G~LL~~~~-~~~i~~yDw~~~---~~i~~i~v--~ 145 (443)
T PF04053_consen 76 WSSRNRYAVLESSSTIKIYKNFKNEVVKSIKLPFSVEKI--FG--GNLLGVKS-SDFICFYDWETG---KLIRRIDV--S 145 (443)
T ss_dssp E-TSSEEEEE-TTS-EEEEETTEE-TT-----SS-EEEE--E---SSSEEEEE-TTEEEEE-TTT-----EEEEESS---
T ss_pred EecCccEEEEECCCeEEEEEcCccccceEEcCCcccceE--Ec--CcEEEEEC-CCCEEEEEhhHc---ceeeEEec--C
Confidence 655666777777888999632222222333333222222 22 34554444 448999998743 33555532 2
Q ss_pred CeeEEEeCCCCCeEEEEEeCCCcEEEEEcCC
Q 036314 274 WISACKWHNKSWFHLISASYDGKVMLWDLRT 304 (347)
Q Consensus 274 ~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~ 304 (347)
.|..+.|++++.. +|-.+.| .+.|++.+.
T Consensus 146 ~vk~V~Ws~~g~~-val~t~~-~i~il~~~~ 174 (443)
T PF04053_consen 146 AVKYVIWSDDGEL-VALVTKD-SIYILKYNL 174 (443)
T ss_dssp E-EEEEE-TTSSE-EEEE-S--SEEEEEE-H
T ss_pred CCcEEEEECCCCE-EEEEeCC-eEEEEEecc
Confidence 4889999999864 5555544 677776543
No 339
>PRK02888 nitrous-oxide reductase; Validated
Probab=96.47 E-value=0.87 Score=43.60 Aligned_cols=94 Identities=14% Similarity=0.050 Sum_probs=60.2
Q ss_pred CCcEEEEeCCCCC--CCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCcc------------ceeecC
Q 036314 248 DPILRIWDPRKPG--TSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWP------------LSVIDS 313 (347)
Q Consensus 248 d~~i~iwd~~~~~--~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~------------~~~~~~ 313 (347)
++.|.+.|.+... .......+. -......++++||+.+.++++..+.+|-|.|+++.+. ..+.+-
T Consensus 295 gn~V~VID~~t~~~~~~~v~~yIP-VGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaevev 373 (635)
T PRK02888 295 GSKVPVVDGRKAANAGSALTRYVP-VPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPEL 373 (635)
T ss_pred CCEEEEEECCccccCCcceEEEEE-CCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEeecc
Confidence 4668888876410 011223332 3344567899999999888888999999999987543 122221
Q ss_pred CCCeEEEEeec-CCCEEEEccCCceEEEeec
Q 036314 314 HKDKVLCADWW-RGDSVISGGVDSKLCVSSG 343 (347)
Q Consensus 314 h~~~v~~~~~~-~~~~l~s~s~D~~v~vw~~ 343 (347)
-.++ +-.+|. +|+.+.|--.|..|..|..
T Consensus 374 GlGP-LHTaFDg~G~aytslf~dsqv~kwn~ 403 (635)
T PRK02888 374 GLGP-LHTAFDGRGNAYTTLFLDSQIVKWNI 403 (635)
T ss_pred CCCc-ceEEECCCCCEEEeEeecceeEEEeh
Confidence 1223 334674 4667778788999999974
No 340
>KOG2444 consensus WD40 repeat protein [General function prediction only]
Probab=96.24 E-value=0.016 Score=47.39 Aligned_cols=104 Identities=13% Similarity=0.162 Sum_probs=64.4
Q ss_pred CCEEEEEecCCeEEEEcCC--CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCcccccee
Q 036314 35 PGFILTGCYDNLGRVWKAG--GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSF 112 (347)
Q Consensus 35 ~~~l~sg~~d~~i~iw~~~--~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~ 112 (347)
+..++.|+.||.|.+|+.. |.....+..-...|.++ .|... +.....+++.||.||.|++..++ .+
T Consensus 70 ~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~--Ip~~~-~~~~~c~~~~dg~ir~~n~~p~k---------~~ 137 (238)
T KOG2444|consen 70 SAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLG--IPNGR-DSSLGCVGAQDGRIRACNIKPNK---------VL 137 (238)
T ss_pred CceEEeecccceEEEecCCccchHHHhhhcccccceec--ccccc-ccceeEEeccCCceeeeccccCc---------ee
Confidence 3468889999999999864 22111111111222222 23222 33367889999999999986543 22
Q ss_pred eeeeccc-cceEEEEEeCCCCEEEEe--eCCCcEEEEecCC
Q 036314 113 KILRGHK-ASVHSIAAETSGNMVCSG--SWDCTISLWRTND 150 (347)
Q Consensus 113 ~~~~~h~-~~V~~v~~s~~~~~l~sg--s~Dg~I~iwd~~~ 150 (347)
.....|+ .++........+..++.+ |.|..++.|+++.
T Consensus 138 g~~g~h~~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~ 178 (238)
T KOG2444|consen 138 GYVGQHNFESGEELIVVGSDEFLKIADTSHDRVLKKWNVEK 178 (238)
T ss_pred eeeccccCCCcceeEEecCCceEEeeccccchhhhhcchhh
Confidence 2334465 556666666667777777 8888888888764
No 341
>KOG4640 consensus Anaphase-promoting complex (APC), subunit 4 [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=96.14 E-value=0.037 Score=51.69 Aligned_cols=90 Identities=17% Similarity=0.144 Sum_probs=65.0
Q ss_pred eEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCee-EEEeCCCCCeEEEEEeCCCcEEEEEcCCCcc
Q 036314 229 LNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWIS-ACKWHNKSWFHLISASYDGKVMLWDLRTAWP 307 (347)
Q Consensus 229 ~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~-~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~ 307 (347)
+.-+.+.| ...++|.+..+|.+-+..+. ...+.+++-|...++ +++|.|||. +||.|=.||+|++.|+.++..
T Consensus 23 i~~~ewnP-~~dLiA~~t~~gelli~R~n----~qRlwtip~p~~~v~~sL~W~~DGk-llaVg~kdG~I~L~Dve~~~~ 96 (665)
T KOG4640|consen 23 IKRIEWNP-KMDLIATRTEKGELLIHRLN----WQRLWTIPIPGENVTASLCWRPDGK-LLAVGFKDGTIRLHDVEKGGR 96 (665)
T ss_pred eEEEEEcC-ccchhheeccCCcEEEEEec----cceeEeccCCCCccceeeeecCCCC-EEEEEecCCeEEEEEccCCCc
Confidence 34455644 34578888899988888664 233667765666666 999999984 799999999999999999877
Q ss_pred ceee-cCCCCeEEEEeec
Q 036314 308 LSVI-DSHKDKVLCADWW 324 (347)
Q Consensus 308 ~~~~-~~h~~~v~~~~~~ 324 (347)
+..+ .--..+|.++-|+
T Consensus 97 l~~~~~s~e~~is~~~w~ 114 (665)
T KOG4640|consen 97 LVSFLFSVETDISKGIWD 114 (665)
T ss_pred eeccccccccchheeecc
Confidence 6652 1124567777775
No 342
>KOG2444 consensus WD40 repeat protein [General function prediction only]
Probab=96.04 E-value=0.016 Score=47.35 Aligned_cols=142 Identities=14% Similarity=0.021 Sum_probs=78.4
Q ss_pred EEEEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEE
Q 036314 200 IYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACK 279 (347)
Q Consensus 200 l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~ 279 (347)
+...+.|+.|+-++++.-+.-. .....+.+....+....-++.|+.+|.|++|.....+....+. ..-...|.+..
T Consensus 33 l~~~sa~~~v~~~~~~k~k~s~--rse~~~~e~~~v~~~~~~~~vG~~dg~v~~~n~n~~g~~~d~~--~s~~e~i~~~I 108 (238)
T KOG2444|consen 33 LRATSADGLVRERKVRKHKESC--RSERFIDEGQRVVTASAKLMVGTSDGAVYVFNWNLEGAHSDRV--CSGEESIDLGI 108 (238)
T ss_pred hccccCCcccccchhhhhhhhh--hhhhhhhcceeecccCceEEeecccceEEEecCCccchHHHhh--hcccccceecc
Confidence 4556788888888775432110 0000111111112223457889999999999875322211111 11122233322
Q ss_pred eCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCC-CeEEEEee-cCCCEEEEc--cCCceEEEeeccc
Q 036314 280 WHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHK-DKVLCADW-WRGDSVISG--GVDSKLCVSSGVS 345 (347)
Q Consensus 280 ~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~-~~v~~~~~-~~~~~l~s~--s~D~~v~vw~~~~ 345 (347)
-.-+...+..+++.||.|+.|.+..++.+.....|. ..+....- ..+..++.+ |.|..++.|..-+
T Consensus 109 p~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~ 178 (238)
T KOG2444|consen 109 PNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESGEELIVVGSDEFLKIADTSHDRVLKKWNVEK 178 (238)
T ss_pred ccccccceeEEeccCCceeeeccccCceeeeeccccCCCcceeEEecCCceEEeeccccchhhhhcchhh
Confidence 222322368888999999999998877666655666 33332222 345566666 7788888887543
No 343
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only]
Probab=96.03 E-value=1.1 Score=43.14 Aligned_cols=226 Identities=12% Similarity=0.113 Sum_probs=109.0
Q ss_pred CCCEEEEEecCC------eEEEEcCC-CeEEE--EeeccCCceEEEEEeecCCCceEEEEEccCC------CcEEEEecc
Q 036314 34 NPGFILTGCYDN------LGRVWKAG-GVCTH--ILEGHCGAVSSVNIIKSDGLKYVTVATASKD------QTLRLWKFD 98 (347)
Q Consensus 34 ~~~~l~sg~~d~------~i~iw~~~-~~~~~--~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~D------g~v~~wd~~ 98 (347)
.+.+++.||.++ .+..+|+. +.... .+. +.....++++.. +...++|+.| .++..||..
T Consensus 284 ~~~l~~vGG~~~~~~~~~~ve~yd~~~~~w~~~a~m~-~~r~~~~~~~~~-----~~lYv~GG~~~~~~~l~~ve~YD~~ 357 (571)
T KOG4441|consen 284 SGKLVAVGGYNRQGQSLRSVECYDPKTNEWSSLAPMP-SPRCRVGVAVLN-----GKLYVVGGYDSGSDRLSSVERYDPR 357 (571)
T ss_pred CCeEEEECCCCCCCcccceeEEecCCcCcEeecCCCC-cccccccEEEEC-----CEEEEEccccCCCcccceEEEecCC
Confidence 455788888884 57777764 32222 222 222233444443 1356788888 357777776
Q ss_pred ccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcE-----EEEecCCCCCCCccceeeeccCCCcccccc
Q 036314 99 AEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTI-----SLWRTNDSDAAGNQVSIKKRKGNNQVEEPQ 173 (347)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I-----~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (347)
.++ +....++.+- .+.-.+.. -+|.+.+.||.||.- -.||..+....
T Consensus 358 ~~~----W~~~a~M~~~-R~~~~v~~----l~g~iYavGG~dg~~~l~svE~YDp~~~~W~------------------- 409 (571)
T KOG4441|consen 358 TNQ----WTPVAPMNTK-RSDFGVAV----LDGKLYAVGGFDGEKSLNSVECYDPVTNKWT------------------- 409 (571)
T ss_pred CCc----eeccCCccCc-cccceeEE----ECCEEEEEeccccccccccEEEecCCCCccc-------------------
Confidence 543 1111111111 11222222 257888899999663 34443322110
Q ss_pred ccccccccccCCccceEEEEeCCCCeEEEEecCC------cEEEEECCCCceeee--eeeCeeeEEEEeeCCCCcEEEEe
Q 036314 174 LEGEAISTLVGHTQCVSSVVWPQQETIYSASWDH------SVRTWDVEMGKDLSD--IFCGKALNCIDIGGEGSALIAAG 245 (347)
Q Consensus 174 ~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~dg------~v~vwd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~la~~ 245 (347)
....+.... .-.+++.-.+...+.|+.++ ++..||..++..... +.....-..++. -++.+.+.|
T Consensus 410 ----~va~m~~~r-~~~gv~~~~g~iYi~GG~~~~~~~l~sve~YDP~t~~W~~~~~M~~~R~~~g~a~--~~~~iYvvG 482 (571)
T KOG4441|consen 410 ----PVAPMLTRR-SGHGVAVLGGKLYIIGGGDGSSNCLNSVECYDPETNTWTLIAPMNTRRSGFGVAV--LNGKIYVVG 482 (571)
T ss_pred ----ccCCCCcce-eeeEEEEECCEEEEEcCcCCCccccceEEEEcCCCCceeecCCcccccccceEEE--ECCEEEEEC
Confidence 000000000 11112223556667777665 467888877654321 111111111222 345677888
Q ss_pred cCCC-----cEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCC-----cEEEEEcCC
Q 036314 246 GSDP-----ILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDG-----KVMLWDLRT 304 (347)
Q Consensus 246 ~~d~-----~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~-----~i~lwd~~~ 304 (347)
|.|+ +|..||++.. ....+..+....+.+..+.+. ..+.+.|+.|+ +|..||..+
T Consensus 483 G~~~~~~~~~VE~ydp~~~-~W~~v~~m~~~rs~~g~~~~~---~~ly~vGG~~~~~~l~~ve~ydp~~ 547 (571)
T KOG4441|consen 483 GFDGTSALSSVERYDPETN-QWTMVAPMTSPRSAVGVVVLG---GKLYAVGGFDGNNNLNTVECYDPET 547 (571)
T ss_pred CccCCCccceEEEEcCCCC-ceeEcccCccccccccEEEEC---CEEEEEecccCccccceeEEcCCCC
Confidence 8775 3778888643 222222233333333334442 24567777775 355666554
No 344
>KOG2395 consensus Protein involved in vacuole import and degradation [Intracellular trafficking, secretion, and vesicular transport]
Probab=95.88 E-value=0.18 Score=46.44 Aligned_cols=136 Identities=18% Similarity=0.201 Sum_probs=83.2
Q ss_pred EEEEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCC-------CcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCC
Q 036314 200 IYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEG-------SALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHN 272 (347)
Q Consensus 200 l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~ 272 (347)
|.++.....+.=-|++.|+.+..+..+..++.+++.|+. ... ..|-.|+.|.-||+|-.+.- .+....+|.
T Consensus 349 l~~~~~~~~l~klDIE~GKIVeEWk~~~di~mv~~t~d~K~~Ql~~e~T-lvGLs~n~vfriDpRv~~~~-kl~~~q~kq 426 (644)
T KOG2395|consen 349 LMDGGEQDKLYKLDIERGKIVEEWKFEDDINMVDITPDFKFAQLTSEQT-LVGLSDNSVFRIDPRVQGKN-KLAVVQSKQ 426 (644)
T ss_pred eeCCCCcCcceeeecccceeeeEeeccCCcceeeccCCcchhccccccc-EEeecCCceEEecccccCcc-eeeeeeccc
Confidence 445555566777899999988888766666666665432 112 34777899999999854321 111112221
Q ss_pred ----CCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeec-CCCEEEEccCCceEEE
Q 036314 273 ----SWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWW-RGDSVISGGVDSKLCV 340 (347)
Q Consensus 273 ----~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~-~~~~l~s~s~D~~v~v 340 (347)
.--.|.+-..+| ++|.||.+|.|||||--....-..+-+-..+|.-++-+ +|++|+. ..+..+.|
T Consensus 427 y~~k~nFsc~aTT~sG--~IvvgS~~GdIRLYdri~~~AKTAlPgLG~~I~hVdvtadGKwil~-Tc~tyLlL 496 (644)
T KOG2395|consen 427 YSTKNNFSCFATTESG--YIVVGSLKGDIRLYDRIGRRAKTALPGLGDAIKHVDVTADGKWILA-TCKTYLLL 496 (644)
T ss_pred cccccccceeeecCCc--eEEEeecCCcEEeehhhhhhhhhcccccCCceeeEEeeccCcEEEE-ecccEEEE
Confidence 123455555555 59999999999999973222233455666788877774 6776332 33444443
No 345
>PHA02713 hypothetical protein; Provisional
Probab=95.74 E-value=2.1 Score=41.31 Aligned_cols=93 Identities=8% Similarity=0.003 Sum_probs=48.5
Q ss_pred cEEEEECCCCceee--eeeeCeeeEEEEeeCCCCcEEEEecCC------CcEEEEeCCCCCCCCCeEEecCCCCCeeEEE
Q 036314 208 SVRTWDVEMGKDLS--DIFCGKALNCIDIGGEGSALIAAGGSD------PILRIWDPRKPGTSAPVFQFSSHNSWISACK 279 (347)
Q Consensus 208 ~v~vwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~la~~~~d------~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~ 279 (347)
++..||.++.+... .+.......+++. -++.+.+.||.+ ..+..||+...+....+..+.........+.
T Consensus 433 ~ve~YDP~td~W~~v~~m~~~r~~~~~~~--~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~~~~~~~ 510 (557)
T PHA02713 433 KVIRYDTVNNIWETLPNFWTGTIRPGVVS--HKDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLSALHTIL 510 (557)
T ss_pred eEEEECCCCCeEeecCCCCcccccCcEEE--ECCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCcccccceeEE
Confidence 47778887765432 1111111111222 134566777654 3467899875112322333333333344444
Q ss_pred eCCCCCeEEEEEeCCC--cEEEEEcCCC
Q 036314 280 WHNKSWFHLISASYDG--KVMLWDLRTA 305 (347)
Q Consensus 280 ~s~~~~~~l~s~s~D~--~i~lwd~~~~ 305 (347)
+ ++ .+.+.|+.|+ ++..||+.+.
T Consensus 511 ~--~~-~iyv~Gg~~~~~~~e~yd~~~~ 535 (557)
T PHA02713 511 H--DN-TIMMLHCYESYMLQDTFNVYTY 535 (557)
T ss_pred E--CC-EEEEEeeecceeehhhcCcccc
Confidence 4 33 5678888888 7777887764
No 346
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.73 E-value=1.1 Score=38.23 Aligned_cols=71 Identities=10% Similarity=0.141 Sum_probs=42.9
Q ss_pred CCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeecCCCEEEEccCCceEEEeecc
Q 036314 271 HNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 271 h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~D~~v~vw~~~ 344 (347)
-.++|-+++.+.+.....+|.=.....-+||..+|..+..-. --.+-.|+-..+. ++..|.+|.+++++++
T Consensus 278 ~anYigsiA~n~~~glV~lTSP~GN~~vi~da~tG~vv~~a~--l~daaGva~~~~g-f~vssg~G~~~~~s~~ 348 (366)
T COG3490 278 FANYIGSIAANRRDGLVALTSPRGNRAVIWDAATGAVVSEAA--LPDAAGVAAAKGG-FAVSSGQGRIIFYSRA 348 (366)
T ss_pred HHhhhhheeecccCCeEEEecCCCCeEEEEEcCCCcEEeccc--ccccccceeccCc-eEEecCCceEEecccc
Confidence 346788899987766544454466678899999987543211 1122223322333 4444678888887765
No 347
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only]
Probab=95.70 E-value=2.2 Score=41.26 Aligned_cols=137 Identities=18% Similarity=0.175 Sum_probs=69.0
Q ss_pred CCCeEEEEecCC-----cEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCC------CcEEEEeCCCCCCCCC
Q 036314 196 QQETIYSASWDH-----SVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSD------PILRIWDPRKPGTSAP 264 (347)
Q Consensus 196 ~~~~l~s~s~dg-----~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d------~~i~iwd~~~~~~~~~ 264 (347)
++...+.|+.|| ++-.||.++.+.-..-.............-++.+.++||.+ .++..||+... ....
T Consensus 380 ~g~iYavGG~dg~~~l~svE~YDp~~~~W~~va~m~~~r~~~gv~~~~g~iYi~GG~~~~~~~l~sve~YDP~t~-~W~~ 458 (571)
T KOG4441|consen 380 DGKLYAVGGFDGEKSLNSVECYDPVTNKWTPVAPMLTRRSGHGVAVLGGKLYIIGGGDGSSNCLNSVECYDPETN-TWTL 458 (571)
T ss_pred CCEEEEEeccccccccccEEEecCCCCcccccCCCCcceeeeEEEEECCEEEEEcCcCCCccccceEEEEcCCCC-ceee
Confidence 566677888886 36678877654322111111112222222345677888754 45678887643 2222
Q ss_pred eEEecCCCCCeeEEEeCCCCCeEEEEEeCCCc-----EEEEEcCCCcc--ceeecCCCCeEEEEeecCCCEEEEccCCce
Q 036314 265 VFQFSSHNSWISACKWHNKSWFHLISASYDGK-----VMLWDLRTAWP--LSVIDSHKDKVLCADWWRGDSVISGGVDSK 337 (347)
Q Consensus 265 ~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~-----i~lwd~~~~~~--~~~~~~h~~~v~~~~~~~~~~l~s~s~D~~ 337 (347)
...+.--........++ + .+.+.|+.|+. |..+|.++.+- +..+......+..+. ..+...|.|+.|+.
T Consensus 459 ~~~M~~~R~~~g~a~~~--~-~iYvvGG~~~~~~~~~VE~ydp~~~~W~~v~~m~~~rs~~g~~~-~~~~ly~vGG~~~~ 534 (571)
T KOG4441|consen 459 IAPMNTRRSGFGVAVLN--G-KIYVVGGFDGTSALSSVERYDPETNQWTMVAPMTSPRSAVGVVV-LGGKLYAVGGFDGN 534 (571)
T ss_pred cCCcccccccceEEEEC--C-EEEEECCccCCCccceEEEEcCCCCceeEcccCccccccccEEE-ECCEEEEEecccCc
Confidence 22222222222223332 2 46777777763 77788876532 222222233333333 35667788887765
No 348
>KOG4640 consensus Anaphase-promoting complex (APC), subunit 4 [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=95.65 E-value=0.064 Score=50.15 Aligned_cols=89 Identities=17% Similarity=0.184 Sum_probs=64.9
Q ss_pred cceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceE-EEEe-CCC
Q 036314 120 ASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVS-SVVW-PQQ 197 (347)
Q Consensus 120 ~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~-~~~~-~~~ 197 (347)
..+.-+.|+|.-.++|.+..+|.+-+.+++-. .+-++.-|...+. +++| |+|
T Consensus 21 ~~i~~~ewnP~~dLiA~~t~~gelli~R~n~q--------------------------Rlwtip~p~~~v~~sL~W~~DG 74 (665)
T KOG4640|consen 21 INIKRIEWNPKMDLIATRTEKGELLIHRLNWQ--------------------------RLWTIPIPGENVTASLCWRPDG 74 (665)
T ss_pred cceEEEEEcCccchhheeccCCcEEEEEeccc--------------------------eeEeccCCCCccceeeeecCCC
Confidence 44667889999999999999999888876521 1223343445555 8999 688
Q ss_pred CeEEEEecCCcEEEEECCCCceeeee--eeCeeeEEEEe
Q 036314 198 ETIYSASWDHSVRTWDVEMGKDLSDI--FCGKALNCIDI 234 (347)
Q Consensus 198 ~~l~s~s~dg~v~vwd~~~~~~~~~~--~~~~~~~~~~~ 234 (347)
+.|+.|-.||+|++.|++.+..+... .....+.++-|
T Consensus 75 kllaVg~kdG~I~L~Dve~~~~l~~~~~s~e~~is~~~w 113 (665)
T KOG4640|consen 75 KLLAVGFKDGTIRLHDVEKGGRLVSFLFSVETDISKGIW 113 (665)
T ss_pred CEEEEEecCCeEEEEEccCCCceeccccccccchheeec
Confidence 89999999999999999998777652 23344555555
No 349
>KOG2079 consensus Vacuolar assembly/sorting protein VPS8 [Intracellular trafficking, secretion, and vesicular transport]
Probab=95.50 E-value=0.052 Score=53.82 Aligned_cols=94 Identities=19% Similarity=0.258 Sum_probs=66.9
Q ss_pred EEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEE
Q 036314 241 LIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLC 320 (347)
Q Consensus 241 ~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~ 320 (347)
.++.|+..|.+-.+|.+.. ..+...-..-..+|.+++|+.+|. +++.|-.+|.|.+||+..+.+++.+..|..++.+
T Consensus 101 ~ivi~Ts~ghvl~~d~~~n--L~~~~~ne~v~~~Vtsvafn~dg~-~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t~ 177 (1206)
T KOG2079|consen 101 PIVIGTSHGHVLLSDMTGN--LGPLHQNERVQGPVTSVAFNQDGS-LLLAGLGDGHVTVWDMHRAKILKVITEHGAPVTG 177 (1206)
T ss_pred eEEEEcCchhhhhhhhhcc--cchhhcCCccCCcceeeEecCCCc-eeccccCCCcEEEEEccCCcceeeeeecCCccce
Confidence 5677888888888887642 222222223345799999999985 5777889999999999998888888777766666
Q ss_pred Eeec----CCCEEEEccCCce
Q 036314 321 ADWW----RGDSVISGGVDSK 337 (347)
Q Consensus 321 ~~~~----~~~~l~s~s~D~~ 337 (347)
+-+. .+..+.++..-|.
T Consensus 178 vi~v~~t~~nS~llt~D~~Gs 198 (1206)
T KOG2079|consen 178 VIFVGRTSQNSKLLTSDTGGS 198 (1206)
T ss_pred EEEEEEeCCCcEEEEccCCCc
Confidence 5553 3335777776665
No 350
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=95.43 E-value=0.049 Score=32.91 Aligned_cols=31 Identities=16% Similarity=0.278 Sum_probs=28.0
Q ss_pred ccceEEEEEeCCCCEEEEeeCCCcEEEEecC
Q 036314 119 KASVHSIAAETSGNMVCSGSWDCTISLWRTN 149 (347)
Q Consensus 119 ~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~ 149 (347)
...|.+++|+|..+++|.++.||.|.++++.
T Consensus 11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl~ 41 (47)
T PF12894_consen 11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRLN 41 (47)
T ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEECC
Confidence 3458899999999999999999999999873
No 351
>KOG3617 consensus WD40 and TPR repeat-containing protein [General function prediction only]
Probab=95.34 E-value=0.065 Score=51.92 Aligned_cols=92 Identities=15% Similarity=0.217 Sum_probs=67.8
Q ss_pred CCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeec-C
Q 036314 247 SDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWW-R 325 (347)
Q Consensus 247 ~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~-~ 325 (347)
..|.|.||--. +.+..-.+++-| +.++.|+|.. ..|+.|-.-|.+.+|...+.+.-..-..|+.++..+.|| +
T Consensus 39 r~GSVtIfadt--GEPqr~Vt~P~h---atSLCWHpe~-~vLa~gwe~g~~~v~~~~~~e~htv~~th~a~i~~l~wS~~ 112 (1416)
T KOG3617|consen 39 RGGSVTIFADT--GEPQRDVTYPVH---ATSLCWHPEE-FVLAQGWEMGVSDVQKTNTTETHTVVETHPAPIQGLDWSHD 112 (1416)
T ss_pred CCceEEEEecC--CCCCccccccee---hhhhccChHH-HHHhhccccceeEEEecCCceeeeeccCCCCCceeEEecCC
Confidence 35778888421 122222233333 4568999986 468888889999999988765544556799999999998 5
Q ss_pred CCEEEEccCCceEEEeecc
Q 036314 326 GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 326 ~~~l~s~s~D~~v~vw~~~ 344 (347)
|+.|+|+..-|.|.+|+--
T Consensus 113 G~~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 113 GTVLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred CCeEEEcCCCceeEEEEee
Confidence 8899999999999999865
No 352
>PHA02713 hypothetical protein; Provisional
Probab=95.34 E-value=1.7 Score=41.83 Aligned_cols=133 Identities=8% Similarity=0.021 Sum_probs=63.4
Q ss_pred CCCeEEEEecCC-----cEEEEECCCCceee--eeeeCee-eEEEEeeCCCCcEEEEecCC-------------------
Q 036314 196 QQETIYSASWDH-----SVRTWDVEMGKDLS--DIFCGKA-LNCIDIGGEGSALIAAGGSD------------------- 248 (347)
Q Consensus 196 ~~~~l~s~s~dg-----~v~vwd~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~la~~~~d------------------- 248 (347)
++...+.||.++ ++..||..+..... .+..... ...+.+ ++.+.+.||.+
T Consensus 351 ~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~~~~mp~~r~~~~~~~~---~g~IYviGG~~~~~~~~~~~~~~~~~~~~~ 427 (557)
T PHA02713 351 DDTIYAIGGQNGTNVERTIECYTMGDDKWKMLPDMPIALSSYGMCVL---DQYIYIIGGRTEHIDYTSVHHMNSIDMEED 427 (557)
T ss_pred CCEEEEECCcCCCCCCceEEEEECCCCeEEECCCCCcccccccEEEE---CCEEEEEeCCCccccccccccccccccccc
Confidence 455556666654 47789988764432 1111111 111222 35567777754
Q ss_pred ----CcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCC------CcEEEEEcCC-C--ccceeecCCC
Q 036314 249 ----PILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYD------GKVMLWDLRT-A--WPLSVIDSHK 315 (347)
Q Consensus 249 ----~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D------~~i~lwd~~~-~--~~~~~~~~h~ 315 (347)
+.+..||+... ....+..+.........+.+ ++ .+.+.|+.+ ..+..||.++ . ..+..+....
T Consensus 428 ~~~~~~ve~YDP~td-~W~~v~~m~~~r~~~~~~~~--~~-~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r 503 (557)
T PHA02713 428 THSSNKVIRYDTVNN-IWETLPNFWTGTIRPGVVSH--KD-DIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRL 503 (557)
T ss_pred ccccceEEEECCCCC-eEeecCCCCcccccCcEEEE--CC-EEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCccc
Confidence 24777887642 12111111111111122333 23 344555543 2467899886 2 2233332222
Q ss_pred CeEEEEeecCCCEEEEccCCc
Q 036314 316 DKVLCADWWRGDSVISGGVDS 336 (347)
Q Consensus 316 ~~v~~~~~~~~~~l~s~s~D~ 336 (347)
.. .+++-..|+..+.||.|+
T Consensus 504 ~~-~~~~~~~~~iyv~Gg~~~ 523 (557)
T PHA02713 504 SA-LHTILHDNTIMMLHCYES 523 (557)
T ss_pred cc-ceeEEECCEEEEEeeecc
Confidence 22 223333677888998887
No 353
>KOG2079 consensus Vacuolar assembly/sorting protein VPS8 [Intracellular trafficking, secretion, and vesicular transport]
Probab=95.29 E-value=0.073 Score=52.88 Aligned_cols=99 Identities=16% Similarity=0.220 Sum_probs=67.8
Q ss_pred CCEEEEEecCCeEEEEcCCCeEE--EEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCcccccee
Q 036314 35 PGFILTGCYDNLGRVWKAGGVCT--HILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSF 112 (347)
Q Consensus 35 ~~~l~sg~~d~~i~iw~~~~~~~--~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~ 112 (347)
...+|.|+..|.+...|..+..- +.-..-+++|.+++|..+ +..++.|-.+|.|.+||+..++ .+
T Consensus 99 ~~~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~d----g~~l~~G~~~G~V~v~D~~~~k---------~l 165 (1206)
T KOG2079|consen 99 VVPIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQD----GSLLLAGLGDGHVTVWDMHRAK---------IL 165 (1206)
T ss_pred eeeEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCC----CceeccccCCCcEEEEEccCCc---------ce
Confidence 45688888888888888766432 222234578999999873 3578999999999999998754 34
Q ss_pred eeeeccccceEEEE---EeCCCCEEEEeeCCCcEEEEec
Q 036314 113 KILRGHKASVHSIA---AETSGNMVCSGSWDCTISLWRT 148 (347)
Q Consensus 113 ~~~~~h~~~V~~v~---~s~~~~~l~sgs~Dg~I~iwd~ 148 (347)
+.+.-|..+...+- +..++..++++..-|. +|.+
T Consensus 166 ~~i~e~~ap~t~vi~v~~t~~nS~llt~D~~Gs--f~~l 202 (1206)
T KOG2079|consen 166 KVITEHGAPVTGVIFVGRTSQNSKLLTSDTGGS--FWKL 202 (1206)
T ss_pred eeeeecCCccceEEEEEEeCCCcEEEEccCCCc--eEEE
Confidence 45555666655543 3444557777766665 5654
No 354
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=94.92 E-value=3.1 Score=38.50 Aligned_cols=84 Identities=12% Similarity=0.101 Sum_probs=45.8
Q ss_pred CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCC-CcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCC
Q 036314 54 GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKD-QTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGN 132 (347)
Q Consensus 54 ~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~D-g~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~ 132 (347)
|...+.+..-...+..-.|+++.. ...++.-.... ..+.+++++.++. ..+..+.++.. .-+|+|||+
T Consensus 182 g~~~~~l~~~~~~~~~p~ws~~~~-~~~y~~f~~~~~~~i~~~~l~~g~~-------~~i~~~~g~~~---~P~fspDG~ 250 (425)
T COG0823 182 GYNQQKLTDSGSLILTPAWSPDGK-KLAYVSFELGGCPRIYYLDLNTGKR-------PVILNFNGNNG---APAFSPDGS 250 (425)
T ss_pred CcceeEecccCcceeccccCcCCC-ceEEEEEecCCCceEEEEeccCCcc-------ceeeccCCccC---CccCCCCCC
Confidence 444444544445555666776443 22222111222 4588888876642 12222344433 347999997
Q ss_pred EE-EEeeCCCcEEEEec
Q 036314 133 MV-CSGSWDCTISLWRT 148 (347)
Q Consensus 133 ~l-~sgs~Dg~I~iwd~ 148 (347)
.| ++...|+...||-+
T Consensus 251 ~l~f~~~rdg~~~iy~~ 267 (425)
T COG0823 251 KLAFSSSRDGSPDIYLM 267 (425)
T ss_pred EEEEEECCCCCccEEEE
Confidence 55 57888888777744
No 355
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=94.90 E-value=3.1 Score=38.38 Aligned_cols=29 Identities=21% Similarity=0.398 Sum_probs=26.0
Q ss_pred cceEEEEeCCCCeEEEEecCCcEEEEECC
Q 036314 187 QCVSSVVWPQQETIYSASWDHSVRTWDVE 215 (347)
Q Consensus 187 ~~v~~~~~~~~~~l~s~s~dg~v~vwd~~ 215 (347)
+.+.++.|.+.+.|+....||++++||+.
