Query 036314
Match_columns 347
No_of_seqs 218 out of 1974
Neff 10.3
Searched_HMMs 29240
Date Mon Mar 25 19:40:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036314.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036314hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyh_C Platelet-activating fac 100.0 3E-48 1E-52 355.6 34.7 282 20-343 104-409 (410)
2 4gqb_B Methylosome protein 50; 100.0 1.3E-47 4.4E-52 343.1 33.9 285 20-344 26-330 (344)
3 3ow8_A WD repeat-containing pr 100.0 9.3E-47 3.2E-51 334.6 36.1 282 20-344 28-320 (321)
4 4g56_B MGC81050 protein; prote 100.0 4E-47 1.4E-51 341.9 32.3 288 19-345 37-343 (357)
5 2ynn_A Coatomer subunit beta'; 100.0 6.7E-46 2.3E-50 326.6 37.8 282 19-342 8-299 (304)
6 1got_B GT-beta; complex (GTP-b 100.0 2.8E-45 9.6E-50 327.7 36.9 283 20-342 51-340 (340)
7 2pbi_B Guanine nucleotide-bind 100.0 1.9E-44 6.5E-49 324.1 36.7 286 20-342 60-354 (354)
8 2hes_X YDR267CP; beta-propelle 100.0 2.1E-44 7.2E-49 320.7 33.1 295 20-344 10-327 (330)
9 3fm0_A Protein CIAO1; WDR39,SG 100.0 7.4E-44 2.5E-48 319.1 35.6 291 20-345 11-335 (345)
10 2xzm_R RACK1; ribosome, transl 100.0 1.1E-42 3.9E-47 311.1 37.3 283 19-344 16-339 (343)
11 4ery_A WD repeat-containing pr 100.0 1.1E-42 3.7E-47 306.8 36.4 282 20-343 19-310 (312)
12 3frx_A Guanine nucleotide-bind 100.0 9.1E-43 3.1E-47 308.7 35.9 279 20-344 13-316 (319)
13 3iz6_a 40S ribosomal protein R 100.0 1.7E-43 5.7E-48 320.9 30.1 294 20-344 62-374 (380)
14 1nr0_A Actin interacting prote 100.0 1.1E-42 3.6E-47 334.5 35.2 317 20-343 186-609 (611)
15 1erj_A Transcriptional repress 100.0 3E-42 1E-46 314.1 35.5 282 22-345 62-389 (393)
16 1nr0_A Actin interacting prote 100.0 4.1E-42 1.4E-46 330.5 35.8 284 18-343 53-395 (611)
17 2ymu_A WD-40 repeat protein; u 100.0 7.9E-42 2.7E-46 325.7 36.5 276 19-342 298-577 (577)
18 2ynn_A Coatomer subunit beta'; 100.0 2.3E-41 7.8E-46 297.6 33.9 248 56-344 5-258 (304)
19 4gqb_B Methylosome protein 50; 100.0 1.8E-40 6E-45 296.8 30.3 242 22-305 80-332 (344)
20 1vyh_C Platelet-activating fac 100.0 2.1E-40 7.1E-45 303.6 31.3 255 48-344 92-368 (410)
21 2ymu_A WD-40 repeat protein; u 100.0 1.3E-39 4.5E-44 310.4 37.1 277 19-343 257-537 (577)
22 3ow8_A WD repeat-containing pr 100.0 5.3E-40 1.8E-44 291.2 31.7 254 54-344 22-278 (321)
23 1sq9_A Antiviral protein SKI8; 100.0 9.6E-40 3.3E-44 296.9 32.8 296 18-344 10-394 (397)
24 3k26_A Polycomb protein EED; W 100.0 9.8E-40 3.3E-44 292.9 31.6 287 20-344 14-365 (366)
25 4aow_A Guanine nucleotide-bind 100.0 6.1E-39 2.1E-43 285.2 35.6 281 20-344 34-336 (340)
26 3dm0_A Maltose-binding peripla 100.0 3.3E-39 1.1E-43 314.7 36.7 283 20-344 378-692 (694)
27 2pm7_B Protein transport prote 100.0 3.9E-39 1.3E-43 282.4 31.6 253 58-344 3-284 (297)
28 3odt_A Protein DOA1; ubiquitin 100.0 1.3E-38 4.5E-43 279.7 33.7 278 19-344 13-295 (313)
29 3i2n_A WD repeat-containing pr 100.0 2.9E-39 9.9E-44 289.1 30.0 293 20-345 14-353 (357)
30 3ei3_B DNA damage-binding prot 100.0 1.1E-38 3.9E-43 289.0 33.6 282 20-344 69-381 (383)
31 2pm7_B Protein transport prote 100.0 7.4E-39 2.5E-43 280.6 31.2 252 20-304 5-285 (297)
32 3iz6_a 40S ribosomal protein R 100.0 9.7E-40 3.3E-44 296.2 26.2 266 45-344 46-328 (380)
33 1gxr_A ESG1, transducin-like e 100.0 5.3E-38 1.8E-42 278.4 36.6 279 21-343 48-335 (337)
34 2pm9_A Protein WEB1, protein t 100.0 1.4E-39 4.6E-44 297.6 26.9 294 20-344 63-413 (416)
35 2j04_B YDR362CP, TAU91; beta p 100.0 8E-40 2.8E-44 307.2 24.6 276 38-343 176-515 (524)
36 2pm9_A Protein WEB1, protein t 100.0 2.6E-39 8.7E-44 295.7 26.9 293 23-344 11-336 (416)
37 4g56_B MGC81050 protein; prote 100.0 7.8E-39 2.7E-43 287.8 29.1 281 29-344 10-300 (357)
38 3bg1_A Protein SEC13 homolog; 100.0 3.2E-39 1.1E-43 285.5 25.1 253 58-344 7-292 (316)
39 1p22_A F-BOX/WD-repeat protein 100.0 6E-38 2E-42 289.3 34.2 274 20-344 129-413 (435)
40 3vl1_A 26S proteasome regulato 100.0 1.2E-38 4.1E-43 291.9 29.3 278 25-344 57-364 (420)
41 3zwl_B Eukaryotic translation 100.0 3.4E-37 1.2E-41 276.5 38.0 291 20-344 28-345 (369)
42 3frx_A Guanine nucleotide-bind 100.0 8.6E-38 2.9E-42 276.7 33.5 249 56-343 9-265 (319)
43 1k8k_C P40, ARP2/3 complex 41 100.0 8.7E-38 3E-42 281.2 33.9 286 21-344 5-360 (372)
44 4gga_A P55CDC, cell division c 100.0 1.7E-37 5.9E-42 285.0 36.5 275 26-344 107-394 (420)
45 4ggc_A P55CDC, cell division c 100.0 3.5E-37 1.2E-41 271.3 36.8 276 26-345 27-315 (318)
46 1got_B GT-beta; complex (GTP-b 100.0 1.3E-37 4.5E-42 277.9 34.0 251 55-344 46-300 (340)
47 3fm0_A Protein CIAO1; WDR39,SG 100.0 3.3E-38 1.1E-42 282.4 29.7 257 20-310 57-341 (345)
48 2hes_X YDR267CP; beta-propelle 100.0 5.5E-38 1.9E-42 279.2 30.6 256 55-343 5-278 (330)
49 4h5i_A Guanine nucleotide-exch 100.0 1.2E-38 4.1E-43 287.4 26.2 291 25-344 15-342 (365)
50 4e54_B DNA damage-binding prot 100.0 1.4E-38 4.6E-43 293.7 27.0 282 21-344 116-429 (435)
51 3dwl_C Actin-related protein 2 100.0 3.5E-39 1.2E-43 291.5 21.5 286 22-342 9-376 (377)
52 3bg1_A Protein SEC13 homolog; 100.0 1.4E-38 4.8E-43 281.4 24.8 253 19-303 8-292 (316)
53 1r5m_A SIR4-interacting protei 100.0 1.8E-37 6.2E-42 283.5 32.9 277 22-343 106-423 (425)
54 3gre_A Serine/threonine-protei 100.0 3.1E-38 1E-42 291.1 26.6 286 21-342 60-437 (437)
55 2pbi_B Guanine nucleotide-bind 100.0 7.4E-37 2.5E-41 274.6 34.5 254 55-344 55-314 (354)
56 2xzm_R RACK1; ribosome, transl 100.0 9E-37 3.1E-41 272.8 34.0 254 55-344 12-284 (343)
57 1r5m_A SIR4-interacting protei 100.0 5.5E-37 1.9E-41 280.3 32.4 293 22-344 43-360 (425)
58 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.8E-36 6.2E-41 280.1 35.4 272 19-344 113-390 (445)
59 1yfq_A Cell cycle arrest prote 100.0 8.7E-37 3E-41 271.7 31.0 284 19-337 6-315 (342)
60 4aez_A CDC20, WD repeat-contai 100.0 1.2E-36 4.1E-41 277.7 32.7 278 22-344 89-379 (401)
61 3vl1_A 26S proteasome regulato 100.0 3.6E-36 1.2E-40 275.5 35.4 298 25-343 98-417 (420)
62 2ovr_B FBW7, F-BOX/WD repeat p 100.0 6.6E-36 2.2E-40 276.4 37.3 272 20-344 155-441 (445)
63 3dw8_B Serine/threonine-protei 100.0 1.1E-36 3.9E-41 280.9 30.6 297 19-342 23-443 (447)
64 3v7d_B Cell division control p 100.0 1.1E-35 3.8E-40 276.0 36.8 299 19-344 116-420 (464)
65 2oaj_A Protein SNI1; WD40 repe 100.0 3.7E-36 1.3E-40 300.0 35.2 307 21-344 14-604 (902)
66 1erj_A Transcriptional repress 100.0 5.1E-36 1.7E-40 272.9 32.9 291 19-344 10-340 (393)
67 3mkq_A Coatomer beta'-subunit; 100.0 7E-36 2.4E-40 295.7 35.3 283 20-343 9-300 (814)
68 3v7d_B Cell division control p 100.0 2E-35 6.9E-40 274.3 36.3 284 20-341 158-459 (464)
69 3sfz_A APAF-1, apoptotic pepti 100.0 4.7E-36 1.6E-40 309.8 34.6 281 20-343 611-911 (1249)
70 3mmy_A MRNA export factor; mRN 100.0 5.8E-36 2E-40 268.3 30.5 282 19-342 34-343 (368)
71 4ery_A WD repeat-containing pr 100.0 1.1E-35 3.9E-40 261.8 30.9 247 55-344 14-267 (312)
72 3f3f_A Nucleoporin SEH1; struc 100.0 1.4E-35 4.6E-40 263.4 29.7 261 58-344 5-336 (351)
73 4aow_A Guanine nucleotide-bind 100.0 7.9E-35 2.7E-39 258.7 32.7 252 56-344 30-285 (340)
74 2oaj_A Protein SNI1; WD40 repe 100.0 2.7E-35 9.3E-40 293.7 32.6 305 23-343 97-659 (902)
75 3jrp_A Fusion protein of prote 100.0 2.7E-35 9.1E-40 265.3 29.5 256 55-344 2-286 (379)
76 1pgu_A Actin interacting prote 100.0 1.9E-34 6.5E-39 276.3 36.4 287 20-344 14-327 (615)
77 3f3f_A Nucleoporin SEH1; struc 100.0 1.3E-34 4.5E-39 257.0 32.5 278 18-310 5-343 (351)
78 3dm0_A Maltose-binding peripla 100.0 1.3E-34 4.3E-39 282.4 33.4 252 56-344 374-631 (694)
79 4gga_A P55CDC, cell division c 100.0 2.9E-34 9.9E-39 263.5 33.8 261 20-319 143-410 (420)
80 2aq5_A Coronin-1A; WD40 repeat 100.0 3.4E-35 1.2E-39 268.1 26.2 281 30-344 40-341 (402)
81 1gxr_A ESG1, transducin-like e 100.0 4.2E-34 1.4E-38 253.3 31.8 282 22-344 7-295 (337)
82 4a11_B DNA excision repair pro 100.0 5.6E-34 1.9E-38 259.1 33.1 286 19-344 38-364 (408)
83 3sfz_A APAF-1, apoptotic pepti 100.0 1.2E-34 4.1E-39 299.3 31.5 306 20-344 739-1157(1249)
84 3jrp_A Fusion protein of prote 100.0 3E-34 1E-38 258.4 30.1 254 19-305 6-288 (379)
85 1pgu_A Actin interacting prote 100.0 2.2E-34 7.4E-39 275.8 29.9 275 19-343 58-364 (615)
86 2j04_B YDR362CP, TAU91; beta p 100.0 3.2E-35 1.1E-39 276.0 23.5 239 82-343 175-426 (524)
87 3odt_A Protein DOA1; ubiquitin 100.0 2E-33 6.8E-38 246.5 33.2 244 55-344 9-254 (313)
88 2xyi_A Probable histone-bindin 100.0 1.1E-33 3.7E-38 260.6 32.2 264 58-344 122-409 (430)
89 3gre_A Serine/threonine-protei 100.0 1.4E-34 4.9E-39 266.5 24.0 277 35-344 39-358 (437)
90 4gq1_A NUP37; propeller, trans 100.0 2.5E-34 8.6E-39 261.8 24.3 273 37-342 32-386 (393)
91 4e54_B DNA damage-binding prot 100.0 4.8E-34 1.6E-38 263.3 26.3 252 58-344 113-386 (435)
92 4aez_A CDC20, WD repeat-contai 100.0 2.4E-33 8E-38 255.9 30.2 248 22-311 132-387 (401)
93 3k26_A Polycomb protein EED; W 100.0 4.7E-34 1.6E-38 255.9 24.5 269 22-304 67-366 (366)
94 3dwl_C Actin-related protein 2 100.0 2E-34 6.8E-39 260.3 22.1 248 59-343 6-279 (377)
95 2j04_A TAU60, YPL007P, hypothe 100.0 3.9E-34 1.3E-38 264.1 24.1 262 22-345 13-297 (588)
96 4ggc_A P55CDC, cell division c 100.0 3E-32 1E-36 239.7 34.0 248 20-306 63-317 (318)
97 1sq9_A Antiviral protein SKI8; 100.0 4.1E-33 1.4E-37 253.2 28.2 254 56-344 8-321 (397)
98 3ei3_B DNA damage-binding prot 100.0 9.4E-33 3.2E-37 250.0 30.2 253 55-344 64-338 (383)
99 1k8k_C P40, ARP2/3 complex 41 100.0 1.3E-32 4.5E-37 247.3 29.9 250 59-345 3-274 (372)
100 3i2n_A WD repeat-containing pr 100.0 4.3E-33 1.5E-37 249.0 26.4 251 22-306 63-355 (357)
101 4a11_B DNA excision repair pro 100.0 1.9E-32 6.5E-37 249.0 30.9 297 21-345 96-405 (408)
102 1yfq_A Cell cycle arrest prote 100.0 1.2E-32 4.2E-37 244.8 29.0 246 58-344 5-281 (342)
103 3lrv_A PRE-mRNA-splicing facto 100.0 6.9E-33 2.4E-37 247.5 27.1 268 34-342 47-330 (343)
104 3jro_A Fusion protein of prote 100.0 2.1E-33 7.3E-38 275.8 25.6 254 57-344 2-284 (753)
105 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.1E-31 3.9E-36 248.4 33.6 279 24-343 4-389 (450)
106 3mkq_A Coatomer beta'-subunit; 100.0 2.8E-32 9.7E-37 269.9 31.2 247 56-344 5-258 (814)
107 2xyi_A Probable histone-bindin 100.0 3.2E-32 1.1E-36 250.7 28.1 259 20-305 124-411 (430)
108 4gq1_A NUP37; propeller, trans 100.0 2.7E-32 9.4E-37 248.3 26.4 269 21-303 86-388 (393)
109 3jro_A Fusion protein of prote 100.0 3.5E-32 1.2E-36 267.2 27.8 254 19-305 4-286 (753)
110 3dw8_B Serine/threonine-protei 100.0 4.7E-32 1.6E-36 250.0 26.9 276 62-344 26-372 (447)
111 3zwl_B Eukaryotic translation 100.0 4.3E-31 1.5E-35 236.7 31.0 256 20-309 70-351 (369)
112 1p22_A F-BOX/WD-repeat protein 100.0 6.4E-31 2.2E-35 242.3 31.3 231 60-343 129-363 (435)
113 2aq5_A Coronin-1A; WD40 repeat 100.0 2.1E-31 7.2E-36 242.9 24.1 246 19-306 76-344 (402)
114 2w18_A PALB2, fancn, partner a 100.0 8.3E-31 2.8E-35 228.2 25.3 256 37-343 56-355 (356)
115 3mmy_A MRNA export factor; mRN 100.0 2.4E-30 8.1E-35 231.8 27.6 252 54-344 29-303 (368)
116 1l0q_A Surface layer protein; 100.0 4.8E-29 1.6E-33 226.0 36.2 263 36-344 3-274 (391)
117 3bws_A Protein LP49; two-domai 100.0 2.2E-29 7.6E-34 231.3 34.4 275 25-344 123-431 (433)
118 4h5i_A Guanine nucleotide-exch 100.0 3.8E-30 1.3E-34 231.8 28.0 244 20-305 69-344 (365)
119 3vu4_A KMHSV2; beta-propeller 100.0 6.5E-30 2.2E-34 229.4 28.6 239 56-344 11-270 (355)
120 3vu4_A KMHSV2; beta-propeller 100.0 2.6E-29 9E-34 225.5 32.2 272 20-343 15-334 (355)
121 2j04_A TAU60, YPL007P, hypothe 100.0 1.6E-30 5.4E-35 240.2 21.3 267 15-334 43-350 (588)
122 3lrv_A PRE-mRNA-splicing facto 100.0 4.6E-29 1.6E-33 222.7 25.1 230 79-343 47-290 (343)
123 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.1E-28 7.1E-33 226.5 27.9 245 22-304 100-391 (450)
124 2w18_A PALB2, fancn, partner a 100.0 1E-28 3.5E-33 215.0 23.1 211 22-303 109-356 (356)
125 1l0q_A Surface layer protein; 100.0 2.1E-26 7.1E-31 208.7 35.0 275 25-343 32-340 (391)
126 3bws_A Protein LP49; two-domai 100.0 1.8E-26 6.2E-31 211.9 27.3 265 40-344 94-389 (433)
127 2hqs_A Protein TOLB; TOLB, PAL 99.9 3.4E-25 1.2E-29 202.8 29.5 259 20-326 113-408 (415)
128 2hqs_A Protein TOLB; TOLB, PAL 99.9 3.4E-25 1.2E-29 202.8 28.9 275 25-343 63-385 (415)
129 1nir_A Nitrite reductase; hemo 99.9 1.1E-23 3.9E-28 198.8 29.5 279 32-345 145-458 (543)
130 1nir_A Nitrite reductase; hemo 99.9 9.4E-23 3.2E-27 192.5 34.2 279 27-344 181-513 (543)
131 1ri6_A Putative isomerase YBHE 99.9 6.4E-23 2.2E-27 181.8 27.8 270 37-342 7-305 (343)
132 2ojh_A Uncharacterized protein 99.9 3E-23 1E-27 179.6 23.1 255 39-336 16-293 (297)
133 3u4y_A Uncharacterized protein 99.9 9.3E-22 3.2E-26 173.9 28.9 271 35-344 10-303 (331)
134 2ecf_A Dipeptidyl peptidase IV 99.9 7.1E-22 2.4E-26 193.6 27.1 292 24-343 36-411 (741)
135 1pby_B Quinohemoprotein amine 99.9 2E-21 6.9E-26 171.7 23.5 263 36-344 2-309 (337)
136 2z3z_A Dipeptidyl aminopeptida 99.9 4.2E-21 1.4E-25 187.2 27.4 277 25-343 82-433 (706)
137 3vgz_A Uncharacterized protein 99.9 5.6E-20 1.9E-24 163.7 31.0 267 23-333 39-332 (353)
138 1k32_A Tricorn protease; prote 99.9 8E-21 2.7E-25 193.0 28.2 324 8-344 36-460 (1045)
139 2ecf_A Dipeptidyl peptidase IV 99.9 4.9E-21 1.7E-25 187.6 25.6 275 25-342 109-456 (741)
140 3hfq_A Uncharacterized protein 99.9 3.6E-20 1.2E-24 165.0 28.5 274 44-342 15-314 (347)
141 1xfd_A DIP, dipeptidyl aminope 99.9 2.4E-21 8.1E-26 189.3 22.2 286 25-343 17-391 (723)
142 1k32_A Tricorn protease; prote 99.9 1.1E-20 3.7E-25 192.0 25.3 284 21-343 200-500 (1045)
143 2ojh_A Uncharacterized protein 99.9 2.4E-20 8.3E-25 161.2 23.4 222 84-344 16-257 (297)
144 2oit_A Nucleoporin 214KDA; NH2 99.9 2.5E-20 8.7E-25 171.3 22.5 205 24-259 36-279 (434)
145 3u4y_A Uncharacterized protein 99.9 3.5E-19 1.2E-23 157.4 26.5 229 81-344 11-251 (331)
146 3o4h_A Acylamino-acid-releasin 99.9 3.9E-20 1.3E-24 176.5 21.8 264 24-342 21-312 (582)
147 1ri6_A Putative isomerase YBHE 99.8 5E-19 1.7E-23 156.6 26.1 267 22-324 35-331 (343)
148 1jmx_B Amine dehydrogenase; ox 99.8 1.2E-18 4E-23 154.7 25.8 272 29-344 4-324 (349)
149 2z3z_A Dipeptidyl aminopeptida 99.8 3E-19 1E-23 174.1 22.8 281 28-342 29-388 (706)
150 1xfd_A DIP, dipeptidyl aminope 99.8 8.7E-19 3E-23 171.2 24.6 292 26-331 62-426 (723)
151 3hfq_A Uncharacterized protein 99.8 2.1E-18 7.3E-23 153.5 24.8 253 22-307 37-322 (347)
152 3scy_A Hypothetical bacterial 99.8 2.9E-17 1E-21 147.0 31.2 283 36-342 14-334 (361)
153 1z68_A Fibroblast activation p 99.8 6.4E-19 2.2E-23 172.2 22.0 281 29-343 20-389 (719)
154 3scy_A Hypothetical bacterial 99.8 2E-17 6.9E-22 148.0 29.9 279 23-324 48-360 (361)
155 2oit_A Nucleoporin 214KDA; NH2 99.8 2.7E-19 9.2E-24 164.5 17.5 210 119-344 36-277 (434)
156 3o4h_A Acylamino-acid-releasin 99.8 2.4E-18 8.4E-23 164.0 20.6 233 64-343 21-274 (582)
157 3vgz_A Uncharacterized protein 99.8 1.3E-16 4.4E-21 141.8 27.3 236 64-344 40-302 (353)
158 1jof_A Carboxy-CIS,CIS-muconat 99.8 1.8E-16 6.2E-21 142.3 26.2 272 37-343 4-339 (365)
159 3pe7_A Oligogalacturonate lyas 99.8 1.6E-16 5.6E-21 143.2 22.3 272 30-343 41-380 (388)
160 3azo_A Aminopeptidase; POP fam 99.8 3.7E-16 1.3E-20 151.1 26.2 281 20-342 19-364 (662)
161 1z68_A Fibroblast activation p 99.7 1.2E-16 4E-21 156.1 19.7 287 27-343 62-441 (719)
162 4a5s_A Dipeptidyl peptidase 4 99.7 3.2E-16 1.1E-20 153.7 22.4 276 24-334 16-383 (740)
163 1pby_B Quinohemoprotein amine 99.7 5.9E-16 2E-20 136.4 21.7 238 26-314 35-320 (337)
164 1jof_A Carboxy-CIS,CIS-muconat 99.7 9.2E-16 3.2E-20 137.7 21.5 248 25-305 40-342 (365)
165 1q7f_A NHL, brain tumor CG1071 99.7 4.1E-14 1.4E-18 122.2 29.6 241 20-307 25-283 (286)
166 3fvz_A Peptidyl-glycine alpha- 99.7 1.5E-13 5.1E-18 121.4 29.9 245 65-343 24-320 (329)
167 2dg1_A DRP35, lactonase; beta 99.7 5.3E-14 1.8E-18 124.2 26.2 270 25-335 6-300 (333)
168 3fvz_A Peptidyl-glycine alpha- 99.7 1.1E-13 3.8E-18 122.3 27.6 247 24-304 23-322 (329)
169 2gop_A Trilobed protease; beta 99.6 1.2E-13 4.2E-18 122.4 25.4 256 25-342 15-328 (347)
170 1q7f_A NHL, brain tumor CG1071 99.6 5E-13 1.7E-17 115.4 28.2 234 62-344 27-279 (286)
171 2oiz_A Aromatic amine dehydrog 99.6 6.3E-14 2.2E-18 125.5 23.1 256 43-344 29-333 (361)
172 4a5s_A Dipeptidyl peptidase 4 99.6 1.4E-14 4.6E-19 142.1 19.4 233 65-342 17-350 (740)
173 3pe7_A Oligogalacturonate lyas 99.6 9.1E-14 3.1E-18 125.2 22.4 249 53-344 19-328 (388)
174 3c5m_A Oligogalacturonate lyas 99.6 4.7E-14 1.6E-18 127.2 19.7 272 24-343 35-380 (396)
175 3azo_A Aminopeptidase; POP fam 99.6 7.6E-14 2.6E-18 134.9 21.7 241 59-342 18-320 (662)
176 2bkl_A Prolyl endopeptidase; m 99.6 2.6E-13 8.8E-18 132.1 25.5 270 34-343 78-395 (695)
177 1jmx_B Amine dehydrogenase; ox 99.6 2.1E-13 7.1E-18 120.7 22.4 263 26-314 44-335 (349)
178 2xdw_A Prolyl endopeptidase; a 99.6 1.9E-12 6.6E-17 126.2 30.4 251 22-306 122-416 (710)
179 2bkl_A Prolyl endopeptidase; m 99.6 7.7E-14 2.6E-18 135.8 17.5 244 22-306 118-399 (695)
180 3e5z_A Putative gluconolactona 99.6 2.7E-12 9.4E-17 111.3 25.0 240 57-340 20-282 (296)
181 2xdw_A Prolyl endopeptidase; a 99.5 2.8E-12 9.5E-17 125.1 27.2 244 63-343 123-412 (710)
182 2oiz_A Aromatic amine dehydrog 99.5 4.1E-12 1.4E-16 113.7 24.2 257 29-325 54-357 (361)
183 3dsm_A Uncharacterized protein 99.5 4.4E-11 1.5E-15 105.5 29.4 257 44-343 16-300 (328)
184 2z2n_A Virginiamycin B lyase; 99.5 6E-10 2.1E-14 96.0 33.9 272 23-340 13-291 (299)
185 3c5m_A Oligogalacturonate lyas 99.5 3.5E-11 1.2E-15 108.3 26.7 228 30-303 86-381 (396)
186 3no2_A Uncharacterized protein 99.5 2.6E-11 8.7E-16 104.3 24.4 217 33-291 3-230 (276)
187 2gop_A Trilobed protease; beta 99.5 1.3E-11 4.6E-16 109.2 22.4 232 25-317 59-342 (347)
188 3e5z_A Putative gluconolactona 99.5 3.1E-11 1.1E-15 104.6 23.8 238 22-305 25-287 (296)
189 1rwi_B Serine/threonine-protei 99.5 5.2E-11 1.8E-15 101.5 24.6 236 26-306 25-266 (270)
190 2dg1_A DRP35, lactonase; beta 99.4 2.9E-11 1E-15 106.5 22.3 232 65-343 6-261 (333)
191 3dsm_A Uncharacterized protein 99.4 1.2E-10 4.3E-15 102.6 26.3 251 26-323 45-319 (328)
192 1qks_A Cytochrome CD1 nitrite 99.4 3.2E-10 1.1E-14 107.0 29.6 224 81-344 168-420 (567)
193 1rwi_B Serine/threonine-protei 99.4 1.9E-10 6.4E-15 98.0 25.5 234 66-344 25-263 (270)
194 1yr2_A Prolyl oligopeptidase; 99.4 2.4E-11 8.4E-16 119.0 22.0 247 22-306 160-443 (741)
195 3no2_A Uncharacterized protein 99.4 4.2E-10 1.4E-14 96.7 25.4 207 81-332 6-230 (276)
196 1yr2_A Prolyl oligopeptidase; 99.4 1.4E-10 4.9E-15 113.5 24.9 270 34-343 117-439 (741)
197 1pjx_A Dfpase, DIISOPROPYLFLUO 99.4 5.3E-10 1.8E-14 97.3 25.9 243 65-343 18-297 (314)
198 1pjx_A Dfpase, DIISOPROPYLFLUO 99.3 1.2E-09 4.1E-14 95.1 25.7 238 26-304 19-299 (314)
199 1xip_A Nucleoporin NUP159; bet 99.3 3.2E-11 1.1E-15 107.9 15.7 179 121-331 39-230 (388)
200 1qks_A Cytochrome CD1 nitrite 99.3 2.7E-09 9.3E-14 100.7 28.9 275 36-344 168-476 (567)
201 2qc5_A Streptogramin B lactona 99.3 4.6E-08 1.6E-12 84.1 32.7 270 24-341 19-296 (300)
202 3hrp_A Uncharacterized protein 99.3 7.3E-09 2.5E-13 94.1 28.7 232 66-342 132-407 (409)
203 1xip_A Nucleoporin NUP159; bet 99.3 4.9E-10 1.7E-14 100.2 19.2 181 66-290 39-230 (388)
204 2z2n_A Virginiamycin B lyase; 99.2 4.7E-08 1.6E-12 84.0 30.4 238 60-342 10-252 (299)
205 2mad_H Methylamine dehydrogena 99.2 1.6E-07 5.5E-12 84.1 32.7 258 46-344 48-349 (373)
206 3g4e_A Regucalcin; six bladed 99.2 6.1E-08 2.1E-12 83.9 28.3 219 66-324 14-249 (297)
207 3iuj_A Prolyl endopeptidase; h 99.2 4.6E-09 1.6E-13 102.1 22.9 241 62-343 126-403 (693)
208 2qc5_A Streptogramin B lactona 99.1 2.3E-07 7.7E-12 79.7 29.4 237 61-342 16-257 (300)
209 3iuj_A Prolyl endopeptidase; h 99.1 1.1E-08 3.7E-13 99.5 22.5 244 22-306 126-407 (693)
210 2ghs_A AGR_C_1268P; regucalcin 99.1 4E-07 1.4E-11 79.9 29.0 224 68-335 52-293 (326)
211 3hrp_A Uncharacterized protein 99.0 1.3E-07 4.4E-12 85.8 25.4 237 25-302 131-408 (409)
212 3sjl_D Methylamine dehydrogena 99.0 1.5E-07 5.3E-12 83.8 23.3 255 44-344 58-362 (386)
213 3dr2_A Exported gluconolactona 99.0 2.1E-07 7.3E-12 80.7 23.7 239 58-340 38-302 (305)
214 3q7m_A Lipoprotein YFGL, BAMB; 99.0 3.6E-07 1.2E-11 81.7 25.4 271 34-342 102-375 (376)
215 3g4e_A Regucalcin; six bladed 99.0 1E-06 3.4E-11 76.2 26.5 216 35-293 25-262 (297)
216 2hz6_A Endoplasmic reticulum t 98.9 3E-09 1E-13 95.3 6.9 191 82-319 11-206 (369)
217 3dr2_A Exported gluconolactona 98.9 9.9E-07 3.4E-11 76.5 22.7 222 25-296 45-299 (305)
218 2ghs_A AGR_C_1268P; regucalcin 98.8 8.4E-06 2.9E-10 71.4 28.6 215 35-294 61-293 (326)
219 1mda_H Methylamine dehydrogena 98.8 1.9E-07 6.5E-12 83.1 17.8 265 36-324 33-365 (368)
220 2hz6_A Endoplasmic reticulum t 98.8 4E-09 1.4E-13 94.5 6.9 181 34-259 8-193 (369)
221 3c75_H MADH, methylamine dehyd 98.8 4.4E-07 1.5E-11 82.2 19.1 223 90-345 99-402 (426)
222 3hxj_A Pyrrolo-quinoline quino 98.8 2.3E-07 7.9E-12 81.0 15.8 139 192-342 182-321 (330)
223 3q7m_A Lipoprotein YFGL, BAMB; 98.7 1.3E-05 4.3E-10 71.6 27.0 260 35-343 53-335 (376)
224 2mad_H Methylamine dehydrogena 98.7 2.6E-05 8.8E-10 69.7 28.5 240 29-311 70-357 (373)
225 1mda_H Methylamine dehydrogena 98.7 7.7E-07 2.6E-11 79.2 18.0 67 278-345 269-346 (368)
226 3hxj_A Pyrrolo-quinoline quino 98.7 5.2E-07 1.8E-11 78.8 16.4 254 32-342 27-281 (330)
227 2qe8_A Uncharacterized protein 98.7 1.5E-06 5E-11 76.9 19.4 245 65-336 17-312 (343)
228 2ece_A 462AA long hypothetical 98.7 6.2E-06 2.1E-10 74.3 22.4 192 81-304 97-352 (462)
229 3sjl_D Methylamine dehydrogena 98.6 7.3E-06 2.5E-10 73.0 21.8 243 30-312 83-371 (386)
230 2qe8_A Uncharacterized protein 98.6 3.2E-06 1.1E-10 74.7 19.5 201 120-343 17-276 (343)
231 3c75_H MADH, methylamine dehyd 98.6 2.4E-06 8.2E-11 77.3 18.1 248 45-311 99-409 (426)
232 1npe_A Nidogen, entactin; glyc 98.6 0.00017 5.7E-09 60.9 28.5 245 37-326 3-261 (267)
233 1yiq_A Quinohemoprotein alcoho 98.6 9.3E-06 3.2E-10 78.6 22.9 292 35-344 70-504 (689)
234 1yiq_A Quinohemoprotein alcoho 98.5 2.2E-05 7.5E-10 76.0 22.3 76 248-328 454-531 (689)
235 1kb0_A Quinohemoprotein alcoho 98.4 6.5E-05 2.2E-09 72.5 23.6 267 34-328 127-533 (677)
236 1kb0_A Quinohemoprotein alcoho 98.4 7.5E-05 2.6E-09 72.1 23.4 284 35-344 77-506 (677)
237 2iwa_A Glutamine cyclotransfer 98.4 9.7E-05 3.3E-09 62.3 20.6 190 121-343 22-235 (266)
238 1npe_A Nidogen, entactin; glyc 98.3 0.0011 3.8E-08 55.8 28.1 219 90-343 10-236 (267)
239 3nok_A Glutaminyl cyclase; bet 98.3 0.00017 5.9E-09 60.2 19.8 177 122-332 57-253 (268)
240 3nok_A Glutaminyl cyclase; bet 98.3 6E-05 2.1E-09 63.0 16.6 185 24-245 54-253 (268)
241 2iwa_A Glutamine cyclotransfer 98.3 0.0002 7E-09 60.3 20.0 198 25-258 21-237 (266)
242 3nol_A Glutamine cyclotransfer 98.2 0.00035 1.2E-08 58.3 20.8 176 122-332 45-243 (262)
243 2ece_A 462AA long hypothetical 98.2 0.0019 6.5E-08 58.3 26.8 216 37-291 98-399 (462)
244 3nol_A Glutamine cyclotransfer 98.2 0.0003 1E-08 58.8 18.8 185 24-245 42-243 (262)
245 1fwx_A Nitrous oxide reductase 98.1 0.00023 7.9E-09 66.4 18.8 189 129-343 99-359 (595)
246 1kv9_A Type II quinohemoprotei 98.1 0.00062 2.1E-08 65.6 22.5 291 35-344 66-487 (668)
247 1fwx_A Nitrous oxide reductase 98.1 0.0003 1E-08 65.6 18.9 96 207-304 254-361 (595)
248 2fp8_A Strictosidine synthase; 98.1 0.0046 1.6E-07 53.6 26.9 133 207-343 165-311 (322)
249 3v65_B Low-density lipoprotein 98.1 0.0044 1.5E-07 55.4 25.8 216 88-342 94-315 (386)
250 3mbr_X Glutamine cyclotransfer 98.0 0.0015 5.1E-08 54.0 20.0 184 25-245 21-222 (243)
251 1k3i_A Galactose oxidase precu 98.0 0.0032 1.1E-07 60.5 25.2 270 34-334 197-530 (656)
252 4a2l_A BT_4663, two-component 98.0 0.015 5.1E-07 57.1 33.5 281 24-342 214-523 (795)
253 4a2l_A BT_4663, two-component 98.0 0.016 5.3E-07 57.0 31.0 268 23-330 308-601 (795)
254 2fp8_A Strictosidine synthase; 98.0 0.0067 2.3E-07 52.5 24.9 232 28-304 22-313 (322)
255 3v65_B Low-density lipoprotein 97.9 0.0094 3.2E-07 53.2 30.7 245 35-323 87-337 (386)
256 2p4o_A Hypothetical protein; p 97.9 0.0094 3.2E-07 51.2 25.6 215 66-324 33-263 (306)
257 1k3i_A Galactose oxidase precu 97.8 0.0011 3.7E-08 63.8 18.3 211 91-335 220-476 (656)
258 3mbr_X Glutamine cyclotransfer 97.8 0.0011 3.7E-08 54.8 15.6 147 187-342 21-176 (243)
259 1kv9_A Type II quinohemoprotei 97.7 0.008 2.7E-07 57.8 22.9 61 248-313 437-497 (668)
260 2xbg_A YCF48-like protein; pho 97.7 0.019 6.6E-07 49.8 28.4 273 24-343 35-320 (327)
261 3v64_C Agrin; beta propeller, 97.7 0.021 7.2E-07 50.2 32.6 242 27-312 36-283 (349)
262 3v64_C Agrin; beta propeller, 97.7 0.026 8.9E-07 49.6 28.3 213 89-341 52-271 (349)
263 2xe4_A Oligopeptidase B; hydro 97.6 0.0096 3.3E-07 58.1 21.5 192 121-341 175-394 (751)
264 3amr_A 3-phytase; beta-propell 97.6 0.031 1.1E-06 48.7 25.3 198 36-257 41-262 (355)
265 3p5b_L Low density lipoprotein 97.6 0.039 1.3E-06 49.4 34.1 247 37-322 85-338 (400)
266 2ad6_A Methanol dehydrogenase 97.6 0.035 1.2E-06 52.3 24.0 61 247-312 442-502 (571)
267 2xe4_A Oligopeptidase B; hydro 97.4 0.014 4.8E-07 57.0 20.4 112 26-150 175-304 (751)
268 3v9f_A Two-component system se 97.4 0.1 3.5E-06 51.0 32.7 282 24-342 257-565 (781)
269 3sov_A LRP-6, low-density lipo 97.4 0.054 1.8E-06 46.8 25.5 218 89-342 12-235 (318)
270 1ijq_A LDL receptor, low-densi 97.4 0.058 2E-06 46.5 28.6 216 90-342 10-235 (316)
271 1flg_A Protein (quinoprotein e 97.3 0.11 3.7E-06 49.1 27.0 75 248-328 465-542 (582)
272 3v9f_A Two-component system se 97.3 0.14 4.8E-06 50.0 32.1 271 25-328 211-508 (781)
273 2ad6_A Methanol dehydrogenase 97.3 0.11 3.9E-06 48.8 26.0 51 293-344 442-493 (571)
274 3m0c_C LDL receptor, low-densi 97.3 0.14 4.9E-06 50.0 29.5 228 45-312 404-640 (791)
275 1ijq_A LDL receptor, low-densi 97.2 0.08 2.7E-06 45.6 30.1 231 45-312 10-246 (316)
276 2p4o_A Hypothetical protein; p 97.2 0.083 2.8E-06 45.2 26.1 236 25-292 32-277 (306)
277 3sov_A LRP-6, low-density lipo 97.1 0.11 3.9E-06 44.8 27.8 224 45-311 13-245 (318)
278 3p5b_L Low density lipoprotein 97.1 0.15 5E-06 45.6 29.3 221 88-342 90-317 (400)
279 1w6s_A Methanol dehydrogenase 97.0 0.24 8.4E-06 46.8 24.8 110 35-153 62-194 (599)
280 1n7d_A LDL receptor, low-densi 97.0 0.013 4.4E-07 56.7 14.6 219 88-342 384-611 (699)
281 1n7d_A LDL receptor, low-densi 96.9 0.0068 2.3E-07 58.6 11.9 231 45-312 386-622 (699)
282 3tc9_A Hypothetical hydrolase; 96.9 0.043 1.5E-06 49.7 16.6 154 122-304 139-301 (430)
283 2ism_A Putative oxidoreductase 96.7 0.26 8.7E-06 43.2 20.2 108 26-138 32-153 (352)
284 3m0c_C LDL receptor, low-densi 96.7 0.49 1.7E-05 46.3 28.3 217 89-340 403-627 (791)
285 1w6s_A Methanol dehydrogenase 96.7 0.42 1.4E-05 45.2 24.1 26 287-312 486-511 (599)
286 3tc9_A Hypothetical hydrolase; 96.5 0.079 2.7E-06 47.9 15.4 150 190-342 140-298 (430)
287 3s94_A LRP-6, low-density lipo 96.5 0.63 2.2E-05 44.1 25.7 225 44-311 17-250 (619)
288 3amr_A 3-phytase; beta-propell 96.4 0.43 1.5E-05 41.6 22.0 112 199-311 145-271 (355)
289 1flg_A Protein (quinoprotein e 96.3 0.73 2.5E-05 43.4 26.5 49 294-343 465-514 (582)
290 2xbg_A YCF48-like protein; pho 96.3 0.49 1.7E-05 40.8 23.7 230 24-302 79-320 (327)
291 4a0p_A LRP6, LRP-6, low-densit 96.1 0.98 3.3E-05 42.9 28.1 215 88-341 13-233 (628)
292 2p9w_A MAL S 1 allergenic prot 95.9 0.72 2.4E-05 39.8 22.4 194 123-342 16-262 (334)
293 4hw6_A Hypothetical protein, I 95.8 0.99 3.4E-05 40.7 21.4 153 122-303 141-303 (433)
294 4a0p_A LRP6, LRP-6, low-densit 95.4 1.9 6.5E-05 40.9 30.2 229 37-311 8-244 (628)
295 3s94_A LRP-6, low-density lipo 95.2 2.1 7.2E-05 40.5 23.5 182 88-305 16-203 (619)
296 3kya_A Putative phosphatase; s 95.2 1.3 4.5E-05 40.6 17.3 159 122-303 141-340 (496)
297 2vpj_A Kelch-like protein 12; 95.2 1.2 4.2E-05 37.4 20.1 103 196-305 159-279 (301)
298 2xn4_A Kelch-like protein 2; s 94.8 1.6 5.3E-05 36.8 20.2 103 196-305 155-277 (302)
299 3ii7_A Kelch-like protein 7; p 94.8 1.6 5.6E-05 36.8 21.1 93 207-305 169-273 (306)
300 4hw6_A Hypothetical protein, I 94.2 3.1 0.00011 37.4 26.0 235 67-342 141-430 (433)
301 3kya_A Putative phosphatase; s 94.1 2.8 9.6E-05 38.4 16.6 152 189-341 141-337 (496)
302 3qqz_A Putative uncharacterize 93.8 2.4 8.4E-05 35.0 24.1 195 115-340 22-248 (255)
303 3a9g_A Putative uncharacterize 93.6 3.4 0.00012 36.0 23.0 109 26-138 30-153 (354)
304 3pbp_A Nucleoporin NUP82; beta 93.6 3.9 0.00013 36.6 20.4 140 195-338 30-205 (452)
305 1zgk_A Kelch-like ECH-associat 93.4 3.2 0.00011 35.0 19.4 103 196-305 168-288 (308)
306 2xzh_A Clathrin heavy chain 1; 92.9 4.2 0.00014 35.1 15.5 115 195-316 76-200 (365)
307 2vpj_A Kelch-like protein 12; 92.4 4.3 0.00015 34.0 21.8 103 196-305 112-232 (301)
308 3qqz_A Putative uncharacterize 92.2 4.3 0.00015 33.6 25.4 212 58-301 20-250 (255)
309 2p9w_A MAL S 1 allergenic prot 91.6 6.1 0.00021 34.0 19.5 152 35-217 25-216 (334)
310 2g8s_A Glucose/sorbosone dehyd 91.5 6.5 0.00022 34.1 19.0 51 239-290 289-340 (353)
311 1bpo_A Protein (clathrin); cla 91.5 7.6 0.00026 34.9 15.9 115 195-316 75-199 (494)
312 3sre_A PON1, serum paraoxonase 91.1 7.2 0.00025 34.0 19.6 74 228-303 222-297 (355)
313 3ei3_A DNA damage-binding prot 90.7 16 0.00056 37.3 33.8 72 24-98 553-635 (1158)
314 2uvk_A YJHT; unknown function, 90.6 7.6 0.00026 33.4 17.7 20 34-53 19-39 (357)
315 2xn4_A Kelch-like protein 2; s 90.6 6.8 0.00023 32.7 20.6 104 196-305 108-230 (302)
316 3ii7_A Kelch-like protein 7; p 90.4 7.1 0.00024 32.7 18.5 60 196-258 200-272 (306)
317 1zgk_A Kelch-like ECH-associat 88.0 11 0.00038 31.6 16.3 24 196-219 215-243 (308)
318 3pbp_A Nucleoporin NUP82; beta 87.0 2.7 9.2E-05 37.6 8.6 119 26-146 67-208 (452)
319 2uvk_A YJHT; unknown function, 85.0 17 0.00059 31.0 15.2 48 207-256 168-224 (357)
320 4asc_A Kelch repeat and BTB do 83.6 19 0.00063 30.2 19.2 60 196-258 148-221 (315)
321 3sre_A PON1, serum paraoxonase 83.1 23 0.00077 30.8 22.2 91 43-138 81-183 (355)
322 4asc_A Kelch repeat and BTB do 79.0 27 0.00093 29.2 20.6 104 196-305 98-222 (315)
323 2ism_A Putative oxidoreductase 76.9 35 0.0012 29.3 24.8 70 66-149 32-113 (352)
324 3das_A Putative oxidoreductase 76.6 36 0.0012 29.4 22.4 112 26-139 33-159 (347)
325 1cru_A Protein (soluble quinop 75.8 26 0.00087 31.6 11.1 112 26-139 28-163 (454)
326 1xi4_A Clathrin heavy chain; a 74.8 21 0.00071 37.4 10.8 114 195-315 75-198 (1630)
327 2zwa_A Leucine carboxyl methyl 72.0 70 0.0024 30.5 15.3 109 196-306 451-579 (695)
328 2woz_A Kelch repeat and BTB do 70.5 46 0.0016 27.8 19.1 60 196-258 158-231 (318)
329 2zwa_A Leucine carboxyl methyl 69.7 79 0.0027 30.2 19.0 109 195-305 499-636 (695)
330 2woz_A Kelch repeat and BTB do 67.8 53 0.0018 27.4 20.1 104 196-305 109-232 (318)
331 3ei3_A DNA damage-binding prot 64.4 1.3E+02 0.0045 30.8 30.2 127 208-341 493-632 (1158)
332 3sbq_A Nitrous-oxide reductase 62.3 78 0.0027 29.5 10.9 95 208-304 299-408 (638)
333 2wg3_C Hedgehog-interacting pr 62.0 78 0.0027 28.5 11.1 115 27-141 16-160 (463)
334 2be1_A Serine/threonine-protei 61.7 17 0.00059 31.3 6.4 112 35-152 10-132 (339)
335 4gq2_M Nucleoporin NUP120; bet 60.6 33 0.0011 34.3 9.1 33 27-59 238-272 (950)
336 1xi4_A Clathrin heavy chain; a 56.2 2E+02 0.007 30.3 18.1 92 44-150 85-188 (1630)
337 2be1_A Serine/threonine-protei 55.5 69 0.0023 27.5 9.1 30 196-225 110-139 (339)
338 4fhn_B Nucleoporin NUP120; pro 52.3 24 0.00082 36.1 6.6 30 194-223 246-275 (1139)
339 3f7f_A Nucleoporin NUP120; nuc 50.9 23 0.00079 33.9 5.7 36 187-223 222-257 (729)
340 1bpo_A Protein (clathrin); cla 38.7 2.2E+02 0.0076 25.7 26.7 180 36-258 78-289 (494)
341 1suu_A DNA gyrase subunit A; t 37.2 1.8E+02 0.0063 24.3 21.1 114 82-215 116-230 (312)
342 3f7f_A Nucleoporin NUP120; nuc 37.1 41 0.0014 32.3 5.1 35 274-311 223-257 (729)
343 4fhn_B Nucleoporin NUP120; pro 36.8 25 0.00085 35.9 3.9 35 275-310 240-274 (1139)
344 4gq2_M Nucleoporin NUP120; bet 36.2 3.4E+02 0.011 27.0 20.6 35 189-223 238-273 (950)
345 1tl2_A L10, protein (tachylect 35.4 1.7E+02 0.006 23.5 12.3 101 189-297 43-156 (236)
346 3uc1_A DNA gyrase subunit A; D 28.7 2.7E+02 0.0091 23.6 21.1 130 65-215 95-227 (327)
347 2g8s_A Glucose/sorbosone dehyd 28.2 2.7E+02 0.0094 23.6 27.1 72 265-338 264-347 (353)
348 2xzh_A Clathrin heavy chain 1; 26.5 3.1E+02 0.011 23.6 27.7 180 36-258 79-290 (365)
349 1cru_A Protein (soluble quinop 26.0 3.5E+02 0.012 24.0 21.4 30 120-149 27-56 (454)
350 4gz8_A Semaphorin-3A; multi-do 25.9 3.4E+02 0.012 25.7 9.4 65 80-145 429-495 (667)
351 3oky_B Putative uncharacterize 23.7 2.8E+02 0.0095 25.7 8.1 80 67-146 405-496 (565)
352 3uc1_A DNA gyrase subunit A; D 23.6 3.3E+02 0.011 23.0 19.9 166 119-304 94-279 (327)
353 3sbq_A Nitrous-oxide reductase 22.8 3E+02 0.01 25.8 7.9 92 250-343 299-406 (638)
354 1ukf_A Avirulence protein AVRP 22.0 84 0.0029 24.2 3.6 33 275-307 121-153 (188)
No 1
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=3e-48 Score=355.62 Aligned_cols=282 Identities=24% Similarity=0.425 Sum_probs=246.5
Q ss_pred CCCcCCceeeccCCC-CCEEEEEecCCeEEEEcCC-CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEec
Q 036314 20 PSLHDDWVSAVDGSN-PGFILTGCYDNLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKF 97 (347)
Q Consensus 20 ~~~h~~~v~~~~~~~-~~~l~sg~~d~~i~iw~~~-~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~ 97 (347)
..+|.+.|++++|++ +.+|||||.|++|++||.. +.+.+.+.+|.+.|.+++|+|++ ..|++|+.|++|++||+
T Consensus 104 l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~----~~l~sgs~D~~i~iwd~ 179 (410)
T 1vyh_C 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG----KLLASCSADMTIKLWDF 179 (410)
T ss_dssp EECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTS----SEEEEEETTSCCCEEET
T ss_pred ecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCC----CEEEEEeCCCeEEEEeC
Confidence 347999999999985 5799999999999999974 67788899999999999999854 37999999999999998
Q ss_pred cccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccccc
Q 036314 98 DAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGE 177 (347)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (347)
.+.+ ++..+.+|...|.+++|+|++++|++|+.|++|++||+.++ .
T Consensus 180 ~~~~---------~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~-------------------------~ 225 (410)
T 1vyh_C 180 QGFE---------CIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTG-------------------------Y 225 (410)
T ss_dssp TSSC---------EEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTC-------------------------C
T ss_pred CCCc---------eeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCC-------------------------c
Confidence 7653 45678899999999999999999999999999999998753 3
Q ss_pred ccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeeee-CeeeEEEEeeCCC-----------------
Q 036314 178 AISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFC-GKALNCIDIGGEG----------------- 238 (347)
Q Consensus 178 ~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~-~~~~~~~~~~~~~----------------- 238 (347)
++.++.+|...|.++.+ +++..|++++.|++|++||+++++....+.. ...+.++++.|+.
T Consensus 226 ~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (410)
T 1vyh_C 226 CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSG 305 (410)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-----
T ss_pred EEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccC
Confidence 45677889999999998 5778899999999999999999887766643 4568899997642
Q ss_pred --CcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCC
Q 036314 239 --SALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKD 316 (347)
Q Consensus 239 --~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~ 316 (347)
+.++++|+.|+.|++||++.. ..+..+.+|.++|.+++|+|++. +|++|+.|++|++||+++++.+.++.+|.+
T Consensus 306 ~~g~~l~sgs~D~~i~iwd~~~~---~~~~~~~~h~~~v~~v~~~~~g~-~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~ 381 (410)
T 1vyh_C 306 KPGPFLLSGSRDKTIKMWDVSTG---MCLMTLVGHDNWVRGVLFHSGGK-FILSCADDKTLRVWDYKNKRCMKTLNAHEH 381 (410)
T ss_dssp --CCEEEEEETTSEEEEEETTTT---EEEEEEECCSSCEEEEEECSSSS-CEEEEETTTEEEEECCTTSCCCEEEECCSS
T ss_pred CCCCEEEEEeCCCeEEEEECCCC---ceEEEEECCCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCceEEEEcCCCC
Confidence 458999999999999999753 34678889999999999999986 599999999999999999999999999999
Q ss_pred eEEEEeecC-CCEEEEccCCceEEEeec
Q 036314 317 KVLCADWWR-GDSVISGGVDSKLCVSSG 343 (347)
Q Consensus 317 ~v~~~~~~~-~~~l~s~s~D~~v~vw~~ 343 (347)
.|++++|+| +.+|||||.|++|+||+.
T Consensus 382 ~v~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 382 FVTSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp CEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred cEEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence 999999986 668999999999999974
No 2
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.3e-47 Score=343.09 Aligned_cols=285 Identities=20% Similarity=0.247 Sum_probs=232.3
Q ss_pred CCCcCCceeeccCCC-CCEEEEEecCCeEEEEcCC------------CeEEEEeeccCCceEEEEEeecCCCceEEEEEc
Q 036314 20 PSLHDDWVSAVDGSN-PGFILTGCYDNLGRVWKAG------------GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATA 86 (347)
Q Consensus 20 ~~~h~~~v~~~~~~~-~~~l~sg~~d~~i~iw~~~------------~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~ 86 (347)
+..|...|.+++|++ |.+|++++ |+++|+||.. .........|...|.+++|++++ .|++|
T Consensus 26 ~~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-----~l~~~ 99 (344)
T 4gqb_B 26 PACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-----GILVA 99 (344)
T ss_dssp CSSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-----EEEEE
T ss_pred cccccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-----eEEEE
Confidence 456889999999995 55777666 8888888731 00111233466779999999853 48899
Q ss_pred cCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCC
Q 036314 87 SKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGN 166 (347)
Q Consensus 87 s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~ 166 (347)
+.||+|++||+.+++... .....+.+|.+.|++++|+|+|++|++|+.|++|++||++++
T Consensus 100 s~dg~v~lWd~~~~~~~~-----~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~--------------- 159 (344)
T 4gqb_B 100 SDSGAVELWELDENETLI-----VSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQ--------------- 159 (344)
T ss_dssp ETTSEEEEEEECTTSSCE-----EEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT---------------
T ss_pred ECCCEEEEEeccCCCcee-----EeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCC---------------
Confidence 999999999998765321 122345689999999999999999999999999999998753
Q ss_pred CccccccccccccccccCCccceEEEEeC-CC-CeEEEEecCCcEEEEECCCCceeeeeee---CeeeEEEEeeCCCCcE
Q 036314 167 NQVEEPQLEGEAISTLVGHTQCVSSVVWP-QQ-ETIYSASWDHSVRTWDVEMGKDLSDIFC---GKALNCIDIGGEGSAL 241 (347)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~-~~l~s~s~dg~v~vwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 241 (347)
+.+..+.+|...|.+++|. ++ ..|++++.|++|++||+++++....+.. ...+.++++.+.+..+
T Consensus 160 ----------~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 229 (344)
T 4gqb_B 160 ----------VVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEV 229 (344)
T ss_dssp ----------EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTE
T ss_pred ----------cEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcc
Confidence 3466788999999999984 44 4689999999999999999887776642 2357889998888889
Q ss_pred EEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEE
Q 036314 242 IAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCA 321 (347)
Q Consensus 242 la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~ 321 (347)
+++|+.|++|++||++.. ..+..+.+|.+.|.+++|+|++..+||+|+.|++|+|||+++++ +..+.+|.+.|+++
T Consensus 230 l~sg~~dg~v~~wd~~~~---~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~-~~~~~~H~~~V~~v 305 (344)
T 4gqb_B 230 FVFGDENGTVSLVDTKST---SCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSE-LFRSQAHRDFVRDA 305 (344)
T ss_dssp EEEEETTSEEEEEESCC-----CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCE-EEEECCCSSCEEEE
T ss_pred eEEeccCCcEEEEECCCC---cEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCc-EEEEcCCCCCEEEE
Confidence 999999999999999853 34678899999999999999987779999999999999999876 45678999999999
Q ss_pred eecC-CC-EEEEccCCceEEEeecc
Q 036314 322 DWWR-GD-SVISGGVDSKLCVSSGV 344 (347)
Q Consensus 322 ~~~~-~~-~l~s~s~D~~v~vw~~~ 344 (347)
+|+| +. .|+|||.|++|++|+.+
T Consensus 306 ~~sp~~~~llas~s~D~~v~~w~v~ 330 (344)
T 4gqb_B 306 TWSPLNHSLLTTVGWDHQVVHHVVP 330 (344)
T ss_dssp EECSSSTTEEEEEETTSCEEEEECC
T ss_pred EEeCCCCeEEEEEcCCCeEEEEECC
Confidence 9986 44 57899999999999865
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=9.3e-47 Score=334.62 Aligned_cols=282 Identities=22% Similarity=0.357 Sum_probs=242.7
Q ss_pred CCCcCCceeeccCCC-----CCEEEEEecCCeEEEEcCC-Ce--EEEEeeccCCceEEEEEeecCCCceEEEEEccCCCc
Q 036314 20 PSLHDDWVSAVDGSN-----PGFILTGCYDNLGRVWKAG-GV--CTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQT 91 (347)
Q Consensus 20 ~~~h~~~v~~~~~~~-----~~~l~sg~~d~~i~iw~~~-~~--~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~ 91 (347)
..+|++.|+++++++ +.+|||||.|++||+|+.. +. +...+.+|...|.+++|+++. ..+++++.|++
T Consensus 28 ~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~----~~l~s~s~D~~ 103 (321)
T 3ow8_A 28 EQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTL----PIAASSSLDAH 103 (321)
T ss_dssp TTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSS----SEEEEEETTSE
T ss_pred cccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCC----CEEEEEeCCCc
Confidence 458999999999863 4589999999999999964 32 345789999999999999854 37999999999
Q ss_pred EEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccc
Q 036314 92 LRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEE 171 (347)
Q Consensus 92 v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 171 (347)
|++||+.+++ .+..+..|...+.+++|+|++++|++|+.|++|++|++++..
T Consensus 104 i~lWd~~~~~---------~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~------------------- 155 (321)
T 3ow8_A 104 IRLWDLENGK---------QIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGK------------------- 155 (321)
T ss_dssp EEEEETTTTE---------EEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCS-------------------
T ss_pred EEEEECCCCC---------EEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCc-------------------
Confidence 9999998764 445677888899999999999999999999999999987542
Q ss_pred ccccccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeeee-CeeeEEEEeeCCCCcEEEEecCCC
Q 036314 172 PQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFC-GKALNCIDIGGEGSALIAAGGSDP 249 (347)
Q Consensus 172 ~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~la~~~~d~ 249 (347)
....+..|...+.+++| |++++|++++.|+.|++||+++++.+..+.. ..++.+++|+|+ +.+|++++.|+
T Consensus 156 ------~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd-~~~l~s~s~dg 228 (321)
T 3ow8_A 156 ------KEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPD-SQLLVTASDDG 228 (321)
T ss_dssp ------EEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTT-SCEEEEECTTS
T ss_pred ------eeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCC-CCEEEEEcCCC
Confidence 23355667788999998 6788999999999999999999988777754 347899999765 56889999999
Q ss_pred cEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeecC-CCE
Q 036314 250 ILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDS 328 (347)
Q Consensus 250 ~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~ 328 (347)
.|++||++.. .....+.+|...|.+++|+|++. +|++++.|++|++||+++++++.++.+|.+.|++++|++ +++
T Consensus 229 ~i~iwd~~~~---~~~~~~~~h~~~v~~~~~sp~~~-~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~ 304 (321)
T 3ow8_A 229 YIKIYDVQHA---NLAGTLSGHASWVLNVAFCPDDT-HFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSK 304 (321)
T ss_dssp CEEEEETTTC---CEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSE
T ss_pred eEEEEECCCc---ceeEEEcCCCCceEEEEECCCCC-EEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCE
Confidence 9999999753 34678899999999999999986 599999999999999999999999999999999999985 678
Q ss_pred EEEccCCceEEEeecc
Q 036314 329 VISGGVDSKLCVSSGV 344 (347)
Q Consensus 329 l~s~s~D~~v~vw~~~ 344 (347)
|++++.|++|+||+-+
T Consensus 305 l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 305 IVSVGDDQEIHIYDCP 320 (321)
T ss_dssp EEEEETTCCEEEEECC
T ss_pred EEEEeCCCeEEEEeCC
Confidence 9999999999999865
No 4
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=4e-47 Score=341.87 Aligned_cols=288 Identities=18% Similarity=0.182 Sum_probs=231.2
Q ss_pred CCCCcCCceeeccCC-CCCEEEEEec------CCeEEEEcCC-Ce----EEEEeeccCCceEEEEEeecCCCceEEEEEc
Q 036314 19 EPSLHDDWVSAVDGS-NPGFILTGCY------DNLGRVWKAG-GV----CTHILEGHCGAVSSVNIIKSDGLKYVTVATA 86 (347)
Q Consensus 19 ~~~~h~~~v~~~~~~-~~~~l~sg~~------d~~i~iw~~~-~~----~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~ 86 (347)
.+.+|+..|++++|+ +|.+|||||. |+++++|+.. +. ......+|...|.+++|+|++ .++++
T Consensus 37 ~p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~-----~~l~~ 111 (357)
T 4g56_B 37 APACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEK-----GILVA 111 (357)
T ss_dssp ---CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTT-----EEEEE
T ss_pred CcccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCC-----CEEEE
Confidence 356899999999999 5679999996 7889999863 22 123456789999999999853 36778
Q ss_pred cCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCC
Q 036314 87 SKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGN 166 (347)
Q Consensus 87 s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~ 166 (347)
+.||+|++||+.+++.... ......+|..+|.+++|+|++++|++|+.|++|++||+++.
T Consensus 112 s~dg~v~lWd~~~~~~~~~-----~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~--------------- 171 (357)
T 4g56_B 112 SDSGAVELWEILEKESLLV-----NKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQK--------------- 171 (357)
T ss_dssp ETTSCEEEC--------CC-----CCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTT---------------
T ss_pred ECCCEEEEeeccccceeEE-----EeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCC---------------
Confidence 9999999999987653211 11234589999999999999999999999999999998753
Q ss_pred CccccccccccccccccCCccceEEEEeC-CC-CeEEEEecCCcEEEEECCCCceeeeeee---CeeeEEEEeeCCCCcE
Q 036314 167 NQVEEPQLEGEAISTLVGHTQCVSSVVWP-QQ-ETIYSASWDHSVRTWDVEMGKDLSDIFC---GKALNCIDIGGEGSAL 241 (347)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~-~~l~s~s~dg~v~vwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 241 (347)
+.+..+.+|...|.+++|. ++ ..+++++.|++|++||+++++....+.. ...+.+++++|+++.+
T Consensus 172 ----------~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~ 241 (357)
T 4g56_B 172 ----------AVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDT 241 (357)
T ss_dssp ----------EEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTE
T ss_pred ----------cEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccce
Confidence 3456778899999999984 44 4689999999999999998877655432 3457899998888889
Q ss_pred EEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEE
Q 036314 242 IAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCA 321 (347)
Q Consensus 242 la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~ 321 (347)
|++|+.|+.|++||++.. .....+.+|...|.+++|+|++..+||+|+.|++|+|||+++++.+.. .+|.+.|+++
T Consensus 242 la~g~~d~~i~~wd~~~~---~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~-~~H~~~V~~v 317 (357)
T 4g56_B 242 FACGDETGNVSLVNIKNP---DSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRD-LSHRDFVTGV 317 (357)
T ss_dssp EEEEESSSCEEEEESSCG---GGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEE-CCCSSCEEEE
T ss_pred EEEeecccceeEEECCCC---cEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEE-CCCCCCEEEE
Confidence 999999999999999753 346788999999999999999877899999999999999998876655 4899999999
Q ss_pred eecC--CCEEEEccCCceEEEeeccc
Q 036314 322 DWWR--GDSVISGGVDSKLCVSSGVS 345 (347)
Q Consensus 322 ~~~~--~~~l~s~s~D~~v~vw~~~~ 345 (347)
+|+| +++|||||.|++|++|+.++
T Consensus 318 afsP~d~~~l~s~s~Dg~v~iW~~~~ 343 (357)
T 4g56_B 318 AWSPLDHSKFTTVGWDHKVLHHHLPS 343 (357)
T ss_dssp EECSSSTTEEEEEETTSCEEEEECC-
T ss_pred EEeCCCCCEEEEEcCCCeEEEEECCC
Confidence 9985 67899999999999999763
No 5
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=6.7e-46 Score=326.56 Aligned_cols=282 Identities=22% Similarity=0.298 Sum_probs=238.4
Q ss_pred CCCCcCCceeeccCCC-CCEEEEEecCCeEEEEcCC-CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEe
Q 036314 19 EPSLHDDWVSAVDGSN-PGFILTGCYDNLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWK 96 (347)
Q Consensus 19 ~~~~h~~~v~~~~~~~-~~~l~sg~~d~~i~iw~~~-~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd 96 (347)
...+|.+.|++++|++ +.+|+||+.||+|++||.. +.+++.+.+|...|.+++|++++ ..|++|+.|++|++||
T Consensus 8 ~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~----~~l~s~s~d~~i~vwd 83 (304)
T 2ynn_A 8 TFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARK----NWIIVGSDDFRIRVFN 83 (304)
T ss_dssp EEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGG----TEEEEEETTSEEEEEE
T ss_pred eecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCC----CEEEEECCCCEEEEEE
Confidence 3568999999999984 6699999999999999975 67888999999999999999954 3799999999999999
Q ss_pred ccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccc
Q 036314 97 FDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEG 176 (347)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (347)
+.+++ .+..+.+|...|.+++|+|++++|++|+.|++|++||+++..
T Consensus 84 ~~~~~---------~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~------------------------ 130 (304)
T 2ynn_A 84 YNTGE---------KVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNW------------------------ 130 (304)
T ss_dssp TTTCC---------EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTT------------------------
T ss_pred CCCCc---------EEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCc------------------------
Confidence 98764 456788999999999999999999999999999999986431
Q ss_pred cccccccCCccceEEEEeC--CCCeEEEEecCCcEEEEECCCCceeeeeeeC--eeeEEEEeeC-CCCcEEEEecCCCcE
Q 036314 177 EAISTLVGHTQCVSSVVWP--QQETIYSASWDHSVRTWDVEMGKDLSDIFCG--KALNCIDIGG-EGSALIAAGGSDPIL 251 (347)
Q Consensus 177 ~~~~~~~~h~~~v~~~~~~--~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~la~~~~d~~i 251 (347)
.....+.+|...|.+++|. ++..|++++.|++|++||++.+.....+..+ ..+..+++.+ +++.++++|+.|++|
T Consensus 131 ~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i 210 (304)
T 2ynn_A 131 ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTI 210 (304)
T ss_dssp EEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEE
T ss_pred chhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeE
Confidence 1234678899999999994 4578999999999999999887665555432 4577788765 356689999999999
Q ss_pred EEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeecC-CC--E
Q 036314 252 RIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GD--S 328 (347)
Q Consensus 252 ~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~-~~--~ 328 (347)
++||++.. ..+..+.+|...|.+++|+|++. +|++|+.|++|++||+++++.++++..|.+.+++++|+| +. +
T Consensus 211 ~iWd~~~~---~~~~~~~~h~~~v~~~~~~p~~~-~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (304)
T 2ynn_A 211 KIWDYQTK---SCVATLEGHMSNVSFAVFHPTLP-IIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNY 286 (304)
T ss_dssp EEEETTTT---EEEEEEECCSSCEEEEEECSSSS-EEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGC
T ss_pred EEEeCCCC---ccceeeCCCCCCEEEEEECCCCC-EEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceE
Confidence 99999753 35778899999999999999986 699999999999999999999999999999999999865 43 4
Q ss_pred EEEccCCceEEEee
Q 036314 329 VISGGVDSKLCVSS 342 (347)
Q Consensus 329 l~s~s~D~~v~vw~ 342 (347)
+|+|+.||.+ +|+
T Consensus 287 ~asg~~~g~~-~~~ 299 (304)
T 2ynn_A 287 IASGFDNGFT-VLS 299 (304)
T ss_dssp EEEEETTEEE-EEE
T ss_pred EEEecCCceE-EEE
Confidence 7887766655 444
No 6
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2.8e-45 Score=327.65 Aligned_cols=283 Identities=21% Similarity=0.276 Sum_probs=240.2
Q ss_pred CCCcCCceeeccCC-CCCEEEEEecCCeEEEEcC-CCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEec
Q 036314 20 PSLHDDWVSAVDGS-NPGFILTGCYDNLGRVWKA-GGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKF 97 (347)
Q Consensus 20 ~~~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~-~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~ 97 (347)
..+|.+.|++++|+ ++.+|+|||.|++|++||. .+..+..+..|...|.+++|+|++ ..|++++.|++|++|++
T Consensus 51 l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~----~~l~s~~~d~~v~iw~~ 126 (340)
T 1got_B 51 LRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSG----NYVACGGLDNICSIYNL 126 (340)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTS----SEEEEEETTCEEEEEET
T ss_pred ecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCC----CEEEEEeCCCeEEEEEC
Confidence 56899999999998 5679999999999999996 467888899999999999999954 37999999999999998
Q ss_pred cccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccccc
Q 036314 98 DAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGE 177 (347)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (347)
...+ ...+....+.+|...|.++.|++++. +++++.|++|++||+.+. .
T Consensus 127 ~~~~-----~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~-------------------------~ 175 (340)
T 1got_B 127 KTRE-----GNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETG-------------------------Q 175 (340)
T ss_dssp TTCS-----BSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTT-------------------------E
T ss_pred ccCC-----CcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCC-------------------------c
Confidence 7542 12234556889999999999998875 889999999999998753 3
Q ss_pred ccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeeee-CeeeEEEEeeCCCCcEEEEecCCCcEEEEe
Q 036314 178 AISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFC-GKALNCIDIGGEGSALIAAGGSDPILRIWD 255 (347)
Q Consensus 178 ~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~la~~~~d~~i~iwd 255 (347)
.+..+.+|...|.++.| |++..+++++.|++|++||++++.....+.. ...+.+++++|+ +..|++|+.|++|++||
T Consensus 176 ~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~-~~~l~s~s~d~~v~iwd 254 (340)
T 1got_B 176 QTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPN-GNAFATGSDDATCRLFD 254 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTT-SSEEEEEETTSCEEEEE
T ss_pred EEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCC-CCEEEEEcCCCcEEEEE
Confidence 35567889999999998 5677899999999999999999887776653 457899999765 56889999999999999
Q ss_pred CCCCCCCCCeEEec--CCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeecC-CCEEEEc
Q 036314 256 PRKPGTSAPVFQFS--SHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISG 332 (347)
Q Consensus 256 ~~~~~~~~~~~~~~--~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~ 332 (347)
++... .+..+. .+...|.+++|+|++. +|++|+.|+.|++||+.+++.+..+.+|.+.|.+++|+| |.+||||
T Consensus 255 ~~~~~---~~~~~~~~~~~~~v~~~~~s~~g~-~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~ 330 (340)
T 1got_B 255 LRADQ---ELMTYSHDNIICGITSVSFSKSGR-LLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATG 330 (340)
T ss_dssp TTTTE---EEEEECCTTCCSCEEEEEECTTSS-EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEE
T ss_pred CCCCc---EEEEEccCCcccceEEEEECCCCC-EEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEE
Confidence 97532 233333 3345799999999986 699999999999999999988999999999999999985 6789999
Q ss_pred cCCceEEEee
Q 036314 333 GVDSKLCVSS 342 (347)
Q Consensus 333 s~D~~v~vw~ 342 (347)
|.|++|+||+
T Consensus 331 s~D~~i~iWd 340 (340)
T 1got_B 331 SWDSFLKIWN 340 (340)
T ss_dssp ETTSCEEEEC
T ss_pred cCCccEEecC
Confidence 9999999996
No 7
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.9e-44 Score=324.05 Aligned_cols=286 Identities=19% Similarity=0.220 Sum_probs=240.6
Q ss_pred CCCcCCceeeccCC-CCCEEEEEecCCeEEEEcC-CCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEec
Q 036314 20 PSLHDDWVSAVDGS-NPGFILTGCYDNLGRVWKA-GGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKF 97 (347)
Q Consensus 20 ~~~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~-~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~ 97 (347)
..+|.+.|++++|+ ++.+|||||.|++|++||. .+...+.+..|...|.+++|+|++ ..|++++.|+++++|++
T Consensus 60 l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g----~~lasg~~d~~i~v~~~ 135 (354)
T 2pbi_B 60 LKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSG----CAIACGGLDNKCSVYPL 135 (354)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTS----SEEEEESTTSEEEEEEC
T ss_pred ecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCC----CEEEEeeCCCCEEEEEE
Confidence 56899999999998 4679999999999999996 467778889999999999999954 37999999999999998
Q ss_pred cccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccccc
Q 036314 98 DAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGE 177 (347)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (347)
...... ........+.+|...|.+++|++++..|++++.|++|++||++++ +
T Consensus 136 ~~~~~~---~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~-------------------------~ 187 (354)
T 2pbi_B 136 TFDKNE---NMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESG-------------------------Q 187 (354)
T ss_dssp CCCTTC---CSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTC-------------------------C
T ss_pred eccccc---cccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCC-------------------------e
Confidence 643211 112234567789999999999999999999999999999998753 3
Q ss_pred ccccccCCccceEEEEeC---CCCeEEEEecCCcEEEEECCCCceeeeeee-CeeeEEEEeeCCCCcEEEEecCCCcEEE
Q 036314 178 AISTLVGHTQCVSSVVWP---QQETIYSASWDHSVRTWDVEMGKDLSDIFC-GKALNCIDIGGEGSALIAAGGSDPILRI 253 (347)
Q Consensus 178 ~~~~~~~h~~~v~~~~~~---~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~la~~~~d~~i~i 253 (347)
.+..+.+|...|.++.+. ++..|++++.|++|++||+++++.+..+.. ...+.+++++|+ +..|++++.|++|++
T Consensus 188 ~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~-~~~l~s~s~D~~v~l 266 (354)
T 2pbi_B 188 LLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPS-GDAFASGSDDATCRL 266 (354)
T ss_dssp EEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTT-SSEEEEEETTSCEEE
T ss_pred EEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCC-CCEEEEEeCCCeEEE
Confidence 456778899999999873 357899999999999999999988777653 457899999765 468899999999999
Q ss_pred EeCCCCCCCCCeEEecC--CCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeecC-CCEEE
Q 036314 254 WDPRKPGTSAPVFQFSS--HNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVI 330 (347)
Q Consensus 254 wd~~~~~~~~~~~~~~~--h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~ 330 (347)
||++... ....+.. +...+.+++|+|++. +|++|+.|++|++||+++++.+..+.+|.+.|.+++|+| |++||
T Consensus 267 wd~~~~~---~~~~~~~~~~~~~~~~~~~s~~g~-~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~ 342 (354)
T 2pbi_B 267 YDLRADR---EVAIYSKESIIFGASSVDFSLSGR-LLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFC 342 (354)
T ss_dssp EETTTTE---EEEEECCTTCCSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEE
T ss_pred EECCCCc---EEEEEcCCCcccceeEEEEeCCCC-EEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEE
Confidence 9997532 2333333 334689999999986 699999999999999999998999999999999999985 77899
Q ss_pred EccCCceEEEee
Q 036314 331 SGGVDSKLCVSS 342 (347)
Q Consensus 331 s~s~D~~v~vw~ 342 (347)
+||.|++|+||+
T Consensus 343 sgs~D~~v~vW~ 354 (354)
T 2pbi_B 343 SGSWDHTLRVWA 354 (354)
T ss_dssp EEETTSEEEEEC
T ss_pred EEcCCCCEEecC
Confidence 999999999996
No 8
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-44 Score=320.68 Aligned_cols=295 Identities=21% Similarity=0.290 Sum_probs=225.1
Q ss_pred CCCcCCceeeccCCCCCEEEEEecCCeEEEEcCCC---eEEEEe-ec-cCCceEEEEEeecCCCceEEEEEccCCCcEEE
Q 036314 20 PSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAGG---VCTHIL-EG-HCGAVSSVNIIKSDGLKYVTVATASKDQTLRL 94 (347)
Q Consensus 20 ~~~h~~~v~~~~~~~~~~l~sg~~d~~i~iw~~~~---~~~~~l-~~-h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~ 94 (347)
..+|++.|++++++++ +|||||.|++|++|+... .....+ .+ |.+.|.+++|+|++ ..|++++.|++|++
T Consensus 10 ~~~h~~~v~~~~~s~~-~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~----~~las~s~D~~v~i 84 (330)
T 2hes_X 10 LKLYKEKIWSFDFSQG-ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHT----SLLAAGSFDSTVSI 84 (330)
T ss_dssp EECCSSCEEEEEEETT-EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTS----SEEEEEETTSCEEE
T ss_pred eccCCCceeeeccCCC-EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCC----CEEEEEeCCCcEEE
Confidence 4589999999999865 999999999999999753 455556 44 99999999999954 37999999999999
Q ss_pred EeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccc
Q 036314 95 WKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQL 174 (347)
Q Consensus 95 wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (347)
|++..... .....+....+.+|..+|.+++|+|++++|++|+.|++|++||+.....
T Consensus 85 w~~~~~~~--~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~--------------------- 141 (330)
T 2hes_X 85 WAKEESAD--RTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGE--------------------- 141 (330)
T ss_dssp EEC---------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCC---------------------
T ss_pred EEcccCcC--ccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCC---------------------
Confidence 99854210 0012235567889999999999999999999999999999999853210
Q ss_pred cccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCC--ceeeeeee-CeeeEEEEeeCCC-CcEEEEecCCC
Q 036314 175 EGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMG--KDLSDIFC-GKALNCIDIGGEG-SALIAAGGSDP 249 (347)
Q Consensus 175 ~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~--~~~~~~~~-~~~~~~~~~~~~~-~~~la~~~~d~ 249 (347)
..+++..+.+|...|.++.| |++.+|++++.|++|++||.+.+ +++..+.. ...+.+++|+++. ...+++++.|+
T Consensus 142 ~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~ 221 (330)
T 2hes_X 142 EYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDS 221 (330)
T ss_dssp CCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTS
T ss_pred CeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCC
Confidence 01234567889999999998 57789999999999999998766 34444443 3478899998753 45789999999
Q ss_pred cEEEEeCCCCCCC-----CCeEEecC-CCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCc--cce-eecCCCC-eEE
Q 036314 250 ILRIWDPRKPGTS-----APVFQFSS-HNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAW--PLS-VIDSHKD-KVL 319 (347)
Q Consensus 250 ~i~iwd~~~~~~~-----~~~~~~~~-h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~--~~~-~~~~h~~-~v~ 319 (347)
+|++||++..... .....+.+ |...|.+++|++++ +|++++.|++|+|||.++++ ... .+.+|.. .|.
T Consensus 222 ~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~--~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~ 299 (330)
T 2hes_X 222 TVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG--LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEIN 299 (330)
T ss_dssp CEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS--CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEE
T ss_pred eEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC--EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEE
Confidence 9999998642111 12234444 89999999999765 59999999999999998763 232 3367887 899
Q ss_pred EEeecC---CCEEEEccCCceEEEeecc
Q 036314 320 CADWWR---GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 320 ~~~~~~---~~~l~s~s~D~~v~vw~~~ 344 (347)
+++|+| +++|||||.|++|+||+..
T Consensus 300 ~v~~~~~~~~~~las~s~Dg~v~~W~~~ 327 (330)
T 2hes_X 300 VVKWLELNGKTILATGGDDGIVNFWSLE 327 (330)
T ss_dssp EEEEC-----CCEEEEETTSEEEEEEC-
T ss_pred EEEEecCCCceEEEEecCCCcEEEEEec
Confidence 999986 5689999999999999854
No 9
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=7.4e-44 Score=319.11 Aligned_cols=291 Identities=24% Similarity=0.363 Sum_probs=231.7
Q ss_pred CCCcCC-ceeeccCC-CCCEEEEEecCCeEEEEcCCC-e--EEE-EeeccCCceEEEEEeecCCCceEEEEEccCCCcEE
Q 036314 20 PSLHDD-WVSAVDGS-NPGFILTGCYDNLGRVWKAGG-V--CTH-ILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLR 93 (347)
Q Consensus 20 ~~~h~~-~v~~~~~~-~~~~l~sg~~d~~i~iw~~~~-~--~~~-~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~ 93 (347)
..+|.+ .|++++|+ ++.+|||||.|++|+|||..+ . +.. ...+|.+.|.+++|+|++ .+|++|+.|++|+
T Consensus 11 ~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g----~~l~s~s~D~~v~ 86 (345)
T 3fm0_A 11 VPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCG----NYLASASFDATTC 86 (345)
T ss_dssp ECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTS----SEEEEEETTSCEE
T ss_pred ecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCC----CEEEEEECCCcEE
Confidence 347887 99999998 567999999999999999753 3 222 346899999999999954 3799999999999
Q ss_pred EEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccc
Q 036314 94 LWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQ 173 (347)
Q Consensus 94 ~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (347)
+|++..++ .++...+.+|..+|.+++|+|++++|++|+.|++|++||+.....
T Consensus 87 iw~~~~~~-------~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~-------------------- 139 (345)
T 3fm0_A 87 IWKKNQDD-------FECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDE-------------------- 139 (345)
T ss_dssp EEEECCC--------EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSC--------------------
T ss_pred EEEccCCC-------eEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCC--------------------
Confidence 99987543 234567889999999999999999999999999999999875321
Q ss_pred ccccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCcee--eeee-eCeeeEEEEeeCCCCcEEEEecCCC
Q 036314 174 LEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDL--SDIF-CGKALNCIDIGGEGSALIAAGGSDP 249 (347)
Q Consensus 174 ~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~la~~~~d~ 249 (347)
..++..+.+|...|.+++| |++++|++++.|++|++||++.+... ..+. +...+.+++|+|+ +.+|++++.|+
T Consensus 140 --~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~-g~~l~s~s~D~ 216 (345)
T 3fm0_A 140 --YECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPS-GQRLASCSDDR 216 (345)
T ss_dssp --EEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTT-SSEEEEEETTS
T ss_pred --eEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCC-CCEEEEEeCCC
Confidence 1234567789999999998 57788999999999999999876533 3333 2357899999765 56889999999
Q ss_pred cEEEEeCCCCCCCC------------CeEEecC-CCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCcc----c----
Q 036314 250 ILRIWDPRKPGTSA------------PVFQFSS-HNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWP----L---- 308 (347)
Q Consensus 250 ~i~iwd~~~~~~~~------------~~~~~~~-h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~----~---- 308 (347)
+|++||...+.... .+..+.+ |...|.+++|+|++. .|++++.|+.|++|+.+.+.. .
T Consensus 217 ~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~ 295 (345)
T 3fm0_A 217 TVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTG-ALATACGDDAIRVFQEDPNSDPQQPTFSLT 295 (345)
T ss_dssp CEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTC-CEEEEETTSCEEEEEECTTSCTTSCCEEEE
T ss_pred eEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCC-EEEEEeCCCeEEEEEeCCCCCcceeeEEEE
Confidence 99999964322111 1223444 888999999999986 599999999999999876431 1
Q ss_pred -eeecCCCCeEEEEeecC-C-CEEEEccCCceEEEeeccc
Q 036314 309 -SVIDSHKDKVLCADWWR-G-DSVISGGVDSKLCVSSGVS 345 (347)
Q Consensus 309 -~~~~~h~~~v~~~~~~~-~-~~l~s~s~D~~v~vw~~~~ 345 (347)
..+.+|.+.|.+++|+| + ..|||||.||+|+||+...
T Consensus 296 ~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~ 335 (345)
T 3fm0_A 296 AHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQR 335 (345)
T ss_dssp EEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC
T ss_pred eeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecC
Confidence 22368999999999987 3 4899999999999999753
No 10
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.1e-42 Score=311.07 Aligned_cols=283 Identities=23% Similarity=0.353 Sum_probs=223.4
Q ss_pred CCCCcCCceeeccC-----C--CCCEEEEEecCCeEEEEcCC--------CeEEEEeeccCCceEEEEEeecCCCceEEE
Q 036314 19 EPSLHDDWVSAVDG-----S--NPGFILTGCYDNLGRVWKAG--------GVCTHILEGHCGAVSSVNIIKSDGLKYVTV 83 (347)
Q Consensus 19 ~~~~h~~~v~~~~~-----~--~~~~l~sg~~d~~i~iw~~~--------~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l 83 (347)
...+|++.|+++++ + ++.+|||||.|++|++||.. +.....+.+|...|.+++|+|++ .+|
T Consensus 16 ~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~----~~l 91 (343)
T 2xzm_R 16 ILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQEN----CFA 91 (343)
T ss_dssp EEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSST----TEE
T ss_pred eeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCC----CEE
Confidence 35689999999987 4 45699999999999999963 24567899999999999999854 368
Q ss_pred EEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeec
Q 036314 84 ATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKR 163 (347)
Q Consensus 84 ~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~ 163 (347)
++++.|++|++||+.+++ .+..+.+|..+|.+++|+|++++|++++.|++|++||+.....
T Consensus 92 ~s~s~D~~v~lwd~~~~~---------~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~---------- 152 (343)
T 2xzm_R 92 ISSSWDKTLRLWDLRTGT---------TYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECK---------- 152 (343)
T ss_dssp EEEETTSEEEEEETTSSC---------EEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEE----------
T ss_pred EEEcCCCcEEEEECCCCc---------EEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCce----------
Confidence 999999999999997654 4567889999999999999999999999999999999863100
Q ss_pred cCCCccccccccccccccccCCccceEEEEeC-CC----------CeEEEEecCCcEEEEECCCCceeeeee-eCeeeEE
Q 036314 164 KGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP-QQ----------ETIYSASWDHSVRTWDVEMGKDLSDIF-CGKALNC 231 (347)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~----------~~l~s~s~dg~v~vwd~~~~~~~~~~~-~~~~~~~ 231 (347)
.......+|...|.++.|. ++ .+|++++.|++|++||.. ......+. +...+.+
T Consensus 153 -------------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~-~~~~~~~~~h~~~v~~ 218 (343)
T 2xzm_R 153 -------------FSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN-FQIRYTFKAHESNVNH 218 (343)
T ss_dssp -------------EECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT-TEEEEEEECCSSCEEE
T ss_pred -------------eeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC-CceeEEEcCccccceE
Confidence 0011234688889999884 33 589999999999999943 44444443 3457899
Q ss_pred EEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccce--
Q 036314 232 IDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLS-- 309 (347)
Q Consensus 232 ~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~-- 309 (347)
++++|+ +.+|++|+.|+.|++||++.... +...+ .+...|.+++|+|++. +| +++.|+.|++||+.+++...
T Consensus 219 ~~~s~~-g~~l~sgs~dg~v~iwd~~~~~~--~~~~~-~~~~~v~~v~~sp~~~-~l-a~~~d~~v~iw~~~~~~~~~~~ 292 (343)
T 2xzm_R 219 LSISPN-GKYIATGGKDKKLLIWDILNLTY--PQREF-DAGSTINQIAFNPKLQ-WV-AVGTDQGVKIFNLMTQSKAPVC 292 (343)
T ss_dssp EEECTT-SSEEEEEETTCEEEEEESSCCSS--CSEEE-ECSSCEEEEEECSSSC-EE-EEEESSCEEEEESSSCCSCSEE
T ss_pred EEECCC-CCEEEEEcCCCeEEEEECCCCcc--cceee-cCCCcEEEEEECCCCC-EE-EEECCCCEEEEEeCCCCCCceE
Confidence 999765 56889999999999999854322 23333 3556799999999974 34 45668889999998765443
Q ss_pred eec-----------CCCCeEEEEeecC-CCEEEEccCCceEEEeecc
Q 036314 310 VID-----------SHKDKVLCADWWR-GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 310 ~~~-----------~h~~~v~~~~~~~-~~~l~s~s~D~~v~vw~~~ 344 (347)
.+. +|...|.+++|+| |++|++|+.||+|++|+..
T Consensus 293 ~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~ 339 (343)
T 2xzm_R 293 TIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFE 339 (343)
T ss_dssp ECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEE
T ss_pred EeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEE
Confidence 333 7888999999986 7789999999999999853
No 11
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.1e-42 Score=306.80 Aligned_cols=282 Identities=24% Similarity=0.390 Sum_probs=237.2
Q ss_pred CCCcCCceeeccCC-CCCEEEEEecCCeEEEEcC-CCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEec
Q 036314 20 PSLHDDWVSAVDGS-NPGFILTGCYDNLGRVWKA-GGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKF 97 (347)
Q Consensus 20 ~~~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~-~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~ 97 (347)
..+|.+.|++++++ ++.+|++|+.|++|++|+. .+.....+.+|...|.+++|+|++ ..|++++.|++|++||+
T Consensus 19 ~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~----~~l~s~~~d~~i~vwd~ 94 (312)
T 4ery_A 19 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS----NLLVSASDDKTLKIWDV 94 (312)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTS----SEEEEEETTSEEEEEET
T ss_pred EcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCC----CEEEEECCCCEEEEEEC
Confidence 45899999999998 4679999999999999997 467888899999999999999854 37999999999999999
Q ss_pred cccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccccc
Q 036314 98 DAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGE 177 (347)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (347)
.+++ .+..+.+|...|.+++|+|+++++++|+.|++|++||+.+. +
T Consensus 95 ~~~~---------~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~-------------------------~ 140 (312)
T 4ery_A 95 SSGK---------CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG-------------------------K 140 (312)
T ss_dssp TTCC---------EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTC-------------------------C
T ss_pred CCCc---------EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCC-------------------------E
Confidence 7654 45678899999999999999999999999999999998753 2
Q ss_pred ccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeeee--CeeeEEEEeeCCCCcEEEEecCCCcEEEE
Q 036314 178 AISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFC--GKALNCIDIGGEGSALIAAGGSDPILRIW 254 (347)
Q Consensus 178 ~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~la~~~~d~~i~iw 254 (347)
.+..+..|...|.++.| ++++.|++++.|+.|++||+++++.+..+.. ...+.+++++++ +..+++++.|+.|++|
T Consensus 141 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~d~~i~iw 219 (312)
T 4ery_A 141 CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN-GKYILAATLDNTLKLW 219 (312)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTT-SSEEEEEETTTEEEEE
T ss_pred EEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCC-CCEEEEEcCCCeEEEE
Confidence 34566788899999998 5778899999999999999999887766543 335788888765 4678899999999999
Q ss_pred eCCCCCCCCCeEEecCCCCCee--EEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeecC-CCEEEE
Q 036314 255 DPRKPGTSAPVFQFSSHNSWIS--ACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVIS 331 (347)
Q Consensus 255 d~~~~~~~~~~~~~~~h~~~v~--~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s 331 (347)
|++.. .....+.+|...+. ...+++.+..+|++|+.|+.|++||+++++.+..+.+|.+.|.+++|+| +..|++
T Consensus 220 d~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s 296 (312)
T 4ery_A 220 DYSKG---KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIAS 296 (312)
T ss_dssp ETTTT---EEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEE
T ss_pred ECCCC---cEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEE
Confidence 99753 34667777876532 2345544446799999999999999999998999999999999999986 667888
Q ss_pred cc--CCceEEEeec
Q 036314 332 GG--VDSKLCVSSG 343 (347)
Q Consensus 332 ~s--~D~~v~vw~~ 343 (347)
++ .|++|++|..
T Consensus 297 ~~~~~d~~i~~W~~ 310 (312)
T 4ery_A 297 AALENDKTIKLWKS 310 (312)
T ss_dssp EECTTTCCEEEEEC
T ss_pred EEccCCccEEEecC
Confidence 86 6999999974
No 12
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=9.1e-43 Score=308.66 Aligned_cols=279 Identities=24% Similarity=0.435 Sum_probs=229.4
Q ss_pred CCCcCCceeeccCCC--CCEEEEEecCCeEEEEcCC------CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCc
Q 036314 20 PSLHDDWVSAVDGSN--PGFILTGCYDNLGRVWKAG------GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQT 91 (347)
Q Consensus 20 ~~~h~~~v~~~~~~~--~~~l~sg~~d~~i~iw~~~------~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~ 91 (347)
..+|++.|+++++++ +++|+|||.|++|++|+.. +..++.+.+|...|.+++|++++ .+|++++.|++
T Consensus 13 l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg----~~l~s~s~D~~ 88 (319)
T 3frx_A 13 LEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADG----AYALSASWDKT 88 (319)
T ss_dssp ECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTS----SEEEEEETTSE
T ss_pred EccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCC----CEEEEEeCCCE
Confidence 569999999999874 3699999999999999863 23567899999999999999854 47999999999
Q ss_pred EEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccc
Q 036314 92 LRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEE 171 (347)
Q Consensus 92 v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 171 (347)
||+||+.+++ .+..+.+|..+|.+++|+|++++|++|+.|++|++||+..
T Consensus 89 v~~wd~~~~~---------~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~--------------------- 138 (319)
T 3frx_A 89 LRLWDVATGE---------TYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKG--------------------- 138 (319)
T ss_dssp EEEEETTTTE---------EEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTS---------------------
T ss_pred EEEEECCCCC---------eeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC---------------------
Confidence 9999998764 4567889999999999999999999999999999999853
Q ss_pred ccccccccccccCCccceEEEEeCC-------CCeEEEEecCCcEEEEECCCCceeeeeee-CeeeEEEEeeCCCCcEEE
Q 036314 172 PQLEGEAISTLVGHTQCVSSVVWPQ-------QETIYSASWDHSVRTWDVEMGKDLSDIFC-GKALNCIDIGGEGSALIA 243 (347)
Q Consensus 172 ~~~~~~~~~~~~~h~~~v~~~~~~~-------~~~l~s~s~dg~v~vwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~la 243 (347)
.++..+.+|...|.++.+.+ +..+++++.|++|++||+++.+....+.. ...+.+++++|+ +.+|+
T Consensus 139 -----~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~-g~~l~ 212 (319)
T 3frx_A 139 -----QCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPD-GTLIA 212 (319)
T ss_dssp -----CEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTT-SSEEE
T ss_pred -----CeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCC-CCEEE
Confidence 23456778999999998732 34799999999999999998876665543 457899999765 56889
Q ss_pred EecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceee--------cCCC
Q 036314 244 AGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVI--------DSHK 315 (347)
Q Consensus 244 ~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~--------~~h~ 315 (347)
+++.|+.|++||++.. ..+..+.. .+.|.+++|+|++. +|++++. ..+++|+++.+..+..+ ..|.
T Consensus 213 s~~~dg~i~iwd~~~~---~~~~~~~~-~~~v~~~~~sp~~~-~la~~~~-~~i~v~~~~~~~~~~~~~~~~~~~~~~~~ 286 (319)
T 3frx_A 213 SAGKDGEIMLWNLAAK---KAMYTLSA-QDEVFSLAFSPNRY-WLAAATA-TGIKVFSLDPQYLVDDLRPEFAGYSKAAE 286 (319)
T ss_dssp EEETTCEEEEEETTTT---EEEEEEEC-CSCEEEEEECSSSS-EEEEEET-TEEEEEEETTEEEEEEECCCCTTCCGGGC
T ss_pred EEeCCCeEEEEECCCC---cEEEEecC-CCcEEEEEEcCCCC-EEEEEcC-CCcEEEEeCcCeeeeccCccccccccCcC
Confidence 9999999999999753 33556654 46799999999985 4776664 55999999876544443 2456
Q ss_pred CeEEEEeecC-CCEEEEccCCceEEEeecc
Q 036314 316 DKVLCADWWR-GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 316 ~~v~~~~~~~-~~~l~s~s~D~~v~vw~~~ 344 (347)
..+.+++|+| |++|++|+.|++|+||+..
T Consensus 287 ~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~ 316 (319)
T 3frx_A 287 PHAVSLAWSADGQTLFAGYTDNVIRVWQVM 316 (319)
T ss_dssp CCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred cceeEEEECCCCCEEEEeecCceEEEEEEe
Confidence 7899999985 7789999999999999864
No 13
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.7e-43 Score=320.91 Aligned_cols=294 Identities=19% Similarity=0.277 Sum_probs=234.6
Q ss_pred CCCcCCceeeccCC-CCCEEEEEecCCeEEEEcC-CCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEec
Q 036314 20 PSLHDDWVSAVDGS-NPGFILTGCYDNLGRVWKA-GGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKF 97 (347)
Q Consensus 20 ~~~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~-~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~ 97 (347)
..+|.+.|++++|+ ++.+|||||.|++|++||. .+.+...+.+|...|.+++|+|++ ..|++|+.|+++++|++
T Consensus 62 l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g----~~las~~~d~~v~iw~~ 137 (380)
T 3iz6_a 62 LQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNG----QSVACGGLDSACSIFNL 137 (380)
T ss_dssp ECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTS----SEEEECCSSSCCEEEEC
T ss_pred ccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCC----CEEEEeeCCCcEEEEEC
Confidence 56899999999998 4669999999999999997 477888999999999999999854 47999999999999998
Q ss_pred cccccccCccccceeeeeeccccceEEEEEeCCC-CEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccc
Q 036314 98 DAEELVNHPKKIRSFKILRGHKASVHSIAAETSG-NMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEG 176 (347)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~-~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (347)
...... .........+.+|.+.|.+++|.|++ ..|++|+.|++|++||+.++..... .
T Consensus 138 ~~~~~~--~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~----~--------------- 196 (380)
T 3iz6_a 138 SSQADR--DGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISI----F--------------- 196 (380)
T ss_dssp CCCSSC--CCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEE----E---------------
T ss_pred CCCccc--cCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEE----e---------------
Confidence 753211 11122345678999999999999874 5799999999999999876432100 0
Q ss_pred cccccccCCccceEEEEeC--CCCeEEEEecCCcEEEEECCC-Cceeeeee-eCeeeEEEEeeCCCCcEEEEecCCCcEE
Q 036314 177 EAISTLVGHTQCVSSVVWP--QQETIYSASWDHSVRTWDVEM-GKDLSDIF-CGKALNCIDIGGEGSALIAAGGSDPILR 252 (347)
Q Consensus 177 ~~~~~~~~h~~~v~~~~~~--~~~~l~s~s~dg~v~vwd~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~la~~~~d~~i~ 252 (347)
......+|...|.++.|. ++..|++++.|++|++||++. +..+..+. +...+.+++|+|+ +..|++|+.|++|+
T Consensus 197 -~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~-~~~l~s~s~D~~i~ 274 (380)
T 3iz6_a 197 -GSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPD-GQRFGTGSDDGTCR 274 (380)
T ss_dssp -CCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTT-SSEEEEECSSSCEE
T ss_pred -ecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecC-CCeEEEEcCCCeEE
Confidence 001125788999999883 677899999999999999984 34455554 3457899999765 56889999999999
Q ss_pred EEeCCCCCCCCCeEEecCC-------CCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceee----cCCCCeEEEE
Q 036314 253 IWDPRKPGTSAPVFQFSSH-------NSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVI----DSHKDKVLCA 321 (347)
Q Consensus 253 iwd~~~~~~~~~~~~~~~h-------~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~----~~h~~~v~~~ 321 (347)
+||++... .+..+..+ ...|.+++|+|++. +|++|+.||.|++||+..++.+..+ .+|.+.|.++
T Consensus 275 lwd~~~~~---~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l 350 (380)
T 3iz6_a 275 LFDMRTGH---QLQVYNREPDRNDNELPIVTSVAFSISGR-LLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCL 350 (380)
T ss_dssp EEETTTTE---EEEEECCCCSSSCCSSCSCSEEEECSSSS-EEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEE
T ss_pred EEECCCCc---EEEEecccccccccccCceEEEEECCCCC-EEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEE
Confidence 99998532 23344333 23589999999986 5999999999999999988777665 6899999999
Q ss_pred eecC-CCEEEEccCCceEEEeecc
Q 036314 322 DWWR-GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 322 ~~~~-~~~l~s~s~D~~v~vw~~~ 344 (347)
+|+| |.+|+|||.|++|+||+..
T Consensus 351 ~~s~dg~~l~sgs~D~~i~iW~~~ 374 (380)
T 3iz6_a 351 GLSSDGSALCTGSWDKNLKIWAFS 374 (380)
T ss_dssp EECSSSSEEEEECTTSCEEEEECC
T ss_pred EECCCCCEEEEeeCCCCEEEEecC
Confidence 9985 7789999999999999864
No 14
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.1e-42 Score=334.54 Aligned_cols=317 Identities=15% Similarity=0.261 Sum_probs=235.0
Q ss_pred CCCcCCceeeccCC-CCCEEEEEecCCeEEEEcC-CCeEEEEee-------ccCCceEEEEEeecCCCceEEEEEccCCC
Q 036314 20 PSLHDDWVSAVDGS-NPGFILTGCYDNLGRVWKA-GGVCTHILE-------GHCGAVSSVNIIKSDGLKYVTVATASKDQ 90 (347)
Q Consensus 20 ~~~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~-~~~~~~~l~-------~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg 90 (347)
..+|.+.|++++|+ ++.+|||||.|++|++||. .+.+...+. +|.+.|.+++|+|++ ..|++++.|+
T Consensus 186 l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg----~~l~s~s~D~ 261 (611)
T 1nr0_A 186 FGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDG----TKIASASADK 261 (611)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTS----SEEEEEETTS
T ss_pred eccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCC----CEEEEEeCCC
Confidence 45899999999998 4679999999999999996 467777774 899999999999954 4799999999
Q ss_pred cEEEEeccccccccCcc----------------------------------ccceeeeeeccccceEEEEEeCCCCEEEE
Q 036314 91 TLRLWKFDAEELVNHPK----------------------------------KIRSFKILRGHKASVHSIAAETSGNMVCS 136 (347)
Q Consensus 91 ~v~~wd~~~~~~~~~~~----------------------------------~~~~~~~~~~h~~~V~~v~~s~~~~~l~s 136 (347)
+|++||+.++++..... ..+....+.+|..+|.+++|+|+|++|++
T Consensus 262 ~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s 341 (611)
T 1nr0_A 262 TIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFS 341 (611)
T ss_dssp EEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred eEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEE
Confidence 99999998765432110 01234466799999999999999999999
Q ss_pred eeCCCcEEEEecCCCCCCCc-------cce-eeeccCCC------------------cccc---------cc-------c
Q 036314 137 GSWDCTISLWRTNDSDAAGN-------QVS-IKKRKGNN------------------QVEE---------PQ-------L 174 (347)
Q Consensus 137 gs~Dg~I~iwd~~~~~~~~~-------~~~-~~~~~~~~------------------~~~~---------~~-------~ 174 (347)
++.|++|++||+.++..... .+. +....... .... .. .
T Consensus 342 ~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 421 (611)
T 1nr0_A 342 ADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSA 421 (611)
T ss_dssp EETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECT
T ss_pred EeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeC
Confidence 99999999999876532100 000 00000000 0000 00 0
Q ss_pred cc----------------cccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCce--eeeeeeCeeeEEEEee
Q 036314 175 EG----------------EAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKD--LSDIFCGKALNCIDIG 235 (347)
Q Consensus 175 ~~----------------~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~--~~~~~~~~~~~~~~~~ 235 (347)
.+ ..+..+ .|...+.+++| |++++|++++.|++|++||+..+.. .....+...+.+++|+
T Consensus 422 dg~~~~~~~~~~v~~~~~~~~~~~-~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~~~h~~~v~~v~fs 500 (611)
T 1nr0_A 422 DGDIAVAACYKHIAIYSHGKLTEV-PISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFS 500 (611)
T ss_dssp TSSCEEEEESSEEEEEETTEEEEE-ECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEEEC
T ss_pred CCcEEEEEeCceEEEEeCCceeee-ecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeeccCCCCceEEEEEC
Confidence 00 001111 24556788888 6888999999999999999977543 2223345578999997
Q ss_pred CCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCc-cc-eeecC
Q 036314 236 GEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAW-PL-SVIDS 313 (347)
Q Consensus 236 ~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~-~~-~~~~~ 313 (347)
|+ +.+|++++.|++|++||+...........+.+|...|.+++|+|++. +||||+.|++|+|||++++. .+ ..+.+
T Consensus 501 pd-g~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~-~lasgs~D~~v~lW~~~~~~~~~~~~~~~ 578 (611)
T 1nr0_A 501 NN-GAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNV-RLATGSLDNSVIVWNMNKPSDHPIIIKGA 578 (611)
T ss_dssp TT-SSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTCTTSCCEEETTS
T ss_pred CC-CCEEEEEcCCCCEEEEEcCCCCceeeeeeeeecccceeEEEECCCCC-EEEEEECCCcEEEEECCCcccccchhhcc
Confidence 65 56889999999999999864222111112345999999999999986 59999999999999998765 33 56789
Q ss_pred C-CCeEEEEeecCCCEEEEccCCceEEEeec
Q 036314 314 H-KDKVLCADWWRGDSVISGGVDSKLCVSSG 343 (347)
Q Consensus 314 h-~~~v~~~~~~~~~~l~s~s~D~~v~vw~~ 343 (347)
| .+.|++++|+|+.+|+|+|.|++|++|+.
T Consensus 579 h~~~~v~~v~fs~d~~l~s~~~D~~i~lW~~ 609 (611)
T 1nr0_A 579 HAMSSVNSVIWLNETTIVSAGQDSNIKFWNV 609 (611)
T ss_dssp STTSCEEEEEEEETTEEEEEETTSCEEEEEC
T ss_pred CcccCeeEEEEcCCCEEEEecCCCCEEEEec
Confidence 9 89999999987666999999999999986
No 15
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=3e-42 Score=314.09 Aligned_cols=282 Identities=22% Similarity=0.373 Sum_probs=228.5
Q ss_pred CcCCceeeccCC-CCCEEEEEecCCeEEEEcC-CCeEEEEeeccCC------------------ceEEEEEeecCCCceE
Q 036314 22 LHDDWVSAVDGS-NPGFILTGCYDNLGRVWKA-GGVCTHILEGHCG------------------AVSSVNIIKSDGLKYV 81 (347)
Q Consensus 22 ~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~-~~~~~~~l~~h~~------------------~V~~v~~~~~~~~~~~ 81 (347)
+|...|.+++|+ ++.+||+|+ |+++++|+. .+..+..+.+|.. .|.+++|+|++ .
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg----~ 136 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDG----K 136 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTS----S
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCC----C
Confidence 599999999998 456888876 789999996 4667767766542 38999999854 4
Q ss_pred EEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceee
Q 036314 82 TVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIK 161 (347)
Q Consensus 82 ~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~ 161 (347)
.|++|+.|++|++||+.+++ ....+.+|...|.+++|+|++++|++++.|++|++||+.++.
T Consensus 137 ~l~s~~~d~~i~iwd~~~~~---------~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~--------- 198 (393)
T 1erj_A 137 FLATGAEDRLIRIWDIENRK---------IVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQ--------- 198 (393)
T ss_dssp EEEEEETTSCEEEEETTTTE---------EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE---------
T ss_pred EEEEEcCCCeEEEEECCCCc---------EEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCe---------
Confidence 79999999999999997654 455788999999999999999999999999999999987542
Q ss_pred eccCCCccccccccccccccccCCccceEEEEe-C-CCCeEEEEecCCcEEEEECCCCceeeeee--------eCeeeEE
Q 036314 162 KRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-P-QQETIYSASWDHSVRTWDVEMGKDLSDIF--------CGKALNC 231 (347)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~-~~~~l~s~s~dg~v~vwd~~~~~~~~~~~--------~~~~~~~ 231 (347)
+...+. +...+.+++| | ++.+|++++.|++|++||++++..+..+. +...+.+
T Consensus 199 ----------------~~~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~ 261 (393)
T 1erj_A 199 ----------------CSLTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYS 261 (393)
T ss_dssp ----------------EEEEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEE
T ss_pred ----------------eEEEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEE
Confidence 111222 4456778877 4 67889999999999999999887766552 2346889
Q ss_pred EEeeCCCCcEEEEecCCCcEEEEeCCCCCC---------CCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEc
Q 036314 232 IDIGGEGSALIAAGGSDPILRIWDPRKPGT---------SAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDL 302 (347)
Q Consensus 232 ~~~~~~~~~~la~~~~d~~i~iwd~~~~~~---------~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~ 302 (347)
++|+++ +.++++|+.|+.|++||++.... ......+.+|.+.|.+++|+|++. +|++|+.|++|++||+
T Consensus 262 v~~~~~-g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~sgs~D~~v~iwd~ 339 (393)
T 1erj_A 262 VVFTRD-GQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDE-YILSGSKDRGVLFWDK 339 (393)
T ss_dssp EEECTT-SSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGC-EEEEEETTSEEEEEET
T ss_pred EEECCC-CCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCC-EEEEEeCCCeEEEEEC
Confidence 999765 56889999999999999875321 122456789999999999999986 5999999999999999
Q ss_pred CCCccceeecCCCCeEEEEeecC-------CCEEEEccCCceEEEeeccc
Q 036314 303 RTAWPLSVIDSHKDKVLCADWWR-------GDSVISGGVDSKLCVSSGVS 345 (347)
Q Consensus 303 ~~~~~~~~~~~h~~~v~~~~~~~-------~~~l~s~s~D~~v~vw~~~~ 345 (347)
++++++..+.+|.+.|.+++|++ ++.|||||.|++|+||+...