T Consensus 81 ~~iv~~~wt~~e~LvvV~~dG~v~vy~~~ 109 (410)
T PF04841_consen 81 GRIVGMGWTDDEELVVVQSDGTVRVYDLF 109 (410)
T ss_pred CCEEEEEECCCCeEEEEEcCCEEEEEeCC
Confidence 67888999888889999999999999986
No 356
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=94.87 E-value=2.6 Score=37.37 Aligned_cols=112 Identities=11% Similarity=0.180 Sum_probs=65.3
Q ss_pred ccceEEEEeCCCCeEEEEecCCcEEEEECCCCc-eeeeeeeCe--eeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCC
Q 036314 186 TQCVSSVVWPQQETIYSASWDHSVRTWDVEMGK-DLSDIFCGK--ALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTS 262 (347)
Q Consensus 186 ~~~v~~~~~~~~~~l~s~s~dg~v~vwd~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~ 262 (347)
.++|.++..-. ++|+. +.++.|.+|++...+ ....-.... .+.++... + .+++.|..-..+.++..+.....
T Consensus 88 ~g~V~ai~~~~-~~lv~-~~g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~--~-~~I~vgD~~~sv~~~~~~~~~~~ 162 (321)
T PF03178_consen 88 KGPVTAICSFN-GRLVV-AVGNKLYVYDLDNSKTLLKKAFYDSPFYITSLSVF--K-NYILVGDAMKSVSLLRYDEENNK 162 (321)
T ss_dssp SS-EEEEEEET-TEEEE-EETTEEEEEEEETTSSEEEEEEE-BSSSEEEEEEE--T-TEEEEEESSSSEEEEEEETTTE-
T ss_pred cCcceEhhhhC-CEEEE-eecCEEEEEEccCcccchhhheecceEEEEEEecc--c-cEEEEEEcccCEEEEEEEccCCE
Confidence 46788887333 34443 346889999998776 333333322 34444443 2 36777877777887743321111
Q ss_pred CCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcC
Q 036314 263 APVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLR 303 (347)
Q Consensus 263 ~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~ 303 (347)
.....-.....++.++.|-+++. .++.+..+|.+.++...
T Consensus 163 l~~va~d~~~~~v~~~~~l~d~~-~~i~~D~~gnl~~l~~~ 202 (321)
T PF03178_consen 163 LILVARDYQPRWVTAAEFLVDED-TIIVGDKDGNLFVLRYN 202 (321)
T ss_dssp EEEEEEESS-BEEEEEEEE-SSS-EEEEEETTSEEEEEEE-
T ss_pred EEEEEecCCCccEEEEEEecCCc-EEEEEcCCCeEEEEEEC
Confidence 11112223455688888886664 68999999999999876
No 357
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=94.67 E-value=0.16 Score=30.74 Aligned_cols=32 Identities=22% Similarity=0.323 Sum_probs=27.4
Q ss_pred CCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCc
Q 036314 273 SWISACKWHNKSWFHLISASYDGKVMLWDLRTAW 306 (347)
Q Consensus 273 ~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~ 306 (347)
..|..+.|+|... +||.++.||.|.++.+ +++
T Consensus 12 ~~v~~~~w~P~md-LiA~~t~~g~v~v~Rl-~~q 43 (47)
T PF12894_consen 12 SRVSCMSWCPTMD-LIALGTEDGEVLVYRL-NWQ 43 (47)
T ss_pred CcEEEEEECCCCC-EEEEEECCCeEEEEEC-CCc
Confidence 4588999999986 7999999999999998 444
No 358
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=94.41 E-value=2.5 Score=37.51 Aligned_cols=130 Identities=15% Similarity=0.133 Sum_probs=76.6
Q ss_pred CcEEEEECCCC----ceee---eeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEE
Q 036314 207 HSVRTWDVEMG----KDLS---DIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACK 279 (347)
Q Consensus 207 g~v~vwd~~~~----~~~~---~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~ 279 (347)
|.|.++++... ..+. ......++.++..- ++.++++. +++|.+|++.......+...+. ..-.+.++.
T Consensus 62 Gri~v~~i~~~~~~~~~l~~i~~~~~~g~V~ai~~~--~~~lv~~~--g~~l~v~~l~~~~~l~~~~~~~-~~~~i~sl~ 136 (321)
T PF03178_consen 62 GRILVFEISESPENNFKLKLIHSTEVKGPVTAICSF--NGRLVVAV--GNKLYVYDLDNSKTLLKKAFYD-SPFYITSLS 136 (321)
T ss_dssp EEEEEEEECSS-----EEEEEEEEEESS-EEEEEEE--TTEEEEEE--TTEEEEEEEETTSSEEEEEEE--BSSSEEEEE
T ss_pred cEEEEEEEEcccccceEEEEEEEEeecCcceEhhhh--CCEEEEee--cCEEEEEEccCcccchhhheec-ceEEEEEEe
Confidence 67777877663 1222 22234566666653 44444443 5899999987543122222222 223677777
Q ss_pred eCCCCCeEEEEEeCCCcEEEEEcCC-Cccceee--cCCCCeEEEEeec-CCCEEEEccCCceEEEeecc
Q 036314 280 WHNKSWFHLISASYDGKVMLWDLRT-AWPLSVI--DSHKDKVLCADWW-RGDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 280 ~s~~~~~~l~s~s~D~~i~lwd~~~-~~~~~~~--~~h~~~v~~~~~~-~~~~l~s~s~D~~v~vw~~~ 344 (347)
...+ +++.|..-..+.++.++. +..+..+ ....-.++++.|- +++.++.+..+|+|.+.+-+
T Consensus 137 ~~~~---~I~vgD~~~sv~~~~~~~~~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~ 202 (321)
T PF03178_consen 137 VFKN---YILVGDAMKSVSLLRYDEENNKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYN 202 (321)
T ss_dssp EETT---EEEEEESSSSEEEEEEETTTE-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-
T ss_pred cccc---EEEEEEcccCEEEEEEEccCCEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEEC
Confidence 6533 588888888888875543 2223322 2234567888885 66689999999999998765
No 359
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=94.31 E-value=0.24 Score=29.06 Aligned_cols=32 Identities=25% Similarity=0.317 Sum_probs=25.7
Q ss_pred CeeEEEeCCCCC--eEEEEEeCCCcEEEEEcCCC
Q 036314 274 WISACKWHNKSW--FHLISASYDGKVMLWDLRTA 305 (347)
Q Consensus 274 ~v~~v~~s~~~~--~~l~s~s~D~~i~lwd~~~~ 305 (347)
.|.+++|+|... .+|+-+-.-+.|.|+|++++
T Consensus 2 AvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~~ 35 (43)
T PF10313_consen 2 AVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRSN 35 (43)
T ss_pred CeEEEEeCCCCCcccEEEEEccCCeEEEEEcccC
Confidence 578999998664 56777777799999999963
No 360
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=93.83 E-value=1.2 Score=41.16 Aligned_cols=121 Identities=13% Similarity=0.150 Sum_probs=70.0
Q ss_pred cEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEE--eCCCCCCCCCeEEecCCCCCeeEEEeCCCCC
Q 036314 208 SVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIW--DPRKPGTSAPVFQFSSHNSWISACKWHNKSW 285 (347)
Q Consensus 208 ~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iw--d~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~ 285 (347)
.+.++|++++.....+........-.|+|++..++.+...|+...|| |+..... ..+..-.+.-..=.|+|||.
T Consensus 219 ~i~~~~l~~g~~~~i~~~~g~~~~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~~----~~Lt~~~gi~~~Ps~spdG~ 294 (425)
T COG0823 219 RIYYLDLNTGKRPVILNFNGNNGAPAFSPDGSKLAFSSSRDGSPDIYLMDLDGKNL----PRLTNGFGINTSPSWSPDGS 294 (425)
T ss_pred eEEEEeccCCccceeeccCCccCCccCCCCCCEEEEEECCCCCccEEEEcCCCCcc----eecccCCccccCccCCCCCC
Confidence 48888998887655544433344557778887777777777765555 6554321 12222222222456899999
Q ss_pred eEEEEEeCCCcEEEE--EcCCCccceeecCCCCeEEEEeecC-CCEEEEcc
Q 036314 286 FHLISASYDGKVMLW--DLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGG 333 (347)
Q Consensus 286 ~~l~s~s~D~~i~lw--d~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~s 333 (347)
+.+.+.+..|.=.|| |++.... ..+.-..+.-..-.|+| |++|+-.+
T Consensus 295 ~ivf~Sdr~G~p~I~~~~~~g~~~-~riT~~~~~~~~p~~SpdG~~i~~~~ 344 (425)
T COG0823 295 KIVFTSDRGGRPQIYLYDLEGSQV-TRLTFSGGGNSNPVWSPDGDKIVFES 344 (425)
T ss_pred EEEEEeCCCCCcceEEECCCCCce-eEeeccCCCCcCccCCCCCCEEEEEe
Confidence 877777777765555 5554433 33332222222556764 77766555
No 361
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=93.54 E-value=4.4 Score=34.87 Aligned_cols=132 Identities=13% Similarity=0.111 Sum_probs=71.3
Q ss_pred CCCeEEEEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeE---------
Q 036314 196 QQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVF--------- 266 (347)
Q Consensus 196 ~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~--------- 266 (347)
.++.|+.|..+| +.++++........+.....+..+..-+.-..+++- .|+.++++++..........
T Consensus 6 ~~~~L~vGt~~G-l~~~~~~~~~~~~~i~~~~~I~ql~vl~~~~~llvL--sd~~l~~~~L~~l~~~~~~~~~~~~~~~~ 82 (275)
T PF00780_consen 6 WGDRLLVGTEDG-LYVYDLSDPSKPTRILKLSSITQLSVLPELNLLLVL--SDGQLYVYDLDSLEPVSTSAPLAFPKSRS 82 (275)
T ss_pred CCCEEEEEECCC-EEEEEecCCccceeEeecceEEEEEEecccCEEEEE--cCCccEEEEchhhcccccccccccccccc
Confidence 467888888888 889988443333333333346666665554444444 35999999986432211000
Q ss_pred --EecCCCCCeeEEE--eCCCCCeEEEEEeCCCcEEEEEcCCC-----ccceeecCCCCeEEEEeecCCCEEEEcc
Q 036314 267 --QFSSHNSWISACK--WHNKSWFHLISASYDGKVMLWDLRTA-----WPLSVIDSHKDKVLCADWWRGDSVISGG 333 (347)
Q Consensus 267 --~~~~h~~~v~~v~--~s~~~~~~l~s~s~D~~i~lwd~~~~-----~~~~~~~~h~~~v~~~~~~~~~~l~s~s 333 (347)
..-.....+..++ -...+...|+. ....+|.+|.+... ...+.+.- .+.+.++.|. ++.|+-|.
T Consensus 83 ~~~~~~~~~~v~~f~~~~~~~~~~~L~v-a~kk~i~i~~~~~~~~~f~~~~ke~~l-p~~~~~i~~~-~~~i~v~~ 155 (275)
T PF00780_consen 83 LPTKLPETKGVSFFAVNGGHEGSRRLCV-AVKKKILIYEWNDPRNSFSKLLKEISL-PDPPSSIAFL-GNKICVGT 155 (275)
T ss_pred ccccccccCCeeEEeeccccccceEEEE-EECCEEEEEEEECCcccccceeEEEEc-CCCcEEEEEe-CCEEEEEe
Confidence 0011222344444 12333344444 44459999988763 23344432 4677888887 33444443
No 362
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=93.52 E-value=5.9 Score=36.30 Aligned_cols=77 Identities=17% Similarity=0.198 Sum_probs=53.2
Q ss_pred CcCCceeeccCCCCCEEEEEecCCeEEEEcCCCeEEE---Eeec------cCCceEEEEEee----cCCCceEEEEEccC
Q 036314 22 LHDDWVSAVDGSNPGFILTGCYDNLGRVWKAGGVCTH---ILEG------HCGAVSSVNIIK----SDGLKYVTVATASK 88 (347)
Q Consensus 22 ~h~~~v~~~~~~~~~~l~sg~~d~~i~iw~~~~~~~~---~l~~------h~~~V~~v~~~~----~~~~~~~~l~s~s~ 88 (347)
...+.|++++.|+=+++|.|..+|.+.|-|.+|..+- .+.. ....|+++.|.- +++...-.|+.|.+
T Consensus 84 ~~~g~vtal~~S~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vGTn 163 (395)
T PF08596_consen 84 AKQGPVTALKNSDIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVGTN 163 (395)
T ss_dssp --S-SEEEEEE-BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEEET
T ss_pred ccCCcEeEEecCCCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEEEeC
Confidence 3479999999998899999999999999999875432 2222 223477777752 23333457888999
Q ss_pred CCcEEEEecc
Q 036314 89 DQTLRLWKFD 98 (347)
Q Consensus 89 Dg~v~~wd~~ 98 (347)
.|++.+|.+.
T Consensus 164 ~G~v~~fkIl 173 (395)
T PF08596_consen 164 SGNVLTFKIL 173 (395)
T ss_dssp TSEEEEEEEE
T ss_pred CCCEEEEEEe
Confidence 9999999874
No 363
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=93.49 E-value=4.5 Score=34.82 Aligned_cols=238 Identities=16% Similarity=0.141 Sum_probs=117.8
Q ss_pred CCCEEEEEecCCeEEEEcCC-C-eEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCcccc-c
Q 036314 34 NPGFILTGCYDNLGRVWKAG-G-VCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKI-R 110 (347)
Q Consensus 34 ~~~~l~sg~~d~~i~iw~~~-~-~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~-~ 110 (347)
.++.|+.|..+| +.+++.. . ...+.. +...|..+.+.++-+ .|+. =.|+++.++++..-......... .
T Consensus 6 ~~~~L~vGt~~G-l~~~~~~~~~~~~~i~--~~~~I~ql~vl~~~~----~llv-Lsd~~l~~~~L~~l~~~~~~~~~~~ 77 (275)
T PF00780_consen 6 WGDRLLVGTEDG-LYVYDLSDPSKPTRIL--KLSSITQLSVLPELN----LLLV-LSDGQLYVYDLDSLEPVSTSAPLAF 77 (275)
T ss_pred CCCEEEEEECCC-EEEEEecCCccceeEe--ecceEEEEEEecccC----EEEE-EcCCccEEEEchhhccccccccccc
Confidence 467888899999 7888762 2 222222 222388898887543 2222 23599999998754322110000 0
Q ss_pred e----eeeeeccccceEEEE--EeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccC
Q 036314 111 S----FKILRGHKASVHSIA--AETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVG 184 (347)
Q Consensus 111 ~----~~~~~~h~~~V~~v~--~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (347)
. ...-......+...+ -...+...+......+|.+|.......... ...+.+.-
T Consensus 78 ~~~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~--------------------~~~ke~~l 137 (275)
T PF00780_consen 78 PKSRSLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFS--------------------KLLKEISL 137 (275)
T ss_pred cccccccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCccccc--------------------ceeEEEEc
Confidence 0 000111233444444 123344444455555899887654211000 01112211
Q ss_pred CccceEEEEeCCCCeEEEEecCCcEEEEECCCCceeeeee--e-----------CeeeEEEEeeCCCCcEEEEecCCCcE
Q 036314 185 HTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIF--C-----------GKALNCIDIGGEGSALIAAGGSDPIL 251 (347)
Q Consensus 185 h~~~v~~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~--~-----------~~~~~~~~~~~~~~~~la~~~~d~~i 251 (347)
.+.+..+.|. ++.++.+. .+...+.|+.++....-.. . ..++..+.+ ++ +.++++ .|..-
T Consensus 138 -p~~~~~i~~~-~~~i~v~~-~~~f~~idl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~e~Ll~--~~~~g 210 (275)
T PF00780_consen 138 -PDPPSSIAFL-GNKICVGT-SKGFYLIDLNTGSPSELLDPSDSSSSFKSRNSSSKPLGIFQL-SD-NEFLLC--YDNIG 210 (275)
T ss_pred -CCCcEEEEEe-CCEEEEEe-CCceEEEecCCCCceEEeCccCCcchhhhcccCCCceEEEEe-CC-ceEEEE--ecceE
Confidence 1445667765 44555554 4458888888654322111 0 112333333 22 334443 24444
Q ss_pred EEEeCCCCCCCC-CeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCC
Q 036314 252 RIWDPRKPGTSA-PVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSH 314 (347)
Q Consensus 252 ~iwd~~~~~~~~-~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h 314 (347)
.+.|... ...+ ....+.. ...++++.. ++ |+..+. +.|.||++.+++.++++...
T Consensus 211 ~fv~~~G-~~~r~~~i~W~~---~p~~~~~~~--py-li~~~~-~~iEV~~~~~~~lvQ~i~~~ 266 (275)
T PF00780_consen 211 VFVNKNG-EPSRKSTIQWSS---APQSVAYSS--PY-LIAFSS-NSIEVRSLETGELVQTIPLP 266 (275)
T ss_pred EEEcCCC-CcCcccEEEcCC---chhEEEEEC--CE-EEEECC-CEEEEEECcCCcEEEEEECC
Confidence 4455432 2211 2334432 344556543 34 555555 45999999999888887654
No 364
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=92.95 E-value=10 Score=37.32 Aligned_cols=114 Identities=13% Similarity=0.126 Sum_probs=70.0
Q ss_pred eEEEEe---CCCCeEEEEecCCcEEEEECCCC-----------c---------eeeeeeeCeeeEEEEee-CCCCcEEEE
Q 036314 189 VSSVVW---PQQETIYSASWDHSVRTWDVEMG-----------K---------DLSDIFCGKALNCIDIG-GEGSALIAA 244 (347)
Q Consensus 189 v~~~~~---~~~~~l~s~s~dg~v~vwd~~~~-----------~---------~~~~~~~~~~~~~~~~~-~~~~~~la~ 244 (347)
|+-+.. -..+.|+.+..||.|.+|.+++- . +...+..+...+.++++ ....++||+
T Consensus 103 IN~i~v~~lg~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~v~~SaWGLdIh~~~~~rlIAV 182 (717)
T PF08728_consen 103 INFIKVGDLGGEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLRVGASAWGLDIHDYKKSRLIAV 182 (717)
T ss_pred eeEEEecccCCeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEeecCCceeEEEEEecCcceEEEE
Confidence 554443 34567889999999999965210 0 01112223456677775 234568888
Q ss_pred ecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCC--C---eEEEEEeCCCcEEEEEc
Q 036314 245 GGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKS--W---FHLISASYDGKVMLWDL 302 (347)
Q Consensus 245 ~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~--~---~~l~s~s~D~~i~lwd~ 302 (347)
++....|.||-............-..|..-|.+|.|-++. . ..|++++-.|.+.+|++
T Consensus 183 SsNs~~VTVFaf~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I 245 (717)
T PF08728_consen 183 SSNSQEVTVFAFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI 245 (717)
T ss_pred ecCCceEEEEEEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence 8888889988543211100010001245568889987664 1 26888999999999888
No 365
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=92.51 E-value=8.5 Score=35.35 Aligned_cols=105 Identities=16% Similarity=0.180 Sum_probs=49.9
Q ss_pred EecCCcEEEEECCCCceeeeeeeCe---eeEEEEee--CCCCcEEEEecCCCcEEEEeCCCCCCCC--CeEEecC-----
Q 036314 203 ASWDHSVRTWDVEMGKDLSDIFCGK---ALNCIDIG--GEGSALIAAGGSDPILRIWDPRKPGTSA--PVFQFSS----- 270 (347)
Q Consensus 203 ~s~dg~v~vwd~~~~~~~~~~~~~~---~~~~~~~~--~~~~~~la~~~~d~~i~iwd~~~~~~~~--~~~~~~~----- 270 (347)
+...+++.+||+...+.+..+..+. ..-.+-|. |....-++.+...++|-.|-....+... .+.++..
T Consensus 218 ~~yG~~l~vWD~~~r~~~Q~idLg~~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~ 297 (461)
T PF05694_consen 218 GKYGHSLHVWDWSTRKLLQTIDLGEEGQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEG 297 (461)
T ss_dssp H-S--EEEEEETTTTEEEEEEES-TTEEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--S
T ss_pred ccccCeEEEEECCCCcEeeEEecCCCCCceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCc
Confidence 3456789999999988877776442 22233332 2222223333344445444221111111 1111111
Q ss_pred ------------CCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCcc
Q 036314 271 ------------HNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWP 307 (347)
Q Consensus 271 ------------h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~ 307 (347)
-..-|+++..|.|++++-+++-.+|.||.||+.....
T Consensus 298 ~~lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~W~~GdvrqYDISDP~~ 346 (461)
T PF05694_consen 298 WILPEMLKPFGAVPPLITDILISLDDRFLYVSNWLHGDVRQYDISDPFN 346 (461)
T ss_dssp S---GGGGGG-EE------EEE-TTS-EEEEEETTTTEEEEEE-SSTTS
T ss_pred ccccccccccccCCCceEeEEEccCCCEEEEEcccCCcEEEEecCCCCC
Confidence 0234788999999988788888999999999987543
No 366
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=92.46 E-value=8.7 Score=35.39 Aligned_cols=110 Identities=20% Similarity=0.284 Sum_probs=64.6
Q ss_pred CCCCeEE-EEecCC----cEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecC----------CCcEEEEeCCCC
Q 036314 195 PQQETIY-SASWDH----SVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGS----------DPILRIWDPRKP 259 (347)
Q Consensus 195 ~~~~~l~-s~s~dg----~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~----------d~~i~iwd~~~~ 259 (347)
|++++++ +.+..| +++++|+++++.+...........+.|.+++..++.+... ...|+.|.+..+
T Consensus 133 pdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v~~~~~gt~ 212 (414)
T PF02897_consen 133 PDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENPKFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQVYRHKLGTP 212 (414)
T ss_dssp TTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEEESEEEEECTTSSEEEEEECSTTTSS-CCGCCEEEEEEETTS-
T ss_pred CCCCEEEEEecCCCCceEEEEEEECCCCcCcCCcccccccceEEEeCCCCEEEEEEeCcccccccCCCCcEEEEEECCCC
Confidence 5777764 445555 4999999999766543322223347887766666665432 234778877543
Q ss_pred CCCCCeEEecCCCC--CeeEEEeCCCCCeEEEEEeCCC---cEEEEEcCCC
Q 036314 260 GTSAPVFQFSSHNS--WISACKWHNKSWFHLISASYDG---KVMLWDLRTA 305 (347)
Q Consensus 260 ~~~~~~~~~~~h~~--~v~~v~~s~~~~~~l~s~s~D~---~i~lwd~~~~ 305 (347)
. ......+..... +...+..++++.++++...... .+.+.|+..+
T Consensus 213 ~-~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~ 262 (414)
T PF02897_consen 213 Q-SEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDG 262 (414)
T ss_dssp G-GG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCT
T ss_pred h-HhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEecccc
Confidence 2 111233433322 2667889999988776665444 4777888764
No 367
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=92.43 E-value=6.2 Score=33.58 Aligned_cols=195 Identities=12% Similarity=0.136 Sum_probs=92.0
Q ss_pred CCceeeccCC-CCC-EEEEEecCCeEEEEcCCCeEEEE--eeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccc
Q 036314 24 DDWVSAVDGS-NPG-FILTGCYDNLGRVWKAGGVCTHI--LEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDA 99 (347)
Q Consensus 24 ~~~v~~~~~~-~~~-~l~sg~~d~~i~iw~~~~~~~~~--l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~ 99 (347)
.+.++.+.+. +++ +++.....+.|...+..|..++. |.+. +..-.|++..+ +.++++.-.++++.++++..
T Consensus 21 ~~e~SGLTy~pd~~tLfaV~d~~~~i~els~~G~vlr~i~l~g~-~D~EgI~y~g~----~~~vl~~Er~~~L~~~~~~~ 95 (248)
T PF06977_consen 21 LDELSGLTYNPDTGTLFAVQDEPGEIYELSLDGKVLRRIPLDGF-GDYEGITYLGN----GRYVLSEERDQRLYIFTIDD 95 (248)
T ss_dssp -S-EEEEEEETTTTEEEEEETTTTEEEEEETT--EEEEEE-SS--SSEEEEEE-ST----TEEEEEETTTTEEEEEEE--
T ss_pred cCCccccEEcCCCCeEEEEECCCCEEEEEcCCCCEEEEEeCCCC-CCceeEEEECC----CEEEEEEcCCCcEEEEEEec
Confidence 3448889876 344 56666666777777777776654 4443 44677887652 23455544588999998854
Q ss_pred cccccCccccceee--eeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccccc
Q 036314 100 EELVNHPKKIRSFK--ILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGE 177 (347)
Q Consensus 100 ~~~~~~~~~~~~~~--~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (347)
.+........+.+. ....+...+-.++|++.++.|+.+-...-.+||.+..... ........ ..
T Consensus 96 ~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~-~~~~~~~~-------------~~ 161 (248)
T PF06977_consen 96 DTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPG-GFDLFVSD-------------DQ 161 (248)
T ss_dssp --TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT--SS--EEEE--------------H
T ss_pred cccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccC-ccceeecc-------------cc
Confidence 32111111111111 1123556688999999988888777777777776643110 00000000 00
Q ss_pred ccccccCCccceEEEEe-CC-CCeEEEEecCCcEEEEECCCCceeeeeeeC----------eeeEEEEeeCCC
Q 036314 178 AISTLVGHTQCVSSVVW-PQ-QETIYSASWDHSVRTWDVEMGKDLSDIFCG----------KALNCIDIGGEG 238 (347)
Q Consensus 178 ~~~~~~~h~~~v~~~~~-~~-~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~----------~~~~~~~~~~~~ 238 (347)
.+.........+.++++ |. ++.++-....+.|..+| ..|+.+..+... .....+++.+++
T Consensus 162 ~~~~~~~~~~d~S~l~~~p~t~~lliLS~es~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G 233 (248)
T PF06977_consen 162 DLDDDKLFVRDLSGLSYDPRTGHLLILSDESRLLLELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDG 233 (248)
T ss_dssp HHH-HT--SS---EEEEETTTTEEEEEETTTTEEEEE--TT--EEEEEE-STTGGG-SS---SEEEEEE-TT-
T ss_pred ccccccceeccccceEEcCCCCeEEEEECCCCeEEEEC-CCCCEEEEEEeCCcccCcccccCCccEEEECCCC
Confidence 00001112233566666 33 44556666777788888 566655544321 135667776543
No 368
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=92.03 E-value=7.8 Score=33.87 Aligned_cols=61 Identities=11% Similarity=0.143 Sum_probs=40.9
Q ss_pred EeeccCCceEEEEEeecCCCceEEEEEc-----cCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCE
Q 036314 59 ILEGHCGAVSSVNIIKSDGLKYVTVATA-----SKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNM 133 (347)
Q Consensus 59 ~l~~h~~~V~~v~~~~~~~~~~~~l~s~-----s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~ 133 (347)
.|.|| -.|++++. .|++. +..|.|-+||...+ .+.+..+..|.-.-+.+.+.|||+.
T Consensus 51 HFyGH------g~fs~dG~----~LytTEnd~~~g~G~IgVyd~~~~--------~~ri~E~~s~GIGPHel~l~pDG~t 112 (305)
T PF07433_consen 51 HFYGH------GVFSPDGR----LLYTTENDYETGRGVIGVYDAARG--------YRRIGEFPSHGIGPHELLLMPDGET 112 (305)
T ss_pred EEecC------EEEcCCCC----EEEEeccccCCCcEEEEEEECcCC--------cEEEeEecCCCcChhhEEEcCCCCE
Confidence 45566 45777443 45554 34578999998722 2345567777777788999999977
Q ss_pred EEEe
Q 036314 134 VCSG 137 (347)
Q Consensus 134 l~sg 137 (347)
|+.+
T Consensus 113 LvVA 116 (305)
T PF07433_consen 113 LVVA 116 (305)
T ss_pred EEEE
Confidence 7654
No 369
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=91.87 E-value=7.3 Score=33.16 Aligned_cols=200 Identities=13% Similarity=0.161 Sum_probs=102.2
Q ss_pred EEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEe
Q 036314 58 HILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSG 137 (347)
Q Consensus 58 ~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sg 137 (347)
+.+.+-...++.|++.|+.+ ..++.....+.|-..+.+ ++++. . -.+.+. +-.-.|++..++.++++.
T Consensus 15 ~~l~g~~~e~SGLTy~pd~~---tLfaV~d~~~~i~els~~-G~vlr------~-i~l~g~-~D~EgI~y~g~~~~vl~~ 82 (248)
T PF06977_consen 15 KPLPGILDELSGLTYNPDTG---TLFAVQDEPGEIYELSLD-GKVLR------R-IPLDGF-GDYEGITYLGNGRYVLSE 82 (248)
T ss_dssp EE-TT--S-EEEEEEETTTT---EEEEEETTTTEEEEEETT---EEE------E-EE-SS--SSEEEEEE-STTEEEEEE
T ss_pred eECCCccCCccccEEcCCCC---eEEEEECCCCEEEEEcCC-CCEEE------E-EeCCCC-CCceeEEEECCCEEEEEE
Confidence 35666677799999998644 356677777777777754 33221 1 123443 335678888888888877
Q ss_pred eCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCC
Q 036314 138 SWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEM 216 (347)
Q Consensus 138 s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~ 216 (347)
-+++.+.++++......-...... .-.+.....++..+-.++| +.++.|+.+-...-.++|.+..
T Consensus 83 Er~~~L~~~~~~~~~~~~~~~~~~--------------~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~ 148 (248)
T PF06977_consen 83 ERDQRLYIFTIDDDTTSLDRADVQ--------------KISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNG 148 (248)
T ss_dssp TTTTEEEEEEE----TT--EEEEE--------------EEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEES
T ss_pred cCCCcEEEEEEeccccccchhhce--------------EEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEcc
Confidence 679999999875421110000000 0001111234556788999 5567777777777777877654
Q ss_pred ---Cceeeee-----e----eCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCC-------CCeeE
Q 036314 217 ---GKDLSDI-----F----CGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHN-------SWISA 277 (347)
Q Consensus 217 ---~~~~~~~-----~----~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~-------~~v~~ 277 (347)
+..+... . .-..+..+.++|..+++++-...+..|..+|.. +.......+.... ..--.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~d~S~l~~~p~t~~lliLS~es~~l~~~d~~--G~~~~~~~L~~g~~gl~~~~~QpEG 226 (248)
T PF06977_consen 149 FPGGFDLFVSDDQDLDDDKLFVRDLSGLSYDPRTGHLLILSDESRLLLELDRQ--GRVVSSLSLDRGFHGLSKDIPQPEG 226 (248)
T ss_dssp TT-SS--EEEE-HHHH-HT--SS---EEEEETTTTEEEEEETTTTEEEEE-TT----EEEEEE-STTGGG-SS---SEEE
T ss_pred ccCccceeeccccccccccceeccccceEEcCCCCeEEEEECCCCeEEEECCC--CCEEEEEEeCCcccCcccccCCccE
Confidence 2221111 0 112456788888888888888889999999954 2222233333211 12455
Q ss_pred EEeCCCCC
Q 036314 278 CKWHNKSW 285 (347)
Q Consensus 278 v~~s~~~~ 285 (347)
++|.++|.
T Consensus 227 Ia~d~~G~ 234 (248)
T PF06977_consen 227 IAFDPDGN 234 (248)
T ss_dssp EEE-TT--
T ss_pred EEECCCCC
Confidence 78888774
No 370
>PRK13616 lipoprotein LpqB; Provisional
Probab=91.81 E-value=7.1 Score=37.90 Aligned_cols=69 Identities=23% Similarity=0.230 Sum_probs=40.6
Q ss_pred CCCeeEEEeCCCCCeEEEEEeCCCcEEE---EEcCCCcc-c---eeec-CCCCeEEEEeecCCCEEEEccCCceEEEee
Q 036314 272 NSWISACKWHNKSWFHLISASYDGKVML---WDLRTAWP-L---SVID-SHKDKVLCADWWRGDSVISGGVDSKLCVSS 342 (347)
Q Consensus 272 ~~~v~~v~~s~~~~~~l~s~s~D~~i~l---wd~~~~~~-~---~~~~-~h~~~v~~~~~~~~~~l~s~s~D~~v~vw~ 342 (347)
...|.++.|||||.+.++.. ++.|.+ -....|+. + ..+. +-.+.+..++|.++..|+.+..++.-.+|.
T Consensus 447 ~g~Issl~wSpDG~RiA~i~--~g~v~Va~Vvr~~~G~~~l~~~~~l~~~l~~~~~~l~W~~~~~L~V~~~~~~~~v~~ 523 (591)
T PRK13616 447 PGPISELQLSRDGVRAAMII--GGKVYLAVVEQTEDGQYALTNPREVGPGLGDTAVSLDWRTGDSLVVGRSDPEHPVWY 523 (591)
T ss_pred CCCcCeEEECCCCCEEEEEE--CCEEEEEEEEeCCCCceeecccEEeecccCCccccceEecCCEEEEEecCCCCceEE
Confidence 45699999999998644433 467777 34334431 1 1122 222346788998766666555555555565
No 371
>KOG2395 consensus Protein involved in vacuole import and degradation [Intracellular trafficking, secretion, and vesicular transport]
Probab=91.74 E-value=2.5 Score=39.35 Aligned_cols=94 Identities=15% Similarity=0.155 Sum_probs=60.5
Q ss_pred EEecCCcEEEEECCCCce--eeeee-----eCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCC
Q 036314 202 SASWDHSVRTWDVEMGKD--LSDIF-----CGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSW 274 (347)
Q Consensus 202 s~s~dg~v~vwd~~~~~~--~~~~~-----~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~ 274 (347)
.|-.|+.|--||.+-... +.-.+ ......|.+-..+ -.|++|+.+|.||+||.-. . .....+++-.+.
T Consensus 399 vGLs~n~vfriDpRv~~~~kl~~~q~kqy~~k~nFsc~aTT~s--G~IvvgS~~GdIRLYdri~--~-~AKTAlPgLG~~ 473 (644)
T KOG2395|consen 399 VGLSDNSVFRIDPRVQGKNKLAVVQSKQYSTKNNFSCFATTES--GYIVVGSLKGDIRLYDRIG--R-RAKTALPGLGDA 473 (644)
T ss_pred EeecCCceEEecccccCcceeeeeeccccccccccceeeecCC--ceEEEeecCCcEEeehhhh--h-hhhhcccccCCc
Confidence 455677788899874221 11111 1234566665443 3688999999999999521 1 223467788888
Q ss_pred eeEEEeCCCCCeEEEEEeCCCcEEEEEc
Q 036314 275 ISACKWHNKSWFHLISASYDGKVMLWDL 302 (347)
Q Consensus 275 v~~v~~s~~~~~~l~s~s~D~~i~lwd~ 302 (347)
|.-|..+.+|.+.|+|| +..+.|.|.
T Consensus 474 I~hVdvtadGKwil~Tc--~tyLlLi~t 499 (644)
T KOG2395|consen 474 IKHVDVTADGKWILATC--KTYLLLIDT 499 (644)
T ss_pred eeeEEeeccCcEEEEec--ccEEEEEEE
Confidence 98899999998755554 346667664
No 372
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=91.63 E-value=11 Score=34.55 Aligned_cols=160 Identities=15% Similarity=0.142 Sum_probs=96.5
Q ss_pred EEEEEeCCCC-EEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CCCCeE
Q 036314 123 HSIAAETSGN-MVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETI 200 (347)
Q Consensus 123 ~~v~~s~~~~-~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l 200 (347)
..+++++.+. ..+....+..|.+.|........ ....+. .-..+++ ++++.+
T Consensus 77 ~~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~~------------------------~~~vG~--~P~~~~~~~~~~~v 130 (381)
T COG3391 77 AGVAVNPAGNKVYVTTGDSNTVSVIDTATNTVLG------------------------SIPVGL--GPVGLAVDPDGKYV 130 (381)
T ss_pred cceeeCCCCCeEEEecCCCCeEEEEcCcccceee------------------------Eeeecc--CCceEEECCCCCEE
Confidence 4567788887 44555556899999854321100 000111 1233444 566666
Q ss_pred EEEec---CCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCC--CCeEEecCCCCCe
Q 036314 201 YSASW---DHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTS--APVFQFSSHNSWI 275 (347)
Q Consensus 201 ~s~s~---dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~--~~~~~~~~h~~~v 275 (347)
+.+.. ++++.+.|..+.+.+.....+.....+++.+.+....++-..++.|.++|....... ....... -...-
T Consensus 131 YV~n~~~~~~~vsvid~~t~~~~~~~~vG~~P~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~~~~~~~~~-~~~~P 209 (381)
T COG3391 131 YVANAGNGNNTVSVIDAATNKVTATIPVGNTPTGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVRGSVGSLVG-VGTGP 209 (381)
T ss_pred EEEecccCCceEEEEeCCCCeEEEEEecCCCcceEEECCCCCeEEEEecCCCeEEEEeCCCcceeccccccccc-cCCCC
Confidence 55544 688999999888887776555434778887777767777778999999996532110 0000111 12223
Q ss_pred eEEEeCCCCCeEEEEEeCC--CcEEEEEcCCCccce
Q 036314 276 SACKWHNKSWFHLISASYD--GKVMLWDLRTAWPLS 309 (347)
Q Consensus 276 ~~v~~s~~~~~~l~s~s~D--~~i~lwd~~~~~~~~ 309 (347)
..+.++|++.+..++-..+ +++...|..++....
T Consensus 210 ~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v~~ 245 (381)
T COG3391 210 AGIAVDPDGNRVYVANDGSGSNNVLKIDTATGNVTA 245 (381)
T ss_pred ceEEECCCCCEEEEEeccCCCceEEEEeCCCceEEE
Confidence 4578899987655544444 688888888765444
No 373
>PRK13616 lipoprotein LpqB; Provisional
Probab=90.83 E-value=17 Score=35.40 Aligned_cols=109 Identities=8% Similarity=0.059 Sum_probs=54.2
Q ss_pred CeeeEEEEeeCCCCcEEEEecCCCcEEE---EeCCCCC-CCCCeEEecC-CCCCeeEEEeCCCCCeEEEEEeCCCcEEEE
Q 036314 226 GKALNCIDIGGEGSALIAAGGSDPILRI---WDPRKPG-TSAPVFQFSS-HNSWISACKWHNKSWFHLISASYDGKVMLW 300 (347)
Q Consensus 226 ~~~~~~~~~~~~~~~~la~~~~d~~i~i---wd~~~~~-~~~~~~~~~~-h~~~v~~v~~s~~~~~~l~s~s~D~~i~lw 300 (347)
...+..+.+++++.++++.. ++.|.+ -....+. .......+.. -...+.++.|.+++. |+.+..++...+|
T Consensus 447 ~g~Issl~wSpDG~RiA~i~--~g~v~Va~Vvr~~~G~~~l~~~~~l~~~l~~~~~~l~W~~~~~--L~V~~~~~~~~v~ 522 (591)
T PRK13616 447 PGPISELQLSRDGVRAAMII--GGKVYLAVVEQTEDGQYALTNPREVGPGLGDTAVSLDWRTGDS--LVVGRSDPEHPVW 522 (591)
T ss_pred CCCcCeEEECCCCCEEEEEE--CCEEEEEEEEeCCCCceeecccEEeecccCCccccceEecCCE--EEEEecCCCCceE
Confidence 34578889987766554443 467776 3322111 0001112222 233357899998874 4455544444455
Q ss_pred E--cCCCccceeecC--CCCeEEEEeecCCCEEEEccCCceEEE
Q 036314 301 D--LRTAWPLSVIDS--HKDKVLCADWWRGDSVISGGVDSKLCV 340 (347)
Q Consensus 301 d--~~~~~~~~~~~~--h~~~v~~~~~~~~~~l~s~s~D~~v~v 340 (347)
. +.. .....+.+ ....+..++=+++..+++ ..++.+.+
T Consensus 523 ~v~vDG-~~~~~~~~~n~~~~v~~vaa~~~~iyv~-~~~g~~~l 564 (591)
T PRK13616 523 YVNLDG-SNSDALPSRNLSAPVVAVAASPSTVYVT-DARAVLQL 564 (591)
T ss_pred EEecCC-ccccccCCCCccCceEEEecCCceEEEE-cCCceEEe
Confidence 4 442 22222222 245666666555544443 55555444
No 374
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=90.78 E-value=13 Score=33.99 Aligned_cols=200 Identities=15% Similarity=0.136 Sum_probs=111.4
Q ss_pred EEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeC---CCcEEE
Q 036314 69 SVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSW---DCTISL 145 (347)
Q Consensus 69 ~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~---Dg~I~i 145 (347)
.+++.+.+. ...++...++.|.+.|....+... ....+. ....++++++++.++.+.. ++++.+
T Consensus 78 ~i~v~~~~~---~vyv~~~~~~~v~vid~~~~~~~~--------~~~vG~--~P~~~~~~~~~~~vYV~n~~~~~~~vsv 144 (381)
T COG3391 78 GVAVNPAGN---KVYVTTGDSNTVSVIDTATNTVLG--------SIPVGL--GPVGLAVDPDGKYVYVANAGNGNNTVSV 144 (381)
T ss_pred ceeeCCCCC---eEEEecCCCCeEEEEcCcccceee--------Eeeecc--CCceEEECCCCCEEEEEecccCCceEEE
Confidence 455555433 245566667899999966543211 111222 3467899999977765544 677877
Q ss_pred EecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CCCCeEEEE-ecCCcEEEEECCCCceee--
Q 036314 146 WRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSA-SWDHSVRTWDVEMGKDLS-- 221 (347)
Q Consensus 146 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~-s~dg~v~vwd~~~~~~~~-- 221 (347)
.|..+..... ....+- .+ ..+++ |+++.++.+ ..++++.+.|........
T Consensus 145 id~~t~~~~~------------------------~~~vG~-~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~~~ 198 (381)
T COG3391 145 IDAATNKVTA------------------------TIPVGN-TP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVRGS 198 (381)
T ss_pred EeCCCCeEEE------------------------EEecCC-Cc-ceEEECCCCCeEEEEecCCCeEEEEeCCCcceeccc
Confidence 7765432110 001111 12 34454 677765544 478899999976654432
Q ss_pred ---eeeeCeeeEEEEeeCCCCcEEEEecCC--CcEEEEeCCCCCCCCCeEEe--cCCCCCeeEEEeCCCCCeEEEEEeCC
Q 036314 222 ---DIFCGKALNCIDIGGEGSALIAAGGSD--PILRIWDPRKPGTSAPVFQF--SSHNSWISACKWHNKSWFHLISASYD 294 (347)
Q Consensus 222 ---~~~~~~~~~~~~~~~~~~~~la~~~~d--~~i~iwd~~~~~~~~~~~~~--~~h~~~v~~v~~s~~~~~~l~s~s~D 294 (347)
..........+.+.+++....++...+ +.+...|..... .... ......-..+..+|++...-+.-+..
T Consensus 199 ~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~----v~~~~~~~~~~~~~~v~~~p~g~~~yv~~~~~ 274 (381)
T COG3391 199 VGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGN----VTATDLPVGSGAPRGVAVDPAGKAAYVANSQG 274 (381)
T ss_pred cccccccCCCCceEEECCCCCEEEEEeccCCCceEEEEeCCCce----EEEeccccccCCCCceeECCCCCEEEEEecCC
Confidence 122223344566766666555554444 688888876421 1111 11111334578899987643333556
Q ss_pred CcEEEEEcCCCccceee
Q 036314 295 GKVMLWDLRTAWPLSVI 311 (347)
Q Consensus 295 ~~i~lwd~~~~~~~~~~ 311 (347)
+.+.+.|..+.......
T Consensus 275 ~~V~vid~~~~~v~~~~ 291 (381)
T COG3391 275 GTVSVIDGATDRVVKTG 291 (381)
T ss_pred CeEEEEeCCCCceeeee
Confidence 88999998876655543
No 375
>PHA03098 kelch-like protein; Provisional
Probab=90.76 E-value=16 Score=35.04 Aligned_cols=104 Identities=11% Similarity=0.142 Sum_probs=46.6
Q ss_pred CCCeEEEEecC------CcEEEEECCCCceeee--eeeCeeeEEEEeeCCCCcEEEEecCC--------CcEEEEeCCCC
Q 036314 196 QQETIYSASWD------HSVRTWDVEMGKDLSD--IFCGKALNCIDIGGEGSALIAAGGSD--------PILRIWDPRKP 259 (347)
Q Consensus 196 ~~~~l~s~s~d------g~v~vwd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~la~~~~d--------~~i~iwd~~~~ 259 (347)
++..++.|+.+ +.+..||..+.+.... +.......+... .++.+++.||.+ ..+..||+...
T Consensus 389 ~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~ 466 (534)
T PHA03098 389 NNLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPISHYGGCAIY--HDGKIYVIGGISYIDNIKVYNIVESYNPVTN 466 (534)
T ss_pred CCEEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCccccCceEEE--ECCEEEEECCccCCCCCcccceEEEecCCCC
Confidence 44445555532 3577899877654321 111111111222 234566667643 23888887642
Q ss_pred CCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCC-----CcEEEEEcCCC
Q 036314 260 GTSAPVFQFSSHNSWISACKWHNKSWFHLISASYD-----GKVMLWDLRTA 305 (347)
Q Consensus 260 ~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D-----~~i~lwd~~~~ 305 (347)
....+..+.........+.+ ++ .+++.|+.+ ..+.++|.++.
T Consensus 467 -~W~~~~~~~~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~v~~yd~~~~ 513 (534)
T PHA03098 467 -KWTELSSLNFPRINASLCIF--NN-KIYVVGGDKYEYYINEIEVYDDKTN 513 (534)
T ss_pred -ceeeCCCCCcccccceEEEE--CC-EEEEEcCCcCCcccceeEEEeCCCC
Confidence 11111111111111222333 33 345556543 46777877654
No 376
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=90.62 E-value=8 Score=34.11 Aligned_cols=94 Identities=10% Similarity=0.201 Sum_probs=54.9
Q ss_pred cCCCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCC
Q 036314 51 KAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETS 130 (347)
Q Consensus 51 ~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~ 130 (347)
++.+..++.+.+|-..-+.|+|+|++. .+.++=+..+.|..|++...+... ... +....+..+.+..-.++...+
T Consensus 149 ~p~g~~~~l~~~~~~~~NGla~SpDg~---tly~aDT~~~~i~r~~~d~~~g~~-~~~-~~~~~~~~~~G~PDG~~vDad 223 (307)
T COG3386 149 DPDGGVVRLLDDDLTIPNGLAFSPDGK---TLYVADTPANRIHRYDLDPATGPI-GGR-RGFVDFDEEPGLPDGMAVDAD 223 (307)
T ss_pred cCCCCEEEeecCcEEecCceEECCCCC---EEEEEeCCCCeEEEEecCcccCcc-CCc-ceEEEccCCCCCCCceEEeCC
Confidence 444566666777655567899999653 355666777888888876311110 011 112222223344445667778
Q ss_pred CCEEEEeeCCC-cEEEEecC
Q 036314 131 GNMVCSGSWDC-TISLWRTN 149 (347)
Q Consensus 131 ~~~l~sgs~Dg-~I~iwd~~ 149 (347)
|.+.+++-.+| .|.+|+..
T Consensus 224 G~lw~~a~~~g~~v~~~~pd 243 (307)
T COG3386 224 GNLWVAAVWGGGRVVRFNPD 243 (307)
T ss_pred CCEEEecccCCceEEEECCC
Confidence 88776555554 78888654
No 377
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=90.46 E-value=6.5 Score=38.15 Aligned_cols=107 Identities=7% Similarity=0.070 Sum_probs=64.5
Q ss_pred EEEEEecC-CeEEEEcCCCeEE---EEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCcccccee
Q 036314 37 FILTGCYD-NLGRVWKAGGVCT---HILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSF 112 (347)
Q Consensus 37 ~l~sg~~d-~~i~iw~~~~~~~---~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~ 112 (347)
.+|....+ .++.|||..+... ..| ...+.|..++|..-. ++..+++-+..+.|.++.-..-........+.++
T Consensus 42 k~a~V~~~~~~LtIWD~~~~~lE~~~~f-~~~~~I~dLDWtst~--d~qsiLaVGf~~~v~l~~Q~R~dy~~~~p~w~~i 118 (631)
T PF12234_consen 42 KIAVVDSSRSELTIWDTRSGVLEYEESF-SEDDPIRDLDWTSTP--DGQSILAVGFPHHVLLYTQLRYDYTNKGPSWAPI 118 (631)
T ss_pred cEEEEECCCCEEEEEEcCCcEEEEeeee-cCCCceeeceeeecC--CCCEEEEEEcCcEEEEEEccchhhhcCCccccee
Confidence 34443444 4899999864322 234 446789999997533 3356788889999999853211111111122233
Q ss_pred ee--eeccc-cceEEEEEeCCCCEEEEeeCCCcEEEEec
Q 036314 113 KI--LRGHK-ASVHSIAAETSGNMVCSGSWDCTISLWRT 148 (347)
Q Consensus 113 ~~--~~~h~-~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~ 148 (347)
+. +..|+ .+|.+..|.++|.+++.+ +..+.|++-
T Consensus 119 ~~i~i~~~T~h~Igds~Wl~~G~LvV~s--GNqlfv~dk 155 (631)
T PF12234_consen 119 RKIDISSHTPHPIGDSIWLKDGTLVVGS--GNQLFVFDK 155 (631)
T ss_pred EEEEeecCCCCCccceeEecCCeEEEEe--CCEEEEECC
Confidence 22 34455 678999999999877644 356788763
No 378
>KOG2247 consensus WD40 repeat-containing protein [General function prediction only]
Probab=90.10 E-value=0.044 Score=49.85 Aligned_cols=139 Identities=19% Similarity=0.200 Sum_probs=87.0
Q ss_pred CCCCeEEEEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCC-CC
Q 036314 195 PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSH-NS 273 (347)
Q Consensus 195 ~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h-~~ 273 (347)
+.+..++.+..+..+..||-. ++...........-.++++-.....++.+...+.+.+||+..... .++... ..
T Consensus 44 ~e~~nlavaca~tiv~~YD~a-gq~~le~n~tg~aldm~wDkegdvlavlAek~~piylwd~n~eyt----qqLE~gg~~ 118 (615)
T KOG2247|consen 44 PEGHNLAVACANTIVIYYDKA-GQVILELNPTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYT----QQLESGGTS 118 (615)
T ss_pred cCCCceehhhhhhHHHhhhhh-cceecccCCchhHhhhhhccccchhhhhhhcCCCeeechhhhhhH----HHHhccCcc
Confidence 556668888888899999843 333333322222222333333334455566789999999874321 122111 11
Q ss_pred CeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeecCCCEEEEccCCceEE
Q 036314 274 WISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGGVDSKLC 339 (347)
Q Consensus 274 ~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~D~~v~ 339 (347)
.-.=..|++.... ++-+-..+.+.|++..+.......--|...+.+.+|-+.++.+.++.|.++.
T Consensus 119 s~sll~wsKg~~e-l~ig~~~gn~viynhgtsR~iiv~Gkh~RRgtq~av~lEd~vil~dcd~~L~ 183 (615)
T KOG2247|consen 119 SKSLLAWSKGTPE-LVIGNNAGNIVIYNHGTSRRIIVMGKHQRRGTQIAVTLEDYVILCDCDNTLS 183 (615)
T ss_pred hHHHHhhccCCcc-ccccccccceEEEeccchhhhhhhcccccceeEEEecccceeeecCcHHHHH
Confidence 1122668877654 7777788999999988765444433388899999998888888888886653
No 379
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=90.03 E-value=16 Score=33.81 Aligned_cols=49 Identities=10% Similarity=0.231 Sum_probs=37.0
Q ss_pred eEEEEcCCCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccc
Q 036314 46 LGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDA 99 (347)
Q Consensus 46 ~i~iw~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~ 99 (347)
.|++|+..|..+..+.=..+.+.++.|..+. .|+.-..||+++++|+..
T Consensus 62 ~I~iys~sG~ll~~i~w~~~~iv~~~wt~~e-----~LvvV~~dG~v~vy~~~G 110 (410)
T PF04841_consen 62 SIQIYSSSGKLLSSIPWDSGRIVGMGWTDDE-----ELVVVQSDGTVRVYDLFG 110 (410)
T ss_pred EEEEECCCCCEeEEEEECCCCEEEEEECCCC-----eEEEEEcCCEEEEEeCCC
Confidence 5999999887766544222889999997632 366778999999999864
No 380
>KOG4649 consensus PQQ (pyrrolo-quinoline quinone) repeat protein [Secondary metabolites biosynthesis, transport and catabolism]
Probab=89.11 E-value=13 Score=31.59 Aligned_cols=63 Identities=13% Similarity=0.145 Sum_probs=46.4
Q ss_pred CCCeEEEEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCC
Q 036314 196 QQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRK 258 (347)
Q Consensus 196 ~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~ 258 (347)
-+++++.|...|.+.+.+.++|+..-.+..-..+.+-+....++.++-.|+.|++.+..|++.
T Consensus 62 vgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk~~a~~d~~~glIycgshd~~~yalD~~~ 124 (354)
T KOG4649|consen 62 VGDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVKVRAQCDFDGGLIYCGSHDGNFYALDPKT 124 (354)
T ss_pred ECCEEEEEEccCcEEEEEecchhheeeeeehhhhccceEEcCCCceEEEecCCCcEEEecccc
Confidence 356788899999999999999976655544344443333334556889999999999999875
No 381
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=88.39 E-value=19 Score=32.48 Aligned_cols=142 Identities=11% Similarity=0.127 Sum_probs=69.0
Q ss_pred ccceEEEEeC-CCCeEEEEecCC-----cEEEEECCCCceeeeeee--Ce---eeEEEEee-CCCCcEEEEecCCCcEEE
Q 036314 186 TQCVSSVVWP-QQETIYSASWDH-----SVRTWDVEMGKDLSDIFC--GK---ALNCIDIG-GEGSALIAAGGSDPILRI 253 (347)
Q Consensus 186 ~~~v~~~~~~-~~~~l~s~s~dg-----~v~vwd~~~~~~~~~~~~--~~---~~~~~~~~-~~~~~~la~~~~d~~i~i 253 (347)
...+..+.|. +++.|+..-.++ .+.++|..++........ .. ......+. +++..++.....||.-+|
T Consensus 183 ~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G~~hl 262 (353)
T PF00930_consen 183 DYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVVLEETSDGWVDVYDPPHFLGPDGNEFLWISERDGYRHL 262 (353)
T ss_dssp SEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEEEEEEESSSSSSSSSEEEE-TTTSSEEEEEEETTSSEEE
T ss_pred ccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCCceeEEEEecCCcceeeecccccccCCCCEEEEEEEcCCCcEE
Confidence 3456677774 444344333332 255678776644222211 10 11223332 555556655557776666
Q ss_pred EeCCCCCCCCCeEEecCCCCCeeE-EEeCCCCCeEEEEEeCCC--cEEEE--EcCCCccceeecCCCCeEEEEeecC-CC
Q 036314 254 WDPRKPGTSAPVFQFSSHNSWISA-CKWHNKSWFHLISASYDG--KVMLW--DLRTAWPLSVIDSHKDKVLCADWWR-GD 327 (347)
Q Consensus 254 wd~~~~~~~~~~~~~~~h~~~v~~-v~~s~~~~~~l~s~s~D~--~i~lw--d~~~~~~~~~~~~h~~~v~~~~~~~-~~ 327 (347)
|-....+. ....+....-.|.. +.+++++.....+|..++ .-.|| +++.+..+..++...+.-..+.||| |+
T Consensus 263 y~~~~~~~--~~~~lT~G~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~~~~~~~~LT~~~~~~~~~~~Spdg~ 340 (353)
T PF00930_consen 263 YLYDLDGG--KPRQLTSGDWEVTSILGWDEDNNRIYFTANGDNPGERHLYRVSLDSGGEPKCLTCEDGDHYSASFSPDGK 340 (353)
T ss_dssp EEEETTSS--EEEESS-SSS-EEEEEEEECTSSEEEEEESSGGTTSBEEEEEETTETTEEEESSTTSSTTEEEEE-TTSS
T ss_pred EEEccccc--ceeccccCceeecccceEcCCCCEEEEEecCCCCCceEEEEEEeCCCCCeEeccCCCCCceEEEECCCCC
Confidence 65433221 13344434434544 667888777666776533 44455 5551233455543333336788886 45
Q ss_pred EE
Q 036314 328 SV 329 (347)
Q Consensus 328 ~l 329 (347)
++
T Consensus 341 y~ 342 (353)
T PF00930_consen 341 YY 342 (353)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 382
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=87.36 E-value=17 Score=30.98 Aligned_cols=138 Identities=14% Similarity=0.140 Sum_probs=67.4
Q ss_pred eEEEEe-CCCCeEEEEe-cCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEe-CCCCCCCCCe
Q 036314 189 VSSVVW-PQQETIYSAS-WDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWD-PRKPGTSAPV 265 (347)
Q Consensus 189 v~~~~~-~~~~~l~s~s-~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd-~~~~~~~~~~ 265 (347)
+.+.+. ++++.++... .++.-.||-...+.....+.....+..-.|.+. +.+.+....+...+++. .... ...+.
T Consensus 26 ~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~~~~~~~~g~~l~~PS~d~~-g~~W~v~~~~~~~~~~~~~~~g-~~~~~ 103 (253)
T PF10647_consen 26 VTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGGPVRPVLTGGSLTRPSWDPD-GWVWTVDDGSGGVRVVRDSASG-TGEPV 103 (253)
T ss_pred ccceEECCCCCeEEEEEEcCCCCEEEEEcCCCcceeeccCCccccccccCC-CCEEEEEcCCCceEEEEecCCC-cceeE
Confidence 334444 4666665544 233333443333333333323334445566555 44544544555556652 2221 11111
Q ss_pred -EEecCCCCCeeEEEeCCCCCeEEEEEe--CCCcEEEEEcCC---Ccc------ceeecCCCCeEEEEeecCCCE
Q 036314 266 -FQFSSHNSWISACKWHNKSWFHLISAS--YDGKVMLWDLRT---AWP------LSVIDSHKDKVLCADWWRGDS 328 (347)
Q Consensus 266 -~~~~~h~~~v~~v~~s~~~~~~l~s~s--~D~~i~lwd~~~---~~~------~~~~~~h~~~v~~~~~~~~~~ 328 (347)
.....-...|.++++||||.+..+... .++.|.+=-+.. +.+ ..........+..++|.++..
T Consensus 104 ~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~~ 178 (253)
T PF10647_consen 104 EVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSDDST 178 (253)
T ss_pred EecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceeeeecCCCE
Confidence 111111127999999999987544442 356677665432 211 112223346789999986554
No 383
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=87.27 E-value=14 Score=33.96 Aligned_cols=38 Identities=18% Similarity=0.075 Sum_probs=31.1
Q ss_pred eeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCC
Q 036314 114 ILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDS 151 (347)
Q Consensus 114 ~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~ 151 (347)
.|......+.++..+|++++++....=|.|.|+|+...
T Consensus 302 ~l~D~~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~ 339 (415)
T PF14655_consen 302 GLPDSKREGESICLSPSGRLAAVTDSLGRVLLIDVARG 339 (415)
T ss_pred eeccCCceEEEEEECCCCCEEEEEcCCCcEEEEECCCC
Confidence 45555666889999999999888877899999998764
No 384
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=86.33 E-value=3 Score=23.93 Aligned_cols=31 Identities=16% Similarity=0.042 Sum_probs=23.0
Q ss_pred CCCCeEEEEEeCCCcEEEEEcCCCccceeec
Q 036314 282 NKSWFHLISASYDGKVMLWDLRTAWPLSVID 312 (347)
Q Consensus 282 ~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~ 312 (347)
|++.+++++...+++|.++|..+++.+..+.
T Consensus 1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~ 31 (42)
T TIGR02276 1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIP 31 (42)
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCeEEEEEE
Confidence 4566666666678999999998877666654
No 385
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=86.05 E-value=14 Score=35.97 Aligned_cols=101 Identities=19% Similarity=0.273 Sum_probs=58.4
Q ss_pred eEEEEec-CCcEEEEECCCCceeeeeee--CeeeEEEEeeC-CCCcEEEEecCCCcEEEEeCCC-----CC-CCCCe--E
Q 036314 199 TIYSASW-DHSVRTWDVEMGKDLSDIFC--GKALNCIDIGG-EGSALIAAGGSDPILRIWDPRK-----PG-TSAPV--F 266 (347)
Q Consensus 199 ~l~s~s~-dg~v~vwd~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~la~~~~d~~i~iwd~~~-----~~-~~~~~--~ 266 (347)
.++.... ...+.|||.+.+........ ...+..++|.+ ++++.+.+-|..+.|.+|--.. .. ...++ .
T Consensus 42 k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~~~p~w~~i~~i 121 (631)
T PF12234_consen 42 KIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTNKGPSWAPIRKI 121 (631)
T ss_pred cEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhcCCcccceeEEE
Confidence 3333333 45699999988764333322 45677787752 3444555556788898885321 11 11122 2
Q ss_pred EecCCC-CCeeEEEeCCCCCeEEEEEeCCCcEEEEEc
Q 036314 267 QFSSHN-SWISACKWHNKSWFHLISASYDGKVMLWDL 302 (347)
Q Consensus 267 ~~~~h~-~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~ 302 (347)
.+..|+ ..|.+..|.++|. |+.|+ +..+.|+|-
T Consensus 122 ~i~~~T~h~Igds~Wl~~G~--LvV~s-GNqlfv~dk 155 (631)
T PF12234_consen 122 DISSHTPHPIGDSIWLKDGT--LVVGS-GNQLFVFDK 155 (631)
T ss_pred EeecCCCCCccceeEecCCe--EEEEe-CCEEEEECC
Confidence 234454 4688999999983 44444 346777764
No 386
>KOG4499 consensus Ca2+-binding protein Regucalcin/SMP30 [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=85.53 E-value=20 Score=30.00 Aligned_cols=95 Identities=12% Similarity=0.085 Sum_probs=54.7
Q ss_pred EEEEEeecCCCceEEEEEccCCCcEEEEe--ccccccccCccccceeeeeec---cccc-eEEEEEeCCCCEEEEeeCCC
Q 036314 68 SSVNIIKSDGLKYVTVATASKDQTLRLWK--FDAEELVNHPKKIRSFKILRG---HKAS-VHSIAAETSGNMVCSGSWDC 141 (347)
Q Consensus 68 ~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd--~~~~~~~~~~~~~~~~~~~~~---h~~~-V~~v~~s~~~~~l~sgs~Dg 141 (347)
+.++|..+. -.+.++-|.+-+|..|| .+++.+... +.+..++. .... --.+++..+|++.++.=..+
T Consensus 161 Ngl~Wd~d~---K~fY~iDsln~~V~a~dyd~~tG~~snr----~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~ 233 (310)
T KOG4499|consen 161 NGLAWDSDA---KKFYYIDSLNYEVDAYDYDCPTGDLSNR----KVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGG 233 (310)
T ss_pred ccccccccC---cEEEEEccCceEEeeeecCCCcccccCc----ceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCc
Confidence 456776432 24567788889999999 445544321 11111111 1111 12244566788777776677
Q ss_pred cEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe
Q 036314 142 TISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW 194 (347)
Q Consensus 142 ~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 194 (347)
+|...|..++ +.+.+++-.+..+++.+|
T Consensus 234 ~V~~~dp~tG-------------------------K~L~eiklPt~qitsccF 261 (310)
T KOG4499|consen 234 TVQKVDPTTG-------------------------KILLEIKLPTPQITSCCF 261 (310)
T ss_pred EEEEECCCCC-------------------------cEEEEEEcCCCceEEEEe
Confidence 7777776543 445555556777888887
No 387
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=85.48 E-value=3.5 Score=34.34 Aligned_cols=67 Identities=12% Similarity=0.191 Sum_probs=46.1
Q ss_pred EEEEccCCCcEEEEeccccccccCccccceeeee-----eccccceEEEEEeCCCCEEEEeeCCCcEEEEecC
Q 036314 82 TVATASKDQTLRLWKFDAEELVNHPKKIRSFKIL-----RGHKASVHSIAAETSGNMVCSGSWDCTISLWRTN 149 (347)
Q Consensus 82 ~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~-----~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~ 149 (347)
+|+.-+.+|.+.+||+.+.++...+.+..++-.. ......|..+.++.+|.-+++-+ +|....|+..
T Consensus 24 ~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y~~~ 95 (219)
T PF07569_consen 24 YLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSYSPD 95 (219)
T ss_pred EEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEeccc
Confidence 5778899999999999988765443222222110 03567788888998898777654 4778888753
No 388
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=84.72 E-value=38 Score=32.44 Aligned_cols=115 Identities=10% Similarity=0.177 Sum_probs=63.4
Q ss_pred cceEEEEeC-----CCCeEEEEecCCcEEEEECCC-----Cceeeeeee--Ce--e--eEEEEeeCCCCcEEEEecCCCc
Q 036314 187 QCVSSVVWP-----QQETIYSASWDHSVRTWDVEM-----GKDLSDIFC--GK--A--LNCIDIGGEGSALIAAGGSDPI 250 (347)
Q Consensus 187 ~~v~~~~~~-----~~~~l~s~s~dg~v~vwd~~~-----~~~~~~~~~--~~--~--~~~~~~~~~~~~~la~~~~d~~ 250 (347)
..|.++.|. +-..|+.....+.|.||.+.. ++.+....+ .+ + .....|+|.. .+++.=.....