T Consensus 340 ~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 340 KSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp TTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred CCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcccc
Confidence 99999999999999999999975 56799999999999998653
No 16
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=4.1e-42 Score=330.47 Aligned_cols=284 Identities=19% Similarity=0.202 Sum_probs=235.8
Q ss_pred CCCCCcCCceeeccCCC-CCEEEEEecCCeEEEEcCC---CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCC----
Q 036314 18 EEPSLHDDWVSAVDGSN-PGFILTGCYDNLGRVWKAG---GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKD---- 89 (347)
Q Consensus 18 ~~~~~h~~~v~~~~~~~-~~~l~sg~~d~~i~iw~~~---~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~D---- 89 (347)
....+|++.|++++|++ +.+||||+.|++|||||.. ......+.+|.+.|.+++|+|++ ..|++++.+
T Consensus 53 ~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg----~~l~~~~~~~~~~ 128 (611)
T 1nr0_A 53 EIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSES----KRIAAVGEGRERF 128 (611)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTS----CEEEEEECCSSCS
T ss_pred eEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCC----CEEEEEECCCCce
Confidence 34668999999999984 6799999999999999973 34566789999999999999954 367777765
Q ss_pred CcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCC-EEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCc
Q 036314 90 QTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGN-MVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQ 168 (347)
Q Consensus 90 g~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~-~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~ 168 (347)
++|++||... ....+.+|...|.+++|+|++. .|++|+.|++|++||....
T Consensus 129 ~~v~~wd~~~-----------~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~----------------- 180 (611)
T 1nr0_A 129 GHVFLFDTGT-----------SNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPF----------------- 180 (611)
T ss_dssp EEEEETTTCC-----------BCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTB-----------------
T ss_pred eEEEEeeCCC-----------CcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCC-----------------
Confidence 4788888432 2345789999999999999987 6999999999999997532
Q ss_pred cccccccccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeee--------eCeeeEEEEeeCCCC
Q 036314 169 VEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIF--------CGKALNCIDIGGEGS 239 (347)
Q Consensus 169 ~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~--------~~~~~~~~~~~~~~~ 239 (347)
+...++.+|...|.+++| |++++|++++.|++|++||+++++.+..+. +...+.+++|+|+ +
T Consensus 181 --------~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spd-g 251 (611)
T 1nr0_A 181 --------KFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPD-G 251 (611)
T ss_dssp --------EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTT-S
T ss_pred --------eEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCC-C
Confidence 335577899999999998 578899999999999999999988776662 3457899999765 5
Q ss_pred cEEEEecCCCcEEEEeCCCCCCC----------------------------------------CCeEEecCCCCCeeEEE
Q 036314 240 ALIAAGGSDPILRIWDPRKPGTS----------------------------------------APVFQFSSHNSWISACK 279 (347)
Q Consensus 240 ~~la~~~~d~~i~iwd~~~~~~~----------------------------------------~~~~~~~~h~~~v~~v~ 279 (347)
.+|++++.|++|++||++..... .....+.+|...|.+++
T Consensus 252 ~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~ 331 (611)
T 1nr0_A 252 TKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALS 331 (611)
T ss_dssp SEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEE
T ss_pred CEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEE
Confidence 68899999999999998742110 01234568999999999
Q ss_pred eCCCCCeEEEEEeCCCcEEEEEcCCCccceee-cCCCCeEEEEeecCCCEEEEccCCceEEEeec
Q 036314 280 WHNKSWFHLISASYDGKVMLWDLRTAWPLSVI-DSHKDKVLCADWWRGDSVISGGVDSKLCVSSG 343 (347)
Q Consensus 280 ~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~-~~h~~~v~~~~~~~~~~l~s~s~D~~v~vw~~ 343 (347)
|+|++. +|++++.|++|++||+++++....+ .+|...|.+++|+++..|++++.|+++++|+.
T Consensus 332 ~spdg~-~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~ 395 (611)
T 1nr0_A 332 SSADGK-TLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPA 395 (611)
T ss_dssp ECTTSS-EEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECS
T ss_pred EeCCCC-EEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeec
Confidence 999986 5999999999999999998776655 67999999999998889999999999999984
No 17
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=7.9e-42 Score=325.70 Aligned_cols=276 Identities=26% Similarity=0.415 Sum_probs=238.0
Q ss_pred CCCCcCCceeeccCCC-CCEEEEEecCCeEEEEcCCCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEec
Q 036314 19 EPSLHDDWVSAVDGSN-PGFILTGCYDNLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKF 97 (347)
Q Consensus 19 ~~~~h~~~v~~~~~~~-~~~l~sg~~d~~i~iw~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~ 97 (347)
...+|...|+++++++ +.+|++++.|++|++||..+.....+.+|...|.+++|+|++ ..|++++.|++|++|+.
T Consensus 298 ~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~~~~~~~~~v~~~~~s~~g----~~l~~~~~dg~v~~~~~ 373 (577)
T 2ymu_A 298 TLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQTLTGHSSSVWGVAFSPDG----QTIASASDDKTVKLWNR 373 (577)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTS----SEEEEEETTSEEEEEET
T ss_pred EEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeeEEEeCCCCCEEEEEECCCC----CEEEEEeCCCEEEEEcC
Confidence 3558999999999884 579999999999999999888888899999999999999854 47999999999999996
Q ss_pred cccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccccc
Q 036314 98 DAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGE 177 (347)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (347)
+. +.+..+.+|..+|.+++|+|++++|++++.|++|++||... +
T Consensus 374 ~~----------~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~--------------------------~ 417 (577)
T 2ymu_A 374 NG----------QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG--------------------------Q 417 (577)
T ss_dssp TC----------CEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTC--------------------------C
T ss_pred CC----------CEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCC--------------------------C
Confidence 43 24567889999999999999999999999999999998532 2
Q ss_pred ccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeeee-CeeeEEEEeeCCCCcEEEEecCCCcEEEEe
Q 036314 178 AISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFC-GKALNCIDIGGEGSALIAAGGSDPILRIWD 255 (347)
Q Consensus 178 ~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~la~~~~d~~i~iwd 255 (347)
.+..+.+|...|.+++| |++++|++++.|++|++||. +++.+..+.. ...+.+++++|+ +.++++++.|+.|++||
T Consensus 418 ~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd-~~~las~~~d~~i~iw~ 495 (577)
T 2ymu_A 418 LLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPD-GQTIASASDDKTVKLWN 495 (577)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTT-SCEEEEEETTSEEEEEE
T ss_pred EEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEEEEcCC-CCEEEEEeCCCEEEEEc
Confidence 34567789999999998 57889999999999999996 4555555543 457889999765 56889999999999999
Q ss_pred CCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeecC-CCEEEEccC
Q 036314 256 PRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGV 334 (347)
Q Consensus 256 ~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~ 334 (347)
.. ...+..+.+|...|.+++|+|++. +||+++.|+.|+|||. +++.+.++.+|.+.|++++|+| |++|+|+|.
T Consensus 496 ~~----~~~~~~~~~h~~~v~~l~~s~dg~-~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~ 569 (577)
T 2ymu_A 496 RN----GQLLQTLTGHSSSVRGVAFSPDGQ-TIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASS 569 (577)
T ss_dssp TT----SCEEEEEECCSSCEEEEEECTTSS-CEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEET
T ss_pred CC----CCEEEEEeCCCCCEEEEEEcCCCC-EEEEEECcCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeC
Confidence 64 234678899999999999999986 5999999999999996 5778899999999999999985 778999999
Q ss_pred CceEEEee
Q 036314 335 DSKLCVSS 342 (347)
Q Consensus 335 D~~v~vw~ 342 (347)
|++|+||+
T Consensus 570 D~~i~~Wd 577 (577)
T 2ymu_A 570 DKTVKLWN 577 (577)
T ss_dssp TSCEEEEC
T ss_pred CCEEEEeC
Confidence 99999996
No 18
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2.3e-41 Score=297.62 Aligned_cols=248 Identities=17% Similarity=0.276 Sum_probs=210.8
Q ss_pred EEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEE
Q 036314 56 CTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVC 135 (347)
Q Consensus 56 ~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~ 135 (347)
..++|.+|.+.|.+++|+|++ ..|++++.||+|++||+.+++ .+..+..|..+|.+++|++++++|+
T Consensus 5 ~~~~~~~h~~~V~~~~fsp~~----~~l~s~~~dg~v~lWd~~~~~---------~~~~~~~~~~~v~~~~~~~~~~~l~ 71 (304)
T 2ynn_A 5 IKKTFSNRSDRVKGIDFHPTE----PWVLTTLYSGRVELWNYETQV---------EVRSIQVTETPVRAGKFIARKNWII 71 (304)
T ss_dssp CEEEEEEECSCEEEEEECSSS----SEEEEEETTSEEEEEETTTTE---------EEEEEECCSSCEEEEEEEGGGTEEE
T ss_pred eEEeecCCCCceEEEEECCCC----CEEEEEcCCCcEEEEECCCCc---------eeEEeeccCCcEEEEEEeCCCCEEE
Confidence 356799999999999999954 379999999999999997653 4567789999999999999999999
Q ss_pred EeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEEC
Q 036314 136 SGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDV 214 (347)
Q Consensus 136 sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~ 214 (347)
+|+.|++|++||+.++ +.+..+.+|...|.+++| |++++|++++.|++|++||+
T Consensus 72 s~s~d~~i~vwd~~~~-------------------------~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~ 126 (304)
T 2ynn_A 72 VGSDDFRIRVFNYNTG-------------------------EKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNW 126 (304)
T ss_dssp EEETTSEEEEEETTTC-------------------------CEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEG
T ss_pred EECCCCEEEEEECCCC-------------------------cEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEEC
Confidence 9999999999998754 345577889999999998 57789999999999999999
Q ss_pred CCCceeee-ee-eCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCC--CCCeEEEE
Q 036314 215 EMGKDLSD-IF-CGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHN--KSWFHLIS 290 (347)
Q Consensus 215 ~~~~~~~~-~~-~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~--~~~~~l~s 290 (347)
+++..... +. +...+.+++|+|.++.++++|+.|++|++||++.... ......+|...+..+.|+| ++ .+|++
T Consensus 127 ~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~-~~l~s 203 (304)
T 2ynn_A 127 ENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTP--NFTLTTGQERGVNYVDYYPLPDK-PYMIT 203 (304)
T ss_dssp GGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSC--SEEEECCCTTCEEEEEECCSTTC-CEEEE
T ss_pred CCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCc--cceeccCCcCcEEEEEEEEcCCC-CEEEE
Confidence 88754433 33 2346899999887778999999999999999975322 2333346667899999987 44 46999
Q ss_pred EeCCCcEEEEEcCCCccceeecCCCCeEEEEeecC-CCEEEEccCCceEEEeecc
Q 036314 291 ASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 291 ~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~D~~v~vw~~~ 344 (347)
|+.|++|++||+++++.+.++.+|.+.|.+++|+| +.+|+||+.|++|+||+..
T Consensus 204 ~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~ 258 (304)
T 2ynn_A 204 ASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSS 258 (304)
T ss_dssp EETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETT
T ss_pred EcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECC
Confidence 99999999999999999999999999999999986 6689999999999999965
No 19
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.8e-40 Score=296.83 Aligned_cols=242 Identities=18% Similarity=0.246 Sum_probs=198.9
Q ss_pred CcCCceeeccCCCCCEEEEEecCCeEEEEcCC-CeE----EEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEe
Q 036314 22 LHDDWVSAVDGSNPGFILTGCYDNLGRVWKAG-GVC----THILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWK 96 (347)
Q Consensus 22 ~h~~~v~~~~~~~~~~l~sg~~d~~i~iw~~~-~~~----~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd 96 (347)
.|...|.+++|++++.|++|+.||+|||||+. +++ ...+.+|.+.|.+++|+|++ .+|++|+.|++|++||
T Consensus 80 ~~~~~v~~~~~s~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg----~~l~sgs~d~~i~iwd 155 (344)
T 4gqb_B 80 QTEAGVADLTWVGERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSG----TQAVSGSKDICIKVWD 155 (344)
T ss_dssp EESSCEEEEEEETTTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTS----SEEEEEETTSCEEEEE
T ss_pred ccCCCEEEEEEeCCCeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCC----CEEEEEeCCCeEEEEE
Confidence 36678999999988899999999999999974 332 23466999999999999954 4799999999999999
Q ss_pred ccccccccCccccceeeeeeccccceEEEEEeCCCC-EEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccc
Q 036314 97 FDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGN-MVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLE 175 (347)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~-~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (347)
+.+++ ++..+.+|...|.+++|++++. +|++++.|++|++||++++..
T Consensus 156 ~~~~~---------~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~---------------------- 204 (344)
T 4gqb_B 156 LAQQV---------VLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKP---------------------- 204 (344)
T ss_dssp TTTTE---------EEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSC----------------------
T ss_pred CCCCc---------EEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccce----------------------
Confidence 98764 5567889999999999999984 789999999999999876432
Q ss_pred ccccccc--cCCccceEEEEeC--CCCeEEEEecCCcEEEEECCCCceeeeeee-CeeeEEEEeeCCCCcEEEEecCCCc
Q 036314 176 GEAISTL--VGHTQCVSSVVWP--QQETIYSASWDHSVRTWDVEMGKDLSDIFC-GKALNCIDIGGEGSALIAAGGSDPI 250 (347)
Q Consensus 176 ~~~~~~~--~~h~~~v~~~~~~--~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~la~~~~d~~ 250 (347)
...+ ..|...+.+++|. ++++|++++.|++|++||+++++.+..+.. ...+.+++|+|++..+|++|+.|++
T Consensus 205 ---~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~ 281 (344)
T 4gqb_B 205 ---ASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCS 281 (344)
T ss_dssp ---EEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSC
T ss_pred ---eeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCe
Confidence 1111 2345567888874 345789999999999999999988887764 4578999998877778999999999
Q ss_pred EEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCC
Q 036314 251 LRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTA 305 (347)
Q Consensus 251 i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~ 305 (347)
|+|||++.. .+..+.+|.+.|.+++|+|++.++|+||+.|++|++|++.+.
T Consensus 282 i~vwd~~~~----~~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~ 332 (344)
T 4gqb_B 282 LAVLDSSLS----ELFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTE 332 (344)
T ss_dssp EEEECTTCC----EEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC-
T ss_pred EEEEECCCC----cEEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCC
Confidence 999998742 256788999999999999999888999999999999999764
No 20
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.1e-40 Score=303.59 Aligned_cols=255 Identities=27% Similarity=0.401 Sum_probs=217.9
Q ss_pred EEEcCCCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEE
Q 036314 48 RVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAA 127 (347)
Q Consensus 48 ~iw~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~ 127 (347)
+.|.........+.+|.+.|++++|+|++ ..|++|+.||+|++||+.+++ ...++.+|..+|.+++|
T Consensus 92 ~~~~~~~~~~~~l~gh~~~V~~~~~~p~~----~~l~s~s~Dg~i~vwd~~~~~---------~~~~l~~h~~~V~~v~~ 158 (410)
T 1vyh_C 92 KEWIPRPPEKYALSGHRSPVTRVIFHPVF----SVMVSASEDATIKVWDYETGD---------FERTLKGHTDSVQDISF 158 (410)
T ss_dssp CCCCCCSSCSCEEECCSSCEEEEEECSSS----SEEEEEESSSCEEEEETTTCC---------CCEEECCCSSCEEEEEE
T ss_pred cccccCCCceEeecccCCcEEEEEEcCCC----CEEEEEeCCCeEEEEECCCCc---------EEEEEeccCCcEEEEEE
Confidence 34544333445688999999999999954 379999999999999998764 34578899999999999
Q ss_pred eCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CCCCeEEEEecC
Q 036314 128 ETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWD 206 (347)
Q Consensus 128 s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~d 206 (347)
+|++++|++|+.|++|++||+.+. .++..+.+|...|.++.| |+++.|++++.|
T Consensus 159 ~~~~~~l~sgs~D~~i~iwd~~~~-------------------------~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D 213 (410)
T 1vyh_C 159 DHSGKLLASCSADMTIKLWDFQGF-------------------------ECIRTMHGHDHNVSSVSIMPNGDHIVSASRD 213 (410)
T ss_dssp CTTSSEEEEEETTSCCCEEETTSS-------------------------CEEECCCCCSSCEEEEEECSSSSEEEEEETT
T ss_pred cCCCCEEEEEeCCCeEEEEeCCCC-------------------------ceeEEEcCCCCCEEEEEEeCCCCEEEEEeCC
Confidence 999999999999999999998653 345677889999999998 577899999999
Q ss_pred CcEEEEECCCCceeeeeeeC-eeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCC-
Q 036314 207 HSVRTWDVEMGKDLSDIFCG-KALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKS- 284 (347)
Q Consensus 207 g~v~vwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~- 284 (347)
++|++||++++..+..+..+ ..+.++.+.+ ++.++++|+.|+.|++||++.. .....+.+|...|.+++|+|++
T Consensus 214 ~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~-~g~~l~s~s~D~~v~vwd~~~~---~~~~~~~~h~~~v~~~~~~~~~~ 289 (410)
T 1vyh_C 214 KTIKMWEVQTGYCVKTFTGHREWVRMVRPNQ-DGTLIASCSNDQTVRVWVVATK---ECKAELREHRHVVECISWAPESS 289 (410)
T ss_dssp SEEEEEETTTCCEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTC---CEEEEECCCSSCEEEEEECCSCG
T ss_pred CeEEEEECCCCcEEEEEeCCCccEEEEEECC-CCCEEEEEcCCCeEEEEECCCC---ceeeEecCCCceEEEEEEcCccc
Confidence 99999999999888777643 4578888865 4568899999999999999753 3466788999999999999963
Q ss_pred ------------------CeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeecC-CCEEEEccCCceEEEeecc
Q 036314 285 ------------------WFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 285 ------------------~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~D~~v~vw~~~ 344 (347)
..+|++|+.|++|++||+++++++.++.+|.+.|.++.|++ |.+|++|+.|++|+||+..
T Consensus 290 ~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~ 368 (410)
T 1vyh_C 290 YSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 368 (410)
T ss_dssp GGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCT
T ss_pred ccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 24699999999999999999999999999999999999985 6789999999999999864
No 21
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.3e-39 Score=310.39 Aligned_cols=277 Identities=25% Similarity=0.410 Sum_probs=238.2
Q ss_pred CCCCcCCceeeccCC-CCCEEEEEecCCeEEEEcCCCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEec
Q 036314 19 EPSLHDDWVSAVDGS-NPGFILTGCYDNLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKF 97 (347)
Q Consensus 19 ~~~~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~ 97 (347)
...+|...|++++++ ++.+|++++.|+++++|+..+.....+.+|...|.+++|+|++ ..|++++.|++|++||+
T Consensus 257 ~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~~~~~~~~~h~~~v~~~~~~~~~----~~l~t~~~d~~i~~w~~ 332 (577)
T 2ymu_A 257 TLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDG----QTIASASDDKTVKLWNR 332 (577)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTS----SEEEEEETTSCEEEEET
T ss_pred EEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCCcEEEEEecCCCCeEEEEECCCC----CEEEEEeCCCeEEEEeC
Confidence 355799999999988 4679999999999999999888889999999999999999854 37999999999999998
Q ss_pred cccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccccc
Q 036314 98 DAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGE 177 (347)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (347)
... .+..+.+|..+|.+++|+|+++++++++.|++|++|+... .
T Consensus 333 ~~~----------~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~--------------------------~ 376 (577)
T 2ymu_A 333 NGQ----------HLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG--------------------------Q 376 (577)
T ss_dssp TSC----------EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTC--------------------------C
T ss_pred CCC----------eeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCCC--------------------------C
Confidence 643 3456788999999999999999999999999999998532 2
Q ss_pred ccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeeee-CeeeEEEEeeCCCCcEEEEecCCCcEEEEe
Q 036314 178 AISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFC-GKALNCIDIGGEGSALIAAGGSDPILRIWD 255 (347)
Q Consensus 178 ~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~la~~~~d~~i~iwd 255 (347)
.+..+.+|...|.+++| |++++|++++.|+.|++||. +++.+..+.. ...+.+++++|+ +.++++++.|+.|++||
T Consensus 377 ~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d-~~~l~~~~~d~~v~~w~ 454 (577)
T 2ymu_A 377 LLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPD-DQTIASASDDKTVKLWN 454 (577)
T ss_dssp EEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECTT-SSEEEEEETTSEEEEEE
T ss_pred EEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECCC-CCEEEEEcCCCEEEEEE
Confidence 34567789999999998 57889999999999999995 4555555543 457889999765 46889999999999999
Q ss_pred CCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeecC-CCEEEEccC
Q 036314 256 PRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGV 334 (347)
Q Consensus 256 ~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~ 334 (347)
... ..+..+.+|...|.+++|+|++. +|++++.|++|++||. +++.+..+.+|.+.|.+++|+| |++||+++.
T Consensus 455 ~~~----~~~~~~~~~~~~v~~~~~spd~~-~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~ 528 (577)
T 2ymu_A 455 RNG----QLLQTLTGHSSSVRGVAFSPDGQ-TIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASD 528 (577)
T ss_dssp TTS----CEEEEEECCSSCEEEEEECTTSC-EEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEET
T ss_pred CCC----CEEEEEcCCCCCEEEEEEcCCCC-EEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEEC
Confidence 642 34677889999999999999986 5999999999999996 5778889999999999999985 778999999
Q ss_pred CceEEEeec
Q 036314 335 DSKLCVSSG 343 (347)
Q Consensus 335 D~~v~vw~~ 343 (347)
|++|+||+-
T Consensus 529 dg~v~lwd~ 537 (577)
T 2ymu_A 529 DKTVKLWNR 537 (577)
T ss_dssp TSEEEEECT
T ss_pred cCEEEEEeC
Confidence 999999984
No 22
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=5.3e-40 Score=291.16 Aligned_cols=254 Identities=22% Similarity=0.289 Sum_probs=211.8
Q ss_pred CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCE
Q 036314 54 GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNM 133 (347)
Q Consensus 54 ~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~ 133 (347)
+...+.+.+|.+.|.+++|+++...++..|+||+.|++||+|++..++. .....+.+|..+|.+++|++++.+
T Consensus 22 g~~~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~-------~~~~~l~gh~~~v~~~~~~~~~~~ 94 (321)
T 3ow8_A 22 GILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERL-------DLQWSLEGHQLGVVSVDISHTLPI 94 (321)
T ss_dssp EEEEEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEE-------EEEEEECCCSSCEEEEEECSSSSE
T ss_pred hheeeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCe-------eeeeeeccCCCCEEEEEECCCCCE
Confidence 4455677899999999999885433455899999999999999875432 234467899999999999999999
Q ss_pred EEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEE
Q 036314 134 VCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTW 212 (347)
Q Consensus 134 l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vw 212 (347)
+++++.|++|++||+.++ +.+..+..|...+.+++| |++++|++++.|+.|++|
T Consensus 95 l~s~s~D~~i~lWd~~~~-------------------------~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~ 149 (321)
T 3ow8_A 95 AASSSLDAHIRLWDLENG-------------------------KQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIF 149 (321)
T ss_dssp EEEEETTSEEEEEETTTT-------------------------EEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEE
T ss_pred EEEEeCCCcEEEEECCCC-------------------------CEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEE
Confidence 999999999999998753 234455667777888888 678899999999999999
Q ss_pred ECCCCceeeeeee-CeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEE
Q 036314 213 DVEMGKDLSDIFC-GKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291 (347)
Q Consensus 213 d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~ 291 (347)
|+++++....+.. ...+.+++++|+ +.+|++|+.|+.|++||++.. ..+..+.+|...|.+++|+|++. +|++|
T Consensus 150 ~~~~~~~~~~~~~~~~~v~~~~~spd-g~~lasg~~dg~i~iwd~~~~---~~~~~~~~h~~~v~~l~~spd~~-~l~s~ 224 (321)
T 3ow8_A 150 GVESGKKEYSLDTRGKFILSIAYSPD-GKYLASGAIDGIINIFDIATG---KLLHTLEGHAMPIRSLTFSPDSQ-LLVTA 224 (321)
T ss_dssp ETTTCSEEEEEECSSSCEEEEEECTT-SSEEEEEETTSCEEEEETTTT---EEEEEECCCSSCCCEEEECTTSC-EEEEE
T ss_pred EcCCCceeEEecCCCceEEEEEECCC-CCEEEEEcCCCeEEEEECCCC---cEEEEEcccCCceeEEEEcCCCC-EEEEE
Confidence 9999887766654 346889999765 568899999999999999753 34678899999999999999986 69999
Q ss_pred eCCCcEEEEEcCCCccceeecCCCCeEEEEeecC-CCEEEEccCCceEEEeecc
Q 036314 292 SYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 292 s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~D~~v~vw~~~ 344 (347)
+.|++|++||+++++...++.+|.+.|.+++|+| +.+|++++.|++|+||+..
T Consensus 225 s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~ 278 (321)
T 3ow8_A 225 SDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVG 278 (321)
T ss_dssp CTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred cCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCC
Confidence 9999999999999988899999999999999985 6789999999999999864
No 23
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=9.6e-40 Score=296.89 Aligned_cols=296 Identities=17% Similarity=0.206 Sum_probs=239.4
Q ss_pred CCCCCcCCceeeccCCCCCEEEEEecCCeEEEEcCC-Ce------EEEEeeccCCceEEEEEeecCCCce---EEEEEcc
Q 036314 18 EEPSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAG-GV------CTHILEGHCGAVSSVNIIKSDGLKY---VTVATAS 87 (347)
Q Consensus 18 ~~~~~h~~~v~~~~~~~~~~l~sg~~d~~i~iw~~~-~~------~~~~l~~h~~~V~~v~~~~~~~~~~---~~l~s~s 87 (347)
....+|.+.|+++++++ .+|++|+.||+|++|+.. +. ....+.+|...|.++.|+++...++ ..|++++
T Consensus 10 ~~~~~h~~~i~~~~~~~-~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~ 88 (397)
T 1sq9_A 10 NAGKAHDADIFSVSACN-SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTS 88 (397)
T ss_dssp EESSCSSSCEEEEEECS-SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEE
T ss_pred hhhhhhhcCeEEEEecC-CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEc
Confidence 44678999999999977 899999999999999975 33 5778889999999999998500013 5799999
Q ss_pred CCCcEEEEeccccccccCccccceeeeeecc-----ccceEEEEEe----CCCCE-EEEeeCCCcEEEEecCC------C
Q 036314 88 KDQTLRLWKFDAEELVNHPKKIRSFKILRGH-----KASVHSIAAE----TSGNM-VCSGSWDCTISLWRTND------S 151 (347)
Q Consensus 88 ~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h-----~~~V~~v~~s----~~~~~-l~sgs~Dg~I~iwd~~~------~ 151 (347)
.|++|++|++..++.. .......+..| ...|.+++|+ |++++ |++++.|+.|++||+.. .
T Consensus 89 ~dg~i~iw~~~~~~~~----~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 164 (397)
T 1sq9_A 89 FSGDLLFYRITREDET----KKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNS 164 (397)
T ss_dssp TTSCEEEEEEEECTTT----CCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHH
T ss_pred CCCCEEEEEccCCccc----ccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcccccccc
Confidence 9999999999865420 01124567778 5999999999 99999 99999999999999875 2
Q ss_pred CCCCccceeeeccCCCccccccccccccccc-------cCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeee
Q 036314 152 DAAGNQVSIKKRKGNNQVEEPQLEGEAISTL-------VGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDI 223 (347)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~ 223 (347)
.... ......+ ..|...+.++.| +++ .+++++.|+.|++||+++++.+..+
T Consensus 165 ~~~~--------------------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~ 223 (397)
T 1sq9_A 165 LTLN--------------------WSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNF 223 (397)
T ss_dssp TTTC--------------------CCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEE
T ss_pred ceee--------------------ccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEE
Confidence 1100 0000022 447888999998 466 9999999999999999998888777
Q ss_pred ee-------CeeeEEEEeeCCCCcEEEEecCC---CcEEEEeCCCCCCCCCeEEecC-------------CCCCeeEEEe
Q 036314 224 FC-------GKALNCIDIGGEGSALIAAGGSD---PILRIWDPRKPGTSAPVFQFSS-------------HNSWISACKW 280 (347)
Q Consensus 224 ~~-------~~~~~~~~~~~~~~~~la~~~~d---~~i~iwd~~~~~~~~~~~~~~~-------------h~~~v~~v~~ 280 (347)
.. ...+.+++++++ +.+|++++.| +.|++||++.. ..+..+.+ |...|.+++|
T Consensus 224 ~~~~~h~~~~~~i~~i~~~~~-~~~l~~~~~d~~~g~i~i~d~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 299 (397)
T 1sq9_A 224 ESQHSMINNSNSIRSVKFSPQ-GSLLAIAHDSNSFGCITLYETEFG---ERIGSLSVPTHSSQASLGEFAHSSWVMSLSF 299 (397)
T ss_dssp ECCC---CCCCCEEEEEECSS-TTEEEEEEEETTEEEEEEEETTTC---CEEEEECBC--------CCBSBSSCEEEEEE
T ss_pred eccccccccCCccceEEECCC-CCEEEEEecCCCCceEEEEECCCC---cccceeccCcccccccccccccCCcEEEEEE
Confidence 65 567899999765 5688899999 99999999753 34677777 9999999999
Q ss_pred CCCCCeEEEEEeCCCcEEEEEcCCCccceeec------CC---------------CCeEEEEeecCC-----------CE
Q 036314 281 HNKSWFHLISASYDGKVMLWDLRTAWPLSVID------SH---------------KDKVLCADWWRG-----------DS 328 (347)
Q Consensus 281 s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~------~h---------------~~~v~~~~~~~~-----------~~ 328 (347)
+|++. +|++++.|+.|++||+++++.+..+. +| ...|.+++|+++ ++
T Consensus 300 ~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~ 378 (397)
T 1sq9_A 300 NDSGE-TLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNES 378 (397)
T ss_dssp CSSSS-EEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCE
T ss_pred CCCCC-EEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccce
Confidence 99986 59999999999999999999888888 88 999999999864 68
Q ss_pred EEEccCCceEEEeecc
Q 036314 329 VISGGVDSKLCVSSGV 344 (347)
Q Consensus 329 l~s~s~D~~v~vw~~~ 344 (347)
|++++.|+.|+||+..
T Consensus 379 l~s~~~dg~i~iw~~~ 394 (397)
T 1sq9_A 379 LCCVCLDRSIRWFREA 394 (397)
T ss_dssp EEEEETTTEEEEEEEE
T ss_pred EEEecCCCcEEEEEcC
Confidence 9999999999999864
No 24
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=9.8e-40 Score=292.93 Aligned_cols=287 Identities=16% Similarity=0.208 Sum_probs=232.3
Q ss_pred CCCcCCceeeccCCC-----CCEEEEEecCCeEEEEcCC-CeEEEEeec-----cCCceEEEEEeecCCCceEEEEEccC
Q 036314 20 PSLHDDWVSAVDGSN-----PGFILTGCYDNLGRVWKAG-GVCTHILEG-----HCGAVSSVNIIKSDGLKYVTVATASK 88 (347)
Q Consensus 20 ~~~h~~~v~~~~~~~-----~~~l~sg~~d~~i~iw~~~-~~~~~~l~~-----h~~~V~~v~~~~~~~~~~~~l~s~s~ 88 (347)
..+|...|++++|++ ...+++++.++.|++|+.. +..+..+.. |...|.+++|+++...++..|++++.
T Consensus 14 ~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~ 93 (366)
T 3k26_A 14 KEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGS 93 (366)
T ss_dssp ECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEET
T ss_pred ecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecC
Confidence 448999999999984 3467777778899999975 544444443 56789999999975433568999999
Q ss_pred CCcEEEEeccccccccCccccceeeeeeccccceEEEEEeC-CCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCC
Q 036314 89 DQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAET-SGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNN 167 (347)
Q Consensus 89 Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~-~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~ 167 (347)
||+|++||+.+++ .+..+.+|..+|.+++|+| ++++|++++.|++|++||+.+..
T Consensus 94 dg~i~v~d~~~~~---------~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~--------------- 149 (366)
T 3k26_A 94 RGIIRIINPITMQ---------CIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDT--------------- 149 (366)
T ss_dssp TCEEEEECTTTCC---------EEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTE---------------
T ss_pred CCEEEEEEchhce---------EeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCe---------------
Confidence 9999999987654 4566789999999999999 89999999999999999987532
Q ss_pred ccccccccccccccc---cCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeee-------------------
Q 036314 168 QVEEPQLEGEAISTL---VGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIF------------------- 224 (347)
Q Consensus 168 ~~~~~~~~~~~~~~~---~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~------------------- 224 (347)
.+..+ .+|...|.++.| ++++.|++++.|+.|++||+++++....+.
T Consensus 150 ----------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (366)
T 3k26_A 150 ----------LVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKI 219 (366)
T ss_dssp ----------EEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEE
T ss_pred ----------EEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceee
Confidence 12233 679999999998 577899999999999999998775443222
Q ss_pred ----------eCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCC-----------CCCeEEecCCCCCeeEEEeCCC
Q 036314 225 ----------CGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGT-----------SAPVFQFSSHNSWISACKWHNK 283 (347)
Q Consensus 225 ----------~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~-----------~~~~~~~~~h~~~v~~v~~s~~ 283 (347)
....+.++.+. +.++++++.|+.|++||++.... ...+..+.+|...|.+++|+|+
T Consensus 220 ~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 296 (366)
T 3k26_A 220 HFPDFSTRDIHRNYVDCVRWL---GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMD 296 (366)
T ss_dssp CCCSEEECSSCSSCCCEEEEE---TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEEC
T ss_pred ccCccccccCCcceEEEEEEc---CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCC
Confidence 34467888886 35889999999999999875321 0235677889999999999999
Q ss_pred --CCeEEEEEeCCCcEEEEEcCCCccce----eecCC--CCeEEEEeecC-CCEEEEccCCceEEEeecc
Q 036314 284 --SWFHLISASYDGKVMLWDLRTAWPLS----VIDSH--KDKVLCADWWR-GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 284 --~~~~l~s~s~D~~i~lwd~~~~~~~~----~~~~h--~~~v~~~~~~~-~~~l~s~s~D~~v~vw~~~ 344 (347)
+. +|++|+.||.|++||++++++.. .+.+| .+.|.+++|++ +++|++++.||+|+||+..
T Consensus 297 ~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 297 FWQK-MLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp TTSS-EEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred CCCc-EEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 75 69999999999999999886544 67777 79999999985 7789999999999999864
No 25
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=6.1e-39 Score=285.24 Aligned_cols=281 Identities=25% Similarity=0.407 Sum_probs=227.8
Q ss_pred CCCcCCceeeccCCC--CCEEEEEecCCeEEEEcCC------CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCc
Q 036314 20 PSLHDDWVSAVDGSN--PGFILTGCYDNLGRVWKAG------GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQT 91 (347)
Q Consensus 20 ~~~h~~~v~~~~~~~--~~~l~sg~~d~~i~iw~~~------~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~ 91 (347)
+.||++.|+++++++ +++|||||.|++|++||+. +.+.+.+.+|...|.++.|+|++ ..|++++.|+.
T Consensus 34 L~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg----~~l~s~~~d~~ 109 (340)
T 4aow_A 34 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDG----QFALSGSWDGT 109 (340)
T ss_dssp ECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTS----SEEEEEETTSE
T ss_pred ECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCC----CEEEEEccccc
Confidence 568999999999984 4699999999999999963 24567899999999999999854 47999999999
Q ss_pred EEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccc
Q 036314 92 LRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEE 171 (347)
Q Consensus 92 v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 171 (347)
|++|+..... .......+...+..+.+++++++|++++.|+.+++||+....
T Consensus 110 i~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~------------------- 161 (340)
T 4aow_A 110 LRLWDLTTGT---------TTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVC------------------- 161 (340)
T ss_dssp EEEEETTTTE---------EEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCE-------------------
T ss_pred ceEEeecccc---------eeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCc-------------------
Confidence 9999987543 334456678888899999999999999999999999976421
Q ss_pred ccccccccccccCCccceEEEEeC---CCCeEEEEecCCcEEEEECCCCceeeeeee-CeeeEEEEeeCCCCcEEEEecC
Q 036314 172 PQLEGEAISTLVGHTQCVSSVVWP---QQETIYSASWDHSVRTWDVEMGKDLSDIFC-GKALNCIDIGGEGSALIAAGGS 247 (347)
Q Consensus 172 ~~~~~~~~~~~~~h~~~v~~~~~~---~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~la~~~~ 247 (347)
.....+.+|...+..+.|. ....+++++.|++|++||+++++.+..+.. ...+.+++++|+ +.+|++|+.
T Consensus 162 -----~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~-~~~l~s~s~ 235 (340)
T 4aow_A 162 -----KYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPD-GSLCASGGK 235 (340)
T ss_dssp -----EEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTT-SSEEEEEET
T ss_pred -----eEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCC-CCEEEEEeC
Confidence 1223456788889988874 234688999999999999999887776653 457899999765 568899999
Q ss_pred CCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceee---------cCCCCeE
Q 036314 248 DPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVI---------DSHKDKV 318 (347)
Q Consensus 248 d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~---------~~h~~~v 318 (347)
|+.|++||++.. ..+..+. +...|.++.|+|++. +++++.|+.|++||++++..+..+ .+|...|
T Consensus 236 Dg~i~iwd~~~~---~~~~~~~-~~~~v~~~~~~~~~~--~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v 309 (340)
T 4aow_A 236 DGQAMLWDLNEG---KHLYTLD-GGDIINALCFSPNRY--WLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQC 309 (340)
T ss_dssp TCEEEEEETTTT---EEEEEEE-CSSCEEEEEECSSSS--EEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCE
T ss_pred CCeEEEEEeccC---ceeeeec-CCceEEeeecCCCCc--eeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCE
Confidence 999999999753 3355554 456799999999873 677888999999999876554433 4789999
Q ss_pred EEEeecC-CCEEEEccCCceEEEeecc
Q 036314 319 LCADWWR-GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 319 ~~~~~~~-~~~l~s~s~D~~v~vw~~~ 344 (347)
++++|+| |++||+|+.||+|+||+..
T Consensus 310 ~~l~~s~dg~~l~sgs~Dg~v~iW~~~ 336 (340)
T 4aow_A 310 TSLAWSADGQTLFAGYTDNLVRVWQVT 336 (340)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEeCC
Confidence 9999985 7789999999999999853
No 26
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=3.3e-39 Score=314.71 Aligned_cols=283 Identities=26% Similarity=0.370 Sum_probs=225.7
Q ss_pred CCCcCCceeeccCCC--CCEEEEEecCCeEEEEcCC------CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCc
Q 036314 20 PSLHDDWVSAVDGSN--PGFILTGCYDNLGRVWKAG------GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQT 91 (347)
Q Consensus 20 ~~~h~~~v~~~~~~~--~~~l~sg~~d~~i~iw~~~------~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~ 91 (347)
..+|++.|++++++. +++|+|||.|++|++|+.. +.+.+.+.+|...|.+++|++++ .+|+||+.|++
T Consensus 378 l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g----~~l~sgs~Dg~ 453 (694)
T 3dm0_A 378 MRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDG----QFALSGSWDGE 453 (694)
T ss_dssp EECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTS----SEEEEEETTSE
T ss_pred cccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCC----CEEEEEeCCCc
Confidence 458999999999873 4699999999999999863 34567899999999999999854 47999999999
Q ss_pred EEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccc
Q 036314 92 LRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEE 171 (347)
Q Consensus 92 v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 171 (347)
|++||+.+++ ....+.+|...|.+++|+|++++|+||+.|++|++||+.....
T Consensus 454 v~vwd~~~~~---------~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~------------------ 506 (694)
T 3dm0_A 454 LRLWDLAAGV---------STRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECK------------------ 506 (694)
T ss_dssp EEEEETTTTE---------EEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEE------------------
T ss_pred EEEEECCCCc---------ceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcc------------------
Confidence 9999997654 4457889999999999999999999999999999999753200
Q ss_pred ccccccccccccCCccceEEEEeCC-C--CeEEEEecCCcEEEEECCCCceeeeeee-CeeeEEEEeeCCCCcEEEEecC
Q 036314 172 PQLEGEAISTLVGHTQCVSSVVWPQ-Q--ETIYSASWDHSVRTWDVEMGKDLSDIFC-GKALNCIDIGGEGSALIAAGGS 247 (347)
Q Consensus 172 ~~~~~~~~~~~~~h~~~v~~~~~~~-~--~~l~s~s~dg~v~vwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~la~~~~ 247 (347)
........+|...|.++.|+. + ..+++++.|++|++||+++++....+.. ...+.+++++++ +.+|++|+.
T Consensus 507 ----~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spd-g~~l~sg~~ 581 (694)
T 3dm0_A 507 ----YTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPD-GSLCASGGK 581 (694)
T ss_dssp ----EEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTT-SSEEEEEET
T ss_pred ----eeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCC-CCEEEEEeC
Confidence 011122357889999999853 3 4799999999999999998887766653 357899999765 568899999
Q ss_pred CCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCC------------
Q 036314 248 DPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHK------------ 315 (347)
Q Consensus 248 d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~------------ 315 (347)
|+.|++||++.. ..+..+. +...|.+++|+|++. +|++ +.|+.|+|||++++..+..+..|.
T Consensus 582 Dg~i~iwd~~~~---~~~~~~~-~~~~v~~~~~sp~~~-~l~~-~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 655 (694)
T 3dm0_A 582 DGVVLLWDLAEG---KKLYSLE-ANSVIHALCFSPNRY-WLCA-ATEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGP 655 (694)
T ss_dssp TSBCEEEETTTT---EEEECCB-CSSCEEEEEECSSSS-EEEE-EETTEEEEEETTTTEEEEEECCCCC-----------
T ss_pred CCeEEEEECCCC---ceEEEec-CCCcEEEEEEcCCCc-EEEE-EcCCCEEEEECCCCCChhhhcccccccccccccccc
Confidence 999999999753 2344443 456799999999974 3554 556779999999887766554321
Q ss_pred -------CeEEEEeecC-CCEEEEccCCceEEEeecc
Q 036314 316 -------DKVLCADWWR-GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 316 -------~~v~~~~~~~-~~~l~s~s~D~~v~vw~~~ 344 (347)
-.|.+++|+| |++|+||+.||+|+||+..
T Consensus 656 ~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 656 AATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp -----CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred ccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 1368899985 7789999999999999853
No 27
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=3.9e-39 Score=282.41 Aligned_cols=253 Identities=19% Similarity=0.336 Sum_probs=201.3
Q ss_pred EEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCC--CCEEE
Q 036314 58 HILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETS--GNMVC 135 (347)
Q Consensus 58 ~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~--~~~l~ 135 (347)
..+.+|.+.|.+++|++++ ..|++|+.|++|++||+...+ .+.+.++.+|.++|.+++|+++ +++|+
T Consensus 3 ~~~~~h~~~V~~~~~s~~g----~~las~s~D~~v~iw~~~~~~-------~~~~~~l~gH~~~V~~v~~s~~~~g~~l~ 71 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYG----KRMATCSSDKTIKIFEVEGET-------HKLIDTLTGHEGPVWRVDWAHPKFGTILA 71 (297)
T ss_dssp EECCSCSSCEEEEEECTTS----SEEEEEETTSCEEEEEBCSSC-------BCCCEEECCCSSCEEEEEECCGGGCSEEE
T ss_pred eeccCCcCceEEEEECCCC----CEEEEEeCCCEEEEEecCCCC-------cEEEEEEccccCCeEEEEecCCCcCCEEE
Confidence 3578999999999999854 479999999999999986432 1345678899999999999764 89999
Q ss_pred EeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeCC---CCeEEEEecCCcEEEE
Q 036314 136 SGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQ---QETIYSASWDHSVRTW 212 (347)
Q Consensus 136 sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~---~~~l~s~s~dg~v~vw 212 (347)
||+.|++|++||++++.. ..+..+.+|...|.+++|.+ +.+|++++.|++|++|
T Consensus 72 s~s~D~~v~iWd~~~~~~-----------------------~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~w 128 (297)
T 2pm7_B 72 SCSYDGKVMIWKEENGRW-----------------------SQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVV 128 (297)
T ss_dssp EEETTTEEEEEEBSSSCB-----------------------CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEE
T ss_pred EEcCCCEEEEEEcCCCce-----------------------EEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEE
Confidence 999999999999875321 12345677999999999953 6789999999999999
Q ss_pred ECCCCcee--eeee-eCeeeEEEEeeCCC------------CcEEEEecCCCcEEEEeCCCCCCC-CCeEEecCCCCCee
Q 036314 213 DVEMGKDL--SDIF-CGKALNCIDIGGEG------------SALIAAGGSDPILRIWDPRKPGTS-APVFQFSSHNSWIS 276 (347)
Q Consensus 213 d~~~~~~~--~~~~-~~~~~~~~~~~~~~------------~~~la~~~~d~~i~iwd~~~~~~~-~~~~~~~~h~~~v~ 276 (347)
|++.+... ..+. +...+.+++|+|.. +.+|++|+.|++|++||++..... .....+.+|.+.|.
T Consensus 129 d~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~ 208 (297)
T 2pm7_B 129 EFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVR 208 (297)
T ss_dssp EBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEE
T ss_pred EecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceE
Confidence 99876322 2222 23468888987652 468999999999999998753211 13467889999999
Q ss_pred EEEeCCCC--CeEEEEEeCCCcEEEEEcCCCcc---ceee--cCCCCeEEEEeecC-CCEEEEccCCceEEEeecc
Q 036314 277 ACKWHNKS--WFHLISASYDGKVMLWDLRTAWP---LSVI--DSHKDKVLCADWWR-GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 277 ~v~~s~~~--~~~l~s~s~D~~i~lwd~~~~~~---~~~~--~~h~~~v~~~~~~~-~~~l~s~s~D~~v~vw~~~ 344 (347)
+++|+|++ ..+||+++.|++|+|||++.+.. ...+ .+|.+.|++++|+| |++||+++.|++|+||+..
T Consensus 209 ~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 209 DVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp EEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred EEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 99999985 46799999999999999987431 1233 57889999999985 7789999999999999854
No 28
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-38 Score=279.67 Aligned_cols=278 Identities=18% Similarity=0.253 Sum_probs=233.5
Q ss_pred CCCCcCCceeeccCCCCCEEEEEecCCeEEEEcCC-CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEec
Q 036314 19 EPSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKF 97 (347)
Q Consensus 19 ~~~~h~~~v~~~~~~~~~~l~sg~~d~~i~iw~~~-~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~ 97 (347)
...+|.+.|+++++.++++|++|+.||+|++||.. +.....+..|...|.+++|+|++ ..|++++.|+.|++|++
T Consensus 13 ~l~~h~~~v~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~----~~l~~~~~dg~i~~~~~ 88 (313)
T 3odt_A 13 TLKGHDQDVRDVVAVDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEK----ELLLFGGKDTMINGVPL 88 (313)
T ss_dssp EECCCSSCEEEEEEEETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTT----TEEEEEETTSCEEEEET
T ss_pred HhhCCCCCcEEEEecCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCC----CEEEEecCCCeEEEEEe
Confidence 35689999999999667899999999999999975 56778899999999999999954 37999999999999998
Q ss_pred cccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccccc
Q 036314 98 DAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGE 177 (347)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (347)
.... ..+....+.+|..+|.+++| +++++++++.|++|++||.. .
T Consensus 89 ~~~~------~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d~~---------------------------~ 133 (313)
T 3odt_A 89 FATS------GEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWKEG---------------------------S 133 (313)
T ss_dssp TCCT------TSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETT---------------------------E
T ss_pred eecC------CCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEcCC---------------------------c
Confidence 6532 12345567899999999999 57899999999999999821 2
Q ss_pred ccccccCCccceEEEEe-C-CCCeEEEEecCCcEEEEECCCCceeeeee--eCeeeEEEEeeCCCCcEEEEecCCCcEEE
Q 036314 178 AISTLVGHTQCVSSVVW-P-QQETIYSASWDHSVRTWDVEMGKDLSDIF--CGKALNCIDIGGEGSALIAAGGSDPILRI 253 (347)
Q Consensus 178 ~~~~~~~h~~~v~~~~~-~-~~~~l~s~s~dg~v~vwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~la~~~~d~~i~i 253 (347)
....+..|...+.++.| + +++.+++++.|+.|++||.. .....+. ....+.++.+.+++. +++++.|+.|++
T Consensus 134 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~--~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~dg~i~i 209 (313)
T 3odt_A 134 LVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQND--KVIKTFSGIHNDVVRHLAVVDDGH--FISCSNDGLIKL 209 (313)
T ss_dssp EEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETT--EEEEEECSSCSSCEEEEEEEETTE--EEEEETTSEEEE
T ss_pred EEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecC--ceEEEEeccCcccEEEEEEcCCCe--EEEccCCCeEEE
Confidence 34456778889999887 4 78899999999999999943 3344343 345788999976653 788999999999
Q ss_pred EeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeecCCCEEEEcc
Q 036314 254 WDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGG 333 (347)
Q Consensus 254 wd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s 333 (347)
||++.. ..+..+.+|...|.+++|+|++ . |++++.|+.|++||+++++.+..+..|.+.|.++.|+++..+++++
T Consensus 210 ~d~~~~---~~~~~~~~~~~~i~~~~~~~~~-~-l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 284 (313)
T 3odt_A 210 VDMHTG---DVLRTYEGHESFVYCIKLLPNG-D-IVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGDIIVGS 284 (313)
T ss_dssp EETTTC---CEEEEEECCSSCEEEEEECTTS-C-EEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSCEEEEE
T ss_pred EECCch---hhhhhhhcCCceEEEEEEecCC-C-EEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCCEEEEe
Confidence 999753 3577888999999999999998 3 8999999999999999999999999999999999998766688899
Q ss_pred CCceEEEeecc
Q 036314 334 VDSKLCVSSGV 344 (347)
Q Consensus 334 ~D~~v~vw~~~ 344 (347)
.|+.|++|+..
T Consensus 285 ~dg~i~iw~~~ 295 (313)
T 3odt_A 285 SDNLVRIFSQE 295 (313)
T ss_dssp TTSCEEEEESC
T ss_pred CCCcEEEEeCC
Confidence 99999999865
No 29
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=2.9e-39 Score=289.08 Aligned_cols=293 Identities=12% Similarity=0.177 Sum_probs=227.3
Q ss_pred CCCcCCceeeccCCC-CC-EEEEEec---CCeEEEEcCC-CeEEE-EeeccCCceEEEEEeecCCCceEEEEEccCCCcE
Q 036314 20 PSLHDDWVSAVDGSN-PG-FILTGCY---DNLGRVWKAG-GVCTH-ILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTL 92 (347)
Q Consensus 20 ~~~h~~~v~~~~~~~-~~-~l~sg~~---d~~i~iw~~~-~~~~~-~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v 92 (347)
..+|...|.++++++ +. ++++|+. |++|++||.. +.... ...+|...|.+++|+|+.. ++..|++++.||+|
T Consensus 14 ~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~l~~~~~dg~i 92 (357)
T 3i2n_A 14 QKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSL-QQRYLATGDFGGNL 92 (357)
T ss_dssp EEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCT-TTCCEEEEETTSCE
T ss_pred ccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCC-CCceEEEecCCCeE
Confidence 457999999999985 43 5667776 9999999975 44433 3448999999999998531 12369999999999
Q ss_pred EEEeccccccccCccccceeeeeeccccceEEEE------EeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCC
Q 036314 93 RLWKFDAEELVNHPKKIRSFKILRGHKASVHSIA------AETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGN 166 (347)
Q Consensus 93 ~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~------~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~ 166 (347)
++||+..++ .....+.+|...|.+++ |++++++|++++.|++|++||+.....
T Consensus 93 ~iwd~~~~~--------~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~------------- 151 (357)
T 3i2n_A 93 HIWNLEAPE--------MPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDD------------- 151 (357)
T ss_dssp EEECTTSCS--------SCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSS-------------
T ss_pred EEEeCCCCC--------ccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCC-------------
Confidence 999997653 13456789999999995 578999999999999999999876421
Q ss_pred CccccccccccccccccCC----ccceEEEE----e-CCCCeEEEEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCC
Q 036314 167 NQVEEPQLEGEAISTLVGH----TQCVSSVV----W-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGE 237 (347)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~h----~~~v~~~~----~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 237 (347)
.+..+..| ...+.++. | +++..+++++.|+.|++||+++++..........+.++.++|.
T Consensus 152 -----------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~ 220 (357)
T 3i2n_A 152 -----------PVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRK 220 (357)
T ss_dssp -----------CSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCS
T ss_pred -----------cceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCC
Confidence 11222222 23677877 3 5788999999999999999999887655556678899999772
Q ss_pred --CCcEEEEecCCCcEEEEeCCCCCCCCC--eEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCc-------
Q 036314 238 --GSALIAAGGSDPILRIWDPRKPGTSAP--VFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAW------- 306 (347)
Q Consensus 238 --~~~~la~~~~d~~i~iwd~~~~~~~~~--~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~------- 306 (347)
++..+++++.|+.|++||++....... ...+.+|...|.+++|+|++..+|++++.||.|++||++.+.
T Consensus 221 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 300 (357)
T 3i2n_A 221 DISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDS 300 (357)
T ss_dssp SSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCT
T ss_pred CCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccC
Confidence 456888999999999999875322111 113448999999999999987579999999999999998642
Q ss_pred ------------cceeecCCCCeEEEEeecC-CCEEE-EccCCceEEEeeccc
Q 036314 307 ------------PLSVIDSHKDKVLCADWWR-GDSVI-SGGVDSKLCVSSGVS 345 (347)
Q Consensus 307 ------------~~~~~~~h~~~v~~~~~~~-~~~l~-s~s~D~~v~vw~~~~ 345 (347)
.+..+.+|.+.|.+++|+| +++|+ +++.|++|+||+...
T Consensus 301 ~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~ 353 (357)
T 3i2n_A 301 EGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTK 353 (357)
T ss_dssp TSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC
T ss_pred CCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCC
Confidence 3556789999999999985 66787 899999999998653
No 30
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.1e-38 Score=288.96 Aligned_cols=282 Identities=12% Similarity=0.119 Sum_probs=221.1
Q ss_pred CCCcCCceeeccCCC-C-CEEEEEecCCeEEEEcCC-CeEEEEe--eccCCceEEEEEeecCCCceEEEEEccCCCcEEE
Q 036314 20 PSLHDDWVSAVDGSN-P-GFILTGCYDNLGRVWKAG-GVCTHIL--EGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRL 94 (347)
Q Consensus 20 ~~~h~~~v~~~~~~~-~-~~l~sg~~d~~i~iw~~~-~~~~~~l--~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~ 94 (347)
..+|...|+++++++ + .+|++|+.|++|++||.. +.....+ .+|.+.|.+++|+|.+ ...|++++.|++|++
T Consensus 69 ~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~---~~~l~s~~~d~~i~i 145 (383)
T 3ei3_B 69 ASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFN---TNQLFVSSIRGATTL 145 (383)
T ss_dssp ECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTE---EEEEEEEETTTEEEE
T ss_pred ccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCC---CCEEEEEeCCCEEEE
Confidence 468999999999984 4 699999999999999975 4444444 4799999999999842 357999999999999
Q ss_pred EeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccc
Q 036314 95 WKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQL 174 (347)
Q Consensus 95 wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (347)
||+..... ..+....+|...|.+++|+|++++|++|+.|++|++||+..
T Consensus 146 wd~~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~------------------------ 194 (383)
T 3ei3_B 146 RDFSGSVI-------QVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDG------------------------ 194 (383)
T ss_dssp EETTSCEE-------EEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTS------------------------
T ss_pred EECCCCce-------EEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCC------------------------
Confidence 99975321 12222334568899999999999999999999999999842
Q ss_pred cccccccccCCccceEEEEeC-CCC-eEEEEecCCcEEEEECCC----CceeeeeeeCeeeEEEEeeCCCCcEEEEecCC
Q 036314 175 EGEAISTLVGHTQCVSSVVWP-QQE-TIYSASWDHSVRTWDVEM----GKDLSDIFCGKALNCIDIGGEGSALIAAGGSD 248 (347)
Q Consensus 175 ~~~~~~~~~~h~~~v~~~~~~-~~~-~l~s~s~dg~v~vwd~~~----~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d 248 (347)
..+..+.+|...|.+++|. +++ .|++++.|++|++||+++ +..+..+.+...+.++++++.++.+|++++.|
T Consensus 195 --~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d 272 (383)
T 3ei3_B 195 --HEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQR 272 (383)
T ss_dssp --CEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESS
T ss_pred --CEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCC
Confidence 2345677899999999994 566 799999999999999987 45555555566889999987356788999999
Q ss_pred CcEEEEeCCCCCCCCCeEEecCCC-------C----------CeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceee
Q 036314 249 PILRIWDPRKPGTSAPVFQFSSHN-------S----------WISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVI 311 (347)
Q Consensus 249 ~~i~iwd~~~~~~~~~~~~~~~h~-------~----------~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~ 311 (347)
+.|++||++.... ...+.+|. . .+..+.|+|++.. +++.|+.|++||+++++.+..+
T Consensus 273 ~~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~---s~s~d~~i~iwd~~~~~~~~~l 346 (383)
T 3ei3_B 273 NEIRVYSSYDWSK---PDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL---LLNDKRTIDIYDANSGGLVHQL 346 (383)
T ss_dssp SEEEEEETTBTTS---CSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT---CTTCCCCEEEEETTTCCEEEEE
T ss_pred CcEEEEECCCCcc---ccccccccccccccccceEEeccCCCCceEEEecCCccc---ccCCCCeEEEEecCCCceeeee
Confidence 9999999975432 22333332 2 2334666666642 7789999999999999988988
Q ss_pred cC--CCCeEEEEeecC-CCEEEEccCCceEEEeecc
Q 036314 312 DS--HKDKVLCADWWR-GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 312 ~~--h~~~v~~~~~~~-~~~l~s~s~D~~v~vw~~~ 344 (347)
.+ |.+.+.+++|++ +++|++|+ |++|+||+..
T Consensus 347 ~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~ 381 (383)
T 3ei3_B 347 RDPNAAGIISLNKFSPTGDVLASGM-GFNILIWNRE 381 (383)
T ss_dssp CBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC
T ss_pred cCCCCCceEEEEEEecCccEEEEec-CCcEEEEecC
Confidence 87 456777889985 77899987 9999999864
No 31
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=7.4e-39 Score=280.64 Aligned_cols=252 Identities=17% Similarity=0.197 Sum_probs=200.9
Q ss_pred CCCcCCceeeccCC-CCCEEEEEecCCeEEEEcCC---CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEE
Q 036314 20 PSLHDDWVSAVDGS-NPGFILTGCYDNLGRVWKAG---GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLW 95 (347)
Q Consensus 20 ~~~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~---~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~w 95 (347)
..+|.+.|++++|+ ++.+|||||.|++|++|+.. ..+...|.+|.+.|.+++|+++. ++..|+||+.|++|++|
T Consensus 5 ~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~--~g~~l~s~s~D~~v~iW 82 (297)
T 2pm7_B 5 ANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPK--FGTILASCSYDGKVMIW 82 (297)
T ss_dssp CCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGG--GCSEEEEEETTTEEEEE
T ss_pred ccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCC--cCCEEEEEcCCCEEEEE
Confidence 46899999999998 56799999999999999974 25678899999999999997632 12479999999999999
Q ss_pred eccccccccCccccceeeeeeccccceEEEEEeCC--CCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccc
Q 036314 96 KFDAEELVNHPKKIRSFKILRGHKASVHSIAAETS--GNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQ 173 (347)
Q Consensus 96 d~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~--~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (347)
|+.+++. ..+..+.+|..+|.+++|+|+ +.+|++++.|++|++||+.....
T Consensus 83 d~~~~~~-------~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~-------------------- 135 (297)
T 2pm7_B 83 KEENGRW-------SQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGT-------------------- 135 (297)
T ss_dssp EBSSSCB-------CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSC--------------------
T ss_pred EcCCCce-------EEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCc--------------------
Confidence 9976531 234457789999999999998 89999999999999999875311
Q ss_pred ccccccccccCCccceEEEEeCC--------------CCeEEEEecCCcEEEEECCCCc----eeeeee-eCeeeEEEEe
Q 036314 174 LEGEAISTLVGHTQCVSSVVWPQ--------------QETIYSASWDHSVRTWDVEMGK----DLSDIF-CGKALNCIDI 234 (347)
Q Consensus 174 ~~~~~~~~~~~h~~~v~~~~~~~--------------~~~l~s~s~dg~v~vwd~~~~~----~~~~~~-~~~~~~~~~~ 234 (347)
.....+.+|...|.++.|.+ +++|++++.|++|++||++++. ....+. +...+.+++|
T Consensus 136 ---~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~ 212 (297)
T 2pm7_B 136 ---TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAW 212 (297)
T ss_dssp ---BCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEE
T ss_pred ---eeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEE
Confidence 01234567888999999853 3689999999999999998765 233343 2357899999
Q ss_pred eCCC--CcEEEEecCCCcEEEEeCCCCCCCCCeEEe--cCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCC
Q 036314 235 GGEG--SALIAAGGSDPILRIWDPRKPGTSAPVFQF--SSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRT 304 (347)
Q Consensus 235 ~~~~--~~~la~~~~d~~i~iwd~~~~~~~~~~~~~--~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~ 304 (347)
+|++ +.+||+++.|++|++||++..........+ ..|...|.+++|+|++. +||+++.|++|+||+.+.
T Consensus 213 sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 213 SPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGN-VLALSGGDNKVTLWKENL 285 (297)
T ss_dssp CCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSC-CEEEEETTSCEEEEEECT
T ss_pred CCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCC-EEEEEcCCCcEEEEEECC
Confidence 8764 578999999999999998753211112233 56888999999999986 599999999999999863
No 32
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=9.7e-40 Score=296.18 Aligned_cols=266 Identities=21% Similarity=0.327 Sum_probs=217.4
Q ss_pred CeEEEEcCC-CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceE
Q 036314 45 NLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVH 123 (347)
Q Consensus 45 ~~i~iw~~~-~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~ 123 (347)
..+..|+.. ..+.+.|.+|.+.|.+++|+|++. +|+||+.|++|++||+.+++ ....+.+|...|.
T Consensus 46 ~~~~~~~~~~~~~~~~l~gH~~~V~~~~~sp~~~----~l~s~s~D~~v~iWd~~~~~---------~~~~~~~h~~~v~ 112 (380)
T 3iz6_a 46 RTAVSFNPTDLVCCRTLQGHSGKVYSLDWTPEKN----WIVSASQDGRLIVWNALTSQ---------KTHAIKLHCPWVM 112 (380)
T ss_dssp GGCCCCCCCCCEEEEEECCCSSCEEEEEECTTSS----CEEEEETTSEEEEEETTTTE---------EEEEEECCCTTCC
T ss_pred ccccccccceeEEeecccccccEEEEEEEcCCCC----EEEEEeCCCeEEEEECCCCc---------cceEEecCCCCEE
Confidence 345567653 567889999999999999999553 69999999999999987653 4457789999999
Q ss_pred EEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeC-C-CCeEE
Q 036314 124 SIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP-Q-QETIY 201 (347)
Q Consensus 124 ~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~-~~~l~ 201 (347)
+++|+|++++|++|+.|++|++|++........ .......+.+|...+.++.|. + +..|+
T Consensus 113 ~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~------------------~~~~~~~~~gh~~~v~~~~~~~~~~~~l~ 174 (380)
T 3iz6_a 113 ECAFAPNGQSVACGGLDSACSIFNLSSQADRDG------------------NMPVSRVLTGHKGYASSCQYVPDQETRLI 174 (380)
T ss_dssp CCEECTTSSEEEECCSSSCCEEEECCCCSSCCC------------------SSTTCCBCCCCSSCCCCCBCCSSSSSCEE
T ss_pred EEEECCCCCEEEEeeCCCcEEEEECCCCccccC------------------CccceeeccCCCcceEEEEEecCCCCEEE
Confidence 999999999999999999999999875321100 012244678899999888874 3 45699
Q ss_pred EEecCCcEEEEECCCCceeeeee------eCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCe
Q 036314 202 SASWDHSVRTWDVEMGKDLSDIF------CGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWI 275 (347)
Q Consensus 202 s~s~dg~v~vwd~~~~~~~~~~~------~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v 275 (347)
+++.|++|++||+++++.+..+. +...+.++.+.+.++.++++|+.|++|++||++... .....+.+|...|
T Consensus 175 s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~--~~~~~~~~h~~~v 252 (380)
T 3iz6_a 175 TGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITS--RAVRTYHGHEGDI 252 (380)
T ss_dssp EECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTC--CCCEEECCCSSCC
T ss_pred EECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCC--cceEEECCcCCCe
Confidence 99999999999999988776542 234678888887778899999999999999997432 3467888999999
Q ss_pred eEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCC-------CeEEEEeecC-CCEEEEccCCceEEEeecc
Q 036314 276 SACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHK-------DKVLCADWWR-GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 276 ~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~-------~~v~~~~~~~-~~~l~s~s~D~~v~vw~~~ 344 (347)
.+++|+|++. +|++|+.|++|++||+++++.+..+..|. ..|.+++|+| |.+|++|+.|++|+||+..
T Consensus 253 ~~v~~~p~~~-~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~ 328 (380)
T 3iz6_a 253 NSVKFFPDGQ-RFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTL 328 (380)
T ss_dssp CEEEECTTSS-EEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETT
T ss_pred EEEEEecCCC-eEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECC
Confidence 9999999986 59999999999999999998887775543 2488999985 7789999999999999853
No 33
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=5.3e-38 Score=278.43 Aligned_cols=279 Identities=19% Similarity=0.284 Sum_probs=233.9
Q ss_pred CCcCCceeeccCCC-CCEEEEEecCCeEEEEcCCC-e---EEEEee--ccCCceEEEEEeecCCCceEEEEEccCCCcEE
Q 036314 21 SLHDDWVSAVDGSN-PGFILTGCYDNLGRVWKAGG-V---CTHILE--GHCGAVSSVNIIKSDGLKYVTVATASKDQTLR 93 (347)
Q Consensus 21 ~~h~~~v~~~~~~~-~~~l~sg~~d~~i~iw~~~~-~---~~~~l~--~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~ 93 (347)
.+|...|+++++++ +.+|++++ |+.|++|+... . ....+. +|...|.+++|+|++ ..|++++.|++|+
T Consensus 48 ~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----~~l~~~~~d~~i~ 122 (337)
T 1gxr_A 48 LNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDG----CTLIVGGEASTLS 122 (337)
T ss_dssp ECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTS----SEEEEEESSSEEE
T ss_pred ccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCC----CEEEEEcCCCcEE
Confidence 37999999999984 56899988 99999999742 1 223333 899999999999854 3689999999999
Q ss_pred EEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccc
Q 036314 94 LWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQ 173 (347)
Q Consensus 94 ~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (347)
+||+..++. .....+.+|...|.+++|+|+++++++++.|+.|++||+.+.
T Consensus 123 ~~d~~~~~~-------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~---------------------- 173 (337)
T 1gxr_A 123 IWDLAAPTP-------RIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ---------------------- 173 (337)
T ss_dssp EEECCCC---------EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT----------------------
T ss_pred EEECCCCCc-------ceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCC----------------------
Confidence 999976531 234567789999999999999999999999999999998753
Q ss_pred ccccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEE
Q 036314 174 LEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILR 252 (347)
Q Consensus 174 ~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~ 252 (347)
+.+..+.+|...+.++.| ++++.|++++.|+.|++||+++++.+..+.....+.+++++++ +..+++++.|+.|+
T Consensus 174 ---~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~~~~i~ 249 (337)
T 1gxr_A 174 ---TLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPT-GEWLAVGMESSNVE 249 (337)
T ss_dssp ---EEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTT-SSEEEEEETTSCEE
T ss_pred ---ceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCCCceEEEEECCC-CCEEEEEcCCCcEE
Confidence 234566778899999998 5778999999999999999999988777776778899999765 46788899999999
Q ss_pred EEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeecC-CCEEEE
Q 036314 253 IWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVIS 331 (347)
Q Consensus 253 iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s 331 (347)
+||++.. ....+..|...|.+++|+|++. +|++++.|+.|++||+++++.+.. ..|...|.++.|++ +++|++
T Consensus 250 ~~~~~~~----~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~ 323 (337)
T 1gxr_A 250 VLHVNKP----DKYQLHLHESCVLSLKFAYCGK-WFVSTGKDNLLNAWRTPYGASIFQ-SKESSSVLSCDISVDDKYIVT 323 (337)
T ss_dssp EEETTSS----CEEEECCCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTCCEEEE-EECSSCEEEEEECTTSCEEEE
T ss_pred EEECCCC----CeEEEcCCccceeEEEECCCCC-EEEEecCCCcEEEEECCCCeEEEE-ecCCCcEEEEEECCCCCEEEE
Confidence 9999753 2457788999999999999986 599999999999999998876644 45888999999985 678999
Q ss_pred ccCCceEEEeec
Q 036314 332 GGVDSKLCVSSG 343 (347)
Q Consensus 332 ~s~D~~v~vw~~ 343 (347)
++.|++|++|+.
T Consensus 324 ~~~dg~i~iw~~ 335 (337)
T 1gxr_A 324 GSGDKKATVYEV 335 (337)
T ss_dssp EETTSCEEEEEE
T ss_pred ecCCCeEEEEEE
Confidence 999999999984
No 34
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-39 Score=297.56 Aligned_cols=294 Identities=16% Similarity=0.214 Sum_probs=233.1
Q ss_pred CCCcCCceeeccCC-CCCEEEEEecCCeEEEEcCCC-----eEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEE
Q 036314 20 PSLHDDWVSAVDGS-NPGFILTGCYDNLGRVWKAGG-----VCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLR 93 (347)
Q Consensus 20 ~~~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~~-----~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~ 93 (347)
...|...|++++++ ++.+|++|+.|++|++|+... .....+.+|.+.|.+++|+|+++ ..|++++.|++|+
T Consensus 63 ~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~---~~l~s~~~dg~v~ 139 (416)
T 2pm9_A 63 SLQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQD---NVLASGGNNGEIF 139 (416)
T ss_dssp CCCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSST---TBEEEECSSSCEE
T ss_pred EEecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCC---CEEEEEcCCCeEE
Confidence 34689999999998 567999999999999999754 47888999999999999998633 3699999999999
Q ss_pred EEeccccccccCccccceeeeeeccccceEEEEEeCC-CCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccc
Q 036314 94 LWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETS-GNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEP 172 (347)
Q Consensus 94 ~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~-~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (347)
+||+..++.............+.+|...|.+++|+|+ +.++++++.|++|++||+.....
T Consensus 140 iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~------------------- 200 (416)
T 2pm9_A 140 IWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKE------------------- 200 (416)
T ss_dssp BCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEE-------------------
T ss_pred EEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCc-------------------
Confidence 9999866411000011122234679999999999999 78999999999999999876421
Q ss_pred cccccccccc------cCCccceEEEEeC-CC-CeEEEEecCC---cEEEEECCCC-ceeeeee--eCeeeEEEEeeCCC
Q 036314 173 QLEGEAISTL------VGHTQCVSSVVWP-QQ-ETIYSASWDH---SVRTWDVEMG-KDLSDIF--CGKALNCIDIGGEG 238 (347)
Q Consensus 173 ~~~~~~~~~~------~~h~~~v~~~~~~-~~-~~l~s~s~dg---~v~vwd~~~~-~~~~~~~--~~~~~~~~~~~~~~ 238 (347)
+..+ .+|...+.+++|. ++ ..+++++.|+ .|++||++++ .....+. +...+.++++++.+
T Consensus 201 ------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 274 (416)
T 2pm9_A 201 ------VIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQD 274 (416)
T ss_dssp ------EEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSC
T ss_pred ------ceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCC
Confidence 1222 2347889999985 44 5799999999 9999999986 4445554 34578999998756
Q ss_pred CcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecC-----
Q 036314 239 SALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDS----- 313 (347)
Q Consensus 239 ~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~----- 313 (347)
+.++++++.|+.|++||++.. .++..+.+|...|.+++|+|++..+|++++.|+.|++||++++........
T Consensus 275 ~~~l~s~~~dg~v~~wd~~~~---~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~ 351 (416)
T 2pm9_A 275 EHLLLSSGRDNTVLLWNPESA---EQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQ 351 (416)
T ss_dssp SSCEEEEESSSEEEEECSSSC---CEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC-------
T ss_pred CCeEEEEeCCCCEEEeeCCCC---ccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccc
Confidence 778899999999999998753 357788899999999999999856799999999999999987654332211
Q ss_pred ------------------------------CCCeEEEEeecC-CCEEEEccCCceEEEeecc
Q 036314 314 ------------------------------HKDKVLCADWWR-GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 314 ------------------------------h~~~v~~~~~~~-~~~l~s~s~D~~v~vw~~~ 344 (347)
|...+.+++|++ |++||+++.|++|+||+..
T Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~ 413 (416)
T 2pm9_A 352 QESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNPK 413 (416)
T ss_dssp ---------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCCC
T ss_pred cCCcccccccccccccccccccccccCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEec
Confidence 667788999985 6679999999999999864
No 35
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8e-40 Score=307.23 Aligned_cols=276 Identities=11% Similarity=0.044 Sum_probs=203.8
Q ss_pred EEEEecCCeEEEEcCC-CeE----EEEeeccCCceEEEEEeecCC--CceEEEEEccCCCcEEEEeccccccccC--ccc
Q 036314 38 ILTGCYDNLGRVWKAG-GVC----THILEGHCGAVSSVNIIKSDG--LKYVTVATASKDQTLRLWKFDAEELVNH--PKK 108 (347)
Q Consensus 38 l~sg~~d~~i~iw~~~-~~~----~~~l~~h~~~V~~v~~~~~~~--~~~~~l~s~s~Dg~v~~wd~~~~~~~~~--~~~ 108 (347)
|+|++.|++|+||+.. +.+ ...+.+|.+.|.+++|+|... .++.+||+++.||+|++||+..++.... ...
T Consensus 176 laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~ 255 (524)
T 2j04_B 176 FDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMC 255 (524)
T ss_dssp ------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECC
T ss_pred hccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceee
Confidence 3446688999999964 322 245778899999999998521 1234799999999999999976532100 001
Q ss_pred cceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccc
Q 036314 109 IRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQC 188 (347)
Q Consensus 109 ~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 188 (347)
.++...+.+|..+|.+++|+++ ..|++|+.||+|++||++++. .....+.+|...
T Consensus 256 ~~p~~~l~~h~~~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~------------------------~~~~~~~~H~~~ 310 (524)
T 2j04_B 256 EKPSLTLSLADSLITTFDFLSP-TTVVCGFKNGFVAEFDLTDPE------------------------VPSFYDQVHDSY 310 (524)
T ss_dssp CSCSEEECCTTTCEEEEEESSS-SEEEEEETTSEEEEEETTBCS------------------------SCSEEEECSSSC
T ss_pred cCceEEEEcCCCCEEEEEecCC-CeEEEEeCCCEEEEEECCCCC------------------------CceEEeeccccc
Confidence 1234467899999999999986 489999999999999987531 123356789999
Q ss_pred eEEE--EeCC-C-CeEEEEecCCcEEEEECCCCceeeeeeeCe---eeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCC
Q 036314 189 VSSV--VWPQ-Q-ETIYSASWDHSVRTWDVEMGKDLSDIFCGK---ALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGT 261 (347)
Q Consensus 189 v~~~--~~~~-~-~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~---~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~ 261 (347)
|.++ +|++ + ..|+|+|.|++|+|||+++++.+..+.... .+.+++|+|++ ..+++++.|++|++||++..
T Consensus 311 V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~-~~l~s~~~d~tv~lwd~~~~-- 387 (524)
T 2j04_B 311 ILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQI-YSYIYSDGASSLRAVPSRAA-- 387 (524)
T ss_dssp EEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTT-TEEEEECSSSEEEEEETTCT--
T ss_pred EEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCc-CeEEEeCCCCcEEEEECccc--
Confidence 9999 4654 4 689999999999999999877665554321 36788998754 46888999999999999853
Q ss_pred CCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCC------------------------------------
Q 036314 262 SAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTA------------------------------------ 305 (347)
Q Consensus 262 ~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~------------------------------------ 305 (347)
.....+.+|.+.|.+++|+|++. +|++|+.|++|++||+...
T Consensus 388 -~~~~~l~gH~~~V~sva~Sp~g~-~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~ 465 (524)
T 2j04_B 388 -FAVHPLVSRETTITAIGVSRLHP-MVLAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYE 465 (524)
T ss_dssp -TCCEEEEECSSCEEEEECCSSCC-BCEEEETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCCC
T ss_pred -ccceeeecCCCceEEEEeCCCCC-eEEEEECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEccCCce
Confidence 23467789999999999999986 5999999999999975321
Q ss_pred --------ccceeecCCCCeEEEEeecCC----CEEEEccCCceEEEeec
Q 036314 306 --------WPLSVIDSHKDKVLCADWWRG----DSVISGGVDSKLCVSSG 343 (347)
Q Consensus 306 --------~~~~~~~~h~~~v~~~~~~~~----~~l~s~s~D~~v~vw~~ 343 (347)
..+.++.+|.+.|.+|+|+|. ..+|+|+.||+|+||..
T Consensus 466 ~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l 515 (524)
T 2j04_B 466 VYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYL 515 (524)
T ss_dssp CCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEEC
T ss_pred ecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEc
Confidence 112234578899999999863 37999999999999974
No 36
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.6e-39 Score=295.73 Aligned_cols=293 Identities=17% Similarity=0.272 Sum_probs=236.4
Q ss_pred cCCceeeccCCC-CC-EEEEE----------ecCCeEEEEcCCC-e---EEEEeeccCCceEEEEEeecCCCceEEEEEc
Q 036314 23 HDDWVSAVDGSN-PG-FILTG----------CYDNLGRVWKAGG-V---CTHILEGHCGAVSSVNIIKSDGLKYVTVATA 86 (347)
Q Consensus 23 h~~~v~~~~~~~-~~-~l~sg----------~~d~~i~iw~~~~-~---~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~ 86 (347)
+...|.++++++ +. +|++| +.|++|++||... . .... ..|...|.+++|+|++. .|+++
T Consensus 11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~----~l~~~ 85 (416)
T 2pm9_A 11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIAS-LQVDSKFNDLDWSHNNK----IIAGA 85 (416)
T ss_dssp EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCC-CCCSSCEEEEEECSSSS----CEEEE
T ss_pred hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEE-EecCCceEEEEECCCCC----eEEEE
Confidence 445788999985 44 89999 8999999999753 2 2222 36889999999998543 68999
Q ss_pred cCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCC-CCEEEEeeCCCcEEEEecCCCCCCCccceeeeccC
Q 036314 87 SKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETS-GNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKG 165 (347)
Q Consensus 87 s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~-~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~ 165 (347)
+.||+|++|++.... ...+....+.+|..+|.+++|+|+ +++|++++.|++|++||+.+........
T Consensus 86 ~~dg~v~vw~~~~~~-----~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~------- 153 (416)
T 2pm9_A 86 LDNGSLELYSTNEAN-----NAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNY------- 153 (416)
T ss_dssp ESSSCEEEECCSSTT-----SCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTC-------
T ss_pred ccCCeEEEeeccccc-----ccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccc-------
Confidence 999999999987521 011255678899999999999998 8999999999999999997653110000
Q ss_pred CCccccccccccccccccCCccceEEEEeC-C-CCeEEEEecCCcEEEEECCCCceeeeeee-------CeeeEEEEeeC
Q 036314 166 NNQVEEPQLEGEAISTLVGHTQCVSSVVWP-Q-QETIYSASWDHSVRTWDVEMGKDLSDIFC-------GKALNCIDIGG 236 (347)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~-~~~l~s~s~dg~v~vwd~~~~~~~~~~~~-------~~~~~~~~~~~ 236 (347)
.......+.+|...|.++.|. + +..|++++.|+.|++||+++++.+..+.. ...+.++++++
T Consensus 154 ---------~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 224 (416)
T 2pm9_A 154 ---------TPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHP 224 (416)
T ss_dssp ---------CCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECS
T ss_pred ---------cccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECC
Confidence 000122346788899999985 4 57899999999999999999887776654 45689999988
Q ss_pred CCCcEEEEecCCC---cEEEEeCCCCCCCCCeEEec-CCCCCeeEEEeCC-CCCeEEEEEeCCCcEEEEEcCCCccceee
Q 036314 237 EGSALIAAGGSDP---ILRIWDPRKPGTSAPVFQFS-SHNSWISACKWHN-KSWFHLISASYDGKVMLWDLRTAWPLSVI 311 (347)
Q Consensus 237 ~~~~~la~~~~d~---~i~iwd~~~~~~~~~~~~~~-~h~~~v~~v~~s~-~~~~~l~s~s~D~~i~lwd~~~~~~~~~~ 311 (347)
++..++++++.|+ .|++||++... .+...+. +|...|.+++|+| ++ .+|++++.|++|++||+++++++..+
T Consensus 225 ~~~~~l~~~~~d~~~~~i~~~d~~~~~--~~~~~~~~~~~~~v~~~~~s~~~~-~~l~s~~~dg~v~~wd~~~~~~~~~~ 301 (416)
T 2pm9_A 225 KNSTRVATATGSDNDPSILIWDLRNAN--TPLQTLNQGHQKGILSLDWCHQDE-HLLLSSGRDNTVLLWNPESAEQLSQF 301 (416)
T ss_dssp SCTTEEEEEECCSSSCCCCEEETTSTT--SCSBCCCSCCSSCEEEEEECSSCS-SCEEEEESSSEEEEECSSSCCEEEEE
T ss_pred CCCCEEEEEECCCCCceEEEEeCCCCC--CCcEEeecCccCceeEEEeCCCCC-CeEEEEeCCCCEEEeeCCCCccceee
Confidence 8777899999998 99999998642 2355677 8999999999999 55 56999999999999999999999999
Q ss_pred cCCCCeEEEEeecC-C-CEEEEccCCceEEEeecc
Q 036314 312 DSHKDKVLCADWWR-G-DSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 312 ~~h~~~v~~~~~~~-~-~~l~s~s~D~~v~vw~~~ 344 (347)
.+|.+.|.+++|+| + .+|++++.|++|+||+..
T Consensus 302 ~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~ 336 (416)
T 2pm9_A 302 PARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQ 336 (416)
T ss_dssp ECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESC
T ss_pred cCCCCceEEEEECCCCCCEEEEEecCCcEEEEEcc
Confidence 99999999999986 4 689999999999999975
No 37
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=7.8e-39 Score=287.79 Aligned_cols=281 Identities=15% Similarity=0.184 Sum_probs=198.6
Q ss_pred eccCCCCCEEEEEecCCeEEEEcCCCeEEEEeeccCCceEEEEEeecCCCceEEEEEccC------CCcEEEEecccccc
Q 036314 29 AVDGSNPGFILTGCYDNLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASK------DQTLRLWKFDAEEL 102 (347)
Q Consensus 29 ~~~~~~~~~l~sg~~d~~i~iw~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~------Dg~v~~wd~~~~~~ 102 (347)
.+++...+++++++.+...+.|+++. ....+|+..|.+++|+|++ .+|++||. |++|++|+...+..
T Consensus 10 g~d~g~~~~~~~~~g~~~~~~w~~p~---~~p~~H~~~V~~v~fSpDG----~~las~s~d~~~~wd~~v~~~~~~~~~~ 82 (357)
T 4g56_B 10 GVDLGTENLYFQSNGSSKGSAWGRPV---TAPACMEVQIGAVRYRRDG----ALLLAASSLSSRTWGGSIWVFKDPEGAP 82 (357)
T ss_dssp ---------------------------------CCCSEEEEEEECSSS----CEEEEEECSSSSSCCEEEEEESSCC---
T ss_pred CCCCCccceEEecCCCccccccCCCC---CCcccccCCEEEEEECCCC----CEEEEEcCCCCccccCeEEEEECCCCCc
Confidence 34444445556666678889998642 2345799999999999954 47999998 77899998765532
Q ss_pred ccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccc
Q 036314 103 VNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTL 182 (347)
Q Consensus 103 ~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (347)
. ........+|...|.+++|+|++. +++++.||+|+|||+.++.... ......
T Consensus 83 ~-----~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~---------------------~~~~~~ 135 (357)
T 4g56_B 83 N-----ESLCTAGVQTEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESLL---------------------VNKFAK 135 (357)
T ss_dssp C-----GGGCSEEEECSSCEEEEEEETTTE-EEEEETTSCEEEC--------C---------------------CCCEEE
T ss_pred c-----eeEecccCCCCCCEEEEEEcCCCC-EEEEECCCEEEEeeccccceeE---------------------EEeecc
Confidence 1 112234557999999999999986 4568899999999987643210 011234
Q ss_pred cCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeeee-CeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCC
Q 036314 183 VGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFC-GKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPG 260 (347)
Q Consensus 183 ~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~ 260 (347)
.+|+..|.+++| |++++|++++.|++|++||+++++.+..+.. ...+.++++++++..++++++.|+.|++||++.+.
T Consensus 136 ~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~ 215 (357)
T 4g56_B 136 YEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPK 215 (357)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSS
T ss_pred CCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCc
Confidence 579999999998 5788999999999999999999988777754 45789999988777788999999999999998643
Q ss_pred CCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeecC-C-CEEEEccCCceE
Q 036314 261 TSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-G-DSVISGGVDSKL 338 (347)
Q Consensus 261 ~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~-~-~~l~s~s~D~~v 338 (347)
......+..|...+.+++|+|++..+|++|+.|+.|++||+++++.+.++.+|.+.|.+++|+| + ++||+|+.|++|
T Consensus 216 -~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i 294 (357)
T 4g56_B 216 -PATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTV 294 (357)
T ss_dssp -CBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCE
T ss_pred -eeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEE
Confidence 2233445567788999999999877899999999999999999999999999999999999985 4 469999999999
Q ss_pred EEeecc
Q 036314 339 CVSSGV 344 (347)
Q Consensus 339 ~vw~~~ 344 (347)
+||+..
T Consensus 295 ~iwd~~ 300 (357)
T 4g56_B 295 AVLDAD 300 (357)
T ss_dssp EEECTT
T ss_pred EEEECC
Confidence 999865
No 38
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=3.2e-39 Score=285.53 Aligned_cols=253 Identities=20% Similarity=0.332 Sum_probs=194.4
Q ss_pred EEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeC--CCCEEE
Q 036314 58 HILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAET--SGNMVC 135 (347)
Q Consensus 58 ~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~--~~~~l~ 135 (347)
..+.+|.+.|.+++|++++ .+|++|+.|++|++||+.+++. ..+..+.+|..+|.+++|++ ++++|+
T Consensus 7 ~~~~~H~~~V~~v~~s~~g----~~lasgs~D~~v~lwd~~~~~~-------~~~~~l~gH~~~V~~v~~~~~~~~~~l~ 75 (316)
T 3bg1_A 7 TVDTSHEDMIHDAQMDYYG----TRLATCSSDRSVKIFDVRNGGQ-------ILIADLRGHEGPVWQVAWAHPMYGNILA 75 (316)
T ss_dssp -------CCEEEEEECGGG----CEEEEEETTTEEEEEEEETTEE-------EEEEEEECCSSCEEEEEECCGGGSSCEE
T ss_pred eecccccCeEEEeeEcCCC----CEEEEEeCCCeEEEEEecCCCc-------EEEEEEcCCCccEEEEEeCCCCCCCEEE
Confidence 3577999999999999844 4799999999999999875431 24567889999999999975 489999
Q ss_pred EeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeC-C--CCeEEEEecCCcEEEE
Q 036314 136 SGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP-Q--QETIYSASWDHSVRTW 212 (347)
Q Consensus 136 sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~--~~~l~s~s~dg~v~vw 212 (347)
||+.|++|++||++++.. .....+.+|...|.+++|. + +..|++++.|++|++|
T Consensus 76 s~s~D~~v~iWd~~~~~~-----------------------~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lw 132 (316)
T 3bg1_A 76 SCSYDRKVIIWREENGTW-----------------------EKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLL 132 (316)
T ss_dssp EEETTSCEEEECCSSSCC-----------------------CEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEE
T ss_pred EEECCCEEEEEECCCCcc-----------------------eEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEE
Confidence 999999999999865311 1234567899999999994 3 5689999999999999
Q ss_pred ECCCCcee---eeee-eCeeeEEEEeeCCC----------------CcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCC
Q 036314 213 DVEMGKDL---SDIF-CGKALNCIDIGGEG----------------SALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHN 272 (347)
Q Consensus 213 d~~~~~~~---~~~~-~~~~~~~~~~~~~~----------------~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~ 272 (347)
|++.+... ..+. +...+.++.++|+. ..+|++|+.|++|++||++......+...+.+|.
T Consensus 133 d~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~ 212 (316)
T 3bg1_A 133 TYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHS 212 (316)
T ss_dssp EECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCS
T ss_pred ecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCC
Confidence 99875322 1111 22356677776542 3578999999999999986432223456788999
Q ss_pred CCeeEEEeCCCC---CeEEEEEeCCCcEEEEEcCCCc----cceeecCCCCeEEEEeecC-CCEEEEccCCceEEEeecc
Q 036314 273 SWISACKWHNKS---WFHLISASYDGKVMLWDLRTAW----PLSVIDSHKDKVLCADWWR-GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 273 ~~v~~v~~s~~~---~~~l~s~s~D~~i~lwd~~~~~----~~~~~~~h~~~v~~~~~~~-~~~l~s~s~D~~v~vw~~~ 344 (347)
++|.+++|+|++ ..+||+|+.|++|+|||+++.. ....+..|.+.|++++|+| +++||+++.|++|+||+..
T Consensus 213 ~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 213 DWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp SCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred CceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 999999999986 2479999999999999998631 2345677899999999986 7789999999999999853
No 39
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=6e-38 Score=289.34 Aligned_cols=274 Identities=24% Similarity=0.424 Sum_probs=230.6
Q ss_pred CCCcCCceeeccCCCCCEEEEEecCCeEEEEcCC-CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEecc
Q 036314 20 PSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFD 98 (347)
Q Consensus 20 ~~~h~~~v~~~~~~~~~~l~sg~~d~~i~iw~~~-~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~ 98 (347)
..+|...|.++++ ++++|++|+.||+|++||.. +.+...+.+|.+.|.++.|. + ..|++|+.||+|++||+.
T Consensus 129 ~~~~~~~v~~~~~-d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~----~~l~sg~~dg~i~vwd~~ 201 (435)
T 1p22_A 129 RSETSKGVYCLQY-DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYD--E----RVIITGSSDSTVRVWDVN 201 (435)
T ss_dssp CCSSCCCEEEEEC-CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEECC--S----SEEEEEETTSCEEEEESS
T ss_pred ccCCCCcEEEEEE-CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEEC--C----CEEEEEcCCCeEEEEECC
Confidence 4467888999998 67899999999999999974 67888999999999999882 2 379999999999999998
Q ss_pred ccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccc
Q 036314 99 AEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEA 178 (347)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (347)
+++ ....+.+|...|.+++|+ +..+++|+.|++|++||+.+.... ..
T Consensus 202 ~~~---------~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~----------------------~~ 248 (435)
T 1p22_A 202 TGE---------MLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDI----------------------TL 248 (435)
T ss_dssp SCC---------EEEEECCCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCC----------------------EE
T ss_pred CCc---------EEEEEcCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCc----------------------ee
Confidence 764 456778999999999996 459999999999999998754210 11
Q ss_pred cccccCCccceEEEEeCCCCeEEEEecCCcEEEEECCCCceeeeeee-CeeeEEEEeeCCCCcEEEEecCCCcEEEEeCC
Q 036314 179 ISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFC-GKALNCIDIGGEGSALIAAGGSDPILRIWDPR 257 (347)
Q Consensus 179 ~~~~~~h~~~v~~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~ 257 (347)
...+.+|...|.++.| +++.+++++.||+|++||+++++.+..+.. ...+.++.+. +..+++|+.|+.|++||++
T Consensus 249 ~~~~~~~~~~v~~~~~-~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~g~~dg~i~iwd~~ 324 (435)
T 1p22_A 249 RRVLVGHRAAVNVVDF-DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIE 324 (435)
T ss_dssp EEEECCCSSCEEEEEE-ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE---TTEEEEEETTSCEEEEETT
T ss_pred eeEecCCCCcEEEEEe-CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC---CCEEEEEeCCCeEEEEECC
Confidence 2456789999999998 778999999999999999999988877764 3467888874 3588999999999999997
Q ss_pred CCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCc---------cceeecCCCCeEEEEeecCCCE
Q 036314 258 KPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAW---------PLSVIDSHKDKVLCADWWRGDS 328 (347)
Q Consensus 258 ~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~---------~~~~~~~h~~~v~~~~~~~~~~ 328 (347)
.. ..+..+.+|...|.+++|+ + .+|++|+.||.|++||++++. .+..+.+|.+.|.+++| ++.+
T Consensus 325 ~~---~~~~~~~~h~~~v~~~~~~--~-~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~-~~~~ 397 (435)
T 1p22_A 325 CG---ACLRVLEGHEELVRCIRFD--N-KRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF-DEFQ 397 (435)
T ss_dssp TC---CEEEEECCCSSCEEEEECC--S-SEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE-CSSC
T ss_pred CC---CEEEEEeCCcCcEEEEEec--C-CEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe-CCCE
Confidence 53 3477889999999999993 3 369999999999999997665 57788999999999999 7888
Q ss_pred EEEccCCceEEEeecc
Q 036314 329 VISGGVDSKLCVSSGV 344 (347)
Q Consensus 329 l~s~s~D~~v~vw~~~ 344 (347)
|++++.||+|++|+..
T Consensus 398 l~s~s~Dg~i~iwd~~ 413 (435)
T 1p22_A 398 IVSSSHDDTILIWDFL 413 (435)
T ss_dssp EEECCSSSEEEEEC--
T ss_pred EEEEeCCCEEEEEECC
Confidence 9999999999999864
No 40
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.2e-38 Score=291.92 Aligned_cols=278 Identities=14% Similarity=0.174 Sum_probs=220.3
Q ss_pred CceeeccCC-CCCEEEEEecCCeEEEEcCCC-eEEEEeeccCCceEEE-EEeecCCCceEEEEEccCCCcEEEEeccccc
Q 036314 25 DWVSAVDGS-NPGFILTGCYDNLGRVWKAGG-VCTHILEGHCGAVSSV-NIIKSDGLKYVTVATASKDQTLRLWKFDAEE 101 (347)
Q Consensus 25 ~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~~-~~~~~l~~h~~~V~~v-~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~ 101 (347)
..++.++|+ ++.+|++|+.|+++++||... .....+.+| .+..+ .|++++ ..|++++.||+|++||+..++
T Consensus 57 ~~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~--~~~~~~~~~~~~----~~l~~~~~dg~i~iwd~~~~~ 130 (420)
T 3vl1_A 57 DAGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA--DYTAVDTAKLQM----RRFILGTTEGDIKVLDSNFNL 130 (420)
T ss_dssp BCCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSC--CEEEEEEECSSS----CEEEEEETTSCEEEECTTSCE
T ss_pred ccccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecC--CceEEEEEecCC----CEEEEEECCCCEEEEeCCCcc
Confidence 445578887 567999999999999999754 333345555 34444 455533 479999999999999987653
Q ss_pred cccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccccccccc
Q 036314 102 LVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAIST 181 (347)
Q Consensus 102 ~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (347)
....+.+|..+|.+++|+|++++|++|+.|++|++||+.+. +.+..
T Consensus 131 ---------~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~-------------------------~~~~~ 176 (420)
T 3vl1_A 131 ---------QREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDG-------------------------SNPRT 176 (420)
T ss_dssp ---------EEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC-------------------------CCCEE
T ss_pred ---------eeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCC-------------------------cCceE
Confidence 34456789999999999999999999999999999998754 23456
Q ss_pred ccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeeee----CeeeEEEEee--------------------C
Q 036314 182 LVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFC----GKALNCIDIG--------------------G 236 (347)
Q Consensus 182 ~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~----~~~~~~~~~~--------------------~ 236 (347)
+.+|...|.+++| |+++.|++++.|++|++||+++++.+..+.. ...+.++.+. .
T Consensus 177 ~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s 256 (420)
T 3vl1_A 177 LIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFG 256 (420)
T ss_dssp EECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSS
T ss_pred EcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEc
Confidence 7789999999998 6788999999999999999999887776643 1234444432 2
Q ss_pred CCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCcc-ceeecC-C
Q 036314 237 EGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWP-LSVIDS-H 314 (347)
Q Consensus 237 ~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~-~~~~~~-h 314 (347)
+++.++++++.|+.|++||++.... ......+|...|.+++|+|++..+|++|+.||.|++||+++++. +..+.+ |
T Consensus 257 ~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~ 334 (420)
T 3vl1_A 257 TYGKYVIAGHVSGVITVHNVFSKEQ--TIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINE 334 (420)
T ss_dssp CTTEEEEEEETTSCEEEEETTTCCE--EEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEEST
T ss_pred CCCCEEEEEcCCCeEEEEECCCCce--eEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccC
Confidence 3556889999999999999975321 22333568889999999999975799999999999999998744 677776 6
Q ss_pred CCeEEEEeecCCCEEEEccCCceEEEeecc
Q 036314 315 KDKVLCADWWRGDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 315 ~~~v~~~~~~~~~~l~s~s~D~~v~vw~~~ 344 (347)
...|.++.|+++++|++++.|++|++|+..
T Consensus 335 ~~~v~~~~~~~~~~l~s~~~d~~v~iw~~~ 364 (420)
T 3vl1_A 335 GTPINNVYFAAGALFVSSGFDTSIKLDIIS 364 (420)
T ss_dssp TSCEEEEEEETTEEEEEETTTEEEEEEEEC
T ss_pred CCCceEEEeCCCCEEEEecCCccEEEEecc
Confidence 778888888888899999999999999854
No 41
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.4e-37 Score=276.50 Aligned_cols=291 Identities=14% Similarity=0.189 Sum_probs=237.0
Q ss_pred CCCcCCceeeccCC-CCCEEEEEecCCeEEEEcC-CCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEec
Q 036314 20 PSLHDDWVSAVDGS-NPGFILTGCYDNLGRVWKA-GGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKF 97 (347)
Q Consensus 20 ~~~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~-~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~ 97 (347)
..+|++.|++++++ ++.+|++|+.|+.|++||. .+..+..+.+|.+.|.+++|+|++ ..|++++.||+|++||+
T Consensus 28 l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~----~~l~s~~~dg~i~iwd~ 103 (369)
T 3zwl_B 28 LTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFT----KYCVTGSADYSIKLWDV 103 (369)
T ss_dssp EECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTS----SEEEEEETTTEEEEEET
T ss_pred EEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCC----CEEEEEeCCCeEEEEEC
Confidence 45899999999998 4679999999999999996 467888999999999999999844 37999999999999999
Q ss_pred cccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCC-----CcEEEEecCCCCCCCccceeeeccCCCccccc
Q 036314 98 DAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWD-----CTISLWRTNDSDAAGNQVSIKKRKGNNQVEEP 172 (347)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~D-----g~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (347)
.+++ ....+. |..+|.+++|+|+++++++++.+ +.|++||+..........
T Consensus 104 ~~~~---------~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~-------------- 159 (369)
T 3zwl_B 104 SNGQ---------CVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELT-------------- 159 (369)
T ss_dssp TTCC---------EEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEE--------------
T ss_pred CCCc---------EEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeec--------------
Confidence 8764 333444 88899999999999999999999 999999987543221110
Q ss_pred cccccccccccCCcc--ceEEEEe-CCCCeEEEEecCCcEEEEECCC-Cceeeeeee-CeeeEEEEeeCCCCcEEEEecC
Q 036314 173 QLEGEAISTLVGHTQ--CVSSVVW-PQQETIYSASWDHSVRTWDVEM-GKDLSDIFC-GKALNCIDIGGEGSALIAAGGS 247 (347)
Q Consensus 173 ~~~~~~~~~~~~h~~--~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~la~~~~ 247 (347)
.........+..|.. .+.++.| ++++.|++++.||.|++||+++ ...+..+.. ...+.+++++++ +..|++++.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~ 238 (369)
T 3zwl_B 160 KVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPD-LTYFITSSR 238 (369)
T ss_dssp EECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTT-SSEEEEEET
T ss_pred ccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCC-CCEEEEecC
Confidence 001122334455655 8899988 5778899999999999999998 555555543 457889999765 567889999
Q ss_pred CCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCC--------------cEEEEEcCCCccceeecC
Q 036314 248 DPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDG--------------KVMLWDLRTAWPLSVIDS 313 (347)
Q Consensus 248 d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~--------------~i~lwd~~~~~~~~~~~~ 313 (347)
|+.|++||++.. .....+. +...+.++.|+|++. ++++++.++ .+++||..+++.+..+.+
T Consensus 239 d~~i~v~d~~~~---~~~~~~~-~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~ 313 (369)
T 3zwl_B 239 DTNSFLVDVSTL---QVLKKYE-TDCPLNTAVITPLKE-FIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQG 313 (369)
T ss_dssp TSEEEEEETTTC---CEEEEEE-CSSCEEEEEECSSSS-EEEEEECCC-------------CEEEEEETTTCCEEEEEEC
T ss_pred CceEEEEECCCC---ceeeeec-CCCCceeEEecCCCc-eEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheec
Confidence 999999999753 2344554 778899999999986 488888877 899999999999999999
Q ss_pred CCCeEEEEeecC-CCEEEEccCCceEEEeecc
Q 036314 314 HKDKVLCADWWR-GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 314 h~~~v~~~~~~~-~~~l~s~s~D~~v~vw~~~ 344 (347)
|.+.|.+++|+| +++|++++.||+|+||+..
T Consensus 314 ~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~ 345 (369)
T 3zwl_B 314 HFGPLNTVAISPQGTSYASGGEDGFIRLHHFE 345 (369)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEEEC
T ss_pred ccCcEEEEEECCCCCEEEEEcCCCeEEEEECc
Confidence 999999999985 7789999999999999864
No 42
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=8.6e-38 Score=276.67 Aligned_cols=249 Identities=24% Similarity=0.375 Sum_probs=203.1
Q ss_pred EEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEE
Q 036314 56 CTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVC 135 (347)
Q Consensus 56 ~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~ 135 (347)
+...|.+|.+.|.+++|+|.++ .+|+||+.|++|++|++...+. ....++..+.+|...|.+++|+|++++|+
T Consensus 9 l~~~l~gH~~~V~~l~~~~~~~---~~l~s~s~D~~v~~W~~~~~~~----~~~~~~~~~~~h~~~v~~~~~s~dg~~l~ 81 (319)
T 3frx_A 9 LRGTLEGHNGWVTSLATSAGQP---NLLLSASRDKTLISWKLTGDDQ----KFGVPVRSFKGHSHIVQDCTLTADGAYAL 81 (319)
T ss_dssp EEEEECCCSSCEEEEEECSSCT---TEEEEEETTSEEEEEEEEEETT----EEEEEEEEEECCSSCEEEEEECTTSSEEE
T ss_pred EEEEEccccceEEEEEccCCCc---cEEEEecCCccEEEecCCCCCc----cccccceEEeCCcccEEEEEECCCCCEEE
Confidence 3457899999999999998543 3799999999999999864321 11235667899999999999999999999
Q ss_pred EeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEEC
Q 036314 136 SGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDV 214 (347)
Q Consensus 136 sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~ 214 (347)
+|+.|++|++||+.++ +.+..+.+|...|.++.| +++..|++++.|++|++||+
T Consensus 82 s~s~D~~v~~wd~~~~-------------------------~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~ 136 (319)
T 3frx_A 82 SASWDKTLRLWDVATG-------------------------ETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTI 136 (319)
T ss_dssp EEETTSEEEEEETTTT-------------------------EEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEET
T ss_pred EEeCCCEEEEEECCCC-------------------------CeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 9999999999998753 345677899999999998 56788999999999999999
Q ss_pred CCCceeeeee-eCeeeEEEEeeCC-----CCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEE
Q 036314 215 EMGKDLSDIF-CGKALNCIDIGGE-----GSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHL 288 (347)
Q Consensus 215 ~~~~~~~~~~-~~~~~~~~~~~~~-----~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l 288 (347)
+. ..+..+. +...+.++.+.|. +...+++++.|+.|++||++.. .....+.+|...|.+++|+|++. +|
T Consensus 137 ~~-~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~---~~~~~~~~h~~~v~~~~~sp~g~-~l 211 (319)
T 3frx_A 137 KG-QCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQF---QIEADFIGHNSNINTLTASPDGT-LI 211 (319)
T ss_dssp TS-CEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTT---EEEEEECCCCSCEEEEEECTTSS-EE
T ss_pred CC-CeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcc---hhheeecCCCCcEEEEEEcCCCC-EE
Confidence 74 4444443 3346778888664 3447899999999999999742 34567889999999999999986 69
Q ss_pred EEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeecC-CCEEEEccCCceEEEeec
Q 036314 289 ISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKLCVSSG 343 (347)
Q Consensus 289 ~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~D~~v~vw~~ 343 (347)
++|+.|++|+|||+++++.+..+..| +.|.+++|+| +..|++++ ++.+++|+.
T Consensus 212 ~s~~~dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~sp~~~~la~~~-~~~i~v~~~ 265 (319)
T 3frx_A 212 ASAGKDGEIMLWNLAAKKAMYTLSAQ-DEVFSLAFSPNRYWLAAAT-ATGIKVFSL 265 (319)
T ss_dssp EEEETTCEEEEEETTTTEEEEEEECC-SCEEEEEECSSSSEEEEEE-TTEEEEEEE
T ss_pred EEEeCCCeEEEEECCCCcEEEEecCC-CcEEEEEEcCCCCEEEEEc-CCCcEEEEe
Confidence 99999999999999999888888754 6899999987 44566655 556999974
No 43
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=8.7e-38 Score=281.20 Aligned_cols=286 Identities=14% Similarity=0.122 Sum_probs=228.7
Q ss_pred CCcCCceeeccCC-CCCEEEEEecCCeEEEEcCC-Ce--EEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEe
Q 036314 21 SLHDDWVSAVDGS-NPGFILTGCYDNLGRVWKAG-GV--CTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWK 96 (347)
Q Consensus 21 ~~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~-~~--~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd 96 (347)
..|++.|++++++ ++.+|++|+.|++|++||.. +. ....+.+|...|.+++|+|++ ..|++++.|++|++||
T Consensus 5 ~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~----~~l~~~~~dg~i~vwd 80 (372)
T 1k8k_C 5 SFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDS----NRIVTCGTDRNAYVWT 80 (372)
T ss_dssp ESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTT----TEEEEEETTSCEEEEE
T ss_pred cccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCC----CEEEEEcCCCeEEEEE
Confidence 3588999999998 56799999999999999975 44 778899999999999999854 3699999999999999
Q ss_pred ccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccc
Q 036314 97 FDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEG 176 (347)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (347)
+..++. .....+..|...|.+++|+|++++|++++.|+.|++||+...... .
T Consensus 81 ~~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~---------------------~ 132 (372)
T 1k8k_C 81 LKGRTW-------KPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDW---------------------W 132 (372)
T ss_dssp EETTEE-------EEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTE---------------------E
T ss_pred CCCCee-------eeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcc---------------------e
Confidence 976542 122345679999999999999999999999999999998753210 0
Q ss_pred cccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECC------------------CCceeeeee-eCeeeEEEEeeC
Q 036314 177 EAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVE------------------MGKDLSDIF-CGKALNCIDIGG 236 (347)
Q Consensus 177 ~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~------------------~~~~~~~~~-~~~~~~~~~~~~ 236 (347)
.......+|...|.++.| ++++.|++++.|+.|++||++ .+..+..+. +...+.++.+++
T Consensus 133 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 212 (372)
T 1k8k_C 133 VCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSA 212 (372)
T ss_dssp EEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECS
T ss_pred eeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECC
Confidence 011123567889999998 577889999999999999964 455555553 234688999976
Q ss_pred CCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCC--Cc--------
Q 036314 237 EGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRT--AW-------- 306 (347)
Q Consensus 237 ~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~--~~-------- 306 (347)
+ +.++++++.|+.|++||++.. ..+..+..|...|.+++|+|++. +|+++ .|+.|++||++. ++
T Consensus 213 ~-~~~l~~~~~d~~i~i~d~~~~---~~~~~~~~~~~~v~~~~~~~~~~-~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~ 286 (372)
T 1k8k_C 213 N-GSRVAWVSHDSTVCLADADKK---MAVATLASETLPLLAVTFITESS-LVAAG-HDCFPVLFTYDSAAGKLSFGGRLD 286 (372)
T ss_dssp S-SSEEEEEETTTEEEEEEGGGT---TEEEEEECSSCCEEEEEEEETTE-EEEEE-TTSSCEEEEEETTTTEEEECCCCC
T ss_pred C-CCEEEEEeCCCEEEEEECCCC---ceeEEEccCCCCeEEEEEecCCC-EEEEE-eCCeEEEEEccCcCceEEEeeccC
Confidence 5 468899999999999999753 35778889999999999999984 46666 999999999987 31
Q ss_pred ------------------------cc------eee-cCCCCeEEEEeec-C-C---CEEEEccCCceEEEeecc
Q 036314 307 ------------------------PL------SVI-DSHKDKVLCADWW-R-G---DSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 307 ------------------------~~------~~~-~~h~~~v~~~~~~-~-~---~~l~s~s~D~~v~vw~~~ 344 (347)
.. ..+ .+|.+.|.+++|. + | .+|+||+.||+|+||+..