T Consensus 57 EhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~-~iL~VLT~~dv 135 (671)
T PF15390_consen 57 EHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKK-AILTVLTARDV 135 (671)
T ss_pred ceeeeeeecCcccCCCCceEEEeccceEEEEEeccCccccccceeeeeeeccCCcccCCCcccccCCC-ceEEEEecCce
Confidence 357888883 233677888899999998752 222222111 11 1 1123455543 34443333333
Q ss_pred EEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCC
Q 036314 251 LRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRT 304 (347)
Q Consensus 251 i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~ 304 (347)
--+++.+.... +-...+ ...+.|.|..|.+||.+++++.+..=.-.+||-..
T Consensus 136 SV~~sV~~d~s-rVkaDi-~~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~~q 187 (671)
T PF15390_consen 136 SVLPSVHCDSS-RVKADI-KTSGLIHCACWTKDGQRLVVAVGSSLHSYIWDSAQ 187 (671)
T ss_pred eEeeeeeeCCc-eEEEec-cCCceEEEEEecCcCCEEEEEeCCeEEEEEecCch
Confidence 33556554322 112233 34567999999999987666555544567787543
No 389
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=84.63 E-value=2.3 Score=40.99 Aligned_cols=36 Identities=19% Similarity=0.231 Sum_probs=25.4
Q ss_pred eeEEEeCC---CCCeEEEEEeCCCcEEEEEcCCCcccee
Q 036314 275 ISACKWHN---KSWFHLISASYDGKVMLWDLRTAWPLSV 310 (347)
Q Consensus 275 v~~v~~s~---~~~~~l~s~s~D~~i~lwd~~~~~~~~~ 310 (347)
+.+++..+ ++..+|++.+.|+++|+||+++++.+.+
T Consensus 217 ~~~~~~~~~~~~~~~~l~tl~~D~~LRiW~l~t~~~~~~ 255 (547)
T PF11715_consen 217 AASLAVSSSEINDDTFLFTLSRDHTLRIWSLETGQCLAT 255 (547)
T ss_dssp EEEEEE-----ETTTEEEEEETTSEEEEEETTTTCEEEE
T ss_pred cceEEEecceeCCCCEEEEEeCCCeEEEEECCCCeEEEE
Confidence 34455544 1234799999999999999999887544
No 390
>PHA02790 Kelch-like protein; Provisional
Probab=84.31 E-value=38 Score=32.07 Aligned_cols=58 Identities=7% Similarity=0.003 Sum_probs=29.0
Q ss_pred CCCeEEEEecCC---cEEEEECCCCceeee--eeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCC
Q 036314 196 QQETIYSASWDH---SVRTWDVEMGKDLSD--IFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRK 258 (347)
Q Consensus 196 ~~~~l~s~s~dg---~v~vwd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~ 258 (347)
++...+.|+.++ .+..||.++...... +.....-.+++. -++.+.+.|+ .+..||++.
T Consensus 362 ~g~IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~~r~~~~~~~--~~~~IYv~GG---~~e~ydp~~ 424 (480)
T PHA02790 362 NNVIYVIGGHSETDTTTEYLLPNHDQWQFGPSTYYPHYKSCALV--FGRRLFLVGR---NAEFYCESS 424 (480)
T ss_pred CCEEEEecCcCCCCccEEEEeCCCCEEEeCCCCCCccccceEEE--ECCEEEEECC---ceEEecCCC
Confidence 445556666543 467888877654321 111111112211 2345666664 577888764
No 391
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=84.31 E-value=3.5 Score=24.25 Aligned_cols=31 Identities=26% Similarity=0.353 Sum_probs=24.0
Q ss_pred eeEEEEeeCCCC--cEEEEecCCCcEEEEeCCC
Q 036314 228 ALNCIDIGGEGS--ALIAAGGSDPILRIWDPRK 258 (347)
Q Consensus 228 ~~~~~~~~~~~~--~~la~~~~d~~i~iwd~~~ 258 (347)
.+.++.|+|.+. .+++.+-.-+.|.++|++.
T Consensus 2 AvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 2 AVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 356788876555 5788777789999999984
No 392
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=83.30 E-value=42 Score=31.83 Aligned_cols=26 Identities=19% Similarity=0.174 Sum_probs=22.0
Q ss_pred EEEEEeCCCcEEEEEcCCCccceeec
Q 036314 287 HLISASYDGKVMLWDLRTAWPLSVID 312 (347)
Q Consensus 287 ~l~s~s~D~~i~lwd~~~~~~~~~~~ 312 (347)
.|..++.||.+..+|.++|+.+-+++
T Consensus 408 ~v~~g~~dG~l~ald~~tG~~lW~~~ 433 (488)
T cd00216 408 LVFAGAADGYFRAFDATTGKELWKFR 433 (488)
T ss_pred eEEEECCCCeEEEEECCCCceeeEEE
Confidence 57888899999999999998776654
No 393
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=83.20 E-value=6.1 Score=22.55 Aligned_cols=31 Identities=23% Similarity=0.297 Sum_probs=20.9
Q ss_pred CCCeEEE-EecCCcEEEEECCCCceeeeeeeC
Q 036314 196 QQETIYS-ASWDHSVRTWDVEMGKDLSDIFCG 226 (347)
Q Consensus 196 ~~~~l~s-~s~dg~v~vwd~~~~~~~~~~~~~ 226 (347)
+++.|+. .-.+++|.++|..+++.+..+..+
T Consensus 2 d~~~lyv~~~~~~~v~~id~~~~~~~~~i~vg 33 (42)
T TIGR02276 2 DGTKLYVTNSGSNTVSVIDTATNKVIATIPVG 33 (42)
T ss_pred CCCEEEEEeCCCCEEEEEECCCCeEEEEEECC
Confidence 4555544 445789999999887766665543
No 394
>PHA03098 kelch-like protein; Provisional
Probab=82.92 E-value=46 Score=31.94 Aligned_cols=47 Identities=11% Similarity=0.180 Sum_probs=23.0
Q ss_pred EEEEECCCCceeee--eeeCee-eEEEEeeCCCCcEEEEecCC-----CcEEEEeCCC
Q 036314 209 VRTWDVEMGKDLSD--IFCGKA-LNCIDIGGEGSALIAAGGSD-----PILRIWDPRK 258 (347)
Q Consensus 209 v~vwd~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~la~~~~d-----~~i~iwd~~~ 258 (347)
+.+||..+.+.... +..... .....+ ++.+++.||.+ +.+..||+..
T Consensus 458 v~~yd~~~~~W~~~~~~~~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~ 512 (534)
T PHA03098 458 VESYNPVTNKWTELSSLNFPRINASLCIF---NNKIYVVGGDKYEYYINEIEVYDDKT 512 (534)
T ss_pred EEEecCCCCceeeCCCCCcccccceEEEE---CCEEEEEcCCcCCcccceeEEEeCCC
Confidence 78889887654321 111111 111122 34466666653 4667777653
No 395
>KOG1900 consensus Nuclear pore complex, Nup155 component (D Nup154, sc Nup157/Nup170) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=82.78 E-value=30 Score=36.28 Aligned_cols=167 Identities=14% Similarity=0.126 Sum_probs=82.6
Q ss_pred ecCCeEEEEcCC-CeEEEEeeccCCceEEEEEeecCCCc-----eEEEEEccCCCcEEEEeccccccccCccccceeeee
Q 036314 42 CYDNLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLK-----YVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKIL 115 (347)
Q Consensus 42 ~~d~~i~iw~~~-~~~~~~l~~h~~~V~~v~~~~~~~~~-----~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~ 115 (347)
..|+.+.+|+.. +...+.+.+-...|..|......... .+.|+.+. --.|-++-+.-.+.............+
T Consensus 96 TiDn~L~lWny~~~~e~~~~d~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT-~~ei~ilgV~~~~~~~~~~~f~~~~~i 174 (1311)
T KOG1900|consen 96 TIDNNLFLWNYESDNELAEYDGLSHTILKVGLVKPKPGVFVPEIQHLLVVAT-PVEIVILGVSFDEFTGELSIFNTSFKI 174 (1311)
T ss_pred EeCCeEEEEEcCCCCccccccchhhhheeeeeecCCCCcchhhhheeEEecc-cceEEEEEEEeccccCcccccccceee
Confidence 358899999964 35556667666666666654322111 11222222 235677765433221110000010112
Q ss_pred eccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCC---c-cceeeeccCCCccccccccccccccccCCccceEE
Q 036314 116 RGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAG---N-QVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSS 191 (347)
Q Consensus 116 ~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 191 (347)
.-..-.|+++....+|+.+++| .|| .||.+.-....+ + ........+... .+-.+.++..-.+.++|..
T Consensus 175 ~~dg~~V~~I~~t~nGRIF~~G-~dg--~lyEl~Yq~~~gWf~~rc~Kiclt~s~ls----~lvPs~~~~~~~~~dpI~q 247 (1311)
T KOG1900|consen 175 SVDGVSVNCITYTENGRIFFAG-RDG--NLYELVYQAEDGWFGSRCRKICLTKSVLS----SLVPSLLSVPGSSKDPIRQ 247 (1311)
T ss_pred ecCCceEEEEEeccCCcEEEee-cCC--CEEEEEEeccCchhhcccccccCchhHHH----HhhhhhhcCCCCCCCccee
Confidence 2224557888878888887754 555 566543211000 0 000000000000 0001111111246678999
Q ss_pred EEeCCCC-eEEEEecCCcEEEEECCC
Q 036314 192 VVWPQQE-TIYSASWDHSVRTWDVEM 216 (347)
Q Consensus 192 ~~~~~~~-~l~s~s~dg~v~vwd~~~ 216 (347)
+...+.. .+++-+..++|++||+..
T Consensus 248 i~ID~SR~IlY~lsek~~v~~Y~i~~ 273 (1311)
T KOG1900|consen 248 ITIDNSRNILYVLSEKGTVSAYDIGG 273 (1311)
T ss_pred eEeccccceeeeeccCceEEEEEccC
Confidence 9886544 578889999999999965
No 396
>KOG1897 consensus Damage-specific DNA binding complex, subunit DDB1 [Replication, recombination and repair]
Probab=82.16 E-value=63 Score=33.01 Aligned_cols=50 Identities=18% Similarity=0.324 Sum_probs=37.9
Q ss_pred EeCCCcEEEEEcCCCccceeecCCCCeEEEEeec-CCCEEEEccCCceEEE
Q 036314 291 ASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWW-RGDSVISGGVDSKLCV 340 (347)
Q Consensus 291 ~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~-~~~~l~s~s~D~~v~v 340 (347)
++-+..|+++++.+++.++.-..|...+..+... .|+.++.|..=+.+.+
T Consensus 844 A~In~~vrLye~t~~~eLr~e~~~~~~~~aL~l~v~gdeI~VgDlm~Sitl 894 (1096)
T KOG1897|consen 844 AGINQSVRLYEWTTERELRIECNISNPIIALDLQVKGDEIAVGDLMRSITL 894 (1096)
T ss_pred EecCcEEEEEEccccceehhhhcccCCeEEEEEEecCcEEEEeeccceEEE
Confidence 4677899999999886677667788888877775 5778887776665554
No 397
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=80.00 E-value=33 Score=28.37 Aligned_cols=44 Identities=11% Similarity=0.203 Sum_probs=31.7
Q ss_pred ccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEe
Q 036314 86 ASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSG 137 (347)
Q Consensus 86 ~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sg 137 (347)
+...+.|.+|++...+ .+...+|.. -+.|..+.++..|++++|-
T Consensus 34 a~~g~~Vev~~l~~~~-------~~~~~~F~T-v~~V~~l~y~~~GDYlvTl 77 (215)
T PF14761_consen 34 AASGCKVEVYDLEQEE-------CPLLCTFST-VGRVLQLVYSEAGDYLVTL 77 (215)
T ss_pred EcCCCEEEEEEcccCC-------CceeEEEcc-hhheeEEEeccccceEEEE
Confidence 3555689999998432 234445543 4789999999999999974
No 398
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=79.49 E-value=55 Score=30.64 Aligned_cols=223 Identities=13% Similarity=0.065 Sum_probs=99.9
Q ss_pred eeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeC
Q 036314 60 LEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSW 139 (347)
Q Consensus 60 l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~ 139 (347)
+....-....+..+|.+. .++. ..||.-.++..... +.. ..+.....+|.+.++ +|.-..
T Consensus 28 lg~~~~~p~~ls~npngr----~v~V-~g~geY~iyt~~~~---------r~k-----~~G~g~~~vw~~~n~-yAv~~~ 87 (443)
T PF04053_consen 28 LGSCEIYPQSLSHNPNGR----FVLV-CGDGEYEIYTALAW---------RNK-----AFGSGLSFVWSSRNR-YAVLES 87 (443)
T ss_dssp EEE-SS--SEEEE-TTSS----EEEE-EETTEEEEEETTTT---------EEE-----EEEE-SEEEE-TSSE-EEEE-T
T ss_pred CCCCCcCCeeEEECCCCC----EEEE-EcCCEEEEEEccCC---------ccc-----ccCceeEEEEecCcc-EEEEEC
Confidence 333444467888888543 3443 77888888873221 111 123344567888555 555666
Q ss_pred CCcEEEEe-cCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeCCCCeEEEEecCCcEEEEECCCCc
Q 036314 140 DCTISLWR-TNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGK 218 (347)
Q Consensus 140 Dg~I~iwd-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~dg~v~vwd~~~~~ 218 (347)
..+|+|+. .... ..+.+... ..+..+. . |..|+..+ ++.|.+||+++++
T Consensus 88 ~~~I~I~kn~~~~--------------------------~~k~i~~~-~~~~~If-~-G~LL~~~~-~~~i~~yDw~~~~ 137 (443)
T PF04053_consen 88 SSTIKIYKNFKNE--------------------------VVKSIKLP-FSVEKIF-G-GNLLGVKS-SDFICFYDWETGK 137 (443)
T ss_dssp TS-EEEEETTEE---------------------------TT-----S-S-EEEEE---SSSEEEEE-TTEEEEE-TTT--
T ss_pred CCeEEEEEcCccc--------------------------cceEEcCC-cccceEE-c-CcEEEEEC-CCCEEEEEhhHcc
Confidence 88899963 2211 00011111 1123333 2 55565554 4489999999999
Q ss_pred eeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCC--------CCCCCeEEecCCCCCeeEEEeCCCCCeEEEE
Q 036314 219 DLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKP--------GTSAPVFQFSSHNSWISACKWHNKSWFHLIS 290 (347)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~--------~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s 290 (347)
.++.+... ++..+.|+++ +.++|..+ +..+.+++.... +-......+..-...|.+..|..+ .++.|
T Consensus 138 ~i~~i~v~-~vk~V~Ws~~-g~~val~t-~~~i~il~~~~~~~~~~~~~g~e~~f~~~~E~~~~IkSg~W~~d--~fiYt 212 (443)
T PF04053_consen 138 LIRRIDVS-AVKYVIWSDD-GELVALVT-KDSIYILKYNLEAVAAIPEEGVEDAFELIHEISERIKSGCWVED--CFIYT 212 (443)
T ss_dssp EEEEESS--E-EEEEE-TT-SSEEEEE--S-SEEEEEE-HHHHHHBTTTB-GGGEEEEEEE-S--SEEEEETT--EEEEE
T ss_pred eeeEEecC-CCcEEEEECC-CCEEEEEe-CCeEEEEEecchhcccccccCchhceEEEEEecceeEEEEEEcC--EEEEE
Confidence 88887644 3678888655 45666665 456777764321 000012222222456777788654 44444
Q ss_pred EeCCCcEEEEEcCCCccceeecCCCCeEEEEeecC-CCEEEEccCCceEEEee
Q 036314 291 ASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKLCVSS 342 (347)
Q Consensus 291 ~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~D~~v~vw~ 342 (347)
... .++- +-.|+ ..++..-..+++=+.+.+ .+++.....|+.|..+.
T Consensus 213 T~~--~lkY--l~~Ge-~~~i~~ld~~~yllgy~~~~~~ly~~Dr~~~v~~~~ 260 (443)
T PF04053_consen 213 TSN--HLKY--LVNGE-TGIIAHLDKPLYLLGYLPKENRLYLIDRDGNVISYE 260 (443)
T ss_dssp -TT--EEEE--EETTE-EEEEEE-SS--EEEEEETTTTEEEEE-TT--EEEEE
T ss_pred cCC--eEEE--EEcCC-cceEEEcCCceEEEEEEccCCEEEEEECCCCEEEEE
Confidence 443 6665 33332 222221122344444443 34565666777776654
No 399
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=79.15 E-value=9.2 Score=21.53 Aligned_cols=29 Identities=7% Similarity=0.203 Sum_probs=20.6
Q ss_pred CCCeeEEEeCCCCCeEEEEEeCC--CcEEEE
Q 036314 272 NSWISACKWHNKSWFHLISASYD--GKVMLW 300 (347)
Q Consensus 272 ~~~v~~v~~s~~~~~~l~s~s~D--~~i~lw 300 (347)
...-....|+|||.+++.++..+ |.-.||
T Consensus 8 ~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy 38 (39)
T PF07676_consen 8 PGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY 38 (39)
T ss_dssp SSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred CccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence 33456788999998877777777 776666
No 400
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=78.76 E-value=64 Score=31.02 Aligned_cols=148 Identities=14% Similarity=0.225 Sum_probs=74.7
Q ss_pred ccceEEEEeCCCCeEEEEe---cCCcEEEEECCCCceeeeeeeCeeeEEEEeeCC----CCcEEEEecCCCcEEEEeCCC
Q 036314 186 TQCVSSVVWPQQETIYSAS---WDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGE----GSALIAAGGSDPILRIWDPRK 258 (347)
Q Consensus 186 ~~~v~~~~~~~~~~l~s~s---~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~----~~~~la~~~~d~~i~iwd~~~ 258 (347)
-.++.+++|.||+.++-.. .+|.++.=| ...+..+. -+..+.|+|. -..++|.- ....|.+|.+-.
T Consensus 19 iHPvhGlaWTDGkqVvLT~L~l~~gE~kfGd---s~viGqFE---hV~GlsW~P~~~~~~paLLAVQ-HkkhVtVWqL~~ 91 (671)
T PF15390_consen 19 IHPVHGLAWTDGKQVVLTDLQLHNGEPKFGD---SKVIGQFE---HVHGLSWAPPCTADTPALLAVQ-HKKHVTVWQLCP 91 (671)
T ss_pred hccccceEecCCCEEEEEeeeeeCCccccCC---ccEeeccc---eeeeeeecCcccCCCCceEEEe-ccceEEEEEecc
Confidence 3578899999988754332 223333211 12233222 3455666654 23466654 467899998752
Q ss_pred C--CCCCCeEEecCCC-C----CeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCC-ccc-eeecCCCCeEEEEeec-CCCE
Q 036314 259 P--GTSAPVFQFSSHN-S----WISACKWHNKSWFHLISASYDGKVMLWDLRTA-WPL-SVIDSHKDKVLCADWW-RGDS 328 (347)
Q Consensus 259 ~--~~~~~~~~~~~h~-~----~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~-~~~-~~~~~h~~~v~~~~~~-~~~~ 328 (347)
. +..+.+..-..+. . --..|.|+|...- |+.-.....--+.+++.. ..+ ..+. -.+.|.|.+|- +|++
T Consensus 92 s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~i-L~VLT~~dvSV~~sV~~d~srVkaDi~-~~G~IhCACWT~DG~R 169 (671)
T PF15390_consen 92 STTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAI-LTVLTARDVSVLPSVHCDSSRVKADIK-TSGLIHCACWTKDGQR 169 (671)
T ss_pred CccccccceeeeeeeccCCcccCCCcccccCCCce-EEEEecCceeEeeeeeeCCceEEEecc-CCceEEEEEecCcCCE
Confidence 1 1111111111111 0 1134789998864 444443333335666532 223 2343 36799999995 7887
Q ss_pred EEE-ccCCceEEEee
Q 036314 329 VIS-GGVDSKLCVSS 342 (347)
Q Consensus 329 l~s-~s~D~~v~vw~ 342 (347)
|+. .+.-=.-.||+
T Consensus 170 LVVAvGSsLHSyiWd 184 (671)
T PF15390_consen 170 LVVAVGSSLHSYIWD 184 (671)
T ss_pred EEEEeCCeEEEEEec
Confidence 443 23233345565
No 401
>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []). The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].
Probab=78.73 E-value=15 Score=29.33 Aligned_cols=28 Identities=14% Similarity=0.150 Sum_probs=23.0
Q ss_pred eEEEEeecC-------CCEEEEccCCceEEEeecc
Q 036314 317 KVLCADWWR-------GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 317 ~v~~~~~~~-------~~~l~s~s~D~~v~vw~~~ 344 (347)
.+..++||| +..||.-..++.|.||.-+
T Consensus 87 ~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~ 121 (173)
T PF12657_consen 87 QVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPP 121 (173)
T ss_pred cEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecC
Confidence 788999986 2359999999999999744
No 402
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=78.65 E-value=44 Score=29.08 Aligned_cols=83 Identities=11% Similarity=0.095 Sum_probs=48.5
Q ss_pred eeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCC-------CCeeEEEeCCCCCeEEEEEeCCCcEEE
Q 036314 227 KALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHN-------SWISACKWHNKSWFHLISASYDGKVML 299 (347)
Q Consensus 227 ~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~-------~~v~~v~~s~~~~~~l~s~s~D~~i~l 299 (347)
.....+++++.+..++ .+-+-+-++||................+. .-|.++.|++....+|+=+.+++.+.-
T Consensus 181 ~GfEGlA~d~~~~~l~-~aKEr~P~~I~~~~~~~~~l~~~~~~~~~~~~~~f~~DvSgl~~~~~~~~LLVLS~ESr~l~E 259 (316)
T COG3204 181 KGFEGLAWDPVDHRLF-VAKERNPIGIFEVTQSPSSLSVHASLDPTADRDLFVLDVSGLEFNAITNSLLVLSDESRRLLE 259 (316)
T ss_pred cCceeeecCCCCceEE-EEEccCCcEEEEEecCCcccccccccCcccccceEeeccccceecCCCCcEEEEecCCceEEE
Confidence 3567788887766554 44566667777654321111111111222 236778888877777777778888877
Q ss_pred EEcCCCccceee
Q 036314 300 WDLRTAWPLSVI 311 (347)
Q Consensus 300 wd~~~~~~~~~~ 311 (347)
.|.+ |+++..+
T Consensus 260 vd~~-G~~~~~l 270 (316)
T COG3204 260 VDLS-GEVIELL 270 (316)
T ss_pred EecC-CCeeeeE
Confidence 7776 4444443
No 403
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=77.19 E-value=15 Score=30.58 Aligned_cols=26 Identities=12% Similarity=0.290 Sum_probs=22.1
Q ss_pred CCCCeEEEEecCCcEEEEECCCCcee
Q 036314 195 PQQETIYSASWDHSVRTWDVEMGKDL 220 (347)
Q Consensus 195 ~~~~~l~s~s~dg~v~vwd~~~~~~~ 220 (347)
..+.+|++...+|.+.+||++..+.+
T Consensus 20 ~~~~~Ll~iT~~G~l~vWnl~~~k~~ 45 (219)
T PF07569_consen 20 CNGSYLLAITSSGLLYVWNLKKGKAV 45 (219)
T ss_pred eCCCEEEEEeCCCeEEEEECCCCeec
Confidence 46778999999999999999987654
No 404
>PHA02790 Kelch-like protein; Provisional
Probab=76.73 E-value=69 Score=30.32 Aligned_cols=21 Identities=14% Similarity=0.096 Sum_probs=12.8
Q ss_pred CCCEEEEeeCCC---cEEEEecCC
Q 036314 130 SGNMVCSGSWDC---TISLWRTND 150 (347)
Q Consensus 130 ~~~~l~sgs~Dg---~I~iwd~~~ 150 (347)
+|+..+.||.++ ++..||..+
T Consensus 362 ~g~IYviGG~~~~~~~ve~ydp~~ 385 (480)
T PHA02790 362 NNVIYVIGGHSETDTTTEYLLPNH 385 (480)
T ss_pred CCEEEEecCcCCCCccEEEEeCCC
Confidence 577777777654 355666543
No 405
>KOG3630 consensus Nuclear pore complex, Nup214/CAN component [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=76.44 E-value=7.9 Score=39.64 Aligned_cols=97 Identities=8% Similarity=0.047 Sum_probs=61.7
Q ss_pred EecCCCcEEEEeCCCCCCC-----CCeE---EecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCcc-ceeecCC
Q 036314 244 AGGSDPILRIWDPRKPGTS-----APVF---QFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWP-LSVIDSH 314 (347)
Q Consensus 244 ~~~~d~~i~iwd~~~~~~~-----~~~~---~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~-~~~~~~h 314 (347)
....+..|..||++.-... .++. +.........++.|+|.-....|.+..|+.|++..+..-.+ +..+ .-
T Consensus 119 ~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl~V~~~~~~~~~v~s~-p~ 197 (1405)
T KOG3630|consen 119 STSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSLRVKSTKQLAQNVTSF-PV 197 (1405)
T ss_pred EecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccchhhhhhhhhhhhhccc-Cc
Confidence 3445567888998642111 1111 11111224567889987766678888999999988764322 2232 23
Q ss_pred CCeEEEEeecC-CCEEEEccCCceEEEe
Q 036314 315 KDKVLCADWWR-GDSVISGGVDSKLCVS 341 (347)
Q Consensus 315 ~~~v~~~~~~~-~~~l~s~s~D~~v~vw 341 (347)
...++|++|+| |++++.|-..|++.-+
T Consensus 198 t~~~Tav~WSprGKQl~iG~nnGt~vQy 225 (1405)
T KOG3630|consen 198 TNSQTAVLWSPRGKQLFIGRNNGTEVQY 225 (1405)
T ss_pred ccceeeEEeccccceeeEecCCCeEEEe
Confidence 56789999986 8899998888887644
No 406
>KOG1897 consensus Damage-specific DNA binding complex, subunit DDB1 [Replication, recombination and repair]
Probab=76.43 E-value=96 Score=31.80 Aligned_cols=128 Identities=10% Similarity=-0.069 Sum_probs=61.4
Q ss_pred cEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCC--CC
Q 036314 208 SVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNK--SW 285 (347)
Q Consensus 208 ~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~--~~ 285 (347)
.||+++-. .....+......++.....+.. .++.++.++.+...++...+ . ....-..-...|.|+.++|- ++
T Consensus 471 ~iRl~ss~--~~~~~W~~p~~~ti~~~~~n~s-qVvvA~~~~~l~y~~i~~~~-l-~e~~~~~~e~evaCLDisp~~d~~ 545 (1096)
T KOG1897|consen 471 SIRLVSSA--GLRSEWRPPGKITIGVVSANAS-QVVVAGGGLALFYLEIEDGG-L-REVSHKEFEYEVACLDISPLGDAP 545 (1096)
T ss_pred cEEEEcch--hhhhcccCCCceEEEEEeecce-EEEEecCccEEEEEEeeccc-e-eeeeeheecceeEEEecccCCCCC
Confidence 46666533 1233333333333333333333 44445556666666665432 1 11111122346889999865 33
Q ss_pred e---EEEEEeCCCcEEEEEcCCCccceeec--CCCCeEEEEee----cCCCEEEEccCCceEEE
Q 036314 286 F---HLISASYDGKVMLWDLRTAWPLSVID--SHKDKVLCADW----WRGDSVISGGVDSKLCV 340 (347)
Q Consensus 286 ~---~l~s~s~D~~i~lwd~~~~~~~~~~~--~h~~~v~~~~~----~~~~~l~s~s~D~~v~v 340 (347)
. +++.|.++..+++.-....-.+.... .-+.-.+++.+ .+..+|..+..||.+.-
T Consensus 546 ~~s~~~aVG~Ws~~~~~l~~~pd~~~~~~~~l~~~~iPRSIl~~~~e~d~~yLlvalgdG~l~~ 609 (1096)
T KOG1897|consen 546 NKSRLLAVGLWSDISMILTFLPDLILITHEQLSGEIIPRSILLTTFEGDIHYLLVALGDGALLY 609 (1096)
T ss_pred CcceEEEEEeecceEEEEEECCCcceeeeeccCCCccchheeeEEeeccceEEEEEcCCceEEE
Confidence 3 78999887776665333221222111 11111123222 24557777788887653
No 407
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=74.40 E-value=64 Score=32.04 Aligned_cols=120 Identities=11% Similarity=0.055 Sum_probs=71.1
Q ss_pred CCcC-CceeeccCCCCCEEEEEecCCeEEEEcCC--------C----e--EE------EEeeccCCceEEEEEeecCCCc
Q 036314 21 SLHD-DWVSAVDGSNPGFILTGCYDNLGRVWKAG--------G----V--CT------HILEGHCGAVSSVNIIKSDGLK 79 (347)
Q Consensus 21 ~~h~-~~v~~~~~~~~~~l~sg~~d~~i~iw~~~--------~----~--~~------~~l~~h~~~V~~v~~~~~~~~~ 79 (347)
.+|+ +.+..-.+.+..+|+.+..||.|.+|... . . .. .....-..+.++++++... .
T Consensus 99 ~PHtIN~i~v~~lg~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~v~~SaWGLdIh~~~--~ 176 (717)
T PF08728_consen 99 FPHTINFIKVGDLGGEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLRVGASAWGLDIHDYK--K 176 (717)
T ss_pred CCceeeEEEecccCCeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEeecCCceeEEEEEecC--c
Confidence 3453 44433334456689999999999999431 0 0 00 0111223467888887211 3
Q ss_pred eEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCC-----CC-EEEEeeCCCcEEEEec
Q 036314 80 YVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETS-----GN-MVCSGSWDCTISLWRT 148 (347)
Q Consensus 80 ~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~-----~~-~l~sgs~Dg~I~iwd~ 148 (347)
.++||.+++...|.+|-+...+.-.. ..+ -..|...|-+|+|-++ |. .+++++=.|.+-+|++
T Consensus 177 ~rlIAVSsNs~~VTVFaf~l~~~r~~---~~~---s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I 245 (717)
T PF08728_consen 177 SRLIAVSSNSQEVTVFAFALVDERFY---HVP---SHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI 245 (717)
T ss_pred ceEEEEecCCceEEEEEEeccccccc---ccc---ccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence 35788888888899987654210000 000 0125566778888543 32 7778888999888877
No 408
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=73.15 E-value=57 Score=30.76 Aligned_cols=125 Identities=16% Similarity=0.175 Sum_probs=65.9
Q ss_pred EEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCC-------CCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCC
Q 036314 202 SASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGE-------GSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSW 274 (347)
Q Consensus 202 s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~ 274 (347)
.+.....+.=-|++.|+.+..+..+..+ .+.+.|. ..+.+ .|-.+..|.-.|+|..+.. + ......++
T Consensus 485 dg~~~~kLykmDIErGkvveeW~~~ddv-vVqy~p~~kf~qmt~eqtl-vGlS~~svFrIDPR~~gNK--i-~v~esKdY 559 (776)
T COG5167 485 DGGERDKLYKMDIERGKVVEEWDLKDDV-VVQYNPYFKFQQMTDEQTL-VGLSDYSVFRIDPRARGNK--I-KVVESKDY 559 (776)
T ss_pred cCCCcccceeeecccceeeeEeecCCcc-eeecCCchhHHhcCccceE-EeecccceEEecccccCCc--e-eeeeehhc
Confidence 3444445555577777776666544433 3333332 11223 4555677777777754321 1 11223344
Q ss_pred eeEEEeCCCC---CeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeec-CCCE-EEE
Q 036314 275 ISACKWHNKS---WFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWW-RGDS-VIS 331 (347)
Q Consensus 275 v~~v~~s~~~---~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~-~~~~-l~s 331 (347)
+..-.|+.-. ..++|.||.-|-||+||--.-..-..+.+-..+|..+.-. +|+. |||
T Consensus 560 ~tKn~Fss~~tTesGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaT 621 (776)
T COG5167 560 KTKNKFSSGMTTESGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILAT 621 (776)
T ss_pred cccccccccccccCceEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEe
Confidence 4444444321 1259999999999999854322222344445566666663 5665 444
No 409
>KOG2377 consensus Uncharacterized conserved protein [Function unknown]
Probab=72.52 E-value=83 Score=29.30 Aligned_cols=75 Identities=11% Similarity=0.114 Sum_probs=49.2
Q ss_pred cccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeCCC
Q 036314 118 HKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQ 197 (347)
Q Consensus 118 h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 197 (347)
..++|.++.|++|.+.+|.--.|++|.+++....+.. -....+.+..+..|.++.|.+.