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~ 360 (372)
T 1k8k_C 287 VPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVR 360 (372)
T ss_dssp CC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHH
T ss_pred ccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEec
Confidence 00 223 4899999999975 4 4 799999999999999864
No 44
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.7e-37 Score=285.02 Aligned_cols=275 Identities=22% Similarity=0.328 Sum_probs=220.4
Q ss_pred ceeeccCCCCCEEEEEecCCeEEEEcCC-CeEEEEe--eccCCceEEEEEeecCCCceEEEEEccCCCcEEEEecccccc
Q 036314 26 WVSAVDGSNPGFILTGCYDNLGRVWKAG-GVCTHIL--EGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEEL 102 (347)
Q Consensus 26 ~v~~~~~~~~~~l~sg~~d~~i~iw~~~-~~~~~~l--~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~ 102 (347)
+++.++++.+++||+| .|++|+|||.. |.+.+.+ .+|...|++|+|+|++ .+|++|+.||+|++||+.+++
T Consensus 107 y~~~l~wS~~n~lAvg-ld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg----~~lasgs~Dg~v~iWd~~~~~- 180 (420)
T 4gga_A 107 YLNLVDWSSGNVLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEG----NYLAVGTSSAEVQLWDVQQQK- 180 (420)
T ss_dssp TCBCEEECTTSEEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTS----SEEEEEETTSCEEEEETTTTE-
T ss_pred cceeEEECCCCEEEEE-eCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCC----CEEEEEECCCeEEEEEcCCCc-
Confidence 3556677766777766 59999999974 6666654 4788899999999954 479999999999999998764
Q ss_pred ccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccc
Q 036314 103 VNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTL 182 (347)
Q Consensus 103 ~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (347)
.+..+.+|...+.+++++ +.++++|+.|+++++||..... ..+..+
T Consensus 181 --------~~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~------------------------~~~~~~ 226 (420)
T 4gga_A 181 --------RLRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAE------------------------HHVATL 226 (420)
T ss_dssp --------EEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSS------------------------CEEEEE
T ss_pred --------EEEEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccc------------------------eeeEEe
Confidence 456788999999888764 6899999999999999976431 234567
Q ss_pred cCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCcee----eee-eeCeeeEEEEeeCCCCcEEEE--ecCCCcEEEE
Q 036314 183 VGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDL----SDI-FCGKALNCIDIGGEGSALIAA--GGSDPILRIW 254 (347)
Q Consensus 183 ~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~la~--~~~d~~i~iw 254 (347)
.+|...+..+.+ +++..+++++.|+.+++||...++.. ... .....+.++++++.+..++++ |+.|++|++|
T Consensus 227 ~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iw 306 (420)
T 4gga_A 227 SGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIW 306 (420)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEE
T ss_pred cccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEE
Confidence 789999999987 57889999999999999999876532 112 233468899999888888765 4579999999
Q ss_pred eCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEE-eCCCcEEEEEcCCCccceeecCCCCeEEEEeecC-CCEEEEc
Q 036314 255 DPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA-SYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISG 332 (347)
Q Consensus 255 d~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~-s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~ 332 (347)
|++.. .....+. +...+.++.|+|++..+++++ +.|++|+|||+++++++.++.+|.+.|++++|+| |++||||
T Consensus 307 d~~t~---~~~~~~~-~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~ 382 (420)
T 4gga_A 307 NVCSG---ACLSAVD-AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASA 382 (420)
T ss_dssp ETTTT---EEEEEEE-CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEE
T ss_pred eCCcc---ccceeec-cccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEE
Confidence 99753 2344554 445688999999987644332 3799999999999999999999999999999985 7789999
Q ss_pred cCCceEEEeecc
Q 036314 333 GVDSKLCVSSGV 344 (347)
Q Consensus 333 s~D~~v~vw~~~ 344 (347)
|.|++|+||+.-
T Consensus 383 s~D~tvriWdv~ 394 (420)
T 4gga_A 383 AADETLRLWRCF 394 (420)
T ss_dssp ETTTEEEEECCS
T ss_pred ecCCeEEEEECC
Confidence 999999999864
No 45
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=3.5e-37 Score=271.30 Aligned_cols=276 Identities=21% Similarity=0.316 Sum_probs=219.7
Q ss_pred ceeeccCCCCCEEEEEecCCeEEEEcCC-CeEEEEe--eccCCceEEEEEeecCCCceEEEEEccCCCcEEEEecccccc
Q 036314 26 WVSAVDGSNPGFILTGCYDNLGRVWKAG-GVCTHIL--EGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEEL 102 (347)
Q Consensus 26 ~v~~~~~~~~~~l~sg~~d~~i~iw~~~-~~~~~~l--~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~ 102 (347)
+.+.+++|++++||+| .|++|+|||.. +++++.+ .+|...|.+++|+|++ ..|++|+.||+|++|++.+++
T Consensus 27 y~~~l~WS~~~~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~----~~l~sgs~Dg~v~iw~~~~~~- 100 (318)
T 4ggc_A 27 YLNLVDWSSGNVLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEG----NYLAVGTSSAEVQLWDVQQQK- 100 (318)
T ss_dssp TCBCEEECTTSEEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTS----SEEEEEETTSEEEEEETTTTE-
T ss_pred cceEEEECCCCEEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCC----CEEEEEECCCcEEEeecCCce-
Confidence 4678888877877765 69999999974 6776665 4788899999999954 379999999999999998764
Q ss_pred ccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccc
Q 036314 103 VNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTL 182 (347)
Q Consensus 103 ~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (347)
.+..+.+|...+.++.+ ++..+++++.++.+++|+..... ..+..+
T Consensus 101 --------~~~~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~------------------------~~~~~~ 146 (318)
T 4ggc_A 101 --------RLRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAE------------------------HHVATL 146 (318)
T ss_dssp --------EEEEEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSS------------------------CEEEEE
T ss_pred --------eEEEecCccceEEEeec--CCCEEEEEecCCceEeeecCCCc------------------------eeEEEE
Confidence 45677899998877654 56899999999999999876431 234566
Q ss_pred cCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeee-----eeCeeeEEEEeeCCCCcEE--EEecCCCcEEEE
Q 036314 183 VGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDI-----FCGKALNCIDIGGEGSALI--AAGGSDPILRIW 254 (347)
Q Consensus 183 ~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l--a~~~~d~~i~iw 254 (347)
.+|...+..+.+ +++..|++++.|++|++||+++++..... .....+.++.+.+.+..++ ++++.++.|++|
T Consensus 147 ~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lw 226 (318)
T 4ggc_A 147 SGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIW 226 (318)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEE
T ss_pred cCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEE
Confidence 788889998887 57788999999999999999876543221 1234577888877766654 567789999999
Q ss_pred eCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEE-EeCCCcEEEEEcCCCccceeecCCCCeEEEEeecC-CCEEEEc
Q 036314 255 DPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLIS-ASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISG 332 (347)
Q Consensus 255 d~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s-~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~ 332 (347)
|.+... ......+...+..+.|+|++..++++ ++.|++|+|||+++++++.++.+|.+.|++++|+| |++||||
T Consensus 227 d~~~~~----~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~ 302 (318)
T 4ggc_A 227 NVCSGA----CLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASA 302 (318)
T ss_dssp ETTTCC----EEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEE
T ss_pred eccccc----ccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEE
Confidence 987432 33444677789999999998764433 34799999999999999999999999999999985 7789999
Q ss_pred cCCceEEEeeccc
Q 036314 333 GVDSKLCVSSGVS 345 (347)
Q Consensus 333 s~D~~v~vw~~~~ 345 (347)
|.|++|+||+.-.
T Consensus 303 s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 303 AADETLRLWRCFE 315 (318)
T ss_dssp ETTTEEEEECCSC
T ss_pred ecCCeEEEEECCC
Confidence 9999999998643
No 46
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.3e-37 Score=277.93 Aligned_cols=251 Identities=20% Similarity=0.294 Sum_probs=211.2
Q ss_pred eEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEE
Q 036314 55 VCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMV 134 (347)
Q Consensus 55 ~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l 134 (347)
.....|.+|.+.|.+++|+|++ ..|++|+.||+|++||+.+++ ....+..|...|.+++|+|+++++
T Consensus 46 ~~~~~l~gH~~~v~~~~~s~d~----~~l~s~s~Dg~v~iWd~~~~~---------~~~~~~~~~~~v~~~~~s~~~~~l 112 (340)
T 1got_B 46 RTRRTLRGHLAKIYAMHWGTDS----RLLLSASQDGKLIIWDSYTTN---------KVHAIPLRSSWVMTCAYAPSGNYV 112 (340)
T ss_dssp CEEEEECCCSSCEEEEEECTTS----SEEEEEETTTEEEEEETTTCC---------EEEEEECSSSCEEEEEECTTSSEE
T ss_pred hhheeecCCCCceEEEEECCCC----CEEEEEeCCCcEEEEECCCCC---------cceEeecCCccEEEEEECCCCCEE
Confidence 4567899999999999999854 479999999999999987653 445678899999999999999999
Q ss_pred EEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeCCCCeEEEEecCCcEEEEEC
Q 036314 135 CSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDV 214 (347)
Q Consensus 135 ~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~dg~v~vwd~ 214 (347)
++|+.|++|++|++...... ......+.+|...|.++.|.++..+++++.|++|++||+
T Consensus 113 ~s~~~d~~v~iw~~~~~~~~---------------------~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~ 171 (340)
T 1got_B 113 ACGGLDNICSIYNLKTREGN---------------------VRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDI 171 (340)
T ss_dssp EEEETTCEEEEEETTTCSBS---------------------CEEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEET
T ss_pred EEEeCCCeEEEEECccCCCc---------------------ceeEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEEC
Confidence 99999999999998753210 112345678999999999976678999999999999999
Q ss_pred CCCceeeeeee-CeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeC
Q 036314 215 EMGKDLSDIFC-GKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASY 293 (347)
Q Consensus 215 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~ 293 (347)
++++.+..+.. ...+.+++++|+ +.++++|+.|+.|++||++.. .....+.+|...|.+++|+|++. +|++|+.
T Consensus 172 ~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~sg~~d~~v~~wd~~~~---~~~~~~~~h~~~v~~v~~~p~~~-~l~s~s~ 246 (340)
T 1got_B 172 ETGQQTTTFTGHTGDVMSLSLAPD-TRLFVSGACDASAKLWDVREG---MCRQTFTGHESDINAICFFPNGN-AFATGSD 246 (340)
T ss_dssp TTTEEEEEECCCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTTC---SEEEEECCCSSCEEEEEECTTSS-EEEEEET
T ss_pred CCCcEEEEEcCCCCceEEEEECCC-CCEEEEEeCCCcEEEEECCCC---eeEEEEcCCcCCEEEEEEcCCCC-EEEEEcC
Confidence 99988777653 347899999765 568899999999999999753 34678899999999999999986 5999999
Q ss_pred CCcEEEEEcCCCccceeec--CCCCeEEEEeecC-CCEEEEccCCceEEEeecc
Q 036314 294 DGKVMLWDLRTAWPLSVID--SHKDKVLCADWWR-GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 294 D~~i~lwd~~~~~~~~~~~--~h~~~v~~~~~~~-~~~l~s~s~D~~v~vw~~~ 344 (347)
|++|++||+++++.+..+. .+...|.+++|+| |++|++|+.|++|+||+..
T Consensus 247 d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~ 300 (340)
T 1got_B 247 DATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL 300 (340)
T ss_dssp TSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred CCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcc
Confidence 9999999999887766654 3345799999985 7789999999999999864
No 47
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.3e-38 Score=282.42 Aligned_cols=257 Identities=25% Similarity=0.396 Sum_probs=201.7
Q ss_pred CCCcCCceeeccCC-CCCEEEEEecCCeEEEEcCC-C--eEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEE
Q 036314 20 PSLHDDWVSAVDGS-NPGFILTGCYDNLGRVWKAG-G--VCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLW 95 (347)
Q Consensus 20 ~~~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~-~--~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~w 95 (347)
..+|...|++++|+ ++.+||+|+.|+++++|+.. + .++..+.+|.+.|.+++|+|++ ..|++++.|++|++|
T Consensus 57 ~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~----~~l~s~s~D~~v~iw 132 (345)
T 3fm0_A 57 SEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSG----NLLATCSRDKSVWVW 132 (345)
T ss_dssp CSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTS----SEEEEEETTSCEEEE
T ss_pred ccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCC----CEEEEEECCCeEEEE
Confidence 45899999999998 46799999999999999864 2 4677899999999999999954 379999999999999
Q ss_pred eccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccc
Q 036314 96 KFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLE 175 (347)
Q Consensus 96 d~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (347)
|+..++ ...+...+.+|...|.+++|+|++++|++|+.|++|++|+.....
T Consensus 133 d~~~~~------~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~----------------------- 183 (345)
T 3fm0_A 133 EVDEED------EYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDD----------------------- 183 (345)
T ss_dssp EECTTS------CEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTE-----------------------
T ss_pred ECCCCC------CeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCC-----------------------
Confidence 987542 223456788999999999999999999999999999999976431
Q ss_pred ccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCce---------------eeeee--eCeeeEEEEeeCC
Q 036314 176 GEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKD---------------LSDIF--CGKALNCIDIGGE 237 (347)
Q Consensus 176 ~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~---------------~~~~~--~~~~~~~~~~~~~ 237 (347)
..+...+.+|...|.+++| |++++|++++.|++|++||...+.. +..+. +...+.++++++.
T Consensus 184 ~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~ 263 (345)
T 3fm0_A 184 WVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQL 263 (345)
T ss_dssp EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTT
T ss_pred EEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecC
Confidence 1234567889999999999 5788999999999999999743211 11111 2346788999776
Q ss_pred CCcEEEEecCCCcEEEEeCCCCCCC-CCe-----EEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCcccee
Q 036314 238 GSALIAAGGSDPILRIWDPRKPGTS-APV-----FQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSV 310 (347)
Q Consensus 238 ~~~~la~~~~d~~i~iwd~~~~~~~-~~~-----~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~ 310 (347)
+ ..+++++.|+.|++|+....... .+. ..+.+|.+.|.+++|+|++..+||||+.||+|++|++++++.+..
T Consensus 264 ~-~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~~~ 341 (345)
T 3fm0_A 264 T-GALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGLHH 341 (345)
T ss_dssp T-CCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC------
T ss_pred C-CEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCccc
Confidence 5 46788999999999997643211 111 223589999999999999866799999999999999998765544
No 48
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.5e-38 Score=279.24 Aligned_cols=256 Identities=22% Similarity=0.348 Sum_probs=198.2
Q ss_pred eEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeee-ec-cccceEEEEEeCCCC
Q 036314 55 VCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKIL-RG-HKASVHSIAAETSGN 132 (347)
Q Consensus 55 ~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~-~~-h~~~V~~v~~s~~~~ 132 (347)
.+++.|.+|.+.|.+++|+++ .|++|+.|++|++||+..++. .....+ .+ |..+|.+++|+|+++
T Consensus 5 ~~~~~~~~h~~~v~~~~~s~~------~las~~~D~~i~lw~~~~~~~-------~~~~~~~~~~h~~~v~~v~~sp~~~ 71 (330)
T 2hes_X 5 NLIKSLKLYKEKIWSFDFSQG------ILATGSTDRKIKLVSVKYDDF-------TLIDVLDETAHKKAIRSVAWRPHTS 71 (330)
T ss_dssp EEEEEEECCSSCEEEEEEETT------EEEEEESSSCEEEEECSSSCC-------EEEEEECTTCCCSCEEEEEECTTSS
T ss_pred ccceeeccCCCceeeeccCCC------EEEEEcCCCEEEEEEecCCCe-------EEEEEEecCCccCCEEEEEECCCCC
Confidence 467789999999999999873 699999999999999875421 223344 34 999999999999999
Q ss_pred EEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CCCCeEEEEecCCcEEE
Q 036314 133 MVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRT 211 (347)
Q Consensus 133 ~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~v 211 (347)
+|++|+.|++|+||++...... ......+..+.+|...|.+++| |++++|++++.|++|++
T Consensus 72 ~las~s~D~~v~iw~~~~~~~~------------------~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~i 133 (330)
T 2hes_X 72 LLAAGSFDSTVSIWAKEESADR------------------TFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWI 133 (330)
T ss_dssp EEEEEETTSCEEEEEC-------------------------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEE
T ss_pred EEEEEeCCCcEEEEEcccCcCc------------------cccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEE
Confidence 9999999999999998532100 0012335567899999999999 57889999999999999
Q ss_pred EECCCC----ceeeeee-eCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCC-C
Q 036314 212 WDVEMG----KDLSDIF-CGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKS-W 285 (347)
Q Consensus 212 wd~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~ 285 (347)
||++.. +.+..+. +...+.+++|+|+ +.+|++++.|++|++||.+.. ....+..+.+|...|.+++|+|++ .
T Consensus 134 wd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~-~~~l~s~s~D~~i~iW~~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~ 211 (330)
T 2hes_X 134 WETDESGEEYECISVLQEHSQDVKHVIWHPS-EALLASSSYDDTVRIWKDYDD-DWECVAVLNGHEGTVWSSDFDKTEGV 211 (330)
T ss_dssp EECCTTCCCCEEEEEECCCSSCEEEEEECSS-SSEEEEEETTSCEEEEEEETT-EEEEEEEECCCSSCEEEEEECCSSSS
T ss_pred EeccCCCCCeEEEEEeccCCCceEEEEECCC-CCEEEEEcCCCeEEEEECCCC-CeeEEEEccCCCCcEEEEEecCCCCe
Confidence 999532 2333333 3356899999765 568899999999999997642 123467889999999999999983 2
Q ss_pred eEEEEEeCCCcEEEEEcCCC--------ccceeecC-CCCeEEEEeecCCCEEEEccCCceEEEeec
Q 036314 286 FHLISASYDGKVMLWDLRTA--------WPLSVIDS-HKDKVLCADWWRGDSVISGGVDSKLCVSSG 343 (347)
Q Consensus 286 ~~l~s~s~D~~i~lwd~~~~--------~~~~~~~~-h~~~v~~~~~~~~~~l~s~s~D~~v~vw~~ 343 (347)
.+|++|+.|++|++||++.+ .....+.+ |...|++++|+++.+|++++.|++|+||+.
T Consensus 212 ~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~ 278 (330)
T 2hes_X 212 FRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEE 278 (330)
T ss_dssp CEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEEE
T ss_pred eEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCEEEEEeCCCEEEEEEc
Confidence 46999999999999999764 23344544 999999999998889999999999999984
No 49
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.2e-38 Score=287.41 Aligned_cols=291 Identities=12% Similarity=0.057 Sum_probs=209.5
Q ss_pred CceeeccCC-CCCEEEEEecC-------CeEEEEcCCC-----------eEEEEeeccCCceEEEEEeecC-----CCce
Q 036314 25 DWVSAVDGS-NPGFILTGCYD-------NLGRVWKAGG-----------VCTHILEGHCGAVSSVNIIKSD-----GLKY 80 (347)
Q Consensus 25 ~~v~~~~~~-~~~~l~sg~~d-------~~i~iw~~~~-----------~~~~~l~~h~~~V~~v~~~~~~-----~~~~ 80 (347)
-+|.+++|+ ++.+||+||.| ++|++|+... .....|.+|+..|.++++.+.. +...
T Consensus 15 ~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~~~~~~g~~~~~ 94 (365)
T 4h5i_A 15 YPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDASKGIILVGCNENS 94 (365)
T ss_dssp SCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEETTEEEEECCCCH
T ss_pred CCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeCCCEEEEEECCCc
Confidence 479999998 45689998764 3699998531 0123577899999999875420 0011
Q ss_pred EEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEE--EeeCCCcEEEEecCCCCCCCccc
Q 036314 81 VTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVC--SGSWDCTISLWRTNDSDAAGNQV 158 (347)
Q Consensus 81 ~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~--sgs~Dg~I~iwd~~~~~~~~~~~ 158 (347)
..|++++.|+++|+|++...+................+...+.+++|+|||++++ +++.|++|+|||+++..
T Consensus 95 ~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~------ 168 (365)
T 4h5i_A 95 TKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLT------ 168 (365)
T ss_dssp HHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTE------
T ss_pred cEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCc------
Confidence 1234566789999999875431110000001112234566789999999999875 56689999999987642
Q ss_pred eeeeccCCCccccccccccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeee---eCeeeEEEEe
Q 036314 159 SIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIF---CGKALNCIDI 234 (347)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~---~~~~~~~~~~ 234 (347)
.+..+ .|...|.+++| |+++++++++ ++.+++|+..++..+.... ....+.+++|
T Consensus 169 -------------------~~~~~-~~~~~V~~v~fspdg~~l~s~s-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~f 227 (365)
T 4h5i_A 169 -------------------EKFEI-ETRGEVKDLHFSTDGKVVAYIT-GSSLEVISTVTGSCIARKTDFDKNWSLSKINF 227 (365)
T ss_dssp -------------------EEEEE-ECSSCCCEEEECTTSSEEEEEC-SSCEEEEETTTCCEEEEECCCCTTEEEEEEEE
T ss_pred -------------------EEEEe-CCCCceEEEEEccCCceEEecc-ceeEEEEEeccCcceeeeecCCCCCCEEEEEE
Confidence 23333 36678999999 5778888877 5567777777776554322 2346889999
Q ss_pred eCCCCcEEEEecCCC----cEEEEeCCCCCC-CCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccce
Q 036314 235 GGEGSALIAAGGSDP----ILRIWDPRKPGT-SAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLS 309 (347)
Q Consensus 235 ~~~~~~~la~~~~d~----~i~iwd~~~~~~-~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~ 309 (347)
+|++ ..+++++.|+ .+++||+..... ......+.+|...|.+++|+|++. +||+|+.|++|+|||+++++++.
T Consensus 228 spdg-~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~-~lasgs~D~~V~iwd~~~~~~~~ 305 (365)
T 4h5i_A 228 IADD-TVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGE-LAVLASNDNSIALVKLKDLSMSK 305 (365)
T ss_dssp EETT-EEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSC-EEEEEETTSCEEEEETTTTEEEE
T ss_pred cCCC-CEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCC-ceEEEcCCCEEEEEECCCCcEEE
Confidence 8765 5667777666 688898764221 112356789999999999999986 69999999999999999999888
Q ss_pred ee-cCCCCeEEEEeecC-CCEEEEccCCceEEEeecc
Q 036314 310 VI-DSHKDKVLCADWWR-GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 310 ~~-~~h~~~v~~~~~~~-~~~l~s~s~D~~v~vw~~~ 344 (347)
++ .+|.+.|++++|+| |++|||||.|++|+||+.+
T Consensus 306 ~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip 342 (365)
T 4h5i_A 306 IFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLP 342 (365)
T ss_dssp EETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECC
T ss_pred EecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcC
Confidence 75 79999999999986 7789999999999999976
No 50
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.4e-38 Score=293.74 Aligned_cols=282 Identities=15% Similarity=0.181 Sum_probs=213.2
Q ss_pred CCcCCceeeccCCC--CCEEEEEecCCeEEEEcCC-C--eEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEE
Q 036314 21 SLHDDWVSAVDGSN--PGFILTGCYDNLGRVWKAG-G--VCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLW 95 (347)
Q Consensus 21 ~~h~~~v~~~~~~~--~~~l~sg~~d~~i~iw~~~-~--~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~w 95 (347)
.+|...|++++|++ +.+||+|+.||+|+|||.. + .....+.+|.+.|.+|+|+|.++ ..|+|+|.||+|++|
T Consensus 116 ~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~---~~l~s~s~D~~v~iw 192 (435)
T 4e54_B 116 APFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNT---NQFYASSMEGTTRLQ 192 (435)
T ss_dssp EECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCT---TEEEEECSSSCEEEE
T ss_pred CCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCC---CEEEEEeCCCEEEEe
Confidence 46889999999873 5699999999999999974 2 34556789999999999998543 379999999999999
Q ss_pred eccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccc
Q 036314 96 KFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLE 175 (347)
Q Consensus 96 d~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (347)
|+..+.+ +.+.....+...+.+++|++++++|++|+.||+|++||++.
T Consensus 193 d~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~------------------------- 240 (435)
T 4e54_B 193 DFKGNIL-------RVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG------------------------- 240 (435)
T ss_dssp ETTSCEE-------EEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS-------------------------
T ss_pred eccCCce-------eEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc-------------------------
Confidence 9875431 12222223455678899999999999999999999999753
Q ss_pred ccccccccCCccceEEEEeC-CCC-eEEEEecCCcEEEEECCCCceeeee----eeCeeeEEEEeeCCCCcEEEEecCCC
Q 036314 176 GEAISTLVGHTQCVSSVVWP-QQE-TIYSASWDHSVRTWDVEMGKDLSDI----FCGKALNCIDIGGEGSALIAAGGSDP 249 (347)
Q Consensus 176 ~~~~~~~~~h~~~v~~~~~~-~~~-~l~s~s~dg~v~vwd~~~~~~~~~~----~~~~~~~~~~~~~~~~~~la~~~~d~ 249 (347)
..+..+.+|...|.+++|. +++ .+++++.|++|++||++..+....+ .+...+.+++|+++ +.+|++++.|+
T Consensus 241 -~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spd-g~~l~s~~~D~ 318 (435)
T 4e54_B 241 -KELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPD-GARLLTTDQKS 318 (435)
T ss_dssp -CBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTT-SSEEEEEESSS
T ss_pred -ceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCC-CCeeEEEcCCC
Confidence 2345677899999999984 544 6889999999999999887654333 23457889999765 56889999999
Q ss_pred cEEEEeCCCCCCCCCeEEecCCCC------CeeEEEeCCCCCeEEEEE------------eCCCcEEEEEcCCCccceee
Q 036314 250 ILRIWDPRKPGTSAPVFQFSSHNS------WISACKWHNKSWFHLISA------------SYDGKVMLWDLRTAWPLSVI 311 (347)
Q Consensus 250 ~i~iwd~~~~~~~~~~~~~~~h~~------~v~~v~~s~~~~~~l~s~------------s~D~~i~lwd~~~~~~~~~~ 311 (347)
.|++||++... ....+..|.. .+..+.|+|++.. ++++ ..++.|++||..+++.+..+
T Consensus 319 ~i~iwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l 394 (435)
T 4e54_B 319 EIRVYSASQWD---CPLGLIPHPHRHFQHLTPIKAAWHPRYNL-IVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQL 394 (435)
T ss_dssp CEEEEESSSSS---SEEEECCCCCCCCSSSCCCBCEECSSSSC-EEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEE
T ss_pred EEEEEECCCCc---cceEEecccccccccceeEEEEEcCCCCE-EEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEE
Confidence 99999987532 2334444432 1234556666543 3333 24468999999999888776
Q ss_pred -cCCCCeEEEE-eecC-CCEEEEccCCceEEEeecc
Q 036314 312 -DSHKDKVLCA-DWWR-GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 312 -~~h~~~v~~~-~~~~-~~~l~s~s~D~~v~vw~~~ 344 (347)
.+|...|.++ +|+| |.+||+|+ |++|+||+.-
T Consensus 395 ~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~ 429 (435)
T 4e54_B 395 YDPESSGISSLNEFNPMGDTLASAM-GYHILIWSQQ 429 (435)
T ss_dssp CCSSCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC
T ss_pred eCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEECC
Confidence 4788888887 5885 66788876 8899999854
No 51
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.5e-39 Score=291.48 Aligned_cols=286 Identities=12% Similarity=0.112 Sum_probs=214.5
Q ss_pred CcCCceeeccCC-CCCEEEEEecCCeEEEEcCC-C--eEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEec
Q 036314 22 LHDDWVSAVDGS-NPGFILTGCYDNLGRVWKAG-G--VCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKF 97 (347)
Q Consensus 22 ~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~-~--~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~ 97 (347)
.|.+.|++++++ ++.+||+|+.|++|++|+.. + .+...+.+|.+.|.+++|+|++. .|++++.|++|++||+
T Consensus 9 ~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~----~l~s~s~d~~v~vwd~ 84 (377)
T 3dwl_C 9 ILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSN----RIVTCSQDRNAYVYEK 84 (377)
T ss_dssp ECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTC----CEEEEETTSSEEEC--
T ss_pred cCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCC----EEEEEeCCCeEEEEEc
Confidence 456789999998 56799999999999999975 4 56778999999999999998543 6999999999999999
Q ss_pred cccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccccc
Q 036314 98 DAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGE 177 (347)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (347)
..++ ...+...+.+|...|.+++|+|++++|++++.|++|++||++.... ..
T Consensus 85 ~~~~------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~----------------------~~ 136 (377)
T 3dwl_C 85 RPDG------TWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQEND----------------------WW 136 (377)
T ss_dssp ----------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC---------------------------CC
T ss_pred CCCC------ceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCccc----------------------ce
Confidence 8654 1223456778999999999999999999999999999999875421 01
Q ss_pred ccccccC-CccceEEEEe-CCCCeEEEEecCCcEEEEECCC------------------CceeeeeeeCeeeEEEEeeCC
Q 036314 178 AISTLVG-HTQCVSSVVW-PQQETIYSASWDHSVRTWDVEM------------------GKDLSDIFCGKALNCIDIGGE 237 (347)
Q Consensus 178 ~~~~~~~-h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~------------------~~~~~~~~~~~~~~~~~~~~~ 237 (347)
....+.+ |...|.+++| |++++|++++.|++|++||++. ++.+..+.+...+.+++++|+
T Consensus 137 ~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~ 216 (377)
T 3dwl_C 137 VSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPS 216 (377)
T ss_dssp CCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTT
T ss_pred eeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCC
Confidence 2344555 8999999998 5778999999999999999853 223333333446889999765
Q ss_pred CCcEEEEecCCCcEEEEeCCCCCCC-CCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCc-c-c------
Q 036314 238 GSALIAAGGSDPILRIWDPRKPGTS-APVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAW-P-L------ 308 (347)
Q Consensus 238 ~~~~la~~~~d~~i~iwd~~~~~~~-~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~-~-~------ 308 (347)
+.+|++++.|+.|++||++....+ ..+..+.+|...|.+++|+|++. +|++++.|+.+ +|+..... . .
T Consensus 217 -~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 293 (377)
T 3dwl_C 217 -GNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESA-IVAAGYNYSPI-LLQGNESGWAHTRDLDAG 293 (377)
T ss_dssp -SSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTE-EEEEESSSSEE-EECCCC---CCSBCCCSC
T ss_pred -CCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCC-EEEEEcCCcEE-EEEeCCCceEEEeeeccc
Confidence 457889999999999999764321 01567789999999999999984 68888766665 67664211 0 0
Q ss_pred ----------------------------e----------------eecCCCCeEEEEeecC--CC---EEEEccCCceEE
Q 036314 309 ----------------------------S----------------VIDSHKDKVLCADWWR--GD---SVISGGVDSKLC 339 (347)
Q Consensus 309 ----------------------------~----------------~~~~h~~~v~~~~~~~--~~---~l~s~s~D~~v~ 339 (347)
. ....|.+.|.++.+.+ +. +|+|||.||+|+
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~ 373 (377)
T 3dwl_C 294 TSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVV 373 (377)
T ss_dssp CCCCCBSSSSSBCCCCCC-------------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEE
T ss_pred ccccccccccccccccccccccccccccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEE
Confidence 0 0123999999999753 33 699999999999
Q ss_pred Eee
Q 036314 340 VSS 342 (347)
Q Consensus 340 vw~ 342 (347)
||+
T Consensus 374 iWd 376 (377)
T 3dwl_C 374 LWT 376 (377)
T ss_dssp EEC
T ss_pred Eec
Confidence 997
No 52
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.4e-38 Score=281.36 Aligned_cols=253 Identities=19% Similarity=0.223 Sum_probs=193.4
Q ss_pred CCCCcCCceeeccCC-CCCEEEEEecCCeEEEEcCC-Ce--EEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEE
Q 036314 19 EPSLHDDWVSAVDGS-NPGFILTGCYDNLGRVWKAG-GV--CTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRL 94 (347)
Q Consensus 19 ~~~~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~-~~--~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~ 94 (347)
...+|++.|++++|+ ++++|||||.|++|++||+. +. ++..|.+|.+.|.+++|+++. ++..|+||+.|++|++
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~--~~~~l~s~s~D~~v~i 85 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPM--YGNILASCSYDRKVII 85 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGG--GSSCEEEEETTSCEEE
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCC--CCCEEEEEECCCEEEE
Confidence 356899999999998 56799999999999999974 32 467899999999999997631 1236999999999999
Q ss_pred EeccccccccCccccceeeeeeccccceEEEEEeCC--CCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccc
Q 036314 95 WKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETS--GNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEP 172 (347)
Q Consensus 95 wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~--~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (347)
||+.+++ .+....+.+|..+|.+++|+|+ +.+|++|+.|++|++|++.....
T Consensus 86 Wd~~~~~-------~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~------------------- 139 (316)
T 3bg1_A 86 WREENGT-------WEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQ------------------- 139 (316)
T ss_dssp ECCSSSC-------CCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSC-------------------
T ss_pred EECCCCc-------ceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCC-------------------
Confidence 9987643 1244567899999999999998 78999999999999999865310
Q ss_pred cccccccccccCCccceEEEEeCC------------------CCeEEEEecCCcEEEEECCCCc---eeeeeee-CeeeE
Q 036314 173 QLEGEAISTLVGHTQCVSSVVWPQ------------------QETIYSASWDHSVRTWDVEMGK---DLSDIFC-GKALN 230 (347)
Q Consensus 173 ~~~~~~~~~~~~h~~~v~~~~~~~------------------~~~l~s~s~dg~v~vwd~~~~~---~~~~~~~-~~~~~ 230 (347)
......+.+|...+.++.|.+ +++|++++.|++|++||++... .+..+.. ...+.
T Consensus 140 ---~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~ 216 (316)
T 3bg1_A 140 ---WEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVR 216 (316)
T ss_dssp ---EEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEE
T ss_pred ---cceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceE
Confidence 001234456777777777732 3689999999999999997542 3334432 34689
Q ss_pred EEEeeCCC---CcEEEEecCCCcEEEEeCCCCCCC-CCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcC
Q 036314 231 CIDIGGEG---SALIAAGGSDPILRIWDPRKPGTS-APVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLR 303 (347)
Q Consensus 231 ~~~~~~~~---~~~la~~~~d~~i~iwd~~~~~~~-~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~ 303 (347)
+++|+|++ ..+|++++.|++|++||++..... .....+..|.+.|.+++|+|++. +||+++.|++|+||+..
T Consensus 217 ~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~-~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 217 DVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITAN-ILAVSGGDNKVTLWKES 292 (316)
T ss_dssp EEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTC-CEEEEESSSCEEEEEEC
T ss_pred EEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCC-EEEEEcCCCeEEEEEEC
Confidence 99998764 368999999999999998752111 11234567899999999999986 59999999999999986
No 53
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-37 Score=283.54 Aligned_cols=277 Identities=16% Similarity=0.209 Sum_probs=232.9
Q ss_pred CcCCceeeccCC-CCCEEEEEecCCeEEEEcCCCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEecccc
Q 036314 22 LHDDWVSAVDGS-NPGFILTGCYDNLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAE 100 (347)
Q Consensus 22 ~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~ 100 (347)
+|.+.|++++++ ++.+|++|+.|++|++|+..+.....+.+|...|.+++|+|++ ..|++++.|+.|++||+.++
T Consensus 106 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~v~~~~~~~~~----~~l~~~~~d~~i~iwd~~~~ 181 (425)
T 1r5m_A 106 KTTNQVTCLAWSHDGNSIVTGVENGELRLWNKTGALLNVLNFHRAPIVSVKWNKDG----THIISMDVENVTILWNVISG 181 (425)
T ss_dssp --CBCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCCSCEEEEEECTTS----SEEEEEETTCCEEEEETTTT
T ss_pred CCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeeccCCCccEEEEEECCCC----CEEEEEecCCeEEEEECCCC
Confidence 478899999998 5679999999999999998888889999999999999999854 36899999999999999766
Q ss_pred ccccCccccceeeeeeccccc---------------eEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccC
Q 036314 101 ELVNHPKKIRSFKILRGHKAS---------------VHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKG 165 (347)
Q Consensus 101 ~~~~~~~~~~~~~~~~~h~~~---------------V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~ 165 (347)
+. ...+..|... +.+++|++++ .+++++.|+.|++||+...
T Consensus 182 ~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~-------------- 237 (425)
T 1r5m_A 182 TV---------MQHFELKETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEK-------------- 237 (425)
T ss_dssp EE---------EEEECCC---------------CCCBSCCEEEETT-EEEEECGGGCEEEEETTCS--------------
T ss_pred cE---------EEEeeccccCccceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCC--------------
Confidence 42 3344555555 8899999875 5888999999999998753
Q ss_pred CCccccccccccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeee-eCeeeEEEEeeCCCCcEEE
Q 036314 166 NNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIF-CGKALNCIDIGGEGSALIA 243 (347)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~la 243 (347)
..+..+.+|...|.++.| ++++.|++++.|+.|++||+++++.+..+. +...+.++.+.+++ .++
T Consensus 238 -----------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~ 304 (425)
T 1r5m_A 238 -----------TPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD--KVI 304 (425)
T ss_dssp -----------SCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT--EEE
T ss_pred -----------ceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC--EEE
Confidence 224456678899999998 677899999999999999999887776665 34578899998765 888
Q ss_pred EecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCc-----------------
Q 036314 244 AGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAW----------------- 306 (347)
Q Consensus 244 ~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~----------------- 306 (347)
+++.|+.|++||++.. ..+..+..|...|.+++|+|++. +|++++.|+.|++||+++++
T Consensus 305 ~~~~d~~i~i~d~~~~---~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~ 380 (425)
T 1r5m_A 305 SCSMDGSVRLWSLKQN---TLLALSIVDGVPIFAGRISQDGQ-KYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPL 380 (425)
T ss_dssp EEETTSEEEEEETTTT---EEEEEEECTTCCEEEEEECTTSS-EEEEEETTSCEEEEECHHHHC--------------CE
T ss_pred EEeCCCcEEEEECCCC---cEeEecccCCccEEEEEEcCCCC-EEEEEECCCeEEEEECCCCccceeeeecccccccCcc
Confidence 9999999999999753 34677888999999999999986 69999999999999999877
Q ss_pred ---cceeecCCCC--eEEEEeecC-CCEEEEccCCceEEEeec
Q 036314 307 ---PLSVIDSHKD--KVLCADWWR-GDSVISGGVDSKLCVSSG 343 (347)
Q Consensus 307 ---~~~~~~~h~~--~v~~~~~~~-~~~l~s~s~D~~v~vw~~ 343 (347)
.+..+.+|.. .|.++.|++ +++|++++.|++|+||+.
T Consensus 381 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 423 (425)
T 1r5m_A 381 PIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAI 423 (425)
T ss_dssp ECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEEC
T ss_pred cchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEee
Confidence 7788899976 999999985 678999999999999985
No 54
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.1e-38 Score=291.08 Aligned_cols=286 Identities=12% Similarity=0.187 Sum_probs=219.9
Q ss_pred CCcCCceeeccCCC--CCEEEEEecCCeEEEEcCC----Ce---EEEEeeccCCceEEEEEeecCCCceEEEEEccCCCc
Q 036314 21 SLHDDWVSAVDGSN--PGFILTGCYDNLGRVWKAG----GV---CTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQT 91 (347)
Q Consensus 21 ~~h~~~v~~~~~~~--~~~l~sg~~d~~i~iw~~~----~~---~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~ 91 (347)
.+|.+.|+++++++ +.+|||||.|++|++||.. +. +...+ +|.+.|.+++|++++ ..|++++.||+
T Consensus 60 ~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~----~~l~s~s~dg~ 134 (437)
T 3gre_A 60 ENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNF----DAFAVSSKDGQ 134 (437)
T ss_dssp TTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTS----SEEEEEETTSE
T ss_pred cCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCC----CEEEEEeCCCE
Confidence 67999999999876 4699999999999999863 22 12222 699999999999844 37999999999
Q ss_pred EEEEecc---ccccccCccccceeeeee--c--cccceEEEE--EeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeee
Q 036314 92 LRLWKFD---AEELVNHPKKIRSFKILR--G--HKASVHSIA--AETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKK 162 (347)
Q Consensus 92 v~~wd~~---~~~~~~~~~~~~~~~~~~--~--h~~~V~~v~--~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~ 162 (347)
|++||+. .++...... ...+..+. . +...+.++. +++++.++++|+.|++|++||+.+.
T Consensus 135 i~vwd~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~----------- 202 (437)
T 3gre_A 135 IIVLKVNHYQQESEVKFLN-CECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTL----------- 202 (437)
T ss_dssp EEEEEEEEEEETTEEEEEE-EEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTC-----------
T ss_pred EEEEEeccccCCceeeccc-cceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC-----------
Confidence 9999995 332211100 01111121 2 556677777 5688999999999999999998763
Q ss_pred ccCCCccccccccccccccccC--CccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeee--eCeeeEEEEeeC-
Q 036314 163 RKGNNQVEEPQLEGEAISTLVG--HTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIF--CGKALNCIDIGG- 236 (347)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~--~~~~~~~~~~~~- 236 (347)
+.+..+.+ |...|.+++| |++..|++++.||+|++||+++++.+..+. ....+.++.+.+
T Consensus 203 --------------~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~ 268 (437)
T 3gre_A 203 --------------ERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQF 268 (437)
T ss_dssp --------------CEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTT
T ss_pred --------------eeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccc
Confidence 23445555 7889999998 577889999999999999999988877664 345788886654
Q ss_pred --CCCcEEEEecCCCcEEEEeCCCCCCCCCeEEec------------------------C--CCCCeeEEEeCCCCCeEE
Q 036314 237 --EGSALIAAGGSDPILRIWDPRKPGTSAPVFQFS------------------------S--HNSWISACKWHNKSWFHL 288 (347)
Q Consensus 237 --~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~------------------------~--h~~~v~~v~~s~~~~~~l 288 (347)
+++.++++++.|+.|++||++... ....+. + |...|.+++|+ ++ .+|
T Consensus 269 ~s~~~~~l~s~~~dg~i~iwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~-~~l 343 (437)
T 3gre_A 269 YGKNSVIVVGGSSKTFLTIWNFVKGH---CQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-ND-KIL 343 (437)
T ss_dssp TCTTEEEEEEESTTEEEEEEETTTTE---EEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TT-EEE
T ss_pred cCCCccEEEEEcCCCcEEEEEcCCCc---EEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-Cc-eEE
Confidence 356689999999999999997432 122222 2 66678888998 44 579
Q ss_pred EEEeCCCcEEEEEcCCCccceeecC-------------------------------------CCCeEEEEeecC---CCE
Q 036314 289 ISASYDGKVMLWDLRTAWPLSVIDS-------------------------------------HKDKVLCADWWR---GDS 328 (347)
Q Consensus 289 ~s~s~D~~i~lwd~~~~~~~~~~~~-------------------------------------h~~~v~~~~~~~---~~~ 328 (347)
++|+.|+.|++||+++++....+.+ |.+.|.+++|.+ +.+
T Consensus 344 ~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~ 423 (437)
T 3gre_A 344 LTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPL 423 (437)
T ss_dssp EEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEE
T ss_pred EecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceE
Confidence 9999999999999999887777665 899999999963 447
Q ss_pred EEEccCCceEEEee
Q 036314 329 VISGGVDSKLCVSS 342 (347)
Q Consensus 329 l~s~s~D~~v~vw~ 342 (347)
|+||+.||+|+||+
T Consensus 424 l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 424 LVACDNSGLIGIFQ 437 (437)
T ss_dssp EEEEETTSCEEEEC
T ss_pred EEEEcCCceEEEeC
Confidence 99999999999996
No 55
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=7.4e-37 Score=274.60 Aligned_cols=254 Identities=21% Similarity=0.285 Sum_probs=209.8
Q ss_pred eEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEE
Q 036314 55 VCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMV 134 (347)
Q Consensus 55 ~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l 134 (347)
.....|.+|.+.|.+++|+|++ ..|+||+.||+|++||..+++ ....+..|...|.+++|+|++..+
T Consensus 55 ~~~~~l~gH~~~V~~~~~s~d~----~~l~s~s~Dg~v~vWd~~~~~---------~~~~~~~~~~~v~~~~~sp~g~~l 121 (354)
T 2pbi_B 55 KTRRTLKGHGNKVLCMDWCKDK----RRIVSSSQDGKVIVWDSFTTN---------KEHAVTMPCTWVMACAYAPSGCAI 121 (354)
T ss_dssp CEEEEEECCSSCEEEEEECTTS----SEEEEEETTSEEEEEETTTCC---------EEEEEECSSSCCCEEEECTTSSEE
T ss_pred EEEEEecCCCCeEEEEEECCCC----CEEEEEeCCCeEEEEECCCCC---------cceEEecCCCCEEEEEECCCCCEE
Confidence 4567899999999999999854 479999999999999986543 334567789999999999999999
Q ss_pred EEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeC-CCCeEEEEecCCcEEEEE
Q 036314 135 CSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP-QQETIYSASWDHSVRTWD 213 (347)
Q Consensus 135 ~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~l~s~s~dg~v~vwd 213 (347)
++|+.|+++++|++........ ......+.+|...|.++.|+ ++..|++++.|++|++||
T Consensus 122 asg~~d~~i~v~~~~~~~~~~~-------------------~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd 182 (354)
T 2pbi_B 122 ACGGLDNKCSVYPLTFDKNENM-------------------AAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWD 182 (354)
T ss_dssp EEESTTSEEEEEECCCCTTCCS-------------------GGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEE
T ss_pred EEeeCCCCEEEEEEeccccccc-------------------cccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEe
Confidence 9999999999999864321100 11234566799999999984 667899999999999999
Q ss_pred CCCCceeeeeee-CeeeEEEEeeCC-CCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEE
Q 036314 214 VEMGKDLSDIFC-GKALNCIDIGGE-GSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291 (347)
Q Consensus 214 ~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~ 291 (347)
+++++.+..+.. ...+.++++.+. ++.+|++|+.|++|++||++.. .....+.+|...|.+++|+|++. +|++|
T Consensus 183 ~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~---~~~~~~~~h~~~v~~v~~~p~~~-~l~s~ 258 (354)
T 2pbi_B 183 VESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSG---QCVQAFETHESDVNSVRYYPSGD-AFASG 258 (354)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTC---CEEEEECCCSSCEEEEEECTTSS-EEEEE
T ss_pred CCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCC---cEEEEecCCCCCeEEEEEeCCCC-EEEEE
Confidence 999988877764 356888888764 4578999999999999999753 34678889999999999999986 69999
Q ss_pred eCCCcEEEEEcCCCccceeecCC--CCeEEEEeecC-CCEEEEccCCceEEEeecc
Q 036314 292 SYDGKVMLWDLRTAWPLSVIDSH--KDKVLCADWWR-GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 292 s~D~~i~lwd~~~~~~~~~~~~h--~~~v~~~~~~~-~~~l~s~s~D~~v~vw~~~ 344 (347)
+.|++|++||++.+..+..+..+ ...+.+++|++ |.+|++|+.|++|+||+..
T Consensus 259 s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~ 314 (354)
T 2pbi_B 259 SDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVL 314 (354)
T ss_dssp ETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred eCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECC
Confidence 99999999999988766665433 35789999985 7789999999999999863
No 56
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=9e-37 Score=272.80 Aligned_cols=254 Identities=22% Similarity=0.343 Sum_probs=200.2
Q ss_pred eEEEEeeccCCceEEEEE-----eecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeC
Q 036314 55 VCTHILEGHCGAVSSVNI-----IKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAET 129 (347)
Q Consensus 55 ~~~~~l~~h~~~V~~v~~-----~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~ 129 (347)
.+...|.+|.+.|.+++| ++. ++..|+||+.|++|++||+...+... ....+...+.+|..+|.+++|+|
T Consensus 12 ~~~~~l~gH~~~V~~~~~~~s~~~~~---d~~~l~sgs~D~~v~iWd~~~~~~~~--~~~~~~~~l~~h~~~V~~~~~~~ 86 (343)
T 2xzm_R 12 VKRGILEGHSDWVTSIVAGFSQKENE---DSPVLISGSRDKTVMIWKLYEEEQNG--YFGIPHKALTGHNHFVSDLALSQ 86 (343)
T ss_dssp EEEEEEECCSSCEEEEEECCCSSTTC---CCCEEEEEETTSCEEEEEECSSCCSS--BSEEEEEEECCCSSCEEEEEECS
T ss_pred eeeeeeccchhhhhheeeEEEeecCC---CCCEEEEEcCCCEEEEEECCcCCccc--ccccccchhccCCCceEEEEECC
Confidence 356789999999999999 432 33579999999999999987543110 11234567889999999999999
Q ss_pred CCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CCCCeEEEEecCCc
Q 036314 130 SGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHS 208 (347)
Q Consensus 130 ~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~ 208 (347)
++.++++|+.|++|++||+.++ +.+..+.+|...|.+++| |++++|++++.|++
T Consensus 87 ~~~~l~s~s~D~~v~lwd~~~~-------------------------~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~ 141 (343)
T 2xzm_R 87 ENCFAISSSWDKTLRLWDLRTG-------------------------TTYKRFVGHQSEVYSVAFSPDNRQILSAGAERE 141 (343)
T ss_dssp STTEEEEEETTSEEEEEETTSS-------------------------CEEEEEECCCSCEEEEEECSSTTEEEEEETTSC
T ss_pred CCCEEEEEcCCCcEEEEECCCC-------------------------cEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCE
Confidence 9999999999999999998753 335567889999999998 57889999999999
Q ss_pred EEEEECCCCceeeee---eeCeeeEEEEeeCCC---------CcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCee
Q 036314 209 VRTWDVEMGKDLSDI---FCGKALNCIDIGGEG---------SALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWIS 276 (347)
Q Consensus 209 v~vwd~~~~~~~~~~---~~~~~~~~~~~~~~~---------~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~ 276 (347)
|++||+......... .+...+.++.++|.. ..++++++.|+.|++||.. ......+.+|...|.
T Consensus 142 i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~----~~~~~~~~~h~~~v~ 217 (343)
T 2xzm_R 142 IKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN----FQIRYTFKAHESNVN 217 (343)
T ss_dssp EEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT----TEEEEEEECCSSCEE
T ss_pred EEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC----CceeEEEcCccccce
Confidence 999999743222111 123468889987654 2578999999999999953 234567889999999
Q ss_pred EEEeCCCCCeEEEEEeCCCcEEEEEcCCC-ccceeecCCCCeEEEEeecCCCEEEEccCCceEEEeecc
Q 036314 277 ACKWHNKSWFHLISASYDGKVMLWDLRTA-WPLSVIDSHKDKVLCADWWRGDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 277 ~v~~s~~~~~~l~s~s~D~~i~lwd~~~~-~~~~~~~~h~~~v~~~~~~~~~~l~s~s~D~~v~vw~~~ 344 (347)
+++|+|++. +|++|+.|++|++||++.. .+...+ .|...|.+++|+|...+++++.|+.|++|+..
T Consensus 218 ~~~~s~~g~-~l~sgs~dg~v~iwd~~~~~~~~~~~-~~~~~v~~v~~sp~~~~la~~~d~~v~iw~~~ 284 (343)
T 2xzm_R 218 HLSISPNGK-YIATGGKDKKLLIWDILNLTYPQREF-DAGSTINQIAFNPKLQWVAVGTDQGVKIFNLM 284 (343)
T ss_dssp EEEECTTSS-EEEEEETTCEEEEEESSCCSSCSEEE-ECSSCEEEEEECSSSCEEEEEESSCEEEEESS
T ss_pred EEEECCCCC-EEEEEcCCCeEEEEECCCCcccceee-cCCCcEEEEEECCCCCEEEEECCCCEEEEEeC
Confidence 999999986 5999999999999999543 344444 34567999999986666667789999999864
No 57
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.5e-37 Score=280.31 Aligned_cols=293 Identities=16% Similarity=0.231 Sum_probs=226.4
Q ss_pred CcCCceeeccCC-CCC-EEEEEecCCeEEEEcC----C-Ce------EEEEeec----------cCCceEEEEEeecCCC
Q 036314 22 LHDDWVSAVDGS-NPG-FILTGCYDNLGRVWKA----G-GV------CTHILEG----------HCGAVSSVNIIKSDGL 78 (347)
Q Consensus 22 ~h~~~v~~~~~~-~~~-~l~sg~~d~~i~iw~~----~-~~------~~~~l~~----------h~~~V~~v~~~~~~~~ 78 (347)
.|.+.|++++++ ++. +||+|+.|++|++|+. . +. ....+.. |.+.|.+++|+|++
T Consensus 43 ~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-- 120 (425)
T 1r5m_A 43 VKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDG-- 120 (425)
T ss_dssp EECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTS--
T ss_pred eccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCC--
Confidence 566999999998 567 9999999999999998 5 33 2334444 68899999999844
Q ss_pred ceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccc
Q 036314 79 KYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQV 158 (347)
Q Consensus 79 ~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~ 158 (347)
..|++++.||+|++||... +....+.+|..+|.+++|+|++++|++++.|+.|++||+.+......
T Consensus 121 --~~l~~~~~dg~i~i~~~~~----------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~-- 186 (425)
T 1r5m_A 121 --NSIVTGVENGELRLWNKTG----------ALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQH-- 186 (425)
T ss_dssp --SEEEEEETTSCEEEEETTS----------CEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEE--
T ss_pred --CEEEEEeCCCeEEEEeCCC----------CeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEE--
Confidence 3799999999999999432 24556788999999999999999999999999999999876421100
Q ss_pred eeeeccCCCccccccccccccccccCCccceEEEEeCCCCeEEEEecCCcEEEEECCCCceeeeeee-CeeeEEEEeeCC
Q 036314 159 SIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFC-GKALNCIDIGGE 237 (347)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~-~~~~~~~~~~~~ 237 (347)
....... .. .............+.++.|.++..+++++.|+.|++||+++++.+..+.. ...+.+++++++
T Consensus 187 --~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~ 258 (425)
T 1r5m_A 187 --FELKETG---GS---SINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDT 258 (425)
T ss_dssp --ECCC---------------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETT
T ss_pred --eeccccC---cc---ceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCC
Confidence 0000000 00 00000011111226667776667899999999999999998877766643 457889999875
Q ss_pred CCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCe
Q 036314 238 GSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDK 317 (347)
Q Consensus 238 ~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~ 317 (347)
+ .++++++.|+.|++||++.. .....+.+|...|.++.|+|++ +|++++.|+.|++||+++++.+..+..|...
T Consensus 259 ~-~~l~~~~~d~~i~i~d~~~~---~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~ 332 (425)
T 1r5m_A 259 N-KLLLSASDDGTLRIWHGGNG---NSQNCFYGHSQSIVSASWVGDD--KVISCSMDGSVRLWSLKQNTLLALSIVDGVP 332 (425)
T ss_dssp T-TEEEEEETTSCEEEECSSSB---SCSEEECCCSSCEEEEEEETTT--EEEEEETTSEEEEEETTTTEEEEEEECTTCC
T ss_pred C-CEEEEEcCCCEEEEEECCCC---ccceEecCCCccEEEEEECCCC--EEEEEeCCCcEEEEECCCCcEeEecccCCcc
Confidence 4 58889999999999998753 3466778899999999999998 6999999999999999999989999999999
Q ss_pred EEEEeecC-CCEEEEccCCceEEEeecc
Q 036314 318 VLCADWWR-GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 318 v~~~~~~~-~~~l~s~s~D~~v~vw~~~ 344 (347)
|.++.|+| +++|++++.|+.|++|+..
T Consensus 333 i~~~~~s~~~~~l~~~~~dg~i~i~~~~ 360 (425)
T 1r5m_A 333 IFAGRISQDGQKYAVAFMDGQVNVYDLK 360 (425)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEECH
T ss_pred EEEEEEcCCCCEEEEEECCCeEEEEECC
Confidence 99999985 7789999999999999864
No 58
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.8e-36 Score=280.12 Aligned_cols=272 Identities=26% Similarity=0.462 Sum_probs=231.1
Q ss_pred CCCCcCCce-eeccCCCCCEEEEEecCCeEEEEcC-CCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEe
Q 036314 19 EPSLHDDWV-SAVDGSNPGFILTGCYDNLGRVWKA-GGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWK 96 (347)
Q Consensus 19 ~~~~h~~~v-~~~~~~~~~~l~sg~~d~~i~iw~~-~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd 96 (347)
...+|.+.| +++.+ ++++|++|+.||+|++||. .+.+...+.+|.+.|.++.|.+ ..|++++.||+|++||
T Consensus 113 ~l~~h~~~v~~~~~~-~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~------~~l~s~~~dg~i~vwd 185 (445)
T 2ovr_B 113 VLKGHDDHVITCLQF-CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRD------NIIISGSTDRTLKVWN 185 (445)
T ss_dssp EEECSTTSCEEEEEE-ETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEET------TEEEEEETTSCEEEEE
T ss_pred EecccCCCcEEEEEE-cCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEecC------CEEEEEeCCCeEEEEE
Confidence 456888864 66665 4789999999999999997 4788889999999999999973 2699999999999999
Q ss_pred ccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccc
Q 036314 97 FDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEG 176 (347)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (347)
+.+++ ....+.+|...|.+++|+ ++.+++|+.|++|++||+.+.
T Consensus 186 ~~~~~---------~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~------------------------- 229 (445)
T 2ovr_B 186 AETGE---------CIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETG------------------------- 229 (445)
T ss_dssp TTTTE---------EEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSC-------------------------
T ss_pred CCcCc---------EEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCC-------------------------
Confidence 98764 456778999999999985 578999999999999998753
Q ss_pred cccccccCCccceEEEEeCCCCeEEEEecCCcEEEEECCCCceeeeeee-CeeeEEEEeeCCCCcEEEEecCCCcEEEEe
Q 036314 177 EAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFC-GKALNCIDIGGEGSALIAAGGSDPILRIWD 255 (347)
Q Consensus 177 ~~~~~~~~h~~~v~~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~la~~~~d~~i~iwd 255 (347)
+.+..+.+|...|.++.+ +++.+++++.|+.|++||+++++.+..+.. ...+.++.+ ++..+++++.|+.|++||
T Consensus 230 ~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d~~i~i~d 305 (445)
T 2ovr_B 230 QCLHVLMGHVAAVRCVQY-DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF---DGIHVVSGSLDTSIRVWD 305 (445)
T ss_dssp CEEEEEECCSSCEEEEEE-CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE---CSSEEEEEETTSCEEEEE
T ss_pred cEEEEEcCCcccEEEEEE-CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE---CCCEEEEEeCCCeEEEEE
Confidence 234566789999999998 778899999999999999999888777653 346788887 346889999999999999
Q ss_pred CCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecC---CCCeEEEEeecCCCEEEEc
Q 036314 256 PRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDS---HKDKVLCADWWRGDSVISG 332 (347)
Q Consensus 256 ~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~---h~~~v~~~~~~~~~~l~s~ 332 (347)
++.. .....+.+|...+.++.++++ +|++|+.||.|++||+++++.+..+.+ |...|.++.|. +++|++|
T Consensus 306 ~~~~---~~~~~~~~~~~~v~~~~~~~~---~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~s~ 378 (445)
T 2ovr_B 306 VETG---NCIHTLTGHQSLTSGMELKDN---ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN-KNFVITS 378 (445)
T ss_dssp TTTC---CEEEEECCCCSCEEEEEEETT---EEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC-SSEEEEE
T ss_pred CCCC---CEEEEEcCCcccEEEEEEeCC---EEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC-CCEEEEE
Confidence 9753 346788899999999988643 699999999999999999988888876 88999999995 6799999
Q ss_pred cCCceEEEeecc
Q 036314 333 GVDSKLCVSSGV 344 (347)
Q Consensus 333 s~D~~v~vw~~~ 344 (347)
+.||+|+||+..
T Consensus 379 ~~dg~v~iwd~~ 390 (445)
T 2ovr_B 379 SDDGTVKLWDLK 390 (445)
T ss_dssp ETTSEEEEEETT
T ss_pred eCCCeEEEEECC
Confidence 999999999864
No 59
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=8.7e-37 Score=271.68 Aligned_cols=284 Identities=12% Similarity=0.117 Sum_probs=225.5
Q ss_pred CCCCcCCceeeccCC-CCCEEEEEecCCeEEEEcCC-Ce---EEEEeeccCCceEEEEEeecCCCceE-EEEEccCCCcE
Q 036314 19 EPSLHDDWVSAVDGS-NPGFILTGCYDNLGRVWKAG-GV---CTHILEGHCGAVSSVNIIKSDGLKYV-TVATASKDQTL 92 (347)
Q Consensus 19 ~~~~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~-~~---~~~~l~~h~~~V~~v~~~~~~~~~~~-~l~s~s~Dg~v 92 (347)
...+|.+.|++++++ ++.+|++++.|++|++|+.. +. ....+.+|...|.+++|+|++ . .|++++.||+|
T Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----~~~l~~~~~dg~i 81 (342)
T 1yfq_A 6 IEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNT----DLQIYVGTVQGEI 81 (342)
T ss_dssp CSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESS----SEEEEEEETTSCE
T ss_pred cccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCC----CcEEEEEcCCCeE
Confidence 345899999999998 56799999999999999964 32 355677999999999999953 4 68999999999
Q ss_pred EEEec-cccccccCccccceeeeeec--cccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcc
Q 036314 93 RLWKF-DAEELVNHPKKIRSFKILRG--HKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQV 169 (347)
Q Consensus 93 ~~wd~-~~~~~~~~~~~~~~~~~~~~--h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~ 169 (347)
++||+ ..++ ...+.+ |...|.+++|+| ++++++++.|++|++||+....... .
T Consensus 82 ~~wd~~~~~~----------~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~--~----------- 137 (342)
T 1yfq_A 82 LKVDLIGSPS----------FQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGV--I----------- 137 (342)
T ss_dssp EEECSSSSSS----------EEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBC--E-----------
T ss_pred EEEEeccCCc----------eEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEccccccccc--c-----------
Confidence 99998 7653 245678 999999999999 9999999999999999976310000 0
Q ss_pred ccccccccccccccCCccceEEEEeCCCCeEEEEecCCcEEEEECCC-Cceeee-e--eeCeeeEEEEeeCCCCcEEEEe
Q 036314 170 EEPQLEGEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEM-GKDLSD-I--FCGKALNCIDIGGEGSALIAAG 245 (347)
Q Consensus 170 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~dg~v~vwd~~~-~~~~~~-~--~~~~~~~~~~~~~~~~~~la~~ 245 (347)
...++.+..+. |...+.++.|.++. +++++.|+.|++||++. +..... . .....+.++++.+.++..++++
T Consensus 138 ---~~~~~~~~~~~-~~~~v~~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~ 212 (342)
T 1yfq_A 138 ---AVKNLNSNNTK-VKNKIFTMDTNSSR-LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACS 212 (342)
T ss_dssp ---EEEESCSSSSS-SCCCEEEEEECSSE-EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEE
T ss_pred ---cccCCeeeEEe-eCCceEEEEecCCc-EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEE
Confidence 00012233344 77889999986544 99999999999999987 543221 1 2345688999976134688999
Q ss_pred cCCCcEEEEeCCCCCC---CCCeEEecCCCC---------CeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecC
Q 036314 246 GSDPILRIWDPRKPGT---SAPVFQFSSHNS---------WISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDS 313 (347)
Q Consensus 246 ~~d~~i~iwd~~~~~~---~~~~~~~~~h~~---------~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~ 313 (347)
+.|+.|++||++.... ......+..|.. .|.+++|+|++. +|++++.||.|++||+++++.+..+.+
T Consensus 213 ~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~ 291 (342)
T 1yfq_A 213 SIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHK-FLYTAGSDGIISCWNLQTRKKIKNFAK 291 (342)
T ss_dssp ETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTC-CEEEEETTSCEEEEETTTTEEEEECCC
T ss_pred ecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCC-EEEEecCCceEEEEcCccHhHhhhhhc
Confidence 9999999999875410 134667778865 899999999986 599999999999999999998999999
Q ss_pred C-CCeEEEEeecCCCEEEEccCCce
Q 036314 314 H-KDKVLCADWWRGDSVISGGVDSK 337 (347)
Q Consensus 314 h-~~~v~~~~~~~~~~l~s~s~D~~ 337 (347)
| .+.|.+++ .++++|++++.|++
T Consensus 292 ~h~~~v~~~~-~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 292 FNEDSVVKIA-CSDNILCLATSDDT 315 (342)
T ss_dssp CSSSEEEEEE-ECSSEEEEEEECTH
T ss_pred ccCCCceEec-CCCCeEEEEecCCc
Confidence 8 99999999 77889999999998
No 60
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.2e-36 Score=277.68 Aligned_cols=278 Identities=20% Similarity=0.269 Sum_probs=224.3
Q ss_pred CcCCc--eeeccCCCCCEEEEEecCCeEEEEcCC-CeEEEEeec-cCCceEEEEEeecCCCceEEEEEccCCCcEEEEec
Q 036314 22 LHDDW--VSAVDGSNPGFILTGCYDNLGRVWKAG-GVCTHILEG-HCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKF 97 (347)
Q Consensus 22 ~h~~~--v~~~~~~~~~~l~sg~~d~~i~iw~~~-~~~~~~l~~-h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~ 97 (347)
+|.+. +.++++++ +.+++++.|++|++|+.. +.....+.. |...|.+++|+|++ ..|++++.||.|++||+
T Consensus 89 ~~~~~~~~~~~~~s~-~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~----~~l~~~~~dg~i~iwd~ 163 (401)
T 4aez_A 89 GIIDDYYLNLLDWSN-LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDG----SFLSVGLGNGLVDIYDV 163 (401)
T ss_dssp TCCCCTTCBCEEECT-TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTS----SEEEEEETTSCEEEEET
T ss_pred CCcCCceEEEEeecC-CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCC----CEEEEECCCCeEEEEEC
Confidence 44443 33344443 568889999999999975 566666554 88999999999844 37999999999999998
Q ss_pred cccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccccc
Q 036314 98 DAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGE 177 (347)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (347)
.+++ ....+.+|...|.+++| +++.+++|+.|++|++||+.... .
T Consensus 164 ~~~~---------~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~------------------------~ 208 (401)
T 4aez_A 164 ESQT---------KLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIAN------------------------H 208 (401)
T ss_dssp TTCC---------EEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSS------------------------C
T ss_pred cCCe---------EEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCc------------------------c
Confidence 7653 45567899999999999 46799999999999999987421 2
Q ss_pred ccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeee-eCeeeEEEEeeCCCCcEEEEec--CCCcEEE
Q 036314 178 AISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIF-CGKALNCIDIGGEGSALIAAGG--SDPILRI 253 (347)
Q Consensus 178 ~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~la~~~--~d~~i~i 253 (347)
....+.+|...|.++.| +++..|++++.|+.|++||++++..+..+. +...+.++++++.+..++++++ .|+.|++
T Consensus 209 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i 288 (401)
T 4aez_A 209 QIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHF 288 (401)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEE
T ss_pred eeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEE
Confidence 34566789999999998 577899999999999999999988776664 3457899999988888888876 7999999
Q ss_pred EeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEE--EeCCCcEEEEEcCCCccce--eecCCCCeEEEEeecC-CCE
Q 036314 254 WDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLIS--ASYDGKVMLWDLRTAWPLS--VIDSHKDKVLCADWWR-GDS 328 (347)
Q Consensus 254 wd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s--~s~D~~i~lwd~~~~~~~~--~~~~h~~~v~~~~~~~-~~~ 328 (347)
||++.. .....+. |...|.+++|+|++.. |++ |+.|+.|++||++++.... .+.+|.+.|.+++|+| |.+
T Consensus 289 ~d~~~~---~~~~~~~-~~~~v~~~~~s~~~~~-l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~ 363 (401)
T 4aez_A 289 WNAATG---ARVNTVD-AGSQVTSLIWSPHSKE-IMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRI 363 (401)
T ss_dssp EETTTC---CEEEEEE-CSSCEEEEEECSSSSE-EEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSE
T ss_pred EECCCC---CEEEEEe-CCCcEEEEEECCCCCe-EEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCE
Confidence 999753 2345553 6678999999999975 666 4489999999999865443 4679999999999985 778
Q ss_pred EEEccCCceEEEeecc
Q 036314 329 VISGGVDSKLCVSSGV 344 (347)
Q Consensus 329 l~s~s~D~~v~vw~~~ 344 (347)
|++++.|++|++|+..
T Consensus 364 l~s~~~dg~i~iw~~~ 379 (401)
T 4aez_A 364 LSTAASDENLKFWRVY 379 (401)
T ss_dssp EEEECTTSEEEEEECC
T ss_pred EEEEeCCCcEEEEECC
Confidence 9999999999999864
No 61
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=3.6e-36 Score=275.48 Aligned_cols=298 Identities=18% Similarity=0.241 Sum_probs=219.8
Q ss_pred CceeeccCC-CCCEEEEEecCCeEEEEcCC-CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEecccccc
Q 036314 25 DWVSAVDGS-NPGFILTGCYDNLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEEL 102 (347)
Q Consensus 25 ~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~-~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~ 102 (347)
..+....++ ++.+||+|+.|++|++||.. +.+...+.+|.+.|.+++|+|++ ..|++++.|++|++||+..++
T Consensus 98 ~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~----~~l~s~s~d~~i~iwd~~~~~- 172 (420)
T 3vl1_A 98 DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSG----EALISSSQDMQLKIWSVKDGS- 172 (420)
T ss_dssp CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTS----SEEEEEETTSEEEEEETTTCC-
T ss_pred CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCC----CEEEEEeCCCeEEEEeCCCCc-
Confidence 334443455 56799999999999999975 56677788999999999999854 379999999999999997654
Q ss_pred ccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccC--CCcccccc-cccccc
Q 036314 103 VNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKG--NNQVEEPQ-LEGEAI 179 (347)
Q Consensus 103 ~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~ 179 (347)
....+.+|..+|.+++|+|++++|++++.|++|++||+.+...... ..... ...+.... ......
T Consensus 173 --------~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~ 240 (420)
T 3vl1_A 173 --------NPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHT----FNRKENPHDGVNSIALFVGTDR 240 (420)
T ss_dssp --------CCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEE----ECBTTBTTCCEEEEEEEECCCS
T ss_pred --------CceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEE----eecCCCCCCCccEEEEecCCcc
Confidence 3456789999999999999999999999999999999876432100 00000 00000000 000000
Q ss_pred ccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeeee--CeeeEEEEeeCCCCcEEEEecCCCcEEEEeC
Q 036314 180 STLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFC--GKALNCIDIGGEGSALIAAGGSDPILRIWDP 256 (347)
Q Consensus 180 ~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~ 256 (347)
.....+...+.+++| ++++.|++++.||.|++||+++++.+..+.. ...+.++++++++..++++|+.|+.|++||+
T Consensus 241 ~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~ 320 (420)
T 3vl1_A 241 QLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDL 320 (420)
T ss_dssp SCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEET
T ss_pred eeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEc
Confidence 011223445555666 5677899999999999999999887766653 3468999998877658999999999999999
Q ss_pred CCCCCCCCeEEecC-CCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCc---------cceeecCCCCeEEEEeecC-
Q 036314 257 RKPGTSAPVFQFSS-HNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAW---------PLSVIDSHKDKVLCADWWR- 325 (347)
Q Consensus 257 ~~~~~~~~~~~~~~-h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~---------~~~~~~~h~~~v~~~~~~~- 325 (347)
+.... ++..+.+ |...|.++.+. ++ .+|++++.|++|++||+.... ....+.+|.+.|.+++|+|
T Consensus 321 ~~~~~--~~~~~~~~~~~~v~~~~~~-~~-~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 396 (420)
T 3vl1_A 321 RSPEC--PVGEFLINEGTPINNVYFA-AG-ALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSD 396 (420)
T ss_dssp TCTTS--CSEEEEESTTSCEEEEEEE-TT-EEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECC
T ss_pred CCCcC--chhhhhccCCCCceEEEeC-CC-CEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccC
Confidence 86432 3455655 66677777664 55 479999999999999998742 2234567889999999975
Q ss_pred CC---EEEEccCCceEEEeec
Q 036314 326 GD---SVISGGVDSKLCVSSG 343 (347)
Q Consensus 326 ~~---~l~s~s~D~~v~vw~~ 343 (347)
+. .|++++.+|.+.+|+.
T Consensus 397 ~~~~g~l~a~g~~g~~~~~~~ 417 (420)
T 3vl1_A 397 DESNGEVLEVGKNNFCALYNL 417 (420)
T ss_dssp SSSSCEEEEEETTTEEEEEES
T ss_pred CCCcceEEEEcCCceEEEEec
Confidence 55 5788888999999985
No 62
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=6.6e-36 Score=276.37 Aligned_cols=272 Identities=26% Similarity=0.445 Sum_probs=230.3
Q ss_pred CCCcCCceeeccCCCCCEEEEEecCCeEEEEcCC-CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEecc
Q 036314 20 PSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFD 98 (347)
Q Consensus 20 ~~~h~~~v~~~~~~~~~~l~sg~~d~~i~iw~~~-~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~ 98 (347)
..+|...|++++++ +++|++|+.|++|++||.. +.+...+.+|...|.++.|.+ ..|++++.||+|++||+.
T Consensus 155 ~~~h~~~v~~~~~~-~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~------~~l~s~s~dg~i~~wd~~ 227 (445)
T 2ovr_B 155 LVGHTGGVWSSQMR-DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE------KRVVSGSRDATLRVWDIE 227 (445)
T ss_dssp CCCCSSCEEEEEEE-TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEET------TEEEEEETTSEEEEEESS
T ss_pred EcCCCCCEEEEEec-CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEecC------CEEEEEeCCCEEEEEECC
Confidence 55899999999986 6799999999999999974 778889999999999999864 258999999999999997
Q ss_pred ccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccc
Q 036314 99 AEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEA 178 (347)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (347)
+++ ....+.+|..+|.+++| +++++++|+.|++|++||+.+. +.
T Consensus 228 ~~~---------~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~-------------------------~~ 271 (445)
T 2ovr_B 228 TGQ---------CLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETE-------------------------TC 271 (445)
T ss_dssp SCC---------EEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGT-------------------------EE
T ss_pred CCc---------EEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCC-------------------------cE
Confidence 654 45677899999999998 7889999999999999998643 34
Q ss_pred cccccCCccceEEEEeCCCCeEEEEecCCcEEEEECCCCceeeeeeeC-eeeEEEEeeCCCCcEEEEecCCCcEEEEeCC
Q 036314 179 ISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCG-KALNCIDIGGEGSALIAAGGSDPILRIWDPR 257 (347)
Q Consensus 179 ~~~~~~h~~~v~~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~ 257 (347)
+..+.+|...|.++.| ++..+++++.|+.|++||+++++.+..+..+ ..+.++.+. +..+++++.|+.|++||++
T Consensus 272 ~~~~~~~~~~v~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~dg~i~vwd~~ 347 (445)
T 2ovr_B 272 LHTLQGHTNRVYSLQF-DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK---DNILVSGNADSTVKIWDIK 347 (445)
T ss_dssp EEEECCCSSCEEEEEE-CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEE---TTEEEEEETTSCEEEEETT
T ss_pred eEEecCCCCceEEEEE-CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEe---CCEEEEEeCCCeEEEEECC
Confidence 5567789999999998 7789999999999999999999887776543 345666663 3488999999999999997
Q ss_pred CCCCCCCeEEecC---CCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceee-----cCCCCeEEEEeecC-CCE
Q 036314 258 KPGTSAPVFQFSS---HNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVI-----DSHKDKVLCADWWR-GDS 328 (347)
Q Consensus 258 ~~~~~~~~~~~~~---h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~-----~~h~~~v~~~~~~~-~~~ 328 (347)
.. .....+.+ |...|.+++|++ .+|++|+.||.|++||+++++.+..+ .+|.+.|++++|+| +..
T Consensus 348 ~~---~~~~~~~~~~~~~~~v~~~~~~~---~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 421 (445)
T 2ovr_B 348 TG---QCLQTLQGPNKHQSAVTCLQFNK---NFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLV 421 (445)
T ss_dssp TC---CEEEEECSTTSCSSCEEEEEECS---SEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEE
T ss_pred CC---cEEEEEccCCCCCCCEEEEEECC---CEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEE
Confidence 53 33566665 888999999974 36999999999999999999888877 47889999999986 556
Q ss_pred EEEccCCce----EEEeecc
Q 036314 329 VISGGVDSK----LCVSSGV 344 (347)
Q Consensus 329 l~s~s~D~~----v~vw~~~ 344 (347)
||+|+.||+ |.||+-.
T Consensus 422 la~~~~dg~~~~~l~v~df~ 441 (445)
T 2ovr_B 422 CAVGSRNGTEETKLLVLDFD 441 (445)
T ss_dssp EEEECSSSSSCCEEEEEECC
T ss_pred EEEcccCCCCccEEEEEECC
Confidence 899999998 9999864
No 63
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.1e-36 Score=280.87 Aligned_cols=297 Identities=14% Similarity=0.251 Sum_probs=219.4
Q ss_pred CCCCcCCceeeccCC-CCCEEEEEecCCeEEEEcCCC-e-----------EEEEeeccC------------CceEEEEEe
Q 036314 19 EPSLHDDWVSAVDGS-NPGFILTGCYDNLGRVWKAGG-V-----------CTHILEGHC------------GAVSSVNII 73 (347)
Q Consensus 19 ~~~~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~~-~-----------~~~~l~~h~------------~~V~~v~~~ 73 (347)
....|.+.|++++|+ ++.+||+|+.||+|++|+... . +...+.+|. +.|.+++|+
T Consensus 23 ~~~~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~ 102 (447)
T 3dw8_B 23 DDVAEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWL 102 (447)
T ss_dssp SCCCGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEEC
T ss_pred ccccccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEc
Confidence 345688999999998 567999999999999999652 2 477899998 889999999
Q ss_pred ecCCCceEEEEEccCCCcEEEEeccccccccCc----------------c--------------ccceeee-eeccccce
Q 036314 74 KSDGLKYVTVATASKDQTLRLWKFDAEELVNHP----------------K--------------KIRSFKI-LRGHKASV 122 (347)
Q Consensus 74 ~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~----------------~--------------~~~~~~~-~~~h~~~V 122 (347)
|+++. ..|++++.|++|++||+..++..... . ...+... +.+|...|
T Consensus 103 ~~~~~--~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 180 (447)
T 3dw8_B 103 PQKNA--AQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHI 180 (447)
T ss_dssp CCCSS--SEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCC
T ss_pred CCCCc--ceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcce
Confidence 86421 36899999999999998764321000 0 0001112 36899999
Q ss_pred EEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeC-CC-CeE
Q 036314 123 HSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP-QQ-ETI 200 (347)
Q Consensus 123 ~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~-~~l 200 (347)
.+++|+|++++|++| .|++|++||+..... ..... ......+.+|...|.+++|. ++ ..|
T Consensus 181 ~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~---~~~~~--------------~~~~~~~~~~~~~v~~~~~~p~~~~~l 242 (447)
T 3dw8_B 181 NSISINSDYETYLSA-DDLRINLWHLEITDR---SFNIV--------------DIKPANMEELTEVITAAEFHPNSCNTF 242 (447)
T ss_dssp CEEEECTTSSEEEEE-CSSEEEEEETTEEEE---EEEEE--------------ECCCSSGGGCCCCEEEEEECSSCTTEE
T ss_pred EEEEEcCCCCEEEEe-CCCeEEEEECCCCCc---eeeee--------------ecccccccccCcceEEEEECCCCCcEE
Confidence 999999999999998 899999999873210 00000 00011466799999999994 55 789
Q ss_pred EEEecCCcEEEEECCCCce----eeeeeeCe-------------eeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCC
Q 036314 201 YSASWDHSVRTWDVEMGKD----LSDIFCGK-------------ALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSA 263 (347)
Q Consensus 201 ~s~s~dg~v~vwd~~~~~~----~~~~~~~~-------------~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~ 263 (347)
++++.||+|++||+++++. +..+..+. .+.+++++++ +.++++++. +.|++||++... .
T Consensus 243 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-g~~l~~~~~-~~v~iwd~~~~~--~ 318 (447)
T 3dw8_B 243 VYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHS-GRYMMTRDY-LSVKVWDLNMEN--R 318 (447)
T ss_dssp EEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTT-SSEEEEEES-SEEEEEETTCCS--S
T ss_pred EEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCC-CCEEEEeeC-CeEEEEeCCCCc--c
Confidence 9999999999999998875 44444332 6889999774 567888888 999999998532 2
Q ss_pred CeEEecCCCCCe---------------eEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeec----------------
Q 036314 264 PVFQFSSHNSWI---------------SACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVID---------------- 312 (347)
Q Consensus 264 ~~~~~~~h~~~v---------------~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~---------------- 312 (347)
++..+.+|...+ ..++|+|++. +|++|+.|+.|++||+++++.+ .+.
T Consensus 319 ~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~-~l~s~s~dg~v~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~ 396 (447)
T 3dw8_B 319 PVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDS-VVMTGSYNNFFRMFDRNTKRDI-TLEASRENNKPRTVLKPRK 396 (447)
T ss_dssp CSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSS-EEEEECSTTEEEEEETTTCCEE-EEECCSTTCCTTCBCCCCC
T ss_pred ccceeeccccccccccccccccccccceEEEECCCCC-EEEEeccCCEEEEEEcCCCcce-eeeecccccccccccCCcc
Confidence 355677776422 2389999986 5899999999999999987643 222
Q ss_pred -----------------CCCCeEEEEeecC-CCEEEEccCCceEEEee
Q 036314 313 -----------------SHKDKVLCADWWR-GDSVISGGVDSKLCVSS 342 (347)
Q Consensus 313 -----------------~h~~~v~~~~~~~-~~~l~s~s~D~~v~vw~ 342 (347)
.+...|+.++|+| +++||+++.|+ +.+|.
T Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~-~~~~~ 443 (447)
T 3dw8_B 397 VCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNN-LYIFQ 443 (447)
T ss_dssp EECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSC-EEEEE
T ss_pred ccccCCcccccccccccccCCceeEEEECCCCCEEEEEecce-eeeec
Confidence 2345788999986 67888888776 66775
No 64
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.1e-35 Score=276.05 Aligned_cols=299 Identities=19% Similarity=0.310 Sum_probs=232.0
Q ss_pred CCCCcCCce-eeccCCCCCEEEEEecCCeEEEEcC-CCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEe
Q 036314 19 EPSLHDDWV-SAVDGSNPGFILTGCYDNLGRVWKA-GGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWK 96 (347)
Q Consensus 19 ~~~~h~~~v-~~~~~~~~~~l~sg~~d~~i~iw~~-~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd 96 (347)
...+|.+.| +++.+ ++++|+||+.||+|++||. .+.++..+.+|.+.|.+++|++++ .|++|+.||+|++||
T Consensus 116 ~l~~h~~~v~~~~~~-~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-----~l~s~s~dg~i~vwd 189 (464)
T 3v7d_B 116 TLRGHMTSVITCLQF-EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-----ILVSGSTDRTVRVWD 189 (464)
T ss_dssp EEECCSSSCEEEEEE-ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-----EEEEEETTSCEEEEE
T ss_pred EEcCCCCCcEEEEEE-CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-----EEEEEeCCCCEEEEE
Confidence 345788774 66666 5679999999999999996 477888999999999999998743 689999999999999
Q ss_pred ccccccccCccccceeeeeeccccceEEEEEe--CCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccc
Q 036314 97 FDAEELVNHPKKIRSFKILRGHKASVHSIAAE--TSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQL 174 (347)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s--~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (347)
+.+++ ....+.+|..+|.+++|+ ++++++++|+.|++|++||+.+.......... .........+..
T Consensus 190 ~~~~~---------~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~--~~~~~~~~~~~~ 258 (464)
T 3v7d_B 190 IKKGC---------CTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEE--HDYPLVFHTPEE 258 (464)
T ss_dssp TTTTE---------EEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC--------CCSSEEESCGGG
T ss_pred CCCCc---------EEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCccccccccc--CCcceEeeccCC
Confidence 98664 456788999999999998 57899999999999999999865422110000 000000000001
Q ss_pred cccccccccCCccceEEEEeCCCCeEEEEecCCcEEEEECCCCceeeeeee-CeeeEEEEeeCCCCcEEEEecCCCcEEE
Q 036314 175 EGEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFC-GKALNCIDIGGEGSALIAAGGSDPILRI 253 (347)
Q Consensus 175 ~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~la~~~~d~~i~i 253 (347)
.......+.+|...+.++. ++++.+++++.|++|++||+++++.+..+.. ...+.++.++++ +..+++|+.|+.|++
T Consensus 259 ~~~~~~~~~~~~~~v~~~~-~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~sg~~dg~i~v 336 (464)
T 3v7d_B 259 NPYFVGVLRGHMASVRTVS-GHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHE-RKRCISASMDTTIRI 336 (464)
T ss_dssp CTTEEEEECCCSSCEEEEE-EETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETT-TTEEEEEETTSCEEE
T ss_pred CeEEEEEccCccceEEEEc-CCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCC-CCEEEEEeCCCcEEE
Confidence 1123456788998888885 5678999999999999999999888777653 457889999775 457889999999999
Q ss_pred EeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeec-CCCEEEEc
Q 036314 254 WDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWW-RGDSVISG 332 (347)
Q Consensus 254 wd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~-~~~~l~s~ 332 (347)
||++.. ..+..+.+|...|.++.|++ .+|++++.||+|++||++++.....+ .|...+..+.|+ ++++|+++
T Consensus 337 wd~~~~---~~~~~~~~h~~~v~~~~~~~---~~l~s~s~dg~v~vwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~ 409 (464)
T 3v7d_B 337 WDLENG---ELMYTLQGHTALVGLLRLSD---KFLVSAAADGSIRGWDANDYSRKFSY-HHTNLSAITTFYVSDNILVSG 409 (464)
T ss_dssp EETTTT---EEEEEECCCSSCEEEEEECS---SEEEEEETTSEEEEEETTTCCEEEEE-ECTTCCCEEEEEECSSEEEEE
T ss_pred EECCCC---cEEEEEeCCCCcEEEEEEcC---CEEEEEeCCCcEEEEECCCCceeeee-cCCCCccEEEEEeCCCEEEEe
Confidence 999753 35778899999999999984 36999999999999999987655544 355667777886 46678888
Q ss_pred cCCceEEEeecc
Q 036314 333 GVDSKLCVSSGV 344 (347)
Q Consensus 333 s~D~~v~vw~~~ 344 (347)
+ |++|+||+..
T Consensus 410 ~-dg~i~iwd~~ 420 (464)
T 3v7d_B 410 S-ENQFNIYNLR 420 (464)
T ss_dssp E-TTEEEEEETT
T ss_pred c-CCeEEEEECC
Confidence 7 9999999865
No 65
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.7e-36 Score=299.97 Aligned_cols=307 Identities=14% Similarity=0.151 Sum_probs=217.4
Q ss_pred CCcCCceeeccCC-CCCEEEEEecCCeEEEEcCCCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccc
Q 036314 21 SLHDDWVSAVDGS-NPGFILTGCYDNLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDA 99 (347)
Q Consensus 21 ~~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~ 99 (347)
.+|.+.|++++|+ ++.+||+|+.||+|++|+..+........|...|.+++|+| +. +|++++.|++|++||+.+
T Consensus 14 ~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~----~L~S~s~D~~v~lWd~~~ 88 (902)
T 2oaj_A 14 YGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GI----YLVVINAKDTVYVLSLYS 88 (902)
T ss_dssp EECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEET-TT----EEEEEETTCEEEEEETTT
T ss_pred cCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CC----EEEEEECcCeEEEEECCC
Confidence 4899999999998 46799999999999999986544333445888999999998 32 699999999999999987
Q ss_pred cccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCC---------------c--cc-eee
Q 036314 100 EELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAG---------------N--QV-SIK 161 (347)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~---------------~--~~-~~~ 161 (347)
++ .+..+. |...|++++|+|+++++++|+.||+|++||+.+..... . .+ .+.
T Consensus 89 ~~---------~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~ 158 (902)
T 2oaj_A 89 QK---------VLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQ 158 (902)
T ss_dssp CS---------EEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEE
T ss_pred Cc---------EEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEE
Confidence 64 334443 67889999999999999999999999999997653210 0 00 000
Q ss_pred ecc----------CCCccccccc-ccccccccc------------------CCccceEEEEe-CCCCeEEEEecCCcEEE
Q 036314 162 KRK----------GNNQVEEPQL-EGEAISTLV------------------GHTQCVSSVVW-PQQETIYSASWDHSVRT 211 (347)
Q Consensus 162 ~~~----------~~~~~~~~~~-~~~~~~~~~------------------~h~~~v~~~~~-~~~~~l~s~s~dg~v~v 211 (347)
..+ ....+ .... .+..+..+. .|...|.+++| |++.+|++++.|++|++
T Consensus 159 ~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~l 237 (902)
T 2oaj_A 159 WNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVF 237 (902)
T ss_dssp EETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEE
T ss_pred EccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEE
Confidence 000 00000 0000 112222333 34578999999 57889999999999999
Q ss_pred EECCCCceeee--ee-----------------eCeeeEEEEee-------------------------------------
Q 036314 212 WDVEMGKDLSD--IF-----------------CGKALNCIDIG------------------------------------- 235 (347)
Q Consensus 212 wd~~~~~~~~~--~~-----------------~~~~~~~~~~~------------------------------------- 235 (347)
||+++++.+.. +. ....+.+++|.
T Consensus 238 Wd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~ 317 (902)
T 2oaj_A 238 WDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYS 317 (902)
T ss_dssp EETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGG
T ss_pred EECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCcc
Confidence 99976654321 00 00000000000
Q ss_pred --------------------------------------------------------------------------------
Q 036314 236 -------------------------------------------------------------------------------- 235 (347)
Q Consensus 236 -------------------------------------------------------------------------------- 235 (347)
T Consensus 318 ~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l 397 (902)
T 2oaj_A 318 ITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNL 397 (902)
T ss_dssp GCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGG
T ss_pred ccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcc
Confidence
Q ss_pred ----------------------------------------------CCCCcEEEEecCCCcEEEEeCCCCCCCC-CeEE-
Q 036314 236 ----------------------------------------------GEGSALIAAGGSDPILRIWDPRKPGTSA-PVFQ- 267 (347)
Q Consensus 236 ----------------------------------------------~~~~~~la~~~~d~~i~iwd~~~~~~~~-~~~~- 267 (347)
.+++.++++|+.|++|++||+....... ....
T Consensus 398 ~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~ 477 (902)
T 2oaj_A 398 SWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEV 477 (902)
T ss_dssp TTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEE
T ss_pred cccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEe
Confidence 0123467888888888888876532110 1112
Q ss_pred -ec-----CCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCc-----------------------------------
Q 036314 268 -FS-----SHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAW----------------------------------- 306 (347)
Q Consensus 268 -~~-----~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~----------------------------------- 306 (347)
+. +|...|.+++|+|++. +||+|+.|++|+|||+.+++
T Consensus 478 ~l~~~~~~~h~~~V~svafspdg~-~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 556 (902)
T 2oaj_A 478 NLSRTLNKAKELAVDKISFAAETL-ELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDR 556 (902)
T ss_dssp EHHHHTTCSSSCCEEEEEEETTTT-EEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGG
T ss_pred echhhcCCCCCCceeEEEecCCCC-eEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCcccccccccc
Confidence 12 7889999999999996 59999999999999998662
Q ss_pred ----------cceeecCCCCeEEEEeecCCCEEEEccCCceEEEeecc
Q 036314 307 ----------PLSVIDSHKDKVLCADWWRGDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 307 ----------~~~~~~~h~~~v~~~~~~~~~~l~s~s~D~~v~vw~~~ 344 (347)
++.++.+|.+.|++++|+|+.+||+|+.|++|+||+..
T Consensus 557 ~~~~~~~g~~~~~~l~~h~~~V~svafSpdG~lAsgs~D~tv~lwd~~ 604 (902)
T 2oaj_A 557 APTGVRQGFMPSTAVHANKGKTSAINNSNIGFVGIAYAAGSLMLIDRR 604 (902)
T ss_dssp CCTTCSEEEEEEEEECCCSCSEEEEEECBTSEEEEEETTSEEEEEETT
T ss_pred CCCCCCCccceeEEEEcCCCcEEEEEecCCcEEEEEeCCCcEEEEECC
Confidence 25678899999999999864499999999999999953
No 66
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=5.1e-36 Score=272.92 Aligned_cols=291 Identities=20% Similarity=0.286 Sum_probs=214.8
Q ss_pred CCCCcCCceeeccCC-CC----CEEEEEecCCeEEEEcCCCe-----EEEEeeccCCceEEEEEeecCCCceEEEEEccC
Q 036314 19 EPSLHDDWVSAVDGS-NP----GFILTGCYDNLGRVWKAGGV-----CTHILEGHCGAVSSVNIIKSDGLKYVTVATASK 88 (347)
Q Consensus 19 ~~~~h~~~v~~~~~~-~~----~~l~sg~~d~~i~iw~~~~~-----~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~ 88 (347)
....|...|..+... +. ..+.-.+.+ ...+|+.... .+....+|.+.|.+++|+|++ .+|++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fspdg----~~la~g~- 83 (393)
T 1erj_A 10 QRANHSKPIPPFLLDLDSQSVPDALKKQTND-YYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDG----EYLATGC- 83 (393)
T ss_dssp SSSCTTCCCCHHHHCCCSSSSCTTSEEECSS-CEEEECTTSCCCEEEEEEEEEECSSCCCEEEECTTS----SEEEEEC-
T ss_pred ccccccccCCCccccCChhHCcHhHhccCCc-eEEEECCCCCcccCceeEEecCCCCEEEEEEECCCC----CEEEEEc-
Confidence 345566666644322 11 112333333 3457875321 122233699999999999954 3688876
Q ss_pred CCcEEEEeccccccccCccc-------ccee--eeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccce
Q 036314 89 DQTLRLWKFDAEELVNHPKK-------IRSF--KILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVS 159 (347)
Q Consensus 89 Dg~v~~wd~~~~~~~~~~~~-------~~~~--~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~ 159 (347)
|+++++|++.+++....... ...+ .....+...|.+++|+|+|++|++|+.|++|++||+.+.
T Consensus 84 ~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~-------- 155 (393)
T 1erj_A 84 NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENR-------- 155 (393)
T ss_dssp BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTT--------
T ss_pred CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEEcCCCeEEEEECCCC--------
Confidence 68999999987653211000 0000 001123345999999999999999999999999998753
Q ss_pred eeeccCCCccccccccccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCC
Q 036314 160 IKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEG 238 (347)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (347)
+.+..+.+|...|.++.| |+++.|++++.|++|++||+++++....+.....+.++++++.+
T Consensus 156 -----------------~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~ 218 (393)
T 1erj_A 156 -----------------KIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGD 218 (393)
T ss_dssp -----------------EEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTT
T ss_pred -----------------cEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEEECCC
Confidence 335567889999999998 57889999999999999999999887777666778899998867
Q ss_pred CcEEEEecCCCcEEEEeCCCCCCCCCeEEe-------cCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCC------
Q 036314 239 SALIAAGGSDPILRIWDPRKPGTSAPVFQF-------SSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTA------ 305 (347)
Q Consensus 239 ~~~la~~~~d~~i~iwd~~~~~~~~~~~~~-------~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~------ 305 (347)
+.++++|+.|+.|++||++... ....+ .+|...|.+++|+|++. +|++|+.|++|++||+++.
T Consensus 219 ~~~l~~~s~d~~v~iwd~~~~~---~~~~~~~~~~~~~~h~~~v~~v~~~~~g~-~l~s~s~d~~v~~wd~~~~~~~~~~ 294 (393)
T 1erj_A 219 GKYIAAGSLDRAVRVWDSETGF---LVERLDSENESGTGHKDSVYSVVFTRDGQ-SVVSGSLDRSVKLWNLQNANNKSDS 294 (393)
T ss_dssp CCEEEEEETTSCEEEEETTTCC---EEEEEC------CCCSSCEEEEEECTTSS-EEEEEETTSEEEEEEC---------
T ss_pred CCEEEEEcCCCcEEEEECCCCc---EEEeecccccCCCCCCCCEEEEEECCCCC-EEEEEeCCCEEEEEECCCCCCcccc
Confidence 7899999999999999987532 22333 57999999999999986 5999999999999999763
Q ss_pred ------ccceeecCCCCeEEEEeecC-CCEEEEccCCceEEEeecc
Q 036314 306 ------WPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 306 ------~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~D~~v~vw~~~ 344 (347)
.....+.+|.+.|.+++|++ +.+|++|+.|++|++|+..
T Consensus 295 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~ 340 (393)
T 1erj_A 295 KTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKK 340 (393)
T ss_dssp ------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETT
T ss_pred cCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECC
Confidence 23456789999999999975 7789999999999999854
No 67
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=7e-36 Score=295.73 Aligned_cols=283 Identities=22% Similarity=0.305 Sum_probs=237.9
Q ss_pred CCCcCCceeeccCCC-CCEEEEEecCCeEEEEcC-CCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEec
Q 036314 20 PSLHDDWVSAVDGSN-PGFILTGCYDNLGRVWKA-GGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKF 97 (347)
Q Consensus 20 ~~~h~~~v~~~~~~~-~~~l~sg~~d~~i~iw~~-~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~ 97 (347)
..+|.+.|+++++++ +.+||+|+.||+|++||. .+.....+.+|.+.|.+++|+|++ ..|++++.||+|++||+
T Consensus 9 ~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~----~~l~~~~~dg~i~vw~~ 84 (814)
T 3mkq_A 9 FSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARK----NWIIVGSDDFRIRVFNY 84 (814)
T ss_dssp EEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGG----TEEEEEETTSEEEEEET
T ss_pred eecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCC----CEEEEEeCCCeEEEEEC
Confidence 458999999999984 669999999999999996 577888999999999999999954 37999999999999999
Q ss_pred cccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccccc
Q 036314 98 DAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGE 177 (347)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (347)
.+++ ....+.+|...|.+++|+|++++|++++.|++|++||+.+.. .
T Consensus 85 ~~~~---------~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~------------------------~ 131 (814)
T 3mkq_A 85 NTGE---------KVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNW------------------------A 131 (814)
T ss_dssp TTCC---------EEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTS------------------------E
T ss_pred CCCc---------EEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCc------------------------e
Confidence 8664 455678999999999999999999999999999999986421 2
Q ss_pred ccccccCCccceEEEEeC--CCCeEEEEecCCcEEEEECCCCceeeeeeeC--eeeEEEEeeC-CCCcEEEEecCCCcEE
Q 036314 178 AISTLVGHTQCVSSVVWP--QQETIYSASWDHSVRTWDVEMGKDLSDIFCG--KALNCIDIGG-EGSALIAAGGSDPILR 252 (347)
Q Consensus 178 ~~~~~~~h~~~v~~~~~~--~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~la~~~~d~~i~ 252 (347)
....+.+|...|.++.|. ++..|++++.||+|++||++.+.....+... ..+.++++.+ +++..+++++.|+.|+
T Consensus 132 ~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~ 211 (814)
T 3mkq_A 132 LEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIK 211 (814)
T ss_dssp EEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEE
T ss_pred EEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEE
Confidence 344667899999999984 5678999999999999999887766655533 5678888876 2556889999999999
Q ss_pred EEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeecCC-CE-EE
Q 036314 253 IWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRG-DS-VI 330 (347)
Q Consensus 253 iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~~-~~-l~ 330 (347)
+||++.. .....+.+|...|.+++|+|++. +|++++.||.|++||+++++.+..+..|.+.+++++|+|. .. ++
T Consensus 212 ~~d~~~~---~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 287 (814)
T 3mkq_A 212 IWDYQTK---SCVATLEGHMSNVSFAVFHPTLP-IIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYI 287 (814)
T ss_dssp EEETTTT---EEEEEEECCSSCEEEEEECSSSS-EEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEE
T ss_pred EEECCCC---cEEEEEcCCCCCEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEE
Confidence 9998753 34677889999999999999986 6999999999999999999989999999999999999864 42 34
Q ss_pred EccCCceEEEeec
Q 036314 331 SGGVDSKLCVSSG 343 (347)
Q Consensus 331 s~s~D~~v~vw~~ 343 (347)
+++.|+.+.+|+.
T Consensus 288 ~~~~~~~~~~~~~ 300 (814)
T 3mkq_A 288 ASGFDNGFTVLSL 300 (814)
T ss_dssp EEEETTEEEEEEC
T ss_pred EEEeCCCEEEEEc
Confidence 4455666777763
No 68
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=2e-35 Score=274.28 Aligned_cols=284 Identities=26% Similarity=0.456 Sum_probs=229.5
Q ss_pred CCCcCCceeeccCCCCCEEEEEecCCeEEEEcCC-CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEecc
Q 036314 20 PSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFD 98 (347)
Q Consensus 20 ~~~h~~~v~~~~~~~~~~l~sg~~d~~i~iw~~~-~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~ 98 (347)
..+|.+.|++++++++++|++|+.|++|++||.. +.+...+.+|.+.|.+++|.+.. +...|++++.|++|++||+.
T Consensus 158 ~~~h~~~V~~l~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~--~~~~l~s~s~d~~i~vwd~~ 235 (464)
T 3v7d_B 158 LSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYK--NIKYIVTGSRDNTLHVWKLP 235 (464)
T ss_dssp ECCCSSCEEEEEECSTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESS--SCEEEEEEETTSCEEEEECC
T ss_pred EeCCCcCEEEEEEcCCCEEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCC--CCCEEEEEcCCCcEEEeeCC
Confidence 4489999999999877799999999999999974 77888999999999999998643 33579999999999999998
Q ss_pred ccccccCc--------------cccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeecc
Q 036314 99 AEELVNHP--------------KKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRK 164 (347)
Q Consensus 99 ~~~~~~~~--------------~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~ 164 (347)
..+..... ........+.+|...|.++ +++++++++|+.|++|++||+.+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~------------- 300 (464)
T 3v7d_B 236 KESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQM------------- 300 (464)
T ss_dssp CCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTT-------------
T ss_pred CCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCC-------------
Confidence 66432110 0111355678999999887 577899999999999999998753
Q ss_pred CCCccccccccccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeeee-CeeeEEEEeeCCCCcEE
Q 036314 165 GNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFC-GKALNCIDIGGEGSALI 242 (347)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l 242 (347)
+.+..+.+|...|.++.| ++++.+++++.|++|++||+++++.+..+.. ...+.++.++ +..+
T Consensus 301 ------------~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~---~~~l 365 (464)
T 3v7d_B 301 ------------KCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS---DKFL 365 (464)
T ss_dssp ------------EEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC---SSEE
T ss_pred ------------cEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc---CCEE
Confidence 345567789999999998 6788999999999999999999988877754 3467888885 3588
Q ss_pred EEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCcccee-ecCCCCeEEEE
Q 036314 243 AAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSV-IDSHKDKVLCA 321 (347)
Q Consensus 243 a~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~-~~~h~~~v~~~ 321 (347)
++++.|+.|++||++... ..... .|...+..+.|+|++. +|++++ |+.|++||+++++.+.. +..|.+.|+++
T Consensus 366 ~s~s~dg~v~vwd~~~~~---~~~~~-~~~~~~~~~~~~~~~~-~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v~~v 439 (464)
T 3v7d_B 366 VSAAADGSIRGWDANDYS---RKFSY-HHTNLSAITTFYVSDN-ILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSV 439 (464)
T ss_dssp EEEETTSEEEEEETTTCC---EEEEE-ECTTCCCEEEEEECSS-EEEEEE-TTEEEEEETTTCCEEESCTTTTCSEEEEE
T ss_pred EEEeCCCcEEEEECCCCc---eeeee-cCCCCccEEEEEeCCC-EEEEec-CCeEEEEECCCCcEEehhhccCCCcEEEE
Confidence 999999999999997532 23333 3666778889999885 588888 89999999999988875 67899999999
Q ss_pred eecCCCEEEEccCCceEEEe
Q 036314 322 DWWRGDSVISGGVDSKLCVS 341 (347)
Q Consensus 322 ~~~~~~~l~s~s~D~~v~vw 341 (347)
+|+++..+++++.|+.+.+|
T Consensus 440 ~~~~~~l~~~~~~~g~~~i~ 459 (464)
T 3v7d_B 440 NFKGKTLVAAVEKDGQSFLE 459 (464)
T ss_dssp EEETTEEEEEEEETTEEEEE
T ss_pred EecCCEEEEEEEeCCeEEEE
Confidence 99855566777778777665
No 69
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=4.7e-36 Score=309.77 Aligned_cols=281 Identities=22% Similarity=0.281 Sum_probs=237.0
Q ss_pred CCCcCCceeeccCC-CCCEEEEEecCCeEEEEcCC-CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEec
Q 036314 20 PSLHDDWVSAVDGS-NPGFILTGCYDNLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKF 97 (347)
Q Consensus 20 ~~~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~-~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~ 97 (347)
..+|.+.|++++++ ++.+||+|+.||+|++||.. +.++..+.+|.+.|.+++|+|++ ..|++++.|++|++||+
T Consensus 611 ~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~----~~l~s~~~d~~v~vwd~ 686 (1249)
T 3sfz_A 611 VRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDD----SYIATCSADKKVKIWDS 686 (1249)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTS----SEEEEEETTSEEEEEET
T ss_pred EecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCC----CEEEEEeCCCeEEEEEC
Confidence 34899999999998 56799999999999999974 67888999999999999999954 37999999999999999
Q ss_pred cccccccCccccceeeeeeccccceEEEEEeC--CCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccc
Q 036314 98 DAEELVNHPKKIRSFKILRGHKASVHSIAAET--SGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLE 175 (347)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~--~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (347)
.+++ .+..+.+|..+|.+++|++ ++.++++|+.|++|++||+.++
T Consensus 687 ~~~~---------~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~------------------------ 733 (1249)
T 3sfz_A 687 ATGK---------LVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQK------------------------ 733 (1249)
T ss_dssp TTCC---------EEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSS------------------------
T ss_pred CCCc---------eEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCc------------------------
Confidence 8764 4567889999999999999 4568999999999999998753
Q ss_pred ccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeeeeC--------------eeeEEEEeeCCCCc
Q 036314 176 GEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCG--------------KALNCIDIGGEGSA 240 (347)
Q Consensus 176 ~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~ 240 (347)
.+...+.+|...|.++.| |+++.+++++.||+|++||++++.....+... ..+.++++++++ .
T Consensus 734 -~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg-~ 811 (1249)
T 3sfz_A 734 -ECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADG-D 811 (1249)
T ss_dssp -SEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTS-S
T ss_pred -chhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCC-C
Confidence 335567789999999998 57789999999999999999988766554321 145677887655 4
Q ss_pred EEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEE
Q 036314 241 LIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLC 320 (347)
Q Consensus 241 ~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~ 320 (347)
.+++++ ++.+.+||+..... ......+|...|.+++|+|++. ++++++.|+.|++||++++..+..+.+|.+.|.+
T Consensus 812 ~l~~~~-~~~v~~~d~~~~~~--~~~~~~~~~~~v~~~~~sp~~~-~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~ 887 (1249)
T 3sfz_A 812 KIIVAA-KNKVLLFDIHTSGL--LAEIHTGHHSTIQYCDFSPYDH-LAVIALSQYCVELWNIDSRLKVADCRGHLSWVHG 887 (1249)
T ss_dssp EEEEEE-TTEEEEEETTTCCE--EEEEECSSSSCCCEEEECSSTT-EEEEECSSSCEEEEETTTTEEEEEECCCSSCEEE
T ss_pred EEEEEc-CCcEEEEEecCCCc--eeEEcCCCCCceEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCceeeecCCCccceEE
Confidence 556555 78999999875322 2223348999999999999986 5999999999999999999989999999999999
Q ss_pred EeecC-CCEEEEccCCceEEEeec
Q 036314 321 ADWWR-GDSVISGGVDSKLCVSSG 343 (347)
Q Consensus 321 ~~~~~-~~~l~s~s~D~~v~vw~~ 343 (347)
++|+| |++|++++.|++|++|+.
T Consensus 888 v~~spdg~~l~s~s~dg~v~vw~~ 911 (1249)
T 3sfz_A 888 VMFSPDGSSFLTASDDQTIRVWET 911 (1249)
T ss_dssp EEECTTSSEEEEEETTSCEEEEEH
T ss_pred EEECCCCCEEEEEeCCCeEEEEEc
Confidence 99985 678999999999999985
No 70
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=5.8e-36 Score=268.32 Aligned_cols=282 Identities=20% Similarity=0.262 Sum_probs=220.1
Q ss_pred CCCCcCCceeeccCCCC----CEEEEEecCCeEEEEcCC--CeEE-EEeeccCCceEEEEEeecCCCceEEEEEccCCCc
Q 036314 19 EPSLHDDWVSAVDGSNP----GFILTGCYDNLGRVWKAG--GVCT-HILEGHCGAVSSVNIIKSDGLKYVTVATASKDQT 91 (347)
Q Consensus 19 ~~~~h~~~v~~~~~~~~----~~l~sg~~d~~i~iw~~~--~~~~-~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~ 91 (347)
...+|.+.|++++++++ .+|++|+.||+|++||.. +... ..+.+|.+.|.+++|+|++ ..|++++.||+
T Consensus 34 ~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~----~~l~s~~~dg~ 109 (368)
T 3mmy_A 34 VTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDG----SKVFTASCDKT 109 (368)
T ss_dssp CSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTS----SEEEEEETTSE
T ss_pred eccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCC----CEEEEEcCCCc
Confidence 46789999999999853 799999999999999975 4444 7899999999999999844 37999999999
Q ss_pred EEEEeccccccccCccccceeeeeeccccceEEEEE--eCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcc
Q 036314 92 LRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAA--ETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQV 169 (347)
Q Consensus 92 v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~--s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~ 169 (347)
|++||+.+++. ..+.+|..+|.+++| ++++++|++++.|++|++||+.+..
T Consensus 110 v~iwd~~~~~~----------~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~----------------- 162 (368)
T 3mmy_A 110 AKMWDLSSNQA----------IQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSN----------------- 162 (368)
T ss_dssp EEEEETTTTEE----------EEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSS-----------------
T ss_pred EEEEEcCCCCc----------eeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCc-----------------
Confidence 99999987542 235679999999999 8999999999999999999987542
Q ss_pred ccccccccccccccCCccceEEEEeCCCCeEEEEecCCcEEEEECCCCceeeeee---eCeeeEEEEeeCCC---CcEEE
Q 036314 170 EEPQLEGEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIF---CGKALNCIDIGGEG---SALIA 243 (347)
Q Consensus 170 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~---~~~~~~~~~~~~~~---~~~la 243 (347)
.+..+..|. .+.++.+. ...+++++.++.+++||++......... ......++.+.... ...++
T Consensus 163 --------~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (368)
T 3mmy_A 163 --------PMMVLQLPE-RCYCADVI-YPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFA 232 (368)
T ss_dssp --------CSEEEECSS-CEEEEEEE-TTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEE
T ss_pred --------EEEEEecCC-CceEEEec-CCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEE
Confidence 223333343 34444432 3578888999999999998764332221 12234444443222 22388
Q ss_pred EecCCCcEEEEeCCCCCCCCCeEEecCCCC------------CeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceee
Q 036314 244 AGGSDPILRIWDPRKPGTSAPVFQFSSHNS------------WISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVI 311 (347)
Q Consensus 244 ~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~------------~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~ 311 (347)
+++.|+.|++||++..........+.+|.. .|.+++|+|++. +|++++.||.|++||+++++.+..+
T Consensus 233 ~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~s~~~dg~i~iwd~~~~~~~~~~ 311 (368)
T 3mmy_A 233 LGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHG-TLATVGSDGRFSFWDKDARTKLKTS 311 (368)
T ss_dssp EEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTC-CEEEEETTSCEEEEETTTTEEEEEC
T ss_pred EecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCC-EEEEEccCCeEEEEECCCCcEEEEe
Confidence 999999999999975432134567777776 799999999986 5999999999999999999999999
Q ss_pred cCCCCeEEEEeecC-CCEEEEccCCceEEEee
Q 036314 312 DSHKDKVLCADWWR-GDSVISGGVDSKLCVSS 342 (347)
Q Consensus 312 ~~h~~~v~~~~~~~-~~~l~s~s~D~~v~vw~ 342 (347)
.+|.+.|.+++|+| |++||++|.|+..+.|.