T Consensus 65 d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~---------------------l~~~~~ck~k~~~IlGF~W~~s 123 (657)
T KOG2377|consen 65 DKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQ---------------------LEYTQECKTKNANILGFCWTSS 123 (657)
T ss_pred CCCceeEEEeccCcceEEEEecCceEEEEecCCCchh---------------------hHHHHHhccCcceeEEEEEecC
Confidence 4679999999999999999999999999975322110 0001122223345777888776
Q ss_pred CeEEEEecCCcEEEEEC
Q 036314 198 ETIYSASWDHSVRTWDV 214 (347)
Q Consensus 198 ~~l~s~s~dg~v~vwd~ 214 (347)
..++-.+..| +-+|.+
T Consensus 124 ~e~A~i~~~G-~e~y~v 139 (657)
T KOG2377|consen 124 TEIAFITDQG-IEFYQV 139 (657)
T ss_pred eeEEEEecCC-eEEEEE
Confidence 6666655444 666654
No 410
>KOG3630 consensus Nuclear pore complex, Nup214/CAN component [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=71.46 E-value=30 Score=35.83 Aligned_cols=132 Identities=17% Similarity=0.135 Sum_probs=74.2
Q ss_pred eCCCCe--EEEEecCCcEEEEECCCCceee---ee-------eeCe--eeEEEEeeCCCCcEEEEecCCCcEEEEeCCCC
Q 036314 194 WPQQET--IYSASWDHSVRTWDVEMGKDLS---DI-------FCGK--ALNCIDIGGEGSALIAAGGSDPILRIWDPRKP 259 (347)
Q Consensus 194 ~~~~~~--l~s~s~dg~v~vwd~~~~~~~~---~~-------~~~~--~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~ 259 (347)
+++... +...+.+-.|..||++.-..-. .. .... ...++.|.|.-....|....|+.|++.-+...
T Consensus 109 ~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl~V~~~~~~ 188 (1405)
T KOG3630|consen 109 FHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSLRVKSTKQL 188 (1405)
T ss_pred ccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccchhhhhhhhh
Confidence 355433 3444554578889987532211 00 0011 12345555433334566777888888876532
Q ss_pred CCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeec----CCCCeEEEEeec-CCCEEE
Q 036314 260 GTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVID----SHKDKVLCADWW-RGDSVI 330 (347)
Q Consensus 260 ~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~----~h~~~v~~~~~~-~~~~l~ 330 (347)
.. ....+ .-...+.+++|+|.|. +++.|-..|++.-|...- +....+. .....|+||.|- +-..++
T Consensus 189 ~~--~v~s~-p~t~~~Tav~WSprGK-Ql~iG~nnGt~vQy~P~l-eik~~ip~Pp~~e~yrvl~v~Wl~t~eflv 259 (1405)
T KOG3630|consen 189 AQ--NVTSF-PVTNSQTAVLWSPRGK-QLFIGRNNGTEVQYEPSL-EIKSEIPEPPVEENYRVLSVTWLSTQEFLV 259 (1405)
T ss_pred hh--hhccc-CcccceeeEEeccccc-eeeEecCCCeEEEeeccc-ceeecccCCCcCCCcceeEEEEecceeEEE
Confidence 11 11121 2345678999999996 588899999999887653 2112211 114689999994 443443
No 411
>KOG1916 consensus Nuclear protein, contains WD40 repeats [General function prediction only]
Probab=71.12 E-value=5.8 Score=39.54 Aligned_cols=116 Identities=12% Similarity=0.047 Sum_probs=64.3
Q ss_pred CCCcCCceeeccCCCCC--EEEEEecCCeEEEEcC---CCeE-----EEEeeccCCceEEEEEeecCCCceEEEEEccCC
Q 036314 20 PSLHDDWVSAVDGSNPG--FILTGCYDNLGRVWKA---GGVC-----THILEGHCGAVSSVNIIKSDGLKYVTVATASKD 89 (347)
Q Consensus 20 ~~~h~~~v~~~~~~~~~--~l~sg~~d~~i~iw~~---~~~~-----~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~D 89 (347)
..+.++.|-.+.|...+ .++ -.-|..-+|++ .|+. ++....-...+.-|.|.|--- ...++..+-.+
T Consensus 128 ~kgf~G~v~dl~fah~~~pk~~--~~vg~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V~wcp~~~-~~~~ic~~~~~ 204 (1283)
T KOG1916|consen 128 AKGFPGGVGDLQFAHTKCPKGR--RLVGELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLVSWCPIAV-NKVYICYGLKG 204 (1283)
T ss_pred HhcCCCCcccccccccCChHHH--HHhhhhheeehHhhccccccceEEeecCcCCCCcceeeeccccc-ccceeeeccCC
Confidence 44566666666654211 111 11145678875 3432 222222223333444443111 11356677778
Q ss_pred CcEEEEeccccccccCccccceeeeeeccccceEEEE-----------EeCCCCEEEEeeCCCcEEEEec
Q 036314 90 QTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIA-----------AETSGNMVCSGSWDCTISLWRT 148 (347)
Q Consensus 90 g~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~-----------~s~~~~~l~sgs~Dg~I~iwd~ 148 (347)
+++++...+... ...+++|...+..++ .+|||+.++.++.||.++.|-+
T Consensus 205 ~~i~lL~~~ra~----------~~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qi 264 (1283)
T KOG1916|consen 205 GEIRLLNINRAL----------RSLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQI 264 (1283)
T ss_pred CceeEeeechHH----------HHHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccceeee
Confidence 888887765331 134567877776554 4788888888888888888864
No 412
>COG5276 Uncharacterized conserved protein [Function unknown]
Probab=70.82 E-value=72 Score=27.88 Aligned_cols=133 Identities=12% Similarity=0.081 Sum_probs=77.6
Q ss_pred CCeEEEEecCCcEEEEECCCCceeeee---eeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCC
Q 036314 197 QETIYSASWDHSVRTWDVEMGKDLSDI---FCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNS 273 (347)
Q Consensus 197 ~~~l~s~s~dg~v~vwd~~~~~~~~~~---~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~ 273 (347)
.++.+.+.++..++|.|+.++.....+ .......++..+. +....+..|.-+-+.|+..+..+...-.++....
T Consensus 96 e~yvyvad~ssGL~IvDIS~P~sP~~~~~lnt~gyaygv~vsG---n~aYVadlddgfLivdvsdpssP~lagrya~~~~ 172 (370)
T COG5276 96 EEYVYVADWSSGLRIVDISTPDSPTLIGFLNTDGYAYGVYVSG---NYAYVADLDDGFLIVDVSDPSSPQLAGRYALPGG 172 (370)
T ss_pred ccEEEEEcCCCceEEEeccCCCCcceeccccCCceEEEEEecC---CEEEEeeccCcEEEEECCCCCCceeeeeeccCCC
Confidence 466777788888999999876544332 2234456666643 3444555566677889877654433334443333
Q ss_pred CeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCC---CCeEEEEeecCCCEEEEccCCc
Q 036314 274 WISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSH---KDKVLCADWWRGDSVISGGVDS 336 (347)
Q Consensus 274 ~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h---~~~v~~~~~~~~~~l~s~s~D~ 336 (347)
--..++.|.+ +-..+..|+-++|-|+....... |.+| ...+.++.-++..-+++....|
T Consensus 173 d~~~v~ISGn---~AYvA~~d~GL~ivDVSnp~sPv-li~~~n~g~g~~sv~vsdnr~y~vvy~eg 234 (370)
T COG5276 173 DTHDVAISGN---YAYVAWRDGGLTIVDVSNPHSPV-LIGSYNTGPGTYSVSVSDNRAYLVVYDEG 234 (370)
T ss_pred CceeEEEecC---eEEEEEeCCCeEEEEccCCCCCe-EEEEEecCCceEEEEecCCeeEEEEcccc
Confidence 3356666644 25556789999999998753322 2222 2256666666554444433333
No 413
>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []). The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].
Probab=70.66 E-value=52 Score=26.14 Aligned_cols=31 Identities=13% Similarity=0.284 Sum_probs=26.1
Q ss_pred CeeEEEeCCCC-----CeEEEEEeCCCcEEEEEcCC
Q 036314 274 WISACKWHNKS-----WFHLISASYDGKVMLWDLRT 304 (347)
Q Consensus 274 ~v~~v~~s~~~-----~~~l~s~s~D~~i~lwd~~~ 304 (347)
.+.+++|||.| +.+||....++.+.||....
T Consensus 87 ~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~~ 122 (173)
T PF12657_consen 87 QVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPPG 122 (173)
T ss_pred cEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecCC
Confidence 68899999954 46799999999999998653
No 414
>KOG2377 consensus Uncharacterized conserved protein [Function unknown]
Probab=69.81 E-value=80 Score=29.41 Aligned_cols=60 Identities=10% Similarity=0.061 Sum_probs=41.4
Q ss_pred CCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccce----eecCCCCeEEEEeecCCCEEE
Q 036314 270 SHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLS----VIDSHKDKVLCADWWRGDSVI 330 (347)
Q Consensus 270 ~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~----~~~~h~~~v~~~~~~~~~~l~ 330 (347)
...+.|.++.||+|+. .||.--.|.+|.+++.-.-++.. +.+.....|.+..|.+.+-+|
T Consensus 64 ~d~G~I~SIkFSlDnk-ilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k~~~IlGF~W~~s~e~A 127 (657)
T KOG2377|consen 64 DDKGEIKSIKFSLDNK-ILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTSSTEIA 127 (657)
T ss_pred cCCCceeEEEeccCcc-eEEEEecCceEEEEecCCCchhhHHHHHhccCcceeEEEEEecCeeEE
Confidence 3455899999999985 58888899999999884333222 223334568899996544333
No 415
>PF14727 PHTB1_N: PTHB1 N-terminus
Probab=68.49 E-value=1e+02 Score=28.63 Aligned_cols=146 Identities=11% Similarity=0.065 Sum_probs=73.8
Q ss_pred CCCeEEEEecCCcEEEEECCCCc-e----eeeeeeCeeeEEEEee---C-CCCcEEEEecCCCcEEEEeCCCCCCC----
Q 036314 196 QQETIYSASWDHSVRTWDVEMGK-D----LSDIFCGKALNCIDIG---G-EGSALIAAGGSDPILRIWDPRKPGTS---- 262 (347)
Q Consensus 196 ~~~~l~s~s~dg~v~vwd~~~~~-~----~~~~~~~~~~~~~~~~---~-~~~~~la~~~~d~~i~iwd~~~~~~~---- 262 (347)
....|+.||..|.++||+..... . +...+...++-.+..+ + .+...||. -.-.++.+|.+......
T Consensus 36 ~~d~IivGS~~G~LrIy~P~~~~~~~~~lllE~~l~~PILqv~~G~F~s~~~~~~LaV-LhP~kl~vY~v~~~~g~~~~g 114 (418)
T PF14727_consen 36 GSDKIIVGSYSGILRIYDPSGNEFQPEDLLLETQLKDPILQVECGKFVSGSEDLQLAV-LHPRKLSVYSVSLVDGTVEHG 114 (418)
T ss_pred CccEEEEeccccEEEEEccCCCCCCCccEEEEEecCCcEEEEEeccccCCCCcceEEE-ecCCEEEEEEEEecCCCcccC
Confidence 34679999999999999985433 1 1222234455555443 1 12233443 33566777766321110
Q ss_pred --CCeEEecCCC-C---C-eeEEEeC-CCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeecC-CCEEEEcc
Q 036314 263 --APVFQFSSHN-S---W-ISACKWH-NKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGG 333 (347)
Q Consensus 263 --~~~~~~~~h~-~---~-v~~v~~s-~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~s 333 (347)
..+..+..|. . + ...--|- ..+..+|..=|.||++.+++-+.......+.+ ---.-.+.|.+ .+.|++++
T Consensus 115 ~~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~f~~~lp~-~llPgPl~Y~~~tDsfvt~s 193 (418)
T PF14727_consen 115 NQYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFAFSRFLPD-FLLPGPLCYCPRTDSFVTAS 193 (418)
T ss_pred cEEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEEEEEEcCC-CCCCcCeEEeecCCEEEEec
Confidence 0011111111 1 0 1111121 12245688889999999999876332222222 11112355643 44677777
Q ss_pred CCceEEEeec
Q 036314 334 VDSKLCVSSG 343 (347)
Q Consensus 334 ~D~~v~vw~~ 343 (347)
.+..|.-++.
T Consensus 194 ss~~l~~Yky 203 (418)
T PF14727_consen 194 SSWTLECYKY 203 (418)
T ss_pred CceeEEEecH
Confidence 7777766653
No 416
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=68.34 E-value=1.4e+02 Score=30.07 Aligned_cols=90 Identities=14% Similarity=0.259 Sum_probs=46.1
Q ss_pred ceEEEEEeCCCCEEEEeeCCCcEEEEecCCC-CCCCccceeeeccCCCccccccc-cccccccccCCccceEEEEeC---
Q 036314 121 SVHSIAAETSGNMVCSGSWDCTISLWRTNDS-DAAGNQVSIKKRKGNNQVEEPQL-EGEAISTLVGHTQCVSSVVWP--- 195 (347)
Q Consensus 121 ~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~h~~~v~~~~~~--- 195 (347)
.|..|.++++|++++-.|..|.+-+ .+... ...+.. . .+.....+... -+..+ -...+...|..+.|.
T Consensus 86 ~v~~i~~n~~g~~lal~G~~~v~V~-~LP~r~g~~~~~---~--~g~~~i~Crt~~v~~~~-~~~~~~~~i~qv~WhP~s 158 (717)
T PF10168_consen 86 EVHQISLNPTGSLLALVGPRGVVVL-ELPRRWGKNGEF---E--DGKKEINCRTVPVDERF-FTSNSSLEIKQVRWHPWS 158 (717)
T ss_pred eEEEEEECCCCCEEEEEcCCcEEEE-EeccccCccccc---c--CCCcceeEEEEEechhh-ccCCCCceEEEEEEcCCC
Confidence 4778889999998887777655444 34321 000000 0 00000000000 00000 012334567788884
Q ss_pred -CCCeEEEEecCCcEEEEECCCC
Q 036314 196 -QQETIYSASWDHSVRTWDVEMG 217 (347)
Q Consensus 196 -~~~~l~s~s~dg~v~vwd~~~~ 217 (347)
.+..|+.-..|+++|+||+...
T Consensus 159 ~~~~~l~vLtsdn~lR~y~~~~~ 181 (717)
T PF10168_consen 159 ESDSHLVVLTSDNTLRLYDISDP 181 (717)
T ss_pred CCCCeEEEEecCCEEEEEecCCC
Confidence 2456777788999999998643
No 417
>KOG4499 consensus Ca2+-binding protein Regucalcin/SMP30 [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=68.18 E-value=73 Score=26.88 Aligned_cols=39 Identities=15% Similarity=0.004 Sum_probs=32.0
Q ss_pred eEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeec
Q 036314 286 FHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWW 324 (347)
Q Consensus 286 ~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~ 324 (347)
.+.+++=..++|...|..+|+.+.++.--+..++|++|-
T Consensus 224 ~L~Va~~ng~~V~~~dp~tGK~L~eiklPt~qitsccFg 262 (310)
T KOG4499|consen 224 NLYVATFNGGTVQKVDPTTGKILLEIKLPTPQITSCCFG 262 (310)
T ss_pred cEEEEEecCcEEEEECCCCCcEEEEEEcCCCceEEEEec
Confidence 345555567899999999999999887778899999995
No 418
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=68.17 E-value=86 Score=27.71 Aligned_cols=104 Identities=13% Similarity=0.136 Sum_probs=62.9
Q ss_pred eeEEEEeeCCCCcEEEEecCCCcEEEEeCCC-CCCC---CCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCC-cEEEEEc
Q 036314 228 ALNCIDIGGEGSALIAAGGSDPILRIWDPRK-PGTS---APVFQFSSHNSWISACKWHNKSWFHLISASYDG-KVMLWDL 302 (347)
Q Consensus 228 ~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~-~~~~---~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~-~i~lwd~ 302 (347)
..+.++|+|++..+..+=+..+.|+-|++.. .... .....+..+.+.-..++...+|.... ++-.+| .|.+|+.
T Consensus 164 ~~NGla~SpDg~tly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~-~a~~~g~~v~~~~p 242 (307)
T COG3386 164 IPNGLAFSPDGKTLYVADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWV-AAVWGGGRVVRFNP 242 (307)
T ss_pred ecCceEECCCCCEEEEEeCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEE-ecccCCceEEEECC
Confidence 4577899888877777777778899888752 1111 11122222233344455555664322 333443 8999999
Q ss_pred CCCccceeecCCCCeEEEEeec-C-CC-EEEEcc
Q 036314 303 RTAWPLSVIDSHKDKVLCADWW-R-GD-SVISGG 333 (347)
Q Consensus 303 ~~~~~~~~~~~h~~~v~~~~~~-~-~~-~l~s~s 333 (347)
+ ++.+..+.-....+.+++|- + .+ .++|+.
T Consensus 243 d-G~l~~~i~lP~~~~t~~~FgG~~~~~L~iTs~ 275 (307)
T COG3386 243 D-GKLLGEIKLPVKRPTNPAFGGPDLNTLYITSA 275 (307)
T ss_pred C-CcEEEEEECCCCCCccceEeCCCcCEEEEEec
Confidence 8 88888777665678889994 3 33 345444
No 419
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=68.08 E-value=99 Score=28.40 Aligned_cols=179 Identities=13% Similarity=0.143 Sum_probs=82.4
Q ss_pred CcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCC-----------cEEEEecCCCCCCCccc
Q 036314 90 QTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDC-----------TISLWRTNDSDAAGNQV 158 (347)
Q Consensus 90 g~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg-----------~I~iwd~~~~~~~~~~~ 158 (347)
.+++++|+.+++.+. ..+... .-..+.|.++++.|+-...|. .|..|++.+.....
T Consensus 150 ~~l~v~Dl~tg~~l~--------d~i~~~--~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v~~~~~gt~~~~d--- 216 (414)
T PF02897_consen 150 YTLRVFDLETGKFLP--------DGIENP--KFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQVYRHKLGTPQSED--- 216 (414)
T ss_dssp EEEEEEETTTTEEEE--------EEEEEE--ESEEEEECTTSSEEEEEECSTTTSS-CCGCCEEEEEEETTS-GGG----
T ss_pred EEEEEEECCCCcCcC--------Cccccc--ccceEEEeCCCCEEEEEEeCcccccccCCCCcEEEEEECCCChHhC---
Confidence 469999998875431 112111 112389999988776554333 26666665432100
Q ss_pred eeeeccCCCccccccccccccccccCCccceEEEEe-CCCCeEEE-EecCC---cEEEEECCCC----ceeeeeeeC-ee
Q 036314 159 SIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYS-ASWDH---SVRTWDVEMG----KDLSDIFCG-KA 228 (347)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s-~s~dg---~v~vwd~~~~----~~~~~~~~~-~~ 228 (347)
..+..-..+......+.. .++++|+. ..... .+.+.|+..+ .....+... ..
T Consensus 217 ------------------~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~~~~~ 278 (414)
T PF02897_consen 217 ------------------ELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSPREDG 278 (414)
T ss_dssp ------------------EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEESSSS
T ss_pred ------------------eeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeCCCCc
Confidence 011111111111333444 46666543 33222 3667777664 222333221 12
Q ss_pred e-EEEEeeCCCCcEEE-Ee--cCCCcEEEEeCCCCCCCCCeEEecCCCCC--eeEEEeCCCCCeEEEEEeCCC--cEEEE
Q 036314 229 L-NCIDIGGEGSALIA-AG--GSDPILRIWDPRKPGTSAPVFQFSSHNSW--ISACKWHNKSWFHLISASYDG--KVMLW 300 (347)
Q Consensus 229 ~-~~~~~~~~~~~~la-~~--~~d~~i~iwd~~~~~~~~~~~~~~~h~~~--v~~v~~s~~~~~~l~s~s~D~--~i~lw 300 (347)
. ..+... +..+++ +. ...+.|.-.++..+........+..|... +..+... +.++++.--.++ .|+++
T Consensus 279 ~~~~v~~~--~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~~--~~~Lvl~~~~~~~~~l~v~ 354 (414)
T PF02897_consen 279 VEYYVDHH--GDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDVSLF--KDYLVLSYRENGSSRLRVY 354 (414)
T ss_dssp -EEEEEEE--TTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEEEEE--TTEEEEEEEETTEEEEEEE
T ss_pred eEEEEEcc--CCEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCceeEEEEEEE--CCEEEEEEEECCccEEEEE
Confidence 2 222222 333333 32 23466666777654321112245556553 4555443 446677776665 57888
Q ss_pred EcC
Q 036314 301 DLR 303 (347)
Q Consensus 301 d~~ 303 (347)
|+.
T Consensus 355 ~~~ 357 (414)
T PF02897_consen 355 DLD 357 (414)
T ss_dssp ETT
T ss_pred ECC
Confidence 998
No 420
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=68.07 E-value=1.4e+02 Score=30.03 Aligned_cols=36 Identities=11% Similarity=0.147 Sum_probs=29.5
Q ss_pred ccccceEEEEEeCC---CCEEEEeeCCCcEEEEecCCCC
Q 036314 117 GHKASVHSIAAETS---GNMVCSGSWDCTISLWRTNDSD 152 (347)
Q Consensus 117 ~h~~~V~~v~~s~~---~~~l~sgs~Dg~I~iwd~~~~~ 152 (347)
.+...|..+.|+|. +..|+.=..|+++|+||+.+..
T Consensus 144 ~~~~~i~qv~WhP~s~~~~~l~vLtsdn~lR~y~~~~~~ 182 (717)
T PF10168_consen 144 NSSLEIKQVRWHPWSESDSHLVVLTSDNTLRLYDISDPQ 182 (717)
T ss_pred CCCceEEEEEEcCCCCCCCeEEEEecCCEEEEEecCCCC
Confidence 34567889999987 4788888999999999997544
No 421
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=66.48 E-value=55 Score=24.85 Aligned_cols=100 Identities=13% Similarity=0.133 Sum_probs=56.6
Q ss_pred eEEEEecCCcEEEEECCCC--------ceeeeeeeCeeeEEEEeeC----CCCcEEEEecCCCcEEEEeCCCCCCCCCeE
Q 036314 199 TIYSASWDHSVRTWDVEMG--------KDLSDIFCGKALNCIDIGG----EGSALIAAGGSDPILRIWDPRKPGTSAPVF 266 (347)
Q Consensus 199 ~l~s~s~dg~v~vwd~~~~--------~~~~~~~~~~~~~~~~~~~----~~~~~la~~~~d~~i~iwd~~~~~~~~~~~ 266 (347)
-|++++.-|+|-|++.... ..+..+...+.+++++..+ .+...|+.|+ ...+-.||...... ++
T Consensus 12 cL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LNin~~italaaG~l~~~~~~D~LliGt-~t~llaYDV~~N~d---~F 87 (136)
T PF14781_consen 12 CLACATTGGKVFIHNPHERGQRTGRQDSDISFLNINQEITALAAGRLKPDDGRDCLLIGT-QTSLLAYDVENNSD---LF 87 (136)
T ss_pred eEEEEecCCEEEEECCCccccccccccCceeEEECCCceEEEEEEecCCCCCcCEEEEec-cceEEEEEcccCch---hh
Confidence 4666677778888875422 2344455566777776554 2344666665 56788999875322 22
Q ss_pred EecCCCCCeeEEEeC---CCCCeEEEEEeCCCcEEEEEcCC
Q 036314 267 QFSSHNSWISACKWH---NKSWFHLISASYDGKVMLWDLRT 304 (347)
Q Consensus 267 ~~~~h~~~v~~v~~s---~~~~~~l~s~s~D~~i~lwd~~~ 304 (347)
. ..-.+.|+++.+- .... -|+-.+.+..|.-+|...
T Consensus 88 y-ke~~DGvn~i~~g~~~~~~~-~l~ivGGncsi~Gfd~~G 126 (136)
T PF14781_consen 88 Y-KEVPDGVNAIVIGKLGDIPS-PLVIVGGNCSIQGFDYEG 126 (136)
T ss_pred h-hhCccceeEEEEEecCCCCC-cEEEECceEEEEEeCCCC
Confidence 2 1223556666552 1111 244455556676666653
No 422
>KOG1916 consensus Nuclear protein, contains WD40 repeats [General function prediction only]
Probab=66.09 E-value=10 Score=37.96 Aligned_cols=156 Identities=14% Similarity=0.121 Sum_probs=79.4
Q ss_pred cCCccceEEEEeCCC--CeEEEEecCCcEEEEECC--CCceeeeee------eCeeeEEEEeeC--CCCcEEEEecCCCc
Q 036314 183 VGHTQCVSSVVWPQQ--ETIYSASWDHSVRTWDVE--MGKDLSDIF------CGKALNCIDIGG--EGSALIAAGGSDPI 250 (347)
Q Consensus 183 ~~h~~~v~~~~~~~~--~~l~s~s~dg~v~vwd~~--~~~~~~~~~------~~~~~~~~~~~~--~~~~~la~~~~d~~ 250 (347)
++..+.|-.+.|+.. ..+. -.-|.+-|||+. .|+....+. .+..+.-+.+.+ .+...+..+-.++.
T Consensus 129 kgf~G~v~dl~fah~~~pk~~--~~vg~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V~wcp~~~~~~~ic~~~~~~~ 206 (1283)
T KOG1916|consen 129 KGFPGGVGDLQFAHTKCPKGR--RLVGELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLVSWCPIAVNKVYICYGLKGGE 206 (1283)
T ss_pred hcCCCCcccccccccCChHHH--HHhhhhheeehHhhccccccceEEeecCcCCCCcceeeecccccccceeeeccCCCc
Confidence 344445556665421 1222 223567788864 233222221 122222233322 12234555666788
Q ss_pred EEEEeCCCCCCCCCeEEecCCCCCeeEEE-----------eCCCCCeEEEEEeCCCcEEEEEcC-----CCccceeecCC
Q 036314 251 LRIWDPRKPGTSAPVFQFSSHNSWISACK-----------WHNKSWFHLISASYDGKVMLWDLR-----TAWPLSVIDSH 314 (347)
Q Consensus 251 i~iwd~~~~~~~~~~~~~~~h~~~v~~v~-----------~s~~~~~~l~s~s~D~~i~lwd~~-----~~~~~~~~~~h 314 (347)
+++.......+ ..+.+|..++..++ .+|||. .+|.++.||.++.|.+- ...++..++.|
T Consensus 207 i~lL~~~ra~~----~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGt-v~a~a~~dG~v~f~Qiyi~g~~~~rclhewkph 281 (1283)
T KOG1916|consen 207 IRLLNINRALR----SLFRSHSQRVTDMAFFAEGVLKLASLSPDGT-VFAWAISDGSVGFYQIYITGKIVHRCLHEWKPH 281 (1283)
T ss_pred eeEeeechHHH----HHHHhcCCCcccHHHHhhchhhheeeCCCCc-EEEEeecCCccceeeeeeeccccHhhhhccCCC
Confidence 88776543211 22334776655443 567774 47788888888777652 12334556666
Q ss_pred CC-eEEEEeecC--------CCE--EEEcc-CCceEEEeeccc
Q 036314 315 KD-KVLCADWWR--------GDS--VISGG-VDSKLCVSSGVS 345 (347)
Q Consensus 315 ~~-~v~~~~~~~--------~~~--l~s~s-~D~~v~vw~~~~ 345 (347)
.+ +-.|.-|.+ +.+ +++++ ....+++|...+
T Consensus 282 d~~p~vC~lc~~~~~~~v~i~~w~~~Itttd~nre~k~w~~a~ 324 (1283)
T KOG1916|consen 282 DKHPRVCWLCHKQEILVVSIGKWVLRITTTDVNREEKFWAEAP 324 (1283)
T ss_pred CCCCceeeeeccccccCCccceeEEEEecccCCcceeEeeccc
Confidence 63 333433432 332 45544 577799997664
No 423
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=65.38 E-value=93 Score=27.10 Aligned_cols=95 Identities=14% Similarity=0.185 Sum_probs=50.3
Q ss_pred EEeeCCCCcEEEEecCCC-cEEEEeCCCCCCCC-----CeEEecCCCCCeeEEEeCCCCCeEEEEEeCC-----CcEEEE
Q 036314 232 IDIGGEGSALIAAGGSDP-ILRIWDPRKPGTSA-----PVFQFSSHNSWISACKWHNKSWFHLISASYD-----GKVMLW 300 (347)
Q Consensus 232 ~~~~~~~~~~la~~~~d~-~i~iwd~~~~~~~~-----~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D-----~~i~lw 300 (347)
++++|..+.-++.+-.-| ...+||......+. .-..|-+|.- |||||.+ |...-.| |.|-||
T Consensus 73 i~~~p~~~ravafARrPGtf~~vfD~~~~~~pv~~~s~~~RHfyGHGv------fs~dG~~-LYATEndfd~~rGViGvY 145 (366)
T COG3490 73 IAFHPALPRAVAFARRPGTFAMVFDPNGAQEPVTLVSQEGRHFYGHGV------FSPDGRL-LYATENDFDPNRGVIGVY 145 (366)
T ss_pred eecCCCCcceEEEEecCCceEEEECCCCCcCcEEEecccCceeecccc------cCCCCcE-EEeecCCCCCCCceEEEE
Confidence 344444344444433322 34577775432211 1123445653 8999965 3333222 679999
Q ss_pred EcCCC-ccceeecCCCCeEEEEeec-CCCEEEEcc
Q 036314 301 DLRTA-WPLSVIDSHKDKVLCADWW-RGDSVISGG 333 (347)
Q Consensus 301 d~~~~-~~~~~~~~h~~~v~~~~~~-~~~~l~s~s 333 (347)
|.+.+ +.+..+..|.=.--.|.|. +|..|+.+.
T Consensus 146 d~r~~fqrvgE~~t~GiGpHev~lm~DGrtlvvan 180 (366)
T COG3490 146 DAREGFQRVGEFSTHGIGPHEVTLMADGRTLVVAN 180 (366)
T ss_pred ecccccceecccccCCcCcceeEEecCCcEEEEeC
Confidence 99865 3355666665444556664 566655443
No 424
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=64.81 E-value=38 Score=27.98 Aligned_cols=44 Identities=11% Similarity=0.191 Sum_probs=31.8
Q ss_pred cCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEe
Q 036314 246 GSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISAS 292 (347)
Q Consensus 246 ~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s 292 (347)
....+|.+|++.. +...+..+|+ --+.|..+.++..|.+ |+|--
T Consensus 35 ~~g~~Vev~~l~~-~~~~~~~~F~-Tv~~V~~l~y~~~GDY-lvTlE 78 (215)
T PF14761_consen 35 ASGCKVEVYDLEQ-EECPLLCTFS-TVGRVLQLVYSEAGDY-LVTLE 78 (215)
T ss_pred cCCCEEEEEEccc-CCCceeEEEc-chhheeEEEeccccce-EEEEE
Confidence 4568899999983 3344566775 3478999999999876 77654
No 425
>smart00564 PQQ beta-propeller repeat. Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.
Probab=62.78 E-value=17 Score=19.29 Aligned_cols=23 Identities=30% Similarity=0.420 Sum_probs=18.6
Q ss_pred CeEEEEecCCcEEEEECCCCcee
Q 036314 198 ETIYSASWDHSVRTWDVEMGKDL 220 (347)
Q Consensus 198 ~~l~s~s~dg~v~vwd~~~~~~~ 220 (347)
..++.++.++.+..+|.++|+.+
T Consensus 7 ~~v~~~~~~g~l~a~d~~~G~~~ 29 (33)
T smart00564 7 GTVYVGSTDGTLYALDAKTGEIL 29 (33)
T ss_pred CEEEEEcCCCEEEEEEcccCcEE
Confidence 46778888999999999887654
No 426
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=62.42 E-value=21 Score=18.55 Aligned_cols=25 Identities=20% Similarity=0.474 Sum_probs=18.5
Q ss_pred eEEEEEeCCCCEEEEeeCCCcEEEE
Q 036314 122 VHSIAAETSGNMVCSGSWDCTISLW 146 (347)
Q Consensus 122 V~~v~~s~~~~~l~sgs~Dg~I~iw 146 (347)
...++++++|+.+++-+....|+++
T Consensus 4 P~gvav~~~g~i~VaD~~n~rV~vf 28 (28)
T PF01436_consen 4 PHGVAVDSDGNIYVADSGNHRVQVF 28 (28)
T ss_dssp EEEEEEETTSEEEEEECCCTEEEEE
T ss_pred CcEEEEeCCCCEEEEECCCCEEEEC
Confidence 3567888888888887777777664
No 427
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=62.04 E-value=11 Score=36.19 Aligned_cols=27 Identities=30% Similarity=0.690 Sum_probs=23.3
Q ss_pred CCCeEEEEecCCcEEEEECCCCceeee
Q 036314 196 QQETIYSASWDHSVRTWDVEMGKDLSD 222 (347)
Q Consensus 196 ~~~~l~s~s~dg~v~vwd~~~~~~~~~ 222 (347)
+...+++.+.|+++|+||+.++.++..
T Consensus 229 ~~~~l~tl~~D~~LRiW~l~t~~~~~~ 255 (547)
T PF11715_consen 229 DDTFLFTLSRDHTLRIWSLETGQCLAT 255 (547)
T ss_dssp TTTEEEEEETTSEEEEEETTTTCEEEE
T ss_pred CCCEEEEEeCCCeEEEEECCCCeEEEE
Confidence 567889999999999999999988544
No 428
>PF01731 Arylesterase: Arylesterase; InterPro: IPR002640 The serum paraoxonases/arylesterases are enzymes that catalyse the hydrolysis of the toxic metabolites of a variety of organophosphorus insecticides. The enzymes hydrolyse a broad spectrum of organophosphate substrates, including paraoxon and a number of aromatic carboxylic acid esters (e.g., phenyl acetate), and hence confer resistance to organophosphate toxicity []. Mammals have 3 distinct paraoxonase types, termed PON1-3 [, ]. In mice and humans, the PON genes are found on the same chromosome in close proximity. PON activity has been found in variety of tissues, with highest levels in liver and serum - the source of serum PON is thought to be the liver. Unlike mammals, fish and avian species lack paraoxonase activity. Human and rabbit PONs appear to have two distinct Ca2+ binding sites, one required for stability and one required for catalytic activity. The Ca2+ dependency of PONs suggests a mechanism of hydrolysis where Ca2+ acts as the electrophillic catalyst, like that proposed for phospholipase A2. The paraoxonase enzymes, PON1 and PON3, are high density lipoprotein (HDL)- associated proteins capable of preventing oxidative modification of low density lipoproteins (LPL) []. Although PON2 has oxidative properties, the enzyme does not associate with HDL. Within a given species, PON1, PON2 and PON3 share ~60% amino acid sequence identity, whereas between mammalian species particular PONs (1,2 or 3) share 79-90% identity at the amino acid level. Human PON1 and PON3 share numerous conserved phosphorylation and N-glycosylation sites; however, it is not known whether the PON proteins are modified at these sites, or whether modification at these sites is required for activity in vivo []. This family consists of arylesterases (Also known as serum paraoxonase) 3.1.1.2 from EC. These enzymes hydrolyse organophosphorus esters such as paraoxon and are found in the liver and blood. They confer resistance to organophosphate toxicity []. Human arylesterase (PON1) P27169 from SWISSPROT is associated with HDL and may protect against LDL oxidation [].; GO: 0004064 arylesterase activity
Probab=61.85 E-value=51 Score=22.84 Aligned_cols=32 Identities=6% Similarity=0.157 Sum_probs=25.1
Q ss_pred CCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCC
Q 036314 273 SWISACKWHNKSWFHLISASYDGKVMLWDLRT 304 (347)
Q Consensus 273 ~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~ 304 (347)
..-+.+.++|++.++.++....+.|++++..+
T Consensus 54 ~~aNGI~~s~~~k~lyVa~~~~~~I~vy~~~~ 85 (86)
T PF01731_consen 54 SFANGIAISPDKKYLYVASSLAHSIHVYKRHK 85 (86)
T ss_pred CCCceEEEcCCCCEEEEEeccCCeEEEEEecC
Confidence 34466889999887777777889999998754
No 429
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=61.51 E-value=1.5e+02 Score=28.15 Aligned_cols=63 Identities=14% Similarity=-0.023 Sum_probs=37.4
Q ss_pred CCEEEEEecCCeEEEEcC-CCeEEEEeeccCC------ceE--EEEEeecCCCceEEEEEccCCCcEEEEecccccc
Q 036314 35 PGFILTGCYDNLGRVWKA-GGVCTHILEGHCG------AVS--SVNIIKSDGLKYVTVATASKDQTLRLWKFDAEEL 102 (347)
Q Consensus 35 ~~~l~sg~~d~~i~iw~~-~~~~~~~l~~h~~------~V~--~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~ 102 (347)
++.+..++.|+.+.-.|. .|+.+..+.-... .+. .+.+. + ...++.++.|+.|..+|.++++.
T Consensus 61 ~g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~--~---~~~V~v~~~~g~v~AlD~~TG~~ 132 (488)
T cd00216 61 DGDMYFTTSHSALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYW--D---PRKVFFGTFDGRLVALDAETGKQ 132 (488)
T ss_pred CCEEEEeCCCCcEEEEECCCChhhceeCCCCCccccccccccCCcEEc--c---CCeEEEecCCCeEEEEECCCCCE
Confidence 456677777888888886 4655444332211 010 01111 1 02467788899999999988764
No 430
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=61.50 E-value=1.2e+02 Score=27.18 Aligned_cols=236 Identities=14% Similarity=0.056 Sum_probs=107.9
Q ss_pred CCeEEEEcCCCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccc----
Q 036314 44 DNLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHK---- 119 (347)
Q Consensus 44 d~~i~iw~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~---- 119 (347)
.+...++|+.......+......+....|+|++. .++- -.++.|.+++..+++........ .-..+.|-.
T Consensus 22 ~~~y~i~d~~~~~~~~l~~~~~~~~~~~~sP~g~----~~~~-v~~~nly~~~~~~~~~~~lT~dg-~~~i~nG~~dwvy 95 (353)
T PF00930_consen 22 KGDYYIYDIETGEITPLTPPPPKLQDAKWSPDGK----YIAF-VRDNNLYLRDLATGQETQLTTDG-EPGIYNGVPDWVY 95 (353)
T ss_dssp EEEEEEEETTTTEEEESS-EETTBSEEEE-SSST----EEEE-EETTEEEEESSTTSEEEESES---TTTEEESB--HHH
T ss_pred ceeEEEEecCCCceEECcCCccccccceeecCCC----eeEE-EecCceEEEECCCCCeEEecccc-ceeEEcCccceec
Confidence 4567888876544444444467788899999654 3333 34678999987655321100000 000001100
Q ss_pred -----cceEEEEEeCCCCEEEEeeC-CCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCc---cceE
Q 036314 120 -----ASVHSIAAETSGNMVCSGSW-DCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHT---QCVS 190 (347)
Q Consensus 120 -----~~V~~v~~s~~~~~l~sgs~-Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~---~~v~ 190 (347)
+.-..+-||||++.|+.... +..|+.+.+... .... -.+.
T Consensus 96 eEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~~~-------------------------------~~~~~~yp~~~ 144 (353)
T PF00930_consen 96 EEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLPDY-------------------------------SPPDSQYPEVE 144 (353)
T ss_dssp HHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEEEE-------------------------------SSSTESS-EEE
T ss_pred cccccccccceEECCCCCEEEEEEECCcCCceEEeecc-------------------------------CCccccCCccc
Confidence 11135779999998875533 334444432210 0000 0233
Q ss_pred EEEeC-CCCeEEEEecCCcEEEEECCCCceee-eee-----eCeeeEEEEeeCCCCcEEEEe-cCC---CcEEEEeCCCC
Q 036314 191 SVVWP-QQETIYSASWDHSVRTWDVEMGKDLS-DIF-----CGKALNCIDIGGEGSALIAAG-GSD---PILRIWDPRKP 259 (347)
Q Consensus 191 ~~~~~-~~~~l~s~s~dg~v~vwd~~~~~~~~-~~~-----~~~~~~~~~~~~~~~~~la~~-~~d---~~i~iwd~~~~ 259 (347)
.+.+| .|...... .+.|+|+++++... ... ....+..+.|.+++..+++.- ..+ ..+.++|....
T Consensus 145 ~~~YPk~G~~np~v----~l~v~~~~~~~~~~~~~~~~~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg 220 (353)
T PF00930_consen 145 SIRYPKAGDPNPRV----SLFVVDLASGKTTELDPPNSLNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTG 220 (353)
T ss_dssp EEE--BTTS---EE----EEEEEESSSTCCCEE---HHHHTSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTT
T ss_pred ccccCCCCCcCCce----EEEEEECCCCcEEEeeeccccCCCccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCC
Confidence 44444 22222111 46678887775421 111 123456677766554233332 222 24445565432
Q ss_pred CCCCCeEEecCCCCCe---eEEEeC-CCCCeEEEEEeCCCcEEEE--EcCCCccceeecCCCCeEEEEee
Q 036314 260 GTSAPVFQFSSHNSWI---SACKWH-NKSWFHLISASYDGKVMLW--DLRTAWPLSVIDSHKDKVLCADW 323 (347)
Q Consensus 260 ~~~~~~~~~~~h~~~v---~~v~~s-~~~~~~l~s~s~D~~i~lw--d~~~~~~~~~~~~h~~~v~~~~~ 323 (347)
. ...+ .-.....|| ....|. +++..+|.....||.-+|+ +...+. ...+....-.|..+..
T Consensus 221 ~-~~~~-~~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G~~hly~~~~~~~~-~~~lT~G~~~V~~i~~ 287 (353)
T PF00930_consen 221 E-TRVV-LEETSDGWVDVYDPPHFLGPDGNEFLWISERDGYRHLYLYDLDGGK-PRQLTSGDWEVTSILG 287 (353)
T ss_dssp T-CEEE-EEEESSSSSSSSSEEEE-TTTSSEEEEEEETTSSEEEEEEETTSSE-EEESS-SSS-EEEEEE
T ss_pred c-eeEE-EEecCCcceeeecccccccCCCCEEEEEEEcCCCcEEEEEcccccc-eeccccCceeecccce
Confidence 1 1111 122233444 245554 7777777777788866655 554443 3445444556655443
No 431
>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]
Probab=60.91 E-value=74 Score=29.58 Aligned_cols=171 Identities=11% Similarity=0.038 Sum_probs=86.7
Q ss_pred ccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeCC
Q 036314 117 GHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQ 196 (347)
Q Consensus 117 ~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 196 (347)
.--..|..+-..|||+.++.-+. .++.++++.+.....+... . ...........+.++- ...
T Consensus 218 ~~~~~v~qllL~Pdg~~LYv~~g-~~~~v~~L~~r~l~~rkl~-~----dspg~~~~~Vte~l~l------------L~G 279 (733)
T COG4590 218 VPFSDVSQLLLTPDGKTLYVRTG-SELVVALLDKRSLQIRKLV-D----DSPGDSRHQVTEQLYL------------LSG 279 (733)
T ss_pred CCccchHhhEECCCCCEEEEecC-CeEEEEeecccccchhhhh-h----cCCCchHHHHHHHHHH------------HhC
Confidence 33455667778999998875544 6788888765432211100 0 0000000000000000 124
Q ss_pred CCeEEEEecCCcEEEE-ECCCCcee--eeee---e-CeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEec
Q 036314 197 QETIYSASWDHSVRTW-DVEMGKDL--SDIF---C-GKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFS 269 (347)
Q Consensus 197 ~~~l~s~s~dg~v~vw-d~~~~~~~--~~~~---~-~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~ 269 (347)
+..++.++.||-|.-| |++.+... +.+. . +.++..+.- ....+-+++-...|++.++-..... + .-++
T Consensus 280 g~SLLv~~~dG~vsQWFdvr~~~~p~l~h~R~f~l~pa~~~~l~p-e~~rkgF~~l~~~G~L~~f~st~~~---~-lL~~ 354 (733)
T COG4590 280 GFSLLVVHEDGLVSQWFDVRRDGQPHLNHIRNFKLAPAEVQFLLP-ETNRKGFYSLYRNGTLQSFYSTSEK---L-LLFE 354 (733)
T ss_pred ceeEEEEcCCCceeeeeeeecCCCCcceeeeccccCcccceeecc-ccccceEEEEcCCCceeeeecccCc---c-eehh
Confidence 4568888999998876 66543221 1111 1 112221211 2233445666677888777643211 1 1112
Q ss_pred CCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeec
Q 036314 270 SHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVID 312 (347)
Q Consensus 270 ~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~ 312 (347)
.--+...-+++||.+.+ |++ -..|.|+++.+++..+..++.
T Consensus 355 ~~~~~~~~~~~Sp~~~~-Ll~-e~~gki~~~~l~Nr~Peisws 395 (733)
T COG4590 355 RAYQAPQLVAMSPNQAY-LLS-EDQGKIRLAQLENRNPEISWS 395 (733)
T ss_pred hhhcCcceeeeCcccch-hee-ecCCceEEEEecCCCCCccHH
Confidence 22224455789998865 443 345789999998776655544
No 432
>KOG3522 consensus Predicted guanine nucleotide exchange factor [Signal transduction mechanisms]
Probab=60.84 E-value=59 Score=32.54 Aligned_cols=150 Identities=10% Similarity=-0.004 Sum_probs=80.7
Q ss_pred CCCCEEEEEecCCeEEEEcCC-C---eEEE-EeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCcc
Q 036314 33 SNPGFILTGCYDNLGRVWKAG-G---VCTH-ILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPK 107 (347)
Q Consensus 33 ~~~~~l~sg~~d~~i~iw~~~-~---~~~~-~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~ 107 (347)
++--.+..|+.++.+-++... + .+.. .+..-...+.++.+++. .+..|.-||++-.+-...... -..+
T Consensus 545 s~~PTic~gtq~ssisissss~~s~ke~~~~~~spe~~~v~~l~~ss~------Slgagl~dgt~a~y~rap~gS-wd~e 617 (925)
T KOG3522|consen 545 SPHPTICLGTQTSSISISSSSLDSIKEVTSEPPSPEHESVKLLLFSSG------SLGAGLIDGTLAVYGRAPSGS-WDGE 617 (925)
T ss_pred CCCCcccccCccceeEEeeccCCcccceeccCCCCchhhhhhhhcccc------ccccCccCCccccccCCCCCC-CCCC
Confidence 333357778888888888632 1 1222 22223345666666542 255677777777765432110 0000
Q ss_pred ccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCcc
Q 036314 108 KIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQ 187 (347)
Q Consensus 108 ~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 187 (347)
+...+.--..+|.+.+|..| ++-++.||.|.++...+....+ .......|-.
T Consensus 618 ---p~~~~~~g~lPvrsla~~ed---~~was~gG~V~vi~~tt~~~~~----------------------~leahqee~~ 669 (925)
T KOG3522|consen 618 ---PNISIPTGSLPVRSLAFQED---FVWASEGGCVHVIPSTTFIRSW----------------------DLEAHQEEAH 669 (925)
T ss_pred ---CccccccCCccccchhhhhc---eeeeecCCceEEEechhccccc----------------------hhHHHHhhcc
Confidence 11112223567888887644 4557889999999876532110 0111223445
Q ss_pred ceEEEEeCCCCeEEEEecCCcEEEEECCCC
Q 036314 188 CVSSVVWPQQETIYSASWDHSVRTWDVEMG 217 (347)
Q Consensus 188 ~v~~~~~~~~~~l~s~s~dg~v~vwd~~~~ 217 (347)
.|+.+.+.+.+..++-.....+++++.++-
T Consensus 670 ~Vthm~~~~~gVwvafasG~~~rlfhtetl 699 (925)
T KOG3522|consen 670 SVTHMLYLDNGVWVAFASGDEERLFHTETL 699 (925)
T ss_pred eEEEEEeeCCceEEEEcCCCEEEEeccccc
Confidence 677777766555444444446777665543
No 433
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=59.85 E-value=1e+02 Score=28.61 Aligned_cols=110 Identities=13% Similarity=0.180 Sum_probs=49.0
Q ss_pred ecCCeEEEEcCC-CeEEEEee-ccCC-ceEEEEEeecCCCceEEEEEccCCCcEEEEec-ccccc-----ccCccc----
Q 036314 42 CYDNLGRVWKAG-GVCTHILE-GHCG-AVSSVNIIKSDGLKYVTVATASKDQTLRLWKF-DAEEL-----VNHPKK---- 108 (347)
Q Consensus 42 ~~d~~i~iw~~~-~~~~~~l~-~h~~-~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~-~~~~~-----~~~~~~---- 108 (347)
-+..++.+||.. .+.++++. +.++ .+..|+|..+.....-+ +.+.-.++|-.|-. +.++- +..+..
T Consensus 219 ~yG~~l~vWD~~~r~~~Q~idLg~~g~~pLEvRflH~P~~~~gF-vg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~ 297 (461)
T PF05694_consen 219 KYGHSLHVWDWSTRKLLQTIDLGEEGQMPLEVRFLHDPDANYGF-VGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEG 297 (461)
T ss_dssp -S--EEEEEETTTTEEEEEEES-TTEEEEEEEEE-SSTT--EEE-EEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--S
T ss_pred cccCeEEEEECCCCcEeeEEecCCCCCceEEEEecCCCCccceE-EEEeccceEEEEEEcCCCCeeeeEEEECCCcccCc
Confidence 346789999975 44555544 3333 46788887655433333 33334445555533 22211 000000
Q ss_pred c---ceeeeeeccccceEEEEEeCCCCEEEEee-CCCcEEEEecCCCC
Q 036314 109 I---RSFKILRGHKASVHSIAAETSGNMVCSGS-WDCTISLWRTNDSD 152 (347)
Q Consensus 109 ~---~~~~~~~~h~~~V~~v~~s~~~~~l~sgs-~Dg~I~iwd~~~~~ 152 (347)
+ ..++.+..-..-|+.+.+|.|.++|+.+. .+|.||.||+.++.
T Consensus 298 ~~lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~W~~GdvrqYDISDP~ 345 (461)
T PF05694_consen 298 WILPEMLKPFGAVPPLITDILISLDDRFLYVSNWLHGDVRQYDISDPF 345 (461)
T ss_dssp S---GGGGGG-EE------EEE-TTS-EEEEEETTTTEEEEEE-SSTT
T ss_pred ccccccccccccCCCceEeEEEccCCCEEEEEcccCCcEEEEecCCCC
Confidence 0 00001111123468889999999887555 58999999998764
No 434
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family. PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.
Probab=59.64 E-value=1.6e+02 Score=27.76 Aligned_cols=52 Identities=6% Similarity=-0.171 Sum_probs=30.0
Q ss_pred CceeeccCCCC-CEEEEEecCCeEEEEcCCCe---EEEEe----e-ccCCceEEEEEeecC
Q 036314 25 DWVSAVDGSNP-GFILTGCYDNLGRVWKAGGV---CTHIL----E-GHCGAVSSVNIIKSD 76 (347)
Q Consensus 25 ~~v~~~~~~~~-~~l~sg~~d~~i~iw~~~~~---~~~~l----~-~h~~~V~~v~~~~~~ 76 (347)
+.-+.+++.++ .+|++--..|+|++++..+. .+..+ . .-++-...|+++|+.
T Consensus 30 ~~Pw~maflPDG~llVtER~~G~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~PdF 90 (454)
T TIGR03606 30 NKPWALLWGPDNQLWVTERATGKILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHPDF 90 (454)
T ss_pred CCceEEEEcCCCeEEEEEecCCEEEEEeCCCCceeeeecCCceeccCCCCceeeEEECCCc
Confidence 34556666644 45555543689999875421 11111 1 125667899999864
No 435
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=58.65 E-value=1.4e+02 Score=26.73 Aligned_cols=113 Identities=6% Similarity=-0.110 Sum_probs=54.4
Q ss_pred eeeccCCC-CCEEEEEecCCeEEEEcCCCeE---EEEe----eccCCceEEEEEeecCCCceEEEEEccCC--------C
Q 036314 27 VSAVDGSN-PGFILTGCYDNLGRVWKAGGVC---THIL----EGHCGAVSSVNIIKSDGLKYVTVATASKD--------Q 90 (347)
Q Consensus 27 v~~~~~~~-~~~l~sg~~d~~i~iw~~~~~~---~~~l----~~h~~~V~~v~~~~~~~~~~~~l~s~s~D--------g 90 (347)
-+++++.+ +.+++ +-..|+|++.+..+.. +..+ .........++++|+-..+....+..+.. .
T Consensus 4 P~~~a~~pdG~l~v-~e~~G~i~~~~~~g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~~~~~ 82 (331)
T PF07995_consen 4 PRSMAFLPDGRLLV-AERSGRIWVVDKDGSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGGDNDN 82 (331)
T ss_dssp EEEEEEETTSCEEE-EETTTEEEEEETTTEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSSSEEE
T ss_pred ceEEEEeCCCcEEE-EeCCceEEEEeCCCcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCCCcce
Confidence 35667664 44555 4569999999855543 2222 23345678999998533333333333321 2
Q ss_pred cEEEEeccccccccCccccc-eeeeeec---cccceEEEEEeCCCCEEEEeeCCCc
Q 036314 91 TLRLWKFDAEELVNHPKKIR-SFKILRG---HKASVHSIAAETSGNMVCSGSWDCT 142 (347)
Q Consensus 91 ~v~~wd~~~~~~~~~~~~~~-~~~~~~~---h~~~V~~v~~s~~~~~l~sgs~Dg~ 142 (347)
.|.-|.+..+... ....+ .+..+.. ....-..++|.|||.+.++.+..+.
T Consensus 83 ~v~r~~~~~~~~~--~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs~G~~~~ 136 (331)
T PF07995_consen 83 RVVRFTLSDGDGD--LSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVSVGDGGN 136 (331)
T ss_dssp EEEEEEEETTSCE--EEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEEEB-TTT
T ss_pred eeEEEeccCCccc--cccceEEEEEeCCCCCCCCCCccccCCCCCcEEEEeCCCCC
Confidence 4444554433000 00011 1111122 2233466999999987777665544
No 436
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=57.04 E-value=1.4e+02 Score=26.36 Aligned_cols=106 Identities=8% Similarity=0.109 Sum_probs=51.2
Q ss_pred CceeeccCC-CCCEEEEEecCCeEEEEcCCC-eEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEecc-ccc
Q 036314 25 DWVSAVDGS-NPGFILTGCYDNLGRVWKAGG-VCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFD-AEE 101 (347)
Q Consensus 25 ~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~~-~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~-~~~ 101 (347)
..+..+..+ ++.+++.++.....+-|+... .....-..-...|.+|.|.+++. |......|.|+.=+.. ..+
T Consensus 145 gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~-----lw~~~~Gg~~~~s~~~~~~~ 219 (302)
T PF14870_consen 145 GSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGN-----LWMLARGGQIQFSDDPDDGE 219 (302)
T ss_dssp --EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS------EEEEETTTEEEEEE-TTEEE
T ss_pred ceeEeEEECCCCcEEEEECcccEEEEecCCCccceEEccCccceehhceecCCCC-----EEEEeCCcEEEEccCCCCcc
Confidence 456665544 556777776666667888653 34444445567899999998643 2223477788776621 111
Q ss_pred cccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCC
Q 036314 102 LVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWD 140 (347)
Q Consensus 102 ~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~D 140 (347)
- .. +....+..-.-.+..++|.+++...++|+..
T Consensus 220 ~---w~--~~~~~~~~~~~~~ld~a~~~~~~~wa~gg~G 253 (302)
T PF14870_consen 220 T---WS--EPIIPIKTNGYGILDLAYRPPNEIWAVGGSG 253 (302)
T ss_dssp E---E-----B-TTSS--S-EEEEEESSSS-EEEEESTT
T ss_pred c---cc--cccCCcccCceeeEEEEecCCCCEEEEeCCc
Confidence 0 00 0000111123347889999888777765544
No 437
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=56.96 E-value=85 Score=23.86 Aligned_cols=111 Identities=18% Similarity=0.224 Sum_probs=55.5
Q ss_pred EEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe----C-C-CCe
Q 036314 126 AAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW----P-Q-QET 199 (347)
Q Consensus 126 ~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~----~-~-~~~ 199 (347)
.|......|+.++.-+.|.|.+.......... ....++.+ .-...|.+++- + + .+.
T Consensus 5 kfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~-----------------~~~~i~~L-Nin~~italaaG~l~~~~~~D~ 66 (136)
T PF14781_consen 5 KFDGVHPCLACATTGGKVFIHNPHERGQRTGR-----------------QDSDISFL-NINQEITALAAGRLKPDDGRDC 66 (136)
T ss_pred EeCCCceeEEEEecCCEEEEECCCcccccccc-----------------ccCceeEE-ECCCceEEEEEEecCCCCCcCE
Confidence 45555556777778888888875432211000 00111111 12345666642 1 2 234
Q ss_pred EEEEecCCcEEEEECCCCceeeeeeeCeeeEEEEee---CCCCcEEEEecCCCcEEEEeC
Q 036314 200 IYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIG---GEGSALIAAGGSDPILRIWDP 256 (347)
Q Consensus 200 l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~---~~~~~~la~~~~d~~i~iwd~ 256 (347)
|+. +...++..||+.....+..-.....++++.+. .....+++.|+ +..|.=||.
T Consensus 67 Lli-Gt~t~llaYDV~~N~d~Fyke~~DGvn~i~~g~~~~~~~~l~ivGG-ncsi~Gfd~ 124 (136)
T PF14781_consen 67 LLI-GTQTSLLAYDVENNSDLFYKEVPDGVNAIVIGKLGDIPSPLVIVGG-NCSIQGFDY 124 (136)
T ss_pred EEE-eccceEEEEEcccCchhhhhhCccceeEEEEEecCCCCCcEEEECc-eEEEEEeCC
Confidence 554 45667999999877655433333445555553 21233444443 455555554
No 438
>PRK10115 protease 2; Provisional
Probab=56.25 E-value=2.2e+02 Score=28.47 Aligned_cols=30 Identities=7% Similarity=0.128 Sum_probs=19.5
Q ss_pred eEEEEEeCCCCEEEEe-----eCCCcEEEEecCCC
Q 036314 122 VHSIAAETSGNMVCSG-----SWDCTISLWRTNDS 151 (347)
Q Consensus 122 V~~v~~s~~~~~l~sg-----s~Dg~I~iwd~~~~ 151 (347)
+..+.++|||++|+-+ +...+|++.|+.++
T Consensus 129 l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg 163 (686)
T PRK10115 129 LGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETG 163 (686)
T ss_pred EeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCC
Confidence 5567789999977633 33344777777543
No 439
>KOG2280 consensus Vacuolar assembly/sorting protein VPS16 [Intracellular trafficking, secretion, and vesicular transport]
Probab=55.47 E-value=2.3e+02 Score=28.35 Aligned_cols=28 Identities=14% Similarity=0.318 Sum_probs=24.9
Q ss_pred ceEEEEeCCCCeEEEEecCCcEEEEECC
Q 036314 188 CVSSVVWPQQETIYSASWDHSVRTWDVE 215 (347)
Q Consensus 188 ~v~~~~~~~~~~l~s~s~dg~v~vwd~~ 215 (347)
.+..+.|++.+.|++...||++.+|++-
T Consensus 85 ~lI~mgWs~~eeLI~v~k~g~v~Vy~~~ 112 (829)
T KOG2280|consen 85 ELIGMGWSDDEELICVQKDGTVHVYGLL 112 (829)
T ss_pred CeeeecccCCceEEEEeccceEEEeecc
Confidence 5677889999999999999999999974
No 440
>PF01011 PQQ: PQQ enzyme repeat family.; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....
Probab=54.14 E-value=26 Score=19.64 Aligned_cols=25 Identities=24% Similarity=0.301 Sum_probs=19.1
Q ss_pred eEEEEecCCcEEEEECCCCceeeee
Q 036314 199 TIYSASWDHSVRTWDVEMGKDLSDI 223 (347)
Q Consensus 199 ~l~s~s~dg~v~vwd~~~~~~~~~~ 223 (347)
.++.++.||.|.-.|.++|+.+=..
T Consensus 2 ~v~~~~~~g~l~AlD~~TG~~~W~~ 26 (38)
T PF01011_consen 2 RVYVGTPDGYLYALDAKTGKVLWKF 26 (38)
T ss_dssp EEEEETTTSEEEEEETTTTSEEEEE
T ss_pred EEEEeCCCCEEEEEECCCCCEEEee
Confidence 3556689999999999999865333
No 441
>KOG1983 consensus Tomosyn and related SNARE-interacting proteins [Intracellular trafficking, secretion, and vesicular transport]
Probab=53.78 E-value=2.9e+02 Score=29.08 Aligned_cols=29 Identities=17% Similarity=0.200 Sum_probs=21.3
Q ss_pred ceeeccCCC-CCEEEEEecCCeEEEEcCCC
Q 036314 26 WVSAVDGSN-PGFILTGCYDNLGRVWKAGG 54 (347)
Q Consensus 26 ~v~~~~~~~-~~~l~sg~~d~~i~iw~~~~ 54 (347)
....++|+. -+++|-|..+|.++++-..+
T Consensus 37 ~~~~~afD~~q~llai~t~tg~i~~yg~~~ 66 (993)
T KOG1983|consen 37 TPSALAFDPTQGLLAIGTRTGAIKIYGQPG 66 (993)
T ss_pred CCcceeeccccceEEEEEecccEEEecccc
Confidence 444556663 46899999999999996544
No 442
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=53.11 E-value=1.6e+02 Score=25.83 Aligned_cols=171 Identities=12% Similarity=0.163 Sum_probs=96.3
Q ss_pred eeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeC
Q 036314 60 LEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSW 139 (347)
Q Consensus 60 l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~ 139 (347)
..|-+..|+++.|.|+.+ .|.+-.+...-.+|=-..|+++.. + .+.+-.+ .-.+.+-.+|+++++-=+
T Consensus 81 i~g~~~nvS~LTynp~~r----tLFav~n~p~~iVElt~~Gdlirt------i-PL~g~~D-pE~Ieyig~n~fvi~dER 148 (316)
T COG3204 81 ILGETANVSSLTYNPDTR----TLFAVTNKPAAIVELTKEGDLIRT------I-PLTGFSD-PETIEYIGGNQFVIVDER 148 (316)
T ss_pred cccccccccceeeCCCcc----eEEEecCCCceEEEEecCCceEEE------e-cccccCC-hhHeEEecCCEEEEEehh
Confidence 445556699999999653 566666666655664444544321 1 1233222 235677788888888888
Q ss_pred CCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCc
Q 036314 140 DCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGK 218 (347)
Q Consensus 140 Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~ 218 (347)
++++.++.+......-.. ... .-.+......+.....++| +.++.|+.+=.-+-+.||.+..+.
T Consensus 149 ~~~l~~~~vd~~t~~~~~---~~~------------~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~ 213 (316)
T COG3204 149 DRALYLFTVDADTTVISA---KVQ------------KIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSP 213 (316)
T ss_pred cceEEEEEEcCCccEEec---cce------------EEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecCC
Confidence 999999877643211000 000 0001111111444567888 456677777777777777765332
Q ss_pred eeeeee------e-----CeeeEEEEeeCCCCcEEEEecCCCcEEEEeCC
Q 036314 219 DLSDIF------C-----GKALNCIDIGGEGSALIAAGGSDPILRIWDPR 257 (347)
Q Consensus 219 ~~~~~~------~-----~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~ 257 (347)
...... . -..+..+.+++..+.+++-+.+++.+--.|..
T Consensus 214 ~~l~~~~~~~~~~~~~~f~~DvSgl~~~~~~~~LLVLS~ESr~l~Evd~~ 263 (316)
T COG3204 214 SSLSVHASLDPTADRDLFVLDVSGLEFNAITNSLLVLSDESRRLLEVDLS 263 (316)
T ss_pred cccccccccCcccccceEeeccccceecCCCCcEEEEecCCceEEEEecC
Confidence 111100 0 11344556666667777778888888777765
No 443
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=52.58 E-value=1.5e+02 Score=25.48 Aligned_cols=181 Identities=11% Similarity=0.043 Sum_probs=88.8
Q ss_pred eEEEEEeCCCCEEEEeeCCC--cEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeCCCCe
Q 036314 122 VHSIAAETSGNMVCSGSWDC--TISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQET 199 (347)
Q Consensus 122 V~~v~~s~~~~~l~sgs~Dg--~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 199 (347)
...+.|..+|.++-|.+.-| .|+.+|+.++...... .+. ..-.-..++.-+++.
T Consensus 47 TQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~-----------------------~l~-~~~FgEGit~~~d~l 102 (264)
T PF05096_consen 47 TQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSV-----------------------PLP-PRYFGEGITILGDKL 102 (264)
T ss_dssp EEEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEE-----------------------E-T-TT--EEEEEEETTEE
T ss_pred CccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEE-----------------------ECC-ccccceeEEEECCEE
Confidence 34577777888888877766 6777887764321100 000 000001111112222
Q ss_pred EEEEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCC---CCee
Q 036314 200 IYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHN---SWIS 276 (347)
Q Consensus 200 l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~---~~v~ 276 (347)
..-.=.++..-+||..+-+.+.++.....-..++. ++..++++ ....+++++|+..-.... ........ ..++
T Consensus 103 ~qLTWk~~~~f~yd~~tl~~~~~~~y~~EGWGLt~--dg~~Li~S-DGS~~L~~~dP~~f~~~~-~i~V~~~g~pv~~LN 178 (264)
T PF05096_consen 103 YQLTWKEGTGFVYDPNTLKKIGTFPYPGEGWGLTS--DGKRLIMS-DGSSRLYFLDPETFKEVR-TIQVTDNGRPVSNLN 178 (264)
T ss_dssp EEEESSSSEEEEEETTTTEEEEEEE-SSS--EEEE--CSSCEEEE--SSSEEEEE-TTT-SEEE-EEE-EETTEE---EE
T ss_pred EEEEecCCeEEEEccccceEEEEEecCCcceEEEc--CCCEEEEE-CCccceEEECCcccceEE-EEEEEECCEECCCcE
Confidence 22223456677899988887777765444444543 44555555 446789999976422111 11111111 2345
Q ss_pred EEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeec------------CC---CCeEEEEeecC--CCEEEEc
Q 036314 277 ACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVID------------SH---KDKVLCADWWR--GDSVISG 332 (347)
Q Consensus 277 ~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~------------~h---~~~v~~~~~~~--~~~l~s~ 332 (347)
.+.|- +| ...|=.=....|-..|..+|+.+..+. .+ .+...+++|.+ +..++||
T Consensus 179 ELE~i-~G-~IyANVW~td~I~~Idp~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTG 249 (264)
T PF05096_consen 179 ELEYI-NG-KIYANVWQTDRIVRIDPETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTG 249 (264)
T ss_dssp EEEEE-TT-EEEEEETTSSEEEEEETTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEEE
T ss_pred eEEEE-cC-EEEEEeCCCCeEEEEeCCCCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEEe
Confidence 55554 23 334444455567777888887655431 01 23446899953 4456665
No 444
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=51.91 E-value=1.8e+02 Score=26.11 Aligned_cols=112 Identities=16% Similarity=0.128 Sum_probs=58.3
Q ss_pred CCeEEEEecCCcEEEEECCCCcee--eeeee-----------CeeeEEEEeeCCCCcEEEE-------ecCCCc--EEEE
Q 036314 197 QETIYSASWDHSVRTWDVEMGKDL--SDIFC-----------GKALNCIDIGGEGSALIAA-------GGSDPI--LRIW 254 (347)
Q Consensus 197 ~~~l~s~s~dg~v~vwd~~~~~~~--~~~~~-----------~~~~~~~~~~~~~~~~la~-------~~~d~~--i~iw 254 (347)
+..++-.+.+|.|.--|+...... ..+.. ......+++++..+++++. ...|+. |-++
T Consensus 195 ~~~~~F~Sy~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~ 274 (342)
T PF06433_consen 195 GGRLYFVSYEGNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLIAYHAASGRLYVLMHQGGEGSHKDPGTEVWVY 274 (342)
T ss_dssp TTEEEEEBTTSEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-EEEETTTTEEEEEEEE--TT-TTS-EEEEEEE
T ss_pred CCeEEEEecCCEEEEEeccCCcccccCcccccCccccccCcCCcceeeeeeccccCeEEEEecCCCCCCccCCceEEEEE
Confidence 345555677787777776544321 11110 0112235555544444332 123333 4444
Q ss_pred eCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEe-CCCcEEEEEcCCCccceeec
Q 036314 255 DPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISAS-YDGKVMLWDLRTAWPLSVID 312 (347)
Q Consensus 255 d~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s-~D~~i~lwd~~~~~~~~~~~ 312 (347)
|+... +.+..+.. ...+.++..+.+...+|.+.+ .++.+.+||..+|+.+.++.