T Consensus 312 ~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~ 343 (368)
T 3mmy_A 312 EQLDQPISACCFNHNGNIFAYASSYDWSKGHE 343 (368)
T ss_dssp CCCSSCEEEEEECTTSSCEEEEECCCSTTCGG
T ss_pred cCCCCCceEEEECCCCCeEEEEeccccccccc
Confidence 99999999999985 77899999887655544
No 71
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.1e-35 Score=261.82 Aligned_cols=247 Identities=27% Similarity=0.451 Sum_probs=205.4
Q ss_pred eEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEE
Q 036314 55 VCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMV 134 (347)
Q Consensus 55 ~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l 134 (347)
.....+.+|.+.|.+++|+|++ ..|++++.||+|++|++..++ ....+.+|..+|.+++|+|++++|
T Consensus 14 ~~~~~~~gh~~~v~~~~~s~~~----~~l~s~~~dg~i~iw~~~~~~---------~~~~~~~h~~~v~~~~~~~~~~~l 80 (312)
T 4ery_A 14 ALKFTLAGHTKAVSSVKFSPNG----EWLASSSADKLIKIWGAYDGK---------FEKTISGHKLGISDVAWSSDSNLL 80 (312)
T ss_dssp EEEEEECCCSSCEEEEEECTTS----SEEEEEETTSCEEEEETTTCC---------EEEEECCCSSCEEEEEECTTSSEE
T ss_pred eeEEEEcccCCcEEEEEECCCC----CEEEEeeCCCeEEEEeCCCcc---------cchhhccCCCceEEEEEcCCCCEE
Confidence 4556789999999999999854 379999999999999987653 345678999999999999999999
Q ss_pred EEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEE
Q 036314 135 CSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWD 213 (347)
Q Consensus 135 ~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd 213 (347)
++++.|++|++||+.+. +.+..+.+|...|.++.| |+++.|++++.|++|++||
T Consensus 81 ~s~~~d~~i~vwd~~~~-------------------------~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd 135 (312)
T 4ery_A 81 VSASDDKTLKIWDVSSG-------------------------KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 135 (312)
T ss_dssp EEEETTSEEEEEETTTC-------------------------CEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEE
T ss_pred EEECCCCEEEEEECCCC-------------------------cEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEE
Confidence 99999999999998753 235567789999999998 5778999999999999999
Q ss_pred CCCCceeeeeee-CeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEe-cCCCCCeeEEEeCCCCCeEEEEE
Q 036314 214 VEMGKDLSDIFC-GKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQF-SSHNSWISACKWHNKSWFHLISA 291 (347)
Q Consensus 214 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~-~~h~~~v~~v~~s~~~~~~l~s~ 291 (347)
+++++.+..+.. ..++.+++++++ +.++++++.|+.|++||++... ....+ ..|...+..++|+|++. +|+++
T Consensus 136 ~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~wd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~l~~~ 210 (312)
T 4ery_A 136 VKTGKCLKTLPAHSDPVSAVHFNRD-GSLIVSSSYDGLCRIWDTASGQ---CLKTLIDDDNPPVSFVKFSPNGK-YILAA 210 (312)
T ss_dssp TTTCCEEEEECCCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTTCC---EEEEECCSSCCCEEEEEECTTSS-EEEEE
T ss_pred CCCCEEEEEecCCCCcEEEEEEcCC-CCEEEEEeCCCcEEEEECCCCc---eeeEEeccCCCceEEEEECCCCC-EEEEE
Confidence 999887777654 357889999764 5688999999999999997532 23333 45667899999999986 59999
Q ss_pred eCCCcEEEEEcCCCccceeecCCCCeEEE--Eeec--CCCEEEEccCCceEEEeecc
Q 036314 292 SYDGKVMLWDLRTAWPLSVIDSHKDKVLC--ADWW--RGDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 292 s~D~~i~lwd~~~~~~~~~~~~h~~~v~~--~~~~--~~~~l~s~s~D~~v~vw~~~ 344 (347)
+.|+.|++||+++++.+..+.+|...+.+ ..|+ ++.+|++|+.|++|++|+..
T Consensus 211 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~ 267 (312)
T 4ery_A 211 TLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQ 267 (312)
T ss_dssp ETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETT
T ss_pred cCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECC
Confidence 99999999999999888889888765433 2343 46789999999999999864
No 72
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1.4e-35 Score=263.37 Aligned_cols=261 Identities=20% Similarity=0.242 Sum_probs=209.0
Q ss_pred EEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeC--CCCEEE
Q 036314 58 HILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAET--SGNMVC 135 (347)
Q Consensus 58 ~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~--~~~~l~ 135 (347)
..+.+|.+.|.+++|+|++ ..|++++.||+|++||+..++. ..+....+.+|..+|.+++|+| ++++|+
T Consensus 5 ~~~~gH~~~v~~~~~~~~~----~~l~~~~~dg~i~iw~~~~~~~-----~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~ 75 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYG----RHVATCSSDQHIKVFKLDKDTS-----NWELSDSWRAHDSSIVAIDWASPEYGRIIA 75 (351)
T ss_dssp CEECCCSSCEEEEEECSSS----SEEEEEETTSEEEEEEECSSSC-----CEEEEEEEECCSSCEEEEEECCGGGCSEEE
T ss_pred ccCcccccceeEEEEcCCC----CEEEEeeCCCeEEEEECCCCCC-----cceecceeccCCCcEEEEEEcCCCCCCEEE
Confidence 4578999999999999954 3799999999999999976431 2235567789999999999999 699999
Q ss_pred EeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeC-C--CCeEEEEecCCcEEEE
Q 036314 136 SGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP-Q--QETIYSASWDHSVRTW 212 (347)
Q Consensus 136 sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~--~~~l~s~s~dg~v~vw 212 (347)
+++.|++|++||+......... .....+..+.+|...|.++.|. + +..|++++.|+.|++|
T Consensus 76 s~~~dg~v~vwd~~~~~~~~~~----------------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iw 139 (351)
T 3f3f_A 76 SASYDKTVKLWEEDPDQEECSG----------------RRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLY 139 (351)
T ss_dssp EEETTSCEEEEEECTTSCTTSS----------------CSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEE
T ss_pred EEcCCCeEEEEecCCCcccccc----------------cCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEe
Confidence 9999999999998764321100 0012345677899999999984 5 7789999999999999
Q ss_pred ECCCCceeeeee--------------eCeeeEEEEeeCC--CCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCee
Q 036314 213 DVEMGKDLSDIF--------------CGKALNCIDIGGE--GSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWIS 276 (347)
Q Consensus 213 d~~~~~~~~~~~--------------~~~~~~~~~~~~~--~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~ 276 (347)
|+++++.+..+. ....+.+++++|. ++..+++++.|+.+.+|+.... .......+.+|...|.
T Consensus 140 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~h~~~i~ 218 (351)
T 3f3f_A 140 DALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDG-KLHVAAKLPGHKSLIR 218 (351)
T ss_dssp ECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTS-CEEEEEECCCCCSCEE
T ss_pred cCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCC-ceeeeeecCCCCccee
Confidence 998877554432 1235778888775 4668899999999988876542 2334677889999999
Q ss_pred EEEeCCCCC---eEEEEEeCCCcEEEEEcCCC----------------------------------------------cc
Q 036314 277 ACKWHNKSW---FHLISASYDGKVMLWDLRTA----------------------------------------------WP 307 (347)
Q Consensus 277 ~v~~s~~~~---~~l~s~s~D~~i~lwd~~~~----------------------------------------------~~ 307 (347)
+++|+|++. .+|++++.|+.|++||++.+ +.
T Consensus 219 ~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (351)
T 3f3f_A 219 SISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVEL 298 (351)
T ss_dssp EEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEE
T ss_pred EEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccE
Confidence 999999973 57999999999999999875 45
Q ss_pred ceeecCCCCeEEEEeecC-CCEEEEccCCceEEEeecc
Q 036314 308 LSVIDSHKDKVLCADWWR-GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 308 ~~~~~~h~~~v~~~~~~~-~~~l~s~s~D~~v~vw~~~ 344 (347)
+..+.+|.+.|.+++|+| +++|++++.|++|+||+..
T Consensus 299 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~ 336 (351)
T 3f3f_A 299 LSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKAT 336 (351)
T ss_dssp EEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred EEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecC
Confidence 666789999999999985 6789999999999999865
No 73
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=7.9e-35 Score=258.65 Aligned_cols=252 Identities=22% Similarity=0.359 Sum_probs=202.1
Q ss_pred EEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEE
Q 036314 56 CTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVC 135 (347)
Q Consensus 56 ~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~ 135 (347)
+..+|.||.+.|++|+|+|+.+ .+|+|||.|++|++||+...+. ....+...+.+|..+|.+++|+|++++|+
T Consensus 30 l~~tL~GH~~~V~~v~~sp~~~---~~l~S~s~D~~i~vWd~~~~~~----~~~~~~~~l~~h~~~V~~~~~s~dg~~l~ 102 (340)
T 4aow_A 30 LRGTLKGHNGWVTQIATTPQFP---DMILSASRDKTIIMWKLTRDET----NYGIPQRALRGHSHFVSDVVISSDGQFAL 102 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTCT---TEEEEEETTSCEEEEEECCSSS----CSEEEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred EEEEECCccCCEEEEEEeCCCC---CEEEEEcCCCeEEEEECCCCCc----ccceeeEEEeCCCCCEEEEEECCCCCEEE
Confidence 4567999999999999998644 3799999999999999976532 12235567889999999999999999999
Q ss_pred EeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEEC
Q 036314 136 SGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDV 214 (347)
Q Consensus 136 sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~ 214 (347)
+++.|+.|++|+..... .......+...+....+ +.+..|++++.|+.+++||+
T Consensus 103 s~~~d~~i~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~ 157 (340)
T 4aow_A 103 SGSWDGTLRLWDLTTGT-------------------------TTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNT 157 (340)
T ss_dssp EEETTSEEEEEETTTTE-------------------------EEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECT
T ss_pred EEcccccceEEeecccc-------------------------eeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEe
Confidence 99999999999976531 12223344455566665 56788999999999999998
Q ss_pred CCCceeeeee--eCeeeEEEEeeCCC-CcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEE
Q 036314 215 EMGKDLSDIF--CGKALNCIDIGGEG-SALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291 (347)
Q Consensus 215 ~~~~~~~~~~--~~~~~~~~~~~~~~-~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~ 291 (347)
.......... ....+.++.+.++. ..++++++.|+.|++||++.. .....+.+|.+.|.+++|+|++. +|++|
T Consensus 158 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~---~~~~~~~~h~~~v~~~~~s~~~~-~l~s~ 233 (340)
T 4aow_A 158 LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANC---KLKTNHIGHTGYLNTVTVSPDGS-LCASG 233 (340)
T ss_dssp TSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTT---EEEEEECCCSSCEEEEEECTTSS-EEEEE
T ss_pred CCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCC---ceeeEecCCCCcEEEEEECCCCC-EEEEE
Confidence 7654433222 23467778876543 346788999999999999753 34678889999999999999986 69999
Q ss_pred eCCCcEEEEEcCCCccceeecCCCCeEEEEeecCCCEEEEccCCceEEEeecc
Q 036314 292 SYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 292 s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~D~~v~vw~~~ 344 (347)
+.|++|++||+++.+++..+..| ..|.++.|+|+.++++++.|++|+||+..
T Consensus 234 s~Dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~d~~i~iwd~~ 285 (340)
T 4aow_A 234 GKDGQAMLWDLNEGKHLYTLDGG-DIINALCFSPNRYWLCAATGPSIKIWDLE 285 (340)
T ss_dssp ETTCEEEEEETTTTEEEEEEECS-SCEEEEEECSSSSEEEEEETTEEEEEETT
T ss_pred eCCCeEEEEEeccCceeeeecCC-ceEEeeecCCCCceeeccCCCEEEEEECC
Confidence 99999999999998888887754 68999999988888888999999999854
No 74
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.7e-35 Score=293.72 Aligned_cols=305 Identities=13% Similarity=0.094 Sum_probs=218.7
Q ss_pred cCCceeeccCC-CCCEEEEEecCCeEEEEcCCC-eEE-----------EEeeccCCceEEEEEeecCCCceEEEEEccCC
Q 036314 23 HDDWVSAVDGS-NPGFILTGCYDNLGRVWKAGG-VCT-----------HILEGHCGAVSSVNIIKSDGLKYVTVATASKD 89 (347)
Q Consensus 23 h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~~-~~~-----------~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~D 89 (347)
|...|++++|+ ++.+|++|+.||+|++||..+ .+. ..+.+|.+.|.+++|+|.+ ...|++|+.|
T Consensus 97 ~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~---~~~l~~g~~d 173 (902)
T 2oaj_A 97 VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRD---IGTVLISYEY 173 (902)
T ss_dssp CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTE---EEEEEEECSS
T ss_pred CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCC---CCEEEEEeCC
Confidence 67789999998 567999999999999999864 332 2346799999999999843 3478999999
Q ss_pred CcEEEEeccccccccCccccceeeeee------------------ccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCC
Q 036314 90 QTLRLWKFDAEELVNHPKKIRSFKILR------------------GHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDS 151 (347)
Q Consensus 90 g~v~~wd~~~~~~~~~~~~~~~~~~~~------------------~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~ 151 (347)
|+| +||+..++.. ..+. +|...|.+++|+|+|++|++|+.|++|++||+.++
T Consensus 174 g~v-lWd~~~~~~~---------~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g 243 (902)
T 2oaj_A 174 VTL-TYSLVENEIK---------QSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSG 243 (902)
T ss_dssp CEE-EEETTTTEEE---------EEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTC
T ss_pred CcE-EEECCCCceE---------EEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCC
Confidence 999 9999876432 2233 35688999999999999999999999999998754
Q ss_pred CCCC-----------------------c-cc---eee--------e----c-cC------CC-ccc--------------
Q 036314 152 DAAG-----------------------N-QV---SIK--------K----R-KG------NN-QVE-------------- 170 (347)
Q Consensus 152 ~~~~-----------------------~-~~---~~~--------~----~-~~------~~-~~~-------------- 170 (347)
.... . .+ ... . . .. .. ...
T Consensus 244 ~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~ 323 (902)
T 2oaj_A 244 HMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEG 323 (902)
T ss_dssp CEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHH
T ss_pred cEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhh
Confidence 3210 0 00 000 0 0 00 00 000
Q ss_pred -------------------------------ccc----c--------------------ccccc-------ccccCCccc
Q 036314 171 -------------------------------EPQ----L--------------------EGEAI-------STLVGHTQC 188 (347)
Q Consensus 171 -------------------------------~~~----~--------------------~~~~~-------~~~~~h~~~ 188 (347)
.+. . .+... ..+..|...
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~ 403 (902)
T 2oaj_A 324 MKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPL 403 (902)
T ss_dssp HHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTB
T ss_pred hhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCC
Confidence 000 0 00000 011222233
Q ss_pred eEEEE----------------------------------e-CCCCeEEEEecCCcEEEEECCCCcee--eee--------
Q 036314 189 VSSVV----------------------------------W-PQQETIYSASWDHSVRTWDVEMGKDL--SDI-------- 223 (347)
Q Consensus 189 v~~~~----------------------------------~-~~~~~l~s~s~dg~v~vwd~~~~~~~--~~~-------- 223 (347)
|.+++ | |+++.|++++.|++|++||+.++... ..+
T Consensus 404 v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~ 483 (902)
T 2oaj_A 404 ATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTL 483 (902)
T ss_dssp EEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHT
T ss_pred eeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhc
Confidence 44333 2 45678999999999999999887421 111
Q ss_pred --eeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCC----------------------------------------
Q 036314 224 --FCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGT---------------------------------------- 261 (347)
Q Consensus 224 --~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~---------------------------------------- 261 (347)
.+...+.+++|+|+ +.+||+|+.|++|+|||+.....
T Consensus 484 ~~~h~~~V~svafspd-g~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (902)
T 2oaj_A 484 NKAKELAVDKISFAAE-TLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVR 562 (902)
T ss_dssp TCSSSCCEEEEEEETT-TTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCS
T ss_pred CCCCCCceeEEEecCC-CCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCC
Confidence 12346899999875 45889999999999999864310
Q ss_pred --CCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccce-----eec-CCCCeEEEEeec-----CC--
Q 036314 262 --SAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLS-----VID-SHKDKVLCADWW-----RG-- 326 (347)
Q Consensus 262 --~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~-----~~~-~h~~~v~~~~~~-----~~-- 326 (347)
..++..+.+|.+.|.+++|+|+| +||+|+.|++|+|||++++..+. .+. +|.+.|++++|+ ++
T Consensus 563 ~g~~~~~~l~~h~~~V~svafSpdG--~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~ 640 (902)
T 2oaj_A 563 QGFMPSTAVHANKGKTSAINNSNIG--FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGY 640 (902)
T ss_dssp EEEEEEEEECCCSCSEEEEEECBTS--EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSS
T ss_pred CccceeEEEEcCCCcEEEEEecCCc--EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCC
Confidence 01256788999999999999998 69999999999999998765432 344 899999999999 64
Q ss_pred --CEEEEccCCceEEEeec
Q 036314 327 --DSVISGGVDSKLCVSSG 343 (347)
Q Consensus 327 --~~l~s~s~D~~v~vw~~ 343 (347)
.+|++|+.|++|++|+.
T Consensus 641 ~~~~l~sgs~D~tv~~wd~ 659 (902)
T 2oaj_A 641 SSILMVCGTDMGEVITYKI 659 (902)
T ss_dssp EEEEEEEEETTSEEEEEEE
T ss_pred cceEEEEEecCCcEEEEEE
Confidence 57999999999999985
No 75
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.7e-35 Score=265.26 Aligned_cols=256 Identities=20% Similarity=0.332 Sum_probs=204.6
Q ss_pred eEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCC--CC
Q 036314 55 VCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETS--GN 132 (347)
Q Consensus 55 ~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~--~~ 132 (347)
.++..+.+|.+.|.+++|+|++ ..|++++.||+|++|++...+ .+....+.+|..+|.+++|+++ ++
T Consensus 2 ~~~~~~~~h~~~v~~~~~s~~~----~~l~~~~~dg~i~iw~~~~~~-------~~~~~~~~~h~~~v~~~~~~~~~~~~ 70 (379)
T 3jrp_A 2 SMVVIANAHNELIHDAVLDYYG----KRLATCSSDKTIKIFEVEGET-------HKLIDTLTGHEGPVWRVDWAHPKFGT 70 (379)
T ss_dssp ---CCEEECCCCEEEEEECSSS----SEEEEEETTSCEEEEEEETTE-------EEEEEEECCCSSCEEEEEECCGGGCS
T ss_pred CccEEecCCcccEEEEEEcCCC----CEEEEEECCCcEEEEecCCCc-------ceeeeEecCCCCcEEEEEeCCCCCCC
Confidence 4567889999999999999854 379999999999999987332 2355678899999999999877 89
Q ss_pred EEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeC-C--CCeEEEEecCCcE
Q 036314 133 MVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP-Q--QETIYSASWDHSV 209 (347)
Q Consensus 133 ~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~--~~~l~s~s~dg~v 209 (347)
+|++++.|++|++||+.+.. ...+..+.+|...|.++.|. + +..|++++.|+.|
T Consensus 71 ~l~s~~~dg~v~iwd~~~~~-----------------------~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i 127 (379)
T 3jrp_A 71 ILASCSYDGKVLIWKEENGR-----------------------WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKV 127 (379)
T ss_dssp EEEEEETTSCEEEEEEETTE-----------------------EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEE
T ss_pred EEEEeccCCEEEEEEcCCCc-----------------------eeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcE
Confidence 99999999999999987531 01345667788999999984 5 6789999999999
Q ss_pred EEEECCCCceeeee--e-eCeeeEEEEeeCC------------CCcEEEEecCCCcEEEEeCCCCCCC-CCeEEecCCCC
Q 036314 210 RTWDVEMGKDLSDI--F-CGKALNCIDIGGE------------GSALIAAGGSDPILRIWDPRKPGTS-APVFQFSSHNS 273 (347)
Q Consensus 210 ~vwd~~~~~~~~~~--~-~~~~~~~~~~~~~------------~~~~la~~~~d~~i~iwd~~~~~~~-~~~~~~~~h~~ 273 (347)
++||++.+...... . +...+.++++.+. ++.++++++.|+.|++||++..... .....+.+|..
T Consensus 128 ~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~ 207 (379)
T 3jrp_A 128 SVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSD 207 (379)
T ss_dssp EEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSS
T ss_pred EEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccC
Confidence 99999887433322 2 3457889999874 5678999999999999998753321 23457789999
Q ss_pred CeeEEEeCCCC--CeEEEEEeCCCcEEEEEcCCCcc-----ceeecCCCCeEEEEeecC-CCEEEEccCCceEEEeecc
Q 036314 274 WISACKWHNKS--WFHLISASYDGKVMLWDLRTAWP-----LSVIDSHKDKVLCADWWR-GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 274 ~v~~v~~s~~~--~~~l~s~s~D~~i~lwd~~~~~~-----~~~~~~h~~~v~~~~~~~-~~~l~s~s~D~~v~vw~~~ 344 (347)
.|.+++|+|++ ..+|++++.|+.|++||++++.. +.....|...|++++|+| +++|++++.||.|+||+..
T Consensus 208 ~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~ 286 (379)
T 3jrp_A 208 WVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 286 (379)
T ss_dssp CEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEE
T ss_pred cEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCC
Confidence 99999999994 46799999999999999998642 222345889999999985 7789999999999999854
No 76
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.9e-34 Score=276.26 Aligned_cols=287 Identities=14% Similarity=0.169 Sum_probs=237.3
Q ss_pred CCCcCCceeeccCCC-CCEEEEEecCCeEEEEcCC-C----eEEEEeeccCCc-eEEEEEee--cCCCceEEEEEccCCC
Q 036314 20 PSLHDDWVSAVDGSN-PGFILTGCYDNLGRVWKAG-G----VCTHILEGHCGA-VSSVNIIK--SDGLKYVTVATASKDQ 90 (347)
Q Consensus 20 ~~~h~~~v~~~~~~~-~~~l~sg~~d~~i~iw~~~-~----~~~~~l~~h~~~-V~~v~~~~--~~~~~~~~l~s~s~Dg 90 (347)
+..|.+.|+++++++ +++||+++ |+.|++|+.. + .....+.+|.+. |.+++|+| ++. .|++++.||
T Consensus 14 ~~~~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~----~l~s~~~dg 88 (615)
T 1pgu_A 14 PSTQRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQ----YLCSGDESG 88 (615)
T ss_dssp CCCCTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCC----EEEEEETTS
T ss_pred CCCccCceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCC----EEEEecCCC
Confidence 457899999999984 56899888 8999999975 5 578889999999 99999998 654 699999999
Q ss_pred cEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCC----CcEEEEecCCCCCCCccceeeeccCC
Q 036314 91 TLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWD----CTISLWRTNDSDAAGNQVSIKKRKGN 166 (347)
Q Consensus 91 ~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~D----g~I~iwd~~~~~~~~~~~~~~~~~~~ 166 (347)
+|++||+.+++... ....+....+.+|..+|.+++|+|+++++++++.| +.|++||..
T Consensus 89 ~v~vw~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~----------------- 150 (615)
T 1pgu_A 89 KVIVWGWTFDKESN-SVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSG----------------- 150 (615)
T ss_dssp EEEEEEEEEEGGGT-EEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTC-----------------
T ss_pred EEEEEeCCCCcccc-cccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEECC-----------------
Confidence 99999996441000 00123456778899999999999999999999988 799999832
Q ss_pred CccccccccccccccccCCccceEEEEeC-CCC-eEEEEecCCcEEEEECCCCceeeeeee-Ce---eeEEEEeeCCCCc
Q 036314 167 NQVEEPQLEGEAISTLVGHTQCVSSVVWP-QQE-TIYSASWDHSVRTWDVEMGKDLSDIFC-GK---ALNCIDIGGEGSA 240 (347)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~-~l~s~s~dg~v~vwd~~~~~~~~~~~~-~~---~~~~~~~~~~~~~ 240 (347)
..+..+.+|...|.++.|. +++ .+++++.|+.|++||+++++.+..+.. .. .+.+++++++++.
T Consensus 151 ----------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 220 (615)
T 1pgu_A 151 ----------NSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGE 220 (615)
T ss_dssp ----------CEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCC
T ss_pred ----------CcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCC
Confidence 2345677899999999985 555 799999999999999998887777663 34 6899999876367
Q ss_pred EEEEecCCCcEEEEeCCCCCCCCCeEEe-c---CCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCC--
Q 036314 241 LIAAGGSDPILRIWDPRKPGTSAPVFQF-S---SHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSH-- 314 (347)
Q Consensus 241 ~la~~~~d~~i~iwd~~~~~~~~~~~~~-~---~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h-- 314 (347)
++++++.|+.|++||++.. ..+..+ . +|...|.++.|+ ++. +|++++.|+.|++||+++++.+..+..|
T Consensus 221 ~l~~~~~dg~i~vwd~~~~---~~~~~~~~~~~~~~~~v~~~~~~-~~~-~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~ 295 (615)
T 1pgu_A 221 FVITVGSDRKISCFDGKSG---EFLKYIEDDQEPVQGGIFALSWL-DSQ-KFATVGADATIRVWDVTTSKCVQKWTLDKQ 295 (615)
T ss_dssp EEEEEETTCCEEEEETTTC---CEEEECCBTTBCCCSCEEEEEES-SSS-EEEEEETTSEEEEEETTTTEEEEEEECCTT
T ss_pred EEEEEeCCCeEEEEECCCC---CEeEEecccccccCCceEEEEEc-CCC-EEEEEcCCCcEEEEECCCCcEEEEEcCCCC
Confidence 8899999999999998753 345666 5 899999999999 764 6999999999999999999888888766
Q ss_pred --CCeEEEEeecCCCEEEEccCCceEEEeecc
Q 036314 315 --KDKVLCADWWRGDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 315 --~~~v~~~~~~~~~~l~s~s~D~~v~vw~~~ 344 (347)
...+.++.|++++++++++.|+.|++|+..
T Consensus 296 ~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~ 327 (615)
T 1pgu_A 296 QLGNQQVGVVATGNGRIISLSLDGTLNFYELG 327 (615)
T ss_dssp CGGGCEEEEEEEETTEEEEEETTSCEEEEETT
T ss_pred cccCceeEEEeCCCCeEEEEECCCCEEEEECC
Confidence 367888899888899999999999999864
No 77
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1.3e-34 Score=256.98 Aligned_cols=278 Identities=19% Similarity=0.188 Sum_probs=211.8
Q ss_pred CCCCCcCCceeeccCC-CCCEEEEEecCCeEEEEcCCC-----eEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCc
Q 036314 18 EEPSLHDDWVSAVDGS-NPGFILTGCYDNLGRVWKAGG-----VCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQT 91 (347)
Q Consensus 18 ~~~~~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~~-----~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~ 91 (347)
....+|++.|++++++ ++.+||+|+.||+|++||... .....+.+|...|.+++|+|.. ++..|++++.||+
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--d~~~l~s~~~dg~ 82 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPE--YGRIIASASYDKT 82 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGG--GCSEEEEEETTSC
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCC--CCCEEEEEcCCCe
Confidence 3457899999999998 567999999999999999752 3667789999999999999841 1237999999999
Q ss_pred EEEEeccccccccCccccceeeeeeccccceEEEEEeCC--CCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcc
Q 036314 92 LRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETS--GNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQV 169 (347)
Q Consensus 92 v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~--~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~ 169 (347)
|++||+..++........+....+.+|..+|.+++|+|+ ++++++++.|++|++||+.+.............
T Consensus 83 v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~------ 156 (351)
T 3f3f_A 83 VKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEM------ 156 (351)
T ss_dssp EEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEE------
T ss_pred EEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccc------
Confidence 999999876432222333556778899999999999999 999999999999999998865432211100000
Q ss_pred ccccccccccccccCCccceEEEEeC-C---CCeEEEEecCCcEEEEECCCCce--eeeee-eCeeeEEEEeeCCCC---
Q 036314 170 EEPQLEGEAISTLVGHTQCVSSVVWP-Q---QETIYSASWDHSVRTWDVEMGKD--LSDIF-CGKALNCIDIGGEGS--- 239 (347)
Q Consensus 170 ~~~~~~~~~~~~~~~h~~~v~~~~~~-~---~~~l~s~s~dg~v~vwd~~~~~~--~~~~~-~~~~~~~~~~~~~~~--- 239 (347)
........+|...+.++.|. + +..+++++.|+.+.+|+...+.. +..+. +...+.++++++++.
T Consensus 157 ------~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~ 230 (351)
T 3f3f_A 157 ------KVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWY 230 (351)
T ss_dssp ------ESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSS
T ss_pred ------cccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcc
Confidence 00011223577788999984 3 77899999999998888777654 33333 234789999987653
Q ss_pred cEEEEecCCCcEEEEeCCCCCC-------------------------------------------CCCeEEecCCCCCee
Q 036314 240 ALIAAGGSDPILRIWDPRKPGT-------------------------------------------SAPVFQFSSHNSWIS 276 (347)
Q Consensus 240 ~~la~~~~d~~i~iwd~~~~~~-------------------------------------------~~~~~~~~~h~~~v~ 276 (347)
.+|++++.|+.|++||++.... ...+..+.+|...|.
T Consensus 231 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 310 (351)
T 3f3f_A 231 QLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVW 310 (351)
T ss_dssp EEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEE
T ss_pred eEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEE
Confidence 6899999999999999864210 124556788999999
Q ss_pred EEEeCCCCCeEEEEEeCCCcEEEEEcCCCcccee
Q 036314 277 ACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSV 310 (347)
Q Consensus 277 ~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~ 310 (347)
+++|+|++. +|++++.||.|++||+++++....
T Consensus 311 ~~~~s~~~~-~l~s~~~dg~v~iw~~~~~~~~~~ 343 (351)
T 3f3f_A 311 SVSWNLTGT-ILSSAGDDGKVRLWKATYSNEFKC 343 (351)
T ss_dssp EEEECSSSC-CEEEEETTSCEEEEEECTTSCEEE
T ss_pred EEEEcCCCC-EEEEecCCCcEEEEecCcCcchhh
Confidence 999999986 599999999999999998765443
No 78
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.3e-34 Score=282.36 Aligned_cols=252 Identities=19% Similarity=0.322 Sum_probs=205.0
Q ss_pred EEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEE
Q 036314 56 CTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVC 135 (347)
Q Consensus 56 ~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~ 135 (347)
....+.+|.+.|.+++|++++. ..|+|||.|++|++|++..... ........+.+|...|.+++|+|++++|+
T Consensus 374 ~~~~l~~H~~~V~~v~~~~~~~---~~l~s~s~D~~i~~W~~~~~~~----~~~~~~~~~~~h~~~v~~v~~s~~g~~l~ 446 (694)
T 3dm0_A 374 LKGTMRAHTDMVTAIATPIDNA---DIIVSASRDKSIILWKLTKDDK----AYGVAQRRLTGHSHFVEDVVLSSDGQFAL 446 (694)
T ss_dssp EEEEEECCSSCEEEEECCTTCC---SEEEEEETTSEEEEEECCCSTT----CSCEEEEEEECCSSCEEEEEECTTSSEEE
T ss_pred hhhhcccCCceeEEEEecCCCC---CEEEEEeCCCcEEEEEccCCCc----ccccccceecCCCCcEEEEEECCCCCEEE
Confidence 3456899999999999987543 3799999999999999875421 11124457889999999999999999999
Q ss_pred EeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEEC
Q 036314 136 SGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDV 214 (347)
Q Consensus 136 sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~ 214 (347)
||+.|++|+|||+.+. .....+.+|...|.+++| +++..|++++.|++|++||+
T Consensus 447 sgs~Dg~v~vwd~~~~-------------------------~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~ 501 (694)
T 3dm0_A 447 SGSWDGELRLWDLAAG-------------------------VSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNT 501 (694)
T ss_dssp EEETTSEEEEEETTTT-------------------------EEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECT
T ss_pred EEeCCCcEEEEECCCC-------------------------cceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEC
Confidence 9999999999998753 335567889999999998 57788999999999999998
Q ss_pred CCCceeeeee----eCeeeEEEEeeCCC-CcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEE
Q 036314 215 EMGKDLSDIF----CGKALNCIDIGGEG-SALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLI 289 (347)
Q Consensus 215 ~~~~~~~~~~----~~~~~~~~~~~~~~-~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~ 289 (347)
.......... +...+.++.+++++ ...+++++.|++|++||++.. .....+.+|...|.+++|+|++. +|+
T Consensus 502 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~---~~~~~~~~h~~~v~~v~~spdg~-~l~ 577 (694)
T 3dm0_A 502 LGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNC---KLRSTLAGHTGYVSTVAVSPDGS-LCA 577 (694)
T ss_dssp TSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTC---CEEEEECCCSSCEEEEEECTTSS-EEE
T ss_pred CCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCC---cEEEEEcCCCCCEEEEEEeCCCC-EEE
Confidence 6543222111 23358899998765 357899999999999999753 34678899999999999999986 699
Q ss_pred EEeCCCcEEEEEcCCCccceeecCCCCeEEEEeecCCCEEEEccCCceEEEeecc
Q 036314 290 SASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 290 s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~D~~v~vw~~~ 344 (347)
+|+.|++|++||+++++.+..+.. ...|.+++|+|+.++++++.|+.|+||+..
T Consensus 578 sg~~Dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~sp~~~~l~~~~~~~i~iwd~~ 631 (694)
T 3dm0_A 578 SGGKDGVVLLWDLAEGKKLYSLEA-NSVIHALCFSPNRYWLCAATEHGIKIWDLE 631 (694)
T ss_dssp EEETTSBCEEEETTTTEEEECCBC-SSCEEEEEECSSSSEEEEEETTEEEEEETT
T ss_pred EEeCCCeEEEEECCCCceEEEecC-CCcEEEEEEcCCCcEEEEEcCCCEEEEECC
Confidence 999999999999999988877765 468999999986665566678889999864
No 79
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=2.9e-34 Score=263.54 Aligned_cols=261 Identities=19% Similarity=0.274 Sum_probs=207.1
Q ss_pred CCCcCCceeeccCC-CCCEEEEEecCCeEEEEcCC-CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEec
Q 036314 20 PSLHDDWVSAVDGS-NPGFILTGCYDNLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKF 97 (347)
Q Consensus 20 ~~~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~-~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~ 97 (347)
..+|.+.|++++|+ ++.+||+|+.|++|++||.. +.+++.+.+|...|.++.+.+ ..|++|+.|+++++||.
T Consensus 143 ~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~------~~l~sgs~d~~i~~~d~ 216 (420)
T 4gga_A 143 MEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNS------YILSSGSRSGHIHHHDV 216 (420)
T ss_dssp CCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEET------TEEEEEETTSEEEEEET
T ss_pred ecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCC------CEEEEEeCCCceeEeee
Confidence 34788999999998 56799999999999999974 788899999999999988754 36999999999999998
Q ss_pred cccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccccc
Q 036314 98 DAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGE 177 (347)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (347)
.... .....+.+|...+..+.++++++++++++.|+.+++|+....... ..
T Consensus 217 ~~~~--------~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~---------------------~~ 267 (420)
T 4gga_A 217 RVAE--------HHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGG---------------------WV 267 (420)
T ss_dssp TSSS--------CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSC---------------------SC
T ss_pred cccc--------eeeEEecccccceeeeeecCCCCeeeeeeccccceEEeecccccc---------------------ce
Confidence 6532 345678899999999999999999999999999999998764321 11
Q ss_pred ccccccCCccceEEEEeC-CC-CeEEE--EecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEE-ecCCCcEE
Q 036314 178 AISTLVGHTQCVSSVVWP-QQ-ETIYS--ASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAA-GGSDPILR 252 (347)
Q Consensus 178 ~~~~~~~h~~~v~~~~~~-~~-~~l~s--~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~-~~~d~~i~ 252 (347)
.+.....|...|.+++|. .+ ..+++ ++.|++|++||++++.....+..+..+.++.+.+++..++++ |..|+.|+
T Consensus 268 ~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~ 347 (420)
T 4gga_A 268 PLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLV 347 (420)
T ss_dssp CSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEE
T ss_pred eeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCEEE
Confidence 234556788899999984 33 44544 468999999999999988888777788888888777666544 34799999
Q ss_pred EEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEE
Q 036314 253 IWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVL 319 (347)
Q Consensus 253 iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~ 319 (347)
+||++. ..++..+.+|.+.|.+++|+|++. +||||+.|++|+|||+....+....+.|...+.
T Consensus 348 iwd~~~---~~~v~~l~gH~~~V~~l~~spdg~-~l~S~s~D~tvriWdv~~~~~~~~~~~~~~~~~ 410 (420)
T 4gga_A 348 IWKYPT---MAKVAELKGHTSRVLSLTMSPDGA-TVASAAADETLRLWRCFELDPARRREREKASAA 410 (420)
T ss_dssp EEETTT---CCEEEEECCCSSCEEEEEECTTSS-CEEEEETTTEEEEECCSCSSCC-----------
T ss_pred EEECCC---CcEEEEEcCCCCCEEEEEEcCCCC-EEEEEecCCeEEEEECCCCCccchhhhccCCcc
Confidence 999875 345788999999999999999986 599999999999999988776666665554443
No 80
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=3.4e-35 Score=268.05 Aligned_cols=281 Identities=16% Similarity=0.170 Sum_probs=216.2
Q ss_pred ccCCCCC--EEEEEecCCeEEEEcCCC-----eEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEecccccc
Q 036314 30 VDGSNPG--FILTGCYDNLGRVWKAGG-----VCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEEL 102 (347)
Q Consensus 30 ~~~~~~~--~l~sg~~d~~i~iw~~~~-----~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~ 102 (347)
+++++.. ++++++.||.|++|+... .....+.+|.+.|.+++|+|.++ ..|++|+.||+|++||+..++.
T Consensus 40 ~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~---~~l~s~s~dg~v~vw~~~~~~~ 116 (402)
T 2aq5_A 40 CAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHND---NVIASGSEDCTVMVWEIPDGGL 116 (402)
T ss_dssp EEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCT---TEEEEEETTSEEEEEECCTTCC
T ss_pred EEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCC---CEEEEEeCCCeEEEEEccCCCC
Confidence 4444332 455789999999999743 13446889999999999998332 2799999999999999987643
Q ss_pred ccCccccceeeeeeccccceEEEEEeCCC-CEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccccccccc
Q 036314 103 VNHPKKIRSFKILRGHKASVHSIAAETSG-NMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAIST 181 (347)
Q Consensus 103 ~~~~~~~~~~~~~~~h~~~V~~v~~s~~~-~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (347)
... ..++...+.+|...|.+++|+|++ ++|++++.|++|++||+.+. +.+..
T Consensus 117 ~~~--~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~-------------------------~~~~~ 169 (402)
T 2aq5_A 117 VLP--LREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTG-------------------------AAVLT 169 (402)
T ss_dssp SSC--BCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTT-------------------------EEEEE
T ss_pred ccc--cCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCC-------------------------CccEE
Confidence 211 113456788999999999999998 69999999999999998753 23445
Q ss_pred c--cCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeee-eeCe--eeEEEEeeCCCCcEEEEe---cCCCcEE
Q 036314 182 L--VGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDI-FCGK--ALNCIDIGGEGSALIAAG---GSDPILR 252 (347)
Q Consensus 182 ~--~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~la~~---~~d~~i~ 252 (347)
+ .+|...|.+++| +++..|++++.|+.|++||+++++.+..+ ..+. .+.++.+.++ +.++++| +.|+.|+
T Consensus 170 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~g~~~~~d~~i~ 248 (402)
T 2aq5_A 170 LGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSE-GKILTTGFSRMSERQVA 248 (402)
T ss_dssp ECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECST-TEEEEEEECTTCCEEEE
T ss_pred EecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCC-CcEEEEeccCCCCceEE
Confidence 5 679999999999 57788999999999999999998887776 3322 3678888764 5688888 7899999
Q ss_pred EEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCcc-ceeecC--CCCeEEEEeecCCC-E
Q 036314 253 IWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWP-LSVIDS--HKDKVLCADWWRGD-S 328 (347)
Q Consensus 253 iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~-~~~~~~--h~~~v~~~~~~~~~-~ 328 (347)
+||++....+.... ...|...+.++.|+|++..++++++.|+.|++||++++++ +..+.. |.+.|.+++|+|.. .
T Consensus 249 iwd~~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~ 327 (402)
T 2aq5_A 249 LWDTKHLEEPLSLQ-ELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGL 327 (402)
T ss_dssp EEETTBCSSCSEEE-ECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGS
T ss_pred EEcCccccCCceEE-eccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEeccccc
Confidence 99998643322222 2357778999999999987556777899999999998875 555544 45899999998754 4
Q ss_pred EEEccCCceEEEeecc
Q 036314 329 VISGGVDSKLCVSSGV 344 (347)
Q Consensus 329 l~s~s~D~~v~vw~~~ 344 (347)
++ +.|+.+++|+..
T Consensus 328 ~~--s~~~~~~~~~l~ 341 (402)
T 2aq5_A 328 EV--NKCEIARFYKLH 341 (402)
T ss_dssp CG--GGTEEEEEEEEE
T ss_pred ce--ecceeEEEEEcC
Confidence 44 457799999864
No 81
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=4.2e-34 Score=253.30 Aligned_cols=282 Identities=16% Similarity=0.166 Sum_probs=225.4
Q ss_pred CcCCceeeccCC-CCCEEEEEecCCeEEEEcCCC-eEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccc
Q 036314 22 LHDDWVSAVDGS-NPGFILTGCYDNLGRVWKAGG-VCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDA 99 (347)
Q Consensus 22 ~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~~-~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~ 99 (347)
.|.+.|.+++++ ++.++++++.++.+..|.... .......+|...|.+++|+|++ ..|++++ ||+|++||+..
T Consensus 7 ~~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~----~~l~~~~-dg~i~iw~~~~ 81 (337)
T 1gxr_A 7 MGSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPT----RHVYTGG-KGCVKVWDISH 81 (337)
T ss_dssp EEEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSS----SEEEEEC-BSEEEEEETTS
T ss_pred ccCCceeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCC----cEEEEcC-CCeEEEEECCC
Confidence 356789999998 566888888777777776543 3333455899999999999854 3688888 99999999986
Q ss_pred cccccCccccceeeeee--ccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccccc
Q 036314 100 EELVNHPKKIRSFKILR--GHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGE 177 (347)
Q Consensus 100 ~~~~~~~~~~~~~~~~~--~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (347)
++.. ..+..+. +|..+|.+++|+|+++++++++.|+.|++||+.+... .
T Consensus 82 ~~~~------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~-----------------------~ 132 (337)
T 1gxr_A 82 PGNK------SPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTP-----------------------R 132 (337)
T ss_dssp TTCC------SCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC-------------------------E
T ss_pred CCce------eeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCc-----------------------c
Confidence 5422 1222333 7999999999999999999999999999999875421 1
Q ss_pred ccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeeee-CeeeEEEEeeCCCCcEEEEecCCCcEEEEe
Q 036314 178 AISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFC-GKALNCIDIGGEGSALIAAGGSDPILRIWD 255 (347)
Q Consensus 178 ~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~la~~~~d~~i~iwd 255 (347)
....+..|...+.++.| ++++.+++++.|+.|++||+++++.+..+.. ...+.+++++++ +..+++++.|+.|++||
T Consensus 133 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~dg~i~~~d 211 (337)
T 1gxr_A 133 IKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISND-GTKLWTGGLDNTVRSWD 211 (337)
T ss_dssp EEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTT-SSEEEEEETTSEEEEEE
T ss_pred eeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCC-CCEEEEEecCCcEEEEE
Confidence 23456678888999998 5778899999999999999999887776653 457889999765 46888999999999999
Q ss_pred CCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeecC-CCEEEEccC
Q 036314 256 PRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGV 334 (347)
Q Consensus 256 ~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~ 334 (347)
++... ....+ .|...+.+++|+|++. +|++++.|+.|++||+++++ ...+..|.+.|.++.|+| +++|++++.
T Consensus 212 ~~~~~---~~~~~-~~~~~v~~~~~s~~~~-~l~~~~~~~~i~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 285 (337)
T 1gxr_A 212 LREGR---QLQQH-DFTSQIFSLGYCPTGE-WLAVGMESSNVEVLHVNKPD-KYQLHLHESCVLSLKFAYCGKWFVSTGK 285 (337)
T ss_dssp TTTTE---EEEEE-ECSSCEEEEEECTTSS-EEEEEETTSCEEEEETTSSC-EEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred CCCCc---eEeee-cCCCceEEEEECCCCC-EEEEEcCCCcEEEEECCCCC-eEEEcCCccceeEEEECCCCCEEEEecC
Confidence 97532 23333 4778899999999986 59999999999999999875 456788999999999985 778999999
Q ss_pred CceEEEeecc
Q 036314 335 DSKLCVSSGV 344 (347)
Q Consensus 335 D~~v~vw~~~ 344 (347)
|+.|++|+..
T Consensus 286 dg~i~~~~~~ 295 (337)
T 1gxr_A 286 DNLLNAWRTP 295 (337)
T ss_dssp TSEEEEEETT
T ss_pred CCcEEEEECC
Confidence 9999999865
No 82
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=5.6e-34 Score=259.14 Aligned_cols=286 Identities=16% Similarity=0.251 Sum_probs=215.5
Q ss_pred CCCCcCCceeeccCCC--CCEEEEEecCCeEEEEcCCC-eEEEEe-------------eccCCceEEEEEeecCCCceEE
Q 036314 19 EPSLHDDWVSAVDGSN--PGFILTGCYDNLGRVWKAGG-VCTHIL-------------EGHCGAVSSVNIIKSDGLKYVT 82 (347)
Q Consensus 19 ~~~~h~~~v~~~~~~~--~~~l~sg~~d~~i~iw~~~~-~~~~~l-------------~~h~~~V~~v~~~~~~~~~~~~ 82 (347)
...+|.+.|+++++++ +.+||+|+.||+|++||... .....+ .+|...|.+++|+|.++ ..
T Consensus 38 ~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---~~ 114 (408)
T 4a11_B 38 VERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDT---GM 114 (408)
T ss_dssp ECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCT---TC
T ss_pred eeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCC---cE
Confidence 4567999999999875 56999999999999999742 211111 25999999999998443 26
Q ss_pred EEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCC---CCEEEEeeCCCcEEEEecCCCCCCCccce
Q 036314 83 VATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETS---GNMVCSGSWDCTISLWRTNDSDAAGNQVS 159 (347)
Q Consensus 83 l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~---~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~ 159 (347)
|++++.||+|++||+..++. ...+ .|...+.++.+++. +.++++++.|+.|++||+.+.
T Consensus 115 l~s~~~d~~i~iwd~~~~~~---------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~-------- 176 (408)
T 4a11_B 115 FTSSSFDKTLKVWDTNTLQT---------ADVF-NFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSG-------- 176 (408)
T ss_dssp EEEEETTSEEEEEETTTTEE---------EEEE-ECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSS--------
T ss_pred EEEEeCCCeEEEeeCCCCcc---------ceec-cCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCc--------
Confidence 89999999999999986542 2233 36788999999885 459999999999999998753
Q ss_pred eeeccCCCccccccccccccccccCCccceEEEEeC-CCC-eEEEEecCCcEEEEECCCCc-eeeee-------------
Q 036314 160 IKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP-QQE-TIYSASWDHSVRTWDVEMGK-DLSDI------------- 223 (347)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~-~l~s~s~dg~v~vwd~~~~~-~~~~~------------- 223 (347)
..+..+.+|...|.++.|. ++. .+++++.||.|++||++.+. .+..+
T Consensus 177 -----------------~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 239 (408)
T 4a11_B 177 -----------------SCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVES 239 (408)
T ss_dssp -----------------CCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTT
T ss_pred -----------------ceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeecc
Confidence 2345667899999999984 556 48899999999999998765 22222
Q ss_pred ---eeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeE--EecCCCCCeeEEEeCCCCCeEEEEEeCCCcEE
Q 036314 224 ---FCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVF--QFSSHNSWISACKWHNKSWFHLISASYDGKVM 298 (347)
Q Consensus 224 ---~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~--~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~ 298 (347)
.+...+.+++++++ +..+++++.|+.|++||++......... ........+ .+.+.......++.++.|+.|+
T Consensus 240 ~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~ 317 (408)
T 4a11_B 240 ANTAHNGKVNGLCFTSD-GLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGL-KFTVSCGCSSEFVFVPYGSTIA 317 (408)
T ss_dssp SSCSCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCC-CCEECCSSSSCEEEEEETTEEE
T ss_pred ccccccCceeEEEEcCC-CCEEEEecCCCeEEEEECCCCccceeccccccccccccc-eeEEecCCCceEEEEecCCEEE
Confidence 12346889999764 5688899999999999997543211100 000111111 1222222223577888999999
Q ss_pred EEEcCCCccceeecCCCCeEEEEeecC-CCEEEEccCCceEEEeecc
Q 036314 299 LWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 299 lwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~D~~v~vw~~~ 344 (347)
+||+++++.+..+.+|.+.|.+++|+| +++|++++.||+|++|+..
T Consensus 318 v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~ 364 (408)
T 4a11_B 318 VYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPS 364 (408)
T ss_dssp EEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEEC
T ss_pred EEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCC
Confidence 999999999999999999999999985 6789999999999999875
No 83
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.2e-34 Score=299.31 Aligned_cols=306 Identities=18% Similarity=0.246 Sum_probs=239.9
Q ss_pred CCCcCCceeeccCC-CCCEEEEEecCCeEEEEcCC-CeEEEE--------------------------------------
Q 036314 20 PSLHDDWVSAVDGS-NPGFILTGCYDNLGRVWKAG-GVCTHI-------------------------------------- 59 (347)
Q Consensus 20 ~~~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~-~~~~~~-------------------------------------- 59 (347)
..+|.+.|++++++ ++.+|++++.||+|++||.. +.....
T Consensus 739 ~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~ 818 (1249)
T 3sfz_A 739 MFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAK 818 (1249)
T ss_dssp ECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEET
T ss_pred ecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcC
Confidence 45799999999998 46799999999999999863 322211
Q ss_pred -----------------eeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccce
Q 036314 60 -----------------LEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASV 122 (347)
Q Consensus 60 -----------------l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V 122 (347)
..+|...|.+++|+|++. .+++++.|++|++|++.+++ ....+.+|...|
T Consensus 819 ~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~----~l~~~~~dg~v~vwd~~~~~---------~~~~~~~h~~~v 885 (1249)
T 3sfz_A 819 NKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDH----LAVIALSQYCVELWNIDSRL---------KVADCRGHLSWV 885 (1249)
T ss_dssp TEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTT----EEEEECSSSCEEEEETTTTE---------EEEEECCCSSCE
T ss_pred CcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCC----EEEEEeCCCeEEEEEcCCCc---------eeeecCCCccce
Confidence 127888899999998543 68999999999999997653 456778999999
Q ss_pred EEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCcc-------------------------------------------ce
Q 036314 123 HSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQ-------------------------------------------VS 159 (347)
Q Consensus 123 ~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~-------------------------------------------~~ 159 (347)
.+++|+|+++++++++.|++|++|++......... ..
T Consensus 886 ~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 965 (1249)
T 3sfz_A 886 HGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVS 965 (1249)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEE
T ss_pred EEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEE
Confidence 99999999999999999999999996531100000 00
Q ss_pred -eeeccCCC---------cccc-ccccccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeeeeCe
Q 036314 160 -IKKRKGNN---------QVEE-PQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGK 227 (347)
Q Consensus 160 -~~~~~~~~---------~~~~-~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~ 227 (347)
....+... .+.. ....+.....+.+|...|.+++| ++++.|++++.|++|++||+.++..........
T Consensus 966 ~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 1045 (1249)
T 3sfz_A 966 CCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQE 1045 (1249)
T ss_dssp EEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEECCBCCSS
T ss_pred EEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEEEecCCC
Confidence 00000000 0000 00123344566789999999998 577899999999999999999987765444556
Q ss_pred eeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCcc
Q 036314 228 ALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWP 307 (347)
Q Consensus 228 ~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~ 307 (347)
.+.++.+.++ ..+++++.|+.|++||+... .....+.+|...|.+++|+|++. +|++++.|++|++||+.++.+
T Consensus 1046 ~v~~~~~~~~--~~l~~~~~dg~v~vwd~~~~---~~~~~~~~~~~~v~~~~~s~d~~-~l~s~s~d~~v~iwd~~~~~~ 1119 (1249)
T 3sfz_A 1046 TVKDFRLLQD--SRLLSWSFDGTVKVWNVITG---RIERDFTCHQGTVLSCAISSDAT-KFSSTSADKTAKIWSFDLLSP 1119 (1249)
T ss_dssp CEEEEEECSS--SEEEEEESSSEEEEEETTTT---CCCEEEECCSSCCCCEEECSSSS-SCEEECCSSCCCEECSSSSSC
T ss_pred cEEEEEEcCC--CcEEEEECCCcEEEEECCCC---ceeEEEcccCCcEEEEEECCCCC-EEEEEcCCCcEEEEECCCcce
Confidence 7888888764 35778899999999999753 34677889999999999999986 499999999999999999999
Q ss_pred ceeecCCCCeEEEEeecC-CCEEEEccCCceEEEeecc
Q 036314 308 LSVIDSHKDKVLCADWWR-GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 308 ~~~~~~h~~~v~~~~~~~-~~~l~s~s~D~~v~vw~~~ 344 (347)
+..+.+|.+.|.+++|+| |++||+++.||+|+||+..
T Consensus 1120 ~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~ 1157 (1249)
T 3sfz_A 1120 LHELKGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVS 1157 (1249)
T ss_dssp SBCCCCCSSCEEEEEECSSSSEEEEEETTSCCCEEESS
T ss_pred eeeeccCCCcEEEEEECCCCCEEEEEeCCCEEEEEECC
Confidence 999999999999999985 7789999999999999865
No 84
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-34 Score=258.37 Aligned_cols=254 Identities=16% Similarity=0.191 Sum_probs=203.3
Q ss_pred CCCCcCCceeeccCC-CCCEEEEEecCCeEEEEcCC---CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEE
Q 036314 19 EPSLHDDWVSAVDGS-NPGFILTGCYDNLGRVWKAG---GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRL 94 (347)
Q Consensus 19 ~~~~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~---~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~ 94 (347)
...+|++.|++++++ ++.+||+|+.|++|++|+.. +.....+.+|.+.|.+++|+++. ++..|++++.||+|++
T Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~~~~l~s~~~dg~v~i 83 (379)
T 3jrp_A 6 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPK--FGTILASCSYDGKVLI 83 (379)
T ss_dssp CEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGG--GCSEEEEEETTSCEEE
T ss_pred EecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCC--CCCEEEEeccCCEEEE
Confidence 456899999999998 56799999999999999974 35667899999999999998742 1347999999999999
Q ss_pred EeccccccccCccccceeeeeeccccceEEEEEeCC--CCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccc
Q 036314 95 WKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETS--GNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEP 172 (347)
Q Consensus 95 wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~--~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (347)
||+..++. .....+.+|...|.+++|+|+ ++++++++.|++|++||+.....
T Consensus 84 wd~~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~------------------- 137 (379)
T 3jrp_A 84 WKEENGRW-------SQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGT------------------- 137 (379)
T ss_dssp EEEETTEE-------EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSC-------------------
T ss_pred EEcCCCce-------eEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCc-------------------
Confidence 99986531 245567789999999999999 99999999999999999875421
Q ss_pred cccccccccccCCccceEEEEeC--------------CCCeEEEEecCCcEEEEECCCCceee----eee-eCeeeEEEE
Q 036314 173 QLEGEAISTLVGHTQCVSSVVWP--------------QQETIYSASWDHSVRTWDVEMGKDLS----DIF-CGKALNCID 233 (347)
Q Consensus 173 ~~~~~~~~~~~~h~~~v~~~~~~--------------~~~~l~s~s~dg~v~vwd~~~~~~~~----~~~-~~~~~~~~~ 233 (347)
.....+.+|...|.++.|. ++..+++++.|+.|++||++.+.... .+. +...+.+++
T Consensus 138 ----~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~ 213 (379)
T 3jrp_A 138 ----TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVA 213 (379)
T ss_dssp ----CCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEE
T ss_pred ----eeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEE
Confidence 1122456788899999984 37889999999999999998765332 222 245789999
Q ss_pred eeCCC--CcEEEEecCCCcEEEEeCCCCCCCCCeE--EecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCC
Q 036314 234 IGGEG--SALIAAGGSDPILRIWDPRKPGTSAPVF--QFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTA 305 (347)
Q Consensus 234 ~~~~~--~~~la~~~~d~~i~iwd~~~~~~~~~~~--~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~ 305 (347)
++|++ +.++++++.|+.|++||++......... ....|...|.+++|+|++. +|++++.||.|++||++.+
T Consensus 214 ~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~dg~i~iw~~~~~ 288 (379)
T 3jrp_A 214 WSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGN-VLALSGGDNKVTLWKENLE 288 (379)
T ss_dssp ECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSC-CEEEEESSSSEEEEEEEET
T ss_pred ECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCC-EEEEecCCCcEEEEeCCCC
Confidence 98764 6789999999999999987643221122 2234888999999999986 5999999999999999843
No 85
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=2.2e-34 Score=275.84 Aligned_cols=275 Identities=17% Similarity=0.201 Sum_probs=226.7
Q ss_pred CCCCcCCc-eeeccCCC--C-CEEEEEecCCeEEEEcCC-C--------eEEEEeeccCCceEEEEEeecCCCceEEEEE
Q 036314 19 EPSLHDDW-VSAVDGSN--P-GFILTGCYDNLGRVWKAG-G--------VCTHILEGHCGAVSSVNIIKSDGLKYVTVAT 85 (347)
Q Consensus 19 ~~~~h~~~-v~~~~~~~--~-~~l~sg~~d~~i~iw~~~-~--------~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s 85 (347)
...+|.+. |+++++++ + .+||+|+.||+|++||.. + .....+.+|...|.+++|+|++ ..|++
T Consensus 58 ~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~----~~l~~ 133 (615)
T 1pgu_A 58 QFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEG----RRLCV 133 (615)
T ss_dssp EECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTS----SEEEE
T ss_pred EEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCC----CEEEE
Confidence 35689999 99999876 4 599999999999999973 3 5677888999999999999854 36888
Q ss_pred ccCC----CcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCC-EEEEeeCCCcEEEEecCCCCCCCcccee
Q 036314 86 ASKD----QTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGN-MVCSGSWDCTISLWRTNDSDAAGNQVSI 160 (347)
Q Consensus 86 ~s~D----g~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~-~l~sgs~Dg~I~iwd~~~~~~~~~~~~~ 160 (347)
++.| +.|++||.. +....+.+|...|.+++|+|+++ ++++++.|++|++||+.+.
T Consensus 134 ~~~~~~~~~~v~~~d~~-----------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~--------- 193 (615)
T 1pgu_A 134 VGEGRDNFGVFISWDSG-----------NSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPF--------- 193 (615)
T ss_dssp EECCSSCSEEEEETTTC-----------CEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTB---------
T ss_pred eccCCCCccEEEEEECC-----------CcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCc---------
Confidence 8888 789999832 24556789999999999999998 8999999999999997642
Q ss_pred eeccCCCccccccccccccccccCCcc---ceEEEEe-CC-CCeEEEEecCCcEEEEECCCCceeeee-----eeCeeeE
Q 036314 161 KKRKGNNQVEEPQLEGEAISTLVGHTQ---CVSSVVW-PQ-QETIYSASWDHSVRTWDVEMGKDLSDI-----FCGKALN 230 (347)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~h~~---~v~~~~~-~~-~~~l~s~s~dg~v~vwd~~~~~~~~~~-----~~~~~~~ 230 (347)
+.+..+.+|.. .|.+++| |+ +++|++++.|+.|++||+++++.+..+ .+...+.
T Consensus 194 ----------------~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~ 257 (615)
T 1pgu_A 194 ----------------KFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIF 257 (615)
T ss_dssp ----------------EEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEE
T ss_pred ----------------ceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceE
Confidence 33556778888 9999998 56 788999999999999999999888877 3455788
Q ss_pred EEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCC----CCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCc
Q 036314 231 CIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSH----NSWISACKWHNKSWFHLISASYDGKVMLWDLRTAW 306 (347)
Q Consensus 231 ~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h----~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~ 306 (347)
++.+. ++..+++++.|+.|++||++.. .....+..+ ...+.++.|+ ++. +|++++.|+.|++||+++++
T Consensus 258 ~~~~~--~~~~l~~~~~d~~i~~wd~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~-~l~~~~~~g~i~~~d~~~~~ 330 (615)
T 1pgu_A 258 ALSWL--DSQKFATVGADATIRVWDVTTS---KCVQKWTLDKQQLGNQQVGVVAT-GNG-RIISLSLDGTLNFYELGHDE 330 (615)
T ss_dssp EEEES--SSSEEEEEETTSEEEEEETTTT---EEEEEEECCTTCGGGCEEEEEEE-ETT-EEEEEETTSCEEEEETTEEE
T ss_pred EEEEc--CCCEEEEEcCCCcEEEEECCCC---cEEEEEcCCCCcccCceeEEEeC-CCC-eEEEEECCCCEEEEECCCCc
Confidence 99997 5678899999999999999753 235566555 3567888885 554 69999999999999999988
Q ss_pred cceeecCCCCeEEEEeecCCCEEEEccCCceEEEeec
Q 036314 307 PLSVIDSHKDKVLCADWWRGDSVISGGVDSKLCVSSG 343 (347)
Q Consensus 307 ~~~~~~~h~~~v~~~~~~~~~~l~s~s~D~~v~vw~~ 343 (347)
++..+.+|.+.|.+++| |. |++++.|++|++|+.
T Consensus 331 ~~~~~~~~~~~v~~~~~-~~--l~~~~~dg~i~~w~~ 364 (615)
T 1pgu_A 331 VLKTISGHNKGITALTV-NP--LISGSYDGRIMEWSS 364 (615)
T ss_dssp EEEEECCCSSCEEEEET-TT--TEEEETTSCEEETTT
T ss_pred EEEEEeCCCCCEEEEEe-cC--cEEECCCCeEEEEEc
Confidence 88888888888888888 65 777777777777763
No 86
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.2e-35 Score=276.00 Aligned_cols=239 Identities=10% Similarity=0.075 Sum_probs=178.9
Q ss_pred EEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCC------CCEEEEeeCCCcEEEEecCCCCCCC
Q 036314 82 TVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETS------GNMVCSGSWDCTISLWRTNDSDAAG 155 (347)
Q Consensus 82 ~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~------~~~l~sgs~Dg~I~iwd~~~~~~~~ 155 (347)
.+++++.|++|+||++.++++. .....++.+|.+.|.+++|+|+ +.+||+++.||+|+|||+.......
T Consensus 175 ~laS~s~D~tI~iWd~~~~~~~-----~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~ 249 (524)
T 2j04_B 175 MFDKEKHSSCIQIFKMNTSTLH-----CVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDV 249 (524)
T ss_dssp -------CEEEEEEEEETTTCC-----EEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSS
T ss_pred hhccCCCCceEEEEEccCCCCC-----ceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCcccc
Confidence 3456778999999999765421 1122346678899999999987 5799999999999999997543210
Q ss_pred ccceeeeccCCCccccccccccccccccCCccceEEEEeCCCCeEEEEecCCcEEEEECCCCcee-eeee-eCeeeEEEE
Q 036314 156 NQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDL-SDIF-CGKALNCID 233 (347)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~-~~~~-~~~~~~~~~ 233 (347)
.... ........+.+|...|.+++|.++..|++|+.||+|++||++++... ..+. +...+.+++
T Consensus 250 ~~~~--------------~~~~p~~~l~~h~~~v~sv~~s~~~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~ 315 (524)
T 2j04_B 250 HVFK--------------MCEKPSLTLSLADSLITTFDFLSPTTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVS 315 (524)
T ss_dssp SEEE--------------CCCSCSEEECCTTTCEEEEEESSSSEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEE
T ss_pred ccce--------------eecCceEEEEcCCCCEEEEEecCCCeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEE
Confidence 0000 00112346778999999999976678999999999999999876433 3333 345788884
Q ss_pred -eeCCCC-cEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCC--CeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccce
Q 036314 234 -IGGEGS-ALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNS--WISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLS 309 (347)
Q Consensus 234 -~~~~~~-~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~--~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~ 309 (347)
..++++ .+||+++.|++|+|||++... ....+.+|.. .|.+++|+|++.. |++++.|++|++||++++..+.
T Consensus 316 ~~~s~~g~~~laS~S~D~tvklWD~~~~~---~~~~~~~~~~~~~v~~v~fsp~~~~-l~s~~~d~tv~lwd~~~~~~~~ 391 (524)
T 2j04_B 316 TAYSDFEDTVVSTVAVDGYFYIFNPKDIA---TTKTTVSRFRGSNLVPVVYCPQIYS-YIYSDGASSLRAVPSRAAFAVH 391 (524)
T ss_dssp EECCTTSCCEEEEEETTSEEEEECGGGHH---HHCEEEEECSCCSCCCEEEETTTTE-EEEECSSSEEEEEETTCTTCCE
T ss_pred EEcCCCCCeEEEEeccCCeEEEEECCCCC---cccccccccccCcccceEeCCCcCe-EEEeCCCCcEEEEECcccccce
Confidence 224444 789999999999999997532 2334555653 4789999999864 9999999999999999998888
Q ss_pred eecCCCCeEEEEeecC-CCEEEEccCCceEEEeec
Q 036314 310 VIDSHKDKVLCADWWR-GDSVISGGVDSKLCVSSG 343 (347)
Q Consensus 310 ~~~~h~~~v~~~~~~~-~~~l~s~s~D~~v~vw~~ 343 (347)
++.+|.+.|++++|+| |..|||||.|++|+||+.
T Consensus 392 ~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~ 426 (524)
T 2j04_B 392 PLVSRETTITAIGVSRLHPMVLAGSADGSLIITNA 426 (524)
T ss_dssp EEEECSSCEEEEECCSSCCBCEEEETTTEEECCBS
T ss_pred eeecCCCceEEEEeCCCCCeEEEEECCCEEEEEec
Confidence 8999999999999986 678999999999999974
No 87
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-33 Score=246.53 Aligned_cols=244 Identities=22% Similarity=0.335 Sum_probs=205.7
Q ss_pred eEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEE
Q 036314 55 VCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMV 134 (347)
Q Consensus 55 ~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l 134 (347)
+..+.+.+|.+.|.+++| +++. .|++++.||+|++||+.+++ ....+..|...|.+++|+|+++++
T Consensus 9 ~~~~~l~~h~~~v~~~~~-~~~~----~l~s~~~dg~v~vw~~~~~~---------~~~~~~~~~~~v~~~~~~~~~~~l 74 (313)
T 3odt_A 9 QLSATLKGHDQDVRDVVA-VDDS----KVASVSRDGTVRLWSKDDQW---------LGTVVYTGQGFLNSVCYDSEKELL 74 (313)
T ss_dssp EEEEEECCCSSCEEEEEE-EETT----EEEEEETTSEEEEEEESSSE---------EEEEEEECSSCEEEEEEETTTTEE
T ss_pred HHHHHhhCCCCCcEEEEe-cCCC----EEEEEEcCCcEEEEECCCCE---------EEEEeecCCccEEEEEECCCCCEE
Confidence 567889999999999999 6443 69999999999999987653 345677899999999999999999
Q ss_pred EEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeCCCCeEEEEecCCcEEEEEC
Q 036314 135 CSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDV 214 (347)
Q Consensus 135 ~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~dg~v~vwd~ 214 (347)
++++.|+.|++|++.+... ...+..+.+|...|.++.| +++.+++++.|+.|++||
T Consensus 75 ~~~~~dg~i~~~~~~~~~~----------------------~~~~~~~~~~~~~i~~~~~-~~~~l~~~~~d~~i~~~d- 130 (313)
T 3odt_A 75 LFGGKDTMINGVPLFATSG----------------------EDPLYTLIGHQGNVCSLSF-QDGVVISGSWDKTAKVWK- 130 (313)
T ss_dssp EEEETTSCEEEEETTCCTT----------------------SCC-CEECCCSSCEEEEEE-ETTEEEEEETTSEEEEEE-
T ss_pred EEecCCCeEEEEEeeecCC----------------------CCcccchhhcccCEEEEEe-cCCEEEEEeCCCCEEEEc-
Confidence 9999999999999875321 1234567789999999998 678999999999999999
Q ss_pred CCCceeeeee-eCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecC-CCCCeeEEEeCCCCCeEEEEEe
Q 036314 215 EMGKDLSDIF-CGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSS-HNSWISACKWHNKSWFHLISAS 292 (347)
Q Consensus 215 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~-h~~~v~~v~~s~~~~~~l~s~s 292 (347)
.+.....+. ....+.++.+.+.++..+++++.|+.|++||.. .....+.. |...+.+++|+|++. |++++
T Consensus 131 -~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~-----~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~ 202 (313)
T 3odt_A 131 -EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQND-----KVIKTFSGIHNDVVRHLAVVDDGH--FISCS 202 (313)
T ss_dssp -TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETT-----EEEEEECSSCSSCEEEEEEEETTE--EEEEE
T ss_pred -CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecC-----ceEEEEeccCcccEEEEEEcCCCe--EEEcc
Confidence 444444444 345678888887677789999999999999943 23456666 899999999999983 99999
Q ss_pred CCCcEEEEEcCCCccceeecCCCCeEEEEeecCCCEEEEccCCceEEEeecc
Q 036314 293 YDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 293 ~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~D~~v~vw~~~ 344 (347)
.|+.|++||+++++.+..+.+|.+.|.+++|+|..+|++++.|++|++|+..
T Consensus 203 ~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~v~iwd~~ 254 (313)
T 3odt_A 203 NDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNGDIVSCGEDRTVRIWSKE 254 (313)
T ss_dssp TTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSCEEEEETTSEEEEECTT
T ss_pred CCCeEEEEECCchhhhhhhhcCCceEEEEEEecCCCEEEEecCCEEEEEECC
Confidence 9999999999999999999999999999999976689999999999999864
No 88
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=1.1e-33 Score=260.57 Aligned_cols=264 Identities=22% Similarity=0.313 Sum_probs=211.6
Q ss_pred EEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccC-ccccceeeeeeccccceEEEEEeCCCC-EEE
Q 036314 58 HILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNH-PKKIRSFKILRGHKASVHSIAAETSGN-MVC 135 (347)
Q Consensus 58 ~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~-~~~~~~~~~~~~h~~~V~~v~~s~~~~-~l~ 135 (347)
..+.+|.+.|++++|+|.+ ...|++++.||+|++|++........ ....++...+.+|...|.+++|+|++. +|+
T Consensus 122 ~~~~~h~~~v~~l~~~p~~---~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~ 198 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQN---ACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLL 198 (430)
T ss_dssp EEEEEESSCCSEEEEETTE---EEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEE
T ss_pred EEEEcCCCcEEEEEECCCC---CcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEE
Confidence 4567899999999999842 35799999999999999975211100 011345667889999999999999998 999
Q ss_pred EeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeC--CCCeEEEEecCCcEEEEE
Q 036314 136 SGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP--QQETIYSASWDHSVRTWD 213 (347)
Q Consensus 136 sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~l~s~s~dg~v~vwd 213 (347)
+|+.||+|++|++......... ......+.+|...|.+++|. .+..|++++.|+.|++||
T Consensus 199 s~~~dg~i~vwd~~~~~~~~~~------------------~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d 260 (430)
T 2xyi_A 199 SASDDHTICLWDINATPKEHRV------------------IDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWD 260 (430)
T ss_dssp EECTTSCEEEEETTSCCBGGGE------------------EECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEE
T ss_pred EEeCCCeEEEEeCCCCCCCCce------------------eccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEE
Confidence 9999999999998763211000 01234566899999999995 456789999999999999
Q ss_pred CCCC---ceeeeee-eCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEE
Q 036314 214 VEMG---KDLSDIF-CGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLI 289 (347)
Q Consensus 214 ~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~ 289 (347)
++++ ..+..+. +...+.+++|++.+..++++|+.|+.|++||++... .++..+.+|...|.++.|+|++..+|+
T Consensus 261 ~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~--~~~~~~~~h~~~v~~i~~sp~~~~~l~ 338 (430)
T 2xyi_A 261 TRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK--LKLHSFESHKDEIFQVQWSPHNETILA 338 (430)
T ss_dssp TTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTT--SCSEEEECCSSCEEEEEECSSCTTEEE
T ss_pred CCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCC--CCeEEeecCCCCEEEEEECCCCCCEEE
Confidence 9976 3444443 345789999998877789999999999999998633 346788899999999999999977899
Q ss_pred EEeCCCcEEEEEcCC--------------CccceeecCCCCeEEEEeecC-CC-EEEEccCCceEEEeecc
Q 036314 290 SASYDGKVMLWDLRT--------------AWPLSVIDSHKDKVLCADWWR-GD-SVISGGVDSKLCVSSGV 344 (347)
Q Consensus 290 s~s~D~~i~lwd~~~--------------~~~~~~~~~h~~~v~~~~~~~-~~-~l~s~s~D~~v~vw~~~ 344 (347)
+++.|++|+|||++. .+.+..+.+|.+.|.++.|+| +. .|++++.|++|+||+..
T Consensus 339 s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~ 409 (430)
T 2xyi_A 339 SSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMA 409 (430)
T ss_dssp EEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred EEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcc
Confidence 999999999999987 244566789999999999986 55 79999999999999864
No 89
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-34 Score=266.51 Aligned_cols=277 Identities=14% Similarity=0.141 Sum_probs=207.3
Q ss_pred CCEEEEEecCCeEEEEcCCCeEEEEe-eccCCceEEEEEee-cCCCceEEEEEccCCCcEEEEeccccccccCcccccee
Q 036314 35 PGFILTGCYDNLGRVWKAGGVCTHIL-EGHCGAVSSVNIIK-SDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSF 112 (347)
Q Consensus 35 ~~~l~sg~~d~~i~iw~~~~~~~~~l-~~h~~~V~~v~~~~-~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~ 112 (347)
+..+++++ .|+..+..+..+ .+|.+.|.+++|+| ++. .|++|+.||+|++||+...+.. ...+..
T Consensus 39 ~~~~~~~~------~w~~~g~~~~~~~~~h~~~V~~~~~s~~~~~----~l~s~s~dg~v~vwd~~~~~~~---~~~~~~ 105 (437)
T 3gre_A 39 QEIVRSPN------MGNLRGKLIATLMENEPNSITSSAVSPGETP----YLITGSDQGVIKIWNLKEIIVG---EVYSSS 105 (437)
T ss_dssp CCCCCCCC------GGGCCCCEEEEECTTTTSCEEEEEEECSSSC----EEEEEETTSEEEEEEHHHHHTT---CCCSCS
T ss_pred cccccccc------cccccceEEeeeccCCCCceEEEEECCCCCC----EEEEecCCceEEEeECcccccC---ccccee
Confidence 34555554 499889888888 89999999999999 543 6999999999999998752110 001122
Q ss_pred eeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccccccccccc--C--Cccc
Q 036314 113 KILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLV--G--HTQC 188 (347)
Q Consensus 113 ~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--h~~~ 188 (347)
..+ +|..+|.+++|+|++++|++|+.|++|++||++.... +...... .+..+..+. . +...
T Consensus 106 ~~~-~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~-~~~~~~~-------------~~~~i~~~~~~~~~~~~~ 170 (437)
T 3gre_A 106 LTY-DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQ-ESEVKFL-------------NCECIRKINLKNFGKNEY 170 (437)
T ss_dssp EEE-ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEE-TTEEEEE-------------EEEEEEEEEGGGGSSCCC
T ss_pred eec-cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccC-Cceeecc-------------ccceeEEEEccCcccccC
Confidence 222 5999999999999999999999999999999852100 0000000 001111111 1 4456
Q ss_pred eEEEEe---CCCCeEEEEecCCcEEEEECCCCceeeeeee---CeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCC
Q 036314 189 VSSVVW---PQQETIYSASWDHSVRTWDVEMGKDLSDIFC---GKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTS 262 (347)
Q Consensus 189 v~~~~~---~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~ 262 (347)
+.++.+ +++..|++++.|++|++||+++++.+..+.. ...+.+++++++ +.++++|+.|+.|++||++..
T Consensus 171 ~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~-~~~l~s~~~dg~i~iwd~~~~--- 246 (437)
T 3gre_A 171 AVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEE-CCVLILGTTRGIIDIWDIRFN--- 246 (437)
T ss_dssp EEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTT-SCEEEEEETTSCEEEEETTTT---
T ss_pred ceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCC-CCEEEEEcCCCeEEEEEcCCc---
Confidence 666653 4677899999999999999999988877764 357899999765 568899999999999999852
Q ss_pred CCeEEec-CCCCCeeEEEeCC----CCCeEEEEEeCCCcEEEEEcCCCccceeecC------------------------
Q 036314 263 APVFQFS-SHNSWISACKWHN----KSWFHLISASYDGKVMLWDLRTAWPLSVIDS------------------------ 313 (347)
Q Consensus 263 ~~~~~~~-~h~~~v~~v~~s~----~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~------------------------ 313 (347)
..+..+. +|...|.++.|+| ++ .+|++|+.|++|++||+++++.+..+.+
T Consensus 247 ~~~~~~~~~~~~~v~~~~~~~~~s~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 325 (437)
T 3gre_A 247 VLIRSWSFGDHAPITHVEVCQFYGKNS-VIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCG 325 (437)
T ss_dssp EEEEEEBCTTCEEEEEEEECTTTCTTE-EEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCC
T ss_pred cEEEEEecCCCCceEEEEeccccCCCc-cEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecc
Confidence 3455554 7788999996665 44 5799999999999999998876665553
Q ss_pred --CCCeEEEEeecCCCEEEEccCCceEEEeecc
Q 036314 314 --HKDKVLCADWWRGDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 314 --h~~~v~~~~~~~~~~l~s~s~D~~v~vw~~~ 344 (347)
|.+.|++++|+++++|++|+.|++|++|+..
T Consensus 326 ~~~~~~v~~l~~~~~~~l~s~~~d~~i~~wd~~ 358 (437)
T 3gre_A 326 IRSLNALSTISVSNDKILLTDEATSSIVMFSLN 358 (437)
T ss_dssp CCSGGGGCCEEEETTEEEEEEGGGTEEEEEETT
T ss_pred cccCCceEEEEECCceEEEecCCCCeEEEEECC
Confidence 5566888899877789999999999999864
No 90
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=2.5e-34 Score=261.75 Aligned_cols=273 Identities=16% Similarity=0.135 Sum_probs=186.9
Q ss_pred EEEEEecCCeEEEEcCC--------CeEE--EEeeccCCceEEEEEeecC----------------CCceEEEEEccCCC
Q 036314 37 FILTGCYDNLGRVWKAG--------GVCT--HILEGHCGAVSSVNIIKSD----------------GLKYVTVATASKDQ 90 (347)
Q Consensus 37 ~l~sg~~d~~i~iw~~~--------~~~~--~~l~~h~~~V~~v~~~~~~----------------~~~~~~l~s~s~Dg 90 (347)
.|+++|.|+.|++|+.. +... .....|...+..+.+.+.. ......|++++.|+
T Consensus 32 ~l~a~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~las~~~d~ 111 (393)
T 4gq1_A 32 NLLAIGHDTGITIYCASEEQTPGSTGLTLQELFTIQTGLPTLHLSFSSSCSYSENLHDGDGNVNSSPVYSLFLACVCQDN 111 (393)
T ss_dssp TEEEEEESSEEEEEEEEECCSSSCCSEEEEEEEEEECSSCEEEEEECTTCEEECC----------CCEEEEEEEEEETTS
T ss_pred CEEEEECCCCEEEEECCCCCcccccccceeeeEEEecCCCeeeEeecCCccccccccCCCcceeecCCCCCEEEEEeCCC
Confidence 35555568899999641 1111 1122344555555554211 11345799999999
Q ss_pred cEEEEeccccccccCccccceeeeeeccccceEEEEEeC--------CCCEEEEeeCCCcEEEEecCCCCCCCccceeee
Q 036314 91 TLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAET--------SGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKK 162 (347)
Q Consensus 91 ~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~--------~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~ 162 (347)
+||+||+..++.. ....+..+.+|++.|++++|+| |+++|+|||.|++|+|||+.+.
T Consensus 112 ~v~lw~~~~~~~~----~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~----------- 176 (393)
T 4gq1_A 112 TVRLIITKNETII----TQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDE----------- 176 (393)
T ss_dssp CEEEEEEETTEEE----EEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETT-----------
T ss_pred cEEEEECCCCccc----eeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCC-----------
Confidence 9999999876432 1224456789999999999997 8899999999999999998653
Q ss_pred ccCCCccccccccccccccccCCccceEEEEe-CCC-CeEEEEecCCcEEEEECCCCceeeeee----------------
Q 036314 163 RKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQ-ETIYSASWDHSVRTWDVEMGKDLSDIF---------------- 224 (347)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~-~~l~s~s~dg~v~vwd~~~~~~~~~~~---------------- 224 (347)
..+..+.+|...+.+++| |++ .+|++++.|++|++||+++++......
T Consensus 177 --------------~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~ 242 (393)
T 4gq1_A 177 --------------GPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTL 242 (393)
T ss_dssp --------------EEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESG
T ss_pred --------------ceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccc
Confidence 223455678889999998 455 479999999999999998875432211
Q ss_pred ----------eCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCC-------------------e
Q 036314 225 ----------CGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSW-------------------I 275 (347)
Q Consensus 225 ----------~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~-------------------v 275 (347)
....+.++.+.++++..+++++.|+++++||++.... ...+..|... +
T Consensus 243 ~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (393)
T 4gq1_A 243 PLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANND---YNEISDSTMKLGPKNLLPNVQGISLFPSLL 319 (393)
T ss_dssp GGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC----------------------CCSCSEEEECSSCCSS
T ss_pred cceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCC---CceEeeecCccccEEEccccccccccCcce
Confidence 1123566777777778899999999999999864321 1222223222 2
Q ss_pred eEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeecC-CCEEEEccCCceEEEee
Q 036314 276 SACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKLCVSS 342 (347)
Q Consensus 276 ~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~D~~v~vw~ 342 (347)
..+.+.+.+..++++|+.|++|+|||+++++....+.+|...|++++|+| |++||+++.||. .+|+
T Consensus 320 ~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~Gv-~lvr 386 (393)
T 4gq1_A 320 GACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGSV-LLTR 386 (393)
T ss_dssp CCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSEE-EEEE
T ss_pred eEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCe-EEEE
Confidence 22333333456788899999999999999988888888999999999985 788999987775 4443
No 91
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=4.8e-34 Score=263.30 Aligned_cols=252 Identities=14% Similarity=0.131 Sum_probs=188.4
Q ss_pred EEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeC-CCCEEEE
Q 036314 58 HILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAET-SGNMVCS 136 (347)
Q Consensus 58 ~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~-~~~~l~s 136 (347)
....+|...|++|+|+|..+ ..||+|+.||+|++||+..++. .....+.+|.++|++|+|+| ++++|+|
T Consensus 113 ~~~~~~~~~V~~l~~~P~~~---~~lasGs~dg~i~lWd~~~~~~-------~~~~~~~gH~~~V~~l~f~p~~~~~l~s 182 (435)
T 4e54_B 113 QKAAPFDRRATSLAWHPTHP---STVAVGSKGGDIMLWNFGIKDK-------PTFIKGIGAGGSITGLKFNPLNTNQFYA 182 (435)
T ss_dssp CEEEECSSCEEEEEECSSCT---TCEEEEETTSCEEEECSSCCSC-------CEEECCCSSSCCCCEEEECSSCTTEEEE
T ss_pred ccCCCCCCCEEEEEEeCCCC---CEEEEEeCCCEEEEEECCCCCc-------eeEEEccCCCCCEEEEEEeCCCCCEEEE
Confidence 34668999999999998544 2699999999999999976532 23345678999999999997 6899999
Q ss_pred eeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECC
Q 036314 137 GSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVE 215 (347)
Q Consensus 137 gs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~ 215 (347)
||.|++|++||++.... ........+...+.++.| +++.+|++++.||+|++||++
T Consensus 183 ~s~D~~v~iwd~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~ 239 (435)
T 4e54_B 183 SSMEGTTRLQDFKGNIL-----------------------RVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD 239 (435)
T ss_dssp ECSSSCEEEEETTSCEE-----------------------EEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS
T ss_pred EeCCCEEEEeeccCCce-----------------------eEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC
Confidence 99999999999864210 001111223345667776 678899999999999999986
Q ss_pred CCceeeeee-eCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCC
Q 036314 216 MGKDLSDIF-CGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYD 294 (347)
Q Consensus 216 ~~~~~~~~~-~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D 294 (347)
. +.+..+. +...+.+++|+|.+..++++++.|+.|++||++............+|...|.+++|+|++. +|++++.|
T Consensus 240 ~-~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~-~l~s~~~D 317 (435)
T 4e54_B 240 G-KELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGA-RLLTTDQK 317 (435)
T ss_dssp S-CBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSS-EEEEEESS
T ss_pred c-ceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCC-eeEEEcCC
Confidence 5 4444444 3457899999988888999999999999999986543333445568999999999999986 59999999
Q ss_pred CcEEEEEcCCCccceeecCCCCe------EEEEeecC-CCEEEE------------ccCCceEEEeecc
Q 036314 295 GKVMLWDLRTAWPLSVIDSHKDK------VLCADWWR-GDSVIS------------GGVDSKLCVSSGV 344 (347)
Q Consensus 295 ~~i~lwd~~~~~~~~~~~~h~~~------v~~~~~~~-~~~l~s------------~s~D~~v~vw~~~ 344 (347)
++|+|||++++.....+..|... +..+.|++ +..+++ +..+++|++|+..
T Consensus 318 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~ 386 (435)
T 4e54_B 318 SEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGN 386 (435)
T ss_dssp SCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSS
T ss_pred CEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECC
Confidence 99999999998877766555421 22334432 333333 3345689999865
No 92
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.4e-33 Score=255.88 Aligned_cols=248 Identities=17% Similarity=0.298 Sum_probs=202.0
Q ss_pred CcCCceeeccCC-CCCEEEEEecCCeEEEEcCC-CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccc
Q 036314 22 LHDDWVSAVDGS-NPGFILTGCYDNLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDA 99 (347)
Q Consensus 22 ~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~-~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~ 99 (347)
.|...|++++++ ++.+|++|+.||.|++||.. +..+..+.+|...|.++.|.+ ..|++++.||+|++||+..
T Consensus 132 ~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~------~~l~~~~~dg~i~i~d~~~ 205 (401)
T 4aez_A 132 DESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWNR------HVLSSGSRSGAIHHHDVRI 205 (401)
T ss_dssp CTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEET------TEEEEEETTSEEEEEETTS
T ss_pred CCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEECC------CEEEEEcCCCCEEEEeccc
Confidence 488999999998 56799999999999999975 678888999999999999943 2699999999999999874
Q ss_pred cccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccccccc
Q 036314 100 EELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAI 179 (347)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (347)
.. .....+.+|...|.+++|+|++++|++|+.|++|++||+.+. ...
T Consensus 206 ~~--------~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~-------------------------~~~ 252 (401)
T 4aez_A 206 AN--------HQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSS-------------------------IPK 252 (401)
T ss_dssp SS--------CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCS-------------------------SEE
T ss_pred Cc--------ceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCC-------------------------Ccc
Confidence 32 245678899999999999999999999999999999998753 234
Q ss_pred ccccCCccceEEEEeC-CCC-eEEEEe--cCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEE--ecCCCcEEE
Q 036314 180 STLVGHTQCVSSVVWP-QQE-TIYSAS--WDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAA--GGSDPILRI 253 (347)
Q Consensus 180 ~~~~~h~~~v~~~~~~-~~~-~l~s~s--~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~--~~~d~~i~i 253 (347)
..+.+|...|.+++|. ++. .+++++ .|+.|++||+++++.+..+.....+.++++++++. .+++ |+.|+.|++
T Consensus 253 ~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~g~~dg~i~v 331 (401)
T 4aez_A 253 FTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSK-EIMSTHGFPDNNLSI 331 (401)
T ss_dssp EEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSSCEEEEEECSSSS-EEEEEECTTTCEEEE
T ss_pred EEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEECCCCC-eEEEEeecCCCcEEE
Confidence 4567788999999984 454 556654 79999999999999888887777899999987655 5555 558999999
Q ss_pred EeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceee
Q 036314 254 WDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVI 311 (347)
Q Consensus 254 wd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~ 311 (347)
||+.... ......+.+|...|.+++|+|++. +|++++.||.|++||+.+++.+...
T Consensus 332 ~~~~~~~-~~~~~~~~~h~~~v~~~~~s~dg~-~l~s~~~dg~i~iw~~~~~~~~~~~ 387 (401)
T 4aez_A 332 WSYSSSG-LTKQVDIPAHDTRVLYSALSPDGR-ILSTAASDENLKFWRVYDGDHVKRP 387 (401)
T ss_dssp EEEETTE-EEEEEEEECCSSCCCEEEECTTSS-EEEEECTTSEEEEEECCC-------
T ss_pred EecCCcc-ceeEEEecCCCCCEEEEEECCCCC-EEEEEeCCCcEEEEECCCCcccccc
Confidence 9987532 233456789999999999999986 5999999999999999988766554
No 93
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=4.7e-34 Score=255.87 Aligned_cols=269 Identities=20% Similarity=0.276 Sum_probs=198.3
Q ss_pred CcCCceeeccCC-C----CCEEEEEecCCeEEEEcCC-CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEE
Q 036314 22 LHDDWVSAVDGS-N----PGFILTGCYDNLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLW 95 (347)
Q Consensus 22 ~h~~~v~~~~~~-~----~~~l~sg~~d~~i~iw~~~-~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~w 95 (347)
.|...|.+++++ + +.+|++|+.||+|++||.. +..+..+.+|...|.++.|+|.++ ..|++++.||+|++|
T Consensus 67 ~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~l~s~~~dg~i~iw 143 (366)
T 3k26_A 67 DADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDP---NLLLSVSKDHALRLW 143 (366)
T ss_dssp CTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCT---TEEEEEETTSCEEEE
T ss_pred CCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCC---CEEEEEeCCCeEEEE
Confidence 377889999987 3 3589999999999999975 678888999999999999998333 269999999999999
Q ss_pred eccccccccCccccceeeee---eccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccce---eeeccCCCcc
Q 036314 96 KFDAEELVNHPKKIRSFKIL---RGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVS---IKKRKGNNQV 169 (347)
Q Consensus 96 d~~~~~~~~~~~~~~~~~~~---~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~---~~~~~~~~~~ 169 (347)
|+..++ ....+ .+|...|.+++|+|++++|++++.|+.|++||+.+......... ..........
T Consensus 144 d~~~~~---------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (366)
T 3k26_A 144 NIQTDT---------LVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPF 214 (366)
T ss_dssp ETTTTE---------EEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCC
T ss_pred EeecCe---------EEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccc
Confidence 997654 23334 68999999999999999999999999999999875421100000 0000000000
Q ss_pred ccccccccccccccCCccceEEEEeCCCCeEEEEecCCcEEEEECCCCce--------------eeeeee-CeeeEEEEe
Q 036314 170 EEPQLEGEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKD--------------LSDIFC-GKALNCIDI 234 (347)
Q Consensus 170 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~dg~v~vwd~~~~~~--------------~~~~~~-~~~~~~~~~ 234 (347)
..............+|...|.++.|. ++.+++++.|+.|++||++++.. +..+.. ...+.++++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 293 (366)
T 3k26_A 215 ISQKIHFPDFSTRDIHRNYVDCVRWL-GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRF 293 (366)
T ss_dssp CCEEECCCSEEECSSCSSCCCEEEEE-TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCC
T ss_pred cceeeccCccccccCCcceEEEEEEc-CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEE
Confidence 00000111233455689999999987 78999999999999999987644 222222 235667777
Q ss_pred eCC-CCcEEEEecCCCcEEEEeCCCCCCCC-CeEEecCC--CCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCC
Q 036314 235 GGE-GSALIAAGGSDPILRIWDPRKPGTSA-PVFQFSSH--NSWISACKWHNKSWFHLISASYDGKVMLWDLRT 304 (347)
Q Consensus 235 ~~~-~~~~la~~~~d~~i~iwd~~~~~~~~-~~~~~~~h--~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~ 304 (347)
+++ ++.+|++++.|+.|++||++...... ....+.+| ...|.+++|+|++. +|++++.||.|++||+.+
T Consensus 294 s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 294 SMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSS-ILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp EECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSS-EEEEEETTSEEEEEEC--
T ss_pred cCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCC-eEEEEeCCCEEEEEEecC
Confidence 765 15788999999999999997543211 33467777 78999999999986 599999999999999853
No 94
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2e-34 Score=260.26 Aligned_cols=248 Identities=14% Similarity=0.153 Sum_probs=191.2
Q ss_pred EeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEee
Q 036314 59 ILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGS 138 (347)
Q Consensus 59 ~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs 138 (347)
.+..|.+.|.+++|+|++ .+|++++.|++|++||+.++. .+....+.+|..+|.+++|+|++++|++++
T Consensus 6 ~~~~~~~~v~~~~~s~~g----~~l~~~~~d~~i~iw~~~~~~-------~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s 74 (377)
T 3dwl_C 6 VLHILPKPSYEHAFNSQR----TEFVTTTATNQVELYEQDGNG-------WKHARTFSDHDKIVTCVDWAPKSNRIVTCS 74 (377)
T ss_dssp EEEECSSCCSCCEECSSS----SEEECCCSSSCBCEEEEETTE-------EEECCCBCCCSSCEEEEEECTTTCCEEEEE
T ss_pred eEecCCCcEEEEEECCCC----CEEEEecCCCEEEEEEccCCc-------eEEEEEEecCCceEEEEEEeCCCCEEEEEe
Confidence 344577889999999954 379999999999999997652 124456789999999999999999999999
Q ss_pred CCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCC
Q 036314 139 WDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMG 217 (347)
Q Consensus 139 ~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~ 217 (347)
.|++|++||+.+... ......+.+|...|.++.| |+++.|++++.|++|++||++.+
T Consensus 75 ~d~~v~vwd~~~~~~----------------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 132 (377)
T 3dwl_C 75 QDRNAYVYEKRPDGT----------------------WKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQE 132 (377)
T ss_dssp TTSSEEEC------C----------------------CCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC---
T ss_pred CCCeEEEEEcCCCCc----------------------eeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCc
Confidence 999999999876420 0123456679999999998 57788999999999999999887
Q ss_pred ce---eeeee--eCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCC---------------CCCCeEEecCCCCCeeE
Q 036314 218 KD---LSDIF--CGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPG---------------TSAPVFQFSSHNSWISA 277 (347)
Q Consensus 218 ~~---~~~~~--~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~---------------~~~~~~~~~~h~~~v~~ 277 (347)
+. ...+. +...+.+++++++ +.+|++++.|+.|++||++... .......+ +|...|.+
T Consensus 133 ~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~ 210 (377)
T 3dwl_C 133 NDWWVSKHLKRPLRSTILSLDWHPN-NVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHA 210 (377)
T ss_dssp --CCCCEEECSSCCSCEEEEEECTT-SSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEE
T ss_pred ccceeeeEeecccCCCeEEEEEcCC-CCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEE
Confidence 63 44444 3457899999765 5688999999999999985211 01123445 89999999
Q ss_pred EEeCCCCCeEEEEEeCCCcEEEEEcCCCcc----ceeecCCCCeEEEEeecC-CCEEEEccCCceEEEeec
Q 036314 278 CKWHNKSWFHLISASYDGKVMLWDLRTAWP----LSVIDSHKDKVLCADWWR-GDSVISGGVDSKLCVSSG 343 (347)
Q Consensus 278 v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~----~~~~~~h~~~v~~~~~~~-~~~l~s~s~D~~v~vw~~ 343 (347)
++|+|++. +|++++.|++|++||+++++. +..+.+|...|.+++|+| +++|++++.|+.+ +|..
T Consensus 211 ~~~sp~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~ 279 (377)
T 3dwl_C 211 VGFSPSGN-ALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQG 279 (377)
T ss_dssp EEECTTSS-CEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECC
T ss_pred EEECCCCC-EEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEe
Confidence 99999986 599999999999999999887 788899999999999985 6678888877766 5543
No 95
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.9e-34 Score=264.12 Aligned_cols=262 Identities=11% Similarity=0.048 Sum_probs=200.6
Q ss_pred CcCCceeeccCC-CCCEEEEEecCCeEEEEcCCCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEecccc
Q 036314 22 LHDDWVSAVDGS-NPGFILTGCYDNLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAE 100 (347)
Q Consensus 22 ~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~ 100 (347)
.-..+|.+++++ +|+++||+|.|++|| |. +..+.+.+|.+.|.+++|+|++ .++++++|+.+..
T Consensus 13 ~~~~~v~sv~~SpDG~~iASas~D~TV~--d~--~~~~~l~gh~~~v~~V~FsPdg-----------~~~~~~~~~~~~~ 77 (588)
T 2j04_A 13 EFEDWKNNLTWARDGTLYLTTFPDISIG--QP--KYAKDINCNSKNLFHVKEFPLE-----------FENKLDFELAQQN 77 (588)
T ss_dssp CCSSSSCCEEECTTSCEEEECSSSEEEE--EE--CCCSCCSSBGGGTEEEEEECCC-----------CCCTTTTSCCCSS
T ss_pred HhhccEEEEEECCCCCEEEEEcCCceee--cc--cccceecCCCccEEEEEECCCC-----------CcceEEEEeCCCc
Confidence 456899999998 566999999999999 63 2334558999999999999942 4666666654322
Q ss_pred ccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccc
Q 036314 101 ELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAIS 180 (347)
Q Consensus 101 ~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (347)
.. ..+ .|...|.+++|+|+|++||+++.||+|++|+.+. .+.
T Consensus 78 ~~----------~~~-~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~---------------------------~l~ 119 (588)
T 2j04_A 78 GL----------LNS-QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK---------------------------MLT 119 (588)
T ss_dssp CS----------STT-SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE---------------------------EEE
T ss_pred eE----------eec-CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc---------------------------eee
Confidence 11 111 4688899999999999999999999999998532 233
Q ss_pred cccCCcc-----ceEEEEe-CCCCeEEEEecCCcEEEEECCCCce-------eeeeee-----CeeeEEEEeeCCCCcEE
Q 036314 181 TLVGHTQ-----CVSSVVW-PQQETIYSASWDHSVRTWDVEMGKD-------LSDIFC-----GKALNCIDIGGEGSALI 242 (347)
Q Consensus 181 ~~~~h~~-----~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~-------~~~~~~-----~~~~~~~~~~~~~~~~l 242 (347)
.+. |.. .+.+++| |++++|++++.||+|++||+.++.. +..+.. ...+.+++|+|++ +
T Consensus 120 ~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg---L 195 (588)
T 2j04_A 120 NLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV---L 195 (588)
T ss_dssp ECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE---E
T ss_pred ecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc---E
Confidence 344 444 4899999 6889999999999999999988752 344432 2368999998764 6
Q ss_pred EEecCCCcEEEEeCCCCCCCCCeEEe-cCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEE
Q 036314 243 AAGGSDPILRIWDPRKPGTSAPVFQF-SSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCA 321 (347)
Q Consensus 243 a~~~~d~~i~iwd~~~~~~~~~~~~~-~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~ 321 (347)
++++.|+.|++||+..........++ .+|...|.+++|+ + ..||+++ |++|++||+.+++......+|.+.|+.+
T Consensus 196 aass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g-~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~v 271 (588)
T 2j04_A 196 VAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--D-YKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHII 271 (588)
T ss_dssp EEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--T-TEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEE
T ss_pred EEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--C-CEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEE
Confidence 77888999999998753311123456 4788999999999 3 3588887 6999999999876534334899999999
Q ss_pred ee--cCC-CEEEEccCCceEEEeeccc
Q 036314 322 DW--WRG-DSVISGGVDSKLCVSSGVS 345 (347)
Q Consensus 322 ~~--~~~-~~l~s~s~D~~v~vw~~~~ 345 (347)
.| +++ ..|++++.||+ +||...+
T Consensus 272 a~~~s~d~~~La~a~edG~-klw~~d~ 297 (588)
T 2j04_A 272 PLNHEKESTILLMSNKTSY-KVLLEDE 297 (588)
T ss_dssp EETTCSSCEEEEECSSCEE-EEEESSS
T ss_pred EeeeCCCCCEEEEEcCCCC-EEEeecc
Confidence 99 764 57999999999 9998653
No 96
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=3e-32 Score=239.68 Aligned_cols=248 Identities=19% Similarity=0.283 Sum_probs=200.3
Q ss_pred CCCcCCceeeccCC-CCCEEEEEecCCeEEEEcCC-CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEec
Q 036314 20 PSLHDDWVSAVDGS-NPGFILTGCYDNLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKF 97 (347)
Q Consensus 20 ~~~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~-~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~ 97 (347)
..+|...|++++++ ++++|||||.|++|++|+.. +++++.+.+|...+.++.+.+ ..+++++.++.+++|+.
T Consensus 63 ~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~------~~l~s~~~~~~~~~~~~ 136 (318)
T 4ggc_A 63 MEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNS------YILSSGSRSGHIHHHDV 136 (318)
T ss_dssp CCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEET------TEEEEEETTSEEEEEET
T ss_pred ecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCC------CEEEEEecCCceEeeec
Confidence 34788999999998 56799999999999999975 788899999999988876643 26899999999999997
Q ss_pred cccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccccc
Q 036314 98 DAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGE 177 (347)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (347)
.... .....+.+|...+..++++++++++++++.|++|++||+.++.... .
T Consensus 137 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~---------------------~ 187 (318)
T 4ggc_A 137 RVAE--------HHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGW---------------------V 187 (318)
T ss_dssp TSSS--------CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBS---------------------C
T ss_pred CCCc--------eeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccc---------------------c
Confidence 6542 3456788999999999999999999999999999999987643211 1
Q ss_pred ccccccCCccceEEEEe-CCCC-e--EEEEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEE-ecCCCcEE
Q 036314 178 AISTLVGHTQCVSSVVW-PQQE-T--IYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAA-GGSDPILR 252 (347)
Q Consensus 178 ~~~~~~~h~~~v~~~~~-~~~~-~--l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~-~~~d~~i~ 252 (347)
.......|...|..+.+ +.+. . +++++.+++|++||.+.............+..+.+.+.+..++++ |+.|+.|+
T Consensus 188 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~ 267 (318)
T 4ggc_A 188 PLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLV 267 (318)
T ss_dssp CSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEE
T ss_pred ceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCEEE
Confidence 12234456777888887 3333 2 356788899999999988777666666678888888777665543 45899999
Q ss_pred EEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCc
Q 036314 253 IWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAW 306 (347)
Q Consensus 253 iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~ 306 (347)
+||++.. .++..+.+|.+.|.+++|+|++. +|||||.|++|+|||+....
T Consensus 268 iwd~~~~---~~~~~l~gH~~~V~~l~~spdg~-~l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 268 IWKYPTM---AKVAELKGHTSRVLSLTMSPDGA-TVASAAADETLRLWRCFELD 317 (318)
T ss_dssp EEETTTC---CEEEEECCCSSCEEEEEECTTSS-CEEEEETTTEEEEECCSCCC
T ss_pred EEECCCC---cEEEEEcCCCCCEEEEEEcCCCC-EEEEEecCCeEEEEECCCCC
Confidence 9999753 45788999999999999999986 59999999999999997654
No 97
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=4.1e-33 Score=253.16 Aligned_cols=254 Identities=17% Similarity=0.229 Sum_probs=206.6
Q ss_pred EEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCC----C
Q 036314 56 CTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETS----G 131 (347)
Q Consensus 56 ~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~----~ 131 (347)
..+.+.+|.+.|.+++|+| ..|++++.||+|++|++..++.. ........+.+|..+|.+++|+++ +
T Consensus 8 ~~~~~~~h~~~i~~~~~~~------~~l~s~~~dg~i~iw~~~~~~~~---~~~~~~~~~~~h~~~v~~~~~~~~~~~~g 78 (397)
T 1sq9_A 8 TANAGKAHDADIFSVSACN------SFTVSCSGDGYLKVWDNKLLDNE---NPKDKSYSHFVHKSGLHHVDVLQAIERDA 78 (397)
T ss_dssp EEEESSCSSSCEEEEEECS------SEEEEEETTSEEEEEESBCCTTC---CGGGGEEEEECCTTCEEEEEEEEEEETTT
T ss_pred hhhhhhhhhcCeEEEEecC------CeEEEEcCCCEEEEEECCCcccc---cCCCcceEEecCCCcEEEEEEecccccCC
Confidence 4567889999999999987 26999999999999999876421 112345677899999999999999 9
Q ss_pred ---CEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCC-----ccceEEEEeC-----CCC
Q 036314 132 ---NMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGH-----TQCVSSVVWP-----QQE 198 (347)
Q Consensus 132 ---~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h-----~~~v~~~~~~-----~~~ 198 (347)
++|++++.|++|++|++.+..... ...+..+..| ...|.++.|. +++
T Consensus 79 ~~~~~l~s~~~dg~i~iw~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 138 (397)
T 1sq9_A 79 FELCLVATTSFSGDLLFYRITREDETK--------------------KVIFEKLDLLDSDMKKHSFWALKWGASNDRLLS 138 (397)
T ss_dssp EEEEEEEEEETTSCEEEEEEEECTTTC--------------------CEEEEEECCSCTTGGGSCEEEEEEECCC----C
T ss_pred ccccEEEEEcCCCCEEEEEccCCcccc--------------------cccceeecccccccCCCcEEEEEEeeccCCCCc
Confidence 999999999999999987542100 0013455666 5889999875 577
Q ss_pred e-EEEEecCCcEEEEECCC------Cceee-----eeee--------CeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCC
Q 036314 199 T-IYSASWDHSVRTWDVEM------GKDLS-----DIFC--------GKALNCIDIGGEGSALIAAGGSDPILRIWDPRK 258 (347)
Q Consensus 199 ~-l~s~s~dg~v~vwd~~~------~~~~~-----~~~~--------~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~ 258 (347)
. |++++.||.|++||++. +..+. .+.. ...+.++++++++ ++++++.|+.|++||++.
T Consensus 139 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i~d~~~ 216 (397)
T 1sq9_A 139 HRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQISELST 216 (397)
T ss_dssp EEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEEETTT
T ss_pred eEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCcEEEEECCC
Confidence 8 99999999999999988 65554 4432 4568899997765 889999999999999975
Q ss_pred CCCCCCeEEecC---C---CCCeeEEEeCCCCCeEEEEEeCC---CcEEEEEcCCCccceeecC-------------CCC
Q 036314 259 PGTSAPVFQFSS---H---NSWISACKWHNKSWFHLISASYD---GKVMLWDLRTAWPLSVIDS-------------HKD 316 (347)
Q Consensus 259 ~~~~~~~~~~~~---h---~~~v~~v~~s~~~~~~l~s~s~D---~~i~lwd~~~~~~~~~~~~-------------h~~ 316 (347)
. .++..+.. | ...|.+++|+|++. +|++++.| +.|++||+++++.+..+.+ |.+
T Consensus 217 ~---~~~~~~~~~~~h~~~~~~i~~i~~~~~~~-~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (397)
T 1sq9_A 217 L---RPLYNFESQHSMINNSNSIRSVKFSPQGS-LLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSS 292 (397)
T ss_dssp T---EEEEEEECCC---CCCCCEEEEEECSSTT-EEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSS
T ss_pred C---ceeEEEeccccccccCCccceEEECCCCC-EEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCC
Confidence 2 34677777 8 99999999999986 59999999 9999999999998899988 999
Q ss_pred eEEEEeecC-CCEEEEccCCceEEEeecc
Q 036314 317 KVLCADWWR-GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 317 ~v~~~~~~~-~~~l~s~s~D~~v~vw~~~ 344 (347)
.|.++.|+| +++|++++.|++|+||+..
T Consensus 293 ~v~~~~~~~~~~~l~~~~~dg~i~iwd~~ 321 (397)
T 1sq9_A 293 WVMSLSFNDSGETLCSAGWDGKLRFWDVK 321 (397)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETT
T ss_pred cEEEEEECCCCCEEEEEeCCCeEEEEEcC
Confidence 999999985 7789999999999999864
No 98
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=9.4e-33 Score=250.02 Aligned_cols=253 Identities=13% Similarity=0.138 Sum_probs=197.9
Q ss_pred eEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeC-CCCE
Q 036314 55 VCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAET-SGNM 133 (347)
Q Consensus 55 ~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~-~~~~ 133 (347)
...+.+.+|.+.|.+++|+|++. ..|++|+.||+|++||+.+++.. ....+.+|...|.+++|+| ++++
T Consensus 64 ~~~~~~~~h~~~v~~~~~~~~~~---~~l~s~~~dg~i~iwd~~~~~~~-------~~~~~~~h~~~v~~~~~~~~~~~~ 133 (383)
T 3ei3_B 64 KLHRTASPFDRRVTSLEWHPTHP---TTVAVGSKGGDIILWDYDVQNKT-------SFIQGMGPGDAITGMKFNQFNTNQ 133 (383)
T ss_dssp EEEEEECCCSSCEEEEEECSSCT---TEEEEEEBTSCEEEEETTSTTCE-------EEECCCSTTCBEEEEEEETTEEEE
T ss_pred ceEEeccCCCCCEEEEEECCCCC---CEEEEEcCCCeEEEEeCCCcccc-------eeeecCCcCCceeEEEeCCCCCCE
Confidence 45678899999999999999642 37999999999999999865421 2222347999999999999 6799
Q ss_pred EEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEE
Q 036314 134 VCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTW 212 (347)
Q Consensus 134 l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vw 212 (347)
|++++.|++|++||+..... ..+....+|...|.+++| ++++.|++++.|+.|++|
T Consensus 134 l~s~~~d~~i~iwd~~~~~~-----------------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~ 190 (383)
T 3ei3_B 134 LFVSSIRGATTLRDFSGSVI-----------------------QVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLL 190 (383)
T ss_dssp EEEEETTTEEEEEETTSCEE-----------------------EEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEE
T ss_pred EEEEeCCCEEEEEECCCCce-----------------------EEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEE
Confidence 99999999999999874210 011122345578999998 678899999999999999
Q ss_pred ECCCCceeeeeee-CeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCC-CeEEecCCCCCeeEEEeCC-CCCeEEE
Q 036314 213 DVEMGKDLSDIFC-GKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSA-PVFQFSSHNSWISACKWHN-KSWFHLI 289 (347)
Q Consensus 213 d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~-~~~~~~~h~~~v~~v~~s~-~~~~~l~ 289 (347)
|++ ++.+..+.. ...+.++++++++..++++++.|+.|++||++...... ....+ +|...|.+++|+| ++. +|+
T Consensus 191 d~~-~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~-~l~ 267 (383)
T 3ei3_B 191 GLD-GHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDST-KLL 267 (383)
T ss_dssp ETT-SCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSC-EEE
T ss_pred ECC-CCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCC-EEE
Confidence 994 556666653 45789999988766589999999999999998533222 23344 7999999999999 775 699
Q ss_pred EEeCCCcEEEEEcCCCccceeecCCC-----------------CeEEEEeecCCCEEEEccCCceEEEeecc
Q 036314 290 SASYDGKVMLWDLRTAWPLSVIDSHK-----------------DKVLCADWWRGDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 290 s~s~D~~i~lwd~~~~~~~~~~~~h~-----------------~~v~~~~~~~~~~l~s~s~D~~v~vw~~~ 344 (347)
+++.|+.|++||+++++.+..+.+|. +.+..+.|+++..+ +++.|++|+||+..
T Consensus 268 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~-s~s~d~~i~iwd~~ 338 (383)
T 3ei3_B 268 TTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL-LLNDKRTIDIYDAN 338 (383)
T ss_dssp EEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT-CTTCCCCEEEEETT
T ss_pred EEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc-ccCCCCeEEEEecC
Confidence 99999999999999988777776553 34555777654444 88999999999964
No 99
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.3e-32 Score=247.33 Aligned_cols=250 Identities=16% Similarity=0.186 Sum_probs=202.4
Q ss_pred EeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEee
Q 036314 59 ILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGS 138 (347)
Q Consensus 59 ~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs 138 (347)
.+..|.+.|.+++|+|++ ..|++++.|++|++||+..++ .+....+.+|..+|.+++|+|++++|++++
T Consensus 3 ~~~~~~~~i~~~~~s~~~----~~l~~~~~d~~v~i~~~~~~~-------~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 71 (372)
T 1k8k_C 3 YHSFLVEPISCHAWNKDR----TQIAICPNNHEVHIYEKSGNK-------WVQVHELKEHNGQVTGVDWAPDSNRIVTCG 71 (372)
T ss_dssp EEESCSSCCCEEEECTTS----SEEEEECSSSEEEEEEEETTE-------EEEEEEEECCSSCEEEEEEETTTTEEEEEE
T ss_pred eecccCCCeEEEEECCCC----CEEEEEeCCCEEEEEeCCCCc-------EEeeeeecCCCCcccEEEEeCCCCEEEEEc
Confidence 355699999999999854 379999999999999987653 124567889999999999999999999999
Q ss_pred CCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCC
Q 036314 139 WDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMG 217 (347)
Q Consensus 139 ~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~ 217 (347)
.|++|++||+.+... .....+..|...|.++.| +++++|++++.|+.|++||++.+
T Consensus 72 ~dg~i~vwd~~~~~~-----------------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~ 128 (372)
T 1k8k_C 72 TDRNAYVWTLKGRTW-----------------------KPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQE 128 (372)
T ss_dssp TTSCEEEEEEETTEE-----------------------EEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETT
T ss_pred CCCeEEEEECCCCee-----------------------eeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCC
Confidence 999999999865311 112234568889999998 57789999999999999999877
Q ss_pred ce---eeeee--eCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCC---------------CCCCCeEEecCCCCCeeE
Q 036314 218 KD---LSDIF--CGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKP---------------GTSAPVFQFSSHNSWISA 277 (347)
Q Consensus 218 ~~---~~~~~--~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~---------------~~~~~~~~~~~h~~~v~~ 277 (347)
.. ...+. +...+.+++++++ +.++++++.|+.|++||++.. ........+.+|...|.+
T Consensus 129 ~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 207 (372)
T 1k8k_C 129 NDWWVCKHIKKPIRSTVLSLDWHPN-SVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHG 207 (372)
T ss_dssp TTEEEEEEECTTCCSCEEEEEECTT-SSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEE
T ss_pred CcceeeeeeecccCCCeeEEEEcCC-CCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEE
Confidence 63 22222 2456889999765 568899999999999997521 112346677899999999
Q ss_pred EEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeecCCC-EEEEccCCceEEEeeccc
Q 036314 278 CKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGD-SVISGGVDSKLCVSSGVS 345 (347)
Q Consensus 278 v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~D~~v~vw~~~~ 345 (347)
++|+|++. +|++++.|+.|++||+++++.+..+..|...|.+++|+++. +|+++ .|+.|++|+...
T Consensus 208 ~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 208 VCFSANGS-RVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp EEECSSSS-EEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred EEECCCCC-EEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccC
Confidence 99999986 69999999999999999999999999999999999998654 55555 999999998643
No 100
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=4.3e-33 Score=248.97 Aligned_cols=251 Identities=13% Similarity=0.177 Sum_probs=197.1
Q ss_pred CcCCceeeccCCC----CCEEEEEecCCeEEEEcCC-Ce-EEEEeeccCCceEEEEEeec--CCCceEEEEEccCCCcEE
Q 036314 22 LHDDWVSAVDGSN----PGFILTGCYDNLGRVWKAG-GV-CTHILEGHCGAVSSVNIIKS--DGLKYVTVATASKDQTLR 93 (347)
Q Consensus 22 ~h~~~v~~~~~~~----~~~l~sg~~d~~i~iw~~~-~~-~~~~l~~h~~~V~~v~~~~~--~~~~~~~l~s~s~Dg~v~ 93 (347)
+|...|.++++++ +.+|++|+.|++|++||.. +. ....+.+|...|.++.|.+. -..++..|++++.|++|+
T Consensus 63 ~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~ 142 (357)
T 3i2n_A 63 EKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVK 142 (357)
T ss_dssp EESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEE
T ss_pred cccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEE
Confidence 7999999999985 3799999999999999975 44 67789999999999977541 111334799999999999
Q ss_pred EEeccccccccCccccceeeeeecccc----ceEEEE----EeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccC
Q 036314 94 LWKFDAEELVNHPKKIRSFKILRGHKA----SVHSIA----AETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKG 165 (347)
Q Consensus 94 ~wd~~~~~~~~~~~~~~~~~~~~~h~~----~V~~v~----~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~ 165 (347)
+||+..++. +...+..|.. .|.+++ |+++++++++++.|+.|++||+.+..
T Consensus 143 vwd~~~~~~--------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~------------- 201 (357)
T 3i2n_A 143 VWDPRQKDD--------PVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMA------------- 201 (357)
T ss_dssp EECTTSCSS--------CSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTE-------------
T ss_pred EEeCCCCCC--------cceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCc-------------
Confidence 999976531 2334444443 788988 78899999999999999999987532
Q ss_pred CCccccccccccccccccCCccceEEEEeC----CCCeEEEEecCCcEEEEECCCCceeeeee------eCeeeEEEEee
Q 036314 166 NNQVEEPQLEGEAISTLVGHTQCVSSVVWP----QQETIYSASWDHSVRTWDVEMGKDLSDIF------CGKALNCIDIG 235 (347)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~----~~~~l~s~s~dg~v~vwd~~~~~~~~~~~------~~~~~~~~~~~ 235 (347)
......|...|.++.|. +++.|++++.||.|++||+++++....+. +...+.+++++
T Consensus 202 -------------~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 268 (357)
T 3i2n_A 202 -------------LRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHL 268 (357)
T ss_dssp -------------EEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEE
T ss_pred -------------eeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEEC
Confidence 11234577889999984 67899999999999999998776554442 34578899998
Q ss_pred CCCCcEEEEecCCCcEEEEeCCCCCCC----------------CCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEE
Q 036314 236 GEGSALIAAGGSDPILRIWDPRKPGTS----------------APVFQFSSHNSWISACKWHNKSWFHLISASYDGKVML 299 (347)
Q Consensus 236 ~~~~~~la~~~~d~~i~iwd~~~~~~~----------------~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~l 299 (347)
|++..++++++.|+.|++||++..... ..+..+.+|...|.+++|+|++..++++++.|+.|++
T Consensus 269 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~i 348 (357)
T 3i2n_A 269 PQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRV 348 (357)
T ss_dssp TTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEE
T ss_pred CCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEE
Confidence 876558999999999999998753322 2466788999999999999999764448999999999
Q ss_pred EEcCCCc
Q 036314 300 WDLRTAW 306 (347)
Q Consensus 300 wd~~~~~ 306 (347)
||+.+.+
T Consensus 349 w~~~~~~ 355 (357)
T 3i2n_A 349 LIVTKLN 355 (357)
T ss_dssp EEECC--
T ss_pred EECCCcc
Confidence 9998754
No 101
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1.9e-32 Score=249.00 Aligned_cols=297 Identities=15% Similarity=0.213 Sum_probs=194.4
Q ss_pred CCcCCceeeccCCC-C-CEEEEEecCCeEEEEcCC-CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEec
Q 036314 21 SLHDDWVSAVDGSN-P-GFILTGCYDNLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKF 97 (347)
Q Consensus 21 ~~h~~~v~~~~~~~-~-~~l~sg~~d~~i~iw~~~-~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~ 97 (347)
.+|...|.++++++ + .+|++++.|+.|++||.. +.....+. +...+.++.+.+... +...+++++.|+.|++||+
T Consensus 96 ~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~d~ 173 (408)
T 4a11_B 96 DVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVST-KHCLVAVGTRGPKVQLCDL 173 (408)
T ss_dssp TCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCS-SCCEEEEEESSSSEEEEES
T ss_pred ccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCC-CCcEEEEEcCCCeEEEEeC
Confidence 46999999999874 4 599999999999999986 45555554 778899999988543 3457999999999999999
Q ss_pred cccccccCccccceeeeeeccccceEEEEEeCCCC-EEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccc
Q 036314 98 DAEELVNHPKKIRSFKILRGHKASVHSIAAETSGN-MVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEG 176 (347)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~-~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (347)
..++ ....+.+|..+|.+++|+|+++ ++++++.|+.|++||+.......... .. .......
T Consensus 174 ~~~~---------~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~---~~------~~~~~~~ 235 (408)
T 4a11_B 174 KSGS---------CSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITL---DQ------HNGKKSQ 235 (408)
T ss_dssp SSSC---------CCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEEC---CT------TTTCSCC
T ss_pred CCcc---------eeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccc---cc------cccccce
Confidence 7654 3456788999999999999998 58999999999999997643111000 00 0000011
Q ss_pred cccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeeeeC------eeeEEEEeeCCCCcEEEEecCCC
Q 036314 177 EAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCG------KALNCIDIGGEGSALIAAGGSDP 249 (347)
Q Consensus 177 ~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~------~~~~~~~~~~~~~~~la~~~~d~ 249 (347)
.......+|...|.+++| |++++|++++.|+.|++||+++++........ ..... .........+++++.|+
T Consensus 236 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 314 (408)
T 4a11_B 236 AVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKF-TVSCGCSSEFVFVPYGS 314 (408)
T ss_dssp CTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCC-EECCSSSSCEEEEEETT
T ss_pred eeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceecccccccccccccee-EEecCCCceEEEEecCC
Confidence 123345678899999998 57788999999999999999987755433211 11111 11122233456667899
Q ss_pred cEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeec--CCC
Q 036314 250 ILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWW--RGD 327 (347)
Q Consensus 250 ~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~--~~~ 327 (347)
.|++||+... ..+..+.+|...|.+++|+|++. +|++++.||.|++||+++++++.....+... ..+. ...
T Consensus 315 ~i~v~d~~~~---~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~---~~~~~~~~~ 387 (408)
T 4a11_B 315 TIAVYTVYSG---EQITMLKGHYKTVDCCVFQSNFQ-ELYSGSRDCNILAWVPSLYEPVPDDDETTTK---SQLNPAFED 387 (408)
T ss_dssp EEEEEETTTC---CEEEEECCCSSCEEEEEEETTTT-EEEEEETTSCEEEEEECC-------------------------
T ss_pred EEEEEECcCC---cceeeeccCCCeEEEEEEcCCCC-EEEEECCCCeEEEEeCCCCCccCCCCceEec---cccccccce
Confidence 9999998753 35778899999999999999986 5999999999999999998776654433211 2232 234
Q ss_pred EEEEccCCceEEEeeccc
Q 036314 328 SVISGGVDSKLCVSSGVS 345 (347)
Q Consensus 328 ~l~s~s~D~~v~vw~~~~ 345 (347)
.+.+++.|+.+++|+-++
T Consensus 388 ~~~~~~~~~~~~~W~~~~ 405 (408)
T 4a11_B 388 AWSSSDEEGGTSAWSHPQ 405 (408)
T ss_dssp ------------------
T ss_pred eecccCccCceeecCCcc
Confidence 567788899999998775
No 102
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.2e-32 Score=244.80 Aligned_cols=246 Identities=13% Similarity=0.101 Sum_probs=202.1
Q ss_pred EEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCC-EEEE
Q 036314 58 HILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGN-MVCS 136 (347)
Q Consensus 58 ~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~-~l~s 136 (347)
....+|.+.|.+++|+|++ ..|++++.|++|++|++..++. ......+.+|..+|.+++|+|+++ +|++
T Consensus 5 ~~~~~h~~~v~~~~~s~~~----~~l~~~~~d~~v~iw~~~~~~~------~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 74 (342)
T 1yfq_A 5 QIEQAPKDYISDIKIIPSK----SLLLITSWDGSLTVYKFDIQAK------NVDLLQSLRYKHPLLCCNFIDNTDLQIYV 74 (342)
T ss_dssp ECSSCCSSCEEEEEEEGGG----TEEEEEETTSEEEEEEEETTTT------EEEEEEEEECSSCEEEEEEEESSSEEEEE
T ss_pred ecccCCCCcEEEEEEcCCC----CEEEEEcCCCeEEEEEeCCCCc------cccceeeeecCCceEEEEECCCCCcEEEE
Confidence 3456899999999999954 3689999999999999976531 112345568999999999999999 9999
Q ss_pred eeCCCcEEEEec-CCCCCCCccceeeeccCCCccccccccccccccccC--CccceEEEEeCCCCeEEEEecCCcEEEEE
Q 036314 137 GSWDCTISLWRT-NDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVG--HTQCVSSVVWPQQETIYSASWDHSVRTWD 213 (347)
Q Consensus 137 gs~Dg~I~iwd~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~l~s~s~dg~v~vwd 213 (347)
|+.|+.|++||+ .... ...+.+ |...|.++.|.++..|++++.|+.|++||
T Consensus 75 ~~~dg~i~~wd~~~~~~--------------------------~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~iwd 128 (342)
T 1yfq_A 75 GTVQGEILKVDLIGSPS--------------------------FQALTNNEANLGICRICKYGDDKLIAASWDGLIEVID 128 (342)
T ss_dssp EETTSCEEEECSSSSSS--------------------------EEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEEC
T ss_pred EcCCCeEEEEEeccCCc--------------------------eEeccccCCCCceEEEEeCCCCEEEEEcCCCeEEEEc
Confidence 999999999998 6531 235566 89999999984488999999999999999
Q ss_pred CCC---------CceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCC-CCCCCCeEEecCCCCCeeEEEeCC-
Q 036314 214 VEM---------GKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRK-PGTSAPVFQFSSHNSWISACKWHN- 282 (347)
Q Consensus 214 ~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~-~~~~~~~~~~~~h~~~v~~v~~s~- 282 (347)
+++ ++.+..+.....+.++++.++. +++++.|+.|++||++. ... ........|...+.+++|+|
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---l~~~~~d~~i~i~d~~~~~~~-~~~~~~~~~~~~i~~i~~~~~ 204 (342)
T 1yfq_A 129 PRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR---LIVGMNNSQVQWFRLPLCEDD-NGTIEESGLKYQIRDVALLPK 204 (342)
T ss_dssp HHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE---EEEEESTTEEEEEESSCCTTC-CCEEEECSCSSCEEEEEECSG
T ss_pred ccccccccccccCCeeeEEeeCCceEEEEecCCc---EEEEeCCCeEEEEECCccccc-cceeeecCCCCceeEEEECCC
Confidence 987 6666666556678899997543 78889999999999986 322 23345567888999999999
Q ss_pred CCCeEEEEEeCCCcEEEEEcCCC------ccceeecCCCC---------eEEEEeecC-CCEEEEccCCceEEEeecc
Q 036314 283 KSWFHLISASYDGKVMLWDLRTA------WPLSVIDSHKD---------KVLCADWWR-GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 283 ~~~~~l~s~s~D~~i~lwd~~~~------~~~~~~~~h~~---------~v~~~~~~~-~~~l~s~s~D~~v~vw~~~ 344 (347)
++. +|++++.||.|++||++.. +....+.+|.. .|.+++|+| +++|++++.||+|++|+..
T Consensus 205 ~~~-~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~ 281 (342)
T 1yfq_A 205 EQE-GYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQ 281 (342)
T ss_dssp GGC-EEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETT
T ss_pred CCC-EEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCc
Confidence 875 6999999999999999886 67778888865 999999986 7789999999999999865
No 103
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.9e-33 Score=247.51 Aligned_cols=268 Identities=8% Similarity=-0.022 Sum_probs=192.4
Q ss_pred CCCEEEEEecCCeEEEEcCC-CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCcccccee
Q 036314 34 NPGFILTGCYDNLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSF 112 (347)
Q Consensus 34 ~~~~l~sg~~d~~i~iw~~~-~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~ 112 (347)
++.+|+|||.||+|++||.. +..+..+. ...|.++.++|. +++++.|++|++|+.............+.+
T Consensus 47 d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~-------~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~ 117 (343)
T 3lrv_A 47 DKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA-------IISRGPCNRLLLLYPGNQITILDSKTNKVL 117 (343)
T ss_dssp EEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS-------EEEECSTTEEEEEETTTEEEEEETTTCCEE
T ss_pred CCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc-------eEEecCCCeEEEEEccCceEEeecCCccee
Confidence 56799999999999999974 55555555 456777878772 899999999999987643211111112223
Q ss_pred eee-eccccceEEEEEeC--CCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccc-cCCccc
Q 036314 113 KIL-RGHKASVHSIAAET--SGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTL-VGHTQC 188 (347)
Q Consensus 113 ~~~-~~h~~~V~~v~~s~--~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~ 188 (347)
..+ .+|..+|.+++|+| +++++++++.|++|++||+++... .... ..|...
T Consensus 118 ~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~-------------------------~~~~~~~~~~~ 172 (343)
T 3lrv_A 118 REIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQ-------------------------YIVHSAKSDVE 172 (343)
T ss_dssp EEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCE-------------------------EEEECCCSSCC
T ss_pred EEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcE-------------------------EEEEecCCCCc
Confidence 333 36778999999999 999999999999999999876421 1122 234456
Q ss_pred eEEEEe-CCCCeEEEEecCCcEEEEECCCCcee-eeeee--CeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCC
Q 036314 189 VSSVVW-PQQETIYSASWDHSVRTWDVEMGKDL-SDIFC--GKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAP 264 (347)
Q Consensus 189 v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~ 264 (347)
+.+++| |++.+|++|+.||.|++||+++++.+ ..+.. ..++.+++|+|+ +.++++++ |+.|++||++.......
T Consensus 173 i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~-g~~l~s~~-~~~v~iwd~~~~~~~~~ 250 (343)
T 3lrv_A 173 YSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADN-GYWMVVEC-DQTVVCFDLRKDVGTLA 250 (343)
T ss_dssp CCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTT-SSEEEEEE-SSBEEEEETTSSTTCBS
T ss_pred eEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCC-CCEEEEEe-CCeEEEEEcCCCCccee
Confidence 888888 57888999999999999999998876 55554 467999999765 46778888 55999999986543222
Q ss_pred eEEecCCCCCee--EEEeCCCCCeEEEEEeC-CCcEEEEEcCCCccceeecCCCCeEEEEeec----CCCEEEEccCCce
Q 036314 265 VFQFSSHNSWIS--ACKWHNKSWFHLISASY-DGKVMLWDLRTAWPLSVIDSHKDKVLCADWW----RGDSVISGGVDSK 337 (347)
Q Consensus 265 ~~~~~~h~~~v~--~v~~s~~~~~~l~s~s~-D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~----~~~~l~s~s~D~~ 337 (347)
+..+..|...+. +++|+|++. +|++++. |+.|+||++++....-.. ..+..+.|. +...|++++.|+.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~g~-~l~~~s~~d~~i~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~d~~ 325 (343)
T 3lrv_A 251 YPTYTIPEFKTGTVTYDIDDSGK-NMIAYSNESNSLTIYKFDKKTKNWTK----DEESALCLQSDTADFTDMDVVCGDGG 325 (343)
T ss_dssp SCCCBC-----CCEEEEECTTSS-EEEEEETTTTEEEEEEECTTTCSEEE----EEEEECCC----CCCCEEEEEEETTE
T ss_pred ecccccccccccceEEEECCCCC-EEEEecCCCCcEEEEEEcccccceEe----cCceeEecCccccccceeEEEecCCc
Confidence 333333444444 699999986 5888887 999999999765433222 567778886 3557888899998
Q ss_pred EEEee
Q 036314 338 LCVSS 342 (347)
Q Consensus 338 v~vw~ 342 (347)
+.++-
T Consensus 326 ~~~~~ 330 (343)
T 3lrv_A 326 IAAIL 330 (343)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 88764
No 104
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-33 Score=275.81 Aligned_cols=254 Identities=20% Similarity=0.340 Sum_probs=201.8
Q ss_pred EEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCC--CCEE
Q 036314 57 THILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETS--GNMV 134 (347)
Q Consensus 57 ~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~--~~~l 134 (347)
..++.+|.+.|.+++|+|++. .|++|+.||+|++||+..++ .+....+.+|.++|.+++|+++ +++|
T Consensus 2 ~~~l~gH~~~V~~l~~s~dg~----~latg~~dg~I~vwd~~~~~-------~~~~~~l~~h~~~V~~l~~s~~~~~~~l 70 (753)
T 3jro_A 2 VVIANAHNELIHDAVLDYYGK----RLATCSSDKTIKIFEVEGET-------HKLIDTLTGHEGPVWRVDWAHPKFGTIL 70 (753)
T ss_dssp ------CCCCEEEECCCSSSC----CEEEEETTTEEEEEEEETTE-------EEEEEEECCCSSCEEEEEECCTTSCSEE
T ss_pred eeecccCcceeEEEEECCCCC----eEEEEECCCcEEEEecCCCC-------CccceeccCCcCceEEEEecCCCCCCEE
Confidence 356889999999999998543 69999999999999987432 2355678899999999999988 9999
Q ss_pred EEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeC-C--CCeEEEEecCCcEEE
Q 036314 135 CSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP-Q--QETIYSASWDHSVRT 211 (347)
Q Consensus 135 ~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~--~~~l~s~s~dg~v~v 211 (347)
++|+.||+|++||+.++. ......+.+|...|.++.|. + +..+++++.||+|++
T Consensus 71 ~s~s~Dg~I~vwd~~~~~-----------------------~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~v 127 (753)
T 3jro_A 71 ASCSYDGKVLIWKEENGR-----------------------WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSV 127 (753)
T ss_dssp EEEETTSCEEEEEEETTE-----------------------EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEE
T ss_pred EEEeCCCeEEEEECCCCc-----------------------ccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEE
Confidence 999999999999986531 11345667899999999984 5 788999999999999
Q ss_pred EECCCCceeee--ee-eCeeeEEEEeeCC------------CCcEEEEecCCCcEEEEeCCCCCCC-CCeEEecCCCCCe
Q 036314 212 WDVEMGKDLSD--IF-CGKALNCIDIGGE------------GSALIAAGGSDPILRIWDPRKPGTS-APVFQFSSHNSWI 275 (347)
Q Consensus 212 wd~~~~~~~~~--~~-~~~~~~~~~~~~~------------~~~~la~~~~d~~i~iwd~~~~~~~-~~~~~~~~h~~~v 275 (347)
||++.+..... +. +...+.++.++|. ++..+++|+.||.|++||++..... .....+.+|...|
T Consensus 128 wdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V 207 (753)
T 3jro_A 128 VEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWV 207 (753)
T ss_dssp EECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCE
T ss_pred EEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcE
Confidence 99987743322 22 3457889999774 4568899999999999998754221 2356778999999
Q ss_pred eEEEeCCCC--CeEEEEEeCCCcEEEEEcCCCc-----cceeecCCCCeEEEEeecC-CCEEEEccCCceEEEeecc
Q 036314 276 SACKWHNKS--WFHLISASYDGKVMLWDLRTAW-----PLSVIDSHKDKVLCADWWR-GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 276 ~~v~~s~~~--~~~l~s~s~D~~i~lwd~~~~~-----~~~~~~~h~~~v~~~~~~~-~~~l~s~s~D~~v~vw~~~ 344 (347)
.+++|+|++ +.+|++++.||+|++||++++. .......|.+.|++++|+| |++|++++.||.|+||+..
T Consensus 208 ~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~ 284 (753)
T 3jro_A 208 RDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (753)
T ss_dssp EEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCC
T ss_pred EEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecC
Confidence 999999993 4679999999999999999864 2334456889999999985 7789999999999999864
No 105
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-31 Score=248.41 Aligned_cols=279 Identities=10% Similarity=0.068 Sum_probs=210.4
Q ss_pred CCceeeccCCC-CCEEEEEecCCeEEEEcC-CCe---EEEEeec------------------------------------
Q 036314 24 DDWVSAVDGSN-PGFILTGCYDNLGRVWKA-GGV---CTHILEG------------------------------------ 62 (347)
Q Consensus 24 ~~~v~~~~~~~-~~~l~sg~~d~~i~iw~~-~~~---~~~~l~~------------------------------------ 62 (347)
..++.+++++. +.+|++ +.++.|++||. .|. .+..+..
T Consensus 4 ~~p~~~v~~s~dg~~l~~-~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 4 IHPLQNLLTSRDGSLVFA-IIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp ECCCCEEEECSSSSEEEE-EETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred cccEEEEEecCCCCEEEE-EeCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 45678888884 555554 46889999995 455 4444443
Q ss_pred ------------------cCCceEEEEEeecCCCceEEEEEccCCCcEEEEecc--ccccccCccccceeeeee--cccc
Q 036314 63 ------------------HCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFD--AEELVNHPKKIRSFKILR--GHKA 120 (347)
Q Consensus 63 ------------------h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~--~~~~~~~~~~~~~~~~~~--~h~~ 120 (347)
|.+.|.+++|+|++. .++++++.||+|++||+. .++ .+..+. .|..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~---~l~~~~~~dg~v~iwd~~~~~~~---------~~~~~~~~~~~~ 150 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDES---RLIACADSDKSLLVFDVDKTSKN---------VLKLRKRFCFSK 150 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSS---EEEEEEGGGTEEEEEEECSSSSS---------CEEEEEEEECSS
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCC---EEEEEECCCCeEEEEECcCCCCc---------eeeeeecccCCC
Confidence 334799999999543 234899999999999997 543 233444 5778
Q ss_pred ceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CC---
Q 036314 121 SVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQ--- 196 (347)
Q Consensus 121 ~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~--- 196 (347)
.|.+++|+|++++|++|+.|+.|++|++.+..... .....+.+|...|.++.| |+
T Consensus 151 ~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~---------------------~~~~~~~~h~~~v~~~~~sp~~~~ 209 (450)
T 2vdu_B 151 RPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEK---------------------FTQEPILGHVSMLTDVHLIKDSDG 209 (450)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSS---------------------CCCCCSEECSSCEEEEEEEECTTS
T ss_pred CceEEEEcCCCCEEEEEeCCCcEEEEecCCccccc---------------------ccceeeecccCceEEEEEcCCCCC
Confidence 99999999999999999999999999987643210 023356789999999998 46
Q ss_pred CCeEEEEecCCcEEEEECCCCceeeeee--eCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEec-----
Q 036314 197 QETIYSASWDHSVRTWDVEMGKDLSDIF--CGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFS----- 269 (347)
Q Consensus 197 ~~~l~s~s~dg~v~vwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~----- 269 (347)
+++|++++.|++|++||++++..+..+. +...+.+++|+ ++.+|++++.|+.|++||++... .+..+.
T Consensus 210 ~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s--d~~~l~s~~~d~~v~vwd~~~~~---~~~~~~~~~~~ 284 (450)
T 2vdu_B 210 HQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG--KDYLLLSAGGDDKIFAWDWKTGK---NLSTFDYNSLI 284 (450)
T ss_dssp CEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC--STTEEEEEESSSEEEEEETTTCC---EEEEEECHHHH
T ss_pred CcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC--CCCEEEEEeCCCeEEEEECCCCc---Eeeeecchhhh
Confidence 6689999999999999999888776643 34578999997 56788999999999999997532 233333
Q ss_pred --------------------CCCCCeeEEEeCCCCCeEEEEEe-CCCcEEEEEc--CCC---ccceeecCCCCeEEEEee
Q 036314 270 --------------------SHNSWISACKWHNKSWFHLISAS-YDGKVMLWDL--RTA---WPLSVIDSHKDKVLCADW 323 (347)
Q Consensus 270 --------------------~h~~~v~~v~~s~~~~~~l~s~s-~D~~i~lwd~--~~~---~~~~~~~~h~~~v~~~~~ 323 (347)
.+...|.++.|+|++.+ |++++ .|+.|+|||+ ..+ +.+..+.+| +.|++++|
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~-l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~ 362 (450)
T 2vdu_B 285 KPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPF-VAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSA 362 (450)
T ss_dssp GGGCCTTSBC----------CBCCCEEEEEECSSSSE-EEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEE
T ss_pred hhhhhhcccccccccccccccceEEEEEEEEeCCCCE-EEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEe
Confidence 22346899999999875 67776 8999999999 555 556677888 88999999
Q ss_pred cCCCEEEEccC-------CceEEEeec
Q 036314 324 WRGDSVISGGV-------DSKLCVSSG 343 (347)
Q Consensus 324 ~~~~~l~s~s~-------D~~v~vw~~ 343 (347)
+|+..+++.+. +..|.||..
T Consensus 363 ~~~~~~v~~~~~~~~~~~~~~i~v~~~ 389 (450)
T 2vdu_B 363 HNDEFQVTLDNKESSGVQKNFAKFIEY 389 (450)
T ss_dssp ETTEEEEEECCTTCCSSCCCSEEEEEE
T ss_pred cCCcEEEEEecccCCCCCCcceEEEEE
Confidence 98766655433 556888864
No 106
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=2.8e-32 Score=269.86 Aligned_cols=247 Identities=17% Similarity=0.285 Sum_probs=209.1
Q ss_pred EEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEE
Q 036314 56 CTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVC 135 (347)
Q Consensus 56 ~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~ 135 (347)
..+.+.+|.+.|.+++|+|++ ..|++++.||+|++||+.+++ ....+.+|..+|.+++|+|++++|+
T Consensus 5 ~~~~~~~h~~~v~~i~~sp~~----~~la~~~~~g~v~iwd~~~~~---------~~~~~~~~~~~v~~~~~s~~~~~l~ 71 (814)
T 3mkq_A 5 IKKTFSNRSDRVKGIDFHPTE----PWVLTTLYSGRVEIWNYETQV---------EVRSIQVTETPVRAGKFIARKNWII 71 (814)
T ss_dssp CEEEEEEECSCEEEEEECSSS----SEEEEEETTSEEEEEETTTTE---------EEEEEECCSSCEEEEEEEGGGTEEE
T ss_pred cceeeecCCCceEEEEECCCC----CEEEEEeCCCEEEEEECCCCc---------eEEEEecCCCcEEEEEEeCCCCEEE
Confidence 356789999999999999954 379999999999999987654 4567789999999999999999999
Q ss_pred EeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEEC
Q 036314 136 SGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDV 214 (347)
Q Consensus 136 sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~ 214 (347)
+++.||+|++||+.++ ..+..+.+|...|.+++| |+++.|++++.||+|++||+
T Consensus 72 ~~~~dg~i~vw~~~~~-------------------------~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~ 126 (814)
T 3mkq_A 72 VGSDDFRIRVFNYNTG-------------------------EKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNW 126 (814)
T ss_dssp EEETTSEEEEEETTTC-------------------------CEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEG
T ss_pred EEeCCCeEEEEECCCC-------------------------cEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEEC
Confidence 9999999999998753 235567789999999999 57778999999999999999
Q ss_pred CCCc-eeeeee-eCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCC-CCCeeEEEeCC--CCCeEEE
Q 036314 215 EMGK-DLSDIF-CGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSH-NSWISACKWHN--KSWFHLI 289 (347)
Q Consensus 215 ~~~~-~~~~~~-~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h-~~~v~~v~~s~--~~~~~l~ 289 (347)
+++. ....+. +...+.+++|+|.++..+++++.|+.|++||++... ....+..| ...+.+++|+| ++. +|+
T Consensus 127 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~-~l~ 202 (814)
T 3mkq_A 127 ENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQST---PNFTLTTGQERGVNYVDYYPLPDKP-YMI 202 (814)
T ss_dssp GGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSS---CSEEEECCCTTCCCEEEECCSTTCC-EEE
T ss_pred CCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc---ceeEEecCCCCCEEEEEEEECCCCC-EEE
Confidence 8873 333333 345789999988566789999999999999987532 23444444 48899999999 775 699
Q ss_pred EEeCCCcEEEEEcCCCccceeecCCCCeEEEEeecC-CCEEEEccCCceEEEeecc
Q 036314 290 SASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 290 s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~D~~v~vw~~~ 344 (347)
+++.|+.|++||+++++.+..+.+|.+.|.++.|+| +.+|++++.||+|++|+..
T Consensus 203 ~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~ 258 (814)
T 3mkq_A 203 TASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSS 258 (814)
T ss_dssp EECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETT
T ss_pred EEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 999999999999999998999999999999999986 6689999999999999865
No 107
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=3.2e-32 Score=250.71 Aligned_cols=259 Identities=21% Similarity=0.271 Sum_probs=207.7
Q ss_pred CCCcCCceeeccCCC--CCEEEEEecCCeEEEEcCC-----------CeEEEEeeccCCceEEEEEeecCCCceEEEEEc
Q 036314 20 PSLHDDWVSAVDGSN--PGFILTGCYDNLGRVWKAG-----------GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATA 86 (347)
Q Consensus 20 ~~~h~~~v~~~~~~~--~~~l~sg~~d~~i~iw~~~-----------~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~ 86 (347)
..+|.+.|+++++++ +.+||+++.||.|++|+.. ......+.+|...|.+++|+|.+.. .|++|
T Consensus 124 ~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~---~l~s~ 200 (430)
T 2xyi_A 124 KINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNG---YLLSA 200 (430)
T ss_dssp EEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTT---EEEEE
T ss_pred EEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCC---eEEEE
Confidence 347999999999885 3599999999999999964 3456778999999999999985432 68999
Q ss_pred cCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeC-CCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccC
Q 036314 87 SKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAET-SGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKG 165 (347)
Q Consensus 87 s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~-~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~ 165 (347)
+.||+|++|++..+.... ........+.+|...|.+++|+| ++.+|++++.|+.|++||++....
T Consensus 201 ~~dg~i~vwd~~~~~~~~--~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~------------ 266 (430)
T 2xyi_A 201 SDDHTICLWDINATPKEH--RVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNT------------ 266 (430)
T ss_dssp CTTSCEEEEETTSCCBGG--GEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCS------------
T ss_pred eCCCeEEEEeCCCCCCCC--ceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCC------------
Confidence 999999999997632110 11122456778999999999999 678999999999999999975421
Q ss_pred CCccccccccccccccccCCccceEEEEeC-CCC-eEEEEecCCcEEEEECCCC-ceeeeee-eCeeeEEEEeeCCCCcE
Q 036314 166 NNQVEEPQLEGEAISTLVGHTQCVSSVVWP-QQE-TIYSASWDHSVRTWDVEMG-KDLSDIF-CGKALNCIDIGGEGSAL 241 (347)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~-~l~s~s~dg~v~vwd~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~ 241 (347)
...+..+..|...|.++.|. +++ .|++++.||+|++||++.. ..+..+. +...+.++.++|.+..+
T Consensus 267 ----------~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~ 336 (430)
T 2xyi_A 267 ----------SKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETI 336 (430)
T ss_dssp ----------SSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTE
T ss_pred ----------CcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCE
Confidence 12234556788999999995 455 5889999999999999874 4455554 34578999999888788
Q ss_pred EEEecCCCcEEEEeCCCCCC-----------CCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCC
Q 036314 242 IAAGGSDPILRIWDPRKPGT-----------SAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTA 305 (347)
Q Consensus 242 la~~~~d~~i~iwd~~~~~~-----------~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~ 305 (347)
+++++.|+.|++||++.... +..++.+.+|...|.+++|+|++..+|++++.|+.|+||+++..
T Consensus 337 l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 337 LASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp EEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred EEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 99999999999999875221 23467778999999999999999867999999999999999753
No 108
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=2.7e-32 Score=248.28 Aligned_cols=269 Identities=17% Similarity=0.143 Sum_probs=170.1
Q ss_pred CCcCCceeeccCC-CCCEEEEEecCCeEEEEcCC-CeE-----EEEeeccCCceEEEEEeecC----CCceEEEEEccCC
Q 036314 21 SLHDDWVSAVDGS-NPGFILTGCYDNLGRVWKAG-GVC-----THILEGHCGAVSSVNIIKSD----GLKYVTVATASKD 89 (347)
Q Consensus 21 ~~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~-~~~-----~~~l~~h~~~V~~v~~~~~~----~~~~~~l~s~s~D 89 (347)
..|...+....++ ++.+||+|+.|++|||||.. +.+ ...+.||++.|++++|+|.. ..++.+|||+|.|
T Consensus 86 ~~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D 165 (393)
T 4gq1_A 86 NLHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDD 165 (393)
T ss_dssp C----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETT
T ss_pred cccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECC
Confidence 3455545444455 34589999999999999964 332 23477999999999998721 2256789999999
Q ss_pred CcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCC-CEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCc
Q 036314 90 QTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSG-NMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQ 168 (347)
Q Consensus 90 g~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~-~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~ 168 (347)
++||+||+..+. +...+.+|..+|.+++|+|++ .+|++|+.|++|++||+..+.................
T Consensus 166 ~tv~~Wd~~~~~---------~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~ 236 (393)
T 4gq1_A 166 CTLIIWRLTDEG---------PILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWL 236 (393)
T ss_dssp SEEEEEEEETTE---------EEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCS
T ss_pred CeEEEEECCCCc---------eeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceE
Confidence 999999987543 344566889999999999987 4899999999999999987543211100000000000
Q ss_pred cccccccccccccccCCccceEEEEe--CCCCeEEEEecCCcEEEEECCCCceeeeeeeCe-------------------
Q 036314 169 VEEPQLEGEAISTLVGHTQCVSSVVW--PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGK------------------- 227 (347)
Q Consensus 169 ~~~~~~~~~~~~~~~~h~~~v~~~~~--~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~------------------- 227 (347)
...............+|...+.++.| ++++.|++++.|+++++||+..+.....+....
T Consensus 237 ~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 316 (393)
T 4gq1_A 237 LTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFP 316 (393)
T ss_dssp EEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSC
T ss_pred EecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccC
Confidence 00000000112234578888888887 578899999999999999998765443332110
Q ss_pred -eeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcC
Q 036314 228 -ALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLR 303 (347)
Q Consensus 228 -~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~ 303 (347)
.+.+..+.+.++.++++|+.|++|++||+..+. ....+.+|...|.+++|+|+|. +||+++.|| +.+|.+.
T Consensus 317 ~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~---~~~~~~~~~~~V~svafspdG~-~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 317 SLLGACPHPRYMDYFATAHSQHGLIQLINTYEKD---SNSIPIQLGMPIVDFCWHQDGS-HLAIATEGS-VLLTRLM 388 (393)
T ss_dssp CSSCCEECSSCTTEEEEEETTTTEEEEEETTCTT---CCEEEEECSSCEEEEEECTTSS-EEEEEESSE-EEEEEEG
T ss_pred cceeEEEccCCCCEEEEEECCCCEEEEEECCCCc---EEEEecCCCCcEEEEEEcCCCC-EEEEEeCCC-eEEEEEe
Confidence 111122223355567888999999999987532 3456678899999999999996 599998776 5566553
No 109
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.5e-32 Score=267.23 Aligned_cols=254 Identities=17% Similarity=0.208 Sum_probs=202.4
Q ss_pred CCCCcCCceeeccCC-CCCEEEEEecCCeEEEEcCC---CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEE
Q 036314 19 EPSLHDDWVSAVDGS-NPGFILTGCYDNLGRVWKAG---GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRL 94 (347)
Q Consensus 19 ~~~~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~---~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~ 94 (347)
...+|++.|++++++ ++.+|++|+.||+|++||.. +.+...+.+|.+.|.+++|+++. ++..|++|+.||+|++
T Consensus 4 ~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~--~~~~l~s~s~Dg~I~v 81 (753)
T 3jro_A 4 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPK--FGTILASCSYDGKVLI 81 (753)
T ss_dssp ----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTT--SCSEEEEEETTSCEEE
T ss_pred ecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCC--CCCEEEEEeCCCeEEE
Confidence 356899999999998 56799999999999999974 35677899999999999998752 1347999999999999
Q ss_pred EeccccccccCccccceeeeeeccccceEEEEEeCC--CCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccc
Q 036314 95 WKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETS--GNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEP 172 (347)
Q Consensus 95 wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~--~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (347)
||+.+++ ......+.+|..+|.+++|+|+ ++.+++|+.||+|++||+.....
T Consensus 82 wd~~~~~-------~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~------------------- 135 (753)
T 3jro_A 82 WKEENGR-------WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGT------------------- 135 (753)
T ss_dssp EEEETTE-------EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSC-------------------
T ss_pred EECCCCc-------ccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCC-------------------
Confidence 9997653 1245567889999999999999 99999999999999999876421
Q ss_pred cccccccccccCCccceEEEEeCC--------------CCeEEEEecCCcEEEEECCCCcee----eeee-eCeeeEEEE
Q 036314 173 QLEGEAISTLVGHTQCVSSVVWPQ--------------QETIYSASWDHSVRTWDVEMGKDL----SDIF-CGKALNCID 233 (347)
Q Consensus 173 ~~~~~~~~~~~~h~~~v~~~~~~~--------------~~~l~s~s~dg~v~vwd~~~~~~~----~~~~-~~~~~~~~~ 233 (347)
.....+.+|...|.++.|.+ +..+++++.||+|++||++++... ..+. +...+.+++
T Consensus 136 ----~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~ 211 (753)
T 3jro_A 136 ----TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVA 211 (753)
T ss_dssp ----CCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEE
T ss_pred ----cceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEE
Confidence 11224567888999999843 678999999999999999877432 2222 245789999
Q ss_pred eeCCC--CcEEEEecCCCcEEEEeCCCCCCC--CCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCC
Q 036314 234 IGGEG--SALIAAGGSDPILRIWDPRKPGTS--APVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTA 305 (347)
Q Consensus 234 ~~~~~--~~~la~~~~d~~i~iwd~~~~~~~--~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~ 305 (347)
++|++ +..+++++.|+.|++||++..... ........|...|.+++|+|++. +|++|+.||.|++||++.+
T Consensus 212 ~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~-~l~s~s~Dg~I~vwd~~~~ 286 (753)
T 3jro_A 212 WSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGN-VLALSGGDNKVTLWKENLE 286 (753)
T ss_dssp ECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTC-CEEEECSSSCEECCBCCSS
T ss_pred eccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCC-EEEEEcCCCEEEEEecCCC
Confidence 98764 678999999999999998754211 12334456888999999999986 5999999999999999853
No 110
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=4.7e-32 Score=249.97 Aligned_cols=276 Identities=16% Similarity=0.250 Sum_probs=196.1
Q ss_pred ccCCceEEEEEeecCCCceEEEEEccCCCcEEEEecccccccc--Cccccceeeeeeccc------------cceEEEEE
Q 036314 62 GHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVN--HPKKIRSFKILRGHK------------ASVHSIAA 127 (347)
Q Consensus 62 ~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~--~~~~~~~~~~~~~h~------------~~V~~v~~ 127 (347)
.|.+.|.+++|+|++ .+|++|+.||+|++|++..++... .....+....+.+|. .+|.+++|
T Consensus 26 ~~~~~V~~v~~s~~g----~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~ 101 (447)
T 3dw8_B 26 AEADIISTVEFNHSG----ELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRW 101 (447)
T ss_dssp CGGGSEEEEEECSSS----SEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEE
T ss_pred cccCcEEEEEECCCC----CEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEE
Confidence 367899999999954 379999999999999998654211 112233566788998 88999999
Q ss_pred eCCC--CEEEEeeCCCcEEEEecCCCCCCCccceeeec-------cCCCcccc-------cccccccccc-ccCCccceE
Q 036314 128 ETSG--NMVCSGSWDCTISLWRTNDSDAAGNQVSIKKR-------KGNNQVEE-------PQLEGEAIST-LVGHTQCVS 190 (347)
Q Consensus 128 s~~~--~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~-------~~~~~~~~-------~~~~~~~~~~-~~~h~~~v~ 190 (347)
+|++ ..|++++.|++|++|++............... ........ ........+. ..+|...|.
T Consensus 102 ~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 181 (447)
T 3dw8_B 102 LPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHIN 181 (447)
T ss_dssp CCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCC
T ss_pred cCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceE
Confidence 9998 79999999999999998653210000000000 00000000 0000111122 367999999
Q ss_pred EEEe-CCCCeEEEEecCCcEEEEECCCC-ceeeee--------eeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCC
Q 036314 191 SVVW-PQQETIYSASWDHSVRTWDVEMG-KDLSDI--------FCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPG 260 (347)
Q Consensus 191 ~~~~-~~~~~l~s~s~dg~v~vwd~~~~-~~~~~~--------~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~ 260 (347)
+++| ++++.|+++ .|++|++||++.. ..+..+ .+...+.+++++|++..+|++|+.|+.|++||++...
T Consensus 182 ~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~ 260 (447)
T 3dw8_B 182 SISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASA 260 (447)
T ss_dssp EEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCS
T ss_pred EEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCc
Confidence 9998 577788888 8999999999843 333321 1234689999988765799999999999999998643
Q ss_pred C-CCCeEEecCCCC------------CeeEEEeCCCCCeEEEEEeCCCcEEEEEcCC-CccceeecCCCCe---------
Q 036314 261 T-SAPVFQFSSHNS------------WISACKWHNKSWFHLISASYDGKVMLWDLRT-AWPLSVIDSHKDK--------- 317 (347)
Q Consensus 261 ~-~~~~~~~~~h~~------------~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~-~~~~~~~~~h~~~--------- 317 (347)
. ......+.+|.. .|.+++|+|++. +|++++. +.|++||++. ++++..+.+|...
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~ 338 (447)
T 3dw8_B 261 LCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGR-YMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYE 338 (447)
T ss_dssp SSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSS-EEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHH
T ss_pred cccceeeEeccCCCccccccccccCceEEEEEECCCCC-EEEEeeC-CeEEEEeCCCCccccceeecccccccccccccc
Confidence 1 112567778876 899999999986 5888888 9999999997 8888889888642
Q ss_pred ------EEEEeecC-CCEEEEccCCceEEEeecc
Q 036314 318 ------VLCADWWR-GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 318 ------v~~~~~~~-~~~l~s~s~D~~v~vw~~~ 344 (347)
+..++|+| +++|++|+.|++|+||+..
T Consensus 339 ~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~ 372 (447)
T 3dw8_B 339 NDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRN 372 (447)
T ss_dssp TSGGGCCCCEEECTTSSEEEEECSTTEEEEEETT
T ss_pred ccccccceEEEECCCCCEEEEeccCCEEEEEEcC
Confidence 23489975 6789999999999999865
No 111
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.3e-31 Score=236.70 Aligned_cols=256 Identities=15% Similarity=0.172 Sum_probs=208.6
Q ss_pred CCCcCCceeeccCC-CCCEEEEEecCCeEEEEcCC-CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCC-----CcE
Q 036314 20 PSLHDDWVSAVDGS-NPGFILTGCYDNLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKD-----QTL 92 (347)
Q Consensus 20 ~~~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~-~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~D-----g~v 92 (347)
..+|...|++++++ ++.+|++++.|++|++||.. +.++..+. |...|.++.|+|++ ..|++++.+ +.|
T Consensus 70 ~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~----~~l~~~~~~~~~~~g~i 144 (369)
T 3zwl_B 70 LDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCG----NYFLAILDNVMKNPGSI 144 (369)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTS----SEEEEEECCBTTBCCEE
T ss_pred hhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee-cCCCeEEEEEccCC----CEEEEecCCccCCCCEE
Confidence 45799999999998 46799999999999999975 66766666 88899999999854 368888888 999
Q ss_pred EEEeccccccccCcc--ccceeeeeecccc--ceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCc
Q 036314 93 RLWKFDAEELVNHPK--KIRSFKILRGHKA--SVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQ 168 (347)
Q Consensus 93 ~~wd~~~~~~~~~~~--~~~~~~~~~~h~~--~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~ 168 (347)
++||+...+...... .......+..|.. .+.+++|+|+++++++++.|+.|++||+.+.
T Consensus 145 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~----------------- 207 (369)
T 3zwl_B 145 NIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNN----------------- 207 (369)
T ss_dssp EEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTT-----------------
T ss_pred EEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCC-----------------
Confidence 999997654322111 1123345667776 8999999999999999999999999998752
Q ss_pred cccccccccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecC
Q 036314 169 VEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGS 247 (347)
Q Consensus 169 ~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~ 247 (347)
......+..|...|.++.| +++.+|++++.|+.|++||+++++.+..+.....+.++.+++++ ..+++++.
T Consensus 208 -------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~ 279 (369)
T 3zwl_B 208 -------YEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETDCPLNTAVITPLK-EFIILGGG 279 (369)
T ss_dssp -------TEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSS-SEEEEEEC
T ss_pred -------cEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecCCCCceeEEecCCC-ceEEEeec
Confidence 1234566778899999998 57788999999999999999999888888777788899997665 56677777
Q ss_pred CC--------------cEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccce
Q 036314 248 DP--------------ILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLS 309 (347)
Q Consensus 248 d~--------------~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~ 309 (347)
++ .+++||+... .+...+.+|...|.+++|+|++. +|++++.||.|++||++++....
T Consensus 280 ~~~~~~~~~~~~~~~~~i~~~d~~~~---~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~~dg~v~iw~~~~~~~~~ 351 (369)
T 3zwl_B 280 QEAKDVTTTSANEGKFEARFYHKIFE---EEIGRVQGHFGPLNTVAISPQGT-SYASGGEDGFIRLHHFEKSYFDF 351 (369)
T ss_dssp CC-------------CEEEEEETTTC---CEEEEEECCSSCEEEEEECTTSS-EEEEEETTSEEEEEEECHHHHTC
T ss_pred CCCceEEEEecCCCcceeEEEecCCC---cchhheecccCcEEEEEECCCCC-EEEEEcCCCeEEEEECccccchh
Confidence 77 8999998753 34678889999999999999986 69999999999999998764433
No 112
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=6.4e-31 Score=242.33 Aligned_cols=231 Identities=23% Similarity=0.449 Sum_probs=194.0
Q ss_pred eeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeC
Q 036314 60 LEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSW 139 (347)
Q Consensus 60 l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~ 139 (347)
..+|...|.++.+. + ..|++|+.||+|++||+.+++ ....+.+|..+|.+++| +++++++|+.
T Consensus 129 ~~~~~~~v~~~~~d--~----~~l~~g~~dg~i~iwd~~~~~---------~~~~~~~h~~~v~~l~~--~~~~l~sg~~ 191 (435)
T 1p22_A 129 RSETSKGVYCLQYD--D----QKIVSGLRDNTIKIWDKNTLE---------CKRILTGHTGSVLCLQY--DERVIITGSS 191 (435)
T ss_dssp CCSSCCCEEEEECC--S----SEEEEEESSSCEEEEESSSCC---------EEEEECCCSSCEEEEEC--CSSEEEEEET
T ss_pred ccCCCCcEEEEEEC--C----CEEEEEeCCCeEEEEeCCCCe---------EEEEEcCCCCcEEEEEE--CCCEEEEEcC
Confidence 34566779988772 2 369999999999999987654 45678899999999998 7889999999
Q ss_pred CCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeCCCCeEEEEecCCcEEEEECCCCce
Q 036314 140 DCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKD 219 (347)
Q Consensus 140 Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~dg~v~vwd~~~~~~ 219 (347)
||+|++||+.++ +.+..+.+|...|.++.|. ++.+++++.||+|++||++++..
T Consensus 192 dg~i~vwd~~~~-------------------------~~~~~~~~h~~~v~~l~~~-~~~l~s~s~dg~i~vwd~~~~~~ 245 (435)
T 1p22_A 192 DSTVRVWDVNTG-------------------------EMLNTLIHHCEAVLHLRFN-NGMMVTCSKDRSIAVWDMASPTD 245 (435)
T ss_dssp TSCEEEEESSSC-------------------------CEEEEECCCCSCEEEEECC-TTEEEEEETTSCEEEEECSSSSC
T ss_pred CCeEEEEECCCC-------------------------cEEEEEcCCCCcEEEEEEc-CCEEEEeeCCCcEEEEeCCCCCC
Confidence 999999998754 2355677899999999985 46899999999999999988765
Q ss_pred ee---eee-eCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCC
Q 036314 220 LS---DIF-CGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDG 295 (347)
Q Consensus 220 ~~---~~~-~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~ 295 (347)
.. .+. +...+.++++ ++..+++|+.|+.|++||++.. ..+..+.+|...|.++.|++ .+|++|+.|+
T Consensus 246 ~~~~~~~~~~~~~v~~~~~---~~~~l~s~~~dg~i~vwd~~~~---~~~~~~~~~~~~v~~~~~~~---~~l~~g~~dg 316 (435)
T 1p22_A 246 ITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIKVWNTSTC---EFVRTLNGHKRGIACLQYRD---RLVVSGSSDN 316 (435)
T ss_dssp CEEEEEECCCSSCEEEEEE---ETTEEEEEETTSEEEEEETTTC---CEEEEEECCSSCEEEEEEET---TEEEEEETTS
T ss_pred ceeeeEecCCCCcEEEEEe---CCCEEEEEeCCCeEEEEECCcC---cEEEEEcCCCCcEEEEEeCC---CEEEEEeCCC
Confidence 42 222 2346778887 3458899999999999999753 34778889999999999953 3699999999
Q ss_pred cEEEEEcCCCccceeecCCCCeEEEEeecCCCEEEEccCCceEEEeec
Q 036314 296 KVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGGVDSKLCVSSG 343 (347)
Q Consensus 296 ~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~D~~v~vw~~ 343 (347)
.|++||+++++.+.++.+|.+.|.++.| ++.+|++|+.||+|+||+.
T Consensus 317 ~i~iwd~~~~~~~~~~~~h~~~v~~~~~-~~~~l~sg~~dg~i~vwd~ 363 (435)
T 1p22_A 317 TIRLWDIECGACLRVLEGHEELVRCIRF-DNKRIVSGAYDGKIKVWDL 363 (435)
T ss_dssp CEEEEETTTCCEEEEECCCSSCEEEEEC-CSSEEEEEETTSCEEEEEH
T ss_pred eEEEEECCCCCEEEEEeCCcCcEEEEEe-cCCEEEEEeCCCcEEEEEC
Confidence 9999999999999999999999999999 7889999999999999985
No 113
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=2.1e-31 Score=242.91 Aligned_cols=246 Identities=15% Similarity=0.168 Sum_probs=192.4
Q ss_pred CCCCcCCceeeccCCC--CCEEEEEecCCeEEEEcCC-C-------eEEEEeeccCCceEEEEEeecCCCceEEEEEccC
Q 036314 19 EPSLHDDWVSAVDGSN--PGFILTGCYDNLGRVWKAG-G-------VCTHILEGHCGAVSSVNIIKSDGLKYVTVATASK 88 (347)
Q Consensus 19 ~~~~h~~~v~~~~~~~--~~~l~sg~~d~~i~iw~~~-~-------~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~ 88 (347)
...+|.+.|+++++++ +.+|++|+.|++|++|+.. + ..+..+.+|...|.+++|+|++. ..|++++.
T Consensus 76 ~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~---~~l~s~~~ 152 (402)
T 2aq5_A 76 LVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQ---NVLLSAGC 152 (402)
T ss_dssp CBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBT---TEEEEEET
T ss_pred eEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCC---CEEEEEcC
Confidence 3568999999999874 5699999999999999974 3 45678999999999999999642 36999999
Q ss_pred CCcEEEEeccccccccCccccceeeee--eccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCC
Q 036314 89 DQTLRLWKFDAEELVNHPKKIRSFKIL--RGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGN 166 (347)
Q Consensus 89 Dg~v~~wd~~~~~~~~~~~~~~~~~~~--~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~ 166 (347)
|++|++||+.+++ ....+ .+|...|.+++|+|++++|++++.|++|++||+.+.
T Consensus 153 dg~i~iwd~~~~~---------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~--------------- 208 (402)
T 2aq5_A 153 DNVILVWDVGTGA---------AVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKG--------------- 208 (402)
T ss_dssp TSCEEEEETTTTE---------EEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTT---------------
T ss_pred CCEEEEEECCCCC---------ccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCC---------------
Confidence 9999999998654 34556 689999999999999999999999999999998753
Q ss_pred Cccccccccccccccc-cCCccc-eEEEEe-CCCCeEEEE---ecCCcEEEEECCCCce-eeee--eeCeeeEEEEeeCC
Q 036314 167 NQVEEPQLEGEAISTL-VGHTQC-VSSVVW-PQQETIYSA---SWDHSVRTWDVEMGKD-LSDI--FCGKALNCIDIGGE 237 (347)
Q Consensus 167 ~~~~~~~~~~~~~~~~-~~h~~~-v~~~~~-~~~~~l~s~---s~dg~v~vwd~~~~~~-~~~~--~~~~~~~~~~~~~~ 237 (347)
..+..+ .+|... +..+.| +++..|+++ +.|+.|++||++++.. +... .....+.++.++++
T Consensus 209 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~ 278 (402)
T 2aq5_A 209 ----------TVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPD 278 (402)
T ss_dssp ----------EEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETT
T ss_pred ----------ceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCC
Confidence 223344 566655 777777 466667777 6899999999988654 2222 23456788999887
Q ss_pred CCcEEEEecCCCcEEEEeCCCCCCCCCeEEecC--CCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCc
Q 036314 238 GSALIAAGGSDPILRIWDPRKPGTSAPVFQFSS--HNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAW 306 (347)
Q Consensus 238 ~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~--h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~ 306 (347)
+..++++|+.|+.|++||++.... ....+.. |...|.+++|+|++.. ++ +.|+.+++|++.++.
T Consensus 279 ~~~l~~~g~~dg~i~i~d~~~~~~--~~~~l~~~~~~~~v~~~~~sp~~~~-~~--s~~~~~~~~~l~~~~ 344 (402)
T 2aq5_A 279 TNIVYLCGKGDSSIRYFEITSEAP--FLHYLSMFSSKESQRGMGYMPKRGL-EV--NKCEIARFYKLHERK 344 (402)
T ss_dssp TTEEEEEETTCSCEEEEEECSSTT--CEEEEEEECCSSCCSEEEECCGGGS-CG--GGTEEEEEEEEETTE
T ss_pred CCEEEEEEcCCCeEEEEEecCCCc--ceEeecccccCCcccceEEeccccc-ce--ecceeEEEEEcCCCc
Confidence 765556777899999999975432 1333333 5689999999999854 44 467799999998754
No 114
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=8.3e-31 Score=228.15 Aligned_cols=256 Identities=13% Similarity=0.164 Sum_probs=172.0
Q ss_pred EEEEEecCCeEEEEcC-CC---eEEEEeeccCCceEEEEEeecCCC------------ceEEEEEccCCCcEEEEecccc
Q 036314 37 FILTGCYDNLGRVWKA-GG---VCTHILEGHCGAVSSVNIIKSDGL------------KYVTVATASKDQTLRLWKFDAE 100 (347)
Q Consensus 37 ~l~sg~~d~~i~iw~~-~~---~~~~~l~~h~~~V~~v~~~~~~~~------------~~~~l~s~s~Dg~v~~wd~~~~ 100 (347)
-++++|. .+|++|++ .+ .+++++.+|+.+|..|.+.|+... ....|+.+++|..++.|.+
T Consensus 56 ~~~~~~~-~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~--- 131 (356)
T 2w18_A 56 CIITACE-DVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLL--- 131 (356)
T ss_dssp EEEEEES-SEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEE---
T ss_pred EEEEecc-ceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEE---
Confidence 5777775 58999996 46 688999999999999999884321 0112222222222222221
Q ss_pred ccccCccccceeeeeeccccceEEEEEeCCCCEEEEee--CCCcEEEEecCCCCCCCccceeeeccCCCccccccccccc
Q 036314 101 ELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGS--WDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEA 178 (347)
Q Consensus 101 ~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs--~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (347)
-.+|...|.++ ++++++.+++ .|++|++|++... +..
T Consensus 132 --------------s~g~~~~v~~l---~~g~lv~ss~~g~d~~V~~~~~s~d------------------------G~~ 170 (356)
T 2w18_A 132 --------------KSGNIKAVLGL---TKRRLVSSSGTLSDQQVEVMTFAED------------------------GGG 170 (356)
T ss_dssp --------------EEEEEEEEEEE---TTTEEEEEESSSTTCEEEEEEECTT------------------------SCE
T ss_pred --------------eCCCeEEEEec---CCCcEEEecccCCCCcEEEEEECCC------------------------Cce
Confidence 13455445444 4555555533 5788888877421 233
Q ss_pred cccccCCccceEEEEe-C---CCCeEEEEecCCcEEEEECCCCceeeeeeeCe----eeEEEEeeCCCCcE---------
Q 036314 179 ISTLVGHTQCVSSVVW-P---QQETIYSASWDHSVRTWDVEMGKDLSDIFCGK----ALNCIDIGGEGSAL--------- 241 (347)
Q Consensus 179 ~~~~~~h~~~v~~~~~-~---~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~----~~~~~~~~~~~~~~--------- 241 (347)
+..+.+|...+..++| + +++.|+|++.|++|+|||+++++.++++..+. .+.+++|+|++..+
T Consensus 171 ~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~ 250 (356)
T 2w18_A 171 KENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAK 250 (356)
T ss_dssp EEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC-----
T ss_pred eeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCc
Confidence 4455677777777766 3 45789999999999999999999988886322 35667787754322
Q ss_pred --EEEecCCCcEEEEeCCCCCCCCCeEEe-----cCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCC
Q 036314 242 --IAAGGSDPILRIWDPRKPGTSAPVFQF-----SSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSH 314 (347)
Q Consensus 242 --la~~~~d~~i~iwd~~~~~~~~~~~~~-----~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h 314 (347)
+++|+.|++|++||+... ..+..+ .+|...+.+..++ + .++|+++.|++|+|||+++++.++++.+|
T Consensus 251 w~laSGs~D~tIklWd~~tg---k~l~v~~~~~p~Gh~~~~lsg~~s--g-~~lASgS~DgTIkIWDl~tGk~l~tL~gH 324 (356)
T 2w18_A 251 ESESLRSPVFQLIVINPKTT---LSVGVMLYCLPPGQAGRFLEGDVK--D-HCAAAILTSGTIAIWDLLLGQCTALLPPV 324 (356)
T ss_dssp -------CCEEEEEEETTTT---EEEEEEEECCCTTCCCCEEEEEEE--T-TEEEEEETTSCEEEEETTTCSEEEEECCC
T ss_pred ceeeccCCCcEEEEEECCCC---EEEEEEEeeccCCCcceeEccccC--C-CEEEEEcCCCcEEEEECCCCcEEEEecCC
Confidence 367889999999998642 222222 4676665555554 3 36999999999999999999999999999
Q ss_pred CCeEE-EEeecC-CCEEEEccCCceEEEeec
Q 036314 315 KDKVL-CADWWR-GDSVISGGVDSKLCVSSG 343 (347)
Q Consensus 315 ~~~v~-~~~~~~-~~~l~s~s~D~~v~vw~~ 343 (347)
.+.+. +++|+| |++|+||+.|++|+||+.
T Consensus 325 ~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 325 SDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp --CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred CCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 88766 589986 778999999999999983
No 115
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.98 E-value=2.4e-30 Score=231.76 Aligned_cols=252 Identities=12% Similarity=0.178 Sum_probs=194.2
Q ss_pred CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCE
Q 036314 54 GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNM 133 (347)
Q Consensus 54 ~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~ 133 (347)
...++.+.+|.+.|.+++|+|+.. ++..|++|+.||+|++||+.... ......+.+|..+|.+++|+|++++
T Consensus 29 ~~~~~~~~~h~~~v~~~~~~~~~~-~g~~l~~~~~dg~i~iw~~~~~~-------~~~~~~~~~h~~~v~~~~~~~~~~~ 100 (368)
T 3mmy_A 29 MKDIEVTSSPDDSIGCLSFSPPTL-PGNFLIAGSWANDVRCWEVQDSG-------QTIPKAQQMHTGPVLDVCWSDDGSK 100 (368)
T ss_dssp TCCEECSSCCSSCEEEEEECCTTS-SSEEEEEEETTSEEEEEEECTTS-------CEEEEEEEECSSCEEEEEECTTSSE
T ss_pred cceeEeccCCCCceEEEEEcCCCC-CceEEEEECCCCcEEEEEcCCCC-------ceeEEEeccccCCEEEEEECcCCCE
Confidence 345678899999999999999531 13589999999999999997521 1123567889999999999999999
Q ss_pred EEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe--C-CCCeEEEEecCCcEE
Q 036314 134 VCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW--P-QQETIYSASWDHSVR 210 (347)
Q Consensus 134 l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~--~-~~~~l~s~s~dg~v~ 210 (347)
|++++.|++|++||+.+.. ...+.+|...|.++.| . ++..|++++.|+.|+
T Consensus 101 l~s~~~dg~v~iwd~~~~~--------------------------~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~ 154 (368)
T 3mmy_A 101 VFTASCDKTAKMWDLSSNQ--------------------------AIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLK 154 (368)
T ss_dssp EEEEETTSEEEEEETTTTE--------------------------EEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEE
T ss_pred EEEEcCCCcEEEEEcCCCC--------------------------ceeeccccCceEEEEEEeCCCCCEEEEccCCCcEE
Confidence 9999999999999987532 1124568899999998 4 566799999999999
Q ss_pred EEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEe-cCCCCCeeEEEeCCCC---Ce
Q 036314 211 TWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQF-SSHNSWISACKWHNKS---WF 286 (347)
Q Consensus 211 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~-~~h~~~v~~v~~s~~~---~~ 286 (347)
+||+++++.+..+.....+.++.+.++ .+++++.++.+++||++.... ....+ ..+...+.++.+.++. ..
T Consensus 155 vwd~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (368)
T 3mmy_A 155 FWDTRSSNPMMVLQLPERCYCADVIYP---MAVVATAERGLIVYQLENQPS--EFRRIESPLKHQHRCVAIFKDKQNKPT 229 (368)
T ss_dssp EECSSCSSCSEEEECSSCEEEEEEETT---EEEEEEGGGCEEEEECSSSCE--EEEECCCSCSSCEEEEEEEECTTSCEE
T ss_pred EEECCCCcEEEEEecCCCceEEEecCC---eeEEEeCCCcEEEEEeccccc--hhhhccccccCCCceEEEcccCCCCCC
Confidence 999999988887776666677776543 567778899999999975321 11111 1223334444443332 12
Q ss_pred EEEEEeCCCcEEEEEcCCC---ccceeecCCCC------------eEEEEeecC-CCEEEEccCCceEEEeecc
Q 036314 287 HLISASYDGKVMLWDLRTA---WPLSVIDSHKD------------KVLCADWWR-GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 287 ~l~s~s~D~~i~lwd~~~~---~~~~~~~~h~~------------~v~~~~~~~-~~~l~s~s~D~~v~vw~~~ 344 (347)
.+++++.|+.|++||++.. ..+..+.+|.. .|.+++|+| +++|++++.|+.|+||+..
T Consensus 230 ~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~ 303 (368)
T 3mmy_A 230 GFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKD 303 (368)
T ss_dssp EEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETT
T ss_pred eEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECC
Confidence 3999999999999999987 45667788876 699999986 6689999999999999965
No 116
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.98 E-value=4.8e-29 Score=226.04 Aligned_cols=263 Identities=11% Similarity=0.058 Sum_probs=203.8
Q ss_pred CEEEEEecCCeEEEEcCC-CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeee
Q 036314 36 GFILTGCYDNLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKI 114 (347)
Q Consensus 36 ~~l~sg~~d~~i~iw~~~-~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~ 114 (347)
.++++++.|++|++||.. +++...+.+|.. +.+++|+|++. ..+++++.|++|++||+.++++ ...
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~~-~~~~~~s~dg~---~l~~~~~~d~~i~v~d~~~~~~---------~~~ 69 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGSN-PMGAVISPDGT---KVYVANAHSNDVSIIDTATNNV---------IAT 69 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSSS-EEEEEECTTSS---EEEEEEGGGTEEEEEETTTTEE---------EEE
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCCC-cceEEECCCCC---EEEEECCCCCeEEEEECCCCeE---------EEE
Confidence 368899999999999975 677778887755 89999998543 2457888999999999977643 334
Q ss_pred eeccccceEEEEEeCCCCEEE-EeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEE
Q 036314 115 LRGHKASVHSIAAETSGNMVC-SGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVV 193 (347)
Q Consensus 115 ~~~h~~~V~~v~~s~~~~~l~-sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 193 (347)
+..|. .+.+++|+|++++++ +++.|++|++||+.+.. .+..+..| ..+.+++
T Consensus 70 ~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~-------------------------~~~~~~~~-~~~~~~~ 122 (391)
T 1l0q_A 70 VPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNT-------------------------VAGTVKTG-KSPLGLA 122 (391)
T ss_dssp EECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTE-------------------------EEEEEECS-SSEEEEE
T ss_pred EECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCe-------------------------EEEEEeCC-CCcceEE
Confidence 44444 899999999999775 56678999999987542 12223333 3567888
Q ss_pred e-CCCCeE-EEEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCC
Q 036314 194 W-PQQETI-YSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSH 271 (347)
Q Consensus 194 ~-~~~~~l-~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h 271 (347)
| ++++.+ ++++.|+.|++||+++++.+..+..+..+.++.+++++..++++++.++.|++||++.. .....+ .+
T Consensus 123 ~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~---~~~~~~-~~ 198 (391)
T 1l0q_A 123 LSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTN---SVIDTV-KV 198 (391)
T ss_dssp ECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT---EEEEEE-EC
T ss_pred ECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCC---eEEEEE-ec
Confidence 8 566766 68888999999999998887777666677889998877666678889999999998753 223333 35
Q ss_pred CCCeeEEEeCCCCCeEEEEEe---CCCcEEEEEcCCCccceeecCCCCeEEEEeecC-CCEE-EEccCCceEEEeecc
Q 036314 272 NSWISACKWHNKSWFHLISAS---YDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSV-ISGGVDSKLCVSSGV 344 (347)
Q Consensus 272 ~~~v~~v~~s~~~~~~l~s~s---~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l-~s~s~D~~v~vw~~~ 344 (347)
...+.+++|+|++.+ |++++ .|+.|++||+++++.+..+..|. .+.+++|++ |++| ++++.|++|++|+..
T Consensus 199 ~~~~~~~~~~~~g~~-l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~ 274 (391)
T 1l0q_A 199 EAAPSGIAVNPEGTK-AYVTNVDKYFNTVSMIDTGTNKITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTA 274 (391)
T ss_dssp SSEEEEEEECTTSSE-EEEEEECSSCCEEEEEETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred CCCccceEECCCCCE-EEEEecCcCCCcEEEEECCCCeEEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECC
Confidence 668899999999976 55555 78999999999988888887765 578899985 6565 788999999999864
No 117
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.98 E-value=2.2e-29 Score=231.33 Aligned_cols=275 Identities=10% Similarity=0.014 Sum_probs=212.0
Q ss_pred CceeeccCCCC-CEEEEEecCCeEEEEcCC-CeEEE-----EeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEec
Q 036314 25 DWVSAVDGSNP-GFILTGCYDNLGRVWKAG-GVCTH-----ILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKF 97 (347)
Q Consensus 25 ~~v~~~~~~~~-~~l~sg~~d~~i~iw~~~-~~~~~-----~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~ 97 (347)
..+.+++++++ .++++++.|++|++||.. +...+ .+.+|.+.|.+++|+++ +..+++++.|++|++||+
T Consensus 123 ~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~~~s~~~d~~v~~~d~ 198 (433)
T 3bws_A 123 FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEH----NELWVSQMQANAVHVFDL 198 (433)
T ss_dssp SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGG----TEEEEEEGGGTEEEEEET
T ss_pred CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCC----CEEEEEECCCCEEEEEEC
Confidence 44567787754 478888889999999975 56655 45589999999999763 357899999999999998
Q ss_pred cccccccCccccceeeeeeccccceEEEEEeCCCCEEE-EeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccc
Q 036314 98 DAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVC-SGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEG 176 (347)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~-sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (347)
.+++ ....+..|...+.+++|+|+++.++ +++.|++|++||+.+..
T Consensus 199 ~~~~---------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~------------------------ 245 (433)
T 3bws_A 199 KTLA---------YKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKL------------------------ 245 (433)
T ss_dssp TTCC---------EEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTE------------------------
T ss_pred CCce---------EEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCc------------------------
Confidence 7654 3456678999999999999998775 55689999999987532
Q ss_pred cccccccCCccceEEEEe-CCCCeEEEEe--------cCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecC
Q 036314 177 EAISTLVGHTQCVSSVVW-PQQETIYSAS--------WDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGS 247 (347)
Q Consensus 177 ~~~~~~~~h~~~v~~~~~-~~~~~l~s~s--------~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~ 247 (347)
.+..+..+ ..+.+++| |+++.+++++ .|+.|++||+++++.+..+.....+.++++++++..++++++.
T Consensus 246 -~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~ 323 (433)
T 3bws_A 246 -EIRKTDKI-GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMC 323 (433)
T ss_dssp -EEEECCCC-SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETT
T ss_pred -EEEEecCC-CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecC
Confidence 12223332 34778887 5777888887 4889999999988776666555567788998877677788899
Q ss_pred CCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeC---------------CCcEEEEEcCCCccceeec
Q 036314 248 DPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASY---------------DGKVMLWDLRTAWPLSVID 312 (347)
Q Consensus 248 d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~---------------D~~i~lwd~~~~~~~~~~~ 312 (347)
|+.|++||++.. .....+ .+...+.+++|+|++.. |++++. ||.|++||+++++.+..+.
T Consensus 324 ~~~v~v~d~~~~---~~~~~~-~~~~~~~~~~~s~dg~~-l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~ 398 (433)
T 3bws_A 324 CSKIEVYDLKEK---KVQKSI-PVFDKPNTIALSPDGKY-LYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWE 398 (433)
T ss_dssp TTEEEEEETTTT---EEEEEE-ECSSSEEEEEECTTSSE-EEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEE
T ss_pred CCEEEEEECCCC---cEEEEe-cCCCCCCeEEEcCCCCE-EEEEecCCCccccccccccccceEEEEEECCCCcEEEEec
Confidence 999999998742 223444 36778999999999875 555554 5799999999988888777
Q ss_pred CCCCeEEEEeecC-CCEEEEcc-CCceEEEeecc
Q 036314 313 SHKDKVLCADWWR-GDSVISGG-VDSKLCVSSGV 344 (347)
Q Consensus 313 ~h~~~v~~~~~~~-~~~l~s~s-~D~~v~vw~~~ 344 (347)
. ...+.+++|+| |++|++++ .|++|++|+..
T Consensus 399 ~-~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 399 A-GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp C-SSSEEEEEECTTSCEEEEEETTTTEEEEEEET
T ss_pred C-CCCCceEEEcCCCCEEEEEECCCCeEEEEEec
Confidence 6 45789999985 66777665 59999999854
No 118
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.98 E-value=3.8e-30 Score=231.80 Aligned_cols=244 Identities=15% Similarity=0.114 Sum_probs=177.5
Q ss_pred CCCcCCceeeccCCCCCEEEEE-----------ecCCeEEEEcCC--CeEEE---E-----eeccCCceEEEEEeecCCC
Q 036314 20 PSLHDDWVSAVDGSNPGFILTG-----------CYDNLGRVWKAG--GVCTH---I-----LEGHCGAVSSVNIIKSDGL 78 (347)
Q Consensus 20 ~~~h~~~v~~~~~~~~~~l~sg-----------~~d~~i~iw~~~--~~~~~---~-----l~~h~~~V~~v~~~~~~~~ 78 (347)
+.+|++.|.+++++ +..+++| +.|+++|+|+.. ..... . ...+...+.+++|+|++..
T Consensus 69 l~~~~~~v~s~~~~-~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~ 147 (365)
T 4h5i_A 69 LEDNDDSPTAIDAS-KGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTV 147 (365)
T ss_dssp CCTTSCCCCEEEEE-TTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSC
T ss_pred ccCCCCceEEEEeC-CCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCE
Confidence 56788899988864 3455554 467889999853 22211 1 1234456889999996542
Q ss_pred ceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccc
Q 036314 79 KYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQV 158 (347)
Q Consensus 79 ~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~ 158 (347)
..+++++.|++||+||+.+++ +...+ .|...|.+++|+|||+++++++.|+ +++|+..++..
T Consensus 148 --la~as~~~d~~i~iwd~~~~~---------~~~~~-~~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~~~~~----- 209 (365)
T 4h5i_A 148 --AAIASSKVPAIMRIIDPSDLT---------EKFEI-ETRGEVKDLHFSTDGKVVAYITGSS-LEVISTVTGSC----- 209 (365)
T ss_dssp --EEEEESCSSCEEEEEETTTTE---------EEEEE-ECSSCCCEEEECTTSSEEEEECSSC-EEEEETTTCCE-----
T ss_pred --EEEEECCCCCEEEEeECCCCc---------EEEEe-CCCCceEEEEEccCCceEEecccee-EEEEEeccCcc-----
Confidence 234677789999999998764 23344 4778899999999999999998665 55555443211
Q ss_pred eeeeccCCCccccccccccccccccCCccceEEEEe-CCCCeEEEEecCC----cEEEEECCCCcee----eeee-eCee
Q 036314 159 SIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDH----SVRTWDVEMGKDL----SDIF-CGKA 228 (347)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg----~v~vwd~~~~~~~----~~~~-~~~~ 228 (347)
.......+|...|.+++| |+++.+++++.|+ .+++||+...... ..+. ....
T Consensus 210 ------------------~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 271 (365)
T 4h5i_A 210 ------------------IARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKG 271 (365)
T ss_dssp ------------------EEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSC
T ss_pred ------------------eeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCC
Confidence 011234568888999998 6788899999888 6888998765432 1222 2346
Q ss_pred eEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEE-ecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCC
Q 036314 229 LNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQ-FSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTA 305 (347)
Q Consensus 229 ~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~-~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~ 305 (347)
+.+++|+|+ +.+||+|+.|++|+|||++.. .++.. +.+|...|.+++|+||+. +|||||.|++|||||+..+
T Consensus 272 V~~~~~Spd-g~~lasgs~D~~V~iwd~~~~---~~~~~~~~gH~~~V~~v~fSpdg~-~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 272 ITSMDVDMK-GELAVLASNDNSIALVKLKDL---SMSKIFKQAHSFAITEVTISPDST-YVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EEEEEECTT-SCEEEEEETTSCEEEEETTTT---EEEEEETTSSSSCEEEEEECTTSC-EEEEEETTSEEEEEECCTT
T ss_pred eEeEEECCC-CCceEEEcCCCEEEEEECCCC---cEEEEecCcccCCEEEEEECCCCC-EEEEEeCCCeEEEEEcCCC
Confidence 899999765 568999999999999998752 34555 478999999999999996 6999999999999999654
No 119
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.98 E-value=6.5e-30 Score=229.42 Aligned_cols=239 Identities=10% Similarity=0.109 Sum_probs=175.1
Q ss_pred EEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEE-
Q 036314 56 CTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMV- 134 (347)
Q Consensus 56 ~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l- 134 (347)
.+..+.+|.+.|.+++|+|++ ..|++|+.|+ +++|+++..+. . ...+...+..+++.++++.+
T Consensus 11 ~~~~~~~h~~~V~~v~fs~dg----~~la~g~~~~-~~iw~~~~~~~---------~--~~~~~~~~~~~~~~~~~~~~~ 74 (355)
T 3vu4_A 11 PIVPENHVSNPVTDYEFNQDQ----SCLILSTLKS-FEIYNVHPVAH---------I--MSQEMRHLSKVRMLHRTNYVA 74 (355)
T ss_dssp --------CCCCCEEEECTTS----SEEEEECSSE-EEEEEETTEEE---------E--EEEECSCCCEEEECTTSSEEE
T ss_pred CccccccCCCceEEEEECCCC----CEEEEEcCCE-EEEEecCCcce---------e--eeeecCCeEEEEEcCCCCEEE
Confidence 445668899999999999954 3688888775 89999875432 1 11222357778888888766
Q ss_pred EEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeCCCCeEEEEecCCcEEEEEC
Q 036314 135 CSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDV 214 (347)
Q Consensus 135 ~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~dg~v~vwd~ 214 (347)
++++.|++|++||..++. .+..+. |...|.++.+... .++. ..|+.|++||+
T Consensus 75 ~~~~~d~~v~iWd~~~~~-------------------------~~~~~~-~~~~v~~v~~~~~-~~~~-~~~~~i~i~d~ 126 (355)
T 3vu4_A 75 FVTGVKEVVHIWDDVKKQ-------------------------DVSRIK-VDAPVKDLFLSRE-FIVV-SYGDVISVFKF 126 (355)
T ss_dssp EECSSTTEEEEEETTTTE-------------------------EEEEEE-CSSCEEEEEECSS-EEEE-EETTEEEEEES
T ss_pred EEECCccEEEEEECCCCc-------------------------EEEEEE-CCCceEEEEEcCC-EEEE-EEcCEEEEEEC
Confidence 678889999999987542 233333 4567888888654 3333 35889999999
Q ss_pred CCC-ceeeeeeeCeeeEEEEeeCCCCcEEEE--ecCCCcEEEEeCCCCCC------------CCC-eEEecCCCCCeeEE
Q 036314 215 EMG-KDLSDIFCGKALNCIDIGGEGSALIAA--GGSDPILRIWDPRKPGT------------SAP-VFQFSSHNSWISAC 278 (347)
Q Consensus 215 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~la~--~~~d~~i~iwd~~~~~~------------~~~-~~~~~~h~~~v~~v 278 (347)
.++ +.+..+.. +....++.+ ..++. |+.||.|++||++.... ..+ ...+.+|.+.|.++
T Consensus 127 ~~~~~~~~~~~~--~~~~~~~s~---~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~ 201 (355)
T 3vu4_A 127 GNPWKRITDDIR--FGGVCEFSN---GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMV 201 (355)
T ss_dssp STTCCBSSCCEE--EEEEEEEET---TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEE
T ss_pred CCCceeeEEecc--CCceEEEEc---cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEE
Confidence 987 66665554 334445544 34444 68999999999975320 012 57789999999999
Q ss_pred EeCCCCCeEEEEEeCCCc-EEEEEcCCCccceeec-C-CCCeEEEEeecC-CCEEEEccCCceEEEeecc
Q 036314 279 KWHNKSWFHLISASYDGK-VMLWDLRTAWPLSVID-S-HKDKVLCADWWR-GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 279 ~~s~~~~~~l~s~s~D~~-i~lwd~~~~~~~~~~~-~-h~~~v~~~~~~~-~~~l~s~s~D~~v~vw~~~ 344 (347)
+|+|++. +||+|+.|++ |+|||+++++.+.++. + |.+.|.+++|+| |++|++++.|++|+||+..
T Consensus 202 ~~s~~g~-~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~ 270 (355)
T 3vu4_A 202 RLNRKSD-MVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIF 270 (355)
T ss_dssp EECTTSS-EEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESS
T ss_pred EECCCCC-EEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEcc
Confidence 9999985 6999999998 9999999999999997 6 999999999986 7789999999999999864
No 120
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.97 E-value=2.6e-29 Score=225.47 Aligned_cols=272 Identities=9% Similarity=0.086 Sum_probs=186.8
Q ss_pred CCCcCCceeeccCC-CCCEEEEEecCCeEEEEcCCC-eEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEec
Q 036314 20 PSLHDDWVSAVDGS-NPGFILTGCYDNLGRVWKAGG-VCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKF 97 (347)
Q Consensus 20 ~~~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~~-~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~ 97 (347)
...|.+.|++++|+ ++.+||+|+.|+ +++|+... ..... .+...+..+.+.+..+ ..+++++.|++|++||+
T Consensus 15 ~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~--~~~~~~~~~~~~~~~~---~~~~~~~~d~~v~iWd~ 88 (355)
T 3vu4_A 15 ENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMS--QEMRHLSKVRMLHRTN---YVAFVTGVKEVVHIWDD 88 (355)
T ss_dssp ----CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEE--EECSCCCEEEECTTSS---EEEEECSSTTEEEEEET
T ss_pred cccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeee--eecCCeEEEEEcCCCC---EEEEEECCccEEEEEEC
Confidence 46799999999998 456888887665 78999753 33222 2223477777776443 24467888999999998
Q ss_pred cccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccccc
Q 036314 98 DAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGE 177 (347)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (347)
.+++. +..+. |..+|.+++|+++. ++. ..|+.|++||+.+...
T Consensus 89 ~~~~~---------~~~~~-~~~~v~~v~~~~~~--~~~-~~~~~i~i~d~~~~~~------------------------ 131 (355)
T 3vu4_A 89 VKKQD---------VSRIK-VDAPVKDLFLSREF--IVV-SYGDVISVFKFGNPWK------------------------ 131 (355)
T ss_dssp TTTEE---------EEEEE-CSSCEEEEEECSSE--EEE-EETTEEEEEESSTTCC------------------------
T ss_pred CCCcE---------EEEEE-CCCceEEEEEcCCE--EEE-EEcCEEEEEECCCCce------------------------
Confidence 87643 33443 66789999998764 333 3488999999876410
Q ss_pred ccccccCCccceEEEEeCCCCeEEE--EecCCcEEEEECCCCc----------------eeeeee-eCeeeEEEEeeCCC
Q 036314 178 AISTLVGHTQCVSSVVWPQQETIYS--ASWDHSVRTWDVEMGK----------------DLSDIF-CGKALNCIDIGGEG 238 (347)
Q Consensus 178 ~~~~~~~h~~~v~~~~~~~~~~l~s--~s~dg~v~vwd~~~~~----------------~~~~~~-~~~~~~~~~~~~~~ 238 (347)
.+..+.. ...+.++. . ..++. ++.||.|++||++++. .+..+. +...+.+++|+|+
T Consensus 132 ~~~~~~~-~~~~~~~s--~-~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~- 206 (355)
T 3vu4_A 132 RITDDIR-FGGVCEFS--N-GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRK- 206 (355)
T ss_dssp BSSCCEE-EEEEEEEE--T-TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTT-
T ss_pred eeEEecc-CCceEEEE--c-cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCC-
Confidence 1112221 12223332 2 55554 6899999999998765 133343 3457899999774
Q ss_pred CcEEEEecCCCc-EEEEeCCCCCCCCCeEEec-C-CCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccc--eeec-
Q 036314 239 SALIAAGGSDPI-LRIWDPRKPGTSAPVFQFS-S-HNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPL--SVID- 312 (347)
Q Consensus 239 ~~~la~~~~d~~-i~iwd~~~~~~~~~~~~~~-~-h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~--~~~~- 312 (347)
+.+||+|+.|++ |++||++.. ..+..+. + |...|.+++|+|++. +|++++.|++|++||++.+... ..+.
T Consensus 207 g~~l~s~s~d~~~v~iwd~~~~---~~~~~~~~g~h~~~v~~~~~s~~~~-~l~s~s~d~~v~iw~~~~~~~~~~~~~~~ 282 (355)
T 3vu4_A 207 SDMVATCSQDGTIIRVFKTEDG---VLVREFRRGLDRADVVDMKWSTDGS-KLAVVSDKWTLHVFEIFNDQDNKRHALKG 282 (355)
T ss_dssp SSEEEEEETTCSEEEEEETTTC---CEEEEEECTTCCSCEEEEEECTTSC-EEEEEETTCEEEEEESSCCSCCCSEETTT
T ss_pred CCEEEEEeCCCCEEEEEECCCC---cEEEEEEcCCCCCcEEEEEECCCCC-EEEEEECCCEEEEEEccCCCCcccccccc
Confidence 578999999998 999999753 3466776 5 999999999999986 5999999999999999865321 1111
Q ss_pred --------------------CCCCeEEEEeecC-CCEEEEccCCceEEEeec
Q 036314 313 --------------------SHKDKVLCADWWR-GDSVISGGVDSKLCVSSG 343 (347)
Q Consensus 313 --------------------~h~~~v~~~~~~~-~~~l~s~s~D~~v~vw~~ 343 (347)
.+......++|++ |++|++++.||.+++|+.
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~ 334 (355)
T 3vu4_A 283 WINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKV 334 (355)
T ss_dssp TEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEE
T ss_pred eeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEE
Confidence 1112235678975 668999999999999974
No 121
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.6e-30 Score=240.17 Aligned_cols=267 Identities=10% Similarity=0.020 Sum_probs=194.5
Q ss_pred CCcCCCCCcCCceeeccCCCCCEEEEEecCCeEEEEcCCCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEE
Q 036314 15 QKEEEPSLHDDWVSAVDGSNPGFILTGCYDNLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRL 94 (347)
Q Consensus 15 ~~~~~~~~h~~~v~~~~~~~~~~l~sg~~d~~i~iw~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~ 94 (347)
+..+...+|...|.+++|++++ .++++++|+..+.....+ +|+..|.+++|+|++. .||+++.||+|++
T Consensus 43 ~~~~~l~gh~~~v~~V~FsPdg------~~~~~~~~~~~~~~~~~~-~~~~~V~~vawSPdG~----~LAs~s~dg~V~i 111 (588)
T 2j04_A 43 KYAKDINCNSKNLFHVKEFPLE------FENKLDFELAQQNGLLNS-QPVCYPRVCKPSPIDD----WMAVLSNNGNVSV 111 (588)
T ss_dssp CCCSCCSSBGGGTEEEEEECCC------CCCTTTTSCCCSSCSSTT-SCSCCEEEEEECSSSS----CEEEEETTSCEEE
T ss_pred cccceecCCCccEEEEEECCCC------CcceEEEEeCCCceEeec-CCCCcEEEEEECCCCC----EEEEEeCCCcEEE
Confidence 3334457999999999998765 677777777554332222 5688899999999554 6999999999999
Q ss_pred EeccccccccCccccceeeeeecccc-----ceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcc
Q 036314 95 WKFDAEELVNHPKKIRSFKILRGHKA-----SVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQV 169 (347)
Q Consensus 95 wd~~~~~~~~~~~~~~~~~~~~~h~~-----~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~ 169 (347)
||.+. .+..+. |.. .|.+++|||||++|++|+.||+|+|||+.++.......
T Consensus 112 wd~~~-----------~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~----------- 168 (588)
T 2j04_A 112 FKDNK-----------MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEF----------- 168 (588)
T ss_dssp EETTE-----------EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCC-----------
T ss_pred EeCCc-----------eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccc-----------
Confidence 99643 344556 665 49999999999999999999999999987642100000
Q ss_pred ccccccccccccc----cCCccceEEEEeCCCCeEEEEecCCcEEEEECCCCcee---eeee--eCeeeEEEEeeCCCCc
Q 036314 170 EEPQLEGEAISTL----VGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDL---SDIF--CGKALNCIDIGGEGSA 240 (347)
Q Consensus 170 ~~~~~~~~~~~~~----~~h~~~v~~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~---~~~~--~~~~~~~~~~~~~~~~ 240 (347)
-.+.++ .+|..+|.+++|+++. +++++.|+++++||+..+... ..+. +...+..++|+ + .
T Consensus 169 -------i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g-~ 237 (588)
T 2j04_A 169 -------YFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--D-Y 237 (588)
T ss_dssp -------EEEEEEECSCTTCCCCEEEEEEETTE-EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--T-T
T ss_pred -------eeeeeeecccccccccEEEEEEcCCc-EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--C-C
Confidence 012233 6688899999995444 899999999999999876632 3343 23468889997 3 5
Q ss_pred EEEEecCCCcEEEEeCCCCCCCCCeEEec-CCCCCeeEEEe--CCCCCeEEEEEeCCCcEEEEEcCC------C------
Q 036314 241 LIAAGGSDPILRIWDPRKPGTSAPVFQFS-SHNSWISACKW--HNKSWFHLISASYDGKVMLWDLRT------A------ 305 (347)
Q Consensus 241 ~la~~~~d~~i~iwd~~~~~~~~~~~~~~-~h~~~v~~v~~--s~~~~~~l~s~s~D~~i~lwd~~~------~------ 305 (347)
.+|+++ +++|++||+... . ...+. +|.+.|.+++| +|++ ..|+++++||+ ++|..+. +
T Consensus 238 ~LASa~-~~tIkLWd~~~~---~-~~~~~~gh~~~V~~va~~~s~d~-~~La~a~edG~-klw~~d~~~~spd~~l~a~~ 310 (588)
T 2j04_A 238 KVVLTC-PGYVHKIDLKNY---S-ISSLKTGSLENFHIIPLNHEKES-TILLMSNKTSY-KVLLEDELHVTADNIIAPYL 310 (588)
T ss_dssp EEEEEC-SSEEEEEETTTT---E-EEEEECSCCSCCCEEEETTCSSC-EEEEECSSCEE-EEEESSSEEEECCCSSHHHH
T ss_pred EEEEEe-CCeEEEEECCCC---e-EEEEEcCCCceEEEEEeeeCCCC-CEEEEEcCCCC-EEEeeccEEECCCceEEEEc
Confidence 778776 699999998742 1 22333 89999999999 9998 46999999999 9998631 1
Q ss_pred -----------ccceeecCCCCeEEEEeecC-CCEEEEccC
Q 036314 306 -----------WPLSVIDSHKDKVLCADWWR-GDSVISGGV 334 (347)
Q Consensus 306 -----------~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~ 334 (347)
.....+++ ...|++++|+| |+.+|+++.
T Consensus 311 d~~v~lW~~~g~~l~~~~~-~~~I~~va~SPdG~~lA~~~~ 350 (588)
T 2j04_A 311 EKKFKKWSTIWNEFNNYET-TLVIHGISLSPDGYSIAIVYD 350 (588)
T ss_dssp HHHHHHTTTTTTSSSSSCC-EEEEEEEEECTTSSEEEEEEE
T ss_pred CCEEEEEECCCCceeeecc-ceEEEEEEECCCCCEEEEEEe
Confidence 11222222 44589999986 668888763
No 122
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=4.6e-29 Score=222.71 Aligned_cols=230 Identities=13% Similarity=0.094 Sum_probs=169.6
Q ss_pred ceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccc
Q 036314 79 KYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQV 158 (347)
Q Consensus 79 ~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~ 158 (347)
+...|++|+.||+|++||+.+++. +..+. ...|.++.++|+ +++++.|++|++|+.....
T Consensus 47 d~~~l~sg~~Dg~v~iwd~~~~~~---------~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~------ 106 (343)
T 3lrv_A 47 DKWVCMCRCEDGALHFTQLKDSKT---------ITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQI------ 106 (343)
T ss_dssp EEEEEEEEEETTEEEEEEESSSSC---------EEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEE------
T ss_pred CCCEEEEECCCCcEEEEECCCCcE---------EEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCce------
Confidence 456899999999999999987653 22332 466778888887 9999999999999876310
Q ss_pred eeeeccCCCccccccccccccccc-cCCccceEEEEe-C--CCCeEEEEecCCcEEEEECCCCceeeeeee--CeeeEEE
Q 036314 159 SIKKRKGNNQVEEPQLEGEAISTL-VGHTQCVSSVVW-P--QQETIYSASWDHSVRTWDVEMGKDLSDIFC--GKALNCI 232 (347)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~-~--~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~--~~~~~~~ 232 (347)
..... ..+..++.+ .+|...|.++.| | +++++++++.||+|++||+++++....... ...+.++
T Consensus 107 ~~~~~----------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~ 176 (343)
T 3lrv_A 107 TILDS----------KTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSG 176 (343)
T ss_dssp EEEET----------TTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEE
T ss_pred EEeec----------CCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEE
Confidence 00000 001112222 356788999998 5 678899999999999999999887544422 3368899
Q ss_pred EeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecC-CCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceee
Q 036314 233 DIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSS-HNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVI 311 (347)
Q Consensus 233 ~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~-h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~ 311 (347)
+++|+ +.++++|+.|+.|++||++.... ....+.+ |.+.|.+++|+|++. +|++++ |++|++||+++++.+..+
T Consensus 177 ~~~pd-g~~lasg~~dg~i~iwd~~~~~~--~~~~~~~~h~~~v~~l~fs~~g~-~l~s~~-~~~v~iwd~~~~~~~~~~ 251 (343)
T 3lrv_A 177 VLHKD-SLLLALYSPDGILDVYNLSSPDQ--ASSRFPVDEEAKIKEVKFADNGY-WMVVEC-DQTVVCFDLRKDVGTLAY 251 (343)
T ss_dssp EECTT-SCEEEEECTTSCEEEEESSCTTS--CCEECCCCTTSCEEEEEECTTSS-EEEEEE-SSBEEEEETTSSTTCBSS
T ss_pred EECCC-CCEEEEEcCCCEEEEEECCCCCC--CccEEeccCCCCEEEEEEeCCCC-EEEEEe-CCeEEEEEcCCCCcceee
Confidence 99764 56899999999999999986432 2256777 999999999999986 588888 459999999998776555
Q ss_pred cC---CCCeEE--EEeecC-CCEEEEccC-CceEEEeec
Q 036314 312 DS---HKDKVL--CADWWR-GDSVISGGV-DSKLCVSSG 343 (347)
Q Consensus 312 ~~---h~~~v~--~~~~~~-~~~l~s~s~-D~~v~vw~~ 343 (347)
.. |...+. +++|+| |++|++++. |+.|+||+.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~ 290 (343)
T 3lrv_A 252 PTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKF 290 (343)
T ss_dssp CCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred cccccccccccceEEEECCCCCEEEEecCCCCcEEEEEE
Confidence 43 444443 699975 778999888 999999964
No 123
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.1e-28 Score=226.54 Aligned_cols=245 Identities=14% Similarity=0.106 Sum_probs=189.0
Q ss_pred CcCCceeeccCCC-CCEE-EEEecCCeEEEEcCC---CeEEEEee--ccCCceEEEEEeecCCCceEEEEEccCCCcEEE
Q 036314 22 LHDDWVSAVDGSN-PGFI-LTGCYDNLGRVWKAG---GVCTHILE--GHCGAVSSVNIIKSDGLKYVTVATASKDQTLRL 94 (347)
Q Consensus 22 ~h~~~v~~~~~~~-~~~l-~sg~~d~~i~iw~~~---~~~~~~l~--~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~ 94 (347)
+|.+.|+++++++ +.+| ++|+.|++|++|+.. +.+...+. .|...|.+++|+|++ ..|++++.||.|++
T Consensus 100 ~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~----~~l~~~~~~g~v~~ 175 (450)
T 2vdu_B 100 PIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDD----TTVIIADKFGDVYS 175 (450)
T ss_dssp CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTS----SEEEEEETTSEEEE
T ss_pred ccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCC----CEEEEEeCCCcEEE
Confidence 6777899999984 5675 899999999999965 56666666 677899999999854 37999999999999
Q ss_pred EeccccccccCccccceeeeeeccccceEEEEEeCC---CCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccc
Q 036314 95 WKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETS---GNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEE 171 (347)
Q Consensus 95 wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~---~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 171 (347)
|++..++... .+...+.+|...|.+++|+|+ +++|++|+.|++|++||+.+..
T Consensus 176 ~~~~~~~~~~-----~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~------------------- 231 (450)
T 2vdu_B 176 IDINSIPEEK-----FTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCF------------------- 231 (450)
T ss_dssp EETTSCCCSS-----CCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTT-------------------
T ss_pred EecCCccccc-----ccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCc-------------------
Confidence 9987654221 023356789999999999999 9999999999999999987532
Q ss_pred cccccccccc-ccCCccceEEEEeCCCCeEEEEecCCcEEEEECCCCceeeeeeeC------------------------
Q 036314 172 PQLEGEAIST-LVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCG------------------------ 226 (347)
Q Consensus 172 ~~~~~~~~~~-~~~h~~~v~~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~------------------------ 226 (347)
.+.. +.+|...|.+++|+++++|++++.|++|++||+++++.+..+...
T Consensus 232 ------~~~~~~~~h~~~v~~~~~sd~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (450)
T 2vdu_B 232 ------IVDKWLFGHKHFVSSICCGKDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDI 305 (450)
T ss_dssp ------CEEEECCCCSSCEEEEEECSTTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------C
T ss_pred ------eeeeeecCCCCceEEEEECCCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhccccccccccccccc
Confidence 2333 557999999999987778999999999999999999877665421
Q ss_pred --eeeEEEEeeCCCCcEEEEec-CCCcEEEEeC--CCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEE-eC------C
Q 036314 227 --KALNCIDIGGEGSALIAAGG-SDPILRIWDP--RKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA-SY------D 294 (347)
Q Consensus 227 --~~~~~~~~~~~~~~~la~~~-~d~~i~iwd~--~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~-s~------D 294 (347)
..+..+.+.+++ .++++++ .|+.|++||+ ........+..+..| ..|.+++|+|++ ++++. +. +
T Consensus 306 ~~~~v~~i~~~~~~-~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~--~~v~~~~~~~~~~~~ 381 (450)
T 2vdu_B 306 IEFAVSKIIKSKNL-PFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDE--FQVTLDNKESSGVQK 381 (450)
T ss_dssp BCCCEEEEEECSSS-SEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTE--EEEEECCTTCCSSCC
T ss_pred ceEEEEEEEEeCCC-CEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCc--EEEEEecccCCCCCC
Confidence 246678887654 4566665 8999999999 332222345667777 789999999953 34444 33 4
Q ss_pred CcEEEEEcCC
Q 036314 295 GKVMLWDLRT 304 (347)
Q Consensus 295 ~~i~lwd~~~ 304 (347)
..|++|.++.
T Consensus 382 ~~i~v~~~~~ 391 (450)
T 2vdu_B 382 NFAKFIEYNL 391 (450)
T ss_dssp CSEEEEEEET
T ss_pred cceEEEEEEc
Confidence 5589998754
No 124
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=1e-28 Score=215.02 Aligned_cols=211 Identities=15% Similarity=0.094 Sum_probs=147.3
Q ss_pred CcCCceeeccCCCC-----CEEEEEe--------------------cCCeEEEEcC-C-CeEEEEeeccCCceEEEEEee
Q 036314 22 LHDDWVSAVDGSNP-----GFILTGC--------------------YDNLGRVWKA-G-GVCTHILEGHCGAVSSVNIIK 74 (347)
Q Consensus 22 ~h~~~v~~~~~~~~-----~~l~sg~--------------------~d~~i~iw~~-~-~~~~~~l~~h~~~V~~v~~~~ 74 (347)
.|...|++++++++ ++++++| .|++|++|++ + |..+..+.+|...+..++|++
T Consensus 109 ~~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~ 188 (356)
T 2w18_A 109 LEIREIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAE 188 (356)
T ss_dssp SSEEEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEE
T ss_pred ccccceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeec
Confidence 35566777776633 3555544 3999999996 3 777888889999999999988
Q ss_pred cCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccc---cceEEEEEeCCCCEEEEeeCCCcEEEEecCCC
Q 036314 75 SDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHK---ASVHSIAAETSGNMVCSGSWDCTISLWRTNDS 151 (347)
Q Consensus 75 ~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~---~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~ 151 (347)
..+ +...|+++|.|++||+||+.+++ +++++.+|. ..+.+++|+|+|+++++++.+.. +|
T Consensus 189 ~~g-~~~~LaSgS~D~TIkIWDl~TGk---------~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~--~w----- 251 (356)
T 2w18_A 189 VQG-MQEALLGTTIMNNIVIWNLKTGQ---------LLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCA--KE----- 251 (356)
T ss_dssp EET-STTEEEEEETTSEEEEEETTTCC---------EEEEEECCC---CCCEEEEEEETTEEEEEEC-------------
T ss_pred cCC-CCceEEEecCCCcEEEEECCCCc---------EEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCC--cc-----
Confidence 322 23479999999999999998875 455666543 46778899999999988775533 23
Q ss_pred CCCCccceeeeccCCCccccccccccccccccCCccceEEEEeCCCCeEEEEecCCcEEEEECCCCceeeeee----eCe
Q 036314 152 DAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIF----CGK 227 (347)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~----~~~ 227 (347)
.+++|+.|++|++||..+++.+..+. .++
T Consensus 252 -----------------------------------------------~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh 284 (356)
T 2w18_A 252 -----------------------------------------------SESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQ 284 (356)
T ss_dssp -----------------------------------------------------CCEEEEEEETTTTEEEEEEEECCCTTC
T ss_pred -----------------------------------------------eeeccCCCcEEEEEECCCCEEEEEEEeeccCCC
Confidence 24688899999999998887665432 121
Q ss_pred e--eEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCee-EEEeCCCCCeEEEEEeCCCcEEEEEcC
Q 036314 228 A--LNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWIS-ACKWHNKSWFHLISASYDGKVMLWDLR 303 (347)
Q Consensus 228 ~--~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~-~v~~s~~~~~~l~s~s~D~~i~lwd~~ 303 (347)
. ..+.++. +.++|+++.|++|+|||+... ..+.++.+|.+.+. +++|+|++. +|+||+.|++|||||+.
T Consensus 285 ~~~~lsg~~s---g~~lASgS~DgTIkIWDl~tG---k~l~tL~gH~~~vvs~vafSPDG~-~LaSGS~D~TIklWd~~ 356 (356)
T 2w18_A 285 AGRFLEGDVK---DHCAAAILTSGTIAIWDLLLG---QCTALLPPVSDQHWSFVKWSGTDS-HLLAGQKDGNIFVYHYS 356 (356)
T ss_dssp CCCEEEEEEE---TTEEEEEETTSCEEEEETTTC---SEEEEECCC--CCCCEEEECSSSS-EEEEECTTSCEEEEEEC
T ss_pred cceeEccccC---CCEEEEEcCCCcEEEEECCCC---cEEEEecCCCCCeEEEEEECCCCC-EEEEEECCCcEEEecCC
Confidence 1 2222222 347899999999999999753 34778889988765 589999986 59999999999999963
No 125
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.96 E-value=2.1e-26 Score=208.67 Aligned_cols=275 Identities=12% Similarity=0.023 Sum_probs=202.9
Q ss_pred CceeeccCCC-CCEE-EEEecCCeEEEEcC-CCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccc
Q 036314 25 DWVSAVDGSN-PGFI-LTGCYDNLGRVWKA-GGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEE 101 (347)
Q Consensus 25 ~~v~~~~~~~-~~~l-~sg~~d~~i~iw~~-~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~ 101 (347)
..+.++++++ +.+| ++++.|++|++||. .++++..+..|. .+.+++|+|++. ..+++++.|++|++||+.+++
T Consensus 32 ~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~---~l~~~~~~~~~v~v~d~~~~~ 107 (391)
T 1l0q_A 32 SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGK---QVYVTNMASSTLSVIDTTSNT 107 (391)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSS---EEEEEETTTTEEEEEETTTTE
T ss_pred CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCC---EEEEEECCCCEEEEEECCCCe
Confidence 4588999884 5555 78889999999997 467777777665 799999998543 244677788999999998764
Q ss_pred cccCccccceeeeeeccccceEEEEEeCCCCEE-EEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccc
Q 036314 102 LVNHPKKIRSFKILRGHKASVHSIAAETSGNMV-CSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAIS 180 (347)
Q Consensus 102 ~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l-~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (347)
. ...+.. ...+.+++|+|+++.+ ++++.|+.|++||+.+.. .+.
T Consensus 108 ~---------~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~-------------------------~~~ 152 (391)
T 1l0q_A 108 V---------AGTVKT-GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKA-------------------------VIN 152 (391)
T ss_dssp E---------EEEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE-------------------------EEE
T ss_pred E---------EEEEeC-CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCc-------------------------EEE
Confidence 2 333444 4568999999999977 788899999999987532 222
Q ss_pred cccCCccceEEEEe-CCCCeE-EEEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEec--CCCcEEEEeC
Q 036314 181 TLVGHTQCVSSVVW-PQQETI-YSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGG--SDPILRIWDP 256 (347)
Q Consensus 181 ~~~~h~~~v~~~~~-~~~~~l-~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~--~d~~i~iwd~ 256 (347)
.+..| ..+..+.| ++++.+ ++++.|+.|++||+++++....+.....+.++++++++..+++++. .++.|++||+
T Consensus 153 ~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~ 231 (391)
T 1l0q_A 153 TVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDT 231 (391)
T ss_dssp EEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEET
T ss_pred EEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEEC
Confidence 33333 34577777 566666 6778899999999999887777766667888999776654444433 6899999998
Q ss_pred CCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEE---------------EE
Q 036314 257 RKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVL---------------CA 321 (347)
Q Consensus 257 ~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~---------------~~ 321 (347)
+.. ..+..+..|. .+.+++|+|++.+++++++.|+.|++||+++++.+..+..|..+.. ..
T Consensus 232 ~~~---~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 307 (391)
T 1l0q_A 232 GTN---KITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAVGKNPYASGQFIGSIPVQPVYPSA 307 (391)
T ss_dssp TTT---EEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEECCSSCEEECSSCCCCCBC
T ss_pred CCC---eEEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEECCcCCCccceeeeccccccccccc
Confidence 743 2355666554 5789999999987668889999999999999988877766654421 11
Q ss_pred eec-C---C-------CEEEEccCCceEEEeec
Q 036314 322 DWW-R---G-------DSVISGGVDSKLCVSSG 343 (347)
Q Consensus 322 ~~~-~---~-------~~l~s~s~D~~v~vw~~ 343 (347)
.|+ + + -.+.+.+.|.++++|+.