T Consensus 275 D~~t~---krv~Ri~l-~~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~~~~ 329 (342)
T PF06433_consen 275 DLKTH---KRVARIPL-EHPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLVRSIE 329 (342)
T ss_dssp ETTTT---EEEEEEEE-EEEESEEEEESSSS-EEEEEETTTTEEEEEETTT--EEEEE-
T ss_pred ECCCC---eEEEEEeC-CCccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEeehh
Confidence 55432 23444432 234678888887766676654 57999999999998887765
No 445
>PF13570 PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A.
Probab=49.53 E-value=32 Score=19.46 Aligned_cols=21 Identities=14% Similarity=0.224 Sum_probs=15.9
Q ss_pred CCCeEEEEecCCcEEEEECCC
Q 036314 196 QQETIYSASWDHSVRTWDVEM 216 (347)
Q Consensus 196 ~~~~l~s~s~dg~v~vwd~~~ 216 (347)
.+..++.++.||.+..+|.++
T Consensus 20 ~~g~vyv~~~dg~l~ald~~t 40 (40)
T PF13570_consen 20 AGGRVYVGTGDGNLYALDAAT 40 (40)
T ss_dssp CTSEEEEE-TTSEEEEEETT-
T ss_pred ECCEEEEEcCCCEEEEEeCCC
Confidence 456888899999999999763
No 446
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=49.11 E-value=2.5e+02 Score=27.01 Aligned_cols=146 Identities=11% Similarity=0.173 Sum_probs=0.0
Q ss_pred CCCceEEEEEccCCCcEEEEeccccccccCccccc------------------------------eeeeeeccccceE--
Q 036314 76 DGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIR------------------------------SFKILRGHKASVH-- 123 (347)
Q Consensus 76 ~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~------------------------------~~~~~~~h~~~V~-- 123 (347)
++.....|+.+..+|.+.+.|..+++++...+... ....+.+..+.++
T Consensus 311 ~G~~~~~v~~~~K~G~~~vlDr~tG~~i~~~~~~~~~~w~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~Pg~~Gg~~W~ 390 (527)
T TIGR03075 311 DGKPRKLLAHADRNGFFYVLDRTNGKLLSAEPFVDTVNWATGVDLKTGRPIEVPEARSADGKKGKPVGVCPGFLGGKNWQ 390 (527)
T ss_pred CCcEEEEEEEeCCCceEEEEECCCCceeccccccCCcccccccCCCCCCCccChhhCcCCCCCCCeeEECCCCcCCCCCC
Q ss_pred EEEEeCCCCEEEEeeCC---------------------------------CcEEEEecCCCCCCCccceeeeccCCCccc
Q 036314 124 SIAAETSGNMVCSGSWD---------------------------------CTISLWRTNDSDAAGNQVSIKKRKGNNQVE 170 (347)
Q Consensus 124 ~v~~s~~~~~l~sgs~D---------------------------------g~I~iwd~~~~~~~~~~~~~~~~~~~~~~~ 170 (347)
.++++|+..+++....+ +.+.=+|+.+
T Consensus 391 ~~A~Dp~~g~~yvp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~~~g~l~AiD~~t-------------------- 450 (527)
T TIGR03075 391 PMAYSPKTGLFYVPANEVCMDYEPEKVSYKKGAAYLGAGLTIKPPPDDHMGSLIAWDPIT-------------------- 450 (527)
T ss_pred CceECCCCCEEEEecccccccccccccccCCCCceeccccccCCCCCCCceeEEEEeCCC--------------------
Q ss_pred cccccccccccccCCccceEEEEeCCCCeEEEEecCCcEEEEECCCCceeeeeeeCeeeEEEEee--CCCCcEEEEec
Q 036314 171 EPQLEGEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIG--GEGSALIAAGG 246 (347)
Q Consensus 171 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~--~~~~~~la~~~ 246 (347)
++..-..........+...-.+..++.++.||.++++|.++|+.+-....+..+..--+. .++..+++...
T Consensus 451 -----Gk~~W~~~~~~p~~~~~l~t~g~lvf~g~~~G~l~a~D~~TGe~lw~~~~g~~~~a~P~ty~~~G~qYv~~~~ 523 (527)
T TIGR03075 451 -----GKIVWEHKEDFPLWGGVLATAGDLVFYGTLEGYFKAFDAKTGEELWKFKTGSGIVGPPVTYEQDGKQYVAVLS 523 (527)
T ss_pred -----CceeeEecCCCCCCCcceEECCcEEEEECCCCeEEEEECCCCCEeEEEeCCCCceecCEEEEeCCEEEEEEEe
No 447
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=48.85 E-value=2.5e+02 Score=26.82 Aligned_cols=59 Identities=15% Similarity=0.121 Sum_probs=41.7
Q ss_pred cEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcC
Q 036314 240 ALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLR 303 (347)
Q Consensus 240 ~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~ 303 (347)
.++|+++..|-|++||.-. ......+++-.+.|--+....+|...||||-. .+.+-|++
T Consensus 574 GyIa~as~kGDirLyDRig---~rAKtalP~lG~aIk~idvta~Gk~ilaTCk~--yllL~d~~ 632 (776)
T COG5167 574 GYIAAASRKGDIRLYDRIG---KRAKTALPGLGDAIKHIDVTANGKHILATCKN--YLLLTDVP 632 (776)
T ss_pred ceEEEecCCCceeeehhhc---chhhhcCcccccceeeeEeecCCcEEEEeecc--eEEEEecc
Confidence 3789999999999999432 11233556677778888888888877776653 57777754
No 448
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=47.62 E-value=2e+02 Score=25.39 Aligned_cols=79 Identities=13% Similarity=0.197 Sum_probs=40.3
Q ss_pred eEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEE
Q 036314 55 VCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMV 134 (347)
Q Consensus 55 ~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l 134 (347)
...+...+-.+.+..+..++ ++.+++.++.-...+-||--.. .+++.. +.-...|.++.|.+++.+.
T Consensus 135 tW~~~~~~~~gs~~~~~r~~----dG~~vavs~~G~~~~s~~~G~~-------~w~~~~--r~~~~riq~~gf~~~~~lw 201 (302)
T PF14870_consen 135 TWQAVVSETSGSINDITRSS----DGRYVAVSSRGNFYSSWDPGQT-------TWQPHN--RNSSRRIQSMGFSPDGNLW 201 (302)
T ss_dssp SEEEEE-S----EEEEEE-T----TS-EEEEETTSSEEEEE-TT-S-------S-EEEE----SSS-EEEEEE-TTS-EE
T ss_pred CeeEcccCCcceeEeEEECC----CCcEEEEECcccEEEEecCCCc-------cceEEc--cCccceehhceecCCCCEE
Confidence 34455555567777776665 3346666666666677874211 122222 2346779999999998776
Q ss_pred EEeeCCCcEEEEe
Q 036314 135 CSGSWDCTISLWR 147 (347)
Q Consensus 135 ~sgs~Dg~I~iwd 147 (347)
+. .+.|.|+.=+
T Consensus 202 ~~-~~Gg~~~~s~ 213 (302)
T PF14870_consen 202 ML-ARGGQIQFSD 213 (302)
T ss_dssp EE-ETTTEEEEEE
T ss_pred EE-eCCcEEEEcc
Confidence 64 4888887755
No 449
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=46.49 E-value=1.8e+02 Score=24.69 Aligned_cols=76 Identities=13% Similarity=0.211 Sum_probs=43.3
Q ss_pred eeEEEEeeCCCCcEEEEe--cCCCcEEEEeCCCCCCC------CCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEE
Q 036314 228 ALNCIDIGGEGSALIAAG--GSDPILRIWDPRKPGTS------APVFQFSSHNSWISACKWHNKSWFHLISASYDGKVML 299 (347)
Q Consensus 228 ~~~~~~~~~~~~~~la~~--~~d~~i~iwd~~~~~~~------~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~l 299 (347)
.+..+.+++++.++.+.. ..++.|.+--+...... .+..........+.++.|.+++...+++...++.+..
T Consensus 113 ~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~~L~V~~~~~~~~~~~ 192 (253)
T PF10647_consen 113 RITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSDDSTLVVLGRSAGGPVVR 192 (253)
T ss_pred ceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceeeeecCCCEEEEEeCCCCCceeE
Confidence 678899988776654443 33567776654322211 1122222335678999999998644444445554544
Q ss_pred -EEcC
Q 036314 300 -WDLR 303 (347)
Q Consensus 300 -wd~~ 303 (347)
....
T Consensus 193 ~v~~d 197 (253)
T PF10647_consen 193 LVSVD 197 (253)
T ss_pred EEEcc
Confidence 4444
No 450
>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []. These proteins are found in fungi.
Probab=46.43 E-value=3.1e+02 Score=27.86 Aligned_cols=98 Identities=15% Similarity=0.152 Sum_probs=56.5
Q ss_pred CeeeEEEEeeCCCCcEEEEecCCCcEEEEeCC--CCCCCCCeEEecCCC----------CCeeEEEeCCCCCeEEEEEeC
Q 036314 226 GKALNCIDIGGEGSALIAAGGSDPILRIWDPR--KPGTSAPVFQFSSHN----------SWISACKWHNKSWFHLISASY 293 (347)
Q Consensus 226 ~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~--~~~~~~~~~~~~~h~----------~~v~~v~~s~~~~~~l~s~s~ 293 (347)
+.+...++|.|.+...||.-...|...+||+. .............+. +.-..+.|.++... |+.++
T Consensus 145 g~~~aDv~FnP~~~~q~AiVD~~G~Wsvw~i~~~~~~~~~~~~~~~~~~gsi~~d~~e~s~w~rI~W~~~~~~-lLv~~- 222 (765)
T PF10214_consen 145 GFPHADVAFNPWDQRQFAIVDEKGNWSVWDIKGRPKRKSSNLRLSRNISGSIIFDPEELSNWKRILWVSDSNR-LLVCN- 222 (765)
T ss_pred CCccceEEeccCccceEEEEeccCcEEEEEeccccccCCcceeeccCCCccccCCCcccCcceeeEecCCCCE-EEEEc-
Confidence 34566788888777789999999999999992 111111111111111 11236788877655 44444
Q ss_pred CCcEEEEEcCCCccce-ee-cCCCCeEEEEeecC
Q 036314 294 DGKVMLWDLRTAWPLS-VI-DSHKDKVLCADWWR 325 (347)
Q Consensus 294 D~~i~lwd~~~~~~~~-~~-~~h~~~v~~~~~~~ 325 (347)
-..+.++|+++..... .. ....+.++.+.-++
T Consensus 223 r~~l~~~d~~~~~~~~~l~~~~~~~~IlDv~~~~ 256 (765)
T PF10214_consen 223 RSKLMLIDFESNWQTEYLVTAKTWSWILDVKRSP 256 (765)
T ss_pred CCceEEEECCCCCccchhccCCChhheeeEEecC
Confidence 3568899998765533 11 22334566555544
No 451
>PLN00033 photosystem II stability/assembly factor; Provisional
Probab=45.87 E-value=2.5e+02 Score=25.96 Aligned_cols=67 Identities=12% Similarity=0.018 Sum_probs=42.6
Q ss_pred CeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeec---CCCCeEEEEeecCCCEEEEccCCceEEEeec
Q 036314 274 WISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVID---SHKDKVLCADWWRGDSVISGGVDSKLCVSSG 343 (347)
Q Consensus 274 ~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~---~h~~~v~~~~~~~~~~l~s~s~D~~v~vw~~ 343 (347)
.+.++.|.+++. ++.++.+|.+... ...|+.-.... .-....+.+.|.+.+.....+.+|.|.-|.|
T Consensus 329 ~l~~v~~~~d~~--~~a~G~~G~v~~s-~D~G~tW~~~~~~~~~~~~ly~v~f~~~~~g~~~G~~G~il~~~~ 398 (398)
T PLN00033 329 GILDVGYRSKKE--AWAAGGSGILLRS-TDGGKSWKRDKGADNIAANLYSVKFFDDKKGFVLGNDGVLLRYLG 398 (398)
T ss_pred ceEEEEEcCCCc--EEEEECCCcEEEe-CCCCcceeEccccCCCCcceeEEEEcCCCceEEEeCCcEEEEeCC
Confidence 478888987763 6667778877665 34444433222 2235678999865455444577888877754
No 452
>KOG2280 consensus Vacuolar assembly/sorting protein VPS16 [Intracellular trafficking, secretion, and vesicular transport]
Probab=45.42 E-value=3.3e+02 Score=27.30 Aligned_cols=51 Identities=14% Similarity=0.160 Sum_probs=37.5
Q ss_pred CeEEEEcCCCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEecccc
Q 036314 45 NLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAE 100 (347)
Q Consensus 45 ~~i~iw~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~ 100 (347)
..|+|++..|..+..+.-..+++..+.|+.+ ..|+.-..||++++|++...
T Consensus 64 ~~I~If~~sG~lL~~~~w~~~~lI~mgWs~~-----eeLI~v~k~g~v~Vy~~~ge 114 (829)
T KOG2280|consen 64 PYIRIFNISGQLLGRILWKHGELIGMGWSDD-----EELICVQKDGTVHVYGLLGE 114 (829)
T ss_pred eeEEEEeccccchHHHHhcCCCeeeecccCC-----ceEEEEeccceEEEeecchh
Confidence 3588899888766554433347888999763 24778899999999998643
No 453
>PF12341 DUF3639: Protein of unknown function (DUF3639) ; InterPro: IPR022100 This domain family is found in eukaryotes, and is approximately 30 amino acids in length. The family is found in association with PF00400 from PFAM. There are two completely conserved residues (E and R) that may be functionally important.
Probab=44.72 E-value=47 Score=17.34 Aligned_cols=24 Identities=29% Similarity=0.488 Sum_probs=17.1
Q ss_pred eeEEEEeeCCCCcEEEEecCCCcEEEE
Q 036314 228 ALNCIDIGGEGSALIAAGGSDPILRIW 254 (347)
Q Consensus 228 ~~~~~~~~~~~~~~la~~~~d~~i~iw 254 (347)
.+.+++.++ ..++++..-+.+|+|
T Consensus 3 ~i~aia~g~---~~vavaTS~~~lRif 26 (27)
T PF12341_consen 3 EIEAIAAGD---SWVAVATSAGYLRIF 26 (27)
T ss_pred eEEEEEccC---CEEEEEeCCCeEEec
Confidence 456666632 477888888899987
No 454
>KOG2247 consensus WD40 repeat-containing protein [General function prediction only]
Probab=43.87 E-value=3.8 Score=37.86 Aligned_cols=140 Identities=11% Similarity=0.157 Sum_probs=78.0
Q ss_pred EEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeC-CCCe-E
Q 036314 123 HSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP-QQET-I 200 (347)
Q Consensus 123 ~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~-l 200 (347)
....+-+.+.-++.++.+..+..||-...... .. ..+.....++|. +++. +
T Consensus 38 i~~~w~~e~~nlavaca~tiv~~YD~agq~~l--------------------------e~-n~tg~aldm~wDkegdvla 90 (615)
T KOG2247|consen 38 IIHRWRPEGHNLAVACANTIVIYYDKAGQVIL--------------------------EL-NPTGKALDMAWDKEGDVLA 90 (615)
T ss_pred ceeeEecCCCceehhhhhhHHHhhhhhcceec--------------------------cc-CCchhHhhhhhccccchhh
Confidence 34456677666777888888888875421100 00 011111223342 2332 3
Q ss_pred EEEecCCcEEEEECCCCceeeeeeeC-eeeEE-EEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEE
Q 036314 201 YSASWDHSVRTWDVEMGKDLSDIFCG-KALNC-IDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISAC 278 (347)
Q Consensus 201 ~s~s~dg~v~vwd~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v 278 (347)
+.+-..+.+.+||+.+... .++..+ ..... +.+ +++...++.+...+.+.|+.... .+.......|..++..+
T Consensus 91 vlAek~~piylwd~n~eyt-qqLE~gg~~s~sll~w-sKg~~el~ig~~~gn~viynhgt---sR~iiv~Gkh~RRgtq~ 165 (615)
T KOG2247|consen 91 VLAEKTGPIYLWDVNSEYT-QQLESGGTSSKSLLAW-SKGTPELVIGNNAGNIVIYNHGT---SRRIIVMGKHQRRGTQI 165 (615)
T ss_pred hhhhcCCCeeechhhhhhH-HHHhccCcchHHHHhh-ccCCccccccccccceEEEeccc---hhhhhhhcccccceeEE
Confidence 4456677899999976432 222211 11111 233 33444566777889999998653 22233344499999999
Q ss_pred EeCCCCCeEEEEEeCCCc
Q 036314 279 KWHNKSWFHLISASYDGK 296 (347)
Q Consensus 279 ~~s~~~~~~l~s~s~D~~ 296 (347)
++.+.+ +.+.++.|..
T Consensus 166 av~lEd--~vil~dcd~~ 181 (615)
T KOG2247|consen 166 AVTLED--YVILCDCDNT 181 (615)
T ss_pred Eecccc--eeeecCcHHH
Confidence 999987 3566666543
No 455
>PF08801 Nucleoporin_N: Nup133 N terminal like; InterPro: IPR014908 Nucleoporins are the main components of the nuclear pore complex (NPC) in eukaryotic cells, and mediate bidirectional nucleocytoplasmic transport, especially of mRNA and proteins. RNA undergoing nuclear export first encounters the basket of the nuclear pore and many nucleoporins are accessible on the basket side of the pore [, ]. This entry represents the N-terminal of Nucleoprotein which forms a seven-bladed beta propeller structure []. ; PDB: 1XKS_A.
Probab=43.27 E-value=2.7e+02 Score=25.71 Aligned_cols=157 Identities=17% Similarity=0.217 Sum_probs=0.0
Q ss_pred CCeEEEEc--------CCCeEEEEe-eccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeee
Q 036314 44 DNLGRVWK--------AGGVCTHIL-EGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKI 114 (347)
Q Consensus 44 d~~i~iw~--------~~~~~~~~l-~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~ 114 (347)
|..+.+|+ ..+.....+ .++...+.++ ++.....|.|+.|+--...+.........+.-
T Consensus 45 d~~l~vW~Y~~~~~s~~~~~~~~~~~~~~~~~i~~v------------~lv~p~~G~v~f~~~I~~~l~~~t~~~i~l~g 112 (422)
T PF08801_consen 45 DNRLYVWNYSSTQSSPNDGSDFPLFDDGSSSSIPGV------------GLVKPKTGRVVFWESISHLLVLATPSQISLLG 112 (422)
T ss_dssp TTEEEEEE--SS--GG--EEEEE-----------SE------------EEEE-TT-EEEEES-TT-TT--EEEE------
T ss_pred CCEEEEEeccCCCCCcCcccccceecCCCCCCCceE------------EEEEcCCCCEEecccchhhhhcCccccccccc
Q ss_pred -----eeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCC--CCCCCccceeeeccCCCccccccccccccccccCCcc
Q 036314 115 -----LRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTND--SDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQ 187 (347)
Q Consensus 115 -----~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 187 (347)
+..-.-.+......+.+ ++.+..+|.|.....++ +...-........-.........+-+..+........
T Consensus 113 v~~~~l~~~e~~~~~~~~~~~~--~I~~ts~GRif~~~~~~~~g~~~l~y~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~ 190 (422)
T PF08801_consen 113 VSYSELLSGELSTSLTNVEPSG--FIVSTSTGRIFFLGIRDSNGKYELSYQQLSGRCSKINHTSSSIFSSLLPSFSDPRP 190 (422)
T ss_dssp ------------EEEEEEETTT--EEEEETT--EEEEEE-TTS-EEEEE-TT----------------------------
T ss_pred cceeeecCCceEEECCCCceEE--EEEECCCCeEEEEeCCCCCCcEEEEEEcCcCCccccccccCceeccccCCcccchh
Q ss_pred ceEEEEe-CCCCeEEEEecCCcEEEEEC
Q 036314 188 CVSSVVW-PQQETIYSASWDHSVRTWDV 214 (347)
Q Consensus 188 ~v~~~~~-~~~~~l~s~s~dg~v~vwd~ 214 (347)
.|.++.. +..+.+++.+.++.|++||+
T Consensus 191 ~I~~v~~d~~r~~ly~l~~~~~Iq~w~l 218 (422)
T PF08801_consen 191 KIVQVAVDPSRRLLYTLTSDGSIQVWDL 218 (422)
T ss_dssp -EEEEEEETTTTEEEEEESSE-EEEEEE
T ss_pred ceeeEEecCCcCEEEEEeCCCcEEEEEE
No 456
>KOG3522 consensus Predicted guanine nucleotide exchange factor [Signal transduction mechanisms]
Probab=43.22 E-value=1.6e+02 Score=29.77 Aligned_cols=133 Identities=13% Similarity=0.083 Sum_probs=70.4
Q ss_pred CCCeEEEEecCCcEEEEECCCCce-eeee--ee--CeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCC--CCCeEEe
Q 036314 196 QQETIYSASWDHSVRTWDVEMGKD-LSDI--FC--GKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGT--SAPVFQF 268 (347)
Q Consensus 196 ~~~~l~s~s~dg~v~vwd~~~~~~-~~~~--~~--~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~--~~~~~~~ 268 (347)
+...+..++.++.+.++--..+.. .... .. ...+.++.+.+ ..+-+|.-||++-.|-...... ..+...+
T Consensus 546 ~~PTic~gtq~ssisissss~~s~ke~~~~~~spe~~~v~~l~~ss---~Slgagl~dgt~a~y~rap~gSwd~ep~~~~ 622 (925)
T KOG3522|consen 546 PHPTICLGTQTSSISISSSSLDSIKEVTSEPPSPEHESVKLLLFSS---GSLGAGLIDGTLAVYGRAPSGSWDGEPNISI 622 (925)
T ss_pred CCCcccccCccceeEEeeccCCcccceeccCCCCchhhhhhhhccc---cccccCccCCccccccCCCCCCCCCCCcccc
Confidence 334567777888888776542211 1111 11 12334444322 1344566667766654221110 0111222
Q ss_pred cCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeec---CCCCeEEEEeecCCC-EEEEccCC
Q 036314 269 SSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVID---SHKDKVLCADWWRGD-SVISGGVD 335 (347)
Q Consensus 269 ~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~---~h~~~v~~~~~~~~~-~l~s~s~D 335 (347)
.-....|.+.++..| .+-|+.||.|.++...+......++ .|...|+++.+.+.. .++-++.|
T Consensus 623 ~~g~lPvrsla~~ed----~~was~gG~V~vi~~tt~~~~~~leahqee~~~Vthm~~~~~gVwvafasG~ 689 (925)
T KOG3522|consen 623 PTGSLPVRSLAFQED----FVWASEGGCVHVIPSTTFIRSWDLEAHQEEAHSVTHMLYLDNGVWVAFASGD 689 (925)
T ss_pred ccCCccccchhhhhc----eeeeecCCceEEEechhccccchhHHHHhhcceEEEEEeeCCceEEEEcCCC
Confidence 223446777777654 4567889999999998765444443 345678888887544 34443333
No 457
>PF10395 Utp8: Utp8 family; InterPro: IPR018843 Utp8 is an essential component of the nuclear tRNA export machinery in Saccharomyces cerevisiae (Baker's yeast). It is a tRNA binding protein that acts at a step between tRNA maturation /aminoacylation, and translocation of the tRNA across the nuclear pore complex [].
Probab=40.13 E-value=3.9e+02 Score=26.57 Aligned_cols=63 Identities=5% Similarity=0.055 Sum_probs=36.5
Q ss_pred EEeCCCCeEEEEecCCcEEEEECCCCceeeeeeeCee-----eEEEEeeCCCCcEEEEecCCCcEEEEeCC
Q 036314 192 VVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKA-----LNCIDIGGEGSALIAAGGSDPILRIWDPR 257 (347)
Q Consensus 192 ~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~la~~~~d~~i~iwd~~ 257 (347)
+++..|.. +-- .+++|.+|.+...+...++..... -..+.+.++..+.+.-+ .+++|++.|+.
T Consensus 238 f~Y~~G~L-Y~l-~~~~i~~ysip~f~~~~tI~l~~ii~~~~~~~vSl~~~s~nRvLLs-~~nkIyLld~~ 305 (670)
T PF10395_consen 238 FCYQFGKL-YQL-SKKTISSYSIPNFQIQKTISLPSIIDKESDDLVSLKPPSPNRVLLS-VNNKIYLLDLK 305 (670)
T ss_pred EEEeCCEE-EEE-eCCEEEEEEcCCceEEEEEEechhhccccccceEeecCCCCeEEEE-cCCEEEEEeeh
Confidence 34445543 222 678999999987766555543311 12334444444444433 47899999975
No 458
>TIGR02608 delta_60_rpt delta-60 repeat domain. This domain occurs in tandem repeats, as many as 13, in proteins from Bdellovibrio bacteriovorus, Azotobacter vinelandii, Geobacter sulfurreducens, Pirellula sp. 1, Myxococcus xanthus, and others, many of which are Deltaproteobacteria. The periodicity of the repeat ranges from about 57 to 61 amino acids, and a core region of about 54 is represented by this model and seed alignment.
Probab=38.05 E-value=94 Score=19.44 Aligned_cols=19 Identities=16% Similarity=0.405 Sum_probs=15.3
Q ss_pred ceEEEEEeCCCCEEEEeeC
Q 036314 121 SVHSIAAETSGNMVCSGSW 139 (347)
Q Consensus 121 ~V~~v~~s~~~~~l~sgs~ 139 (347)
.+.++++.|||+.++.|..
T Consensus 2 ~~~~~~~q~DGkIlv~G~~ 20 (55)
T TIGR02608 2 RAYAVAVQSDGKILVAGYV 20 (55)
T ss_pred ceEEEEECCCCcEEEEEEe
Confidence 3567889999999998853
No 459
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=36.12 E-value=3.2e+02 Score=24.54 Aligned_cols=52 Identities=19% Similarity=0.362 Sum_probs=39.5
Q ss_pred cEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEE-EEecCCCcEEEEeCCCC
Q 036314 208 SVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALI-AAGGSDPILRIWDPRKP 259 (347)
Q Consensus 208 ~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-a~~~~d~~i~iwd~~~~ 259 (347)
.|-++|+.+.+.+..+....++..+.++.++..+| +....++.+.+||....
T Consensus 270 eVWv~D~~t~krv~Ri~l~~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tG 322 (342)
T PF06433_consen 270 EVWVYDLKTHKRVARIPLEHPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATG 322 (342)
T ss_dssp EEEEEETTTTEEEEEEEEEEEESEEEEESSSS-EEEEEETTTTEEEEEETTT-
T ss_pred EEEEEECCCCeEEEEEeCCCccceEEEccCCCcEEEEEcCCCCeEEEEeCcCC
Confidence 37778999999999888777777888876665555 44566899999998753
No 460
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=35.07 E-value=3.2e+02 Score=24.20 Aligned_cols=212 Identities=12% Similarity=0.111 Sum_probs=105.4
Q ss_pred eEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCcc--ceeeeccCCCccccccccccccccccCCccceEEEEeCC---
Q 036314 122 VHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQ--VSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQ--- 196 (347)
Q Consensus 122 V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~--- 196 (347)
-..++|+|.+.+.++...-++..+||.......+.. ....-............++. .+.+.. ++....
T Consensus 25 ~WGia~~p~~~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGi---VfN~~~----~F~vt~~g~ 97 (336)
T TIGR03118 25 AWGLSYRPGGPFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQ---VFNGSD----TFVVSGEGI 97 (336)
T ss_pred cceeEecCCCCEEEecCCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEE---EEeCCC----ceEEcCCCc
Confidence 367999999999998888899999998622111110 00000000000000000110 000000 111111
Q ss_pred --CCeEEEEecCCcEEEEECCCCce-----eeeeee---CeeeEEEEeeCC--CCcEEEEecCCCcEEEEeCCCCCCCC-
Q 036314 197 --QETIYSASWDHSVRTWDVEMGKD-----LSDIFC---GKALNCIDIGGE--GSALIAAGGSDPILRIWDPRKPGTSA- 263 (347)
Q Consensus 197 --~~~l~s~s~dg~v~vwd~~~~~~-----~~~~~~---~~~~~~~~~~~~--~~~~la~~~~d~~i~iwd~~~~~~~~- 263 (347)
...++.+++||+|.-|...-+.. ...+.. .....-+++... +..+.|+--..++|.+||-.-.....
T Consensus 98 ~~~a~Fif~tEdGTisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~~f~~~~~~ 177 (336)
T TIGR03118 98 TGPSRFLFVTEDGTLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKGSFRPPPLP 177 (336)
T ss_pred ccceeEEEEeCCceEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecCCCceEEEeccCCCceEEecCccccccCC
Confidence 12367889999999998532221 111111 122344555422 34566777788999999854210000
Q ss_pred --------C-------eEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeec--CCCCeEEEEeecC-
Q 036314 264 --------P-------VFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVID--SHKDKVLCADWWR- 325 (347)
Q Consensus 264 --------~-------~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~--~h~~~v~~~~~~~- 325 (347)
+ ++.+ +..=+|.-..-.++... =+.|..-|.|.++|.+ |..++++. +.-+.-|.++..|
T Consensus 178 g~F~DP~iPagyAPFnIqni-g~~lyVtYA~qd~~~~d-~v~G~G~G~VdvFd~~-G~l~~r~as~g~LNaPWG~a~APa 254 (336)
T TIGR03118 178 GSFIDPALPAGYAPFNVQNL-GGTLYVTYAQQDADRND-EVAGAGLGYVNVFTLN-GQLLRRVASSGRLNAPWGLAIAPE 254 (336)
T ss_pred CCccCCCCCCCCCCcceEEE-CCeEEEEEEecCCcccc-cccCCCcceEEEEcCC-CcEEEEeccCCcccCCceeeeChh
Confidence 0 0111 00112222222333321 2334455789999997 55666652 3445667887754
Q ss_pred ------CCEEEEccCCceEEEeec
Q 036314 326 ------GDSVISGGVDSKLCVSSG 343 (347)
Q Consensus 326 ------~~~l~s~s~D~~v~vw~~ 343 (347)
|..|+.==.||+|..++-
T Consensus 255 ~FG~~sg~lLVGNFGDG~InaFD~ 278 (336)
T TIGR03118 255 SFGSLSGALLVGNFGDGTINAYDP 278 (336)
T ss_pred hhCCCCCCeEEeecCCceeEEecC
Confidence 444544335999999884
No 461
>PF09826 Beta_propel: Beta propeller domain; InterPro: IPR019198 This entry consists of predicted secreted proteins containing a C-terminal beta-propeller domain distantly related to WD-40 repeats.
Probab=34.74 E-value=2.2e+02 Score=27.35 Aligned_cols=20 Identities=25% Similarity=0.218 Sum_probs=16.0
Q ss_pred CCCCeEEEEecCCcEEEEECC
Q 036314 195 PQQETIYSASWDHSVRTWDVE 215 (347)
Q Consensus 195 ~~~~~l~s~s~dg~v~vwd~~ 215 (347)
.+|++|+..+ ++.|.|+|..
T Consensus 20 TDG~yIY~v~-~~~l~Iida~ 39 (521)
T PF09826_consen 20 TDGEYIYVVS-GGRLYIIDAY 39 (521)
T ss_pred ECCCEEEEEe-CCEEEEEECC
Confidence 4788888777 7889999984
No 462
>PF14727 PHTB1_N: PTHB1 N-terminus
Probab=34.43 E-value=3.9e+02 Score=24.91 Aligned_cols=114 Identities=15% Similarity=0.273 Sum_probs=54.6
Q ss_pred CEEEEEecCCeEEEEcCCCe---EEE-Eee-ccCCceEEEEEeec-CCCceEEEEEccCCCcEEEEeccccccccCcccc
Q 036314 36 GFILTGCYDNLGRVWKAGGV---CTH-ILE-GHCGAVSSVNIIKS-DGLKYVTVATASKDQTLRLWKFDAEELVNHPKKI 109 (347)
Q Consensus 36 ~~l~sg~~d~~i~iw~~~~~---~~~-~l~-~h~~~V~~v~~~~~-~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~ 109 (347)
..|+.||..|.+||+++.+. ... .|. .-..+|..|..-+- .+.+...||. =.-..+.+|.+............