T Consensus 308 ~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~ 340 (391)
T 1l0q_A 308 DFKSNITSGYIFLSEPVQFTDLSKDATEWKWDF 340 (391)
T ss_dssp CEEESCCSSEEETTCCEEEEECCBSCSEEEEEC
T ss_pred ccccccccccccccceEEEEeCCCCceEEEEEC
Confidence 222 1 1 34778888999999975
No 126
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.95 E-value=1.8e-26 Score=211.87 Aligned_cols=265 Identities=11% Similarity=0.016 Sum_probs=196.7
Q ss_pred EEecCCeEEEEc--CC-C--eEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeee
Q 036314 40 TGCYDNLGRVWK--AG-G--VCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKI 114 (347)
Q Consensus 40 sg~~d~~i~iw~--~~-~--~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~ 114 (347)
+++.|+.+++|. .. + ..+..+..+. .+.+++|+| ++ ..+++++.|++|++||+.+++.... .....
T Consensus 94 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~-~~~~~~~s~-~~---~~~~~~~~~~~i~~~d~~~g~~~~~----~~~~~ 164 (433)
T 3bws_A 94 RKPEELNEKLIALDKEGITHRFISRFKTGF-QPKSVRFID-NT---RLAIPLLEDEGMDVLDINSGQTVRL----SPPEK 164 (433)
T ss_dssp SSGGGGTTCEEECCBTTCSEEEEEEEECSS-CBCCCEESS-SS---EEEEEBTTSSSEEEEETTTCCEEEE----CCCHH
T ss_pred cccCCCceEEEEECCCCCcceEEEEEcCCC-CceEEEEeC-CC---eEEEEeCCCCeEEEEECCCCeEeee----cCccc
Confidence 344455445554 43 2 3455565554 466899988 32 4788899999999999987653211 01113
Q ss_pred eeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe
Q 036314 115 LRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW 194 (347)
Q Consensus 115 ~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 194 (347)
+.+|...|.+++|+++++++++++.|++|++||+.+. +.+..+..|...+.+++|
T Consensus 165 ~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~-------------------------~~~~~~~~~~~~~~~~~~ 219 (433)
T 3bws_A 165 YKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTL-------------------------AYKATVDLTGKWSKILLY 219 (433)
T ss_dssp HHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTC-------------------------CEEEEEECSSSSEEEEEE
T ss_pred ccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCc-------------------------eEEEEEcCCCCCeeEEEE
Confidence 4589999999999999999999999999999998753 223455567788899998
Q ss_pred -CCCCeEE-EEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEec--------CCCcEEEEeCCCCCCCCC
Q 036314 195 -PQQETIY-SASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGG--------SDPILRIWDPRKPGTSAP 264 (347)
Q Consensus 195 -~~~~~l~-s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~--------~d~~i~iwd~~~~~~~~~ 264 (347)
++++.++ +++.|+.|++||+++++.+..+.....+.++++++++. .+++++ .|+.|++||++... .
T Consensus 220 ~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~-~l~~~~~~~~~~~~~dg~i~~~d~~~~~---~ 295 (433)
T 3bws_A 220 DPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGK-ELYIAQFSASNQESGGGRLGIYSMDKEK---L 295 (433)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSS-EEEEEEEESCTTCSCCEEEEEEETTTTE---E
T ss_pred cCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCC-EEEEEECCCCccccCCCeEEEEECCCCc---E
Confidence 5677764 55589999999999988777766666788899977654 555555 58899999987431 2
Q ss_pred eEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeecC-CCEEEEccC---------
Q 036314 265 VFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGV--------- 334 (347)
Q Consensus 265 ~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~--------- 334 (347)
. ....|...+.+++|+|++..++++++.|+.|++||+++++.+..+. |...+.+++|+| |++|++++.
T Consensus 296 ~-~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~ 373 (433)
T 3bws_A 296 I-DTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEGY 373 (433)
T ss_dssp E-EEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTCT
T ss_pred E-eeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec-CCCCCCeEEEcCCCCEEEEEecCCCcccccc
Confidence 2 2234566889999999998778888999999999999887777765 667899999986 666776665
Q ss_pred ------CceEEEeecc
Q 036314 335 ------DSKLCVSSGV 344 (347)
Q Consensus 335 ------D~~v~vw~~~ 344 (347)
||.|++|+..
T Consensus 374 ~~~g~~dg~v~~~d~~ 389 (433)
T 3bws_A 374 LKKGLVLGKVYVIDTT 389 (433)
T ss_dssp TSCCSSCCEEEEEETT
T ss_pred ccccccceEEEEEECC
Confidence 5799999864
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.95 E-value=3.4e-25 Score=202.82 Aligned_cols=259 Identities=12% Similarity=0.083 Sum_probs=193.1
Q ss_pred CCCcCCceeeccCCC---------------CCEEEEEecC------CeEEEEcCCCeEEEEeeccCCceEEEEEeecCCC
Q 036314 20 PSLHDDWVSAVDGSN---------------PGFILTGCYD------NLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGL 78 (347)
Q Consensus 20 ~~~h~~~v~~~~~~~---------------~~~l~sg~~d------~~i~iw~~~~~~~~~l~~h~~~V~~v~~~~~~~~ 78 (347)
..+|...+..++++. +..++.++.+ ++|++||..+...+.+.+|...|.+++|+|++
T Consensus 113 ~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg-- 190 (415)
T 2hqs_A 113 YKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDG-- 190 (415)
T ss_dssp EEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEESSCEEEEEECTTS--
T ss_pred EEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCCCCCEEEeCCCCcceeeEEcCCC--
Confidence 446777787766441 5677777665 79999999877778889999999999999954
Q ss_pred ceEEEEEccCCC---cEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEE-EeeCCCc--EEEEecCCCC
Q 036314 79 KYVTVATASKDQ---TLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVC-SGSWDCT--ISLWRTNDSD 152 (347)
Q Consensus 79 ~~~~l~s~s~Dg---~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~-sgs~Dg~--I~iwd~~~~~ 152 (347)
..|++++.|+ +|++||+.+++. ..+..|...+.+++|+|||+.|+ +++.|+. |++||+.+..
T Consensus 191 --~~la~~s~~~~~~~i~~~d~~tg~~----------~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~ 258 (415)
T 2hqs_A 191 --SKLAYVTFESGRSALVIQTLANGAV----------RQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ 258 (415)
T ss_dssp --SEEEEEECTTSSCEEEEEETTTCCE----------EEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC
T ss_pred --CEEEEEEecCCCcEEEEEECCCCcE----------EEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCC
Confidence 3688888875 999999987642 24567888999999999999777 7777765 8889986532
Q ss_pred CCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CCCCeEEEEec-CC--cEEEEECCCCceeeeeeeCee
Q 036314 153 AAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASW-DH--SVRTWDVEMGKDLSDIFCGKA 228 (347)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~-dg--~v~vwd~~~~~~~~~~~~~~~ 228 (347)
...+..|...+.++.| |+++.|++++. ++ .|.+||+.+++..........
T Consensus 259 --------------------------~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~~~ 312 (415)
T 2hqs_A 259 --------------------------IRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQ 312 (415)
T ss_dssp --------------------------EEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSE
T ss_pred --------------------------EEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecCCCc
Confidence 2345567778888998 57788888776 45 577779887764322223456
Q ss_pred eEEEEeeCCCCcEEEEecC---CCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCC---cEEEEEc
Q 036314 229 LNCIDIGGEGSALIAAGGS---DPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDG---KVMLWDL 302 (347)
Q Consensus 229 ~~~~~~~~~~~~~la~~~~---d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~---~i~lwd~ 302 (347)
+..++|+|++. .|+.++. +..|++||+.... ...+..|. .+.+++|+|++.. |++++.|+ .|.+||+
T Consensus 313 ~~~~~~spdG~-~l~~~~~~~g~~~i~~~d~~~~~----~~~l~~~~-~~~~~~~spdg~~-l~~~s~~~~~~~l~~~d~ 385 (415)
T 2hqs_A 313 NQDADVSSDGK-FMVMVSSNGGQQHIAKQDLATGG----VQVLSSTF-LDETPSLAPNGTM-VIYSSSQGMGSVLNLVST 385 (415)
T ss_dssp EEEEEECTTSS-EEEEEEECSSCEEEEEEETTTCC----EEECCCSS-SCEEEEECTTSSE-EEEEEEETTEEEEEEEET
T ss_pred ccCeEECCCCC-EEEEEECcCCceEEEEEECCCCC----EEEecCCC-CcCCeEEcCCCCE-EEEEEcCCCccEEEEEEC
Confidence 77888977655 5555543 3589999987432 34555564 7899999999975 77777666 7999999
Q ss_pred CCCccceeecCCCCeEEEEeecCC
Q 036314 303 RTAWPLSVIDSHKDKVLCADWWRG 326 (347)
Q Consensus 303 ~~~~~~~~~~~h~~~v~~~~~~~~ 326 (347)
+ +.....+.+|.+.|.+++|+|-
T Consensus 386 ~-g~~~~~l~~~~~~v~~~~~~~~ 408 (415)
T 2hqs_A 386 D-GRFKARLPATDGQVKFPAWSPY 408 (415)
T ss_dssp T-SCCEEECCCSSSEEEEEEECCC
T ss_pred C-CCcEEEeeCCCCCCcCCccccc
Confidence 7 4567888999999999999874
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.95 E-value=3.4e-25 Score=202.84 Aligned_cols=275 Identities=12% Similarity=0.038 Sum_probs=193.8
Q ss_pred CceeeccCC-CC-CEEEEEe----cCC----eEEEEcC--C-CeEE--EEeeccCCceEEEEEeecC----------CCc
Q 036314 25 DWVSAVDGS-NP-GFILTGC----YDN----LGRVWKA--G-GVCT--HILEGHCGAVSSVNIIKSD----------GLK 79 (347)
Q Consensus 25 ~~v~~~~~~-~~-~~l~sg~----~d~----~i~iw~~--~-~~~~--~~l~~h~~~V~~v~~~~~~----------~~~ 79 (347)
..+...+++ .+ .++|+|+ .|| ++++||. . ++++ ..+.+|...+..+++.+.+ +..
T Consensus 63 ~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~ 142 (415)
T 2hqs_A 63 QEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAF 142 (415)
T ss_dssp GGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCT
T ss_pred cCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcC
Confidence 455555544 33 5788887 457 9999998 4 5655 5588998888777665310 000
Q ss_pred eEEEEEccCC------CcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCC---cEEEEecCC
Q 036314 80 YVTVATASKD------QTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDC---TISLWRTND 150 (347)
Q Consensus 80 ~~~l~s~s~D------g~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg---~I~iwd~~~ 150 (347)
...++.++.+ ++|++||++.. ....+.+|...|.+++|+|||+.|++++.|+ +|++||+.+
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~----------~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~t 212 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGY----------NQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLAN 212 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSC----------SCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTT
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCC----------CCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCC
Confidence 1235555543 79999998743 2345678999999999999999999999886 999999876
Q ss_pred CCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CCCCeEE-EEecCCc--EEEEECCCCceeeeeeeC
Q 036314 151 SDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIY-SASWDHS--VRTWDVEMGKDLSDIFCG 226 (347)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~-s~s~dg~--v~vwd~~~~~~~~~~~~~ 226 (347)
+. ...+..|...+.+++| |+++.|+ +++.|+. |.+||+++++........
T Consensus 213 g~--------------------------~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~ 266 (415)
T 2hqs_A 213 GA--------------------------VRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGR 266 (415)
T ss_dssp CC--------------------------EEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCS
T ss_pred Cc--------------------------EEEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCC
Confidence 42 1234456677889998 5777776 6666665 899999887653322234
Q ss_pred eeeEEEEeeCCCCcEEEEecC-CC--cEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCC---CcEEEE
Q 036314 227 KALNCIDIGGEGSALIAAGGS-DP--ILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYD---GKVMLW 300 (347)
Q Consensus 227 ~~~~~~~~~~~~~~~la~~~~-d~--~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D---~~i~lw 300 (347)
..+.++.|+|++. .|+.++. ++ .|.+||+.... ...+..|...+.+++|+|++.+ |++++.+ ..|.+|
T Consensus 267 ~~~~~~~~spdg~-~l~~~s~~~g~~~i~~~d~~~~~----~~~l~~~~~~~~~~~~spdG~~-l~~~~~~~g~~~i~~~ 340 (415)
T 2hqs_A 267 SNNTEPTWFPDSQ-NLAFTSDQAGRPQVYKVNINGGA----PQRITWEGSQNQDADVSSDGKF-MVMVSSNGGQQHIAKQ 340 (415)
T ss_dssp SCEEEEEECTTSS-EEEEEECTTSSCEEEEEETTSSC----CEECCCSSSEEEEEEECTTSSE-EEEEEECSSCEEEEEE
T ss_pred CcccceEECCCCC-EEEEEECCCCCcEEEEEECCCCC----EEEEecCCCcccCeEECCCCCE-EEEEECcCCceEEEEE
Confidence 4678889977655 4555444 55 67777876421 3455567788999999999975 6666543 589999
Q ss_pred EcCCCccceeecCCCCeEEEEeecC-CCEEEEccCCc---eEEEeec
Q 036314 301 DLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGVDS---KLCVSSG 343 (347)
Q Consensus 301 d~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~D~---~v~vw~~ 343 (347)
|+++++. ..+..|. .+.++.|+| |++|+.++.|+ .|.+|+.
T Consensus 341 d~~~~~~-~~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~ 385 (415)
T 2hqs_A 341 DLATGGV-QVLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVST 385 (415)
T ss_dssp ETTTCCE-EECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEET
T ss_pred ECCCCCE-EEecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEEC
Confidence 9998764 4566664 889999985 77788888777 7888874
No 129
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.93 E-value=1.1e-23 Score=198.83 Aligned_cols=279 Identities=10% Similarity=0.044 Sum_probs=198.7
Q ss_pred CC-CCCEEEEEecCCeEEEEcCC-CeEEEEee-ccCCceEEEEEeecCCCceEEEEEccCCCcEEEEec--cccccccCc
Q 036314 32 GS-NPGFILTGCYDNLGRVWKAG-GVCTHILE-GHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKF--DAEELVNHP 106 (347)
Q Consensus 32 ~~-~~~~l~sg~~d~~i~iw~~~-~~~~~~l~-~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~--~~~~~~~~~ 106 (347)
++ ++.++++++.|++|++||.. ++++..+. +|. +..++|+|++ .+|++++.|++|++||+ .+++
T Consensus 145 ~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~--~~~v~~spdg----~~l~v~~~d~~V~v~D~~~~t~~----- 213 (543)
T 1nir_A 145 LDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA--VHISRMSASG----RYLLVIGRDARIDMIDLWAKEPT----- 213 (543)
T ss_dssp CCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT--EEEEEECTTS----CEEEEEETTSEEEEEETTSSSCE-----
T ss_pred cCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc--cceEEECCCC----CEEEEECCCCeEEEEECcCCCCc-----
Confidence 44 34588899999999999974 67888887 444 8899999954 47899999999999999 5443
Q ss_pred cccceeeeeeccccceEEEEEeC----CCCEEEEeeC-CCcEEEEecCCCCCCCccceeeeccCCCcccccccccccccc
Q 036314 107 KKIRSFKILRGHKASVHSIAAET----SGNMVCSGSW-DCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAIST 181 (347)
Q Consensus 107 ~~~~~~~~~~~h~~~V~~v~~s~----~~~~l~sgs~-Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (347)
.+.++. +...+..++|+| ||+++++++. +++|.+||..+.+...... . .+.....
T Consensus 214 ----~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~----~-----------~g~~~~~ 273 (543)
T 1nir_A 214 ----KVAEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVS----T-----------RGMTVDT 273 (543)
T ss_dssp ----EEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEE----C-----------CEECSSS
T ss_pred ----EEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeec----c-----------cCcccCc
Confidence 344555 345679999999 9999998884 8999999987643211000 0 0000000
Q ss_pred ccCCcc-ceEEEEeC-CCC-eEEEEecCCcEEEEECCCCceee--eeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeC
Q 036314 182 LVGHTQ-CVSSVVWP-QQE-TIYSASWDHSVRTWDVEMGKDLS--DIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDP 256 (347)
Q Consensus 182 ~~~h~~-~v~~~~~~-~~~-~l~s~s~dg~v~vwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~ 256 (347)
...|.. .+..+.++ ++. .+++...+++|.+||+.+.+.+. .+.....+..+.|+|++..+++++..+++|.+||+
T Consensus 274 ~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~ 353 (543)
T 1nir_A 274 QTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDS 353 (543)
T ss_dssp CCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEET
T ss_pred cccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEEC
Confidence 001222 56777764 444 46788889999999998765443 33334456678888877666777777999999998
Q ss_pred CCCCCCCCeEEecC----CCCCeeEEEeCCCCCeEEEEEe-CCCcEEEEEcCC-------CccceeecCCCCeEEEEeec
Q 036314 257 RKPGTSAPVFQFSS----HNSWISACKWHNKSWFHLISAS-YDGKVMLWDLRT-------AWPLSVIDSHKDKVLCADWW 324 (347)
Q Consensus 257 ~~~~~~~~~~~~~~----h~~~v~~v~~s~~~~~~l~s~s-~D~~i~lwd~~~-------~~~~~~~~~h~~~v~~~~~~ 324 (347)
... .....+.. |......+ ++|++...++|++ .|++|.|||+.+ ++.++++.+|.+.++.+.|+
T Consensus 354 ~tg---~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~ 429 (543)
T 1nir_A 354 KDR---RLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTH 429 (543)
T ss_dssp TTT---EEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECC
T ss_pred CCC---eEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcC
Confidence 753 22344442 65544443 4677666778876 689999999988 78889999998888999998
Q ss_pred C-CCEEEEcc-------CCceEEEeeccc
Q 036314 325 R-GDSVISGG-------VDSKLCVSSGVS 345 (347)
Q Consensus 325 ~-~~~l~s~s-------~D~~v~vw~~~~ 345 (347)
| +++|.+++ .+++|.||+..+
T Consensus 430 pdg~~l~v~~~~~~~~~~~~~v~v~d~~~ 458 (543)
T 1nir_A 430 PKSSHLYVDTTFNPDARISQSVAVFDLKN 458 (543)
T ss_dssp TTCCEEEECCTTCSSHHHHTCEEEEETTC
T ss_pred CCCCcEEEecCCCCCcccCceEEEEECCC
Confidence 6 67788876 378999999763
No 130
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.93 E-value=9.4e-23 Score=192.55 Aligned_cols=279 Identities=15% Similarity=0.099 Sum_probs=200.3
Q ss_pred eeeccCC-CCCEEEEEecCCeEEEEcC--C-CeEEEEeeccCCceEEEEEee----cCCCceEEEEEcc-CCCcEEEEec
Q 036314 27 VSAVDGS-NPGFILTGCYDNLGRVWKA--G-GVCTHILEGHCGAVSSVNIIK----SDGLKYVTVATAS-KDQTLRLWKF 97 (347)
Q Consensus 27 v~~~~~~-~~~~l~sg~~d~~i~iw~~--~-~~~~~~l~~h~~~V~~v~~~~----~~~~~~~~l~s~s-~Dg~v~~wd~ 97 (347)
+..++++ ++++|++++.|++|++||. . +.++..+.. ...+.+++|+| ++. +|++++ .+++|++||.
T Consensus 181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~-g~~p~~va~sp~~~~dg~----~l~v~~~~~~~v~v~D~ 255 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI-GIEARSVESSKFKGYEDR----YTIAGAYWPPQFAIMDG 255 (543)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC-CSEEEEEEECCSTTCTTT----EEEEEEEESSEEEEEET
T ss_pred cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec-CCCcceEEeCCCcCCCCC----EEEEEEccCCeEEEEec
Confidence 7788888 5679999999999999998 3 667777774 45579999998 654 466666 5899999998
Q ss_pred cccccccCccccceeeeeec----------c-ccceEEEEEeCCCC-EEEEeeCCCcEEEEecCCCCCCCccceeeeccC
Q 036314 98 DAEELVNHPKKIRSFKILRG----------H-KASVHSIAAETSGN-MVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKG 165 (347)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~----------h-~~~V~~v~~s~~~~-~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~ 165 (347)
.+.++ ++++.. | ...+.++.+++++. ++++...+++|.+||..+.....
T Consensus 256 ~t~~~---------~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~---------- 316 (543)
T 1nir_A 256 ETLEP---------KQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLT---------- 316 (543)
T ss_dssp TTCCE---------EEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCE----------
T ss_pred ccccc---------ceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcce----------
Confidence 76653 223322 2 33688999999875 56778889999999987642110
Q ss_pred CCccccccccccccccccCCccceEEEEe-CCCCeEEEE-ecCCcEEEEECCCCceeeeeeeC---eeeEEEE-eeCCCC
Q 036314 166 NNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSA-SWDHSVRTWDVEMGKDLSDIFCG---KALNCID-IGGEGS 239 (347)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~-s~dg~v~vwd~~~~~~~~~~~~~---~~~~~~~-~~~~~~ 239 (347)
+..+ .+...+..+.| |++++++++ ..+++|++||+++++.+..+..+ ++-.... ++++++
T Consensus 317 -------------~~~i-~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g 382 (543)
T 1nir_A 317 -------------VTSI-GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYG 382 (543)
T ss_dssp -------------EEEE-ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTE
T ss_pred -------------eEEe-ccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCc
Confidence 0011 13344556777 577776654 56899999999999887766532 1111112 345556
Q ss_pred cEEEEec-CCCcEEEEeCCCCCC----CCCeEEecCCCCCeeEEEeCCCCCeEEEEEe-------CCCcEEEEEcCCCcc
Q 036314 240 ALIAAGG-SDPILRIWDPRKPGT----SAPVFQFSSHNSWISACKWHNKSWFHLISAS-------YDGKVMLWDLRTAWP 307 (347)
Q Consensus 240 ~~la~~~-~d~~i~iwd~~~~~~----~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s-------~D~~i~lwd~~~~~~ 307 (347)
.+++++. .|++|.+||+...+. .+.+.++.+|...+..++++|++.+ |++++ .+++|.|||+.+++.
T Consensus 383 ~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~-l~v~~~~~~~~~~~~~v~v~d~~~~~~ 461 (543)
T 1nir_A 383 PVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSH-LYVDTTFNPDARISQSVAVFDLKNLDA 461 (543)
T ss_dssp EEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCE-EEECCTTCSSHHHHTCEEEEETTCTTS
T ss_pred cEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCc-EEEecCCCCCcccCceEEEEECCCCCC
Confidence 6777775 689999999875221 3457888999988899999999975 77776 277999999999877
Q ss_pred c-eee--------cCCCCeEEEEeecC-CCEEEEc-----cCCceEEEeecc
Q 036314 308 L-SVI--------DSHKDKVLCADWWR-GDSVISG-----GVDSKLCVSSGV 344 (347)
Q Consensus 308 ~-~~~--------~~h~~~v~~~~~~~-~~~l~s~-----s~D~~v~vw~~~ 344 (347)
. ..+ ..|...++.++|++ |+.|..+ +.|++|.||+.-
T Consensus 462 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~ 513 (543)
T 1nir_A 462 KYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDK 513 (543)
T ss_dssp CCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETT
T ss_pred CeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECC
Confidence 6 443 35678899999985 7765543 358999999865
No 131
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.92 E-value=6.4e-23 Score=181.78 Aligned_cols=270 Identities=11% Similarity=0.148 Sum_probs=178.3
Q ss_pred EEEEEecCCeEEEEcCC--CeE-EEEeeccCCceEEEEEeecCCCceEEEEEccCC-CcEEEEecc--ccccccCccccc
Q 036314 37 FILTGCYDNLGRVWKAG--GVC-THILEGHCGAVSSVNIIKSDGLKYVTVATASKD-QTLRLWKFD--AEELVNHPKKIR 110 (347)
Q Consensus 37 ~l~sg~~d~~i~iw~~~--~~~-~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~D-g~v~~wd~~--~~~~~~~~~~~~ 110 (347)
++++++.|+.|++|+.. +.. ......|...+.+++|+|++. .|++++.+ +.|++|+++ +++ .+
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~----~l~~~~~~~~~v~~~~~~~~~~~-------~~ 75 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKR----YLYVGVRPEFRVLAYRIAPDDGA-------LT 75 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSS----EEEEEETTTTEEEEEEECTTTCC-------EE
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCC----EEEEeecCCCeEEEEEecCCCCc-------ee
Confidence 45566889999999874 432 222345777889999998543 46666665 999999987 332 12
Q ss_pred eeeeeeccccceEEEEEeCCCCEEEEeeC-CCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccce
Q 036314 111 SFKILRGHKASVHSIAAETSGNMVCSGSW-DCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCV 189 (347)
Q Consensus 111 ~~~~~~~h~~~V~~v~~s~~~~~l~sgs~-Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 189 (347)
.+..+..+. .+..++|+|+++++++++. ++.|++||+.++.. ......+..+ ..+
T Consensus 76 ~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~----------------------~~~~~~~~~~-~~~ 131 (343)
T 1ri6_A 76 FAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLP----------------------VGVVDVVEGL-DGC 131 (343)
T ss_dssp EEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEE----------------------EEEEEEECCC-TTB
T ss_pred eccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCcc----------------------ccccccccCC-CCc
Confidence 333444444 7889999999997766654 88999999852110 0111122222 235
Q ss_pred EEEEe-CCCCeEEEEe-cCCcEEEEECCC-Cceee----eee--eCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCC
Q 036314 190 SSVVW-PQQETIYSAS-WDHSVRTWDVEM-GKDLS----DIF--CGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPG 260 (347)
Q Consensus 190 ~~~~~-~~~~~l~s~s-~dg~v~vwd~~~-~~~~~----~~~--~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~ 260 (347)
.+++| ++++.+++++ .++.|.+||+.+ ++... .+. .+..+..+++++++..+++++..++.|++||+....
T Consensus 132 ~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~ 211 (343)
T 1ri6_A 132 HSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPH 211 (343)
T ss_dssp CCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTT
T ss_pred eEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCC
Confidence 56666 5677777776 899999999987 54321 111 233567788987766566677789999999986321
Q ss_pred -CCCCeEEec----CC--CCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCC--C--ccceeecCCCCeEEEEeecC-CCE
Q 036314 261 -TSAPVFQFS----SH--NSWISACKWHNKSWFHLISASYDGKVMLWDLRT--A--WPLSVIDSHKDKVLCADWWR-GDS 328 (347)
Q Consensus 261 -~~~~~~~~~----~h--~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~--~--~~~~~~~~h~~~v~~~~~~~-~~~ 328 (347)
.......+. ++ ...+..++|+|++.++++++..|+.|++||++. + +.+..+..+.. +.+++|++ |++
T Consensus 212 g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~ 290 (343)
T 1ri6_A 212 GNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKY 290 (343)
T ss_dssp SCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSE
T ss_pred CcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCE
Confidence 111122221 11 235678999999987666777899999999982 2 33444544444 88899975 666
Q ss_pred EEEcc-CCceEEEee
Q 036314 329 VISGG-VDSKLCVSS 342 (347)
Q Consensus 329 l~s~s-~D~~v~vw~ 342 (347)
|++++ .|+.|.||+
T Consensus 291 l~~~~~~~~~v~v~~ 305 (343)
T 1ri6_A 291 LIAAGQKSHHISVYE 305 (343)
T ss_dssp EEEECTTTCEEEEEE
T ss_pred EEEecCCCCeEEEEE
Confidence 66655 689999994
No 132
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.92 E-value=3e-23 Score=179.62 Aligned_cols=255 Identities=11% Similarity=0.051 Sum_probs=178.3
Q ss_pred EEEecCCeEEEEcCCCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccc-cccccCccccceeeeeec
Q 036314 39 LTGCYDNLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDA-EELVNHPKKIRSFKILRG 117 (347)
Q Consensus 39 ~sg~~d~~i~iw~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~-~~~~~~~~~~~~~~~~~~ 117 (347)
.+++.|++|++||..+.....+..|.+.|.+++|+|++. .|++++ ++.|++||+.+ ++. ...+.+
T Consensus 16 ~~~~~~~~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg~----~l~~~~-~~~i~~~d~~~~~~~---------~~~~~~ 81 (297)
T 2ojh_A 16 PGGSMRSSIEIFNIRTRKMRVVWQTPELFEAPNWSPDGK----YLLLNS-EGLLYRLSLAGDPSP---------EKVDTG 81 (297)
T ss_dssp --CCCCEEEEEEETTTTEEEEEEEESSCCEEEEECTTSS----EEEEEE-TTEEEEEESSSCCSC---------EECCCT
T ss_pred CCCCcceeEEEEeCCCCceeeeccCCcceEeeEECCCCC----EEEEEc-CCeEEEEeCCCCCCc---------eEeccc
Confidence 356789999999987555556778999999999999543 577765 78999999987 542 223334
Q ss_pred c-ccceEEEEEeCCCCEEEEee--CCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe
Q 036314 118 H-KASVHSIAAETSGNMVCSGS--WDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW 194 (347)
Q Consensus 118 h-~~~V~~v~~s~~~~~l~sgs--~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 194 (347)
| ...+.+++|+|++++|++++ .++.++||.+.... .....+..+. .+..+.|
T Consensus 82 ~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~------------------------~~~~~~~~~~-~~~~~~~ 136 (297)
T 2ojh_A 82 FATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTG------------------------GTPRLMTKNL-PSYWHGW 136 (297)
T ss_dssp TCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTC------------------------CCCEECCSSS-SEEEEEE
T ss_pred cccccccceEECCCCCEEEEEEeCCCCcceEEEEECCC------------------------CceEEeecCC-CccceEE
Confidence 4 46788999999999999988 44677777653211 0011222222 3677777
Q ss_pred -CCCCeEE-EEecCCcEEEEECC--CCceeeeee-eCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEec
Q 036314 195 -PQQETIY-SASWDHSVRTWDVE--MGKDLSDIF-CGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFS 269 (347)
Q Consensus 195 -~~~~~l~-s~s~dg~v~vwd~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~ 269 (347)
|+++.|+ +++.|+.++||++. ++.. ..+. ....+.++.+++++..+++++..++.+++|++.... .....+.
T Consensus 137 spdg~~l~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~--~~~~~~~ 213 (297)
T 2ojh_A 137 SPDGKSFTYCGIRDQVFDIYSMDIDSGVE-TRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDG--SSVERIT 213 (297)
T ss_dssp CTTSSEEEEEEEETTEEEEEEEETTTCCE-EECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTS--SCEEECC
T ss_pred CCCCCEEEEEECCCCceEEEEEECCCCcc-eEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCC--CCcEEEe
Confidence 5777765 78889999999863 3333 3332 334678889987665555555568999999876322 2356777
Q ss_pred CCCCCeeEEEeCCCCCeEEEEEeCC-----------CcEEEEEcCCCccc--eeecCCCCeEEEEeecC-CCEEEEccCC
Q 036314 270 SHNSWISACKWHNKSWFHLISASYD-----------GKVMLWDLRTAWPL--SVIDSHKDKVLCADWWR-GDSVISGGVD 335 (347)
Q Consensus 270 ~h~~~v~~v~~s~~~~~~l~s~s~D-----------~~i~lwd~~~~~~~--~~~~~h~~~v~~~~~~~-~~~l~s~s~D 335 (347)
.|...+.++.|+|++.+ |+.++.+ +.|.+||+++++.. ..+.+|...+.++.|+| |++|++++.|
T Consensus 214 ~~~~~~~~~~~s~dg~~-l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 292 (297)
T 2ojh_A 214 DSAYGDWFPHPSPSGDK-VVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYF 292 (297)
T ss_dssp CCSEEEEEEEECTTSSE-EEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEEC
T ss_pred cCCcccCCeEECCCCCE-EEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEec
Confidence 78888999999999975 6666654 56999999887653 33447888899999985 7778777755
Q ss_pred c
Q 036314 336 S 336 (347)
Q Consensus 336 ~ 336 (347)
.
T Consensus 293 ~ 293 (297)
T 2ojh_A 293 P 293 (297)
T ss_dssp C
T ss_pred c
Confidence 3
No 133
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.91 E-value=9.3e-22 Score=173.94 Aligned_cols=271 Identities=11% Similarity=-0.002 Sum_probs=183.1
Q ss_pred CCEEEEEecCCeEEEEcCC-CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceee
Q 036314 35 PGFILTGCYDNLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFK 113 (347)
Q Consensus 35 ~~~l~sg~~d~~i~iw~~~-~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~ 113 (347)
+..+++.+.+++|++||.. ++....+..+...+ .++|+|++. ..++++..++.|.+||+.+++. ...
T Consensus 10 ~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~---~l~~~~~~~~~i~~~d~~~~~~--------~~~ 77 (331)
T 3u4y_A 10 NFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCS---NVVVTSDFCQTLVQIETQLEPP--------KVV 77 (331)
T ss_dssp CEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSC---EEEEEESTTCEEEEEECSSSSC--------EEE
T ss_pred CEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCC---EEEEEeCCCCeEEEEECCCCce--------eEE
Confidence 3468899999999999975 66666666666666 999998543 2445555589999999987642 133
Q ss_pred eeeccccceEEEEEeCCCCEEEEeeCCC---cEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceE
Q 036314 114 ILRGHKASVHSIAAETSGNMVCSGSWDC---TISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVS 190 (347)
Q Consensus 114 ~~~~h~~~V~~v~~s~~~~~l~sgs~Dg---~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 190 (347)
.+..+..+..+++|+|+|++++++..++ .|++||+.+.. .+..+..+ ....
T Consensus 78 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~-------------------------~~~~~~~~-~~~~ 131 (331)
T 3u4y_A 78 AIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNK-------------------------FISTIPIP-YDAV 131 (331)
T ss_dssp EEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTE-------------------------EEEEEECC-TTEE
T ss_pred ecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCC-------------------------eEEEEECC-CCcc
Confidence 4556666666699999999998655553 89999987532 11222222 2346
Q ss_pred EEEe-CCCCeEEEE-ecCCc-EEEEECCCCceee-----eeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCC
Q 036314 191 SVVW-PQQETIYSA-SWDHS-VRTWDVEMGKDLS-----DIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTS 262 (347)
Q Consensus 191 ~~~~-~~~~~l~s~-s~dg~-v~vwd~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~ 262 (347)
+++| |++++++.+ ..++. +.+|++.....+. .+........+.+++++..+++++..++.|++||+......
T Consensus 132 ~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~ 211 (331)
T 3u4y_A 132 GIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENI 211 (331)
T ss_dssp EEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSC
T ss_pred ceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCccc
Confidence 7777 567655544 55588 9999987543321 12223456788898776657777778999999998743221
Q ss_pred CCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCcc--ceeecCC----CCeE---EEEeecC-CCEE-EE
Q 036314 263 APVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWP--LSVIDSH----KDKV---LCADWWR-GDSV-IS 331 (347)
Q Consensus 263 ~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~--~~~~~~h----~~~v---~~~~~~~-~~~l-~s 331 (347)
..+..+.. ...+..++|+|++.+++++...++.|.+||+.+++. +..+..+ .... .+++|+| |++| ++
T Consensus 212 ~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~ 290 (331)
T 3u4y_A 212 TLLNAVGT-NNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFIS 290 (331)
T ss_dssp EEEEEEEC-SSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEE
T ss_pred ceeeeccC-CCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEe
Confidence 11445543 456788999999986566666788999999998765 3333222 2222 3478975 6665 56
Q ss_pred ccCCceEEEeecc
Q 036314 332 GGVDSKLCVSSGV 344 (347)
Q Consensus 332 ~s~D~~v~vw~~~ 344 (347)
+..+++|.||+..
T Consensus 291 ~~~~~~v~v~d~~ 303 (331)
T 3u4y_A 291 ANISRELKVFTIS 303 (331)
T ss_dssp ETTTTEEEEEETT
T ss_pred cCCCCcEEEEEec
Confidence 6667899999864
No 134
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.90 E-value=7.1e-22 Score=193.63 Aligned_cols=292 Identities=9% Similarity=-0.009 Sum_probs=191.5
Q ss_pred CCceeeccCC-CCCEEEEEec-CC-----eEEEEcCC-CeEEEEeeccCC------------------------ceEEEE
Q 036314 24 DDWVSAVDGS-NPGFILTGCY-DN-----LGRVWKAG-GVCTHILEGHCG------------------------AVSSVN 71 (347)
Q Consensus 24 ~~~v~~~~~~-~~~~l~sg~~-d~-----~i~iw~~~-~~~~~~l~~h~~------------------------~V~~v~ 71 (347)
...+.+++++ ++++|++++. |+ +|++||.. +.....+..|.. .|.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 4568899998 5679999998 88 99999975 555556655543 378899
Q ss_pred EeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCC
Q 036314 72 IIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDS 151 (347)
Q Consensus 72 ~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~ 151 (347)
|+|++ ..|++++. ++|++||+.+++. + ....+..|...+.+++|+|||++|+.++ ++.|++||+.++
T Consensus 116 ~SpDg----~~l~~~~~-~~i~~~d~~~~~~---~----~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g 182 (741)
T 2ecf_A 116 WSPDA----QRLLFPLG-GELYLYDLKQEGK---A----AVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASG 182 (741)
T ss_dssp ECTTS----SEEEEEET-TEEEEEESSSCST---T----SCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTT
T ss_pred ECCCC----CEEEEEeC-CcEEEEECCCCCc---c----eEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCC
Confidence 99954 35777776 8999999986510 0 1123556788899999999999999887 469999998754
Q ss_pred CCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CCCCeEEEEecCC-----------------------
Q 036314 152 DAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDH----------------------- 207 (347)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg----------------------- 207 (347)
.... ..... .... ..+............+..+.| |+++.|++++.|+
T Consensus 183 ~~~~----~~~~~-~~~~----~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~ 253 (741)
T 2ecf_A 183 RQMQ----LTADG-STTI----GNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRY 253 (741)
T ss_dssp EEEE----CCCCC-CSSE----EESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEEC
T ss_pred CEEE----eccCC-ccce----eccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeec
Confidence 2100 00000 0000 000000000000011355777 5788898888776
Q ss_pred ----------cEEEEECCC-Cceeeeee---eCeeeEEEEeeCCCCcEEEEec----CCCcEEEEeCCCCCCCCCeEEec
Q 036314 208 ----------SVRTWDVEM-GKDLSDIF---CGKALNCIDIGGEGSALIAAGG----SDPILRIWDPRKPGTSAPVFQFS 269 (347)
Q Consensus 208 ----------~v~vwd~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~la~~~----~d~~i~iwd~~~~~~~~~~~~~~ 269 (347)
.|.+||+.+ ++...... ....+..++| +++..+++++. .+..|++||+.... ....+.
T Consensus 254 ~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~---~~~~~~ 329 (741)
T 2ecf_A 254 PAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQ---QRVLAH 329 (741)
T ss_dssp CBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCC---EEEEEE
T ss_pred CCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCc---eEEEEE
Confidence 788999988 76433221 2346778899 76654443332 36789999987532 233333
Q ss_pred CCCC----CeeEEEeCCCCCeEEEEEeCCCcEEEEEcC-CCccceeecCCCCeEEEE-eecC-CCEE-EEccCCc--eEE
Q 036314 270 SHNS----WISACKWHNKSWFHLISASYDGKVMLWDLR-TAWPLSVIDSHKDKVLCA-DWWR-GDSV-ISGGVDS--KLC 339 (347)
Q Consensus 270 ~h~~----~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~-~~~~~~~~~~h~~~v~~~-~~~~-~~~l-~s~s~D~--~v~ 339 (347)
.|.. .+..++|+|++. ++++++.|+.++||.++ .+. ...+..|...|..+ .|++ |++| ++++.|+ +++
T Consensus 330 ~~~~~~~~~~~~~~~spdg~-~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~ 407 (741)
T 2ecf_A 330 ETSPTWVPLHNSLRFLDDGS-ILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQ 407 (741)
T ss_dssp EECSSCCCCCSCCEECTTSC-EEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBE
T ss_pred cCCCCcCCcCCceEECCCCe-EEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEE
Confidence 3332 346899999997 78899999999998876 344 77788888888887 4875 6565 4566666 899
Q ss_pred Eeec
Q 036314 340 VSSG 343 (347)
Q Consensus 340 vw~~ 343 (347)
||+.
T Consensus 408 l~~~ 411 (741)
T 2ecf_A 408 IYAV 411 (741)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9974
No 135
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.89 E-value=2e-21 Score=171.65 Aligned_cols=263 Identities=12% Similarity=0.087 Sum_probs=179.9
Q ss_pred CEEEEEecCCeEEEEcCC-CeEEEEee-ccCC-ceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCcccccee
Q 036314 36 GFILTGCYDNLGRVWKAG-GVCTHILE-GHCG-AVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSF 112 (347)
Q Consensus 36 ~~l~sg~~d~~i~iw~~~-~~~~~~l~-~h~~-~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~ 112 (347)
++|++++.|++|++||.. ++.+..+. ++.. .+..++|+|++. ..+++++.++.|.+||+.+++..
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~---~l~v~~~~~~~v~~~d~~~~~~~--------- 69 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGR---IAYATVNKSESLVKIDLVTGETL--------- 69 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSS---EEEEEETTTTEEEEEETTTCCEE---------
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCC---EEEEEeCCCCeEEEEECCCCCeE---------
Confidence 479999999999999975 56666555 3322 478899998543 35577788899999999776432
Q ss_pred eeee-c----cccceEEEEEeCCCCEEEEee------------CCCcEEEEecCCCCCCCccceeeeccCCCcccccccc
Q 036314 113 KILR-G----HKASVHSIAAETSGNMVCSGS------------WDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLE 175 (347)
Q Consensus 113 ~~~~-~----h~~~V~~v~~s~~~~~l~sgs------------~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (347)
..+. + |...+.+++|+|+|+++++++ .++.|.+||+.+...
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~---------------------- 127 (337)
T 1pby_B 70 GRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSR---------------------- 127 (337)
T ss_dssp EEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEE----------------------
T ss_pred eeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcE----------------------
Confidence 2222 1 223567899999999888876 579999999865321
Q ss_pred ccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCC-----
Q 036314 176 GEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDP----- 249 (347)
Q Consensus 176 ~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~----- 249 (347)
...+.. ...+..++| |++++|+++ ++.|.+||+++++....+........+.+++++..+++++..++
T Consensus 128 ---~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~ 201 (337)
T 1pby_B 128 ---RKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATP 201 (337)
T ss_dssp ---EEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEE
T ss_pred ---EEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeee
Confidence 111111 123445666 577777776 68999999998877655543221112244555444433333333
Q ss_pred ------------------cEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceee
Q 036314 250 ------------------ILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVI 311 (347)
Q Consensus 250 ------------------~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~ 311 (347)
.|.+||+.... .. ...+..+...+.+++|+|++.+ |+++ ++.|.+||+++++.+..+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~v~~~d~~~~~-~~-~~~~~~~~~~~~~~~~s~dg~~-l~~~--~~~v~~~d~~~~~~~~~~ 276 (337)
T 1pby_B 202 FYTARKDIDPADPTAYRTGLLTMDLETGE-MA-MREVRIMDVFYFSTAVNPAKTR-AFGA--YNVLESFDLEKNASIKRV 276 (337)
T ss_dssp EEEEBTTSCTTSGGGEEEEEEEEETTTCC-EE-EEEEEECSSCEEEEEECTTSSE-EEEE--ESEEEEEETTTTEEEEEE
T ss_pred eeccccccccccccccccceEEEeCCCCC-ce-EeecCCCCCceeeEEECCCCCE-EEEe--CCeEEEEECCCCcCccee
Confidence 46899987532 22 3455667778889999999975 5555 799999999988877776
Q ss_pred cCCCCeEEEEeecC-CCEEEEccCCceEEEeecc
Q 036314 312 DSHKDKVLCADWWR-GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 312 ~~h~~~v~~~~~~~-~~~l~s~s~D~~v~vw~~~ 344 (347)
..+ ..+.+++|++ |++|++++.|+.|.+|+..
T Consensus 277 ~~~-~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~ 309 (337)
T 1pby_B 277 PLP-HSYYSVNVSTDGSTVWLGGALGDLAAYDAE 309 (337)
T ss_dssp ECS-SCCCEEEECTTSCEEEEESBSSEEEEEETT
T ss_pred cCC-CceeeEEECCCCCEEEEEcCCCcEEEEECc
Confidence 543 4678899985 6778888889999999864
No 136
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.89 E-value=4.2e-21 Score=187.18 Aligned_cols=277 Identities=11% Similarity=0.085 Sum_probs=189.5
Q ss_pred CceeeccCCCCCEEEEEecCCeEEEEcCCCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccc-----
Q 036314 25 DWVSAVDGSNPGFILTGCYDNLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDA----- 99 (347)
Q Consensus 25 ~~v~~~~~~~~~~l~sg~~d~~i~iw~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~----- 99 (347)
..|.+++++++++++.+ .|+++++||..+.....+..+...+.+++|+|++. .|+. +.|++|++|++.+
T Consensus 82 ~~v~~~~~spd~~~~~~-~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~----~la~-~~~~~i~v~~~~~~~~~~ 155 (706)
T 2z3z_A 82 FPSFRTLDAGRGLVVLF-TQGGLVGFDMLARKVTYLFDTNEETASLDFSPVGD----RVAY-VRNHNLYIARGGKLGEGM 155 (706)
T ss_dssp CCCEEEEETTTTEEEEE-ETTEEEEEETTTTEEEEEECCTTCCTTCEECTTSS----EEEE-EETTEEEEEECBCTTSCC
T ss_pred cCceeEEECCCCeEEEE-ECCEEEEEECCCCceEEccCCcccccCCcCCCCCC----EEEE-EECCeEEEEecCcccccC
Confidence 56899999865766655 46999999986555556667778889999999543 5666 4789999999987
Q ss_pred cccccCccccceeeeeecccc--------------ceEEEEEeCCCCEEEEee---------------------------
Q 036314 100 EELVNHPKKIRSFKILRGHKA--------------SVHSIAAETSGNMVCSGS--------------------------- 138 (347)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~h~~--------------~V~~v~~s~~~~~l~sgs--------------------------- 138 (347)
++.. .....+.. .+.+++|+|||++|++++
T Consensus 156 g~~~---------~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~ 226 (706)
T 2z3z_A 156 SRAI---------AVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYP 226 (706)
T ss_dssp CCCE---------ESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCC
T ss_pred CCcE---------EeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCC
Confidence 5421 11122222 247899999999999887
Q ss_pred ------CCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CCCCeEEEEecCC----
Q 036314 139 ------WDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDH---- 207 (347)
Q Consensus 139 ------~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg---- 207 (347)
.+..|++||+.++.. ..+.....|...+..+.| |+++.|++++.++
T Consensus 227 ~~g~~~~~~~l~~~d~~~~~~-----------------------~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~ 283 (706)
T 2z3z_A 227 MAGTPSHHVTVGIYHLATGKT-----------------------VYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNE 283 (706)
T ss_dssp BTTSCCCEEEEEEEETTTTEE-----------------------EECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCE
T ss_pred CCCCCCCeeEEEEEECCCCce-----------------------EeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCe
Confidence 346688888764311 001111246667888998 5778888888776
Q ss_pred -cEEEEECCCCceeeeeee--Ce----eeEEEEeeC-CCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeE-E
Q 036314 208 -SVRTWDVEMGKDLSDIFC--GK----ALNCIDIGG-EGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISA-C 278 (347)
Q Consensus 208 -~v~vwd~~~~~~~~~~~~--~~----~~~~~~~~~-~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~-v 278 (347)
.|.+||+.+++....+.. .. .+..+.|++ .++.+++++..|+.++||++...+ .....+..|...+.+ +
T Consensus 284 ~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~--~~~~~l~~~~~~v~~~~ 361 (706)
T 2z3z_A 284 CKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTG--RLIRQVTKGEWEVTNFA 361 (706)
T ss_dssp EEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTS--CEEEECCCSSSCEEEEE
T ss_pred eEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCC--CEEEecCCCCeEEEeee
Confidence 899999998844443321 11 124567866 144588888889999999875222 235566777777776 7
Q ss_pred EeCCCCCeEEEEEeCCC----cEEEEEcCCCccceeecCCCCeEEEEeecC-CCEEEEccCC----ceEEEeec
Q 036314 279 KWHNKSWFHLISASYDG----KVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGVD----SKLCVSSG 343 (347)
Q Consensus 279 ~~s~~~~~~l~s~s~D~----~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~D----~~v~vw~~ 343 (347)
+|+|++..++++++.++ .|..||+++++ ...+. |...+.+++|+| |++|+....+ +.|.+|+.
T Consensus 362 ~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~l~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~ 433 (706)
T 2z3z_A 362 GFDPKGTRLYFESTEASPLERHFYCIDIKGGK-TKDLT-PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNI 433 (706)
T ss_dssp EECTTSSEEEEEESSSCTTCBEEEEEETTCCC-CEESC-CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEES
T ss_pred EEcCCCCEEEEEecCCCCceEEEEEEEcCCCC-ceecc-CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEEC
Confidence 99999987666666665 56667777665 44443 667789999985 6676654333 56999974
No 137
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.89 E-value=5.6e-20 Score=163.66 Aligned_cols=267 Identities=10% Similarity=0.015 Sum_probs=185.5
Q ss_pred cCCceeeccCC-CCCEEEEEec-------CCeEEEEcCC-CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEE
Q 036314 23 HDDWVSAVDGS-NPGFILTGCY-------DNLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLR 93 (347)
Q Consensus 23 h~~~v~~~~~~-~~~~l~sg~~-------d~~i~iw~~~-~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~ 93 (347)
....+..++++ ++++|++++. +++|.+||.. ++.+..+... ..+..++|++++. ..+++...+++|.
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~---~l~v~~~~~~~v~ 114 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHND-LKPFGATINNTTQ---TLWFGNTVNSAVT 114 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEES-SCCCSEEEETTTT---EEEEEETTTTEEE
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecC-CCcceEEECCCCC---EEEEEecCCCEEE
Confidence 34567778877 4567666663 5689999975 5566655543 4467889998654 2566777789999
Q ss_pred EEeccccccccCccccceeeeeecccc---------ceEEEEEeCCCCEEEEee--CCCcEEEEecCCCCCCCccceeee
Q 036314 94 LWKFDAEELVNHPKKIRSFKILRGHKA---------SVHSIAAETSGNMVCSGS--WDCTISLWRTNDSDAAGNQVSIKK 162 (347)
Q Consensus 94 ~wd~~~~~~~~~~~~~~~~~~~~~h~~---------~V~~v~~s~~~~~l~sgs--~Dg~I~iwd~~~~~~~~~~~~~~~ 162 (347)
+||+.+++. ...+..+.. .+.+++|+|+++.++.++ .++.|.+||..+..
T Consensus 115 ~~d~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~---------- 175 (353)
T 3vgz_A 115 AIDAKTGEV---------KGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIK---------- 175 (353)
T ss_dssp EEETTTCCE---------EEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTE----------
T ss_pred EEeCCCCee---------EEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCc----------
Confidence 999987653 223333221 268899999999777665 58899999987542
Q ss_pred ccCCCccccccccccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeeee-----CeeeEEEEeeC
Q 036314 163 RKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFC-----GKALNCIDIGG 236 (347)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~-----~~~~~~~~~~~ 236 (347)
....+..+...+.+++| ++++.++.++.++.|.+||+.+++....+.. ...+..+++++
T Consensus 176 ---------------~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 240 (353)
T 3vgz_A 176 ---------------LKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDT 240 (353)
T ss_dssp ---------------EEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEET
T ss_pred ---------------eEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECC
Confidence 12222222233445565 6788899999999999999999887766543 22356788888
Q ss_pred CCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCC
Q 036314 237 EGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKD 316 (347)
Q Consensus 237 ~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~ 316 (347)
++..++++...++.|.+||+.... ....+..+. ...++|+|++.+++++...++.|.+||.++++.+..+..+ .
T Consensus 241 dg~~l~~~~~~~~~v~~~d~~~~~---~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~-~ 314 (353)
T 3vgz_A 241 ARQRAFITDSKAAEVLVVDTRNGN---ILAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTP-T 314 (353)
T ss_dssp TTTEEEEEESSSSEEEEEETTTCC---EEEEEECSS--CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECC-S
T ss_pred CCCEEEEEeCCCCEEEEEECCCCc---EEEEEEcCC--CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecC-C
Confidence 777666666677999999986532 233443333 2568999999876777778999999999998877777653 4
Q ss_pred eEEEEeecC-CCEEEEcc
Q 036314 317 KVLCADWWR-GDSVISGG 333 (347)
Q Consensus 317 ~v~~~~~~~-~~~l~s~s 333 (347)
.+.+++|++ |++|..+.
T Consensus 315 ~~~~~~~s~dg~~l~v~~ 332 (353)
T 3vgz_A 315 HPNSLALSADGKTLYVSV 332 (353)
T ss_dssp EEEEEEECTTSCEEEEEE
T ss_pred CCCeEEEcCCCCEEEEEE
Confidence 788999985 66544433
No 138
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.88 E-value=8e-21 Score=192.96 Aligned_cols=324 Identities=10% Similarity=-0.057 Sum_probs=215.9
Q ss_pred EEeccCCCCcCCCCCcCCceeeccCC-CCCEEEEEecC------CeEEEEcCCCeEEEEeeccCCce-------EEEEEe
Q 036314 8 YIKAVAPQKEEEPSLHDDWVSAVDGS-NPGFILTGCYD------NLGRVWKAGGVCTHILEGHCGAV-------SSVNII 73 (347)
Q Consensus 8 ~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~l~sg~~d------~~i~iw~~~~~~~~~l~~h~~~V-------~~v~~~ 73 (347)
|+.++.-........|...+.++++| +|++||+++.+ .+|++|+..+...+.+.+|...+ .+++|+
T Consensus 36 ~~~~~~gg~~~~lt~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~~~~lt~~~~~~~~~~~~~~~~~~S 115 (1045)
T 1k32_A 36 WEHDLKSGSTRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRITYFSGKSTGRRMFTDVAGFD 115 (1045)
T ss_dssp EEEETTTCCEEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEECCCCCEEEETTEECSEEEEEC
T ss_pred EEEECCCCcEEEeeeCCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCCeEEcccCCCcccccccccccccCC
Confidence 44444333334456799999999998 56688887654 37999998765677899999888 899999
Q ss_pred ecCCCceEEEEEccCC------CcEEEEeccccccccCccc---------------------------------------
Q 036314 74 KSDGLKYVTVATASKD------QTLRLWKFDAEELVNHPKK--------------------------------------- 108 (347)
Q Consensus 74 ~~~~~~~~~l~s~s~D------g~v~~wd~~~~~~~~~~~~--------------------------------------- 108 (347)
|++ ..+++++.+ ..|.+|++.+++.......
T Consensus 116 pDg----~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~ 191 (1045)
T 1k32_A 116 PDG----NLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEV 191 (1045)
T ss_dssp TTC----CEEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEE
T ss_pred CCC----EEEEEECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccccccccCCCcCCEEEEC
Confidence 954 256777754 3577777766542210000
Q ss_pred -cceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccc-------e-eeeccCC-------Cccccc
Q 036314 109 -IRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQV-------S-IKKRKGN-------NQVEEP 172 (347)
Q Consensus 109 -~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~-------~-~~~~~~~-------~~~~~~ 172 (347)
......+.+|...+.++.|+++ .++++++.|++++||.+.......... . .....+. ..+...
T Consensus 192 ~~~~~~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~~~~~SpDG~~la~~~~~~i~~~ 270 (1045)
T 1k32_A 192 NSGAFKKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFTDYYPRHLNTDGRRILFSKGGSIYIF 270 (1045)
T ss_dssp ETTEEEEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCCSSCEEEEEESSSCEEEEETTEEEEE
T ss_pred CCCCeEECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCCCcceeeEcCCCCEEEEEeCCEEEEe
Confidence 0122345789999999999988 777788899999999864311000000 0 0000000 000000
Q ss_pred cccccccccccC-----------CccceEEEEe--CCCCeEEEEecCCcEEEEECCCCceeeeeeeCe-eeEEEEeeCCC
Q 036314 173 QLEGEAISTLVG-----------HTQCVSSVVW--PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGK-ALNCIDIGGEG 238 (347)
Q Consensus 173 ~~~~~~~~~~~~-----------h~~~v~~~~~--~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~-~~~~~~~~~~~ 238 (347)
......+..+.+ |...+..+.| |+++.|++++ ++.+.+|++..+.......... .+..+.|+ +
T Consensus 271 d~~~~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s--d 347 (1045)
T 1k32_A 271 NPDTEKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD--T 347 (1045)
T ss_dssp CTTTCCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEECSCCSCEEEEEECSS--S
T ss_pred cCCceEeeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEEccCCCcceEEeeeEc--C
Confidence 001111112222 3345777887 4677788777 8899999998776433222233 56778886 4
Q ss_pred CcEEEEecCCCcEE-EEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCe
Q 036314 239 SALIAAGGSDPILR-IWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDK 317 (347)
Q Consensus 239 ~~~la~~~~d~~i~-iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~ 317 (347)
+..++.++.++.+. +||+... ....+.+|...+..++|+|++. +|++++.++.|++||+++++....+.+|.+.
T Consensus 348 g~~l~~~s~~~~l~~~~d~~~~----~~~~l~~~~~~~~~~~~SpDG~-~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~ 422 (1045)
T 1k32_A 348 KVAFIHGTREGDFLGIYDYRTG----KAEKFEENLGNVFAMGVDRNGK-FAVVANDRFEIMTVDLETGKPTVIERSREAM 422 (1045)
T ss_dssp EEEEEEEETTEEEEEEEETTTC----CEEECCCCCCSEEEEEECTTSS-EEEEEETTSEEEEEETTTCCEEEEEECSSSC
T ss_pred CCeEEEEECCCceEEEEECCCC----CceEecCCccceeeeEECCCCC-EEEEECCCCeEEEEECCCCceEEeccCCCCC
Confidence 55667777788888 8897642 2344557888899999999996 5899999999999999998877777789999
Q ss_pred EEEEeecC-CCEEEEccCC----------ceEEEeecc
Q 036314 318 VLCADWWR-GDSVISGGVD----------SKLCVSSGV 344 (347)
Q Consensus 318 v~~~~~~~-~~~l~s~s~D----------~~v~vw~~~ 344 (347)
+.+++|+| |++||+++.+ +.|++|+..
T Consensus 423 v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~ 460 (1045)
T 1k32_A 423 ITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDME 460 (1045)
T ss_dssp CCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETT
T ss_pred ccceEECCCCCeEEEEecCccccccCCCCCeEEEEECC
Confidence 99999985 6778887765 499999853
No 139
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.88 E-value=4.9e-21 Score=187.65 Aligned_cols=275 Identities=7% Similarity=0.040 Sum_probs=191.1
Q ss_pred CceeeccCC-CCCEEEEEecCCeEEEEcCCCe---EEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEecccc
Q 036314 25 DWVSAVDGS-NPGFILTGCYDNLGRVWKAGGV---CTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAE 100 (347)
Q Consensus 25 ~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~~~---~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~ 100 (347)
..|..++++ ++++|++++. ++|++||..+. ....+..|...+..++|+|++. .|+.++ +++|++||+.++
T Consensus 109 ~~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~----~la~~~-~~~i~~~d~~~g 182 (741)
T 2ecf_A 109 TGIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGG----FVSFIR-GRNLWVIDLASG 182 (741)
T ss_dssp EESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSS----EEEEEE-TTEEEEEETTTT
T ss_pred cCcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCC----EEEEEe-CCcEEEEecCCC
Confidence 347888988 5568888876 99999998654 5567888888999999999543 577766 469999999876
Q ss_pred ccccCccccceeeeeecccc----------------ceEEEEEeCCCCEEEEeeCCC-----------------------
Q 036314 101 ELVNHPKKIRSFKILRGHKA----------------SVHSIAAETSGNMVCSGSWDC----------------------- 141 (347)
Q Consensus 101 ~~~~~~~~~~~~~~~~~h~~----------------~V~~v~~s~~~~~l~sgs~Dg----------------------- 141 (347)
+.. .....+.. .+.+++|+|||++|+.++.|+
T Consensus 183 ~~~---------~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~ 253 (741)
T 2ecf_A 183 RQM---------QLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRY 253 (741)
T ss_dssp EEE---------ECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEEC
T ss_pred CEE---------EeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeec
Confidence 432 11112222 147799999999999988776
Q ss_pred ----------cEEEEecCC-CCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeCCCCeEEEEec-----
Q 036314 142 ----------TISLWRTND-SDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQETIYSASW----- 205 (347)
Q Consensus 142 ----------~I~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~----- 205 (347)
.|.+||+.+ +... .+.....|...+..+.||+++.|+.++.
T Consensus 254 ~~~g~~~~~~~l~~~d~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~pDg~~l~~~~~~~~~~ 310 (741)
T 2ecf_A 254 PAAGDANVQVKLGVISPAEQAQTQ-----------------------WIDLGKEQDIYLARVNWRDPQHLSFQRQSRDQK 310 (741)
T ss_dssp CBTTSCCCEEEEEEECSSTTCCCE-----------------------EECCCSCSSEEEEEEEEEETTEEEEEEEETTSS
T ss_pred CCCCCCCCeeEEEEEECCCCCceE-----------------------EecCCCCcceEEEEEEeCCCCEEEEEEecccCC
Confidence 667777654 3210 0000114667788888877788876654
Q ss_pred CCcEEEEECCCCceeeeeeeCe-----eeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEE-E
Q 036314 206 DHSVRTWDVEMGKDLSDIFCGK-----ALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISAC-K 279 (347)
Q Consensus 206 dg~v~vwd~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v-~ 279 (347)
+..|.+||+.+++....+.... .+..+.|++++. +++++..|+.++||.+...+ . ...+..|...+.++ .
T Consensus 311 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~-~~~~~~~~g~~~l~~~~~~~--~-~~~l~~~~~~v~~~~~ 386 (741)
T 2ecf_A 311 KLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGS-ILWSSERTGFQHLYRIDSKG--K-AAALTHGNWSVDELLA 386 (741)
T ss_dssp EEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSC-EEEEECTTSSCEEEEECSSS--C-EEESCCSSSCEEEEEE
T ss_pred eEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCe-EEEEecCCCccEEEEEcCCC--C-eeeeeecceEEEeEeE
Confidence 5679999999887654443222 234678877654 88888889988888765322 2 56777787778887 5
Q ss_pred eCCCCCeEEEEEeCCC--cEEEEEcCC-CccceeecCCCCeEEEEeecC-CCEEEEccCC----ceEEEee
Q 036314 280 WHNKSWFHLISASYDG--KVMLWDLRT-AWPLSVIDSHKDKVLCADWWR-GDSVISGGVD----SKLCVSS 342 (347)
Q Consensus 280 ~s~~~~~~l~s~s~D~--~i~lwd~~~-~~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~D----~~v~vw~ 342 (347)
|+|++..++++++.|+ .++||+++. +.....+.. .+.+..+.|+| |++|+....+ ..+.+|+
T Consensus 387 ~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~ 456 (741)
T 2ecf_A 387 VDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLSK-APGMHSASFARNASVYVDSWSNNSTPPQIELFR 456 (741)
T ss_dssp EETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECCC-SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEE
T ss_pred EeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeeccc-CCCceEEEECCCCCEEEEEecCCCCCCeEEEEE
Confidence 9999987666777776 899999864 555666665 56788999985 6666544322 4566665
No 140
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.88 E-value=3.6e-20 Score=165.01 Aligned_cols=274 Identities=10% Similarity=0.055 Sum_probs=174.2
Q ss_pred CCeEEEEcC---CCeEEE-EeeccCCceEEEEEeecCCCceEEEEEccC---CCcEEEEeccccccccCccccceeeeee
Q 036314 44 DNLGRVWKA---GGVCTH-ILEGHCGAVSSVNIIKSDGLKYVTVATASK---DQTLRLWKFDAEELVNHPKKIRSFKILR 116 (347)
Q Consensus 44 d~~i~iw~~---~~~~~~-~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~---Dg~v~~wd~~~~~~~~~~~~~~~~~~~~ 116 (347)
++.|++|+. .+.... ....+...+..++|+|++ . |++++. ++.|++|++..++. +.+..+.
T Consensus 15 ~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg----~-l~~~~~~~~~~~v~~~~~~~g~~-------~~~~~~~ 82 (347)
T 3hfq_A 15 SQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKD----C-LYSVDKEDDEGGIAAWQIDGQTA-------HKLNTVV 82 (347)
T ss_dssp CCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTC----E-EEEEEEETTEEEEEEEEEETTEE-------EEEEEEE
T ss_pred CCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCC----e-EEEEEecCCCceEEEEEecCCcE-------EEeeeee
Confidence 456777764 244432 344566777889999843 3 444433 68999999965542 2334445
Q ss_pred ccccceEEEEEeCCCCEEEEee-CCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-
Q 036314 117 GHKASVHSIAAETSGNMVCSGS-WDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW- 194 (347)
Q Consensus 117 ~h~~~V~~v~~s~~~~~l~sgs-~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~- 194 (347)
.|...+..++|+|||++|++++ .+++|++|++..... .......... +.... ...+...+.+++|
T Consensus 83 ~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~---~~~~~~~~~~---------~~~p~-~~~~~~~~~~~~~s 149 (347)
T 3hfq_A 83 APGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGA---LTLTDTVQHS---------GHGPR-PEQDGSHIHYTDLT 149 (347)
T ss_dssp EESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSC---EEEEEEEECC---------CCCSS-TTCSSCCEEEEEEC
T ss_pred cCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCC---eeecceeecC---------CCCCC-ccccCCCceEEEEC
Confidence 6777888999999999888877 789999999863211 0000000000 00000 0112234677887
Q ss_pred CCCCeEEEEecCCcEEEEECC-CCceee--eee--eCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCC-CCCCCeEEe
Q 036314 195 PQQETIYSASWDHSVRTWDVE-MGKDLS--DIF--CGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKP-GTSAPVFQF 268 (347)
Q Consensus 195 ~~~~~l~s~s~dg~v~vwd~~-~~~~~~--~~~--~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~-~~~~~~~~~ 268 (347)
|+++.+++...++.|.+||+. +++... .+. .+..+..++++|++..+++++..++.+++|++... +.......+
T Consensus 150 pdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~ 229 (347)
T 3hfq_A 150 PDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIV 229 (347)
T ss_dssp TTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEE
T ss_pred CCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeee
Confidence 567755566668899999998 443221 111 22346678998776656677778899999998641 111112222
Q ss_pred cCCC------CCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCC---ccceeecCCCCeEEEEeecC-CCEEEEccC-Cce
Q 036314 269 SSHN------SWISACKWHNKSWFHLISASYDGKVMLWDLRTA---WPLSVIDSHKDKVLCADWWR-GDSVISGGV-DSK 337 (347)
Q Consensus 269 ~~h~------~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~---~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~-D~~ 337 (347)
.... ..+..++|+|++.+++++...++.|.+||++.. +.+..+..|...+.+++|+| |++|++++. ++.
T Consensus 230 ~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~ 309 (347)
T 3hfq_A 230 KTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDN 309 (347)
T ss_dssp ESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTE
T ss_pred eecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCc
Confidence 2222 357889999999876677788999999999732 33455566666788999985 666766654 599
Q ss_pred EEEee
Q 036314 338 LCVSS 342 (347)
Q Consensus 338 v~vw~ 342 (347)
|.+|+
T Consensus 310 v~v~~ 314 (347)
T 3hfq_A 310 ATLYA 314 (347)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99994
No 141
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.88 E-value=2.4e-21 Score=189.33 Aligned_cols=286 Identities=11% Similarity=0.041 Sum_probs=183.0
Q ss_pred CceeeccCCC-CCEEEEEecCCeEEEEcCC-CeEEEEeeccCC---ceEEEEEeecCCCceEEEEEccCC---------C
Q 036314 25 DWVSAVDGSN-PGFILTGCYDNLGRVWKAG-GVCTHILEGHCG---AVSSVNIIKSDGLKYVTVATASKD---------Q 90 (347)
Q Consensus 25 ~~v~~~~~~~-~~~l~sg~~d~~i~iw~~~-~~~~~~l~~h~~---~V~~v~~~~~~~~~~~~l~s~s~D---------g 90 (347)
..+.++++++ ++++++ +.|++|++||.. +.+...+.+|.. .|.+++|+|++ ..|++++.+ +
T Consensus 17 ~~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg----~~l~~~~~~~~~~~~~~~~ 91 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDR----EYALFSYNVEPIYQHSYTG 91 (723)
T ss_dssp CCCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTS----SEEEEEESCCCCSSSCCCS
T ss_pred ccccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCC----CEEEEEecCccceeeccee
Confidence 3467788884 556655 789999999974 566667777765 48999999954 367888764 7
Q ss_pred cEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccc
Q 036314 91 TLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVE 170 (347)
Q Consensus 91 ~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~ 170 (347)
.+.+||+.+++. +.+....+|...+..++|+|||+.|+.++. +.|++|++.++.... +......
T Consensus 92 ~i~~~d~~~~~~-------~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~----~~~~~~~---- 155 (723)
T 1xfd_A 92 YYVLSKIPHGDP-------QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIR----VVSTGKE---- 155 (723)
T ss_dssp EEEEEESSSCCC-------EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEE----EECCCBT----
T ss_pred eEEEEECCCCce-------EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEE----EecCCCC----
Confidence 888999987642 122223356666888999999999998876 799999987643210 0000000
Q ss_pred cccccccccccccCCc---------cceEEEEe-CCCCeEEEEecCC---------------------------------
Q 036314 171 EPQLEGEAISTLVGHT---------QCVSSVVW-PQQETIYSASWDH--------------------------------- 207 (347)
Q Consensus 171 ~~~~~~~~~~~~~~h~---------~~v~~~~~-~~~~~l~s~s~dg--------------------------------- 207 (347)
-..+.++. ..+.++.| |+++.|++++.|+
T Consensus 156 --------~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 227 (723)
T 1xfd_A 156 --------GVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPS 227 (723)
T ss_dssp --------TTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCE
T ss_pred --------CceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCe
Confidence 00000111 12367888 6788888887653
Q ss_pred -cEEEEECCCCceeeeeee-------CeeeEEEEeeCCCCcEEEEec----CCCcEEEEeCCCCCCCCCeEEe-cCCCCC
Q 036314 208 -SVRTWDVEMGKDLSDIFC-------GKALNCIDIGGEGSALIAAGG----SDPILRIWDPRKPGTSAPVFQF-SSHNSW 274 (347)
Q Consensus 208 -~v~vwd~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~la~~~----~d~~i~iwd~~~~~~~~~~~~~-~~h~~~ 274 (347)
+|.+||+.+++....+.. ...+..++|+|++ .++++.. .+..|++||+.... ....+ ..+..+
T Consensus 228 ~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg-~~l~~~~~~~~~~~~i~~~d~~~g~---~~~~~~~~~~~~ 303 (723)
T 1xfd_A 228 ISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATST-KVAVTWLNRAQNVSILTLCDATTGV---CTKKHEDESEAW 303 (723)
T ss_dssp EEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSS-EEEEEEEETTSCEEEEEEEETTTCC---EEEEEEEECSSC
T ss_pred eEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCC-eEEEEEEcCCCCeEEEEEEeCCCCc---ceEEEEeccCCE
Confidence 799999988775444432 3456788997765 4555543 34689999987432 12222 234455
Q ss_pred ee----EEEeCCCCCeEEEE-EeCCC------cEEEEE-cCCCcc--ceeecCCCCeEEE-EeecC-CCEEEEccC-C--
Q 036314 275 IS----ACKWHNKSWFHLIS-ASYDG------KVMLWD-LRTAWP--LSVIDSHKDKVLC-ADWWR-GDSVISGGV-D-- 335 (347)
Q Consensus 275 v~----~v~~s~~~~~~l~s-~s~D~------~i~lwd-~~~~~~--~~~~~~h~~~v~~-~~~~~-~~~l~s~s~-D-- 335 (347)
+. .++|+|+|..+++. +..|+ .|.+|| ..+++. ...+..+...+.. +.|+| |++|+..+. |
T Consensus 304 ~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~ 383 (723)
T 1xfd_A 304 LHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLP 383 (723)
T ss_dssp CCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCT
T ss_pred EeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCC
Confidence 54 78999999864443 55677 466677 344331 5555544445554 68975 677765444 4
Q ss_pred ceEEEeec
Q 036314 336 SKLCVSSG 343 (347)
Q Consensus 336 ~~v~vw~~ 343 (347)
++++||+.
T Consensus 384 ~~~~l~~~ 391 (723)
T 1xfd_A 384 RRRQLYSA 391 (723)
T ss_dssp TCCEEEEE
T ss_pred cceEEEEE
Confidence 88999974
No 142
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.87 E-value=1.1e-20 Score=191.97 Aligned_cols=284 Identities=8% Similarity=-0.011 Sum_probs=203.4
Q ss_pred CCcCCceeeccCCCCCEEEEEecCCeEEEEcC--CCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEecc
Q 036314 21 SLHDDWVSAVDGSNPGFILTGCYDNLGRVWKA--GGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFD 98 (347)
Q Consensus 21 ~~h~~~v~~~~~~~~~~l~sg~~d~~i~iw~~--~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~ 98 (347)
.+|...+.++.++++.++++++.|++++||.. .+...+.+.+|.. +...+|+|++. .|+.+ .++.|.+|++.
T Consensus 200 ~~~~~~v~~~~~s~d~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~~-~~~~~~SpDG~----~la~~-~~~~i~~~d~~ 273 (1045)
T 1k32_A 200 VDMSTHVSSPVIVGHRIYFITDIDGFGQIYSTDLDGKDLRKHTSFTD-YYPRHLNTDGR----RILFS-KGGSIYIFNPD 273 (1045)
T ss_dssp ECCSSCCEEEEEETTEEEEEECTTSSCEEEEEETTSCSCEECCCCCS-SCEEEEEESSS----CEEEE-ETTEEEEECTT
T ss_pred cCCCCcccceEEeCCEEEEEEeccCceEEEEEeCCCCcceEecCCCC-cceeeEcCCCC----EEEEE-eCCEEEEecCC
Confidence 46888888888876667778888999999974 3544556666654 66779998553 46665 58999999984
Q ss_pred ccccccCccc-cceeeeeeccccceEEEEEe-CCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccc
Q 036314 99 AEELVNHPKK-IRSFKILRGHKASVHSIAAE-TSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEG 176 (347)
Q Consensus 99 ~~~~~~~~~~-~~~~~~~~~h~~~V~~v~~s-~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (347)
..++...... .........|...+.+++|+ |||+.++.++ ++.|.+|++....
T Consensus 274 ~~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~------------------------ 328 (1045)
T 1k32_A 274 TEKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTY------------------------ 328 (1045)
T ss_dssp TCCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSB------------------------
T ss_pred ceEeeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCc------------------------
Confidence 3322100000 00000112356678999999 9999998887 8899999876431
Q ss_pred cccccccCCcc-ceEEEEeCCCCeEEEEecCCcEE-EEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEE
Q 036314 177 EAISTLVGHTQ-CVSSVVWPQQETIYSASWDHSVR-TWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIW 254 (347)
Q Consensus 177 ~~~~~~~~h~~-~v~~~~~~~~~~l~s~s~dg~v~-vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iw 254 (347)
...+..|.. .+..+.|++++.|++++.++.+. +||+..+...........+..++++|+ +..|++++.++.|++|
T Consensus 329 --~~~~~~~~~~~~~~~~~sdg~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpD-G~~la~~~~~~~v~~~ 405 (1045)
T 1k32_A 329 --VLKVPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRN-GKFAVVANDRFEIMTV 405 (1045)
T ss_dssp --EEECSCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTT-SSEEEEEETTSEEEEE
T ss_pred --eEEccCCCcceEEeeeEcCCCeEEEEECCCceEEEEECCCCCceEecCCccceeeeEECCC-CCEEEEECCCCeEEEE
Confidence 112344555 67888888556788888888888 999887654322222245778889765 5677888899999999
Q ss_pred eCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCC----------CcEEEEEcCCCccceeecCCCCeEEEEeec
Q 036314 255 DPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYD----------GKVMLWDLRTAWPLSVIDSHKDKVLCADWW 324 (347)
Q Consensus 255 d~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D----------~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~ 324 (347)
|+... .....+.+|...+.+++|+||+.+ |++++.+ +.|++||+.+++ +..+..|...+.++.|+
T Consensus 406 d~~tg---~~~~~~~~~~~~v~~~~~SpDG~~-la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~s 480 (1045)
T 1k32_A 406 DLETG---KPTVIERSREAMITDFTISDNSRF-IAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFD 480 (1045)
T ss_dssp ETTTC---CEEEEEECSSSCCCCEEECTTSCE-EEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEEC
T ss_pred ECCCC---ceEEeccCCCCCccceEECCCCCe-EEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEc
Confidence 99743 223444578888999999999975 6666654 489999999876 67778888889999998
Q ss_pred C-CCEEEEccCCceEEEeec
Q 036314 325 R-GDSVISGGVDSKLCVSSG 343 (347)
Q Consensus 325 ~-~~~l~s~s~D~~v~vw~~ 343 (347)
| |++|+.++.++...+|+.
T Consensus 481 pdG~~l~~~s~~~~~~~~~~ 500 (1045)
T 1k32_A 481 ADSKNLYYLSYRSLDPSPDR 500 (1045)
T ss_dssp TTSCEEEEEESCCCCCEECS
T ss_pred CCCCEEEEEecccCCcCcch
Confidence 5 778999888888877764
No 143
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.87 E-value=2.4e-20 Score=161.19 Aligned_cols=222 Identities=9% Similarity=0.083 Sum_probs=159.9
Q ss_pred EEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCC-CCCCCccceeee
Q 036314 84 ATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTND-SDAAGNQVSIKK 162 (347)
Q Consensus 84 ~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~-~~~~~~~~~~~~ 162 (347)
.+++.|++|++||+.+++. ..+..|...|.+++|+|+|++|++++ ++.|++||+.+ ...
T Consensus 16 ~~~~~~~~i~~~d~~~~~~----------~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~--------- 75 (297)
T 2ojh_A 16 PGGSMRSSIEIFNIRTRKM----------RVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSP--------- 75 (297)
T ss_dssp --CCCCEEEEEEETTTTEE----------EEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSC---------
T ss_pred CCCCcceeEEEEeCCCCce----------eeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCc---------
Confidence 3567899999999976542 24556889999999999999999876 88999999875 321
Q ss_pred ccCCCccccccccccccccccCC-ccceEEEEe-CCCCeEEEEe--cCCcEEEEEC--CCCceeeeeeeCeeeEEEEeeC
Q 036314 163 RKGNNQVEEPQLEGEAISTLVGH-TQCVSSVVW-PQQETIYSAS--WDHSVRTWDV--EMGKDLSDIFCGKALNCIDIGG 236 (347)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~-~~~~~l~s~s--~dg~v~vwd~--~~~~~~~~~~~~~~~~~~~~~~ 236 (347)
.....+| ...+.++.| |+++.|++++ .++..+||.+ .++. ...+.....+..+.+++
T Consensus 76 ----------------~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~sp 138 (297)
T 2ojh_A 76 ----------------EKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKNLPSYWHGWSP 138 (297)
T ss_dssp ----------------EECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSSSSEEEEEECT
T ss_pred ----------------eEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecCCCccceEECC
Confidence 1112223 245666777 5778888888 4455666654 4443 34444444577788987
Q ss_pred CCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcC-CCccceeecCCC
Q 036314 237 EGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLR-TAWPLSVIDSHK 315 (347)
Q Consensus 237 ~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~-~~~~~~~~~~h~ 315 (347)
++..+++++..++.++||+++... .....+..|...+.++.|+|++..+++++..|+.++||+++ .+..+..+..|.
T Consensus 139 dg~~l~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 216 (297)
T 2ojh_A 139 DGKSFTYCGIRDQVFDIYSMDIDS--GVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSA 216 (297)
T ss_dssp TSSEEEEEEEETTEEEEEEEETTT--CCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCS
T ss_pred CCCEEEEEECCCCceEEEEEECCC--CcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCC
Confidence 766565578889999999865322 23456677888899999999997655555579999999986 455677788888
Q ss_pred CeEEEEeecC-CCEEEEccCC-----------ceEEEeecc
Q 036314 316 DKVLCADWWR-GDSVISGGVD-----------SKLCVSSGV 344 (347)
Q Consensus 316 ~~v~~~~~~~-~~~l~s~s~D-----------~~v~vw~~~ 344 (347)
..+.++.|+| |++|+.++.| +.|.+|+..
T Consensus 217 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~ 257 (297)
T 2ojh_A 217 YGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMD 257 (297)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETT
T ss_pred cccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecC
Confidence 8899999985 7778887765 669999753
No 144
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.86 E-value=2.5e-20 Score=171.28 Aligned_cols=205 Identities=13% Similarity=0.125 Sum_probs=142.7
Q ss_pred CCceeeccCC-CCCEEEEEecCCeEEEEcCC------------CeEEE----EeeccCCceEEEEEeecCCCceEEEE--
Q 036314 24 DDWVSAVDGS-NPGFILTGCYDNLGRVWKAG------------GVCTH----ILEGHCGAVSSVNIIKSDGLKYVTVA-- 84 (347)
Q Consensus 24 ~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~------------~~~~~----~l~~h~~~V~~v~~~~~~~~~~~~l~-- 84 (347)
...++.++++ +++++++++.|+ +++|+.. ..... ....|.+.|.+++|++++ .+|+
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg----~~lav~ 110 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDN----LTLSAC 110 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTS----CEEEEE
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCC----CEEEEE
Confidence 4457777776 567999999888 8887531 01110 112356789999999854 3577
Q ss_pred --EccCCCcEEEEeccccccc--cCccccceeeeeeccccceEEEEEeCC-CCEEEEeeCCCcEEEEecCCCCCCCccce
Q 036314 85 --TASKDQTLRLWKFDAEELV--NHPKKIRSFKILRGHKASVHSIAAETS-GNMVCSGSWDCTISLWRTNDSDAAGNQVS 159 (347)
Q Consensus 85 --s~s~Dg~v~~wd~~~~~~~--~~~~~~~~~~~~~~h~~~V~~v~~s~~-~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~ 159 (347)
+++.|++|++||+.+.... ...+....+..+.+|...|.+++|+|+ +.+|++++.||+|++||+++..
T Consensus 111 ~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~------- 183 (434)
T 2oit_A 111 MMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETV------- 183 (434)
T ss_dssp EEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSE-------
T ss_pred EeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCc-------
Confidence 8999999999998754100 000112234567789999999999998 7899999999999999987531
Q ss_pred eeeccCCCccccccccccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeeee--------CeeeE
Q 036314 160 IKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFC--------GKALN 230 (347)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~--------~~~~~ 230 (347)
......+|...|.+++| +++++|++++.||+|++||++ +.....+.. ...+.
T Consensus 184 ------------------~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~ 244 (434)
T 2oit_A 184 ------------------KVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVL 244 (434)
T ss_dssp ------------------EEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEE
T ss_pred ------------------ceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEE
Confidence 12234568889999999 578899999999999999998 444433321 12677
Q ss_pred EEEeeCCCCcEEEEecCCC------cEEEEeCCCC
Q 036314 231 CIDIGGEGSALIAAGGSDP------ILRIWDPRKP 259 (347)
Q Consensus 231 ~~~~~~~~~~~la~~~~d~------~i~iwd~~~~ 259 (347)
++.+.++...+++....|| .+++||+++.
T Consensus 245 ~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 245 DVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred EEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 8888765433333333443 3899999754
No 145
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.86 E-value=3.5e-19 Score=157.35 Aligned_cols=229 Identities=12% Similarity=0.079 Sum_probs=163.4
Q ss_pred EEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeC-CCcEEEEecCCCCCCCccce
Q 036314 81 VTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSW-DCTISLWRTNDSDAAGNQVS 159 (347)
Q Consensus 81 ~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~-Dg~I~iwd~~~~~~~~~~~~ 159 (347)
..+++++.+++|++||+.++++ ...+..+..++ .++|+|+|++++.++. ++.|.+||..+....
T Consensus 11 ~~~v~~~~~~~v~~~d~~~~~~---------~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~----- 75 (331)
T 3u4y_A 11 FGIVVEQHLRRISFFSTDTLEI---------LNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPK----- 75 (331)
T ss_dssp EEEEEEGGGTEEEEEETTTCCE---------EEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCE-----
T ss_pred EEEEEecCCCeEEEEeCcccce---------eeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCcee-----
Confidence 4678899999999999987653 23344455566 9999999996665555 899999998754210
Q ss_pred eeeccCCCccccccccccccccccCCccceEEEEe-CCCCeEEEEecCC---cEEEEECCCCceeeeeeeCeeeEEEEee
Q 036314 160 IKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDH---SVRTWDVEMGKDLSDIFCGKALNCIDIG 235 (347)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg---~v~vwd~~~~~~~~~~~~~~~~~~~~~~ 235 (347)
...+..+..+..+++| |++++++++..++ .|.+||+.+++.+..+..+.....++++
T Consensus 76 -------------------~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s 136 (331)
T 3u4y_A 76 -------------------VVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAIS 136 (331)
T ss_dssp -------------------EEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEEC
T ss_pred -------------------EEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEEC
Confidence 1222333444443666 6778888555553 8999999998877777666667889998
Q ss_pred CCCCcEEEEecCCCc-EEEEeCCCCCCCCCe-EEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCcc---cee
Q 036314 236 GEGSALIAAGGSDPI-LRIWDPRKPGTSAPV-FQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWP---LSV 310 (347)
Q Consensus 236 ~~~~~~la~~~~d~~-i~iwd~~~~~~~~~~-~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~---~~~ 310 (347)
|++..++++...++. |.+|++...+..... .....+......++|+|++.++++++..++.|.+||+++++. +..
T Consensus 137 pdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~ 216 (331)
T 3u4y_A 137 PNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNA 216 (331)
T ss_dssp TTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEE
T ss_pred CCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeee
Confidence 887667777777788 999998743221111 122234456789999999987677777899999999998887 666
Q ss_pred ecCCCCeEEEEeecC-CCEE-EEccCCceEEEeecc
Q 036314 311 IDSHKDKVLCADWWR-GDSV-ISGGVDSKLCVSSGV 344 (347)
Q Consensus 311 ~~~h~~~v~~~~~~~-~~~l-~s~s~D~~v~vw~~~ 344 (347)
+..+ ..+.+++|+| |++| ++...++.|.+|+..
T Consensus 217 ~~~~-~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~ 251 (331)
T 3u4y_A 217 VGTN-NLPGTIVVSRDGSTVYVLTESTVDVFNFNQL 251 (331)
T ss_dssp EECS-SCCCCEEECTTSSEEEEECSSEEEEEEEETT
T ss_pred ccCC-CCCceEEECCCCCEEEEEEcCCCEEEEEECC
Confidence 6643 5678899985 6644 555578899999854
No 146
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.86 E-value=3.9e-20 Score=176.48 Aligned_cols=264 Identities=13% Similarity=0.051 Sum_probs=179.7
Q ss_pred CCceeeccCC-CCCEEEEEec-CCeEEEEcCCCeEEEEeeccC-CceEEEEEeecCCCceEEEEEccC---CCcEEEEec
Q 036314 24 DDWVSAVDGS-NPGFILTGCY-DNLGRVWKAGGVCTHILEGHC-GAVSSVNIIKSDGLKYVTVATASK---DQTLRLWKF 97 (347)
Q Consensus 24 ~~~v~~~~~~-~~~~l~sg~~-d~~i~iw~~~~~~~~~l~~h~-~~V~~v~~~~~~~~~~~~l~s~s~---Dg~v~~wd~ 97 (347)
..+|.+++|+ +|++||+++. ||+++||++.+...+.+..|. ..|.+++|+|+ ..+++++. +...++|.+
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-----~~l~~~~~~~g~~~~~l~~~ 95 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-----RVILVRDVSKGAEQHALFKV 95 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-----EEEEEEECSTTSCCEEEEEE
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-----eEEEEeccCCCCcceEEEEE
Confidence 4579999988 6779998887 999999997654445566555 68999999873 35666654 566788776
Q ss_pred cc--cccccCccccceeeeeeccccceEEEEEeCCCC--EEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccc
Q 036314 98 DA--EELVNHPKKIRSFKILRGHKASVHSIAAETSGN--MVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQ 173 (347)
Q Consensus 98 ~~--~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~--~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (347)
+. ... .. .+..+ ..+...+|+|||+ .+++++.|+ +.+||+.++..
T Consensus 96 ~~~~~g~--------~~-~l~~~-~~~~~~~~s~dg~~~~~~s~~~~~-~~l~d~~~g~~-------------------- 144 (582)
T 3o4h_A 96 NTSRPGE--------EQ-RLEAV-KPMRILSGVDTGEAVVFTGATEDR-VALYALDGGGL-------------------- 144 (582)
T ss_dssp ETTSTTC--------CE-ECTTS-CSBEEEEEEECSSCEEEEEECSSC-EEEEEEETTEE--------------------
T ss_pred eccCCCc--------cc-cccCC-CCceeeeeCCCCCeEEEEecCCCC-ceEEEccCCcE--------------------
Confidence 53 110 01 12111 1233557788875 444555555 45999865321
Q ss_pred ccccccccccCCccceEEEEe-CCCCeEEEEecC----CcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCC
Q 036314 174 LEGEAISTLVGHTQCVSSVVW-PQQETIYSASWD----HSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSD 248 (347)
Q Consensus 174 ~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~d----g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d 248 (347)
..+..+.. .+++| |+++.|++++.| +.|.+||+.+++..........+...+|+|++ +.|+++..+
T Consensus 145 ------~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG-~~l~~~~~~ 215 (582)
T 3o4h_A 145 ------RELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGM-KVTAGLETA 215 (582)
T ss_dssp ------EEEEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTS-CEEEEEECS
T ss_pred ------EEeecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecCCCccccceECCCC-CEEEEccCC
Confidence 11111222 45566 689999988877 78999999887754322233456888997765 566677778
Q ss_pred C--cEEEEeCCCCCCCCCeEEecCCCCCeeEEE--------eCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeE
Q 036314 249 P--ILRIWDPRKPGTSAPVFQFSSHNSWISACK--------WHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKV 318 (347)
Q Consensus 249 ~--~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~--------~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v 318 (347)
+ .|++||+.... .. .+.+|...+..+. |+||+ .++++++.|++++||++ ++... .+.+.|
T Consensus 216 ~~~~i~~~d~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~g~~~l~~~--g~~~~---~~~~~v 285 (582)
T 3o4h_A 216 REARLVTVDPRDGS---VE-DLELPSKDFSSYRPTAITWLGYLPDG-RLAVVARREGRSAVFID--GERVE---APQGNH 285 (582)
T ss_dssp SCEEEEEECTTTCC---EE-ECCCSCSHHHHHCCSEEEEEEECTTS-CEEEEEEETTEEEEEET--TEEEC---CCSSEE
T ss_pred CeeEEEEEcCCCCc---EE-EccCCCcChhhhhhccccceeEcCCC-cEEEEEEcCCcEEEEEE--CCeec---cCCCce
Confidence 8 89999987432 23 6667777777777 99999 78999999999999999 55443 344678
Q ss_pred EEEeecCCCEEEEccCCce---EEEee
Q 036314 319 LCADWWRGDSVISGGVDSK---LCVSS 342 (347)
Q Consensus 319 ~~~~~~~~~~l~s~s~D~~---v~vw~ 342 (347)
.+++|++++.+++++.+.+ |.+|+
T Consensus 286 ~~~~~sdg~~l~~~s~~~~p~~l~~~d 312 (582)
T 3o4h_A 286 GRVVLWRGKLVTSHTSLSTPPRIVSLP 312 (582)
T ss_dssp EEEEEETTEEEEEEEETTEEEEEEEET
T ss_pred EEEEecCCEEEEEEcCCCCCCeEEEEc
Confidence 8999997767787777644 66655
No 147
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.85 E-value=5e-19 Score=156.60 Aligned_cols=267 Identities=9% Similarity=0.111 Sum_probs=169.0
Q ss_pred CcCCceeeccCC-CCCEEEEEecC-CeEEEEcCC---Ce--EEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEE
Q 036314 22 LHDDWVSAVDGS-NPGFILTGCYD-NLGRVWKAG---GV--CTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRL 94 (347)
Q Consensus 22 ~h~~~v~~~~~~-~~~~l~sg~~d-~~i~iw~~~---~~--~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~ 94 (347)
.|...+..++++ ++++|++++.+ +.+++|++. +. .+..+..+. .+..++|+|++. ..++++..++.|++
T Consensus 35 ~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~---~l~~~~~~~~~i~~ 110 (343)
T 1ri6_A 35 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQ---FVFVGSYNAGNVSV 110 (343)
T ss_dssp ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSS---EEEEEETTTTEEEE
T ss_pred ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCC---EEEEEecCCCeEEE
Confidence 466778888988 45678888887 899999864 33 233454444 788999998543 23445556899999
Q ss_pred EeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEee-CCCcEEEEecCC-CCCCCccceeeeccCCCccccc
Q 036314 95 WKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGS-WDCTISLWRTND-SDAAGNQVSIKKRKGNNQVEEP 172 (347)
Q Consensus 95 wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs-~Dg~I~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~ 172 (347)
||+..++ ..+....+..+ ..+.+++|+|+++++++++ .|+.|++||+.+ +...
T Consensus 111 ~d~~~~~------~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~------------------ 165 (343)
T 1ri6_A 111 TRLEDGL------PVGVVDVVEGL-DGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLV------------------ 165 (343)
T ss_dssp EEEETTE------EEEEEEEECCC-TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEE------------------
T ss_pred EECCCCc------cccccccccCC-CCceEEEECCCCCEEEEecCCCCEEEEEEecCCCcee------------------
Confidence 9984221 11223334333 4588899999999888776 899999999875 2110
Q ss_pred cccccccc--ccc-CCccceEEEEe-CCCCeEEEE-ecCCcEEEEECCC--Cce--eeeee---eC----eeeEEEEeeC
Q 036314 173 QLEGEAIS--TLV-GHTQCVSSVVW-PQQETIYSA-SWDHSVRTWDVEM--GKD--LSDIF---CG----KALNCIDIGG 236 (347)
Q Consensus 173 ~~~~~~~~--~~~-~h~~~v~~~~~-~~~~~l~s~-s~dg~v~vwd~~~--~~~--~~~~~---~~----~~~~~~~~~~ 236 (347)
... .+. .....+..++| |++++++.+ ..++.|.+||+.. +.. ...+. .. ..+..+++++
T Consensus 166 -----~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~ 240 (343)
T 1ri6_A 166 -----AQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITP 240 (343)
T ss_dssp -----EEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECT
T ss_pred -----eecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECC
Confidence 000 011 11234667777 567766554 4789999999953 332 11111 11 1345688887
Q ss_pred CCCcEEEEecCCCcEEEEeCCCCC-CCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcC--CCc--cceee
Q 036314 237 EGSALIAAGGSDPILRIWDPRKPG-TSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLR--TAW--PLSVI 311 (347)
Q Consensus 237 ~~~~~la~~~~d~~i~iwd~~~~~-~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~--~~~--~~~~~ 311 (347)
++..+++++..++.|++||+.... ....+..+..+.. +..++|+|++.++++++..|+.|.+|+++ +++ .+..+
T Consensus 241 dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~ 319 (343)
T 1ri6_A 241 DGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRY 319 (343)
T ss_dssp TSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEE
T ss_pred CCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEcccc
Confidence 766666677789999999987321 1223344444444 88999999997644444478999999554 543 23333
Q ss_pred cCCCCeEEEEeec
Q 036314 312 DSHKDKVLCADWW 324 (347)
Q Consensus 312 ~~h~~~v~~~~~~ 324 (347)
... ....+++|.
T Consensus 320 ~~g-~~p~~i~~~ 331 (343)
T 1ri6_A 320 AVG-QGPMWVVVN 331 (343)
T ss_dssp ECS-SSCCEEEEE
T ss_pred ccC-CCCeeEEEE
Confidence 332 344566664
No 148
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.84 E-value=1.2e-18 Score=154.74 Aligned_cols=272 Identities=13% Similarity=0.039 Sum_probs=169.2
Q ss_pred eccCCC-CCEEEEEecCCeEEEEcCC-CeEEEEeeccC-CceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccC
Q 036314 29 AVDGSN-PGFILTGCYDNLGRVWKAG-GVCTHILEGHC-GAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNH 105 (347)
Q Consensus 29 ~~~~~~-~~~l~sg~~d~~i~iw~~~-~~~~~~l~~h~-~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~ 105 (347)
.+++++ +.++++++.+++|++||.. ++.++.+..+. ..+..++|+|++. ..+++++.+++|.+||+.+++..
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~---~~~v~~~~~~~i~~~d~~t~~~~-- 78 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNR---TAYVLNNHYGDIYGIDLDTCKNT-- 78 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSS---EEEEEETTTTEEEEEETTTTEEE--
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCC---EEEEEeCCCCcEEEEeCCCCcEE--
Confidence 345554 4589999999999999975 56666666443 2467899988543 24566778999999999876432
Q ss_pred ccccceeeeee-cc-----ccceEEEEEeCCCCEEEEeeCC------------CcEEEEecCCCCCCCccceeeeccCCC
Q 036314 106 PKKIRSFKILR-GH-----KASVHSIAAETSGNMVCSGSWD------------CTISLWRTNDSDAAGNQVSIKKRKGNN 167 (347)
Q Consensus 106 ~~~~~~~~~~~-~h-----~~~V~~v~~s~~~~~l~sgs~D------------g~I~iwd~~~~~~~~~~~~~~~~~~~~ 167 (347)
..+. ++ ...+..++|+|+|+++++++.+ +.|.+||+.++...
T Consensus 79 -------~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~------------- 138 (349)
T 1jmx_B 79 -------FHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEA------------- 138 (349)
T ss_dssp -------EEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGB-------------
T ss_pred -------EEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCcccc-------------
Confidence 2222 12 2336789999999999988866 89999998653210
Q ss_pred ccccccccccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeeeeCe-------------------
Q 036314 168 QVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGK------------------- 227 (347)
Q Consensus 168 ~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~------------------- 227 (347)
..+..+.. ...+.+++| ++++ ++.++ +.|.+||+++++.+..+....
T Consensus 139 ---------~~~~~~~~-~~~~~~~~~s~dg~-l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (349)
T 1jmx_B 139 ---------KPVRTFPM-PRQVYLMRAADDGS-LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQS 205 (349)
T ss_dssp ---------CCSEEEEC-CSSCCCEEECTTSC-EEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCC
T ss_pred ---------ceeeeccC-CCcccceeECCCCc-EEEcc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCC
Confidence 01111121 224566777 4666 66554 449999999887665543221
Q ss_pred ------eeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCC-CCCeEEEEEeCCCcEEEE
Q 036314 228 ------ALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHN-KSWFHLISASYDGKVMLW 300 (347)
Q Consensus 228 ------~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~-~~~~~l~s~s~D~~i~lw 300 (347)
....+.+.+++............+..+|.... ......+..+...+..+.|+| ++.. |+++ ++.|.+|
T Consensus 206 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~sp~dg~~-l~~~--~~~v~~~ 280 (349)
T 1jmx_B 206 PRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTG--KTHTQEFADLTELYFTGLRSPKDPNQ-IYGV--LNRLAKY 280 (349)
T ss_dssp TTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTC--CEEEEEEEECSSCEEEEEECSSCTTE-EEEE--ESEEEEE
T ss_pred cceeEEeeeeeeecCCCcCCccccccceeEEEEeccCC--cEEecccccCCCcceeeEecCCCCCE-EEEE--cCeEEEE
Confidence 12223332211100000000011112343321 111222333556788899999 8875 5555 8899999
Q ss_pred EcCCCccceeecCCCCeEEEEeecC-CCEEEEccCCceEEEeecc
Q 036314 301 DLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 301 d~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~D~~v~vw~~~ 344 (347)
|+++++.+..+.. ...+.+++|++ |++|++++.++.|.+|+..
T Consensus 281 d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~ 324 (349)
T 1jmx_B 281 DLKQRKLIKAANL-DHTYYCVAFDKKGDKLYLGGTFNDLAVFNPD 324 (349)
T ss_dssp ETTTTEEEEEEEC-SSCCCEEEECSSSSCEEEESBSSEEEEEETT
T ss_pred ECccCeEEEEEcC-CCCccceEECCCCCEEEEecCCCeEEEEecc
Confidence 9999887777653 33567899985 6677778889999999964
No 149
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.83 E-value=3e-19 Score=174.06 Aligned_cols=281 Identities=12% Similarity=0.083 Sum_probs=175.7
Q ss_pred eeccCCCCCEEEEEecCCeEEEEcCC-CeEE-EEeeccC-----------------CceEEEEEeecCCCceEEEEEccC
Q 036314 28 SAVDGSNPGFILTGCYDNLGRVWKAG-GVCT-HILEGHC-----------------GAVSSVNIIKSDGLKYVTVATASK 88 (347)
Q Consensus 28 ~~~~~~~~~~l~sg~~d~~i~iw~~~-~~~~-~~l~~h~-----------------~~V~~v~~~~~~~~~~~~l~s~s~ 88 (347)
..+.+. ++.+++++.|+ | +||.. |+.+ ..+..|. ..|.+++|+|+ + ..+++ .
T Consensus 29 ~~~~w~-g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~---~~~~~--~ 99 (706)
T 2z3z_A 29 VGLQWM-GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-G---LVVLF--T 99 (706)
T ss_dssp TTCEEE-TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-T---EEEEE--E
T ss_pred CCCcCc-CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-C---eEEEE--E
Confidence 334444 66777777788 8 99975 4442 4444443 45899999985 3 23333 4
Q ss_pred CCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCC-----CCCCCccceeeec
Q 036314 89 DQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTND-----SDAAGNQVSIKKR 163 (347)
Q Consensus 89 Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~-----~~~~~~~~~~~~~ 163 (347)
|++|++||+.+++. ..+..|...+.+++|+|||+.|+. +.|+.|++|++.+ +.... ....
T Consensus 100 ~~~i~~~d~~~~~~----------~~l~~~~~~~~~~~~SpdG~~la~-~~~~~i~v~~~~~~~~~~g~~~~----~~~~ 164 (706)
T 2z3z_A 100 QGGLVGFDMLARKV----------TYLFDTNEETASLDFSPVGDRVAY-VRNHNLYIARGGKLGEGMSRAIA----VTID 164 (706)
T ss_dssp TTEEEEEETTTTEE----------EEEECCTTCCTTCEECTTSSEEEE-EETTEEEEEECBCTTSCCCCCEE----SCSC
T ss_pred CCEEEEEECCCCce----------EEccCCcccccCCcCCCCCCEEEE-EECCeEEEEecCcccccCCCcEE----eccC
Confidence 59999999976542 234456777888999999999988 4789999999876 32110 0000
Q ss_pred cCCCccccccccccccccccCCccceEEEEe-CCCCeEEEEe---------------------------------cCCcE
Q 036314 164 KGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSAS---------------------------------WDHSV 209 (347)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s---------------------------------~dg~v 209 (347)
.. ... ..+.. ....+...+.++.| |+++.|++++ .+..|
T Consensus 165 ~~-~~~----~~g~~--~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l 237 (706)
T 2z3z_A 165 GT-ETL----VYGQA--VHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTV 237 (706)
T ss_dssp CB-TTE----EESSC--CGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEE
T ss_pred CC-CCe----Ecccc--hhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEE
Confidence 00 000 00000 01111223466777 5888888887 44679
Q ss_pred EEEECCCCceeeeee---eCeeeEEEEeeCCCCcEEEEecCCC-----cEEEEeCCCCCCCCCeEEecCCCCC---eeEE
Q 036314 210 RTWDVEMGKDLSDIF---CGKALNCIDIGGEGSALIAAGGSDP-----ILRIWDPRKPGTSAPVFQFSSHNSW---ISAC 278 (347)
Q Consensus 210 ~vwd~~~~~~~~~~~---~~~~~~~~~~~~~~~~~la~~~~d~-----~i~iwd~~~~~~~~~~~~~~~h~~~---v~~v 278 (347)
.+||+.+++...... ....+..++|+|++ ..|++++.++ .|++||+........+.. ..+..+ +.++
T Consensus 238 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg-~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~-~~~~~~~~~~~~~ 315 (706)
T 2z3z_A 238 GIYHLATGKTVYLQTGEPKEKFLTNLSWSPDE-NILYVAEVNRAQNECKVNAYDAETGRFVRTLFV-ETDKHYVEPLHPL 315 (706)
T ss_dssp EEEETTTTEEEECCCCSCTTCEEEEEEECTTS-SEEEEEEECTTSCEEEEEEEETTTCCEEEEEEE-EECSSCCCCCSCC
T ss_pred EEEECCCCceEeeccCCCCceeEeeEEEECCC-CEEEEEEeCCCCCeeEEEEEECCCCceeeEEEE-ccCCCeECccCCc
Confidence 999998876543221 22457789997765 4556655554 899999875311111111 223333 3678
Q ss_pred EeCC--CCCeEEEEEeCCCcEEEEEcC-CCccceeecCCCCeEEE-EeecC-CCEEE-EccCCc----eEEEee
Q 036314 279 KWHN--KSWFHLISASYDGKVMLWDLR-TAWPLSVIDSHKDKVLC-ADWWR-GDSVI-SGGVDS----KLCVSS 342 (347)
Q Consensus 279 ~~s~--~~~~~l~s~s~D~~i~lwd~~-~~~~~~~~~~h~~~v~~-~~~~~-~~~l~-s~s~D~----~v~vw~ 342 (347)
.|+| ++. +|++++.|+.++||+++ ++..+..+..|...+.+ +.|++ |++|+ +++.++ .|..|+
T Consensus 316 ~~sp~~dg~-~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d 388 (706)
T 2z3z_A 316 TFLPGSNNQ-FIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCID 388 (706)
T ss_dssp EECTTCSSE-EEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEE
T ss_pred eeecCCCCE-EEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEE
Confidence 9999 885 68889999999999886 56667778888878876 78985 55654 445554 555554
No 150
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.83 E-value=8.7e-19 Score=171.18 Aligned_cols=292 Identities=8% Similarity=-0.012 Sum_probs=167.2
Q ss_pred ceeeccCC-CCCEEEEEecC---------CeEEEEcCCCeEEEEee---ccCCceEEEEEeecCCCceEEEEEccCCCcE
Q 036314 26 WVSAVDGS-NPGFILTGCYD---------NLGRVWKAGGVCTHILE---GHCGAVSSVNIIKSDGLKYVTVATASKDQTL 92 (347)
Q Consensus 26 ~v~~~~~~-~~~~l~sg~~d---------~~i~iw~~~~~~~~~l~---~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v 92 (347)
.|.+++++ ++++||+++.+ +.+++||..+...+.+. +|...+..++|+|++. .|+.++. ++|
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~----~la~~~~-~~i 136 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQ----QLIFIFE-NNI 136 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTT----CEEEEET-TEE
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCC----EEEEEEC-CeE
Confidence 48899998 56689998875 77889997643223443 4555588999999654 4777765 799
Q ss_pred EEEeccccccccCccccceeeeeeccccc------------------eEEEEEeCCCCEEEEeeCCC-cEEEEecCCCCC
Q 036314 93 RLWKFDAEELVNHPKKIRSFKILRGHKAS------------------VHSIAAETSGNMVCSGSWDC-TISLWRTNDSDA 153 (347)
Q Consensus 93 ~~wd~~~~~~~~~~~~~~~~~~~~~h~~~------------------V~~v~~s~~~~~l~sgs~Dg-~I~iwd~~~~~~ 153 (347)
++||+.+++.. .....+... +.+++|+|||+.|+.++.|+ .+++|++.....
T Consensus 137 ~~~~~~~g~~~---------~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~ 207 (723)
T 1xfd_A 137 YYCAHVGKQAI---------RVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTG 207 (723)
T ss_dssp EEESSSSSCCE---------EEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSS
T ss_pred EEEECCCCceE---------EEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCC
Confidence 99999876421 122222222 37899999999999887653 445554432110
Q ss_pred CCcc-c-eeeec-cCCC----ccccccc-cccccccccC------CccceEEEEe-CCCCeEEEEec----CCcEEEEEC
Q 036314 154 AGNQ-V-SIKKR-KGNN----QVEEPQL-EGEAISTLVG------HTQCVSSVVW-PQQETIYSASW----DHSVRTWDV 214 (347)
Q Consensus 154 ~~~~-~-~~~~~-~~~~----~~~~~~~-~~~~~~~~~~------h~~~v~~~~~-~~~~~l~s~s~----dg~v~vwd~ 214 (347)
.... . ..... .+.. .+..... .++....+.. +...+..+.| |+++.|++.+. +..|.+||+
T Consensus 208 ~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~ 287 (723)
T 1xfd_A 208 SIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDA 287 (723)
T ss_dssp SSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEET
T ss_pred cCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeC
Confidence 0000 0 00000 0000 0000000 0111122222 3567888888 46666666543 357999999
Q ss_pred CCCceeeeeeeC--eee----EEEEeeCCCCcEEEE-ecCCC------cEEEEeCCCCCCCCCeEEecCCCCCeeE-EEe
Q 036314 215 EMGKDLSDIFCG--KAL----NCIDIGGEGSALIAA-GGSDP------ILRIWDPRKPGTSAPVFQFSSHNSWISA-CKW 280 (347)
Q Consensus 215 ~~~~~~~~~~~~--~~~----~~~~~~~~~~~~la~-~~~d~------~i~iwd~~~~~~~~~~~~~~~h~~~v~~-v~~ 280 (347)
.+++....+... ..+ ..+.|+|++..++.. +..++ .|.+||+...+.......+..+...+.. ++|
T Consensus 288 ~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~ 367 (723)
T 1xfd_A 288 TTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAY 367 (723)
T ss_dssp TTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEE
T ss_pred CCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEE
Confidence 988765443321 112 267888777666554 55666 5667773222220002233333333444 689
Q ss_pred CCCCCeEEEEEeCC--CcEEEEEcCCCc--cceeecC---CCCeEEEEeecC-CCEEEE
Q 036314 281 HNKSWFHLISASYD--GKVMLWDLRTAW--PLSVIDS---HKDKVLCADWWR-GDSVIS 331 (347)
Q Consensus 281 s~~~~~~l~s~s~D--~~i~lwd~~~~~--~~~~~~~---h~~~v~~~~~~~-~~~l~s 331 (347)
+|++..+++++..+ +.++||+++... ....+.. |...+..+.|+| |++|+.
T Consensus 368 spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~ 426 (723)
T 1xfd_A 368 DEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLL 426 (723)
T ss_dssp ETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEE
T ss_pred cCCCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEE
Confidence 99998644455555 889999986432 3344443 677788999986 666553
No 151
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.83 E-value=2.1e-18 Score=153.51 Aligned_cols=253 Identities=10% Similarity=0.083 Sum_probs=161.6
Q ss_pred CcCCceeeccCCCCCEEEEEec---CCeEEEEcCC-Ce--EEEEeeccCCceEEEEEeecCCCceEEEEEcc-CCCcEEE
Q 036314 22 LHDDWVSAVDGSNPGFILTGCY---DNLGRVWKAG-GV--CTHILEGHCGAVSSVNIIKSDGLKYVTVATAS-KDQTLRL 94 (347)
Q Consensus 22 ~h~~~v~~~~~~~~~~l~sg~~---d~~i~iw~~~-~~--~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s-~Dg~v~~ 94 (347)
.+...+..+++++++.|++++. ++.|++|++. +. .+..+..+...+..++|+|++. .|++++ .+++|++
T Consensus 37 ~~~~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~----~l~~~~~~~~~v~v 112 (347)
T 3hfq_A 37 AATQNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQ----LVYSANYHKGTAEV 112 (347)
T ss_dssp EECSCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTT----EEEEEETTTTEEEE
T ss_pred eccCCcceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCC----EEEEEeCCCCEEEE
Confidence 3445667788885443555544 6899999974 33 3344556778889999999553 455555 7899999
Q ss_pred Eeccc-cccccCccccceeeeeec---------cccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeecc
Q 036314 95 WKFDA-EELVNHPKKIRSFKILRG---------HKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRK 164 (347)
Q Consensus 95 wd~~~-~~~~~~~~~~~~~~~~~~---------h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~ 164 (347)
|++.. ++. +.+..+.. +...+.+++|+|+|+++++...++.|++|++.... ...
T Consensus 113 ~~~~~~g~~-------~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g---~~~------ 176 (347)
T 3hfq_A 113 MKIAADGAL-------TLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAG---QLS------ 176 (347)
T ss_dssp EEECTTSCE-------EEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTS---CEE------
T ss_pred EEeCCCCCe-------eecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCC---cEE------
Confidence 99853 221 11222211 22358899999999977777788999999987211 000
Q ss_pred CCCccccccccccccccccC-CccceEEEEe-CCCCeEEE-EecCCcEEEEECCC--Ccee--eeeee---C----eeeE
Q 036314 165 GNNQVEEPQLEGEAISTLVG-HTQCVSSVVW-PQQETIYS-ASWDHSVRTWDVEM--GKDL--SDIFC---G----KALN 230 (347)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~-~~~~~l~s-~s~dg~v~vwd~~~--~~~~--~~~~~---~----~~~~ 230 (347)
....+.. .......++| |++++++. ...++.+.+|++.. ++.. ..+.. . ..+.
T Consensus 177 -------------~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 243 (347)
T 3hfq_A 177 -------------EQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAA 243 (347)
T ss_dssp -------------EEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEE
T ss_pred -------------EeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcce
Confidence 0000111 1123456777 57776655 56778999999874 4321 11111 1 3467
Q ss_pred EEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEc--CCCcc
Q 036314 231 CIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDL--RTAWP 307 (347)
Q Consensus 231 ~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~--~~~~~ 307 (347)
.+++++++..++++...++.|.+||+...+....+..+..+...+..++|+|++.+++++...++.|.+|++ ++++.
T Consensus 244 ~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l 322 (347)
T 3hfq_A 244 AIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKL 322 (347)
T ss_dssp EEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCE
T ss_pred eEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeE
Confidence 788987766566777778999999986432233455666677778999999999764444445689999955 45543
No 152
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.82 E-value=2.9e-17 Score=146.99 Aligned_cols=283 Identities=8% Similarity=0.048 Sum_probs=171.3
Q ss_pred CEEEEEec----CCeEEEEcC---CCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCC----CcEEEEecccccccc
Q 036314 36 GFILTGCY----DNLGRVWKA---GGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKD----QTLRLWKFDAEELVN 104 (347)
Q Consensus 36 ~~l~sg~~----d~~i~iw~~---~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~D----g~v~~wd~~~~~~~~ 104 (347)
.++..|++ ++.|.+|+. .+........+...+..++|+|++ ..|++++.+ +.|++|+++..+
T Consensus 14 ~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg----~~l~~~~~~~~~~~~v~~~~~~~~~--- 86 (361)
T 3scy_A 14 LTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADG----KFVYSVNEFSKDQAAVSAFAFDKEK--- 86 (361)
T ss_dssp EEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTS----SEEEEEECCSSTTCEEEEEEEETTT---
T ss_pred eEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCC----CEEEEEEccCCCCCcEEEEEEeCCC---
Confidence 35566644 568999964 244332222267777889999854 357777775 799999987521
Q ss_pred CccccceeeeeeccccceEEEEEeCCCCEEEEee-CCCcEEEEecCCCCCCCccceeeeccCCCcccccccccccccccc
Q 036314 105 HPKKIRSFKILRGHKASVHSIAAETSGNMVCSGS-WDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLV 183 (347)
Q Consensus 105 ~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs-~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (347)
...+.+.....+......+++ +++++++++ .+++|.+|++................ +.......
T Consensus 87 --g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~-----------g~~~~~~~ 151 (361)
T 3scy_A 87 --GTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFK-----------GSGPDKER 151 (361)
T ss_dssp --TEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECC-----------CCCSCTTT
T ss_pred --CcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEcc-----------CCCCCccc
Confidence 111233344445556677777 788777665 68899999986532211111000000 00000011
Q ss_pred CCccceEEEEe-CCCCeEEEEe-cCCcEEEEECCCCce------e--------eeeeeCeeeEEEEeeCCCCcEEEEecC
Q 036314 184 GHTQCVSSVVW-PQQETIYSAS-WDHSVRTWDVEMGKD------L--------SDIFCGKALNCIDIGGEGSALIAAGGS 247 (347)
Q Consensus 184 ~h~~~v~~~~~-~~~~~l~s~s-~dg~v~vwd~~~~~~------~--------~~~~~~~~~~~~~~~~~~~~~la~~~~ 247 (347)
.+...+.+++| |++++++.++ .++.|.+|++..... + ...........++|+|++..++++...
T Consensus 152 ~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~ 231 (361)
T 3scy_A 152 QTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEI 231 (361)
T ss_dssp CSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT
T ss_pred cCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCC
Confidence 12234567777 5777665554 478999998865431 1 112223456788998776555555557
Q ss_pred CCcEEEEeCCCCCCCCCeEEe---cCCCCCeeEEEeCCCCCeEEEEEeC-CCcEEEEEcC--CCc--cceeecCCCCeEE
Q 036314 248 DPILRIWDPRKPGTSAPVFQF---SSHNSWISACKWHNKSWFHLISASY-DGKVMLWDLR--TAW--PLSVIDSHKDKVL 319 (347)
Q Consensus 248 d~~i~iwd~~~~~~~~~~~~~---~~h~~~v~~v~~s~~~~~~l~s~s~-D~~i~lwd~~--~~~--~~~~~~~h~~~v~ 319 (347)
++.|.+||+... .......+ ..+......++|+|++.+++++... +++|.+|+++ +++ .+..+.. ...+.
T Consensus 232 ~~~v~v~~~~~g-~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~ 309 (361)
T 3scy_A 232 GGTVIAFRYADG-MLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPR 309 (361)
T ss_dssp TCEEEEEEEETT-EEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCC
T ss_pred CCeEEEEEecCC-ceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCc
Confidence 899999998632 21122222 3344557899999999864455555 6899999996 343 2333443 45678
Q ss_pred EEeecC-CCEEEEcc-CCceEEEee
Q 036314 320 CADWWR-GDSVISGG-VDSKLCVSS 342 (347)
Q Consensus 320 ~~~~~~-~~~l~s~s-~D~~v~vw~ 342 (347)
+++|+| |++|++++ .+++|.+|.
T Consensus 310 ~~~~spdg~~l~~~~~~~~~v~v~~ 334 (361)
T 3scy_A 310 NFIITPNGKYLLVACRDTNVIQIFE 334 (361)
T ss_dssp EEEECTTSCEEEEEETTTTEEEEEE
T ss_pred eEEECCCCCEEEEEECCCCCEEEEE
Confidence 899985 66666666 689999975
No 153
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.82 E-value=6.4e-19 Score=172.17 Aligned_cols=281 Identities=12% Similarity=0.064 Sum_probs=178.3
Q ss_pred eccCCCCCEEEEEecCCeEEEEcCC-CeEEEEeeccCC---ceEEEEEeecCCCceEEEEEccC---------CCcEEEE
Q 036314 29 AVDGSNPGFILTGCYDNLGRVWKAG-GVCTHILEGHCG---AVSSVNIIKSDGLKYVTVATASK---------DQTLRLW 95 (347)
Q Consensus 29 ~~~~~~~~~l~sg~~d~~i~iw~~~-~~~~~~l~~h~~---~V~~v~~~~~~~~~~~~l~s~s~---------Dg~v~~w 95 (347)
.+++++++.++..+.|++|++||.. +.+...+.+|.. .+.+++|+|++ ..|+.++. |++|++|
T Consensus 20 ~~~~s~dg~~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg----~~la~~~~~~~~~~~s~~~~i~~~ 95 (719)
T 1z68_A 20 FPNWISGQEYLHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDR----QFVYLESDYSKLWRYSYTATYYIY 95 (719)
T ss_dssp CCEESSSSEEEEECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTS----SEEEEEEEEEECSSSCEEEEEEEE
T ss_pred ccEECCCCeEEEEcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCC----CeEEEEecCceeEEeecceEEEEE
Confidence 4566654455555579999999975 566666666654 38999999954 36777766 7899999
Q ss_pred eccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccc
Q 036314 96 KFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLE 175 (347)
Q Consensus 96 d~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (347)
|+.+++.+.. ..+ ...+..++|+|||+.|+.++ |+.|++|++.++.... . .. .
T Consensus 96 d~~~g~~~~~-------~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~--l--~~------------~ 148 (719)
T 1z68_A 96 DLSNGEFVRG-------NEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQ--I--TF------------N 148 (719)
T ss_dssp ETTTTEECCS-------SCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEE--C--CC------------C
T ss_pred ECCCCccccc-------eec---CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEE--E--ec------------C
Confidence 9987753110 111 24578899999999999875 7899999987643210 0 00 0
Q ss_pred ccccccccCCccce---------EEEEe-CCCCeEEEEecCC----------------------------------cEEE
Q 036314 176 GEAISTLVGHTQCV---------SSVVW-PQQETIYSASWDH----------------------------------SVRT 211 (347)
Q Consensus 176 ~~~~~~~~~h~~~v---------~~~~~-~~~~~l~s~s~dg----------------------------------~v~v 211 (347)
+.....+.+|...+ .++.| |+++.|++++.|. .|++
T Consensus 149 ~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~ 228 (719)
T 1z68_A 149 GRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFI 228 (719)
T ss_dssp CBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEE
T ss_pred CCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEE
Confidence 00000112232222 46777 6888998887663 7889
Q ss_pred EECCCCcee--eeee-------eCeeeEEEEeeCCCCcEEEEecC--C--CcEEEEe----CCCCCCCCCeEE--ecCCC
Q 036314 212 WDVEMGKDL--SDIF-------CGKALNCIDIGGEGSALIAAGGS--D--PILRIWD----PRKPGTSAPVFQ--FSSHN 272 (347)
Q Consensus 212 wd~~~~~~~--~~~~-------~~~~~~~~~~~~~~~~~la~~~~--d--~~i~iwd----~~~~~~~~~~~~--~~~h~ 272 (347)
||+.+++.. ..+. ....+..++|+|+ +.++++... + ..|.+|| +.... ...+.. ..+|.
T Consensus 229 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD-~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~-~~~~~~~~~~~~~ 306 (719)
T 1z68_A 229 IDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTD-ERVCLQWLKRVQNVSVLSICDFREDWQTWD-CPKTQEHIEESRT 306 (719)
T ss_dssp EESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSS-SEEEEEEEESSTTEEEEEEEEECSSSSSEE-CCGGGEEEEECSS
T ss_pred EECCCCCccceeEccCCccCCCCcceEEEeEEeCC-CeEEEEEeccccCeEEEEEEcccCCCCCCc-eEEEEecccccCC
Confidence 999887642 1111 2335678899877 566665332 2 3488889 65322 211111 14677
Q ss_pred CCee-----EEEeCCCCCeEEE-EEeCCC--cEEEEEcCCCccceeecCCCCeEEEEeecCCCEEEEccC-----CceEE
Q 036314 273 SWIS-----ACKWHNKSWFHLI-SASYDG--KVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGGV-----DSKLC 339 (347)
Q Consensus 273 ~~v~-----~v~~s~~~~~~l~-s~s~D~--~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~-----D~~v~ 339 (347)
.++. .+.|+|++..+++ +...++ .|.+||+.+++ ...+..+...+..+.+++++.|+..+. ++.++
T Consensus 307 ~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~~~~~v~~~~~~d~~~i~~~~~~~~~~~~~~~ 385 (719)
T 1z68_A 307 GWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQITSGKWEAINIFRVTQDSLFYSSNEFEEYPGRRN 385 (719)
T ss_dssp SCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEECSCSSSCEEEEEEECSSEEEEEESCGGGCTTCBE
T ss_pred ceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-eEecccCceEEEEEEEEeCCEEEEEEecCCCCCceEE
Confidence 7777 8899999976444 344555 56667777665 556666666777766667776554444 47888
Q ss_pred Eeec
Q 036314 340 VSSG 343 (347)
Q Consensus 340 vw~~ 343 (347)
||..
T Consensus 386 l~~~ 389 (719)
T 1z68_A 386 IYRI 389 (719)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8863
No 154
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.82 E-value=2e-17 Score=148.05 Aligned_cols=279 Identities=11% Similarity=0.081 Sum_probs=165.3
Q ss_pred cCCceeeccCC-CCCEEEEEecC----CeEEEEcCC---CeE--EEEeeccCCceEEEEEeecCCCceEEEEEccCCCcE
Q 036314 23 HDDWVSAVDGS-NPGFILTGCYD----NLGRVWKAG---GVC--THILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTL 92 (347)
Q Consensus 23 h~~~v~~~~~~-~~~~l~sg~~d----~~i~iw~~~---~~~--~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v 92 (347)
+......++++ ++++|++++.+ +.+++|+.. +.. +..+..+......+++ ++. ..+++...+++|
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~---~l~~~~~~~~~v 122 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGK---NIVTANYSGGSI 122 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSS---EEEEEETTTTEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCC---EEEEEECCCCEE
Confidence 56667778888 45688888886 799999753 433 2334445556667776 222 344555578999
Q ss_pred EEEeccccccccCccccceeeee--------eccccceEEEEEeCCCCEEEEe-eCCCcEEEEecCCCCCCC--ccceee
Q 036314 93 RLWKFDAEELVNHPKKIRSFKIL--------RGHKASVHSIAAETSGNMVCSG-SWDCTISLWRTNDSDAAG--NQVSIK 161 (347)
Q Consensus 93 ~~wd~~~~~~~~~~~~~~~~~~~--------~~h~~~V~~v~~s~~~~~l~sg-s~Dg~I~iwd~~~~~~~~--~~~~~~ 161 (347)
.+|++.....+... ...... +.+...+++++|+|+|++++.+ ..++.|++|++....... ......
T Consensus 123 ~~~~~~~~g~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~ 199 (361)
T 3scy_A 123 TVFPIGQDGALLPA---SDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTK 199 (361)
T ss_dssp EEEEBCTTSCBCSC---SEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEE
T ss_pred EEEEeCCCCcCccc---ceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeec
Confidence 99999754322111 000001 1123346889999999966554 458999999886432100 000000
Q ss_pred eccCCCccccccccccccccccCCccceEEEEe-CCCCeEEEEe-cCCcEEEEECCCCcee--eeeee----CeeeEEEE
Q 036314 162 KRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSAS-WDHSVRTWDVEMGKDL--SDIFC----GKALNCID 233 (347)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s-~dg~v~vwd~~~~~~~--~~~~~----~~~~~~~~ 233 (347)
+........+......++| |++++++.++ .++.|.+||+.++... ..+.. ......++
T Consensus 200 --------------~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~ 265 (361)
T 3scy_A 200 --------------GTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIH 265 (361)
T ss_dssp --------------EEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEE
T ss_pred --------------ccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEE
Confidence 0000001112234567777 5777777666 6899999999866431 22211 12346888
Q ss_pred eeCCCCcEEEEecC-CCcEEEEeCCCC-CCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcC--CCccce
Q 036314 234 IGGEGSALIAAGGS-DPILRIWDPRKP-GTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLR--TAWPLS 309 (347)
Q Consensus 234 ~~~~~~~~la~~~~-d~~i~iwd~~~~-~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~--~~~~~~ 309 (347)
+++++..++++... ++.|.+|++... +....+..+.. ...+..++|+|++.+++++...++.|.+|+++ +++...
T Consensus 266 ~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~ 344 (361)
T 3scy_A 266 LSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTD 344 (361)
T ss_dssp ECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEE
T ss_pred ECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEee
Confidence 98776555455555 689999998622 22223344444 55788999999997644444478999997554 555433
Q ss_pred ee-cCCCCeEEEEeec
Q 036314 310 VI-DSHKDKVLCADWW 324 (347)
Q Consensus 310 ~~-~~h~~~v~~~~~~ 324 (347)
.. ..+...+.|+.|.
T Consensus 345 ~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 345 IKKDIKVDKPVCLKFV 360 (361)
T ss_dssp CSCCEECSSEEEEEEE
T ss_pred cceeeeCCCCeEEEEc
Confidence 32 2345678899885
No 155
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.82 E-value=2.7e-19 Score=164.46 Aligned_cols=210 Identities=13% Similarity=0.112 Sum_probs=142.7
Q ss_pred ccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CCC
Q 036314 119 KASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQ 197 (347)
Q Consensus 119 ~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~ 197 (347)
...++.+++++++.++++++.|+ +++|+..+..... ...... ....... ......+...|.+++| +++
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~------~~~~~~---~~~~~~~-~~~~~~~~~~v~~l~~spdg 104 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQN------KPGDDP---NKIVDKV-QGLLVPMKFPIHHLALSCDN 104 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCC------CTTCCT---TCEEECC-CCEEECCSSCEEEEEECTTS
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhc------ccccCc---ccccccC-ccccccCCCcccEEEEcCCC
Confidence 34577889999999999999998 9998754210000 000000 0000000 0011235567999999 577
Q ss_pred CeEE----EEecCCcEEEEECCCC--------ceeeeee----eCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCC
Q 036314 198 ETIY----SASWDHSVRTWDVEMG--------KDLSDIF----CGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGT 261 (347)
Q Consensus 198 ~~l~----s~s~dg~v~vwd~~~~--------~~~~~~~----~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~ 261 (347)
++|+ +++.|++|++||++++ +.+..+. +...+.+++|+|.++.++++++.|++|++||++..
T Consensus 105 ~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~-- 182 (434)
T 2oit_A 105 LTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTET-- 182 (434)
T ss_dssp CEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSS--
T ss_pred CEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCC--
Confidence 8888 8899999999998654 2211221 24578999998876789999999999999999853
Q ss_pred CCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCC-------CCeEEEEeecCCCE-EE-Ec
Q 036314 262 SAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSH-------KDKVLCADWWRGDS-VI-SG 332 (347)
Q Consensus 262 ~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h-------~~~v~~~~~~~~~~-l~-s~ 332 (347)
.......+|...|.+++|+|++. +|++|+.||+|++||++ ++....+..| ...|.++.|++... ++ .+
T Consensus 183 -~~~~~~~~~~~~v~~v~wspdg~-~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~ 259 (434)
T 2oit_A 183 -VKVCATLPSTVAVTSVCWSPKGK-QLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYA 259 (434)
T ss_dssp -EEEEEEECGGGCEEEEEECTTSS-CEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEE
T ss_pred -cceeeccCCCCceeEEEEcCCCC-EEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEc
Confidence 22445567889999999999986 59999999999999998 5555544433 34899999986544 43 23
Q ss_pred cCCc------eEEEeecc
Q 036314 333 GVDS------KLCVSSGV 344 (347)
Q Consensus 333 s~D~------~v~vw~~~ 344 (347)
+.|| .+++|...
T Consensus 260 ~~dg~~~~~~~v~i~~l~ 277 (434)
T 2oit_A 260 AADGTLETSPDVVMALLP 277 (434)
T ss_dssp ETTCCSSSCCEEEEEECC
T ss_pred cCCCccCCCCceEEEEec
Confidence 3343 37888753
No 156
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.80 E-value=2.4e-18 Score=164.03 Aligned_cols=233 Identities=12% Similarity=0.044 Sum_probs=159.7
Q ss_pred CCceEEEEEeecCCCceEEEEEccC-CCcEEEEeccccccccCccccceeeeeeccc-cceEEEEEeCCCCEEEEeeC--
Q 036314 64 CGAVSSVNIIKSDGLKYVTVATASK-DQTLRLWKFDAEELVNHPKKIRSFKILRGHK-ASVHSIAAETSGNMVCSGSW-- 139 (347)
Q Consensus 64 ~~~V~~v~~~~~~~~~~~~l~s~s~-Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~-~~V~~v~~s~~~~~l~sgs~-- 139 (347)
..+|.+++|+|++. .||.++. ||+++||++++++. ..+..|. ..+.+++|+|| +++++++.
T Consensus 21 ~~~~~~~~~~~DG~----~la~~s~~~g~~~lw~~~~g~~----------~~lt~~~~~~~~~~~~spd-~~l~~~~~~~ 85 (582)
T 3o4h_A 21 AVEKYSLQGVVDGD----KLLVVGFSEGSVNAYLYDGGET----------VKLNREPINSVLDPHYGVG-RVILVRDVSK 85 (582)
T ss_dssp HSCEEEEEEEETTT----EEEEEEEETTEEEEEEEETTEE----------EECCSSCCSEECEECTTCS-EEEEEEECST
T ss_pred ccchheeecCCCCC----eEEEEEccCCceeEEEEcCCCc----------EeeecccccccccccCCCC-eEEEEeccCC
Confidence 45799999999553 6887777 99999999865432 2344454 68999999999 78887775
Q ss_pred -CCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeCCCC-eEEEEecCCcEEEEECCCC
Q 036314 140 -DCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQE-TIYSASWDHSVRTWDVEMG 217 (347)
Q Consensus 140 -Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~dg~v~vwd~~~~ 217 (347)
+...++|.+....... ...+....++. +.++. ++++ .+++.+.++.+.+||+.++
T Consensus 86 g~~~~~l~~~~~~~~g~--------------------~~~l~~~~~~~--~~~~s-~dg~~~~~~s~~~~~~~l~d~~~g 142 (582)
T 3o4h_A 86 GAEQHALFKVNTSRPGE--------------------EQRLEAVKPMR--ILSGV-DTGEAVVFTGATEDRVALYALDGG 142 (582)
T ss_dssp TSCCEEEEEEETTSTTC--------------------CEECTTSCSBE--EEEEE-ECSSCEEEEEECSSCEEEEEEETT
T ss_pred CCcceEEEEEeccCCCc--------------------cccccCCCCce--eeeeC-CCCCeEEEEecCCCCceEEEccCC
Confidence 5667787654310000 00111112222 33333 3443 3444444555669999887
Q ss_pred ceeeeeeeCeeeEEEEeeCCCCcEEEEecCC----CcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeC
Q 036314 218 KDLSDIFCGKALNCIDIGGEGSALIAAGGSD----PILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASY 293 (347)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d----~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~ 293 (347)
+......... ..+.++|++ +.+++++.+ ..|++||+.... ...+..|...+..++|+|||.. |+++..
T Consensus 143 ~~~~l~~~~~--~~~~~spDG-~~la~~~~~~~~~~~i~~~d~~~g~----~~~l~~~~~~~~~~~~SpDG~~-l~~~~~ 214 (582)
T 3o4h_A 143 GLRELARLPG--FGFVSDIRG-DLIAGLGFFGGGRVSLFTSNLSSGG----LRVFDSGEGSFSSASISPGMKV-TAGLET 214 (582)
T ss_dssp EEEEEEEESS--CEEEEEEET-TEEEEEEEEETTEEEEEEEETTTCC----CEEECCSSCEEEEEEECTTSCE-EEEEEC
T ss_pred cEEEeecCCC--ceEEECCCC-CEEEEEEEcCCCCeEEEEEcCCCCC----ceEeecCCCccccceECCCCCE-EEEccC
Confidence 6543332222 677787654 566766655 789999986432 3467788888999999999965 778888
Q ss_pred CC--cEEEEEcCCCccceeecCCCCeEEEEe--------ecC-CCEEEEccCCceEEEeec
Q 036314 294 DG--KVMLWDLRTAWPLSVIDSHKDKVLCAD--------WWR-GDSVISGGVDSKLCVSSG 343 (347)
Q Consensus 294 D~--~i~lwd~~~~~~~~~~~~h~~~v~~~~--------~~~-~~~l~s~s~D~~v~vw~~ 343 (347)
++ .|++||+++++.. .+.+|...+..+. |+| |..+++++.|++++||..
T Consensus 215 ~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 215 AREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp SSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred CCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 88 8999999988766 7778887777777 985 667889999999999973
No 157
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.78 E-value=1.3e-16 Score=141.78 Aligned_cols=236 Identities=11% Similarity=0.075 Sum_probs=161.9
Q ss_pred CCceEEEEEeecCCCceEEEEEccC-------CCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEE-E
Q 036314 64 CGAVSSVNIIKSDGLKYVTVATASK-------DQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMV-C 135 (347)
Q Consensus 64 ~~~V~~v~~~~~~~~~~~~l~s~s~-------Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l-~ 135 (347)
...+..++|+++++ .|+.++. +++|.+||..+++. ...+.. ...+..++|+++|+.+ +
T Consensus 40 ~~~~~~~~~s~dg~----~l~~~~~~~~~~~~~~~v~~~d~~~~~~---------~~~~~~-~~~~~~~~~s~dg~~l~v 105 (353)
T 3vgz_A 40 GKGAYEMAYSQQEN----ALWLATSQSRKLDKGGVVYRLDPVTLEV---------TQAIHN-DLKPFGATINNTTQTLWF 105 (353)
T ss_dssp ESSEEEEEEETTTT----EEEEEECCCTTTEESEEEEEECTTTCCE---------EEEEEE-SSCCCSEEEETTTTEEEE
T ss_pred ccCccceEECCCCC----EEEEEcCCCcCCCCCccEEEEcCCCCeE---------EEEEec-CCCcceEEECCCCCEEEE
Confidence 34578899998553 3444442 67899999877643 223332 3346788999999854 5
Q ss_pred EeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCC---------ccceEEEEe-CCCCeEEEEe-
Q 036314 136 SGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGH---------TQCVSSVVW-PQQETIYSAS- 204 (347)
Q Consensus 136 sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h---------~~~v~~~~~-~~~~~l~s~s- 204 (347)
+...++.|.+||..++... ..+..+ .....+++| ++++.++.++
T Consensus 106 ~~~~~~~v~~~d~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 160 (353)
T 3vgz_A 106 GNTVNSAVTAIDAKTGEVK-------------------------GRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGI 160 (353)
T ss_dssp EETTTTEEEEEETTTCCEE-------------------------EEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEE
T ss_pred EecCCCEEEEEeCCCCeeE-------------------------EEEecCCCccccccCCCCCceEEECCCCCEEEEEec
Confidence 6666899999998764321 111111 112466776 6777776665
Q ss_pred -cCCcEEEEECCCCceeeeee-eCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEec----CCCCCeeEE
Q 036314 205 -WDHSVRTWDVEMGKDLSDIF-CGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFS----SHNSWISAC 278 (347)
Q Consensus 205 -~dg~v~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~----~h~~~v~~v 278 (347)
.++.|.+||+++++.+..+. ....+..+.+++++. .++++..++.|.+||+.... ....+. ++...+..+
T Consensus 161 ~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~-~l~~~~~~~~i~~~d~~~~~---~~~~~~~~~~~~~~~~~~~ 236 (353)
T 3vgz_A 161 GKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGK-RLYTTNADGELITIDTADNK---ILSRKKLLDDGKEHFFINI 236 (353)
T ss_dssp SSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTT-EEEEECTTSEEEEEETTTTE---EEEEEECCCSSSCCCEEEE
T ss_pred CCCceEEEEcCCCCceEEEecCCCCccceEEECCCCC-EEEEEcCCCeEEEEECCCCe---EEEEEEcCCCCCCcccceE
Confidence 47889999999988777665 344467788877655 55666779999999987532 233333 245567889
Q ss_pred EeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeecC-CCE-EEEccCCceEEEeecc
Q 036314 279 KWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDS-VISGGVDSKLCVSSGV 344 (347)
Q Consensus 279 ~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~-l~s~s~D~~v~vw~~~ 344 (347)
+|+|++.+++++...++.|.+||+++++.+..+..+. ..++.|++ |++ +++...+++|.+|+..
T Consensus 237 ~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~ 302 (353)
T 3vgz_A 237 SLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAK 302 (353)
T ss_dssp EEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS--CCCEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred EECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC--CceEEECCCCCEEEEEECCCCeEEEEECC
Confidence 9999998766666667999999999988777765433 25688875 664 5666679999999864
No 158
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.77 E-value=1.8e-16 Score=142.29 Aligned_cols=272 Identities=9% Similarity=0.036 Sum_probs=163.0
Q ss_pred EEEEEecC--CeEEEEcC---CCeEEEE--ee-ccCCceEEEEEeecCCCceEEEEEccCCCcEEEEecc-ccccccCcc
Q 036314 37 FILTGCYD--NLGRVWKA---GGVCTHI--LE-GHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFD-AEELVNHPK 107 (347)
Q Consensus 37 ~l~sg~~d--~~i~iw~~---~~~~~~~--l~-~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~-~~~~~~~~~ 107 (347)
+|+.|++. +.|.+|+. .+..... .. +....+..++|+|++ .+|++++.+ +|++|++. ++++.
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg----~~l~~~~~~-~v~~~~~~~~g~~~---- 74 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHER----KNIYGAAMK-KWSSFAVKSPTEIV---- 74 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTS----SEEEEEEBT-EEEEEEEEETTEEE----
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCC----CEEEEEccc-eEEEEEECCCCCEE----
Confidence 45556653 45777653 3443221 11 233467889999854 357788887 99999986 54321
Q ss_pred ccceeeeeeccccceEEEEEeCCCCE--EEEee-------------CCCcEEEEecCC-CCCCCccceeeeccCCCcccc
Q 036314 108 KIRSFKILRGHKASVHSIAAETSGNM--VCSGS-------------WDCTISLWRTND-SDAAGNQVSIKKRKGNNQVEE 171 (347)
Q Consensus 108 ~~~~~~~~~~h~~~V~~v~~s~~~~~--l~sgs-------------~Dg~I~iwd~~~-~~~~~~~~~~~~~~~~~~~~~ 171 (347)
.......+ +.+..++|+|||++ +++++ .++++++|++.. +...
T Consensus 75 ---~~~~~~~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~----------------- 133 (365)
T 1jof_A 75 ---HEASHPIG-GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLE----------------- 133 (365)
T ss_dssp ---EEEEEECC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEE-----------------
T ss_pred ---EeeEeecC-CCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCc-----------------
Confidence 11111111 22445889999994 55654 799999999863 2110
Q ss_pred cccccccccccc-CCccceEEEEe-CCCCeEEEEec-CCcEEEEECC-CCcee--eeee--e-CeeeEEEEeeCCCCcEE
Q 036314 172 PQLEGEAISTLV-GHTQCVSSVVW-PQQETIYSASW-DHSVRTWDVE-MGKDL--SDIF--C-GKALNCIDIGGEGSALI 242 (347)
Q Consensus 172 ~~~~~~~~~~~~-~h~~~v~~~~~-~~~~~l~s~s~-dg~v~vwd~~-~~~~~--~~~~--~-~~~~~~~~~~~~~~~~l 242 (347)
..+..+. .+...+.+++| |++++|+++.. ++.|++||+. +++.. ..+. . +..+..++++|++..++
T Consensus 134 -----~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~ 208 (365)
T 1jof_A 134 -----KNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLY 208 (365)
T ss_dssp -----EEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEE
T ss_pred -----ceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEE
Confidence 0001110 13345778887 57777776653 6799999998 66542 2222 1 34577889987765454
Q ss_pred EEecCCCcEEEEeCCCC-CCCCC----eEEec----CCCC------CeeEEE-eCCCCCeEEEEEeCCC-----cEEEEE
Q 036314 243 AAGGSDPILRIWDPRKP-GTSAP----VFQFS----SHNS------WISACK-WHNKSWFHLISASYDG-----KVMLWD 301 (347)
Q Consensus 243 a~~~~d~~i~iwd~~~~-~~~~~----~~~~~----~h~~------~v~~v~-~s~~~~~~l~s~s~D~-----~i~lwd 301 (347)
++...++.|.+|++... +.... +..+. +|.. .+..++ |+|++.+++++...+. +|.+|+
T Consensus 209 v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~ 288 (365)
T 1jof_A 209 ALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFK 288 (365)
T ss_dssp EEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEE
T ss_pred EEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEE
Confidence 55555789999986531 11100 11121 2222 578899 9999976443333333 899999
Q ss_pred cC-CCccce---eecCCCCeEEEEeecC----CCEEEEccC-CceEEEeec
Q 036314 302 LR-TAWPLS---VIDSHKDKVLCADWWR----GDSVISGGV-DSKLCVSSG 343 (347)
Q Consensus 302 ~~-~~~~~~---~~~~h~~~v~~~~~~~----~~~l~s~s~-D~~v~vw~~ 343 (347)
++ +++... ....+...+..++|+| |++|++++. +++|.||+.
T Consensus 289 ~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~ 339 (365)
T 1jof_A 289 LRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRW 339 (365)
T ss_dssp ECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEE
T ss_pred ECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEE
Confidence 96 454332 1333444566788876 788888876 489999974
No 159
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.75 E-value=1.6e-16 Score=143.25 Aligned_cols=272 Identities=10% Similarity=0.027 Sum_probs=167.0
Q ss_pred ccCC-CCCEEEEEec-CCe--EEEEcCC-CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEecccccccc
Q 036314 30 VDGS-NPGFILTGCY-DNL--GRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVN 104 (347)
Q Consensus 30 ~~~~-~~~~l~sg~~-d~~--i~iw~~~-~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~ 104 (347)
.+++ ++++|+.++. ++. +.+||+. +.......+|...+..+.|+|++ ..|+.++.++.|++||+.+++.
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg----~~l~~~~~~~~l~~~d~~~g~~-- 114 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDD----DALFYVKDGRNLMRVDLATLEE-- 114 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTS----SEEEEEETTTEEEEEETTTCCE--
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCC----CEEEEEeCCCeEEEEECCCCcc--
Confidence 7788 4668888887 674 7777875 45555566676666577899854 3688888899999999987642
Q ss_pred CccccceeeeeeccccceEEE--EEeCCCCEEEE----------------------eeCCCcEEEEecCCCCCCCcccee
Q 036314 105 HPKKIRSFKILRGHKASVHSI--AAETSGNMVCS----------------------GSWDCTISLWRTNDSDAAGNQVSI 160 (347)
Q Consensus 105 ~~~~~~~~~~~~~h~~~V~~v--~~s~~~~~l~s----------------------gs~Dg~I~iwd~~~~~~~~~~~~~ 160 (347)
...+..+...+... .+++++++++. .+.+..|.+||+.++.
T Consensus 115 -------~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~-------- 179 (388)
T 3pe7_A 115 -------NVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGE-------- 179 (388)
T ss_dssp -------EEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCC--------
T ss_pred -------eeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCc--------
Confidence 12233444444333 34899988874 2345678888876532
Q ss_pred eeccCCCccccccccccccccccCCccceEEEEe-C-CCCeEEEEecC------CcEEEEECCCCceeeeeeeC---eee
Q 036314 161 KKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-P-QQETIYSASWD------HSVRTWDVEMGKDLSDIFCG---KAL 229 (347)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~-~~~~l~s~s~d------g~v~vwd~~~~~~~~~~~~~---~~~ 229 (347)
...+..+...+..+.| | +++.|+.++.+ ..|.++|+..+.. ..+... ..+
T Consensus 180 ------------------~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~ 240 (388)
T 3pe7_A 180 ------------------STVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEGESC 240 (388)
T ss_dssp ------------------EEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTTEEE
T ss_pred ------------------eEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCCccc
Confidence 1122234445677777 6 67777776653 3677788765433 333222 245
Q ss_pred EEEEeeCCCCcEEEEecCCC----cEEEEeCCCCCCCCCeEEecCCCCC---eeEEEeCCCCCeEEEEE--------eCC
Q 036314 230 NCIDIGGEGSALIAAGGSDP----ILRIWDPRKPGTSAPVFQFSSHNSW---ISACKWHNKSWFHLISA--------SYD 294 (347)
Q Consensus 230 ~~~~~~~~~~~~la~~~~d~----~i~iwd~~~~~~~~~~~~~~~h~~~---v~~v~~s~~~~~~l~s~--------s~D 294 (347)
....|+|++..++..+..++ .|++||+.... ...+..+.++... .....|+|++..++++. ..+
T Consensus 241 ~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~-~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~ 319 (388)
T 3pe7_A 241 THEFWVPDGSALVYVSYLKGSPDRFIYSADPETLE-NRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIEND 319 (388)
T ss_dssp EEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCC-EEEEEEECCEEEEEECTTSSEEEEEECCC------------CCC
T ss_pred ccceECCCCCEEEEEecCCCCCcceEEEEecCCCc-eEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCC
Confidence 66788877665544433222 39999987532 2223333331111 12236899987644333 456
Q ss_pred CcEEEEEcCCCccceeecCCCC-----------eEEEEeecC-CCEEEEcc-CCceEEEeec
Q 036314 295 GKVMLWDLRTAWPLSVIDSHKD-----------KVLCADWWR-GDSVISGG-VDSKLCVSSG 343 (347)
Q Consensus 295 ~~i~lwd~~~~~~~~~~~~h~~-----------~v~~~~~~~-~~~l~s~s-~D~~v~vw~~ 343 (347)
..|.+||+.+++ +..+..|.. .+.++.|+| |++|+..+ .++...||..
T Consensus 320 ~~i~~~d~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~ 380 (388)
T 3pe7_A 320 PFLYVFNMKNGT-QHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLA 380 (388)
T ss_dssp CEEEEEETTTTE-EEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEE
T ss_pred CEEEEEeccCCc-eEEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEE
Confidence 789999998865 455555655 577889985 66666444 5787777753
No 160
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.75 E-value=3.7e-16 Score=151.12 Aligned_cols=281 Identities=14% Similarity=0.069 Sum_probs=177.9
Q ss_pred CCCcCCceeeccCCCCC-EEEEE--ecCCeEEEEc-CCCeEEEEeeccCCceE---------EEEEe--ecCCCceEE-E
Q 036314 20 PSLHDDWVSAVDGSNPG-FILTG--CYDNLGRVWK-AGGVCTHILEGHCGAVS---------SVNII--KSDGLKYVT-V 83 (347)
Q Consensus 20 ~~~h~~~v~~~~~~~~~-~l~sg--~~d~~i~iw~-~~~~~~~~l~~h~~~V~---------~v~~~--~~~~~~~~~-l 83 (347)
..+|...+..++++++. ++++. +.+++.+||. ..+...+.+..|...+. ...|+ |++. . |
T Consensus 19 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~----~~l 94 (662)
T 3azo_A 19 VASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGG----PLL 94 (662)
T ss_dssp HHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSS----CEE
T ss_pred HhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCC----eEE
Confidence 44688999999988554 55555 5588999998 34444566777776666 56666 6432 3 3
Q ss_pred E-EccCCCcEEEEecc--c-cccccCccccceeeeeec-----cccceEEEEEeCCCCEEEEeeCC----------CcEE
Q 036314 84 A-TASKDQTLRLWKFD--A-EELVNHPKKIRSFKILRG-----HKASVHSIAAETSGNMVCSGSWD----------CTIS 144 (347)
Q Consensus 84 ~-s~s~Dg~v~~wd~~--~-~~~~~~~~~~~~~~~~~~-----h~~~V~~v~~s~~~~~l~sgs~D----------g~I~ 144 (347)
+ +...+..|.+|++. . ++ ...+.. |...+.+++|+|||+.|+.++.| .+|+
T Consensus 95 a~~~~~~~~l~~~~~~~~g~~~----------~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~ 164 (662)
T 3azo_A 95 VFTHFGDQRLYAFEPDAPGGAV----------PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLA 164 (662)
T ss_dssp EEEBTTTCCEEEECTTSTTCCC----------CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEE
T ss_pred EEEECCCCeEEEEcCCCCCCCC----------CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEE
Confidence 4 33335666666654 2 32 122333 66778899999999999988887 5899
Q ss_pred EEecCCCCCCCccceeeeccCCCcccccccccccccccc-CCccceEEEEe-CCCCeEEEEecCC--------cEEEEEC
Q 036314 145 LWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLV-GHTQCVSSVVW-PQQETIYSASWDH--------SVRTWDV 214 (347)
Q Consensus 145 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~-~~~~~l~s~s~dg--------~v~vwd~ 214 (347)
+||+.+..... ......+. .+...+..+.| |++++|+.++.++ .|.+||+
T Consensus 165 ~~~~~~~~~~~--------------------~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~ 224 (662)
T 3azo_A 165 AVPLDGSAAAD--------------------RSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARV 224 (662)
T ss_dssp EEETTSTTTTC--------------------GGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEE
T ss_pred EEECCCCcccc--------------------CCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEE
Confidence 99886510000 00011222 33345556666 6888888877653 7999999
Q ss_pred C-CCc--eeeeeee--CeeeEEEEeeCCCCcEEEEecCCC--cEEEEeCCCCCCCCCeEEecCC-CCC--------eeEE
Q 036314 215 E-MGK--DLSDIFC--GKALNCIDIGGEGSALIAAGGSDP--ILRIWDPRKPGTSAPVFQFSSH-NSW--------ISAC 278 (347)
Q Consensus 215 ~-~~~--~~~~~~~--~~~~~~~~~~~~~~~~la~~~~d~--~i~iwd~~~~~~~~~~~~~~~h-~~~--------v~~v 278 (347)
. ++. ....+.. ...+..+.|++++. +++++..++ .|.+||+... . ...+..+ ... +..+
T Consensus 225 ~~~g~~~~~~~l~~~~~~~~~~~~~spdg~-l~~~~~~~~~~~l~~~~~~~~-~---~~~l~~~~~~~~~p~w~~~~~~~ 299 (662)
T 3azo_A 225 TEDGRFADTRTLLGGPEEAIAQAEWAPDGS-LIVATDRTGWWNLHRVDPATG-A---ATQLCRREEEFAGPLWTPGMRWF 299 (662)
T ss_dssp CTTSCEEEEEEEEEETTBCEEEEEECTTSC-EEEEECTTSSCEEEEECTTTC-C---EEESSCCSSBSSCCCCSTTCCSE
T ss_pred CCCCcccccEEeCCCCCceEcceEECCCCe-EEEEECCCCCeEEEEEECCCC-c---eeecccccccccCccccccCceE
Confidence 8 461 3333332 34567888877765 777887788 5666665322 1 2222222 221 4678
Q ss_pred EeCCCCCeEEEEEeCCCcEEEE--EcCCCccceeecCCCCeEEEE-eecCCCE-EEEccCCceEEEee
Q 036314 279 KWHNKSWFHLISASYDGKVMLW--DLRTAWPLSVIDSHKDKVLCA-DWWRGDS-VISGGVDSKLCVSS 342 (347)
Q Consensus 279 ~~s~~~~~~l~s~s~D~~i~lw--d~~~~~~~~~~~~h~~~v~~~-~~~~~~~-l~s~s~D~~v~vw~ 342 (347)
+|+|++. ++++++. +.++|| |+.+++ +..+..|.+.+..+ ++..+.. +++++.+....||.
T Consensus 300 ~~~~~~~-~~~~~~~-~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~ 364 (662)
T 3azo_A 300 APLANGL-IAVVHGK-GAAVLGILDPESGE-LVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVE 364 (662)
T ss_dssp EECTTSC-EEEEEBS-SSCEEEEEETTTTE-EEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEE
T ss_pred eEeCCCE-EEEEEEc-CccEEEEEECCCCc-EEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEE
Confidence 8888875 6888888 999999 555554 67778888888877 5544433 55666676656654
No 161
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.73 E-value=1.2e-16 Score=156.14 Aligned_cols=287 Identities=9% Similarity=-0.028 Sum_probs=168.3
Q ss_pred eeeccCC-CCCEEEEEec---------CCeEEEEcCCCeEE---EEeeccCCceEEEEEeecCCCceEEEEEccCCCcEE
Q 036314 27 VSAVDGS-NPGFILTGCY---------DNLGRVWKAGGVCT---HILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLR 93 (347)
Q Consensus 27 v~~~~~~-~~~~l~sg~~---------d~~i~iw~~~~~~~---~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~ 93 (347)
+.++++| ++++||+++. |+++++||..+... ..+ ...+..++|+|++. .|+.++ |++|+
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l---~~~~~~~~~SPDG~----~la~~~-~~~i~ 133 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL---PRPIQYLCWSPVGS----KLAYVY-QNNIY 133 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC---CSSBCCEEECSSTT----CEEEEE-TTEEE
T ss_pred eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec---CcccccceECCCCC----EEEEEE-CCeEE
Confidence 8888988 5678888876 78999999864333 233 24588899999654 466664 78999
Q ss_pred EEeccccccccCccccceeeeeeccccce---------EEEEEeCCCCEEEEeeCC-C----------------------
Q 036314 94 LWKFDAEELVNHPKKIRSFKILRGHKASV---------HSIAAETSGNMVCSGSWD-C---------------------- 141 (347)
Q Consensus 94 ~wd~~~~~~~~~~~~~~~~~~~~~h~~~V---------~~v~~s~~~~~l~sgs~D-g---------------------- 141 (347)
+|++.+++.............+.||...| .+++|+|||+.|++++.| +
T Consensus 134 ~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 213 (719)
T 1z68_A 134 LKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIP 213 (719)
T ss_dssp EESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEE
T ss_pred EEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeec
Confidence 99998765321100000001222333222 479999999999988866 2
Q ss_pred -----------cEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeC-CCCeEEEEecCC--
Q 036314 142 -----------TISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP-QQETIYSASWDH-- 207 (347)
Q Consensus 142 -----------~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~l~s~s~dg-- 207 (347)
+|++||+.++.... ...-.....+.+|...+..++|+ +++.+++....+
T Consensus 214 yp~~g~~~~~~~l~~~d~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~ 276 (719)
T 1z68_A 214 YPKAGAKNPVVRIFIIDTTYPAYVG-----------------PQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQN 276 (719)
T ss_dssp CCBTTSCCCEEEEEEEESSCHHHHC-----------------CEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTT
T ss_pred CCCCCCCCCeeEEEEEECCCCCccc-----------------eeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccC
Confidence 44455543311000 00000002345688889999995 544445533222
Q ss_pred --cEEEEE----CCCCceeeeee----e-CeeeE-----EEEeeCCCCcEEE-EecCCC--cEEEEeCCCCCCCCCeEEe
Q 036314 208 --SVRTWD----VEMGKDLSDIF----C-GKALN-----CIDIGGEGSALIA-AGGSDP--ILRIWDPRKPGTSAPVFQF 268 (347)
Q Consensus 208 --~v~vwd----~~~~~~~~~~~----~-~~~~~-----~~~~~~~~~~~la-~~~~d~--~i~iwd~~~~~~~~~~~~~ 268 (347)
.|.+|| +.+++....+. . ...+. .+.|++++..++. +...++ .|.+||+.... ...+
T Consensus 277 ~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~----~~~l 352 (719)
T 1z68_A 277 VSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN----AIQI 352 (719)
T ss_dssp EEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT----CEEC
T ss_pred eEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc----eEec
Confidence 388899 77766544331 1 12233 5678777665544 344555 56666765321 3455
Q ss_pred cCCCCCeeEEEeCCCCCeEEEEEeC----CCcEEEEEcCC--Cc-cceeec----CCCCeEEEEeecC-CCEEE-EccCC
Q 036314 269 SSHNSWISACKWHNKSWFHLISASY----DGKVMLWDLRT--AW-PLSVID----SHKDKVLCADWWR-GDSVI-SGGVD 335 (347)
Q Consensus 269 ~~h~~~v~~v~~s~~~~~~l~s~s~----D~~i~lwd~~~--~~-~~~~~~----~h~~~v~~~~~~~-~~~l~-s~s~D 335 (347)
..+...+..+.++ ++..+++++.. ++..+||.+.. +. ....+. +|...+..+.|++ +++++ +++.+
T Consensus 353 t~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~ 431 (719)
T 1z68_A 353 TSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGP 431 (719)
T ss_dssp SCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCB
T ss_pred ccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCC
Confidence 5555567777777 77665555554 58899998754 32 123332 3667788899985 56544 44433
Q ss_pred --ceEEEeec
Q 036314 336 --SKLCVSSG 343 (347)
Q Consensus 336 --~~v~vw~~ 343 (347)
..+.+|+.
T Consensus 432 ~~p~~~l~d~ 441 (719)
T 1z68_A 432 GIPISTLHDG 441 (719)
T ss_dssp SSCEEEEECS
T ss_pred CCCeEEEEEC
Confidence 35666653
No 162
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.73 E-value=3.2e-16 Score=153.66 Aligned_cols=276 Identities=11% Similarity=0.080 Sum_probs=168.1
Q ss_pred CCceeeccCCC-CCEEEEEecCCeEEEEcCC-CeEEEEeeccCCce-----EEEEEeecCCCceEEEEEccCC-------
Q 036314 24 DDWVSAVDGSN-PGFILTGCYDNLGRVWKAG-GVCTHILEGHCGAV-----SSVNIIKSDGLKYVTVATASKD------- 89 (347)
Q Consensus 24 ~~~v~~~~~~~-~~~l~sg~~d~~i~iw~~~-~~~~~~l~~h~~~V-----~~v~~~~~~~~~~~~l~s~s~D------- 89 (347)
......+++++ +.+|+++ |++|++||.. +.+...+.+|.... ..+.|+|++ ..|+.++.+
T Consensus 16 ~~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg----~~l~~~~~~~~~~r~~ 89 (740)
T 4a5s_A 16 RLKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDG----QFILLEYNYVKQWRHS 89 (740)
T ss_dssp CCCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTS----SEEEEEEEEEECSSSC
T ss_pred cccccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCC----CEEEEEECCeeeEEEc
Confidence 33455778774 4577775 9999999974 67777788887432 347788854 367888776
Q ss_pred --CcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCC
Q 036314 90 --QTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNN 167 (347)
Q Consensus 90 --g~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~ 167 (347)
+.+.+||+.++++ ..+..|...+...+|||||+.||.+ .|+.|++|++.++.... .. .
T Consensus 90 ~~~~~~~~d~~~~~~----------~~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~--lt--~----- 149 (740)
T 4a5s_A 90 YTASYDIYDLNKRQL----------ITEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYR--IT--W----- 149 (740)
T ss_dssp EEEEEEEEETTTTEE----------CCSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEE--CC--S-----
T ss_pred cceEEEEEECCCCcE----------EEcccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEE--Ec--C-----
Confidence 5566999987753 2345677889999999999999877 57899999987643210 00 0
Q ss_pred ccccccccccccccccCCcc---------ceEEEEe-CCCCeEEEEecCC------------------------------
Q 036314 168 QVEEPQLEGEAISTLVGHTQ---------CVSSVVW-PQQETIYSASWDH------------------------------ 207 (347)
Q Consensus 168 ~~~~~~~~~~~~~~~~~h~~---------~v~~~~~-~~~~~l~s~s~dg------------------------------ 207 (347)
.+.....+.++.+ ....+.| |+++.|+.++.|.
T Consensus 150 -------~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G 222 (740)
T 4a5s_A 150 -------TGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAG 222 (740)
T ss_dssp -------CCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTT
T ss_pred -------CCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCc
Confidence 0000001112211 1123556 5777777765432
Q ss_pred ------cEEEEECCC---Cc--eeeeee-------eCeeeEEEEeeCCCCcEEEEe----cCCCcEEEEeCCCCCC---C
Q 036314 208 ------SVRTWDVEM---GK--DLSDIF-------CGKALNCIDIGGEGSALIAAG----GSDPILRIWDPRKPGT---S 262 (347)
Q Consensus 208 ------~v~vwd~~~---~~--~~~~~~-------~~~~~~~~~~~~~~~~~la~~----~~d~~i~iwd~~~~~~---~ 262 (347)
+|.+||+.+ +. ....+. ....+..++|+|++. +++.. ..+..|.+||+..... .
T Consensus 223 ~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~-~~~~~~~r~~~~~~i~~~d~~tg~~~~~~ 301 (740)
T 4a5s_A 223 AVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQER-ISLQWLRRIQNYSVMDICDYDESSGRWNC 301 (740)
T ss_dssp SCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTE-EEEEEEESSTTEEEEEEEEEETTTTEEEE
T ss_pred CcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCe-EEEEEeCCCCCEEEEEEEECCCCccccce
Confidence 478899887 63 222332 223467788987654 44433 2344799999865320 0
Q ss_pred CCeEEe--cCCCCCee-----EEEeCCCCCeEEEEEe-CCC--cEEEEEcCCCccceeecCCCCeEEEEeecCCCE-EEE
Q 036314 263 APVFQF--SSHNSWIS-----ACKWHNKSWFHLISAS-YDG--KVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDS-VIS 331 (347)
Q Consensus 263 ~~~~~~--~~h~~~v~-----~v~~s~~~~~~l~s~s-~D~--~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s 331 (347)
.....+ .+|..+|. ...|+|||..++...+ .+| .|.+||+..++.. .+....-.|..+.+.++++ +.+
T Consensus 302 ~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~-~lT~g~~~v~~~~~~d~~~i~f~ 380 (740)
T 4a5s_A 302 LVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCT-FITKGTWEVIGIEALTSDYLYYI 380 (740)
T ss_dssp CGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCE-ESCCSSSCEEEEEEECSSEEEEE
T ss_pred eEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceE-ecccCCEEEEEEEEEeCCEEEEE
Confidence 111222 56777776 7899999976442555 344 6888898866544 4444455666655444654 334
Q ss_pred ccC
Q 036314 332 GGV 334 (347)
Q Consensus 332 ~s~ 334 (347)
++.
T Consensus 381 ~~~ 383 (740)
T 4a5s_A 381 SNE 383 (740)
T ss_dssp ESC
T ss_pred Eec
Confidence 433
No 163
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.73 E-value=5.9e-16 Score=136.42 Aligned_cols=238 Identities=10% Similarity=-0.020 Sum_probs=150.4
Q ss_pred ceeeccCCC-CCE-EEEEecCCeEEEEcCC-CeEEEEeec-c----CCceEEEEEeecCCCceEEEEEcc----------
Q 036314 26 WVSAVDGSN-PGF-ILTGCYDNLGRVWKAG-GVCTHILEG-H----CGAVSSVNIIKSDGLKYVTVATAS---------- 87 (347)
Q Consensus 26 ~v~~~~~~~-~~~-l~sg~~d~~i~iw~~~-~~~~~~l~~-h----~~~V~~v~~~~~~~~~~~~l~s~s---------- 87 (347)
.+..+++++ +++ +++++.++.|++||.. +..+..+.. + ...+..++|+|++. .|++++
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~----~l~~~~~~~~~~~~~~ 110 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGK----TLAIYESPVRLELTHF 110 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSS----EEEEEEEEEEECSSCE
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCC----EEEEEecccccccccc
Confidence 367788874 444 5667778999999974 555555442 2 22567889988543 466664
Q ss_pred --CCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccC
Q 036314 88 --KDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKG 165 (347)
Q Consensus 88 --~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~ 165 (347)
.++.|++||+.+++. ...+.. ...+.+++|+|+|++++.+ ++.|.+||+.+..... ......
T Consensus 111 ~~~~~~i~v~d~~~~~~---------~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~----~~~~~~ 174 (337)
T 1pby_B 111 EVQPTRVALYDAETLSR---------RKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVE----DKPIQS 174 (337)
T ss_dssp EECCCEEEEEETTTTEE---------EEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEE----EECSTT
T ss_pred cccCceEEEEECCCCcE---------EEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEee----eeeccc
Confidence 579999999976542 223332 3457788999999988877 6899999987643210 000000
Q ss_pred CCccccccccccccccccCCccceEEEEe-CCCCeEEEEe--------------cCC----------cEEEEECCCCcee
Q 036314 166 NNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSAS--------------WDH----------SVRTWDVEMGKDL 220 (347)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s--------------~dg----------~v~vwd~~~~~~~ 220 (347)
+...+ .| +++..++..+ .++ .|.+||+++++..
T Consensus 175 -------------------~~~~~---~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~ 232 (337)
T 1pby_B 175 -------------------WEAET---YAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA 232 (337)
T ss_dssp -------------------TTTTT---BCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE
T ss_pred -------------------cCCCc---eeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce
Confidence 00000 11 2222221111 111 5789999988754
Q ss_pred eeeee---CeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcE
Q 036314 221 SDIFC---GKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKV 297 (347)
Q Consensus 221 ~~~~~---~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i 297 (347)
.+.. ...+..+++++++. .++++ ++.|++||+... .....+. ....+.+++|+|++.+ |++++.|+.|
T Consensus 233 -~~~~~~~~~~~~~~~~s~dg~-~l~~~--~~~v~~~d~~~~---~~~~~~~-~~~~~~~~~~s~dg~~-l~~~~~~~~i 303 (337)
T 1pby_B 233 -MREVRIMDVFYFSTAVNPAKT-RAFGA--YNVLESFDLEKN---ASIKRVP-LPHSYYSVNVSTDGST-VWLGGALGDL 303 (337)
T ss_dssp -EEEEEECSSCEEEEEECTTSS-EEEEE--ESEEEEEETTTT---EEEEEEE-CSSCCCEEEECTTSCE-EEEESBSSEE
T ss_pred -EeecCCCCCceeeEEECCCCC-EEEEe--CCeEEEEECCCC---cCcceec-CCCceeeEEECCCCCE-EEEEcCCCcE
Confidence 2221 23456788877654 55555 799999998642 2233443 3346789999999875 6667889999
Q ss_pred EEEEcCCCccceeecCC
Q 036314 298 MLWDLRTAWPLSVIDSH 314 (347)
Q Consensus 298 ~lwd~~~~~~~~~~~~h 314 (347)
++||+++++.+..+..+
T Consensus 304 ~v~d~~~~~~~~~~~~~ 320 (337)
T 1pby_B 304 AAYDAETLEKKGQVDLP 320 (337)
T ss_dssp EEEETTTCCEEEEEECG
T ss_pred EEEECcCCcEEEEEEcC
Confidence 99999998877776544
No 164
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.71 E-value=9.2e-16 Score=137.66 Aligned_cols=248 Identities=8% Similarity=0.042 Sum_probs=151.8
Q ss_pred CceeeccCC-CCCEEEEEecCCeEEEEcC--CCeEEEEeecc-CCceEEEEEeecCCCceEEEEEcc-------------
Q 036314 25 DWVSAVDGS-NPGFILTGCYDNLGRVWKA--GGVCTHILEGH-CGAVSSVNIIKSDGLKYVTVATAS------------- 87 (347)
Q Consensus 25 ~~v~~~~~~-~~~~l~sg~~d~~i~iw~~--~~~~~~~l~~h-~~~V~~v~~~~~~~~~~~~l~s~s------------- 87 (347)
..+..++++ ++++|++++.+ .+++|+. .+......... .+.+.+++|+|++. ..++++++
T Consensus 40 ~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~--~l~~~~~~~~~~~~~~~~~~~ 116 (365)
T 1jof_A 40 EPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTR--AIFLLAAKQPPYAVYANPFYK 116 (365)
T ss_dssp CCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCE--EEEEEECSSTTCCEEEEEESS
T ss_pred CCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCC--EEEEEEecCCcceeccceeec
Confidence 356778887 45688899888 9999996 46554332211 13355677877432 11355654
Q ss_pred CCCcEEEEeccc-cccccCccccceeeeee-ccccceEEEEEeCCCCEEEEeeC-CCcEEEEecC-CCCCCCccceeeec
Q 036314 88 KDQTLRLWKFDA-EELVNHPKKIRSFKILR-GHKASVHSIAAETSGNMVCSGSW-DCTISLWRTN-DSDAAGNQVSIKKR 163 (347)
Q Consensus 88 ~Dg~v~~wd~~~-~~~~~~~~~~~~~~~~~-~h~~~V~~v~~s~~~~~l~sgs~-Dg~I~iwd~~-~~~~~~~~~~~~~~ 163 (347)
.++++++|++.. +++. ..+..+. .+...+.+++|+|||++++++.. ++.|++|++. ++...
T Consensus 117 ~~g~v~v~~~~~~g~~~------~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~--------- 181 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLE------KNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVE--------- 181 (365)
T ss_dssp SCCEEEEEEECTTCCEE------EEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEE---------
T ss_pred CCceEEEEccCCCCcCc------ceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEE---------
Confidence 689999999963 3321 1111111 24567899999999998887654 6899999986 33110
Q ss_pred cCCCcccccccccccccccc--CCccceEEEEe-CCCCeEEEEec-CCcEEEEECC--CCceee---eee---eC----e
Q 036314 164 KGNNQVEEPQLEGEAISTLV--GHTQCVSSVVW-PQQETIYSASW-DHSVRTWDVE--MGKDLS---DIF---CG----K 227 (347)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~--~h~~~v~~~~~-~~~~~l~s~s~-dg~v~vwd~~--~~~~~~---~~~---~~----~ 227 (347)
.+..+. .|...+..++| |+++++++++. +++|.+|++. +++... .+. .. .
T Consensus 182 --------------~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~ 247 (365)
T 1jof_A 182 --------------LVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRD 247 (365)
T ss_dssp --------------EEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBC
T ss_pred --------------EeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcc
Confidence 011111 12345677887 57778877765 6899999764 454321 121 11 1
Q ss_pred -------eeEEEE-eeCCCCcEEEEecCCC-----cEEEEeCCCCCCCCCeE-EecCCCCCeeEEEeCC---CCCeEEEE
Q 036314 228 -------ALNCID-IGGEGSALIAAGGSDP-----ILRIWDPRKPGTSAPVF-QFSSHNSWISACKWHN---KSWFHLIS 290 (347)
Q Consensus 228 -------~~~~~~-~~~~~~~~la~~~~d~-----~i~iwd~~~~~~~~~~~-~~~~h~~~v~~v~~s~---~~~~~l~s 290 (347)
.+..++ ++|++..++++...++ .|++|++...+....+. ....+......++|+| ++.+ |++
T Consensus 248 ~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~-l~v 326 (365)
T 1jof_A 248 PETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEW-MAI 326 (365)
T ss_dssp TTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTE-EEE
T ss_pred cccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCE-EEE
Confidence 366788 8776554444332233 89999986322211111 1333555667889999 7765 666
Q ss_pred EeC-CCcEEEEEcCCC
Q 036314 291 ASY-DGKVMLWDLRTA 305 (347)
Q Consensus 291 ~s~-D~~i~lwd~~~~ 305 (347)
++. +++|++|+++..
T Consensus 327 ~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 327 TDDQEGWLEIYRWKDE 342 (365)
T ss_dssp ECSSSCEEEEEEEETT
T ss_pred EEcCCCeEEEEEEchh
Confidence 665 589999999764
No 165
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.70 E-value=4.1e-14 Score=122.21 Aligned_cols=241 Identities=12% Similarity=0.168 Sum_probs=160.7
Q ss_pred CCCcCCceeeccCC-CCCEEEEEecCCeEEEEcCCCeEEEEee------ccCCceEEEEEeecCCCceEEEEEcc-CCCc
Q 036314 20 PSLHDDWVSAVDGS-NPGFILTGCYDNLGRVWKAGGVCTHILE------GHCGAVSSVNIIKSDGLKYVTVATAS-KDQT 91 (347)
Q Consensus 20 ~~~h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~~~~~~~l~------~h~~~V~~v~~~~~~~~~~~~l~s~s-~Dg~ 91 (347)
..+|-..+.+++++ ++.++++...++.|++||..+.....+. +|...+..+++.+.++ ..+++.. .++.
T Consensus 25 ~~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g---~l~v~~~~~~~~ 101 (286)
T 1q7f_A 25 MEGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSG---DIIVTERSPTHQ 101 (286)
T ss_dssp STTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTT---EEEEEECGGGCE
T ss_pred CCCccCCCceEEECCCCCEEEEECCCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCC---eEEEEcCCCCCE
Confidence 34566778888877 4668888888999999998887766654 2445678888853332 3445443 3889
Q ss_pred EEEEeccccccccCccccceeeeee-ccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccc
Q 036314 92 LRLWKFDAEELVNHPKKIRSFKILR-GHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVE 170 (347)
Q Consensus 92 v~~wd~~~~~~~~~~~~~~~~~~~~-~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~ 170 (347)
|++||.+ ++. +..+. .+...+.+++++++|+++++...++.|.+|+....
T Consensus 102 i~~~d~~-g~~---------~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~------------------- 152 (286)
T 1q7f_A 102 IQIYNQY-GQF---------VRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGN------------------- 152 (286)
T ss_dssp EEEECTT-SCE---------EEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSC-------------------
T ss_pred EEEECCC-CcE---------EEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCC-------------------
Confidence 9999943 321 22222 34456889999999998888888999999985321
Q ss_pred cccccccccccc--cCCccceEEEEeC-CCCeEEEEecCCcEEEEECCCCceeeeeeeC---eeeEEEEeeCCCCcEEEE
Q 036314 171 EPQLEGEAISTL--VGHTQCVSSVVWP-QQETIYSASWDHSVRTWDVEMGKDLSDIFCG---KALNCIDIGGEGSALIAA 244 (347)
Q Consensus 171 ~~~~~~~~~~~~--~~h~~~v~~~~~~-~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~la~ 244 (347)
.+..+ .++...+..+++. ++..+++.+.++.|++||.. +..+..+... ..+..+++++++ .++++
T Consensus 153 -------~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G-~l~v~ 223 (286)
T 1q7f_A 153 -------VLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNG-EILIA 223 (286)
T ss_dssp -------EEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTC-CEEEE
T ss_pred -------EEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCC-CEEEE
Confidence 01111 1233456778875 45555666678999999974 4444444322 346778887654 67777
Q ss_pred ecCCC-cEEEEeCCCCCCCCCeEEecCCC--CCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCcc
Q 036314 245 GGSDP-ILRIWDPRKPGTSAPVFQFSSHN--SWISACKWHNKSWFHLISASYDGKVMLWDLRTAWP 307 (347)
Q Consensus 245 ~~~d~-~i~iwd~~~~~~~~~~~~~~~h~--~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~ 307 (347)
...++ .|.+||... . .+..+..+. ..+.+++++|++ .++++ +.|++|++|++....+
T Consensus 224 ~~~~~~~i~~~~~~g--~--~~~~~~~~~~~~~~~~i~~~~~g-~l~vs-~~~~~v~v~~~~~~~p 283 (286)
T 1q7f_A 224 DNHNNFNLTIFTQDG--Q--LISALESKVKHAQCFDVALMDDG-SVVLA-SKDYRLYIYRYVQLAP 283 (286)
T ss_dssp ECSSSCEEEEECTTS--C--EEEEEEESSCCSCEEEEEEETTT-EEEEE-ETTTEEEEEECSCCCC
T ss_pred eCCCCEEEEEECCCC--C--EEEEEcccCCCCcceeEEECCCC-cEEEE-CCCCeEEEEEcccccc
Confidence 76675 999999642 2 234444433 347789999988 45555 6799999999876544
No 166
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.67 E-value=1.5e-13 Score=121.43 Aligned_cols=245 Identities=13% Similarity=0.058 Sum_probs=163.0
Q ss_pred CceEEEEEeecCCCceEEEEEccCC------------------------CcEEEEeccccccccCccccceeeeee-ccc
Q 036314 65 GAVSSVNIIKSDGLKYVTVATASKD------------------------QTLRLWKFDAEELVNHPKKIRSFKILR-GHK 119 (347)
Q Consensus 65 ~~V~~v~~~~~~~~~~~~l~s~s~D------------------------g~v~~wd~~~~~~~~~~~~~~~~~~~~-~h~ 119 (347)
+.+.+|++.+++ ..+++.+.+ ++|.+||..++++. ..+. ++-
T Consensus 24 ~~v~~va~d~~G----~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~---------~~~~~~~~ 90 (329)
T 3fvz_A 24 GQVSGVALDSKN----NLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEIL---------QSSGKNLF 90 (329)
T ss_dssp SCEEEEEECTTC----CEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEE---------EEECTTTC
T ss_pred CCceEEEECCCC----CEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEE---------eccCCCcc
Confidence 457778887743 245666655 57999998766532 1222 344
Q ss_pred cceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeC--CC
Q 036314 120 ASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP--QQ 197 (347)
Q Consensus 120 ~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~ 197 (347)
.....++++++|+++++...++.|++|+...... ......... ..+ .-.++-.....+++. ++
T Consensus 91 ~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~---~~~~~~~~~--------~~g----~~~~~~~~P~~ia~~~~~g 155 (329)
T 3fvz_A 91 YLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEG---PLLILGRSM--------QPG----SDQNHFCQPTDVAVEPSTG 155 (329)
T ss_dssp SSEEEEEECTTSCEEEEETTTTEEEEECTTCSSC---CSEEESBTT--------BCC----CSTTCCSSEEEEEECTTTC
T ss_pred CCceEEEECCCCCEEEEECCCCEEEEEeCCCCeE---EEEEecccC--------CCC----CCccccCCCcEEEEeCCCC
Confidence 5788999999999999999999999998653210 000000000 000 001233456788885 45
Q ss_pred CeEEEEe-cCCcEEEEECCCCceeeeeee-C----------eeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCe
Q 036314 198 ETIYSAS-WDHSVRTWDVEMGKDLSDIFC-G----------KALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPV 265 (347)
Q Consensus 198 ~~l~s~s-~dg~v~vwd~~~~~~~~~~~~-~----------~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~ 265 (347)
..+++.+ .++.|++|| .++..+..+.. + ..+..++++++++.++++...++.|++||+... . .+
T Consensus 156 ~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G-~--~~ 231 (329)
T 3fvz_A 156 AVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTK-E--FV 231 (329)
T ss_dssp CEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTC-C--EE
T ss_pred eEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCC-c--EE
Confidence 5556655 589999999 55665554421 1 126788888776778888888999999998632 2 23
Q ss_pred EEe--cCCCCCeeEEEeCCCCCeEEEEEe-------CCCcEEEEEcCCCccceee---cCCCCeEEEEeecC-CCEEEEc
Q 036314 266 FQF--SSHNSWISACKWHNKSWFHLISAS-------YDGKVMLWDLRTAWPLSVI---DSHKDKVLCADWWR-GDSVISG 332 (347)
Q Consensus 266 ~~~--~~h~~~v~~v~~s~~~~~~l~s~s-------~D~~i~lwd~~~~~~~~~~---~~h~~~v~~~~~~~-~~~l~s~ 332 (347)
..+ ..+...+..++|+| + ..+++.+ .+.+|++||..+++.+..+ .+|...+.++++++ |..+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~p-g-~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad 309 (329)
T 3fvz_A 232 REIKHASFGRNVFAISYIP-G-FLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGD 309 (329)
T ss_dssp EEECCTTTTTCEEEEEEET-T-EEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEE
T ss_pred EEEeccccCCCcceeeecC-C-EEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEE
Confidence 344 45667788999999 3 3333332 3458999999999888777 36777889999975 6678888
Q ss_pred cCCceEEEeec
Q 036314 333 GVDSKLCVSSG 343 (347)
Q Consensus 333 s~D~~v~vw~~ 343 (347)
..+++|++|+.
T Consensus 310 ~~~~~I~~~~~ 320 (329)
T 3fvz_A 310 AHTNTVWKFTL 320 (329)
T ss_dssp SSSCCEEEEEE
T ss_pred CCCCEEEEEeC
Confidence 89999999975
No 167
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.67 E-value=5.3e-14 Score=124.23 Aligned_cols=270 Identities=11% Similarity=0.075 Sum_probs=169.9
Q ss_pred CceeeccCCC-CCEEEEEecCCeEEEEcCCCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccc
Q 036314 25 DWVSAVDGSN-PGFILTGCYDNLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELV 103 (347)
Q Consensus 25 ~~v~~~~~~~-~~~l~sg~~d~~i~iw~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~ 103 (347)
..|.+++++. ...+++.+.++.++.| .+.....+.++...+.+++|.+++ ..++++..++.|.+||.++++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g----~l~~~~~~~~~i~~~d~~~~~~- 78 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTI--TAEPWLEISKKGLQLEGLNFDRQG----QLFLLDVFEGNIFKINPETKEI- 78 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEE--ECEEEEEEESSCCCEEEEEECTTS----CEEEEETTTCEEEEECTTTCCE-
T ss_pred cccceeeecCCccceeEEeecccCccc--ccceeEEEeccCccccCcEECCCC----CEEEEECCCCEEEEEeCCCCcE-
Confidence 3467788874 3456666788899999 355566677777778899998743 3566788899999999876542
Q ss_pred cCccccceeeeeeccccceEEEEEeCCCCEEEEeeCC----CcEEEEecCCCCCCCccceeeeccCCCcccccccccccc
Q 036314 104 NHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWD----CTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAI 179 (347)
Q Consensus 104 ~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~D----g~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (347)
...+..+...+.+++++++|+++++...+ +.|.+||....... ..+
T Consensus 79 --------~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~----------------------~~~ 128 (333)
T 2dg1_A 79 --------KRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQ----------------------DII 128 (333)
T ss_dssp --------EEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCE----------------------EEE
T ss_pred --------EEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEE----------------------EEE
Confidence 11122456779999999999988877766 68999987643210 000
Q ss_pred ccccCCccceEEEEeC-CCCeEEEEec------CCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEE
Q 036314 180 STLVGHTQCVSSVVWP-QQETIYSASW------DHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILR 252 (347)
Q Consensus 180 ~~~~~h~~~v~~~~~~-~~~~l~s~s~------dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~ 252 (347)
.-..+...+..+++. ++..+++... .+.|..+|...++.............+++++++..++++...++.|.
T Consensus 129 -~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~ 207 (333)
T 2dg1_A 129 -EDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLH 207 (333)
T ss_dssp -CSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEE
T ss_pred -ccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEE
Confidence 001123456777774 5555555443 24566666554433221111223567888776554666666788999
Q ss_pred EEeCCCCCCCCC------eEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCC------eEEE
Q 036314 253 IWDPRKPGTSAP------VFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKD------KVLC 320 (347)
Q Consensus 253 iwd~~~~~~~~~------~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~------~v~~ 320 (347)
+||++..+.... ...+.++ ..+..+++++++. +.++...++.|.+||.+ ++.+..+..+.. .+.+
T Consensus 208 ~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~-l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~g~~~~~~~ 284 (333)
T 2dg1_A 208 RIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDN-LYVAMYGQGRVLVFNKR-GYPIGQILIPGRDEGHMLRSTH 284 (333)
T ss_dssp EEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCC-EEEEEETTTEEEEECTT-SCEEEEEECTTGGGTCSCBCCE
T ss_pred EEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCC-EEEEEcCCCEEEEECCC-CCEEEEEEcCCCccccccCcce
Confidence 999853221110 0112222 4677899999985 56666678899999984 555555543332 6788
Q ss_pred EeecC-CCEEEEccCC
Q 036314 321 ADWWR-GDSVISGGVD 335 (347)
Q Consensus 321 ~~~~~-~~~l~s~s~D 335 (347)
++|++ ++.|..++.+
T Consensus 285 ~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 285 PQFIPGTNQLIICSND 300 (333)
T ss_dssp EEECTTSCEEEEEEEC
T ss_pred EEECCCCCEEEEEeCc
Confidence 99975 4565443433
No 168
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.66 E-value=1.1e-13 Score=122.25 Aligned_cols=247 Identities=13% Similarity=0.049 Sum_probs=163.6
Q ss_pred CCceeeccCC-CCCEEEEEecC------------------------CeEEEEcCC-CeEEEEee-ccCCceEEEEEeecC
Q 036314 24 DDWVSAVDGS-NPGFILTGCYD------------------------NLGRVWKAG-GVCTHILE-GHCGAVSSVNIIKSD 76 (347)
Q Consensus 24 ~~~v~~~~~~-~~~~l~sg~~d------------------------~~i~iw~~~-~~~~~~l~-~h~~~V~~v~~~~~~ 76 (347)
-+.+.+++++ +++++++.+.+ ++|.+||.. +.....+. ++-.....+++.+++
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 4668889987 46678887777 479999985 77665554 454678899998744
Q ss_pred CCceEEEEEccCCCcEEEEeccccccccCccccceeeee---------eccccceEEEEEeC-CCCEEEEee-CCCcEEE
Q 036314 77 GLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKIL---------RGHKASVHSIAAET-SGNMVCSGS-WDCTISL 145 (347)
Q Consensus 77 ~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~---------~~h~~~V~~v~~s~-~~~~l~sgs-~Dg~I~i 145 (347)
..+++.+.++.|++|+.+.... .+..+ .++-.....++++| ++.++++.+ .++.|++
T Consensus 103 ----~l~v~d~~~~~v~~~~~~g~~~--------~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~ 170 (329)
T 3fvz_A 103 ----NYWVTDVALHQVFKLDPHSKEG--------PLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQ 170 (329)
T ss_dssp ----CEEEEETTTTEEEEECTTCSSC--------CSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEE
T ss_pred ----CEEEEECCCCEEEEEeCCCCeE--------EEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEE
Confidence 3678888899999999764310 11122 23455688999999 788888887 6999999
Q ss_pred EecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CC-CCeEEEEecCCcEEEEECCCCceeeee
Q 036314 146 WRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQ-QETIYSASWDHSVRTWDVEMGKDLSDI 223 (347)
Q Consensus 146 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~-~~~l~s~s~dg~v~vwd~~~~~~~~~~ 223 (347)
|+.. +.. .......... .....++-.....+++ ++ +..+++...++.|++||..+++.+..+
T Consensus 171 ~~~~-g~~----~~~~~~~g~~-----------~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~ 234 (329)
T 3fvz_A 171 FSPS-GKF----VTQWGEESSG-----------SSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREI 234 (329)
T ss_dssp ECTT-SCE----EEEECEECCS-----------SSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred EcCC-CCE----EEEeccCCCC-----------CCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEE
Confidence 9843 211 1000000000 0000112233567777 45 455667777889999999878877666
Q ss_pred ee---CeeeEEEEeeCCCCcEEEEe-------cCCCcEEEEeCCCCCCCCCeEEe---cCCCCCeeEEEeCCCCCeEEEE
Q 036314 224 FC---GKALNCIDIGGEGSALIAAG-------GSDPILRIWDPRKPGTSAPVFQF---SSHNSWISACKWHNKSWFHLIS 290 (347)
Q Consensus 224 ~~---~~~~~~~~~~~~~~~~la~~-------~~d~~i~iwd~~~~~~~~~~~~~---~~h~~~v~~v~~s~~~~~~l~s 290 (347)
.. ...+..+++.| +..+++. ..+..|++||+... ..+..+ .++......++++|++ .++++
T Consensus 235 ~~~~~~~~~~~~~~~p--g~~~~~~g~~~v~~~~~~~v~~~~~~~g---~~~~~~~~~~~~~~~p~~ia~~~dG-~lyva 308 (329)
T 3fvz_A 235 KHASFGRNVFAISYIP--GFLFAVNGKPYFGDQEPVQGFVMNFSSG---EIIDVFKPVRKHFDMPHDIVASEDG-TVYIG 308 (329)
T ss_dssp CCTTTTTCEEEEEEET--TEEEEEECCCCTTCSCCCCEEEEETTTC---CEEEEECCSSSCCSSEEEEEECTTS-EEEEE
T ss_pred eccccCCCcceeeecC--CEEEEeCCCEEeccCCCcEEEEEEcCCC---eEEEEEcCCCCccCCeeEEEECCCC-CEEEE
Confidence 32 23456677765 2333332 33458999998643 224444 3677789999999998 67888
Q ss_pred EeCCCcEEEEEcCC
Q 036314 291 ASYDGKVMLWDLRT 304 (347)
Q Consensus 291 ~s~D~~i~lwd~~~ 304 (347)
...+++|++|+++.
T Consensus 309 d~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 309 DAHTNTVWKFTLTE 322 (329)
T ss_dssp ESSSCCEEEEEEEE
T ss_pred ECCCCEEEEEeCCc
Confidence 88999999999864
No 169
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.64 E-value=1.2e-13 Score=122.42 Aligned_cols=256 Identities=11% Similarity=0.100 Sum_probs=152.9
Q ss_pred CceeeccCCCCCEEEEE---------ecCCeEEEEcCCCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCC---Cc-
Q 036314 25 DWVSAVDGSNPGFILTG---------CYDNLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKD---QT- 91 (347)
Q Consensus 25 ~~v~~~~~~~~~~l~sg---------~~d~~i~iw~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~D---g~- 91 (347)
..+..+++ ++..|+.. +.++.+.+|+..+...+.+ ..+..+.|+|++. .|+..+.+ +.
T Consensus 15 ~~~~~~~~-dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l----~~~~~~~~SpDg~----~la~~~~~~~~~~~ 85 (347)
T 2gop_A 15 AYLSDPRT-KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI----ENATMPRISPDGK----KIAFMRANEEKKVS 85 (347)
T ss_dssp CEEEEEEE-ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE----ESCEEEEECTTSS----EEEEEEEETTTTEE
T ss_pred EEcccceE-CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc----ccCCCeEECCCCC----EEEEEEeccCCCcc
Confidence 45666666 77766653 2366889999764333444 4578899999553 46655543 33
Q ss_pred -EEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCC---------------------------CcE
Q 036314 92 -LRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWD---------------------------CTI 143 (347)
Q Consensus 92 -v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~D---------------------------g~I 143 (347)
|.+|++.+++. . .+..+.. +..++|+|||+.|+.++.+ ..|
T Consensus 86 ~l~~~~~~~g~~---------~-~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l 154 (347)
T 2gop_A 86 EIWVADLETLSS---------K-KILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTF 154 (347)
T ss_dssp EEEEEETTTTEE---------E-EEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEE
T ss_pred eEEEEECCCCce---------E-EEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceE
Confidence 66777765432 1 2222333 8899999999988877643 457
Q ss_pred EEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CCCCeEEEEecCC-------cEEEEECC
Q 036314 144 SLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDH-------SVRTWDVE 215 (347)
Q Consensus 144 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg-------~v~vwd~~ 215 (347)
.+||+.++. .+..+.. . .+..+.| |++ .++++..+. ...||.+.
T Consensus 155 ~~~d~~~~~-------------------------~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d 206 (347)
T 2gop_A 155 WIFDTESEE-------------------------VIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE 206 (347)
T ss_dssp EEEETTTTE-------------------------EEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE
T ss_pred EEEECCCCe-------------------------EEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeC
Confidence 777765431 1011222 1 4456666 566 666665542 34555444
Q ss_pred CCceeeeeeeCeeeEEEEeeCCCCcEEEEecC-------CCcEEEEeCCCCCCCCCeEEecCCCCCeeE-EEeCCCCCeE
Q 036314 216 MGKDLSDIFCGKALNCIDIGGEGSALIAAGGS-------DPILRIWDPRKPGTSAPVFQFSSHNSWISA-CKWHNKSWFH 287 (347)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~-------d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~-v~~s~~~~~~ 287 (347)
+++ ...+....... .++|++..++..+.. ...|.+|| . +. ......+|...+.. +.|+ ++ +
T Consensus 207 ~~~-~~~l~~~~~~~--~~spdg~~l~~~~~~~~~~~~~~~~l~~~d-~--~~--~~~l~~~~~~~~~~~~~~s-dg--~ 275 (347)
T 2gop_A 207 DGK-EEKMFEKVSFY--AVDSDGERILLYGKPEKKYMSEHNKLYIYD-G--KE--VMGILDEVDRGVGQAKIKD-GK--V 275 (347)
T ss_dssp TTE-EEEEEEEESEE--EEEECSSCEEEEECCSSSCCCSSCEEEEEC-S--SC--EEESSTTCCSEEEEEEEET-TE--E
T ss_pred CCc-eEEeccCccee--eECCCCCEEEEEEccccCCccccceEEEEC-C--Cc--eEeccccCCcccCCccEEc-Cc--E
Confidence 443 33333222222 335555444433322 24688888 2 22 12233455667776 8998 76 6
Q ss_pred EEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeecCCCEEEEccCCceE-EEee
Q 036314 288 LISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGGVDSKL-CVSS 342 (347)
Q Consensus 288 l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~D~~v-~vw~ 342 (347)
+++++.++.++|| +++++. ..+..+.+.|.++.|++ ..+++++.+++. .||.
T Consensus 276 ~~~~~~~~~~~l~-~~~g~~-~~~~~~~~~v~~~~~s~-~~~~~~~~~~~~~~l~~ 328 (347)
T 2gop_A 276 YFTLFEEGSVNLY-IWDGEI-KPIAKGRHWIMGFDVDE-IVVYLKETATRLRELFT 328 (347)
T ss_dssp EEEEEETTEEEEE-EESSSE-EEEECSSSEEEEEEESS-SEEEEEECSSSCCEEEE
T ss_pred EEEEecCCcEEEE-EcCCce-EEEecCCCeEEeeeeeC-cEEEEEcCCCChHHheE
Confidence 8899999999999 885543 44445678899999999 777777766654 6664
No 170
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.63 E-value=5e-13 Score=115.36 Aligned_cols=234 Identities=11% Similarity=0.163 Sum_probs=156.1
Q ss_pred ccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeee------eccccceEEEEE-eCCCCEE
Q 036314 62 GHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKIL------RGHKASVHSIAA-ETSGNMV 134 (347)
Q Consensus 62 ~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~------~~h~~~V~~v~~-s~~~~~l 134 (347)
+|-..+.++++.+++ ..+++.+.++.|++||.+.. . ...+ .+|...+..+++ .++++++
T Consensus 27 g~~~~p~~v~~~~~g----~l~v~~~~~~~i~~~d~~g~-~---------~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~ 92 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQN----DIIVADTNNHRIQIFDKEGR-F---------KFQFGECGKRDSQLLYPNRVAVVRNSGDII 92 (286)
T ss_dssp TCBSCEEEEEECTTC----CEEEEEGGGTEEEEECTTSC-E---------EEEECCBSSSTTCBSSEEEEEEETTTTEEE
T ss_pred CccCCCceEEECCCC----CEEEEECCCCEEEEECCCCc-E---------EEEecccCCCcccccCceEEEEEcCCCeEE
Confidence 444567889888743 35777788999999997632 1 1112 234567889999 4777777
Q ss_pred EEeeC-CCcEEEEecCCCCCCCccceeeeccCCCcccccccccccccccc-CCccceEEEEe-CCCCeEEEEecCCcEEE
Q 036314 135 CSGSW-DCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLV-GHTQCVSSVVW-PQQETIYSASWDHSVRT 211 (347)
Q Consensus 135 ~sgs~-Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~-~~~~~l~s~s~dg~v~v 211 (347)
++... ++.|++|+.. +. .+..+. .+...+.++++ ++++.+++...++.|.+
T Consensus 93 v~~~~~~~~i~~~d~~-g~-------------------------~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~ 146 (286)
T 1q7f_A 93 VTERSPTHQIQIYNQY-GQ-------------------------FVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVII 146 (286)
T ss_dssp EEECGGGCEEEEECTT-SC-------------------------EEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEE
T ss_pred EEcCCCCCEEEEECCC-Cc-------------------------EEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEE
Confidence 76643 8999999832 21 111111 12335677877 46666666667889999
Q ss_pred EECCCCceeeeeee---CeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCC--CCCeeEEEeCCCCCe
Q 036314 212 WDVEMGKDLSDIFC---GKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSH--NSWISACKWHNKSWF 286 (347)
Q Consensus 212 wd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h--~~~v~~v~~s~~~~~ 286 (347)
||.. ++.+..+.. ...+..+++.++ +.++++...++.|++||... ..+..+..+ ......++++|++.
T Consensus 147 ~~~~-g~~~~~~~~~~~~~~p~~i~~~~~-g~l~v~~~~~~~i~~~~~~g----~~~~~~~~~g~~~~p~~i~~d~~G~- 219 (286)
T 1q7f_A 147 FDQN-GNVLHKFGCSKHLEFPNGVVVNDK-QEIFISDNRAHCVKVFNYEG----QYLRQIGGEGITNYPIGVGINSNGE- 219 (286)
T ss_dssp ECTT-SCEEEEEECTTTCSSEEEEEECSS-SEEEEEEGGGTEEEEEETTC----CEEEEESCTTTSCSEEEEEECTTCC-
T ss_pred EcCC-CCEEEEeCCCCccCCcEEEEECCC-CCEEEEECCCCEEEEEcCCC----CEEEEEccCCccCCCcEEEECCCCC-
Confidence 9954 554444432 124678888765 45777777789999999742 124445433 36788999999984
Q ss_pred EEEEEeCCC-cEEEEEcCCCccceeecCCC--CeEEEEeecC-CCEEEEccCCceEEEeecc
Q 036314 287 HLISASYDG-KVMLWDLRTAWPLSVIDSHK--DKVLCADWWR-GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 287 ~l~s~s~D~-~i~lwd~~~~~~~~~~~~h~--~~v~~~~~~~-~~~l~s~s~D~~v~vw~~~ 344 (347)
++++...++ .|.+||.+ ++.+..+..+. ..+.++++.+ |+.+++ +.|++|++|+-.
T Consensus 220 l~v~~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~ 279 (286)
T 1q7f_A 220 ILIADNHNNFNLTIFTQD-GQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYV 279 (286)
T ss_dssp EEEEECSSSCEEEEECTT-SCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECS
T ss_pred EEEEeCCCCEEEEEECCC-CCEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEcc
Confidence 577777775 99999964 55566665443 3477899975 555666 679999999865
No 171
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.63 E-value=6.3e-14 Score=125.52 Aligned_cols=256 Identities=11% Similarity=0.034 Sum_probs=159.3
Q ss_pred cCCeEEEEcC-CCeEEEEeeccCCceEEEEEeecCCCceEEEEEcc----------CCCcEEEEeccccccccCccccce
Q 036314 43 YDNLGRVWKA-GGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATAS----------KDQTLRLWKFDAEELVNHPKKIRS 111 (347)
Q Consensus 43 ~d~~i~iw~~-~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s----------~Dg~v~~wd~~~~~~~~~~~~~~~ 111 (347)
.|++|.+||. .++.+..+..+..+ .++|+|++. +|+.++ .+++|.+||+.+.+.
T Consensus 29 ~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~----~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~--------- 93 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGK----KIYTMTTYHERITRGKRSDVVEVWDADKLTF--------- 93 (361)
T ss_dssp GGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSS----EEEEEEEEETTSSSSCEEEEEEEEETTTCCE---------
T ss_pred ccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCC----EEEEEEecccccccCCCCCEEEEEECcCCcE---------
Confidence 4789999996 46666677766554 899998543 455554 367899999876543
Q ss_pred eeeeec------cccceEEEEEeCCCCEEEEeeC--CCcEEEEecCCCCCCCccceeeeccCCCcccccccccccccc-c
Q 036314 112 FKILRG------HKASVHSIAAETSGNMVCSGSW--DCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAIST-L 182 (347)
Q Consensus 112 ~~~~~~------h~~~V~~v~~s~~~~~l~sgs~--Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 182 (347)
...+.. +......++|+|||++|++++. +++|.+||+.+... +.. +
T Consensus 94 ~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~-------------------------~~~~i 148 (361)
T 2oiz_A 94 EKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDY-------------------------VEDVT 148 (361)
T ss_dssp EEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEE-------------------------EEEEG
T ss_pred EEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcE-------------------------EEEEe
Confidence 222221 2234567899999999998874 68999999876421 112 1
Q ss_pred cCCccceEEEEeCCC-CeEEEEecCCcEEEEECCC-Cceeeeee------eCeeeEEEEeeCCCCcEEEEecCCCcEEEE
Q 036314 183 VGHTQCVSSVVWPQQ-ETIYSASWDHSVRTWDVEM-GKDLSDIF------CGKALNCIDIGGEGSALIAAGGSDPILRIW 254 (347)
Q Consensus 183 ~~h~~~v~~~~~~~~-~~l~s~s~dg~v~vwd~~~-~~~~~~~~------~~~~~~~~~~~~~~~~~la~~~~d~~i~iw 254 (347)
. +..+.....+|++ ..+++.+.||.+.+|++.. ++...... .......+...+++ ..++..+.++.+.++
T Consensus 149 ~-~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~v~v~ 226 (361)
T 2oiz_A 149 A-AAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDK-DKAHFVSYYGNVYSA 226 (361)
T ss_dssp G-GTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECS-SEEEEEBTTSEEEEE
T ss_pred c-CCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccC-CEEEEEeCCCeEEEE
Confidence 1 1111112235654 5678889999999999865 44331111 01101111112233 334445578899999
Q ss_pred eCCCCCCCCCeEEecC------CCC----CeeEEEeCCCCCeEEEEEeC----------CCcEEEEEcCCCccceeecCC
Q 036314 255 DPRKPGTSAPVFQFSS------HNS----WISACKWHNKSWFHLISASY----------DGKVMLWDLRTAWPLSVIDSH 314 (347)
Q Consensus 255 d~~~~~~~~~~~~~~~------h~~----~v~~v~~s~~~~~~l~s~s~----------D~~i~lwd~~~~~~~~~~~~h 314 (347)
|+.... ......+.- +.. ...-++|+|++.+.+++.+. +.+|.+||+++++.+.++..+
T Consensus 227 d~~~~~-~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~ 305 (361)
T 2oiz_A 227 DFSGDE-VKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGR 305 (361)
T ss_dssp ECSSSS-CEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECT
T ss_pred EecCCC-ceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecC
Confidence 986321 111111110 111 11126889998775655541 348999999999999998877
Q ss_pred CCeEEEEeecC-CCEEEEccCCceEEEeecc
Q 036314 315 KDKVLCADWWR-GDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 315 ~~~v~~~~~~~-~~~l~s~s~D~~v~vw~~~ 344 (347)
. +.+++|+| |++|++++. ++|.||+..
T Consensus 306 ~--p~~ia~spdg~~l~v~n~-~~v~v~D~~ 333 (361)
T 2oiz_A 306 D--ALSMTIDQQRNLMLTLDG-GNVNVYDIS 333 (361)
T ss_dssp T--CCEEEEETTTTEEEEECS-SCEEEEECS
T ss_pred C--eeEEEECCCCCEEEEeCC-CeEEEEECC
Confidence 6 89999985 778777776 999999854
No 172
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.62 E-value=1.4e-14 Score=142.08 Aligned_cols=233 Identities=10% Similarity=0.102 Sum_probs=148.4
Q ss_pred CceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccc-----eEEEEEeCCCCEEEEeeC
Q 036314 65 GAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKAS-----VHSIAAETSGNMVCSGSW 139 (347)
Q Consensus 65 ~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~-----V~~v~~s~~~~~l~sgs~ 139 (347)
....++.|++++ ..++++ |++|++||+.+++. ...+.+|... ..+++|||||++|+.++.
T Consensus 17 ~~~~~~~w~~dg----~~~~~~--~~~i~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~ 81 (740)
T 4a5s_A 17 LKLYSLRWISDH----EYLYKQ--ENNILVFNAEYGNS---------SVFLENSTFDEFGHSINDYSISPDGQFILLEYN 81 (740)
T ss_dssp CCCCCEEECSSS----EEEEEE--TTEEEEEETTTCCE---------EEEECTTTTTTCCSCCCEEEECTTSSEEEEEEE
T ss_pred ccccccEECCCC----cEEEEc--CCcEEEEECCCCce---------EEEEechhhhhhcccccceEECCCCCEEEEEEC
Confidence 345688999843 467775 99999999987652 2345555433 234788999999998887
Q ss_pred C---------CcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CCCCeEEEEecCCcE
Q 036314 140 D---------CTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSV 209 (347)
Q Consensus 140 D---------g~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v 209 (347)
+ +.+.+||+.++. ...+..|...+...+| |+++.|+.+ .|+.|
T Consensus 82 ~~~~~r~~~~~~~~~~d~~~~~--------------------------~~~l~~~~~~~~~~~~SPdG~~la~~-~~~~i 134 (740)
T 4a5s_A 82 YVKQWRHSYTASYDIYDLNKRQ--------------------------LITEERIPNNTQWVTWSPVGHKLAYV-WNNDI 134 (740)
T ss_dssp EEECSSSCEEEEEEEEETTTTE--------------------------ECCSSCCCTTEEEEEECSSTTCEEEE-ETTEE
T ss_pred CeeeEEEccceEEEEEECCCCc--------------------------EEEcccCCCcceeeEECCCCCEEEEE-ECCeE
Confidence 7 456699987642 2234456667888888 678888887 47899
Q ss_pred EEEECCCCceeeeeeeCee-------------------eEEEEeeCCCCcEEEEecCC-C--------------------
Q 036314 210 RTWDVEMGKDLSDIFCGKA-------------------LNCIDIGGEGSALIAAGGSD-P-------------------- 249 (347)
Q Consensus 210 ~vwd~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~la~~~~d-~-------------------- 249 (347)
.+||+.++........+.. ...+.|+|++ ..||....| .
T Consensus 135 ~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg-~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~ 213 (740)
T 4a5s_A 135 YVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNG-TFLAYAQFNDTEVPLIEYSFYSDESLQYPKT 213 (740)
T ss_dssp EEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTS-SEEEEEEEECTTCCEEEEEECCSTTCSSCEE
T ss_pred EEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCC-CEEEEEEEcccCCceEEEEeecCCCCCCCcc
Confidence 9999988764332111110 1236787655 455554321 1
Q ss_pred ---------------cEEEEeCCC---CCCCCCeEEec------CCCCCeeEEEeCCCCCeEEEEEe----CCCcEEEEE
Q 036314 250 ---------------ILRIWDPRK---PGTSAPVFQFS------SHNSWISACKWHNKSWFHLISAS----YDGKVMLWD 301 (347)
Q Consensus 250 ---------------~i~iwd~~~---~~~~~~~~~~~------~h~~~v~~v~~s~~~~~~l~s~s----~D~~i~lwd 301 (347)
.|++||+.. ... .....+. +|..++.+++|+||+.. ++... .+..|++||
T Consensus 214 ~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~wspdg~~-~~~~~~r~~~~~~i~~~d 291 (740)
T 4a5s_A 214 VRVPYPKAGAVNPTVKFFVVNTDSLSSVTN-ATSIQITAPASMLIGDHYLCDVTWATQERI-SLQWLRRIQNYSVMDICD 291 (740)
T ss_dssp EEEECCBTTSCCCEEEEEEEETTSCCSSSC-CCEEEECCCHHHHTSCEEEEEEEEEETTEE-EEEEEESSTTEEEEEEEE
T ss_pred eeecCCCCcCcCCeeEEEEEECCCCCCCCc-ceEEEecCCccCCCCCeEEEEEEEeCCCeE-EEEEeCCCCCEEEEEEEE
Confidence 577888764 311 1233343 37888999999999863 44432 234799999
Q ss_pred cCCCc----c--ceee--cCCCCeEE-----EEeecC-CCEEE-Ecc-CC--ceEEEee
Q 036314 302 LRTAW----P--LSVI--DSHKDKVL-----CADWWR-GDSVI-SGG-VD--SKLCVSS 342 (347)
Q Consensus 302 ~~~~~----~--~~~~--~~h~~~v~-----~~~~~~-~~~l~-s~s-~D--~~v~vw~ 342 (347)
+.+++ + +..+ ++|.+-|. .+.|+| |+.|+ ..+ .+ ..|.+|+
T Consensus 292 ~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~ 350 (740)
T 4a5s_A 292 YDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQ 350 (740)
T ss_dssp EETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEE
T ss_pred CCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEE
Confidence 99887 2 2223 45554443 678985 66665 554 34 4566665
No 173
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.62 E-value=9.1e-14 Score=125.19 Aligned_cols=249 Identities=8% Similarity=-0.049 Sum_probs=149.7
Q ss_pred CCeEEEEeeccCCceEE-----EEEeecCCCceEEEEEccC-CCc--EEEEeccccccccCccccceeeeeeccccceEE
Q 036314 53 GGVCTHILEGHCGAVSS-----VNIIKSDGLKYVTVATASK-DQT--LRLWKFDAEELVNHPKKIRSFKILRGHKASVHS 124 (347)
Q Consensus 53 ~~~~~~~l~~h~~~V~~-----v~~~~~~~~~~~~l~s~s~-Dg~--v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~ 124 (347)
.+..+..+..|...... .+|+|++ ..|+.++. ++. |.+||+.+++. .....+|...+..
T Consensus 19 ~g~~~~~lt~~~~~~~~~~~~~~~~SpDg----~~l~~~~~~~g~~~l~~~d~~~g~~---------~~lt~~~~~~~~~ 85 (388)
T 3pe7_A 19 TGAQVTRLTPPDVTCHRNYFYQKCFTRDG----SKLLFGGAFDGPWNYYLLDLNTQVA---------TQLTEGRGDNTFG 85 (388)
T ss_dssp TCCEEEECSCTTSCEECCCTTSCCBCTTS----CEEEEEECTTSSCEEEEEETTTCEE---------EECCCSSCBCSSS
T ss_pred CCcceEEecCCcccccchhhcCccCCCCC----CEEEEEEcCCCCceEEEEeCCCCce---------EEeeeCCCCCccc
Confidence 46677788888876666 7788854 35666666 774 77778776542 2333455555556
Q ss_pred EEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEE---eCCCCeEE
Q 036314 125 IAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVV---WPQQETIY 201 (347)
Q Consensus 125 v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~---~~~~~~l~ 201 (347)
++|+|||+.|+.++.++.|++||+.++.. ...+..+...+.... -+++..++
T Consensus 86 ~~~spdg~~l~~~~~~~~l~~~d~~~g~~-------------------------~~~~~~~~~~~~~~~~~~~~dg~~l~ 140 (388)
T 3pe7_A 86 GFLSPDDDALFYVKDGRNLMRVDLATLEE-------------------------NVVYQVPAEWVGYGTWVANSDCTKLV 140 (388)
T ss_dssp CEECTTSSEEEEEETTTEEEEEETTTCCE-------------------------EEEEECCTTEEEEEEEEECTTSSEEE
T ss_pred eEEcCCCCEEEEEeCCCeEEEEECCCCcc-------------------------eeeeechhhcccccceeECCCCCeec
Confidence 78999999999999999999999876431 111122222232222 24556555
Q ss_pred EE----------------------ecCCcEEEEECCCCceeeeeeeCeeeEEEEeeC-CCCcEEEEecC------CCcEE
Q 036314 202 SA----------------------SWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGG-EGSALIAAGGS------DPILR 252 (347)
Q Consensus 202 s~----------------------s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~la~~~~------d~~i~ 252 (347)
.. ..+..|.+||+.+++..........+..+.++| ++ ..|+.... ...|.
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg-~~l~~~~~~~~~~~~~~l~ 219 (388)
T 3pe7_A 141 GIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDD-STVAFCHEGPHDLVDARMW 219 (388)
T ss_dssp EEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEE-EEEEEEECSCTTTSSCSEE
T ss_pred cccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCccccccEECCCCC-CEEEEEEecCCCCCcceEE
Confidence 32 244679999999886544333444567888887 54 45544443 33788
Q ss_pred EEeCCCCCCCCCeEEecCCC--CCeeEEEeCCCCCeEEEEEeCCC----cEEEEEcCCCccc--eeecCCCCeE---EEE
Q 036314 253 IWDPRKPGTSAPVFQFSSHN--SWISACKWHNKSWFHLISASYDG----KVMLWDLRTAWPL--SVIDSHKDKV---LCA 321 (347)
Q Consensus 253 iwd~~~~~~~~~~~~~~~h~--~~v~~v~~s~~~~~~l~s~s~D~----~i~lwd~~~~~~~--~~~~~h~~~v---~~~ 321 (347)
++|+... . ...+..+. ..+....|+||+..++..+..++ .|.+||+++++.. ..+.++.... ...
T Consensus 220 ~~d~~~~-~---~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~ 295 (388)
T 3pe7_A 220 LINEDGT-N---MRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGS 295 (388)
T ss_dssp EEETTSC-C---CEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSS
T ss_pred EEeCCCC-c---eEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCC
Confidence 8887532 1 23444444 35778899999976433333322 3999999987642 2233211110 112
Q ss_pred eecC-CCEEEEc---------cCCceEEEeecc
Q 036314 322 DWWR-GDSVISG---------GVDSKLCVSSGV 344 (347)
Q Consensus 322 ~~~~-~~~l~s~---------s~D~~v~vw~~~ 344 (347)
.|+| |++|+.. ..+..|.+|+..
T Consensus 296 ~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~ 328 (388)
T 3pe7_A 296 LMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMK 328 (388)
T ss_dssp EEEEEECCC------------CCCCEEEEEETT
T ss_pred eEccCCCcceeEeeeccccccCCCCEEEEEecc
Confidence 5764 6665532 456789998753
No 174
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.61 E-value=4.7e-14 Score=127.21 Aligned_cols=272 Identities=8% Similarity=-0.040 Sum_probs=157.6
Q ss_pred CCceeeccCC-CCCEEEEEecC---CeEEEEcCCCeEEEEeeccCCceE-EEEEeecCCCceEEEEEccCCCcEEEEecc
Q 036314 24 DDWVSAVDGS-NPGFILTGCYD---NLGRVWKAGGVCTHILEGHCGAVS-SVNIIKSDGLKYVTVATASKDQTLRLWKFD 98 (347)
Q Consensus 24 ~~~v~~~~~~-~~~~l~sg~~d---~~i~iw~~~~~~~~~l~~h~~~V~-~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~ 98 (347)
...+..++++ ++++|+..+.+ ..+.+|+..+.....+..+...+. .+.|+|++ ..|+..+.++.|.+||+.
T Consensus 35 ~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg----~~l~~~~~~~~l~~~d~~ 110 (396)
T 3c5m_A 35 RNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDE----RAFFYVKNELNLMKVDLE 110 (396)
T ss_dssp CCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTS----SEEEEEETTTEEEEEETT
T ss_pred ceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCC----CEEEEEEcCCcEEEEECC
Confidence 3447788888 45677766443 367778876544444544444333 37788854 368888888899999987
Q ss_pred ccccccCccccceeeeeeccccceEE-------------------EEEeCCCCEEEEe-----eCCCcEEEEecCCCCCC
Q 036314 99 AEELVNHPKKIRSFKILRGHKASVHS-------------------IAAETSGNMVCSG-----SWDCTISLWRTNDSDAA 154 (347)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~h~~~V~~-------------------v~~s~~~~~l~sg-----s~Dg~I~iwd~~~~~~~ 154 (347)
+++.. ..+..+...... +.++|+++.++.. ..+..|.+||+.++..
T Consensus 111 ~~~~~---------~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~- 180 (396)
T 3c5m_A 111 TLEEQ---------VIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGEL- 180 (396)
T ss_dssp TCCEE---------EEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCE-
T ss_pred CCCcE---------EEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcE-
Confidence 65421 112222221111 2456677665543 3566788887764321
Q ss_pred CccceeeeccCCCccccccccccccccccCCccceEEEEe-C-CCCeEEEEecC------CcEEEEECCCCceeeeeee-
Q 036314 155 GNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-P-QQETIYSASWD------HSVRTWDVEMGKDLSDIFC- 225 (347)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~-~~~~l~s~s~d------g~v~vwd~~~~~~~~~~~~- 225 (347)
..+..+...+..+.| | +++.|+..+.+ ..|.+||+..+.. ..+..
T Consensus 181 -------------------------~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~ 234 (396)
T 3c5m_A 181 -------------------------EVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNV-RKIKEH 234 (396)
T ss_dssp -------------------------EEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCC-EESSCC
T ss_pred -------------------------EeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCce-eEeecc
Confidence 111223445667777 4 46666665543 3588888865542 22222
Q ss_pred --CeeeEEEEeeCCCCcEEEEecCC----CcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCC-CCCeEEEEEe------
Q 036314 226 --GKALNCIDIGGEGSALIAAGGSD----PILRIWDPRKPGTSAPVFQFSSHNSWISACKWHN-KSWFHLISAS------ 292 (347)
Q Consensus 226 --~~~~~~~~~~~~~~~~la~~~~d----~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~-~~~~~l~s~s------ 292 (347)
...+..+.|+|++..++.++..+ +.|++||+.... ...+..... .. +.|+| ++. +|+.++
T Consensus 235 ~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~----~~~l~~~~~-~~-~~~s~~dg~-~l~~~~~~~p~~ 307 (396)
T 3c5m_A 235 AEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLE----NEEVMVMPP-CS-HLMSNFDGS-LMVGDGCDAPVD 307 (396)
T ss_dssp CTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCC----EEEEEECCS-EE-EEEECSSSS-EEEEEECCC---
T ss_pred CCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCC----eEEeeeCCC-CC-CCccCCCCc-eEEEecCCccee
Confidence 22466778887765554443221 449999986432 122221112 23 88999 887 466544
Q ss_pred ----------CCCcEEEEEcCCCccceeecCCCC-----------eEEEEeecC-CCEEEEcc-CCceEEEeec
Q 036314 293 ----------YDGKVMLWDLRTAWPLSVIDSHKD-----------KVLCADWWR-GDSVISGG-VDSKLCVSSG 343 (347)
Q Consensus 293 ----------~D~~i~lwd~~~~~~~~~~~~h~~-----------~v~~~~~~~-~~~l~s~s-~D~~v~vw~~ 343 (347)
.+..|.+||+.+++. ..+..|.. .+..+.|++ |++|+.++ .++...||..