T Consensus 38 d~IivGS~~G~LrIy~P~~~~~~~~~lllE~~l~~PILqv~~G~F~s~~~~~~LaV-LhP~kl~vY~v~~~~g~~~~g~~ 116 (418)
T PF14727_consen 38 DKIIVGSYSGILRIYDPSGNEFQPEDLLLETQLKDPILQVECGKFVSGSEDLQLAV-LHPRKLSVYSVSLVDGTVEHGNQ 116 (418)
T ss_pred cEEEEeccccEEEEEccCCCCCCCccEEEEEecCCcEEEEEeccccCCCCcceEEE-ecCCEEEEEEEEecCCCcccCcE
Confidence 58999999999999987421 111 122 12356766654320 0001112222 33345666666321110000001
Q ss_pred ceeeeeecccc--ceEEEEEeC----C-CCEEEEeeCCCcEEEEecCC
Q 036314 110 RSFKILRGHKA--SVHSIAAET----S-GNMVCSGSWDCTISLWRTND 150 (347)
Q Consensus 110 ~~~~~~~~h~~--~V~~v~~s~----~-~~~l~sgs~Dg~I~iwd~~~ 150 (347)
-.+..+..|.- ....+..-| . -.++..-|.||++.+|+-+.
T Consensus 117 ~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~ 164 (418)
T PF14727_consen 117 YQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQES 164 (418)
T ss_pred EEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCc
Confidence 11122223321 122233222 2 25777889999999998653
No 463
>KOG1900 consensus Nuclear pore complex, Nup155 component (D Nup154, sc Nup157/Nup170) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=34.15 E-value=6.3e+02 Score=27.26 Aligned_cols=32 Identities=13% Similarity=0.195 Sum_probs=22.4
Q ss_pred eeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCC
Q 036314 228 ALNCIDIGGEGSALIAAGGSDPILRIWDPRKPG 260 (347)
Q Consensus 228 ~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~ 260 (347)
++..+.++ +...++.+=++.++|+.||+...+
T Consensus 244 pI~qi~ID-~SR~IlY~lsek~~v~~Y~i~~~G 275 (1311)
T KOG1900|consen 244 PIRQITID-NSRNILYVLSEKGTVSAYDIGGNG 275 (1311)
T ss_pred cceeeEec-cccceeeeeccCceEEEEEccCCC
Confidence 56666663 344566677888999999987633
No 464
>KOG1896 consensus mRNA cleavage and polyadenylation factor II complex, subunit CFT1 (CPSF subunit) [RNA processing and modification]
Probab=33.90 E-value=6.2e+02 Score=27.13 Aligned_cols=113 Identities=12% Similarity=0.057 Sum_probs=56.0
Q ss_pred cceEEEEeCCCCeEEEEecCCcEEEEEC-CCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCe
Q 036314 187 QCVSSVVWPQQETIYSASWDHSVRTWDV-EMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPV 265 (347)
Q Consensus 187 ~~v~~~~~~~~~~l~s~s~dg~v~vwd~-~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~ 265 (347)
+.|..++--+ ..|++ +....|.||++ +....+..-+..-++...++..- .++|..|.-=..|.+.--.. .+..+
T Consensus 1098 GtVsavceV~-G~l~~-~~GqKI~v~~l~r~~~ligVaFiD~~~yv~s~~~v-knlIl~gDV~ksisfl~fqe--ep~rl 1172 (1366)
T KOG1896|consen 1098 GTVSAVCEVR-GHLLS-SQGQKIIVRKLDRDSELIGVAFIDLPLYVHSMKVV-KNLILAGDVMKSISFLGFQE--EPYRL 1172 (1366)
T ss_pred cceEEEEEec-cEEEE-ccCcEEEEEEeccCCcceeeEEeccceeEEehhhh-hhheehhhhhhceEEEEEcc--CceEE
Confidence 4455444223 34544 34567999999 44443332222222222222222 23455554445565554332 22223
Q ss_pred EEecCCCC--CeeEEEeCCCCCe-EEEEEeCCCcEEEEEcCC
Q 036314 266 FQFSSHNS--WISACKWHNKSWF-HLISASYDGKVMLWDLRT 304 (347)
Q Consensus 266 ~~~~~h~~--~v~~v~~s~~~~~-~l~s~s~D~~i~lwd~~~ 304 (347)
.-++.... .+.++.|--+|.. .++.+..|+.|+++-...
T Consensus 1173 sL~srd~~~l~v~s~EFLVdg~~L~flvsDa~rNi~vy~Y~P 1214 (1366)
T KOG1896|consen 1173 SLLSRDFEPLNVYSTEFLVDGSNLSFLVSDADRNIHVYMYAP 1214 (1366)
T ss_pred EEeecCCchhhceeeeeEEcCCeeEEEEEcCCCcEEEEEeCC
Confidence 23322222 2556666555543 478888999999986653
No 465
>PLN00033 photosystem II stability/assembly factor; Provisional
Probab=33.64 E-value=3.9e+02 Score=24.69 Aligned_cols=102 Identities=6% Similarity=0.009 Sum_probs=49.8
Q ss_pred CCCEEEEEecCCeEEEEcCCCe-EEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCcccccee
Q 036314 34 NPGFILTGCYDNLGRVWKAGGV-CTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSF 112 (347)
Q Consensus 34 ~~~~l~sg~~d~~i~iw~~~~~-~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~ 112 (347)
++.+++.|......+-|+.... ....-......+.++.+.+++. ++..+.+|.+. |....++. .....+
T Consensus 249 dG~~~~vg~~G~~~~s~d~G~~~W~~~~~~~~~~l~~v~~~~dg~-----l~l~g~~G~l~-~S~d~G~~----~~~~~f 318 (398)
T PLN00033 249 DGDYVAVSSRGNFYLTWEPGQPYWQPHNRASARRIQNMGWRADGG-----LWLLTRGGGLY-VSKGTGLT----EEDFDF 318 (398)
T ss_pred CCCEEEEECCccEEEecCCCCcceEEecCCCccceeeeeEcCCCC-----EEEEeCCceEE-EecCCCCc----ccccce
Confidence 4445555544444455655433 2333333345678888876433 33445666643 33333210 000011
Q ss_pred eeeec--cccceEEEEEeCCCCEEEEeeCCCcEEEE
Q 036314 113 KILRG--HKASVHSIAAETSGNMVCSGSWDCTISLW 146 (347)
Q Consensus 113 ~~~~~--h~~~V~~v~~s~~~~~l~sgs~Dg~I~iw 146 (347)
..+.- -...+.++.|.+++..++ ++..|.+...
T Consensus 319 ~~~~~~~~~~~l~~v~~~~d~~~~a-~G~~G~v~~s 353 (398)
T PLN00033 319 EEADIKSRGFGILDVGYRSKKEAWA-AGGSGILLRS 353 (398)
T ss_pred eecccCCCCcceEEEEEcCCCcEEE-EECCCcEEEe
Confidence 11111 123488898988777655 5667777664
No 466
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=31.37 E-value=4e+02 Score=24.11 Aligned_cols=16 Identities=6% Similarity=0.173 Sum_probs=12.7
Q ss_pred eEEEEEeCCCCEEEEe
Q 036314 122 VHSIAAETSGNMVCSG 137 (347)
Q Consensus 122 V~~v~~s~~~~~l~sg 137 (347)
...++|.++|+++++-
T Consensus 16 P~~ia~d~~G~l~V~e 31 (367)
T TIGR02604 16 PIAVCFDERGRLWVAE 31 (367)
T ss_pred CceeeECCCCCEEEEe
Confidence 4678999999987764
No 467
>PF14339 DUF4394: Domain of unknown function (DUF4394)
Probab=30.02 E-value=3.4e+02 Score=22.94 Aligned_cols=84 Identities=11% Similarity=0.158 Sum_probs=49.2
Q ss_pred EeCCCCCCCCCeEEecC--CCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCcccee----ec-CCCCeEEEEeecC-
Q 036314 254 WDPRKPGTSAPVFQFSS--HNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSV----ID-SHKDKVLCADWWR- 325 (347)
Q Consensus 254 wd~~~~~~~~~~~~~~~--h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~----~~-~h~~~v~~~~~~~- 325 (347)
|+...+........+.+ ....+..++|-|.... |..-+.++.|.-.|..++..... +. .-.+.-..++|.|
T Consensus 6 f~~~~p~~~~~~~~vtGL~~ge~l~GID~Rpa~G~-LYgl~~~g~lYtIn~~tG~aT~vg~s~~~~al~g~~~gvDFNP~ 84 (236)
T PF14339_consen 6 FNSDNPAKVTSSVAVTGLAAGESLVGIDFRPANGQ-LYGLGSTGRLYTINPATGAATPVGASPLTVALSGTAFGVDFNPA 84 (236)
T ss_pred EeCCCCcceeccEEeecccCCCeEEEEEeecCCCC-EEEEeCCCcEEEEECCCCeEEEeecccccccccCceEEEecCcc
Confidence 55444433222334444 4456888999998865 66667788999999988864332 11 1123357789976
Q ss_pred -CC-EEEEccCCceEE
Q 036314 326 -GD-SVISGGVDSKLC 339 (347)
Q Consensus 326 -~~-~l~s~s~D~~v~ 339 (347)
++ ++++ +....+|
T Consensus 85 aDRlRvvs-~~GqNlR 99 (236)
T PF14339_consen 85 ADRLRVVS-NTGQNLR 99 (236)
T ss_pred cCcEEEEc-cCCcEEE
Confidence 44 3553 3333343
No 468
>KOG4460 consensus Nuclear pore complex, Nup88/rNup84 component [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=29.95 E-value=5.1e+02 Score=24.94 Aligned_cols=32 Identities=22% Similarity=0.392 Sum_probs=25.9
Q ss_pred CeeEEEeCCCC--CeEEEEEeCCCcEEEEEcCCC
Q 036314 274 WISACKWHNKS--WFHLISASYDGKVMLWDLRTA 305 (347)
Q Consensus 274 ~v~~v~~s~~~--~~~l~s~s~D~~i~lwd~~~~ 305 (347)
.+..++|+|+. ..+|..-+.|.+||+||+...
T Consensus 167 tl~Qa~WHP~S~~D~hL~iL~sdnviRiy~lS~~ 200 (741)
T KOG4460|consen 167 TLKQAAWHPSSILDPHLVLLTSDNVIRIYSLSEP 200 (741)
T ss_pred eeeeccccCCccCCceEEEEecCcEEEEEecCCc
Confidence 35668899987 556888899999999999764
No 469
>KOG3611 consensus Semaphorins [Signal transduction mechanisms]
Probab=29.92 E-value=6e+02 Score=25.75 Aligned_cols=79 Identities=8% Similarity=0.106 Sum_probs=49.2
Q ss_pred CCceEEEEEeec--CCCceEEEEEccCCCcEE-EEeccccccccCcc-ccceeeeeeccccceEEEEEeCCCCEEEEeeC
Q 036314 64 CGAVSSVNIIKS--DGLKYVTVATASKDQTLR-LWKFDAEELVNHPK-KIRSFKILRGHKASVHSIAAETSGNMVCSGSW 139 (347)
Q Consensus 64 ~~~V~~v~~~~~--~~~~~~~l~s~s~Dg~v~-~wd~~~~~~~~~~~-~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~ 139 (347)
....+.|++... .+.....|..|+++|+|. +-.+..+. ...+ -.+.++.++. ..+|..+.+++....|+.|+.
T Consensus 407 ~~~~t~I~Vd~~~~~~~~ydVlflGTd~G~vlKvV~~~~~~--~~~~~llEElqvf~~-~~pI~~m~Ls~~~~~LyVgs~ 483 (737)
T KOG3611|consen 407 DYRLTQIVVDRVAGLDGNYDVLFLGTDAGTVLKVVSPGKES--GKSNVLLEELQVFPD-AEPIRSMQLSSKRGSLYVGSR 483 (737)
T ss_pred cceEEEEEEEEecCCCCcEEEEEEecCCCeEEEEEecCCcc--CccceeEEEEeecCC-CCceeEEEecccCCeEEEEcc
Confidence 444566666532 123456788899999853 33332210 0000 1334455543 478999999999888999999
Q ss_pred CCcEEE
Q 036314 140 DCTISL 145 (347)
Q Consensus 140 Dg~I~i 145 (347)
+|.++|
T Consensus 484 ~gV~qv 489 (737)
T KOG3611|consen 484 SGVVQV 489 (737)
T ss_pred CcEEEe
Confidence 998887
No 470
>smart00036 CNH Domain found in NIK1-like kinases, mouse citron and yeast ROM1, ROM2. Unpublished observations.
Probab=29.37 E-value=3.9e+02 Score=23.43 Aligned_cols=106 Identities=11% Similarity=0.053 Sum_probs=57.9
Q ss_pred CeEEEEecCCcEEEEECCCC-ceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCC-----------C-CC
Q 036314 198 ETIYSASWDHSVRTWDVEMG-KDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGT-----------S-AP 264 (347)
Q Consensus 198 ~~l~s~s~dg~v~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~-----------~-~~ 264 (347)
..|+.|..+|...+. +... .....+.....+.++.+.+....+++.++....++.+|+..-.. . ..
T Consensus 14 ~~lL~GTe~Gly~~~-~~~~~~~~~kl~~~~~v~q~~v~~~~~lLi~Lsgk~~~L~~~~L~~L~~~~~~~~~~~~~~~~~ 92 (302)
T smart00036 14 KWLLVGTEEGLYVLN-ISDQPGTLEKLIGRRSVTQIWVLEENNVLLMISGKKPQLYSHPLSALVEKKEALGSARLVIRKN 92 (302)
T ss_pred cEEEEEeCCceEEEE-cccCCCCeEEecCcCceEEEEEEhhhCEEEEEeCCcceEEEEEHHHhhhhhhccCCcccccccc
Confidence 478888888855544 5432 23444555567888888766655666666566699999742110 0 00
Q ss_pred eEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCC
Q 036314 265 VFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRT 304 (347)
Q Consensus 265 ~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~ 304 (347)
....-+|......+..........+.++.-.+|.++.+..
T Consensus 93 ~~~~~~~tkGc~~~~v~~~~~~~~l~~A~~~~i~l~~~~~ 132 (302)
T smart00036 93 VLTKIPDTKGCHLCAVVNGKRSLFLCVALQSSVVLLQWYN 132 (302)
T ss_pred ceEeCCcCCceEEEEEEcCCCcEEEEEEcCCeEEEEEccC
Confidence 0112244443333333322222345556667888876643
No 471
>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3.1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.
Probab=28.40 E-value=4.7e+02 Score=24.01 Aligned_cols=198 Identities=16% Similarity=0.228 Sum_probs=100.7
Q ss_pred CEEEEEecCCeEEEEcCCCeEEEEeeccCCceEEEEEee---cCCCceEEEEEccC--C--CcEEEEecccc--ccccCc
Q 036314 36 GFILTGCYDNLGRVWKAGGVCTHILEGHCGAVSSVNIIK---SDGLKYVTVATASK--D--QTLRLWKFDAE--ELVNHP 106 (347)
Q Consensus 36 ~~l~sg~~d~~i~iw~~~~~~~~~l~~h~~~V~~v~~~~---~~~~~~~~l~s~s~--D--g~v~~wd~~~~--~~~~~~ 106 (347)
.+|+....++=+.+||+.|+.++.+. .+.++.+.+.. -++.. .-|+.+++ + .+|++|.++.. .+....
T Consensus 69 SlIigTdK~~GL~VYdL~Gk~lq~~~--~Gr~NNVDvrygf~l~g~~-vDlavas~R~~g~n~l~~f~id~~~g~L~~v~ 145 (381)
T PF02333_consen 69 SLIIGTDKKGGLYVYDLDGKELQSLP--VGRPNNVDVRYGFPLNGKT-VDLAVASDRSDGRNSLRLFRIDPDTGELTDVT 145 (381)
T ss_dssp -EEEEEETTTEEEEEETTS-EEEEE---SS-EEEEEEEEEEEETTEE-EEEEEEEE-CCCT-EEEEEEEETTTTEEEE-C
T ss_pred ceEEEEeCCCCEEEEcCCCcEEEeec--CCCcceeeeecceecCCce-EEEEEEecCcCCCCeEEEEEecCCCCcceEcC
Confidence 36777777788999999998887774 35566666532 12211 12344443 2 57999988632 221100
Q ss_pred cccceeeeeeccccceEEEEE--eC-CCC-EEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccc
Q 036314 107 KKIRSFKILRGHKASVHSIAA--ET-SGN-MVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTL 182 (347)
Q Consensus 107 ~~~~~~~~~~~h~~~V~~v~~--s~-~~~-~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (347)
....+ +..-...+..+++ ++ +|. +++....+|.+..|.+...... ....+.++.+
T Consensus 146 ~~~~p---~~~~~~e~yGlcly~~~~~g~~ya~v~~k~G~~~Qy~L~~~~~g------------------~v~~~lVR~f 204 (381)
T PF02333_consen 146 DPAAP---IATDLSEPYGLCLYRSPSTGALYAFVNGKDGRVEQYELTDDGDG------------------KVSATLVREF 204 (381)
T ss_dssp BTTC----EE-SSSSEEEEEEEE-TTT--EEEEEEETTSEEEEEEEEE-TTS------------------SEEEEEEEEE
T ss_pred CCCcc---cccccccceeeEEeecCCCCcEEEEEecCCceEEEEEEEeCCCC------------------cEeeEEEEEe
Confidence 00001 1111223556654 33 454 6667889999999987532110 0112234444
Q ss_pred cCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCc--eeeee--eeC----eeeEEEEee--CC-CCcEEEEecCCCc
Q 036314 183 VGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGK--DLSDI--FCG----KALNCIDIG--GE-GSALIAAGGSDPI 250 (347)
Q Consensus 183 ~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~--~~~~~--~~~----~~~~~~~~~--~~-~~~~la~~~~d~~ 250 (347)
.... .+..+.. ....+|+.+-.+.-|.-|+.+... ....+ ..+ ..+..+++- .+ .+.+|++.-.+++
T Consensus 205 ~~~s-Q~EGCVVDDe~g~LYvgEE~~GIW~y~Aep~~~~~~~~v~~~~g~~l~aDvEGlaly~~~~g~gYLivSsQG~~s 283 (381)
T PF02333_consen 205 KVGS-QPEGCVVDDETGRLYVGEEDVGIWRYDAEPEGGNDRTLVASADGDGLVADVEGLALYYGSDGKGYLIVSSQGDNS 283 (381)
T ss_dssp E-SS--EEEEEEETTTTEEEEEETTTEEEEEESSCCC-S--EEEEEBSSSSB-S-EEEEEEEE-CCC-EEEEEEEGGGTE
T ss_pred cCCC-cceEEEEecccCCEEEecCccEEEEEecCCCCCCcceeeecccccccccCccceEEEecCCCCeEEEEEcCCCCe
Confidence 3322 3444444 345678888888888888875321 11111 111 234555553 22 3456676666889
Q ss_pred EEEEeCCC
Q 036314 251 LRIWDPRK 258 (347)
Q Consensus 251 i~iwd~~~ 258 (347)
..+||.+.
T Consensus 284 f~Vy~r~~ 291 (381)
T PF02333_consen 284 FAVYDREG 291 (381)
T ss_dssp EEEEESST
T ss_pred EEEEecCC
Confidence 99999764
No 472
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=27.56 E-value=5.1e+02 Score=24.13 Aligned_cols=46 Identities=9% Similarity=0.001 Sum_probs=32.7
Q ss_pred ecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCC
Q 036314 268 FSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSH 314 (347)
Q Consensus 268 ~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h 314 (347)
+......+.++..+|.+. +.|+...=|+|.|+|+.++..+..++|=
T Consensus 303 l~D~~R~~~~i~~sP~~~-laA~tDslGRV~LiD~~~~~vvrmWKGY 348 (415)
T PF14655_consen 303 LPDSKREGESICLSPSGR-LAAVTDSLGRVLLIDVARGIVVRMWKGY 348 (415)
T ss_pred eccCCceEEEEEECCCCC-EEEEEcCCCcEEEEECCCChhhhhhccC
Confidence 334444578899999974 4555545589999999998777766553
No 473
>KOG4460 consensus Nuclear pore complex, Nup88/rNup84 component [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=26.20 E-value=6e+02 Score=24.51 Aligned_cols=26 Identities=12% Similarity=0.046 Sum_probs=20.6
Q ss_pred ceEEEEEeCCCCEEEEeeCCCcEEEE
Q 036314 121 SVHSIAAETSGNMVCSGSWDCTISLW 146 (347)
Q Consensus 121 ~V~~v~~s~~~~~l~sgs~Dg~I~iw 146 (347)
.|..+..++.|..++-.|-+|.+..+
T Consensus 105 eV~~vl~s~~GS~VaL~G~~Gi~vMe 130 (741)
T KOG4460|consen 105 EVYQVLLSPTGSHVALIGIKGLMVME 130 (741)
T ss_pred EEEEEEecCCCceEEEecCCeeEEEE
Confidence 36677789999988888888887665
No 474
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=25.73 E-value=4.8e+02 Score=23.23 Aligned_cols=75 Identities=13% Similarity=0.140 Sum_probs=42.2
Q ss_pred CceEEEEEeecCC---CceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCC
Q 036314 65 GAVSSVNIIKSDG---LKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDC 141 (347)
Q Consensus 65 ~~V~~v~~~~~~~---~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg 141 (347)
..+..+.|.+... ..+.++++.-..+.|....++.+..+ ......+......+..+++.|||.+.++-..+|
T Consensus 253 ~ap~G~~~y~g~~fp~~~g~~~~~~~~~~~i~~~~~~~~~~~-----~~~~~~~~~~~~r~~~v~~~pDG~Lyv~~d~~G 327 (331)
T PF07995_consen 253 SAPTGIIFYRGSAFPEYRGDLFVADYGGGRIWRLDLDEDGSV-----TEEEEFLGGFGGRPRDVAQGPDGALYVSDDSDG 327 (331)
T ss_dssp --EEEEEEE-SSSSGGGTTEEEEEETTTTEEEEEEEETTEEE-----EEEEEECTTSSS-EEEEEEETTSEEEEEE-TTT
T ss_pred cccCceEEECCccCccccCcEEEecCCCCEEEEEeeecCCCc-----cceEEccccCCCCceEEEEcCCCeEEEEECCCC
Confidence 4466777654221 23445666665667777776533211 011112334455799999999999998888888
Q ss_pred cEE
Q 036314 142 TIS 144 (347)
Q Consensus 142 ~I~ 144 (347)
.|.
T Consensus 328 ~iy 330 (331)
T PF07995_consen 328 KIY 330 (331)
T ss_dssp TEE
T ss_pred eEe
Confidence 873
No 475
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=25.00 E-value=7.5e+02 Score=25.24 Aligned_cols=24 Identities=25% Similarity=0.375 Sum_probs=18.8
Q ss_pred CCeEEEEecCCcEEEEECCCCcee
Q 036314 197 QETIYSASWDHSVRTWDVEMGKDL 220 (347)
Q Consensus 197 ~~~l~s~s~dg~v~vwd~~~~~~~ 220 (347)
++.++.++.++.|.-.|.++|+.+
T Consensus 194 gg~lYv~t~~~~V~ALDa~TGk~l 217 (764)
T TIGR03074 194 GDTLYLCTPHNKVIALDAATGKEK 217 (764)
T ss_pred CCEEEEECCCCeEEEEECCCCcEE
Confidence 567777788888888888888765
No 476
>PF14779 BBS1: Ciliary BBSome complex subunit 1
Probab=24.11 E-value=3.2e+02 Score=23.44 Aligned_cols=56 Identities=11% Similarity=0.008 Sum_probs=34.0
Q ss_pred eEEEEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeC--C-CCcEEEEecCCCcEEEE
Q 036314 199 TIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGG--E-GSALIAAGGSDPILRIW 254 (347)
Q Consensus 199 ~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~la~~~~d~~i~iw 254 (347)
-|+.|..+|.|.|.|.+....+.++........+...+ + -...|+.++.||.|++.
T Consensus 197 cLViGTE~~~i~iLd~~af~il~~~~lpsvPv~i~~~G~~devdyRI~Va~Rdg~iy~i 255 (257)
T PF14779_consen 197 CLVIGTESGEIYILDPQAFTILKQVQLPSVPVFISVSGQYDEVDYRIVVACRDGKIYTI 255 (257)
T ss_pred eEEEEecCCeEEEECchhheeEEEEecCCCceEEEEEeeeeccceEEEEEeCCCEEEEE
Confidence 48889999999999987766655555433222222111 1 22355666778877654
No 477
>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein. Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat.
Probab=22.99 E-value=5.2e+02 Score=22.69 Aligned_cols=51 Identities=12% Similarity=0.087 Sum_probs=25.1
Q ss_pred CcEEEEECCCCceeee--eeeCeeeEEEEeeCCCCcEEEEecCCC----cEEEEeCCC
Q 036314 207 HSVRTWDVEMGKDLSD--IFCGKALNCIDIGGEGSALIAAGGSDP----ILRIWDPRK 258 (347)
Q Consensus 207 g~v~vwd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~la~~~~d~----~i~iwd~~~ 258 (347)
..+..||+++.+.... +........... ..++.+.+.|+.++ .+..||+..
T Consensus 139 ~~v~~yd~~~~~W~~~~~~p~~~r~~~~~~-~~~~~iYv~GG~~~~~~~~~~~yd~~~ 195 (323)
T TIGR03548 139 NKSYLFNLETQEWFELPDFPGEPRVQPVCV-KLQNELYVFGGGSNIAYTDGYKYSPKK 195 (323)
T ss_pred ceEEEEcCCCCCeeECCCCCCCCCCcceEE-EECCEEEEEcCCCCccccceEEEecCC
Confidence 3577889887654321 111111111111 12345777777653 345788764
No 478
>PRK05560 DNA gyrase subunit A; Validated
Probab=22.49 E-value=8.6e+02 Score=25.02 Aligned_cols=186 Identities=11% Similarity=0.047 Sum_probs=84.4
Q ss_pred eEEEEEeC--CCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEE-EeCCCC
Q 036314 122 VHSIAAET--SGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSV-VWPQQE 198 (347)
Q Consensus 122 V~~v~~s~--~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~-~~~~~~ 198 (347)
|..+.+.. +...++..+.+|.++.-++.+...... . +.....+... +.+..+ ......
T Consensus 593 v~~i~~~~~~~e~~lvlvTk~GyiKRi~l~~~~~~~r-------~-----------G~~~ikLke~-D~lv~v~~~~~~d 653 (805)
T PRK05560 593 TAILPVREFDDDKYLFFATKNGTVKKTSLSEFSNIRS-------N-----------GIIAINLDEG-DELIGVRLTDGDD 653 (805)
T ss_pred EEEEeccCCCCCCEEEEEeCCCEEEEEEhHHhhhccc-------C-----------CceeeccCCC-CEEEEEEEeCCCC
Confidence 44445542 567888899999999876543211000 0 0001112212 223222 223445
Q ss_pred eEEEEecCCcEEEEECCC---------CceeeeeeeCeeeE-EEEeeCCCCcEEEEecCCCcEEEEeCCC---CC---CC
Q 036314 199 TIYSASWDHSVRTWDVEM---------GKDLSDIFCGKALN-CIDIGGEGSALIAAGGSDPILRIWDPRK---PG---TS 262 (347)
Q Consensus 199 ~l~s~s~dg~v~vwd~~~---------~~~~~~~~~~~~~~-~~~~~~~~~~~la~~~~d~~i~iwd~~~---~~---~~ 262 (347)
.++..+..|.+..+.+.. |.....+..+..+. .+.+ .++...++..+..|.++...+.. .. ..
T Consensus 654 ~lll~T~~Gr~~r~~~~eIp~~gr~~~Gv~~i~L~~~E~Vv~~~~v-~~~~~~il~vTk~G~iKr~~l~e~~~~~R~~kG 732 (805)
T PRK05560 654 DILLATKNGKAIRFPESDVRPMGRTARGVRGIKLREGDEVVSMDVV-REDSQEILTVTENGYGKRTPVSEYRLQGRGGKG 732 (805)
T ss_pred EEEEEECCCcEEEEEhhhcCccCcccCCcccccCCCCCEEEEEEEE-cCCCcEEEEEEeCCeEEEEEHHHhhccCCCCCc
Confidence 566666667655444321 11122232233333 3333 22322455667788888775431 11 11
Q ss_pred CCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeecCCCEEEE
Q 036314 263 APVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVIS 331 (347)
Q Consensus 263 ~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s 331 (347)
.....+....+.+..+....... .++..+.+|.+..++... +.........|..+...++..+++
T Consensus 733 ~~~lkl~~~~d~lv~v~~v~~~~-~v~i~T~~G~~lrf~~~e---I~~~gR~a~GVk~I~L~~~D~V~~ 797 (805)
T PRK05560 733 VITIKITEKNGKLVGALPVDDDD-EIMLITDSGKLIRTRVSE---ISITGRNTQGVRLIRLDEGDKVVS 797 (805)
T ss_pred EEeeeccCCCCeEEEEEEecCCC-eEEEEecCCeEEEEEHHH---CCccccCCCCeeeEecCCCCEEEE
Confidence 11222223334444433322322 355567778877777653 111111233456666656666554
No 479
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=22.22 E-value=6.2e+02 Score=23.27 Aligned_cols=28 Identities=7% Similarity=0.176 Sum_probs=18.2
Q ss_pred eEEEeCCCCCeEEEEEeCCCcEEEEEcC
Q 036314 276 SACKWHNKSWFHLISASYDGKVMLWDLR 303 (347)
Q Consensus 276 ~~v~~s~~~~~~l~s~s~D~~i~lwd~~ 303 (347)
.-..|+||+.+.|.++...|...||=++
T Consensus 354 Php~FSPDgk~VlF~Sd~~G~~~vY~v~ 381 (386)
T PF14583_consen 354 PHPSFSPDGKWVLFRSDMEGPPAVYLVE 381 (386)
T ss_dssp ---EE-TTSSEEEEEE-TTSS-EEEEEE
T ss_pred CCCccCCCCCEEEEECCCCCCccEEEEe
Confidence 3478999999988888888888887443
No 480
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=21.38 E-value=5.4e+02 Score=22.24 Aligned_cols=114 Identities=18% Similarity=0.155 Sum_probs=62.9
Q ss_pred cceEEEEe-CCCCeEEEEecCC--cEEEEECCCCceeeeeeeCee--eEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCC
Q 036314 187 QCVSSVVW-PQQETIYSASWDH--SVRTWDVEMGKDLSDIFCGKA--LNCIDIGGEGSALIAAGGSDPILRIWDPRKPGT 261 (347)
Q Consensus 187 ~~v~~~~~-~~~~~l~s~s~dg--~v~vwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~ 261 (347)
....++.| .++..+-|++.-| .|+.+|+.+++.......... -..+++.. + .+..-.=.++...+||...-
T Consensus 45 aFTQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~~-d-~l~qLTWk~~~~f~yd~~tl-- 120 (264)
T PF05096_consen 45 AFTQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITILG-D-KLYQLTWKEGTGFVYDPNTL-- 120 (264)
T ss_dssp -EEEEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEET-T-EEEEEESSSSEEEEEETTTT--
T ss_pred ccCccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEEC-C-EEEEEEecCCeEEEEccccc--
Confidence 34566777 5666667776666 699999999987655543321 12334332 2 34434446788999998642
Q ss_pred CCCeEEecCC-CCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCcccee
Q 036314 262 SAPVFQFSSH-NSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSV 310 (347)
Q Consensus 262 ~~~~~~~~~h-~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~ 310 (347)
..+.++.-. .+| .+. .++.. |+......++..+|..+.+...+
T Consensus 121 -~~~~~~~y~~EGW--GLt--~dg~~-Li~SDGS~~L~~~dP~~f~~~~~ 164 (264)
T PF05096_consen 121 -KKIGTFPYPGEGW--GLT--SDGKR-LIMSDGSSRLYFLDPETFKEVRT 164 (264)
T ss_dssp -EEEEEEE-SSS----EEE--ECSSC-EEEE-SSSEEEEE-TTT-SEEEE
T ss_pred -eEEEEEecCCcce--EEE--cCCCE-EEEECCccceEEECCcccceEEE
Confidence 223333222 333 344 34544 55555567899999887655443
No 481
>PF06739 SBBP: Beta-propeller repeat; InterPro: IPR010620 This family is related to IPR001680 from INTERPRO and is likely to also form a beta-propeller. SBBP stands for Seven Bladed Beta Propeller.
Probab=20.72 E-value=1.8e+02 Score=16.40 Aligned_cols=22 Identities=23% Similarity=0.341 Sum_probs=17.9
Q ss_pred cceEEEEEeCCCCEEEEeeCCC
Q 036314 120 ASVHSIAAETSGNMVCSGSWDC 141 (347)
Q Consensus 120 ~~V~~v~~s~~~~~l~sgs~Dg 141 (347)
....++++.++|+..++|..++
T Consensus 13 ~~~~~IavD~~GNiYv~G~T~~ 34 (38)
T PF06739_consen 13 DYGNGIAVDSNGNIYVTGYTNG 34 (38)
T ss_pred eeEEEEEECCCCCEEEEEeecC
Confidence 3478899999999888887665
Done!