T Consensus 308 ~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~ 380 (396)
T 3c5m_A 308 VADADSYNIENDPFLYVLNTKAKSA-QKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIA 380 (396)
T ss_dssp -------CCCCCCEEEEEETTTTBC-CEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEE
T ss_pred eccccccccCCCCcEEEEecccCce-EEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEE
Confidence 347899999987764 44555544 245678875 66766555 4666667653
No 175
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.60 E-value=7.6e-14 Score=134.89 Aligned_cols=241 Identities=10% Similarity=0.045 Sum_probs=151.8
Q ss_pred EeeccCCceEEEEEeecCCCceEEEEEc--cCCCcEEEEeccccccccCccccceeeeeeccccceE---------EEEE
Q 036314 59 ILEGHCGAVSSVNIIKSDGLKYVTVATA--SKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVH---------SIAA 127 (347)
Q Consensus 59 ~l~~h~~~V~~v~~~~~~~~~~~~l~s~--s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~---------~v~~ 127 (347)
.+.+|...|..++|++ +...+++. +.+++.+||.+..+. ....+..|...+. ..+|
T Consensus 18 ~~~~~~~~~~~~~~s~----~~~~~~~~~~~~~~~~~l~~~~~~~---------~~~~l~~~~~~~~~~~~~~~~~~~~~ 84 (662)
T 3azo_A 18 LVASRSGRPACVGAVG----DEVWWVAPRPAEAGRATLVRRRADG---------AEESALPAPWNVRNRVFEYSGFPWAG 84 (662)
T ss_dssp HHHHTCSCCEEEEEET----TEEEEEEEETTTTTEEEEEEECTTS---------CEEESSCTTCCBCCCGGGTCCCCEEE
T ss_pred HHhhcCCccceeEEcC----CeEEEEecCcccCCcEEEEEECCCC---------CcceeCCCCccccccccccCCcccee
Confidence 4667889999999986 33455666 678899999863221 1233445555555 5555
Q ss_pred e--CCCCE-EEEee-CCCcEEEEecC--C-CCCCCccceeeeccCCCccccccccccccccccC-----CccceEEEEe-
Q 036314 128 E--TSGNM-VCSGS-WDCTISLWRTN--D-SDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVG-----HTQCVSSVVW- 194 (347)
Q Consensus 128 s--~~~~~-l~sgs-~Dg~I~iwd~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----h~~~v~~~~~- 194 (347)
+ |||+. |+.++ .+..|.++++. . .. ...+.. |...+..++|
T Consensus 85 ~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~--------------------------~~~l~~~~~~~~~~~~~~~~~s 138 (662)
T 3azo_A 85 VPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAV--------------------------PRPLTPVSAVGGGLRWADPVLL 138 (662)
T ss_dssp ECCSSSSCEEEEEBTTTCCEEEECTTSTTCCC--------------------------CEECSCCCCSTTCEEEEEEEEE
T ss_pred eeecCCCeEEEEEECCCCeEEEEcCCCCCCCC--------------------------CEeccCCccCCCCccccCcEEC
Confidence 5 99988 66444 35556666543 1 11 112222 4556777888
Q ss_pred CCCCeEEEEecC----------CcEEEEECCC------Cceeeeee-e-CeeeEEEEeeCCCCcEEEEecCC--------
Q 036314 195 PQQETIYSASWD----------HSVRTWDVEM------GKDLSDIF-C-GKALNCIDIGGEGSALIAAGGSD-------- 248 (347)
Q Consensus 195 ~~~~~l~s~s~d----------g~v~vwd~~~------~~~~~~~~-~-~~~~~~~~~~~~~~~~la~~~~d-------- 248 (347)
|+++.|++++.| ..|.+||+.+ +.. ..+. . ...+..+.++|++. .|+..+.+
T Consensus 139 pDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~-~la~~~~~~~~~~~~~ 216 (662)
T 3azo_A 139 PERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGR-QAVWLAWDHPRMPWEG 216 (662)
T ss_dssp TTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSS-EEEEEEECTTCCTTTC
T ss_pred CCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce-eEEEecCCCcccCceECCCCC-EEEEEECCCCCCCCCC
Confidence 688899988877 5899999987 443 3333 2 33455677876654 55554433
Q ss_pred CcEEEEeCCCCCCC-CCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCC--cEEEEEcCCCccceeecCCCCe--------
Q 036314 249 PILRIWDPRKPGTS-APVFQFSSHNSWISACKWHNKSWFHLISASYDG--KVMLWDLRTAWPLSVIDSHKDK-------- 317 (347)
Q Consensus 249 ~~i~iwd~~~~~~~-~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~--~i~lwd~~~~~~~~~~~~h~~~-------- 317 (347)
..|++||+...+.. .......+|...+..+.|+||+. ++++++.|+ .|.+||+.+++.......+.+.
T Consensus 217 ~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~-l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~ 295 (662)
T 3azo_A 217 TELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGS-LIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPG 295 (662)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSC-EEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTT
T ss_pred cEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCe-EEEEECCCCCeEEEEEECCCCceeecccccccccCcccccc
Confidence 47999998732210 12223345577899999999997 788888888 4555566555543333333222
Q ss_pred EEEEeecC-CCEEEEccCCceEEEee
Q 036314 318 VLCADWWR-GDSVISGGVDSKLCVSS 342 (347)
Q Consensus 318 v~~~~~~~-~~~l~s~s~D~~v~vw~ 342 (347)
+.+++|++ +..+++++. ++++||.
T Consensus 296 ~~~~~~~~~~~~~~~~~~-~~~~l~~ 320 (662)
T 3azo_A 296 MRWFAPLANGLIAVVHGK-GAAVLGI 320 (662)
T ss_dssp CCSEEECTTSCEEEEEBS-SSCEEEE
T ss_pred CceEeEeCCCEEEEEEEc-CccEEEE
Confidence 45677875 567788888 9999994
No 176
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.60 E-value=2.6e-13 Score=132.06 Aligned_cols=270 Identities=9% Similarity=-0.010 Sum_probs=166.7
Q ss_pred CCCEEEEEecCC---eEEEEcC---CCeEEEEee------ccCCceEEEEEeecCCCceEEEE-----EccCCCcEEEEe
Q 036314 34 NPGFILTGCYDN---LGRVWKA---GGVCTHILE------GHCGAVSSVNIIKSDGLKYVTVA-----TASKDQTLRLWK 96 (347)
Q Consensus 34 ~~~~l~sg~~d~---~i~iw~~---~~~~~~~l~------~h~~~V~~v~~~~~~~~~~~~l~-----s~s~Dg~v~~wd 96 (347)
+|++++....++ ...+|.. .+.....+. +|...+.+++|+|++. .|| +|+.+.+|++||
T Consensus 78 dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~----~la~~~~~~G~~~~~i~v~d 153 (695)
T 2bkl_A 78 RNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGK----KVAFAQKPNAADEAVLHVID 153 (695)
T ss_dssp ETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSS----EEEEEEEETTCSCCEEEEEE
T ss_pred ECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCC----EEEEEECCCCCceEEEEEEE
Confidence 466666665544 4566642 233333332 4555788999998543 566 666678999999
Q ss_pred ccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCc-------------EEEEecCCCCCCCccceeeec
Q 036314 97 FDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCT-------------ISLWRTNDSDAAGNQVSIKKR 163 (347)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~-------------I~iwd~~~~~~~~~~~~~~~~ 163 (347)
+.+++... ...+.... ...++|+|||+.|+.++.|.. |++|++.++...
T Consensus 154 l~tg~~~~-------~~~~~~~~--~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~--------- 215 (695)
T 2bkl_A 154 VDSGEWSK-------VDVIEGGK--YATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSK--------- 215 (695)
T ss_dssp TTTCCBCS-------SCCBSCCT--TCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGG---------
T ss_pred CCCCCCcC-------CcccCccc--ccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchh---------
Confidence 98876420 00111111 156899999999999998877 999998754211
Q ss_pred cCCCccccccccccccccccCCccceEEEEe-CCCCeEEEEecCC----cEEEEECCCCceeeeeee-CeeeEEEEeeCC
Q 036314 164 KGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDH----SVRTWDVEMGKDLSDIFC-GKALNCIDIGGE 237 (347)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg----~v~vwd~~~~~~~~~~~~-~~~~~~~~~~~~ 237 (347)
...+.....|...+..+.| +++++|+.++.++ .|.+||..++. ...+.. ........+ ++
T Consensus 216 ------------~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~~~~~-~~ 281 (695)
T 2bkl_A 216 ------------DTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD-FRLLVKGVGAKYEVHA-WK 281 (695)
T ss_dssp ------------CEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS-CEEEEECSSCCEEEEE-ET
T ss_pred ------------ceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc-eEEeecCCCceEEEEe-cC
Confidence 0112223345556777777 5788887777666 56677665543 333332 223333333 45
Q ss_pred CCcEEEEec---CCCcEEEEeCCCCCCCCCeEEecCC--CCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcC-CCccceee
Q 036314 238 GSALIAAGG---SDPILRIWDPRKPGTSAPVFQFSSH--NSWISACKWHNKSWFHLISASYDGKVMLWDLR-TAWPLSVI 311 (347)
Q Consensus 238 ~~~~la~~~---~d~~i~iwd~~~~~~~~~~~~~~~h--~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~-~~~~~~~~ 311 (347)
+. +++.+. .++.|.+||+..+.. .....+-.| ...+..+.|+ + ..++++...|+..+||.++ ++.....+
T Consensus 282 g~-l~~~s~~~~~~~~l~~~d~~~~~~-~~~~~l~~~~~~~~l~~~~~~-~-~~lv~~~~~dg~~~l~~~~~~g~~~~~l 357 (695)
T 2bkl_A 282 DR-FYVLTDEGAPRQRVFEVDPAKPAR-ASWKEIVPEDSSASLLSVSIV-G-GHLSLEYLKDATSEVRVATLKGKPVRTV 357 (695)
T ss_dssp TE-EEEEECTTCTTCEEEEEBTTBCSG-GGCEEEECCCSSCEEEEEEEE-T-TEEEEEEEETTEEEEEEEETTCCEEEEC
T ss_pred Cc-EEEEECCCCCCCEEEEEeCCCCCc-cCCeEEecCCCCCeEEEEEEE-C-CEEEEEEEECCEEEEEEEeCCCCeeEEe
Confidence 55 555544 358999999864321 112333333 4457788887 3 3678999999998888665 35545555
Q ss_pred cCC-CCeEEEEeecC-CCEEE----EccCCceEEEeec
Q 036314 312 DSH-KDKVLCADWWR-GDSVI----SGGVDSKLCVSSG 343 (347)
Q Consensus 312 ~~h-~~~v~~~~~~~-~~~l~----s~s~D~~v~vw~~ 343 (347)
..+ .+.+..+.+++ ++.|+ +...+++|.+|+.
T Consensus 358 ~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~ 395 (695)
T 2bkl_A 358 QLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSV 395 (695)
T ss_dssp CCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEET
T ss_pred cCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEEC
Confidence 544 66777888875 55655 5556788999974
No 177
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.60 E-value=2.1e-13 Score=120.70 Aligned_cols=263 Identities=8% Similarity=-0.104 Sum_probs=142.0
Q ss_pred ceeeccCCC-CCE-EEEEecCCeEEEEcCC-CeEEEEeec-c-----CCceEEEEEeecCCCceEEEEEccCC-------
Q 036314 26 WVSAVDGSN-PGF-ILTGCYDNLGRVWKAG-GVCTHILEG-H-----CGAVSSVNIIKSDGLKYVTVATASKD------- 89 (347)
Q Consensus 26 ~v~~~~~~~-~~~-l~sg~~d~~i~iw~~~-~~~~~~l~~-h-----~~~V~~v~~~~~~~~~~~~l~s~s~D------- 89 (347)
.+..+++++ +++ +++++.+++|++||.. +..+..+.. + ...+..++|+|++. .|++++.+
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~----~l~~~~~~~~~~~~~ 119 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGK----EVYATVNPTQRLNDH 119 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSS----EEEEEEEEEEECSSC
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCC----EEEEEcccccccccc
Confidence 456677774 554 5566678999999975 555555542 2 23367889998543 57777755
Q ss_pred -----CcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeecc
Q 036314 90 -----QTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRK 164 (347)
Q Consensus 90 -----g~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~ 164 (347)
++|.+||+.+++... .+..+. +...+.+++|+|+|+ ++.++. .|++||+.+...... ....
T Consensus 120 ~~~~~~~i~~~d~~~~~~~~------~~~~~~-~~~~~~~~~~s~dg~-l~~~~~--~i~~~d~~~~~~~~~----~~~~ 185 (349)
T 1jmx_B 120 YVVKPPRLEVFSTADGLEAK------PVRTFP-MPRQVYLMRAADDGS-LYVAGP--DIYKMDVKTGKYTVA----LPLR 185 (349)
T ss_dssp EEECCCEEEEEEGGGGGGBC------CSEEEE-CCSSCCCEEECTTSC-EEEESS--SEEEECTTTCCEEEE----ECST
T ss_pred cccCCCeEEEEECCCccccc------eeeecc-CCCcccceeECCCCc-EEEccC--cEEEEeCCCCceecc----cccc
Confidence 899999998754321 222333 334588899999999 555544 499999876532110 0000
Q ss_pred CCCccccccccccccccccCCcc---ceEEEEeC-CCCeE-EEEecCCcEEEEECCCCceeeeee---eCeeeEEEEeeC
Q 036314 165 GNNQVEEPQLEGEAISTLVGHTQ---CVSSVVWP-QQETI-YSASWDHSVRTWDVEMGKDLSDIF---CGKALNCIDIGG 236 (347)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~h~~---~v~~~~~~-~~~~l-~s~s~dg~v~vwd~~~~~~~~~~~---~~~~~~~~~~~~ 236 (347)
..........+............ ....+.+. ++... ........+..+|..+++. ..+. ....+..+.+++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~sp 264 (349)
T 1jmx_B 186 NWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKT-HTQEFADLTELYFTGLRSP 264 (349)
T ss_dssp TCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCE-EEEEEEECSSCEEEEEECS
T ss_pred ccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcE-EecccccCCCcceeeEecC
Confidence 00000000000000000000000 11223332 11000 0000111122244444331 1111 223456778877
Q ss_pred CCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCC
Q 036314 237 EGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSH 314 (347)
Q Consensus 237 ~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h 314 (347)
.++..++++ ++.|.+||+... .....+. ....+.+++|+|++.+ |++++.++.|++||+++++.+..+..+
T Consensus 265 ~dg~~l~~~--~~~v~~~d~~~~---~~~~~~~-~~~~~~~~~~s~dg~~-l~~~~~~~~v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 265 KDPNQIYGV--LNRLAKYDLKQR---KLIKAAN-LDHTYYCVAFDKKGDK-LYLGGTFNDLAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp SCTTEEEEE--ESEEEEEETTTT---EEEEEEE-CSSCCCEEEECSSSSC-EEEESBSSEEEEEETTTTEEEEEEECS
T ss_pred CCCCEEEEE--cCeEEEEECccC---eEEEEEc-CCCCccceEECCCCCE-EEEecCCCeEEEEeccccceeeeeecC
Confidence 234456655 889999998742 2233443 2345778999999876 566788899999999988877766543
No 178
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.59 E-value=1.9e-12 Score=126.21 Aligned_cols=251 Identities=10% Similarity=-0.045 Sum_probs=157.3
Q ss_pred CcCCceeeccCC-CCCEEEEEecCC-----eEEEEcCC-CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCc---
Q 036314 22 LHDDWVSAVDGS-NPGFILTGCYDN-----LGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQT--- 91 (347)
Q Consensus 22 ~h~~~v~~~~~~-~~~~l~sg~~d~-----~i~iw~~~-~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~--- 91 (347)
+|+..+..+++| ++++||.++.++ +|++||+. +..+.....+ ..+..++|+|++. .|+.++.|+.
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~----~l~~~~~~~~~~~ 196 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGK----GMFYNAYPQQDGK 196 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSS----EEEEEECCCCSSC
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCC----EEEEEEECCcccc
Confidence 455568888888 456787665543 89999985 4444322222 2367899999543 5777777765
Q ss_pred -------------EEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeC-----CCcEEEEecCCCCC
Q 036314 92 -------------LRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSW-----DCTISLWRTNDSDA 153 (347)
Q Consensus 92 -------------v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~-----Dg~I~iwd~~~~~~ 153 (347)
|++|++.+++.. ...+.....|...+..+.|+|||++|+..+. +..|.+||+.+...
T Consensus 197 ~~~~~~~~~~~~~v~~~~l~t~~~~-----~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~ 271 (710)
T 2xdw_A 197 SDGTETSTNLHQKLYYHVLGTDQSE-----DILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESN 271 (710)
T ss_dssp CSSSCCCCCCCCEEEEEETTSCGGG-----CEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSS
T ss_pred ccccccccCCCCEEEEEECCCCccc-----ceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECccccc
Confidence 999998765310 0122122235566788999999998887654 66899998764100
Q ss_pred --CCccceeeeccCCCccccccccccccccccCCccceEEEEeCCCCeEEEEecCC----cEEEEECCCCce--eeeeee
Q 036314 154 --AGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQETIYSASWDH----SVRTWDVEMGKD--LSDIFC 225 (347)
Q Consensus 154 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~dg----~v~vwd~~~~~~--~~~~~~ 225 (347)
.+. .....+..+...+.....++++.|+..+.++ .|.+||+.++.. ...+..
T Consensus 272 ~~~~~--------------------~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~ 331 (710)
T 2xdw_A 272 GITGI--------------------LKWVKLIDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVP 331 (710)
T ss_dssp SSCSS--------------------CCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEEC
T ss_pred ccCCc--------------------cceEEeeCCCCcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccC
Confidence 000 0122333344444444446777776555433 589999987642 233332
Q ss_pred C-e--eeEEEEeeCCCCcEEEEecCCCc--EEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEe---CCCcE
Q 036314 226 G-K--ALNCIDIGGEGSALIAAGGSDPI--LRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISAS---YDGKV 297 (347)
Q Consensus 226 ~-~--~~~~~~~~~~~~~~la~~~~d~~--i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s---~D~~i 297 (347)
. . .+..+.+. +++.++++...|+. |.+||+... .....+..+...+..+.++|++..++++.+ ..++|
T Consensus 332 ~~~~~~~~~~~~~-~~~~lv~~~~~~g~~~l~~~~~~~g---~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i 407 (710)
T 2xdw_A 332 EHEKDVLEWVACV-RSNFLVLCYLHDVKNTLQLHDLATG---ALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGII 407 (710)
T ss_dssp CCSSCEEEEEEEE-TTTEEEEEEEETTEEEEEEEETTTC---CEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEE
T ss_pred CCCCCeEEEEEEE-cCCEEEEEEEECCEEEEEEEECCCC---CEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEE
Confidence 2 2 45667775 45667888877875 556676432 234566777778889999998876555544 34789
Q ss_pred EEEEcCCCc
Q 036314 298 MLWDLRTAW 306 (347)
Q Consensus 298 ~lwd~~~~~ 306 (347)
.+||+.+++
T Consensus 408 ~~~d~~tg~ 416 (710)
T 2xdw_A 408 YHCDLTKEE 416 (710)
T ss_dssp EEEETTSSS
T ss_pred EEEECCCCc
Confidence 999998876
No 179
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.56 E-value=7.7e-14 Score=135.75 Aligned_cols=244 Identities=10% Similarity=-0.072 Sum_probs=153.3
Q ss_pred CcCCceeeccCC-CCCEEE-----EEecCCeEEEEcCCCeEEEEeeccCCce--EEEEEeecCCCceEEEEEccCCCc--
Q 036314 22 LHDDWVSAVDGS-NPGFIL-----TGCYDNLGRVWKAGGVCTHILEGHCGAV--SSVNIIKSDGLKYVTVATASKDQT-- 91 (347)
Q Consensus 22 ~h~~~v~~~~~~-~~~~l~-----sg~~d~~i~iw~~~~~~~~~l~~h~~~V--~~v~~~~~~~~~~~~l~s~s~Dg~-- 91 (347)
+|+..+..+++| ++++|| +|+.+.+|++||+.+..... ..+...+ ..++|+|++ ..|+.++.|..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~-~~~~~~~~~~~~~wspDg----~~l~~~~~d~~~~ 192 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK-VDVIEGGKYATPKWTPDS----KGFYYEWLPTDPS 192 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS-SCCBSCCTTCCCEECTTS----SEEEEEECCCCTT
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC-CcccCcccccceEEecCC----CEEEEEEecCCCC
Confidence 566678889998 456777 45556799999986432110 2222223 678999854 35777888776
Q ss_pred -----------EEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCC----cEEEEecCCCCCCCc
Q 036314 92 -----------LRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDC----TISLWRTNDSDAAGN 156 (347)
Q Consensus 92 -----------v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg----~I~iwd~~~~~~~~~ 156 (347)
|++|++.+++.. .+.+.....|...+.++.|+|||++|+.++.++ .|.+|+..+.
T Consensus 193 ~~~~~~~~~~~v~~~~l~t~~~~-----~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~----- 262 (695)
T 2bkl_A 193 IKVDERPGYTTIRYHTLGTEPSK-----DTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEK----- 262 (695)
T ss_dssp SCGGGGGGGCEEEEEETTSCGGG-----CEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCS-----
T ss_pred CccccCCCCCEEEEEECCCCchh-----ceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCC-----
Confidence 999999765311 112223344666788999999999888777665 4555543221
Q ss_pred cceeeeccCCCccccccccccccccccCCccceEEEEeCCCCeEEEEec----CCcEEEEECCCCce--eeeeee---Ce
Q 036314 157 QVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQETIYSASW----DHSVRTWDVEMGKD--LSDIFC---GK 227 (347)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~----dg~v~vwd~~~~~~--~~~~~~---~~ 227 (347)
....+..+...+....+++++ ++..+. ++.|.+||+.++.. ...+.. ..
T Consensus 263 ---------------------~~~~l~~~~~~~~~~~~~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~ 320 (695)
T 2bkl_A 263 ---------------------DFRLLVKGVGAKYEVHAWKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSA 320 (695)
T ss_dssp ---------------------SCEEEEECSSCCEEEEEETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSC
T ss_pred ---------------------ceEEeecCCCceEEEEecCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCC
Confidence 112233333444555566666 544443 57899999977643 233332 22
Q ss_pred eeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCC-CCCeeEEEeCCCCCeEEEEEe---CCCcEEEEEcC
Q 036314 228 ALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSH-NSWISACKWHNKSWFHLISAS---YDGKVMLWDLR 303 (347)
Q Consensus 228 ~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h-~~~v~~v~~s~~~~~~l~s~s---~D~~i~lwd~~ 303 (347)
.+..+++. ++.++++...|+..+||.+...+. ....+..+ ...+..+.++|++..++++.+ ..++|.+||+.
T Consensus 321 ~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~g~--~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~ 396 (695)
T 2bkl_A 321 SLLSVSIV--GGHLSLEYLKDATSEVRVATLKGK--PVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVS 396 (695)
T ss_dssp EEEEEEEE--TTEEEEEEEETTEEEEEEEETTCC--EEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETT
T ss_pred eEEEEEEE--CCEEEEEEEECCEEEEEEEeCCCC--eeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECC
Confidence 45666665 456888888899888886542121 23445544 567888889998876554443 34789999998
Q ss_pred CCc
Q 036314 304 TAW 306 (347)
Q Consensus 304 ~~~ 306 (347)
+++
T Consensus 397 ~g~ 399 (695)
T 2bkl_A 397 TGK 399 (695)
T ss_dssp TCC
T ss_pred CCc
Confidence 875
No 180
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.55 E-value=2.7e-12 Score=111.34 Aligned_cols=240 Identities=10% Similarity=0.048 Sum_probs=153.0
Q ss_pred EEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEE
Q 036314 57 THILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCS 136 (347)
Q Consensus 57 ~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~s 136 (347)
...+..+.....+++|.++++ ..++++..++.|..|+..++ ...+..+...+.+++++++|+++++
T Consensus 20 ~~~l~~~~~~~eg~~~d~~g~---~l~~~~~~~~~i~~~~~~~~-----------~~~~~~~~~~~~~l~~~~dg~l~v~ 85 (296)
T 3e5z_A 20 ARRLADGFTWTEGPVYVPARS---AVIFSDVRQNRTWAWSDDGQ-----------LSPEMHPSHHQNGHCLNKQGHLIAC 85 (296)
T ss_dssp CEEEECCCSSEEEEEEEGGGT---EEEEEEGGGTEEEEEETTSC-----------EEEEESSCSSEEEEEECTTCCEEEE
T ss_pred EEEEecCCccccCCeEeCCCC---EEEEEeCCCCEEEEEECCCC-----------eEEEECCCCCcceeeECCCCcEEEE
Confidence 344555666678899998543 25788889999999998653 2334556777899999999998888
Q ss_pred eeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccC-CccceEEEEe-CCCCeEEE----Eec-----
Q 036314 137 GSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVG-HTQCVSSVVW-PQQETIYS----ASW----- 205 (347)
Q Consensus 137 gs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~-~~~~~l~s----~s~----- 205 (347)
...++.|.+||..++... .. .....+ ....+..+++ +++..+++ ++.
T Consensus 86 ~~~~~~i~~~d~~~g~~~----~~------------------~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~ 143 (296)
T 3e5z_A 86 SHGLRRLERQREPGGEWE----SI------------------ADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEG 143 (296)
T ss_dssp ETTTTEEEEECSTTCCEE----EE------------------ECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGS
T ss_pred ecCCCeEEEEcCCCCcEE----EE------------------eeccCCCCCCCCCCEEECCCCCEEEECCcccccccccc
Confidence 777899999997554210 00 000000 0112345666 46666665 321
Q ss_pred --------CCcEEEEECCCCceeeeee-eCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCC-CCeEEecCCCCCe
Q 036314 206 --------DHSVRTWDVEMGKDLSDIF-CGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTS-APVFQFSSHNSWI 275 (347)
Q Consensus 206 --------dg~v~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~-~~~~~~~~h~~~v 275 (347)
.+.|..+|.. ++ +..+. .......+++++++.. +++.+.++.|.+||+...+.. .....+..+...+
T Consensus 144 ~~~~~~~~~~~l~~~~~~-g~-~~~~~~~~~~~~gi~~s~dg~~-lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p 220 (296)
T 3e5z_A 144 YGGEMELPGRWVFRLAPD-GT-LSAPIRDRVKPNGLAFLPSGNL-LVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKT 220 (296)
T ss_dssp SCCCCCSSSCEEEEECTT-SC-EEEEECCCSSEEEEEECTTSCE-EEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCC
T ss_pred ccccccCCCcEEEEECCC-CC-EEEeecCCCCCccEEECCCCCE-EEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCC
Confidence 2345555544 33 22222 2234577888776554 477888899999998632221 1122333455567
Q ss_pred eEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEee-cC-CCEEEEccCCceEEE
Q 036314 276 SACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADW-WR-GDSVISGGVDSKLCV 340 (347)
Q Consensus 276 ~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~-~~-~~~l~s~s~D~~v~v 340 (347)
..++++++|. +.++. ++.|.+||.+ ++.+..+..+.. +.+++| .+ ++.|..++.++..++
T Consensus 221 ~~i~~d~~G~-l~v~~--~~~v~~~~~~-g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~l~~~ 282 (296)
T 3e5z_A 221 DGLRVDAGGL-IWASA--GDGVHVLTPD-GDELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTEFWSI 282 (296)
T ss_dssp CSEEEBTTSC-EEEEE--TTEEEEECTT-SCEEEEEECSSC-CCEEEEESTTSCEEEEEETTEEEEE
T ss_pred CeEEECCCCC-EEEEc--CCeEEEECCC-CCEEEEEECCCC-ceeEEEECCCCCEEEEEcCCeEEEE
Confidence 7899999985 34443 8899999997 667777777777 899999 44 556777777765544
No 181
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.55 E-value=2.8e-12 Score=125.08 Aligned_cols=244 Identities=10% Similarity=0.038 Sum_probs=152.8
Q ss_pred cCCceEEEEEeecCCCceEEEEEccCCC-----cEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEe
Q 036314 63 HCGAVSSVNIIKSDGLKYVTVATASKDQ-----TLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSG 137 (347)
Q Consensus 63 h~~~V~~v~~~~~~~~~~~~l~s~s~Dg-----~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sg 137 (347)
|...+..++|+|++. .||.++.++ +|++||+.+++... .++.. ..+.+++|+|||+.|+.+
T Consensus 123 ~~~~~~~~~~SPDg~----~la~~~~~~G~~~~~i~v~d~~tg~~~~--------~~~~~--~~~~~~~wspDg~~l~~~ 188 (710)
T 2xdw_A 123 GTVALRGYAFSEDGE----YFAYGLSASGSDWVTIKFMKVDGAKELP--------DVLER--VKFSCMAWTHDGKGMFYN 188 (710)
T ss_dssp SCEEEEEEEECTTSS----EEEEEEEETTCSCEEEEEEETTTTEEEE--------EEEEE--ECSCCEEECTTSSEEEEE
T ss_pred CCEEEEEEEECCCCC----EEEEEEcCCCCceEEEEEEECCCCCCCc--------ccccC--cccceEEEEeCCCEEEEE
Confidence 444688899998543 455444332 89999998875321 11222 225678999999999988
Q ss_pred eCCCc----------------EEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CCCCeE
Q 036314 138 SWDCT----------------ISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETI 200 (347)
Q Consensus 138 s~Dg~----------------I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l 200 (347)
+.|+. |++|++.++... ...+.....|...+..+.| +++++|
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~---------------------~~~v~~~~~~~~~~~~~~~SpDg~~l 247 (710)
T 2xdw_A 189 AYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSE---------------------DILCAEFPDEPKWMGGAELSDDGRYV 247 (710)
T ss_dssp ECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGG---------------------CEEEECCTTCTTCEEEEEECTTSCEE
T ss_pred EECCccccccccccccCCCCEEEEEECCCCccc---------------------ceEEeccCCCCeEEEEEEEcCCCCEE
Confidence 88876 899988653210 0011122224455667777 577887
Q ss_pred EEEec-----CCcEEEEECCC------Cc-eeeeeeeCeeeEEEEeeCCCCcEEEEecC---CCcEEEEeCCCCCCCCCe
Q 036314 201 YSASW-----DHSVRTWDVEM------GK-DLSDIFCGKALNCIDIGGEGSALIAAGGS---DPILRIWDPRKPGTSAPV 265 (347)
Q Consensus 201 ~s~s~-----dg~v~vwd~~~------~~-~~~~~~~~~~~~~~~~~~~~~~~la~~~~---d~~i~iwd~~~~~~~~~~ 265 (347)
+.++. +..|.+||+.+ +. ....+..........+.+++..+++.+.. ...|.+||+..+.. ...
T Consensus 248 ~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~-~~~ 326 (710)
T 2xdw_A 248 LLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEE-SKW 326 (710)
T ss_dssp EEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCG-GGC
T ss_pred EEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCc-ccc
Confidence 76664 56899999976 42 23444332211122355555555555433 34799999875321 122
Q ss_pred EEecCCCC--CeeEEEeCCCCCeEEEEEeCCCc--EEEEEcCCCccceeecCCCCeEEEEeecC-CCEEE----EccCCc
Q 036314 266 FQFSSHNS--WISACKWHNKSWFHLISASYDGK--VMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVI----SGGVDS 336 (347)
Q Consensus 266 ~~~~~h~~--~v~~v~~s~~~~~~l~s~s~D~~--i~lwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~----s~s~D~ 336 (347)
..+..|.. .+..+.|++++ .++++...|+. |.+||+.+++.+..+..+.+.+..+.+++ ++.|+ +....+
T Consensus 327 ~~l~~~~~~~~~~~~~~~~~~-~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~ 405 (710)
T 2xdw_A 327 KVLVPEHEKDVLEWVACVRSN-FLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPG 405 (710)
T ss_dssp EEEECCCSSCEEEEEEEETTT-EEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCC
T ss_pred eeccCCCCCCeEEEEEEEcCC-EEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCC
Confidence 44545654 57888998654 67888888885 55667767776777777888888999975 55544 233467
Q ss_pred eEEEeec
Q 036314 337 KLCVSSG 343 (347)
Q Consensus 337 ~v~vw~~ 343 (347)
+|.+|+.
T Consensus 406 ~i~~~d~ 412 (710)
T 2xdw_A 406 IIYHCDL 412 (710)
T ss_dssp EEEEEET
T ss_pred EEEEEEC
Confidence 8888874
No 182
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.52 E-value=4.1e-12 Score=113.71 Aligned_cols=257 Identities=9% Similarity=0.030 Sum_probs=158.3
Q ss_pred eccCC-CCCEEEEEe----------cCCeEEEEcCC-CeEEEEeecc------CCceEEEEEeecCCCceEEEEEccC--
Q 036314 29 AVDGS-NPGFILTGC----------YDNLGRVWKAG-GVCTHILEGH------CGAVSSVNIIKSDGLKYVTVATASK-- 88 (347)
Q Consensus 29 ~~~~~-~~~~l~sg~----------~d~~i~iw~~~-~~~~~~l~~h------~~~V~~v~~~~~~~~~~~~l~s~s~-- 88 (347)
.++++ ++++|.+++ .+++|.+||.. ++.+..+.-. ......++|+|++. +|+++..
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~----~l~v~n~~~ 129 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGK----FIVLQNASP 129 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSS----EEEEEEESS
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCC----EEEEECCCC
Confidence 67787 456777765 36789999975 4555555422 23456789988543 5666543
Q ss_pred CCcEEEEeccccccccCccccceeee-eeccccceEEEEEeCCC-CEEEEeeCCCcEEEEecCCCCCCCccceeeeccCC
Q 036314 89 DQTLRLWKFDAEELVNHPKKIRSFKI-LRGHKASVHSIAAETSG-NMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGN 166 (347)
Q Consensus 89 Dg~v~~wd~~~~~~~~~~~~~~~~~~-~~~h~~~V~~v~~s~~~-~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~ 166 (347)
+++|.+||+.+++. +.. +. + .....+.+.|++ ..+++.+.||++.+|+...... .......
T Consensus 130 ~~~v~v~d~~~~~~---------~~~~i~-~-~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~---~~~~~~~--- 192 (361)
T 2oiz_A 130 ATSIGIVDVAKGDY---------VEDVTA-A-AGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGK---VASQSRS--- 192 (361)
T ss_dssp SEEEEEEETTTTEE---------EEEEGG-G-TTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSS---EEEEEEC---
T ss_pred CCeEEEEECCCCcE---------EEEEec-C-CCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCc---Eeeeccc---
Confidence 68999999987643 222 22 1 122335566765 6778899999999998754211 0000000
Q ss_pred CccccccccccccccccCCccceEEEEeCCCCeEEEEecCCcEEEEECCCCcee--eeeee-----------CeeeEEEE
Q 036314 167 NQVEEPQLEGEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDL--SDIFC-----------GKALNCID 233 (347)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~--~~~~~-----------~~~~~~~~ 233 (347)
...+..+..++....-+++..++..+.++.+.++|+...... ..+.. ......++
T Consensus 193 ------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a 260 (361)
T 2oiz_A 193 ------------KQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVG 260 (361)
T ss_dssp ------------CCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEE
T ss_pred ------------cceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEE
Confidence 001111111111001134556666778899999998654321 11110 00111256
Q ss_pred eeCCCCcEEEEec----------CCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcC
Q 036314 234 IGGEGSALIAAGG----------SDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLR 303 (347)
Q Consensus 234 ~~~~~~~~la~~~----------~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~ 303 (347)
+++++..++++.. ..+.|.+||+... +.+.++..+. ...++|+|++. +|++++. ++|.+||.+
T Consensus 261 ~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~---~~v~~i~~~~--p~~ia~spdg~-~l~v~n~-~~v~v~D~~ 333 (361)
T 2oiz_A 261 LHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTK---QRVARIPGRD--ALSMTIDQQRN-LMLTLDG-GNVNVYDIS 333 (361)
T ss_dssp EETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTT---EEEEEEECTT--CCEEEEETTTT-EEEEECS-SCEEEEECS
T ss_pred EecCCCeEEEEEccCCCcccccCCCceEEEEECCCC---cEEEEEecCC--eeEEEECCCCC-EEEEeCC-CeEEEEECC
Confidence 7777666655543 1358999998743 3466777776 89999999997 4776666 999999999
Q ss_pred CC--ccceeecCCCCeEEEEeecC
Q 036314 304 TA--WPLSVIDSHKDKVLCADWWR 325 (347)
Q Consensus 304 ~~--~~~~~~~~h~~~v~~~~~~~ 325 (347)
++ +.++++..+....+.+.++|
T Consensus 334 t~~l~~~~~i~~~G~~P~~~~~~p 357 (361)
T 2oiz_A 334 QPEPKLLRTIEGAAEASLQVQFHP 357 (361)
T ss_dssp SSSCEEEEEETTSCSSEEEEEECC
T ss_pred CCcceeeEEeccCCCCcEEEEecC
Confidence 99 88888766667778888876
No 183
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.51 E-value=4.4e-11 Score=105.51 Aligned_cols=257 Identities=11% Similarity=0.073 Sum_probs=160.3
Q ss_pred CCeEEEEcCC-CeEEEEee----c--cCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeee
Q 036314 44 DNLGRVWKAG-GVCTHILE----G--HCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILR 116 (347)
Q Consensus 44 d~~i~iw~~~-~~~~~~l~----~--h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~ 116 (347)
+++|.++|.. ++....+. + .......+.+.. + ...++...+++|.+||..+++. +.++.
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~--~---~lyv~~~~~~~v~viD~~t~~~---------~~~i~ 81 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRD--G---IGWIVVNNSHVIFAIDINTFKE---------VGRIT 81 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEET--T---EEEEEEGGGTEEEEEETTTCCE---------EEEEE
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEEC--C---EEEEEEcCCCEEEEEECcccEE---------EEEcC
Confidence 7899999986 44443321 1 112345676632 2 3456667789999999887653 23343
Q ss_pred ccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeCC
Q 036314 117 GHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQ 196 (347)
Q Consensus 117 ~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 196 (347)
.......+++++++++.++...++.|.+||..+...... .. .....++......+++ +
T Consensus 82 -~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~------i~--------------~g~~~~~~~~p~~i~~-~ 139 (328)
T 3dsm_A 82 -GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGY------IE--------------CPDMDMESGSTEQMVQ-Y 139 (328)
T ss_dssp -CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEE------EE--------------CTTCCTTTCBCCCEEE-E
T ss_pred -CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEE------EE--------------cCCccccCCCcceEEE-E
Confidence 245678899989986555555899999999876421100 00 0000001112234444 4
Q ss_pred CCeEEEEe--cCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCC----------CcEEEEeCCCCCCCCC
Q 036314 197 QETIYSAS--WDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSD----------PILRIWDPRKPGTSAP 264 (347)
Q Consensus 197 ~~~l~s~s--~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d----------~~i~iwd~~~~~~~~~ 264 (347)
++.|+.+. .+++|.++|+++++.+..+........+.+.++ +.+++++..+ +.|.++|..... .
T Consensus 140 ~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~d-G~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~---v 215 (328)
T 3dsm_A 140 GKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKY-NKMWTITDGGYEGSPYGYEAPSLYRIDAETFT---V 215 (328)
T ss_dssp TTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTT-SEEEEEBCCBCTTCSSCBCCCEEEEEETTTTE---E
T ss_pred CCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCC-CCEEEEECCCccCCccccCCceEEEEECCCCe---E
Confidence 55665555 488999999999887777765555566777654 4566665544 789999986421 2
Q ss_pred eEEecCC-CCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCcccee--ecCCCCeEEEEeecC--CCEEEEc----cCC
Q 036314 265 VFQFSSH-NSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSV--IDSHKDKVLCADWWR--GDSVISG----GVD 335 (347)
Q Consensus 265 ~~~~~~h-~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~--~~~h~~~v~~~~~~~--~~~l~s~----s~D 335 (347)
...+.-. ......++|+|++.. |..+.. .|.+||..+++.... +..+.....++++.| +..+++. ..+
T Consensus 216 ~~~~~~~~g~~p~~la~~~d~~~-lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~ 292 (328)
T 3dsm_A 216 EKQFKFKLGDWPSEVQLNGTRDT-LYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQ 292 (328)
T ss_dssp EEEEECCTTCCCEEEEECTTSCE-EEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSE
T ss_pred EEEEecCCCCCceeEEEecCCCE-EEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccC
Confidence 2233221 236789999998876 444433 899999988765321 222245678999975 4456776 678
Q ss_pred ceEEEeec
Q 036314 336 SKLCVSSG 343 (347)
Q Consensus 336 ~~v~vw~~ 343 (347)
++|.+|+.
T Consensus 293 ~~V~v~d~ 300 (328)
T 3dsm_A 293 GIVYRYSP 300 (328)
T ss_dssp EEEEEECT
T ss_pred CEEEEECC
Confidence 99999974
No 184
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.48 E-value=6e-10 Score=96.05 Aligned_cols=272 Identities=10% Similarity=-0.031 Sum_probs=169.6
Q ss_pred cCCceeeccCC-CCCEEEEEecCCeEEEEcCCCeEEEE-eeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEecccc
Q 036314 23 HDDWVSAVDGS-NPGFILTGCYDNLGRVWKAGGVCTHI-LEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAE 100 (347)
Q Consensus 23 h~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~~~~~~~-l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~ 100 (347)
+...+.+++.. ++.+.++...++.|..||..+..... +..+...+.++++.+++ ...++...++.|..|+.+ +
T Consensus 13 ~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~i~~~~~g----~l~v~~~~~~~i~~~~~~-g 87 (299)
T 2z2n_A 13 QDTGPYGITVSDKGKVWITQHKANMISCINLDGKITEYPLPTPDAKVMCLTISSDG----EVWFTENAANKIGRITKK-G 87 (299)
T ss_dssp SSCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTTS----CEEEEETTTTEEEEECTT-S
T ss_pred cCCCccceEECCCCCEEEEecCCCcEEEEcCCCCeEEecCCcccCceeeEEECCCC----CEEEeCCCCCeEEEECCC-C
Confidence 34678888876 45566666567899999977544332 23345678889887743 245666667889999875 2
Q ss_pred ccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccc
Q 036314 101 ELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAIS 180 (347)
Q Consensus 101 ~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (347)
+. +.+ .+..+...+.+++++++|+++++...++.|.+||. ++... ..
T Consensus 88 ~~-------~~~-~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~------------------------~~ 134 (299)
T 2z2n_A 88 II-------KEY-TLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIR------------------------EY 134 (299)
T ss_dssp CE-------EEE-ECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEE------------------------EE
T ss_pred cE-------EEE-eCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEE------------------------Ee
Confidence 21 111 12224556889999999998888878889999986 32110 00
Q ss_pred cccCCccceEEEEeC-CCCeEEEEecCCcEEEEECCCCceeee-ee-eCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCC
Q 036314 181 TLVGHTQCVSSVVWP-QQETIYSASWDHSVRTWDVEMGKDLSD-IF-CGKALNCIDIGGEGSALIAAGGSDPILRIWDPR 257 (347)
Q Consensus 181 ~~~~h~~~v~~~~~~-~~~~l~s~s~dg~v~vwd~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~ 257 (347)
....+...+..+++. ++..+++...++.|..||. +++.... +. ....+..+.+.++ +.+.++...++.|..||.
T Consensus 135 ~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~-g~l~v~~~~~~~i~~~~~- 211 (299)
T 2z2n_A 135 ELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGND-DALWFVEIIGNKIGRITT- 211 (299)
T ss_dssp ECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTT-SSEEEEETTTTEEEEECT-
T ss_pred cCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCC-CCEEEEccCCceEEEECC-
Confidence 011122346677764 5555555556788999998 5554321 11 1234567788665 456666666889999998
Q ss_pred CCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceee--cCCCCeEEEEeecCCCEEEEccCC
Q 036314 258 KPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVI--DSHKDKVLCADWWRGDSVISGGVD 335 (347)
Q Consensus 258 ~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~--~~h~~~v~~~~~~~~~~l~s~s~D 335 (347)
.. .. .......+...+.++++++++. +.++...++.|.+||.+ ++ +..+ ..+...+.++.+.+|...++.+.+
T Consensus 212 ~g-~~-~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~d~~-g~-~~~~~~~~~~~~~~~i~~~~g~l~v~~~~~ 286 (299)
T 2z2n_A 212 SG-EI-TEFKIPTPNARPHAITAGAGID-LWFTEWGANKIGRLTSN-NI-IEEYPIQIKSAEPHGICFDGETIWFAMECD 286 (299)
T ss_dssp TC-CE-EEEECSSTTCCEEEEEECSTTC-EEEEETTTTEEEEEETT-TE-EEEEECSSSSCCEEEEEECSSCEEEEETTT
T ss_pred CC-cE-EEEECCCCCCCceeEEECCCCC-EEEeccCCceEEEECCC-Cc-eEEEeCCCCCCccceEEecCCCEEEEecCC
Confidence 32 21 1223344556789999999975 45555577899999984 43 3333 344567888888335555554545
Q ss_pred ceEEE
Q 036314 336 SKLCV 340 (347)
Q Consensus 336 ~~v~v 340 (347)
+.+++
T Consensus 287 ~l~~~ 291 (299)
T 2z2n_A 287 KIGKL 291 (299)
T ss_dssp EEEEE
T ss_pred cEEEE
Confidence 44444
No 185
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.48 E-value=3.5e-11 Score=108.25 Aligned_cols=228 Identities=11% Similarity=0.029 Sum_probs=133.2
Q ss_pred ccCC-CCCEEEEEecCCeEEEEcCC-CeEEEEeeccCCceEE---E----------------EEeecCCCceEEEEEc--
Q 036314 30 VDGS-NPGFILTGCYDNLGRVWKAG-GVCTHILEGHCGAVSS---V----------------NIIKSDGLKYVTVATA-- 86 (347)
Q Consensus 30 ~~~~-~~~~l~sg~~d~~i~iw~~~-~~~~~~l~~h~~~V~~---v----------------~~~~~~~~~~~~l~s~-- 86 (347)
+.++ ++++|+.++.++.+++|+.. +.....+..+.+.... + .++|++. .++..
T Consensus 86 ~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~----~~~~~~~ 161 (396)
T 3c5m_A 86 GFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTS----WEKFAEF 161 (396)
T ss_dssp CEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCS----HHHHHHH
T ss_pred ceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCc----ceeeeee
Confidence 5566 56799999999999999975 4444444444442222 1 2233221 12222
Q ss_pred ---cCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeC-CCCEEEEeeCC------CcEEEEecCCCCCCCc
Q 036314 87 ---SKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAET-SGNMVCSGSWD------CTISLWRTNDSDAAGN 156 (347)
Q Consensus 87 ---s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~-~~~~l~sgs~D------g~I~iwd~~~~~~~~~ 156 (347)
..+..|.+||+.+++. ..+..+...+..++|+| +++.|+..+.+ ..|.+|++....
T Consensus 162 ~~~~~~~~l~~~d~~~g~~----------~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~---- 227 (396)
T 3c5m_A 162 YHTNPTCRLIKVDIETGEL----------EVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSN---- 227 (396)
T ss_dssp HHTCCCEEEEEEETTTCCE----------EEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCC----
T ss_pred ccCCCcceEEEEECCCCcE----------EeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCc----
Confidence 3566889999876532 12334667788999999 78877655543 357777764321
Q ss_pred cceeeeccCCCccccccccccccccccCC--ccceEEEEe-CCCCeEEEEecC-----CcEEEEECCCCceeeeeeeCee
Q 036314 157 QVSIKKRKGNNQVEEPQLEGEAISTLVGH--TQCVSSVVW-PQQETIYSASWD-----HSVRTWDVEMGKDLSDIFCGKA 228 (347)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h--~~~v~~~~~-~~~~~l~s~s~d-----g~v~vwd~~~~~~~~~~~~~~~ 228 (347)
...+..+ ...+..+.| |+++.|+.++.+ +.|.+||+.+++........ .
T Consensus 228 ----------------------~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~-~ 284 (396)
T 3c5m_A 228 ----------------------VRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMP-P 284 (396)
T ss_dssp ----------------------CEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECC-S
T ss_pred ----------------------eeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCC-C
Confidence 1111111 224666777 577777776654 45999999887643222111 2
Q ss_pred eEEEEeeCCCCcEEEEec----------------CCCcEEEEeCCCCCCCCCeEEecCCCC-----------CeeEEEeC
Q 036314 229 LNCIDIGGEGSALIAAGG----------------SDPILRIWDPRKPGTSAPVFQFSSHNS-----------WISACKWH 281 (347)
Q Consensus 229 ~~~~~~~~~~~~~la~~~----------------~d~~i~iwd~~~~~~~~~~~~~~~h~~-----------~v~~v~~s 281 (347)
.. ..++++++.+++.++ .+..|++||+.... ...+..+.. .+..+.|+
T Consensus 285 ~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~s 359 (396)
T 3c5m_A 285 CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKS----AQKLCKHSTSWDVLDGDRQITHPHPSFT 359 (396)
T ss_dssp EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTB----CCEEEECCCCCCCBTTBSSTTCCCCEEC
T ss_pred CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCc----eEEccCCCCccccccccccCCCCCceEc
Confidence 22 677762444666543 34789999986432 123434443 25668899
Q ss_pred CCCCeEEEEEeCCCcEEEEEcC
Q 036314 282 NKSWFHLISASYDGKVMLWDLR 303 (347)
Q Consensus 282 ~~~~~~l~s~s~D~~i~lwd~~ 303 (347)
|++..++.++..++...||.++
T Consensus 360 ~dg~~l~~~s~~~~~~~l~~~~ 381 (396)
T 3c5m_A 360 PNDDGVLFTSDFEGVPAIYIAD 381 (396)
T ss_dssp TTSSEEEEEECTTSSCEEEEEE
T ss_pred cCCCeEEEEecCCCCceEEEEE
Confidence 9997644444456666666543
No 186
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.47 E-value=2.6e-11 Score=104.30 Aligned_cols=217 Identities=9% Similarity=-0.038 Sum_probs=141.4
Q ss_pred CCCCEEEEEecCCeEEEEcC-CCeEEEEeeccC-CceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccc
Q 036314 33 SNPGFILTGCYDNLGRVWKA-GGVCTHILEGHC-GAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIR 110 (347)
Q Consensus 33 ~~~~~l~sg~~d~~i~iw~~-~~~~~~~l~~h~-~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~ 110 (347)
+++++|++++.|+.|++||. +|+.+..+..+. ..+.++.+.|++ ..++ +.++.|+.||. +++.
T Consensus 3 ~~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG----~ilv--s~~~~V~~~d~-~G~~-------- 67 (276)
T 3no2_A 3 SPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAG----EILF--SYSKGAKMITR-DGRE-------- 67 (276)
T ss_dssp CCCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTS----CEEE--ECBSEEEEECT-TSCE--------
T ss_pred CCCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCC----CEEE--eCCCCEEEECC-CCCE--------
Confidence 36789999999999999998 799888888776 467889988854 3556 45778999998 4543
Q ss_pred eeeeeecc-ccceEEEEEeCCCCEEEEeeC-CCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccc
Q 036314 111 SFKILRGH-KASVHSIAAETSGNMVCSGSW-DCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQC 188 (347)
Q Consensus 111 ~~~~~~~h-~~~V~~v~~s~~~~~l~sgs~-Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 188 (347)
+-.+..+ ...+.++.+.++|+++++.+. ++.|..++.. ++ ......... ...++...
T Consensus 68 -~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~-Gk----~l~~~~~~~---------------~~~~~~~~ 126 (276)
T 3no2_A 68 -LWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMK-GE----VLSKTEFET---------------GIERPHAQ 126 (276)
T ss_dssp -EEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECTT-SC----EEEEEEECC---------------SCSSGGGS
T ss_pred -EEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeCC-CC----EEEEEeccC---------------CCCccccc
Confidence 2233333 346888999999999998887 7777766642 21 110000000 00011111
Q ss_pred eEEEE-eCCCCeEEEEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEE
Q 036314 189 VSSVV-WPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQ 267 (347)
Q Consensus 189 v~~~~-~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~ 267 (347)
...+. .++++++++.+.++.|.+||.+ ++.+-++.....+......+ ++.+++++..++.|..+|.... ..+.+
T Consensus 127 ~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~~~~~~~~~~-~g~~~v~~~~~~~v~~~d~~tG---~~~w~ 201 (276)
T 3no2_A 127 FRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLSGTPFSSAFLD-NGDCLVACGDAHCFVQLNLESN---RIVRR 201 (276)
T ss_dssp CSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECSSCCCEEEECT-TSCEEEECBTTSEEEEECTTTC---CEEEE
T ss_pred ccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECCCCccceeEcC-CCCEEEEeCCCCeEEEEeCcCC---cEEEE
Confidence 11222 2678889999999999999987 88776665444444555544 4567777887889999997642 22444
Q ss_pred ecCC------CCCeeEEEeCCCCCeEEEEE
Q 036314 268 FSSH------NSWISACKWHNKSWFHLISA 291 (347)
Q Consensus 268 ~~~h------~~~v~~v~~s~~~~~~l~s~ 291 (347)
+..+ ...+..+...+++.. +++.
T Consensus 202 ~~~~~~~~~~l~~~~~~~~~~~G~i-~v~~ 230 (276)
T 3no2_A 202 VNANDIEGVQLFFVAQLFPLQNGGL-YICN 230 (276)
T ss_dssp EEGGGSBSCCCSEEEEEEECTTSCE-EEEE
T ss_pred ecCCCCCCccccccccceEcCCCCE-EEEe
Confidence 4322 234677888888753 4444
No 187
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.46 E-value=1.3e-11 Score=109.21 Aligned_cols=232 Identities=9% Similarity=0.023 Sum_probs=141.9
Q ss_pred CceeeccCC-CCCEEEEEecC---Ce--EEEEcCCCeEEEEeeccCCceEEEEEeecCCCceEEEEEccC----------
Q 036314 25 DWVSAVDGS-NPGFILTGCYD---NL--GRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASK---------- 88 (347)
Q Consensus 25 ~~v~~~~~~-~~~~l~sg~~d---~~--i~iw~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~---------- 88 (347)
..+..++++ ++++||..+.+ +. +.+|+..+.....+..+.. +..+.|+|++. .|+.++.
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~----~l~~~~~~~~~~~~~~~ 133 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN-IRSLEWNEDSR----KLLIVGFKRREDEDFIF 133 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE-EEEEEECTTSS----EEEEEEECCCC------
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC-ccceeECCCCC----EEEEEEccCCCcCCcEE
Confidence 346667888 45688877754 34 6666765433333443444 89999998543 4555543
Q ss_pred -----------------CCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCC-------cEE
Q 036314 89 -----------------DQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDC-------TIS 144 (347)
Q Consensus 89 -----------------Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg-------~I~ 144 (347)
...|.+||+.+++. ...+.. . .+..++|+||| ++++++.+. ...
T Consensus 134 ~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~---------~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~ 201 (347)
T 2gop_A 134 EDDVPAWFDDLGFFDGEKTTFWIFDTESEEV---------IEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWD 201 (347)
T ss_dssp ---CCCC---------CEEEEEEEETTTTEE---------EEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEE
T ss_pred EcccceeecCcccccCccceEEEEECCCCeE---------EeeecC-C-CcccccCCCCe-EEEEEeccccccccccccc
Confidence 25788899876542 122333 3 67889999999 888877653 456
Q ss_pred EEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeCCCCeEEEEecCC--------cEEEEECCC
Q 036314 145 LWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQETIYSASWDH--------SVRTWDVEM 216 (347)
Q Consensus 145 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~dg--------~v~vwd~~~ 216 (347)
||.+.++. ...+..+ ..+..+ .|+++.|+.++.++ .|.+|| +
T Consensus 202 l~~~d~~~--------------------------~~~l~~~-~~~~~~-spdg~~l~~~~~~~~~~~~~~~~l~~~d--~ 251 (347)
T 2gop_A 202 IYIWEDGK--------------------------EEKMFEK-VSFYAV-DSDGERILLYGKPEKKYMSEHNKLYIYD--G 251 (347)
T ss_dssp EEEEETTE--------------------------EEEEEEE-ESEEEE-EECSSCEEEEECCSSSCCCSSCEEEEEC--S
T ss_pred EEEeCCCc--------------------------eEEeccC-cceeeE-CCCCCEEEEEEccccCCccccceEEEEC--C
Confidence 66543110 1111112 233444 47888887776543 577777 4
Q ss_pred Cceeeeeee--CeeeEE-EEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeC
Q 036314 217 GKDLSDIFC--GKALNC-IDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASY 293 (347)
Q Consensus 217 ~~~~~~~~~--~~~~~~-~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~ 293 (347)
++. ..+.. ...+.. +.++ ++ ++++++.++.++|| +. .+. ...+..+...|.++.|+| . ++++++.
T Consensus 252 ~~~-~~l~~~~~~~~~~~~~~s--dg-~~~~~~~~~~~~l~-~~-~g~---~~~~~~~~~~v~~~~~s~-~--~~~~~~~ 319 (347)
T 2gop_A 252 KEV-MGILDEVDRGVGQAKIKD--GK-VYFTLFEEGSVNLY-IW-DGE---IKPIAKGRHWIMGFDVDE-I--VVYLKET 319 (347)
T ss_dssp SCE-EESSTTCCSEEEEEEEET--TE-EEEEEEETTEEEEE-EE-SSS---EEEEECSSSEEEEEEESS-S--EEEEEEC
T ss_pred Cce-EeccccCCcccCCccEEc--Cc-EEEEEecCCcEEEE-Ec-CCc---eEEEecCCCeEEeeeeeC-c--EEEEEcC
Confidence 443 22322 234554 6775 44 88888899999999 86 222 234445577899999998 3 5677776
Q ss_pred CCcE-EEEEcCCCccceeecCCCCe
Q 036314 294 DGKV-MLWDLRTAWPLSVIDSHKDK 317 (347)
Q Consensus 294 D~~i-~lwd~~~~~~~~~~~~h~~~ 317 (347)
++.. +||.++ ++ ...+..|...
T Consensus 320 ~~~~~~l~~~~-g~-~~~lt~~n~~ 342 (347)
T 2gop_A 320 ATRLRELFTWD-GE-EKQLTDYNDP 342 (347)
T ss_dssp SSSCCEEEEES-SS-EEECCCTTST
T ss_pred CCChHHheEeC-Cc-EEEeccccHh
Confidence 6654 888876 43 5556666544
No 188
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.46 E-value=3.1e-11 Score=104.64 Aligned_cols=238 Identities=10% Similarity=0.062 Sum_probs=148.2
Q ss_pred CcCCceeeccCC-CCC-EEEEEecCCeEEEEcCCCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccc
Q 036314 22 LHDDWVSAVDGS-NPG-FILTGCYDNLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDA 99 (347)
Q Consensus 22 ~h~~~v~~~~~~-~~~-~l~sg~~d~~i~iw~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~ 99 (347)
.+.....+++++ +++ +++++..++.|+.|+..+. ...+..+...+.++++.+++ ..+++...++.|.+||..+
T Consensus 25 ~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~~dg----~l~v~~~~~~~i~~~d~~~ 99 (296)
T 3e5z_A 25 DGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LSPEMHPSHHQNGHCLNKQG----HLIACSHGLRRLERQREPG 99 (296)
T ss_dssp CCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EEEEESSCSSEEEEEECTTC----CEEEEETTTTEEEEECSTT
T ss_pred cCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eEEEECCCCCcceeeECCCC----cEEEEecCCCeEEEEcCCC
Confidence 345566677776 455 7888889999999998766 66777788889999998844 3566666778999999866
Q ss_pred cccccCccccceeeeeec-cccceEEEEEeCCCCEEEEeeCCC---------------cEEEEecCCCCCCCccceeeec
Q 036314 100 EELVNHPKKIRSFKILRG-HKASVHSIAAETSGNMVCSGSWDC---------------TISLWRTNDSDAAGNQVSIKKR 163 (347)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~-h~~~V~~v~~s~~~~~l~sgs~Dg---------------~I~iwd~~~~~~~~~~~~~~~~ 163 (347)
++... ......+ ....+..++++++|+++++.+..+ .-.||.+....
T Consensus 100 g~~~~------~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g----------- 162 (296)
T 3e5z_A 100 GEWES------IADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDG----------- 162 (296)
T ss_dssp CCEEE------EECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTS-----------
T ss_pred CcEEE------EeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCCC-----------
Confidence 54311 0000111 123456799999999888732111 12344432210
Q ss_pred cCCCccccccccccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECC-CCce---eeeee-eCeeeEEEEeeCC
Q 036314 164 KGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVE-MGKD---LSDIF-CGKALNCIDIGGE 237 (347)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~-~~~~---~~~~~-~~~~~~~~~~~~~ 237 (347)
....+..+......++| ++++.+++.+.++.|.+||+. ++.. ...+. ....+..+++.++
T Consensus 163 --------------~~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~ 228 (296)
T 3e5z_A 163 --------------TLSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAG 228 (296)
T ss_dssp --------------CEEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTT
T ss_pred --------------CEEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCC
Confidence 01112233344577887 567777777778999999986 4443 11121 1123456777665
Q ss_pred CCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEe-CCCCCeEEEEEeCCCcEEEEEcCCC
Q 036314 238 GSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKW-HNKSWFHLISASYDGKVMLWDLRTA 305 (347)
Q Consensus 238 ~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~-s~~~~~~l~s~s~D~~i~lwd~~~~ 305 (347)
+ ++.++. ++.|.+||... .....+..+.. +.+++| .|++.. |+.++.++ +..++.++.
T Consensus 229 G-~l~v~~--~~~v~~~~~~g----~~~~~~~~~~~-~~~~~f~~~d~~~-L~v~t~~~-l~~~~~~~~ 287 (296)
T 3e5z_A 229 G-LIWASA--GDGVHVLTPDG----DELGRVLTPQT-TSNLCFGGPEGRT-LYMTVSTE-FWSIETNVR 287 (296)
T ss_dssp S-CEEEEE--TTEEEEECTTS----CEEEEEECSSC-CCEEEEESTTSCE-EEEEETTE-EEEEECSCC
T ss_pred C-CEEEEc--CCeEEEECCCC----CEEEEEECCCC-ceeEEEECCCCCE-EEEEcCCe-EEEEEcccc
Confidence 5 455554 78999999752 23455666666 899999 577754 66666653 444455543
No 189
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.45 E-value=5.2e-11 Score=101.50 Aligned_cols=236 Identities=8% Similarity=-0.039 Sum_probs=148.7
Q ss_pred ceeeccCC-CCCEEE-EEecCCeEEEEcCCCeEEEEe-eccCCceEEEEEeecCCCceEEEEEccCCCcEEEEecccccc
Q 036314 26 WVSAVDGS-NPGFIL-TGCYDNLGRVWKAGGVCTHIL-EGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEEL 102 (347)
Q Consensus 26 ~v~~~~~~-~~~~l~-sg~~d~~i~iw~~~~~~~~~l-~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~ 102 (347)
...+++++ ++.+++ +.+.++.|+.|+..+.....+ ..+...+.++++.+++ ..+++.. ++.|.+||......
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g----~l~v~~~-~~~i~~~d~~~~~~ 99 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAG----TVYVTDF-NNRVVTLAAGSNNQ 99 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTC----CEEEEET-TTEEEEECTTCSCC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCC----CEEEEcC-CCEEEEEeCCCceE
Confidence 56667766 456666 556788999999754333332 2333457788887743 2344444 88999999765421
Q ss_pred ccCccccceeeeee-ccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccccccccc
Q 036314 103 VNHPKKIRSFKILR-GHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAIST 181 (347)
Q Consensus 103 ~~~~~~~~~~~~~~-~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (347)
..+. .....+..++++++|+++++...++.|.+|+..+... ...
T Consensus 100 ----------~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~-------------------------~~~ 144 (270)
T 1rwi_B 100 ----------TVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQ-------------------------TVL 144 (270)
T ss_dssp ----------EECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSC-------------------------EEC
T ss_pred ----------eeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCcee-------------------------Eee
Confidence 1111 2235678999999999888878889999996432210 000
Q ss_pred ccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeeeeC-eeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCC
Q 036314 182 LVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFCG-KALNCIDIGGEGSALIAAGGSDPILRIWDPRKP 259 (347)
Q Consensus 182 ~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~ 259 (347)
.........++++ +++..+++...++.|.+||............. ..+..+++.+++ .++++...++.|.+||....
T Consensus 145 ~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g-~l~v~~~~~~~v~~~~~~~~ 223 (270)
T 1rwi_B 145 PFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAG-TVYVTEHNTNQVVKLLAGST 223 (270)
T ss_dssp CCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTC-CEEEEETTTSCEEEECTTCS
T ss_pred ccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCC-CEEEEECCCCcEEEEcCCCC
Confidence 0011123455666 45665566666789999998765433222222 346778887655 67777777889999997532
Q ss_pred CCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCc
Q 036314 260 GTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAW 306 (347)
Q Consensus 260 ~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~ 306 (347)
. .......+...+.+++++|++. ++++...+++|+++++...+
T Consensus 224 ~---~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 224 T---STVLPFTGLNTPLAVAVDSDRT-VYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp C---CEECCCCSCSCEEEEEECTTCC-EEEEEGGGTEEEEECCCGGG
T ss_pred c---ceeeccCCCCCceeEEECCCCC-EEEEECCCCEEEEEcCCCcc
Confidence 1 1222223345788999999985 68888899999999987654
No 190
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.43 E-value=2.9e-11 Score=106.51 Aligned_cols=232 Identities=6% Similarity=-0.014 Sum_probs=149.7
Q ss_pred CceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEE
Q 036314 65 GAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTIS 144 (347)
Q Consensus 65 ~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~ 144 (347)
..|.++.|.+... .++..+.+++++.|.- +....+..+...+.+++|+++|++++++..++.|.
T Consensus 6 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~ 69 (333)
T 2dg1_A 6 QDLPTLFYSGKSN----SAVPIISESELQTITA------------EPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIF 69 (333)
T ss_dssp CCCCBCCSCGGGG----CSSCCCCGGGSCEEEC------------EEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEE
T ss_pred cccceeeecCCcc----ceeEEeecccCccccc------------ceeEEEeccCccccCcEECCCCCEEEEECCCCEEE
Confidence 4466777777432 3555677889999932 13345566777789999999999888889999999
Q ss_pred EEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeC-CCCeEEEEecC----CcEEEEECCCCce
Q 036314 145 LWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP-QQETIYSASWD----HSVRTWDVEMGKD 219 (347)
Q Consensus 145 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~l~s~s~d----g~v~vwd~~~~~~ 219 (347)
+||..+... ......+...+.++++. +++.+++...+ +.|.+||..++..
T Consensus 70 ~~d~~~~~~-------------------------~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~ 124 (333)
T 2dg1_A 70 KINPETKEI-------------------------KRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNL 124 (333)
T ss_dssp EECTTTCCE-------------------------EEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSC
T ss_pred EEeCCCCcE-------------------------EEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEE
Confidence 998764321 01111234567888884 66666665555 5899999887654
Q ss_pred eeeee---eCeeeEEEEeeCCCCcEEEEecC------CCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEE
Q 036314 220 LSDIF---CGKALNCIDIGGEGSALIAAGGS------DPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLIS 290 (347)
Q Consensus 220 ~~~~~---~~~~~~~~~~~~~~~~~la~~~~------d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s 290 (347)
...+. ....+..+.+.+++ .++++... .+.|..+|.... . ...+..+...+..++|+|++..+.++
T Consensus 125 ~~~~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~~~~~~~l~~~~~~~~-~---~~~~~~~~~~~~~i~~~~dg~~l~v~ 199 (333)
T 2dg1_A 125 QDIIEDLSTAYCIDDMVFDSKG-GFYFTDFRGYSTNPLGGVYYVSPDFR-T---VTPIIQNISVANGIALSTDEKVLWVT 199 (333)
T ss_dssp EEEECSSSSCCCEEEEEECTTS-CEEEEECCCBTTBCCEEEEEECTTSC-C---EEEEEEEESSEEEEEECTTSSEEEEE
T ss_pred EEEEccCccCCcccceEECCCC-CEEEEeccccccCCCceEEEEeCCCC-E---EEEeecCCCcccceEECCCCCEEEEE
Confidence 32221 22356778887654 56555443 345666665421 1 22333334457889999998765666
Q ss_pred EeCCCcEEEEEcCC-Ccccee--------ecCCCCeEEEEeec-CCCEEEEccCCceEEEeec
Q 036314 291 ASYDGKVMLWDLRT-AWPLSV--------IDSHKDKVLCADWW-RGDSVISGGVDSKLCVSSG 343 (347)
Q Consensus 291 ~s~D~~i~lwd~~~-~~~~~~--------~~~h~~~v~~~~~~-~~~~l~s~s~D~~v~vw~~ 343 (347)
.+.++.|.+||+++ +..+.. +.++ ..+.++.+. +|+.+++...++.|.+|+-
T Consensus 200 ~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~ 261 (333)
T 2dg1_A 200 ETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNK 261 (333)
T ss_dssp EGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECT
T ss_pred eCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECC
Confidence 67789999999964 333221 1222 467788886 4766777667889999864
No 191
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.43 E-value=1.2e-10 Score=102.59 Aligned_cols=251 Identities=8% Similarity=-0.072 Sum_probs=154.4
Q ss_pred ceeeccCCCCCEEEEEecCCeEEEEcCC-CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEecccccccc
Q 036314 26 WVSAVDGSNPGFILTGCYDNLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVN 104 (347)
Q Consensus 26 ~v~~~~~~~~~~l~sg~~d~~i~iw~~~-~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~ 104 (347)
....+.+.++.+.++...+++|.+||.. ++.++.+.. ......+++++++ ...++...++.|.+||..+++..
T Consensus 45 ~~~~i~~~~~~lyv~~~~~~~v~viD~~t~~~~~~i~~-~~~p~~i~~~~~g----~lyv~~~~~~~v~~iD~~t~~~~- 118 (328)
T 3dsm_A 45 VAQSMVIRDGIGWIVVNNSHVIFAIDINTFKEVGRITG-FTSPRYIHFLSDE----KAYVTQIWDYRIFIINPKTYEIT- 118 (328)
T ss_dssp CEEEEEEETTEEEEEEGGGTEEEEEETTTCCEEEEEEC-CSSEEEEEEEETT----EEEEEEBSCSEEEEEETTTTEEE-
T ss_pred cceEEEEECCEEEEEEcCCCEEEEEECcccEEEEEcCC-CCCCcEEEEeCCC----eEEEEECCCCeEEEEECCCCeEE-
Confidence 3445555555666677778999999975 666666653 3557889987743 34455548899999998876532
Q ss_pred Cccccceeeeeeccc-----cceEEEEEeCCCCEEEEee-CCCcEEEEecCCCCCCCccceeeeccCCCccccccccccc
Q 036314 105 HPKKIRSFKILRGHK-----ASVHSIAAETSGNMVCSGS-WDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEA 178 (347)
Q Consensus 105 ~~~~~~~~~~~~~h~-----~~V~~v~~s~~~~~l~sgs-~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (347)
..+.... .....+++ .++.++++.. .+++|.++|..+....
T Consensus 119 --------~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~------------------------ 165 (328)
T 3dsm_A 119 --------GYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVV------------------------ 165 (328)
T ss_dssp --------EEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEE------------------------
T ss_pred --------EEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEE------------------------
Confidence 1222111 13455666 3444444443 4899999998764211
Q ss_pred cccccCCccceEEEEe-CCCCeEEEEecC----------CcEEEEECCCCceeeeeee--CeeeEEEEeeCCCCcEEEEe
Q 036314 179 ISTLVGHTQCVSSVVW-PQQETIYSASWD----------HSVRTWDVEMGKDLSDIFC--GKALNCIDIGGEGSALIAAG 245 (347)
Q Consensus 179 ~~~~~~h~~~v~~~~~-~~~~~l~s~s~d----------g~v~vwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~la~~ 245 (347)
..+.... ....+.+ ++++.++++..+ +.|.++|.++++....+.. +.....+++++++..++++.
T Consensus 166 -~~i~~g~-~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~ 243 (328)
T 3dsm_A 166 -DELTIGI-QPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWIN 243 (328)
T ss_dssp -EEEECSS-CBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEES
T ss_pred -EEEEcCC-CccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEc
Confidence 1111000 1123444 455555554444 7899999998876655543 34578899987666555543
Q ss_pred cCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEE----eCCCcEEEEEcCCCccceeecCCCCeEEEE
Q 036314 246 GSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA----SYDGKVMLWDLRTAWPLSVIDSHKDKVLCA 321 (347)
Q Consensus 246 ~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~----s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~ 321 (347)
. .|.+||+..... .....+..+......++++|++..+.++. ..+++|.+||.+ ++.+.++..- .....+
T Consensus 244 ~---~v~~~d~~t~~~-~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~~G-~~P~~~ 317 (328)
T 3dsm_A 244 N---DIWRMPVEADRV-PVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFYVG-IIPGAF 317 (328)
T ss_dssp S---SEEEEETTCSSC-CSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEEEE-ESEEEE
T ss_pred c---EEEEEECCCCce-eeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEEEec-cCcceE
Confidence 2 899999864321 11111222245678899999666667776 678999999998 8777776431 223455
Q ss_pred ee
Q 036314 322 DW 323 (347)
Q Consensus 322 ~~ 323 (347)
+|
T Consensus 318 ~~ 319 (328)
T 3dsm_A 318 CW 319 (328)
T ss_dssp EE
T ss_pred EE
Confidence 55
No 192
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.42 E-value=3.2e-10 Score=107.00 Aligned_cols=224 Identities=11% Similarity=0.067 Sum_probs=150.4
Q ss_pred EEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecC--CCCCCCccc
Q 036314 81 VTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTN--DSDAAGNQV 158 (347)
Q Consensus 81 ~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~--~~~~~~~~~ 158 (347)
..+++...+++|.++|..+++. +.++.. ...++.++|+|||+++++++.|+.|.+||+. +..
T Consensus 168 ~~~V~~~~~~~V~viD~~t~~v---------~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~------ 231 (567)
T 1qks_A 168 LFSVTLRDAGQIALIDGSTYEI---------KTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPT------ 231 (567)
T ss_dssp EEEEEETTTTEEEEEETTTCCE---------EEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCC------
T ss_pred eEEEEeCCCCeEEEEECCCCeE---------EEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCc------
Confidence 5678889999999999987653 233332 2356789999999999999999999999985 321
Q ss_pred eeeeccCCCccccccccccccccccCCccceEEEEeC-----CCCeEEEEe-cCCcEEEEECCCCceeeeeeeCe-----
Q 036314 159 SIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP-----QQETIYSAS-WDHSVRTWDVEMGKDLSDIFCGK----- 227 (347)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-----~~~~l~s~s-~dg~v~vwd~~~~~~~~~~~~~~----- 227 (347)
.+..+.... ....++++ ++++++.+. .++++.++|..+.+.+..+....
T Consensus 232 -------------------~v~~i~~G~-~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~ 291 (567)
T 1qks_A 232 -------------------TVAEIKIGS-EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDE 291 (567)
T ss_dssp -------------------EEEEEECCS-EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTT
T ss_pred -------------------EeEEEecCC-CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEecccccccc
Confidence 111222111 23456665 788776554 55899999999988777665321
Q ss_pred -------eeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEE
Q 036314 228 -------ALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLW 300 (347)
Q Consensus 228 -------~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lw 300 (347)
.+..+..++.+..+++...++|.|.++|....... .+..+ ........+.|+|++.++++++..+++|.++
T Consensus 292 ~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~-~v~~i-~~~~~~~d~~~~pdgr~~~va~~~sn~V~Vi 369 (567)
T 1qks_A 292 QEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNL-KTTEI-SAERFLHDGGLDGSHRYFITAANARNKLVVI 369 (567)
T ss_dssp CCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEE-EEEEE-ECCSSEEEEEECTTSCEEEEEEGGGTEEEEE
T ss_pred ccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccc-eeeee-eccccccCceECCCCCEEEEEeCCCCeEEEE
Confidence 24455555555666777778899999998643211 12222 2345677889999998877777788999999
Q ss_pred EcCCCccceeecC-----CCCeEEEEee-cC-CCE-EEEcc-CCceEEEeecc
Q 036314 301 DLRTAWPLSVIDS-----HKDKVLCADW-WR-GDS-VISGG-VDSKLCVSSGV 344 (347)
Q Consensus 301 d~~~~~~~~~~~~-----h~~~v~~~~~-~~-~~~-l~s~s-~D~~v~vw~~~ 344 (347)
|..+++.+..+.- |.+. ...| .| +.. ++++. .+++|.|++.-
T Consensus 370 D~~t~kl~~~i~vgg~~Phpg~--g~~~~~p~~g~v~~t~~~g~~~Vsvid~~ 420 (567)
T 1qks_A 370 DTKEGKLVAIEDTGGQTPHPGR--GANFVHPTFGPVWATSHMGDDSVALIGTD 420 (567)
T ss_dssp ETTTTEEEEEEECSSSSBCCTT--CEEEEETTTEEEEEEEBSSSSEEEEEECC
T ss_pred ECCCCcEEEEEeccCcCCCCcc--ceeeECCCCCcEEEeCCCCCCeEEEecCC
Confidence 9999876655432 4322 2233 45 344 45543 46899999764
No 193
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.41 E-value=1.9e-10 Score=98.00 Aligned_cols=234 Identities=6% Similarity=-0.020 Sum_probs=148.1
Q ss_pred ceEEEEEeecCCCceEEEE-EccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEE
Q 036314 66 AVSSVNIIKSDGLKYVTVA-TASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTIS 144 (347)
Q Consensus 66 ~V~~v~~~~~~~~~~~~l~-s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~ 144 (347)
...++++.+++ ..++ +.+.++.|.+|+..+.... .....+...+.+++++++|+++++.. ++.|.
T Consensus 25 ~p~~i~~~~~g----~l~v~~~~~~~~i~~~~~~~~~~~---------~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~ 90 (270)
T 1rwi_B 25 SPSGVAVDSAG----NVYVTSEGMYGRVVKLATGSTGTT---------VLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVV 90 (270)
T ss_dssp CEEEEEECTTC----CEEEEECSSSCEEEEECC-----E---------ECCCCSCCSCCCEEECTTCCEEEEET-TTEEE
T ss_pred CccceEECCCC----CEEEEccCCCCcEEEecCCCcccc---------eEeeCCcCCcceeEECCCCCEEEEcC-CCEEE
Confidence 45778887743 2455 5578889999987543211 01112334577899999999777665 88999
Q ss_pred EEecCCCCCCCccceeeeccCCCcccccccccccccccc-CCccceEEEEeC-CCCeEEEEecCCcEEEEECCCCceeee
Q 036314 145 LWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLV-GHTQCVSSVVWP-QQETIYSASWDHSVRTWDVEMGKDLSD 222 (347)
Q Consensus 145 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~-~~~~l~s~s~dg~v~vwd~~~~~~~~~ 222 (347)
+||...... ..+. ........+++. ++..+++...++.|.+||..+......
T Consensus 91 ~~d~~~~~~--------------------------~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~ 144 (270)
T 1rwi_B 91 TLAAGSNNQ--------------------------TVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVL 144 (270)
T ss_dssp EECTTCSCC--------------------------EECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEEC
T ss_pred EEeCCCceE--------------------------eeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEee
Confidence 998654211 0010 112345677774 566566666778899998655433221
Q ss_pred eeeC-eeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEE
Q 036314 223 IFCG-KALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWD 301 (347)
Q Consensus 223 ~~~~-~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd 301 (347)
.... ..+..+++.+++ .++++...++.|.+||..... .......+...+..+++++++ .++++...++.|.+||
T Consensus 145 ~~~~~~~p~~i~~~~~g-~l~v~~~~~~~i~~~~~~~~~---~~~~~~~~~~~p~~i~~d~~g-~l~v~~~~~~~v~~~~ 219 (270)
T 1rwi_B 145 PFTGLNDPDGVAVDNSG-NVYVTDTDNNRVVKLEAESNN---QVVLPFTDITAPWGIAVDEAG-TVYVTEHNTNQVVKLL 219 (270)
T ss_dssp CCCSCCSCCCEEECTTC-CEEEEEGGGTEEEEECTTTCC---EEECCCSSCCSEEEEEECTTC-CEEEEETTTSCEEEEC
T ss_pred ccccCCCceeEEEeCCC-CEEEEECCCCEEEEEecCCCc---eEeecccCCCCceEEEECCCC-CEEEEECCCCcEEEEc
Confidence 1111 245677886654 577777778899999976421 111112333568899999998 5567667788999999
Q ss_pred cCCCccceeecCCCCeEEEEeec-CCCEEEEccCCceEEEeecc
Q 036314 302 LRTAWPLSVIDSHKDKVLCADWW-RGDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 302 ~~~~~~~~~~~~h~~~v~~~~~~-~~~~l~s~s~D~~v~vw~~~ 344 (347)
.+..........+...+.++++. +|+.+++...+++|++++-.
T Consensus 220 ~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~ 263 (270)
T 1rwi_B 220 AGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSL 263 (270)
T ss_dssp TTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCC
T ss_pred CCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCC
Confidence 97654333222334578899996 47778888899999998765
No 194
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.41 E-value=2.4e-11 Score=118.98 Aligned_cols=247 Identities=14% Similarity=0.065 Sum_probs=147.8
Q ss_pred CcCCceeeccCC-CCCEEEEEecC-----CeEEEEcCC-CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCc---
Q 036314 22 LHDDWVSAVDGS-NPGFILTGCYD-----NLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQT--- 91 (347)
Q Consensus 22 ~h~~~v~~~~~~-~~~~l~sg~~d-----~~i~iw~~~-~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~--- 91 (347)
+|+..+..+++| ++++||.++.+ .+|++||+. |..+.. ..+...+..++|+|+ . .|+.++.|+.
T Consensus 160 ~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-~~~~~~~~~~~wspD-~----~l~~~~~~~~~~~ 233 (741)
T 1yr2_A 160 DGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD-ELKWVKFSGLAWLGN-D----ALLYSRFAEPKEG 233 (741)
T ss_dssp ---EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE-EEEEEESCCCEESTT-S----EEEEEECCCC---
T ss_pred CCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc-cCCCceeccEEEECC-C----EEEEEEecCcccc
Confidence 454567888888 55678776554 469999985 444332 222223457889885 3 4666665544
Q ss_pred -----------EEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCC-----cEEEEecCCCCCCC
Q 036314 92 -----------LRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDC-----TISLWRTNDSDAAG 155 (347)
Q Consensus 92 -----------v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg-----~I~iwd~~~~~~~~ 155 (347)
|++|++.+++.. .+.+.....|...+.++.|+|||++|+..+.++ .|.+||+.++..
T Consensus 234 ~~~~~~~~~~~v~~~~lgt~~~~-----~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~-- 306 (741)
T 1yr2_A 234 QAFQALNYNQTVWLHRLGTPQSA-----DQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKI-- 306 (741)
T ss_dssp -----CCCCCEEEEEETTSCGGG-----CEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEE--
T ss_pred cccccCCCCCEEEEEECCCCchh-----CEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCC--
Confidence 888988654310 112222223334588899999999888776544 788888764310
Q ss_pred ccceeeeccCCCccccccccccccccccCCccceEEEEeCCCCeEEEEecC----CcEEEEECCCCc-eeeeeeeC--ee
Q 036314 156 NQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQETIYSASWD----HSVRTWDVEMGK-DLSDIFCG--KA 228 (347)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d----g~v~vwd~~~~~-~~~~~~~~--~~ 228 (347)
.....+..+...+....+++++.|+..+.+ +.|.+||+.++. ....+... ..
T Consensus 307 ---------------------~~~~~l~~~~~~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~ 365 (741)
T 1yr2_A 307 ---------------------GPVTALIPDLKAQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDN 365 (741)
T ss_dssp ---------------------CCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSE
T ss_pred ---------------------cccEEecCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCe
Confidence 001122233333344445788888777654 349999987752 33333322 23
Q ss_pred eEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecC-CCCCeeEEEeCCCCCeEEEEEe---CCCcEEEEEcCC
Q 036314 229 LNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSS-HNSWISACKWHNKSWFHLISAS---YDGKVMLWDLRT 304 (347)
Q Consensus 229 ~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~-h~~~v~~v~~s~~~~~~l~s~s---~D~~i~lwd~~~ 304 (347)
+..+++. ++.++++...|+..+||.....+. ....+.. +...+..+.++|++..++++.+ ..++|.+||+.+
T Consensus 366 l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~g~--~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~t 441 (741)
T 1yr2_A 366 LESVGIA--GNRLFASYIHDAKSQVLAFDLDGK--PAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPAT 441 (741)
T ss_dssp EEEEEEE--BTEEEEEEEETTEEEEEEEETTSC--EEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTT
T ss_pred EEEEEEE--CCEEEEEEEECCEEEEEEEeCCCC--ceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCC
Confidence 4455554 456788888888877775432121 2344543 3567888999998876444443 347899999987
Q ss_pred Cc
Q 036314 305 AW 306 (347)
Q Consensus 305 ~~ 306 (347)
++
T Consensus 442 g~ 443 (741)
T 1yr2_A 442 AK 443 (741)
T ss_dssp TE
T ss_pred Cc
Confidence 65
No 195
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.38 E-value=4.2e-10 Score=96.68 Aligned_cols=207 Identities=11% Similarity=0.039 Sum_probs=136.2
Q ss_pred EEEEEccCCCcEEEEeccccccccCccccceeeeeeccc-cceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccce
Q 036314 81 VTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHK-ASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVS 159 (347)
Q Consensus 81 ~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~-~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~ 159 (347)
..|++++.|+.|.+||.++++. +-.+..+. ..++++++.|+|++++ +.++.|..||. +++
T Consensus 6 ~~lv~~~~~~~v~~~d~~tG~~---------~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~------- 66 (276)
T 3no2_A 6 HLLVGGSGWNKIAIINKDTKEI---------VWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGR------- 66 (276)
T ss_dssp EEEEECTTCSEEEEEETTTTEE---------EEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSC-------
T ss_pred cEEEeeCCCCEEEEEECCCCeE---------EEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCC-------
Confidence 5789999999999999877753 23444454 4688899999999988 45788999986 332
Q ss_pred eeeccCCCccccccccccccccccCC-ccceEEEEe-CCCCeEEEEec-CCcEEEEECCCCceeeeeeeCe-------ee
Q 036314 160 IKKRKGNNQVEEPQLEGEAISTLVGH-TQCVSSVVW-PQQETIYSASW-DHSVRTWDVEMGKDLSDIFCGK-------AL 229 (347)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~-~~~~~l~s~s~-dg~v~vwd~~~~~~~~~~~~~~-------~~ 229 (347)
.+..+..+ ...+.++.+ ++++.+++.+. ++.|..+|. +++.+..+.... ..
T Consensus 67 ------------------~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~ 127 (276)
T 3no2_A 67 ------------------ELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQF 127 (276)
T ss_dssp ------------------EEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSC
T ss_pred ------------------EEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccc
Confidence 12222222 124555554 68888888776 777777775 676665543211 12
Q ss_pred EEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccce
Q 036314 230 NCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLS 309 (347)
Q Consensus 230 ~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~ 309 (347)
..+...+ ++.++++...++.|..||.. .+ .+.++..+ ....++.+.+++. .+++++.+++|..+|.++|+.+-
T Consensus 128 ~~v~~~~-~G~~lv~~~~~~~v~~~d~~-G~---~~w~~~~~-~~~~~~~~~~~g~-~~v~~~~~~~v~~~d~~tG~~~w 200 (276)
T 3no2_A 128 RQINKNK-KGNYLVPLFATSEVREIAPN-GQ---LLNSVKLS-GTPFSSAFLDNGD-CLVACGDAHCFVQLNLESNRIVR 200 (276)
T ss_dssp SCCEECT-TSCEEEEETTTTEEEEECTT-SC---EEEEEECS-SCCCEEEECTTSC-EEEECBTTSEEEEECTTTCCEEE
T ss_pred cCceECC-CCCEEEEecCCCEEEEECCC-CC---EEEEEECC-CCccceeEcCCCC-EEEEeCCCCeEEEEeCcCCcEEE
Confidence 2233433 45688888899999999976 32 24555443 3455677788875 57777888899999999888776
Q ss_pred eecCCC------CeEEEEeec-CCCEEEEc
Q 036314 310 VIDSHK------DKVLCADWW-RGDSVISG 332 (347)
Q Consensus 310 ~~~~h~------~~v~~~~~~-~~~~l~s~ 332 (347)
++..+. ..+.++..- +|+.+++.
T Consensus 201 ~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 201 RVNANDIEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp EEEGGGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred EecCCCCCCccccccccceEcCCCCEEEEe
Confidence 664321 225555553 56665554
No 196
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.37 E-value=1.4e-10 Score=113.52 Aligned_cols=270 Identities=9% Similarity=-0.015 Sum_probs=154.9
Q ss_pred CCCEEEEEecCC---eEEEEc--CC----CeEEEEe------eccCCceEEEEEeecCCCceEEEEEccCC-----CcEE
Q 036314 34 NPGFILTGCYDN---LGRVWK--AG----GVCTHIL------EGHCGAVSSVNIIKSDGLKYVTVATASKD-----QTLR 93 (347)
Q Consensus 34 ~~~~l~sg~~d~---~i~iw~--~~----~~~~~~l------~~h~~~V~~v~~~~~~~~~~~~l~s~s~D-----g~v~ 93 (347)
+|++++....++ ...+|. .. +.....+ .+|...+..++|+|++. .||.++.+ .+|+
T Consensus 117 dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~----~la~~~~~~G~e~~~i~ 192 (741)
T 1yr2_A 117 RGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGR----LLAYSVQDGGSDWRTVK 192 (741)
T ss_dssp ETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSS----EEEEEEEETTCSEEEEE
T ss_pred ECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCC----EEEEEEcCCCCceEEEE
Confidence 466766655544 366674 22 2222222 23434678899998543 45544433 4699
Q ss_pred EEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCc--------------EEEEecCCCCCCCccce
Q 036314 94 LWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCT--------------ISLWRTNDSDAAGNQVS 159 (347)
Q Consensus 94 ~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~--------------I~iwd~~~~~~~~~~~~ 159 (347)
+||+.+++.+. ...+...+..++|+|| +.|+.++.|+. |++|++.++...
T Consensus 193 v~dl~tg~~~~----------~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~----- 256 (741)
T 1yr2_A 193 FVGVADGKPLA----------DELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSA----- 256 (741)
T ss_dssp EEETTTCCEEE----------EEEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGG-----
T ss_pred EEECCCCCCCC----------ccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchh-----
Confidence 99998875321 1112222356889999 98888877665 777877543210
Q ss_pred eeeccCCCccccccccccccccccCCccceEEEEe-CCCCeEEEEecCC-----cEEEEECCCC--ceeeeeeeCe-eeE
Q 036314 160 IKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDH-----SVRTWDVEMG--KDLSDIFCGK-ALN 230 (347)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg-----~v~vwd~~~~--~~~~~~~~~~-~~~ 230 (347)
...+.....+...+..+.| +++++|+..+.++ .|.+||+.++ .....+.... ...
T Consensus 257 ----------------~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~ 320 (741)
T 1yr2_A 257 ----------------DQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQW 320 (741)
T ss_dssp ----------------CEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCE
T ss_pred ----------------CEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceE
Confidence 0111122233334667777 5777887776544 7999999876 3133343222 222
Q ss_pred EEEeeCCCCcEEEEecC---CCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcC-CCc
Q 036314 231 CIDIGGEGSALIAAGGS---DPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLR-TAW 306 (347)
Q Consensus 231 ~~~~~~~~~~~la~~~~---d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~-~~~ 306 (347)
.. +.+++..+++.... ++.|.+||+..+. ......+..+...+..+.|+ +..++++...|+..+||.++ ++.
T Consensus 321 ~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~-~~~~~l~~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~g~ 396 (741)
T 1yr2_A 321 DF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGST-PRFDTVVPESKDNLESVGIA--GNRLFASYIHDAKSQVLAFDLDGK 396 (741)
T ss_dssp EE-EEEETTEEEEEECTTCTTCEEEEEECSSSS-CEEEEEECCCSSEEEEEEEE--BTEEEEEEEETTEEEEEEEETTSC
T ss_pred EE-EeccCCEEEEEECCCCCCCEEEEEeCCCCc-cccEEEecCCCCeEEEEEEE--CCEEEEEEEECCEEEEEEEeCCCC
Confidence 22 23445444433322 4569999986431 11122334444556677776 34678899999988888654 344
Q ss_pred cceeecC-CCCeEEEEeecC-CCEEE----EccCCceEEEeec
Q 036314 307 PLSVIDS-HKDKVLCADWWR-GDSVI----SGGVDSKLCVSSG 343 (347)
Q Consensus 307 ~~~~~~~-h~~~v~~~~~~~-~~~l~----s~s~D~~v~vw~~ 343 (347)
....+.. +.+.+..+.+++ ++.|+ +....++|.+|+.
T Consensus 397 ~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~ 439 (741)
T 1yr2_A 397 PAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDP 439 (741)
T ss_dssp EEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEET
T ss_pred ceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEEC
Confidence 5555554 367788888875 55554 4456788999874
No 197
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.37 E-value=5.3e-10 Score=97.34 Aligned_cols=243 Identities=9% Similarity=0.013 Sum_probs=147.2
Q ss_pred CceEEEEEeecCCCceEEEEE-------ccCCCcEEEEeccccccccCccccceee--eeeccccceEEEEEeCC-CCEE
Q 036314 65 GAVSSVNIIKSDGLKYVTVAT-------ASKDQTLRLWKFDAEELVNHPKKIRSFK--ILRGHKASVHSIAAETS-GNMV 134 (347)
Q Consensus 65 ~~V~~v~~~~~~~~~~~~l~s-------~s~Dg~v~~wd~~~~~~~~~~~~~~~~~--~~~~h~~~V~~v~~s~~-~~~l 134 (347)
....+++|.+++ ..+++ +..++.|.+||..+++.. .+. ...++...+.+++++++ |+++
T Consensus 18 ~~~~~~~~~~~g----~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~-------~~~~~~~~~~~~~~~~i~~~~~~g~l~ 86 (314)
T 1pjx_A 18 PGAEGPVFDKNG----DFYIVAPEVEVNGKPAGEILRIDLKTGKKT-------VICKPEVNGYGGIPAGCQCDRDANQLF 86 (314)
T ss_dssp TTCEEEEECTTS----CEEEEETTCEETTEECCEEEEECTTTCCEE-------EEECCEETTEECCEEEEEECSSSSEEE
T ss_pred CCccCceECCCC----CEEEEEeccccCCCCCCEEEEEeCCCCcEE-------EEEecccCCCCCCCceEEEecCCCcEE
Confidence 345678887533 24556 678899999997665421 110 01125567889999999 7655
Q ss_pred EEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccccccccccc-CCccceEEEEe-CCCCeEEEEecC------
Q 036314 135 CSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLV-GHTQCVSSVVW-PQQETIYSASWD------ 206 (347)
Q Consensus 135 ~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~-~~~~~l~s~s~d------ 206 (347)
++.. ...|.+||.. +... ... ..... .+...+.++++ +++..+++...+
T Consensus 87 v~~~-~~~l~~~d~~-g~~~----~~~-----------------~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~ 143 (314)
T 1pjx_A 87 VADM-RLGLLVVQTD-GTFE----EIA-----------------KKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPAD 143 (314)
T ss_dssp EEET-TTEEEEEETT-SCEE----ECC-----------------SBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSC
T ss_pred EEEC-CCCEEEEeCC-CCEE----EEE-----------------eccCCCccccCCcCEEECCCCCEEEEecCccccccc
Confidence 5544 4478888865 3210 000 00000 01133566776 455555555444
Q ss_pred ---------CcEEEEECCCCceeeeeeeCeeeEEEEee----CCCCcEEEEecCCCcEEEEeCCCCCCCC---CeEEecC
Q 036314 207 ---------HSVRTWDVEMGKDLSDIFCGKALNCIDIG----GEGSALIAAGGSDPILRIWDPRKPGTSA---PVFQFSS 270 (347)
Q Consensus 207 ---------g~v~vwd~~~~~~~~~~~~~~~~~~~~~~----~~~~~~la~~~~d~~i~iwd~~~~~~~~---~~~~~~~ 270 (347)
+.|..||.. ++.............+++. +++..++++...++.|.+||+...+... ....+.+
T Consensus 144 ~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~ 222 (314)
T 1pjx_A 144 YTRSMQEKFGSIYCFTTD-GQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPG 222 (314)
T ss_dssp CCBTTSSSCEEEEEECTT-SCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCC
T ss_pred ccccccCCCCeEEEECCC-CCEEEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCC
Confidence 467777765 4432222222234567776 6554556666678999999975211110 1223344
Q ss_pred CC-CCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeecC-CC-EEEEccCCceEEEeec
Q 036314 271 HN-SWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GD-SVISGGVDSKLCVSSG 343 (347)
Q Consensus 271 h~-~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~-~~-~l~s~s~D~~v~vw~~ 343 (347)
+. .....+++++++. +.++...++.|.+||.++++.+..+..+...+.+++|.+ |+ .+++...++.|..++.
T Consensus 223 ~~~~~p~~i~~d~~G~-l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~ 297 (314)
T 1pjx_A 223 THEGGADGMDFDEDNN-LLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEW 297 (314)
T ss_dssp CSSCEEEEEEEBTTCC-EEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred CCCCCCCceEECCCCC-EEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeC
Confidence 43 5678899999884 566666788999999987777777766767899999964 66 4556666788888764
No 198
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.33 E-value=1.2e-09 Score=95.10 Aligned_cols=238 Identities=12% Similarity=0.070 Sum_probs=141.1
Q ss_pred ceeeccCC-CCCEEEE-------EecCCeEEEEcC-CCeEEEEee----ccCCceEEEEEeecCCCceEEEEEccCCCcE
Q 036314 26 WVSAVDGS-NPGFILT-------GCYDNLGRVWKA-GGVCTHILE----GHCGAVSSVNIIKSDGLKYVTVATASKDQTL 92 (347)
Q Consensus 26 ~v~~~~~~-~~~~l~s-------g~~d~~i~iw~~-~~~~~~~l~----~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v 92 (347)
...+++++ ++.++++ +..++.|..|+. .+....... ++...+.++.+.++++ ..+++.. .+.|
T Consensus 19 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g---~l~v~~~-~~~l 94 (314)
T 1pjx_A 19 GAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDAN---QLFVADM-RLGL 94 (314)
T ss_dssp TCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSS---EEEEEET-TTEE
T ss_pred CccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCC---cEEEEEC-CCCE
Confidence 44566665 4566777 678899999996 454433222 2556788998887412 3344333 4478
Q ss_pred EEEeccccccccCccccceeeeee-ccccceEEEEEeCCCCEEEEeeCC---------------CcEEEEecCCCCCCCc
Q 036314 93 RLWKFDAEELVNHPKKIRSFKILR-GHKASVHSIAAETSGNMVCSGSWD---------------CTISLWRTNDSDAAGN 156 (347)
Q Consensus 93 ~~wd~~~~~~~~~~~~~~~~~~~~-~h~~~V~~v~~s~~~~~l~sgs~D---------------g~I~iwd~~~~~~~~~ 156 (347)
.+||.+ ++..... ..... .+...+.+++++++|+++++...+ +.|..|+.. ..
T Consensus 95 ~~~d~~-g~~~~~~-----~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~---- 163 (314)
T 1pjx_A 95 LVVQTD-GTFEEIA-----KKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQ---- 163 (314)
T ss_dssp EEEETT-SCEEECC-----SBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SC----
T ss_pred EEEeCC-CCEEEEE-----eccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CC----
Confidence 899987 5431110 00000 122457889999999988877655 445555432 11
Q ss_pred cceeeeccCCCccccccccccccccccCCccceEEEEeC-----CCCeEEEE-ecCCcEEEEECC-CCce-----eeeee
Q 036314 157 QVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP-----QQETIYSA-SWDHSVRTWDVE-MGKD-----LSDIF 224 (347)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-----~~~~l~s~-s~dg~v~vwd~~-~~~~-----~~~~~ 224 (347)
. ..+..+......+++. +++.++.+ ..++.|.+||+. .+.. ...+.
T Consensus 164 ~----------------------~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~ 221 (314)
T 1pjx_A 164 M----------------------IQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIP 221 (314)
T ss_dssp E----------------------EEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECC
T ss_pred E----------------------EEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECC
Confidence 0 0001111223455553 44455444 567899999976 3431 11111
Q ss_pred eC--eeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEc
Q 036314 225 CG--KALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDL 302 (347)
Q Consensus 225 ~~--~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~ 302 (347)
.. ..+..++++++ +.+.++...++.|.+||.+... ....+..+...+.+++|+|++..+.++...++.|..|++
T Consensus 222 ~~~~~~p~~i~~d~~-G~l~v~~~~~~~i~~~d~~~g~---~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~ 297 (314)
T 1pjx_A 222 GTHEGGADGMDFDED-NNLLVANWGSSHIEVFGPDGGQ---PKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEW 297 (314)
T ss_dssp CCSSCEEEEEEEBTT-CCEEEEEETTTEEEEECTTCBS---CSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred CCCCCCCCceEECCC-CCEEEEEcCCCEEEEEcCCCCc---EeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeC
Confidence 11 33566777665 4566666668899999976322 234455566789999999998755666667789999998
Q ss_pred CC
Q 036314 303 RT 304 (347)
Q Consensus 303 ~~ 304 (347)
..
T Consensus 298 ~~ 299 (314)
T 1pjx_A 298 QR 299 (314)
T ss_dssp SS
T ss_pred CC
Confidence 75
No 199
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.33 E-value=3.2e-11 Score=107.87 Aligned_cols=179 Identities=12% Similarity=0.018 Sum_probs=121.0
Q ss_pred ceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeCCCCeE
Q 036314 121 SVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQETI 200 (347)
Q Consensus 121 ~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l 200 (347)
+++.+++++...++++|+.| .+++|++.+.... ....... + +.. ....+.. |..++| ++..|
T Consensus 39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~-----~~~~~~~-------~--~~~-~~~~lp~-V~~l~f-d~~~L 100 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDH-----ITSDSTP-------L--TFK-WEKEIPD-VIFVCF-HGDQV 100 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHH-----HHSSSCC-------C--CCS-EEEECTT-EEEEEE-ETTEE
T ss_pred cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhh-----hcccccc-------c--cce-EEeeCCC-eeEEEE-CCCEE
Confidence 57889999999999999998 5556986532100 0000000 0 011 1123455 999999 88888
Q ss_pred EEEecCCcEEEEECCCCceeeeee-eCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEE
Q 036314 201 YSASWDHSVRTWDVEMGKDLSDIF-CGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACK 279 (347)
Q Consensus 201 ~s~s~dg~v~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~ 279 (347)
+.+ .++.|++||+++......+. ....+..+.+.++ + ++++..||.|.+||+.... ... +...|.+++
T Consensus 101 ~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p--~-~av~~~dG~L~v~dl~~~~----~~~---~~~~Vs~v~ 169 (388)
T 1xip_A 101 LVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNN--T-LVILNSVNDLSALDLRTKS----TKQ---LAQNVTSFD 169 (388)
T ss_dssp EEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSS--E-EEEEETTSEEEEEETTTCC----EEE---EEESEEEEE
T ss_pred EEE-cCCcEEEEEchhhhccCccceeecceeeEEecCC--C-EEEEECCCCEEEEEccCCc----ccc---ccCCceEEE
Confidence 887 88999999997755433332 2334555555443 2 7778899999999997432 112 456899999
Q ss_pred eCCCCCeEEEEEeCCCcEEEEEcCCCcc--ceee------c---CCCCeEEEEeec-CCCEEEE
Q 036314 280 WHNKSWFHLISASYDGKVMLWDLRTAWP--LSVI------D---SHKDKVLCADWW-RGDSVIS 331 (347)
Q Consensus 280 ~s~~~~~~l~s~s~D~~i~lwd~~~~~~--~~~~------~---~h~~~v~~~~~~-~~~~l~s 331 (347)
|+|+| ++.|..||++++|+.+..+. .+++ . +|...|.++.|. ++.++++
T Consensus 170 WSpkG---~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 170 VTNSQ---LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp ECSSE---EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred EcCCc---eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 99998 67799999999999986653 4445 3 478899999996 4555554
No 200
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.31 E-value=2.7e-09 Score=100.70 Aligned_cols=275 Identities=12% Similarity=0.015 Sum_probs=165.5
Q ss_pred CEEEEEecCCeEEEEcCC-CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEecc--ccccccCcccccee
Q 036314 36 GFILTGCYDNLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFD--AEELVNHPKKIRSF 112 (347)
Q Consensus 36 ~~l~sg~~d~~i~iw~~~-~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~--~~~~~~~~~~~~~~ 112 (347)
.++++...+++|.++|.. ++.+..+... ..+..+.|+|++ ++|++++.|+.|.+||+. +.+ ..
T Consensus 168 ~~~V~~~~~~~V~viD~~t~~v~~~i~~g-~~p~~v~~SpDG----r~lyv~~~dg~V~viD~~~~t~~---------~v 233 (567)
T 1qks_A 168 LFSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASG----RYLFVIGRDGKVNMIDLWMKEPT---------TV 233 (567)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTTS----CEEEEEETTSEEEEEETTSSSCC---------EE
T ss_pred eEEEEeCCCCeEEEEECCCCeEEEEEeCC-CCccceEECCCC----CEEEEEcCCCeEEEEECCCCCCc---------Ee
Confidence 367788888999999975 5666666533 346689999854 367788899999999985 332 23
Q ss_pred eeeeccccceEEEEEe----CCCCEEEEeeC-CCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCcc
Q 036314 113 KILRGHKASVHSIAAE----TSGNMVCSGSW-DCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQ 187 (347)
Q Consensus 113 ~~~~~h~~~V~~v~~s----~~~~~l~sgs~-Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 187 (347)
..+.... ....++|+ |||++++.++. +++|.++|..+.+...... .. +........|..
T Consensus 234 ~~i~~G~-~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~-~~--------------~~~~~~~~~~p~ 297 (567)
T 1qks_A 234 AEIKIGS-EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQS-TR--------------GMTYDEQEYHPE 297 (567)
T ss_dssp EEEECCS-EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEE-CC--------------EECTTTCCEESC
T ss_pred EEEecCC-CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEe-cc--------------ccccccccccCC
Confidence 3343323 35789999 69998876654 5999999976643211000 00 000000011212
Q ss_pred -ceEEEEeC-CCC-eEEEEecCCcEEEEECCCCcee--eeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCC
Q 036314 188 -CVSSVVWP-QQE-TIYSASWDHSVRTWDVEMGKDL--SDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTS 262 (347)
Q Consensus 188 -~v~~~~~~-~~~-~l~s~s~dg~v~vwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~ 262 (347)
.+..+..+ ++. .+++...+|.|.++|......+ ..+........+.|++++..++++...+++|.++|+....
T Consensus 298 ~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~k-- 375 (567)
T 1qks_A 298 PRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGK-- 375 (567)
T ss_dssp CCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTE--
T ss_pred CceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCc--
Confidence 34455543 333 4566677799999998765422 2222333455677888777677777778999999987432
Q ss_pred CCeEEec-----CCCCCeeEEEeCCCCCeEEEEEe-CCCcEEEEEcCC-------CccceeecCCCCeEEEEeecC-CCE
Q 036314 263 APVFQFS-----SHNSWISACKWHNKSWFHLISAS-YDGKVMLWDLRT-------AWPLSVIDSHKDKVLCADWWR-GDS 328 (347)
Q Consensus 263 ~~~~~~~-----~h~~~v~~v~~s~~~~~~l~s~s-~D~~i~lwd~~~-------~~~~~~~~~h~~~v~~~~~~~-~~~ 328 (347)
....+. .|......+ +.|++....+++. .+++|.++|.++ .+.++++......-..+..+| +++
T Consensus 376 -l~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~ 453 (567)
T 1qks_A 376 -LVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQY 453 (567)
T ss_dssp -EEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSE
T ss_pred -EEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCe
Confidence 122222 243322222 5787655556654 468999999987 455666654333323455665 455
Q ss_pred EEEcc---C----CceEEEeecc
Q 036314 329 VISGG---V----DSKLCVSSGV 344 (347)
Q Consensus 329 l~s~s---~----D~~v~vw~~~ 344 (347)
|.... . .++|.|++..
T Consensus 454 l~v~~~~~~~~~~~~~v~v~d~~ 476 (567)
T 1qks_A 454 LYVDATLNPEAEISGSVAVFDIK 476 (567)
T ss_dssp EEEECTTCSSHHHHTCEEEEEGG
T ss_pred EEEecCCCCCcccCceEEEEECC
Confidence 44322 1 3578887754
No 201
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.28 E-value=4.6e-08 Score=84.12 Aligned_cols=270 Identities=10% Similarity=-0.039 Sum_probs=164.6
Q ss_pred CCceeeccCC-CCCEEEEEecCCeEEEEcCCCeEEE-EeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccc
Q 036314 24 DDWVSAVDGS-NPGFILTGCYDNLGRVWKAGGVCTH-ILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEE 101 (347)
Q Consensus 24 ~~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~~~~~~-~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~ 101 (347)
...+.++... ++.+.++...++.|..|+..+.... .+..+...+.++.+.+++ ...++...++.|..||.. ++
T Consensus 19 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g----~l~v~~~~~~~v~~~d~~-g~ 93 (300)
T 2qc5_A 19 DSGPYGITSSEDGKVWFTQHKANKISSLDQSGRIKEFEVPTPDAKVMCLIVSSLG----DIWFTENGANKIGKLSKK-GG 93 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTS----CEEEEETTTTEEEEECTT-SC
T ss_pred CCCcceeeECCCCCEEEEcCCCCeEEEECCCCceEEEECCCCCCcceeEEECCCC----CEEEEecCCCeEEEECCC-CC
Confidence 3456677766 4566676667899999997755433 233344667888887643 245555667889999976 43
Q ss_pred cccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccccccccc
Q 036314 102 LVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAIST 181 (347)
Q Consensus 102 ~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (347)
.. . ..+......+.++++.++|+++++...++.|..|+.. +... ...
T Consensus 94 ~~-------~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~------------------------~~~ 140 (300)
T 2qc5_A 94 FT-------E-YPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIY------------------------EYD 140 (300)
T ss_dssp EE-------E-EECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEE------------------------EEE
T ss_pred eE-------E-ecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEE------------------------Ecc
Confidence 21 1 1122234568899999999988887778889998764 2110 000
Q ss_pred ccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeeeee---CeeeEEEEeeCCCCcEEEEecCCCcEEEEeCC
Q 036314 182 LVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDIFC---GKALNCIDIGGEGSALIAAGGSDPILRIWDPR 257 (347)
Q Consensus 182 ~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~ 257 (347)
+.........+++ ++++.+++...++.|..+|. +++... +.. ...+..+.+.++ +.+.++....+.|..||..
T Consensus 141 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~d~~-g~l~v~~~~~~~i~~~~~~ 217 (300)
T 2qc5_A 141 LPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEE-YPLPTNAAAPVGITSGND-GALWFVEIMGNKIGRITTT 217 (300)
T ss_dssp CSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECTT-SSEEEEETTTTEEEEECTT
T ss_pred CCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEE-eeCCCCCCCcceEEECCC-CCEEEEccCCCEEEEEcCC
Confidence 1112234567776 45565555555788999998 554332 221 224567777664 4666666667789999973
Q ss_pred CCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccc-eeecCCCCeEEEEeecC-CCEEEEccCC
Q 036314 258 KPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPL-SVIDSHKDKVLCADWWR-GDSVISGGVD 335 (347)
Q Consensus 258 ~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~-~~~~~h~~~v~~~~~~~-~~~l~s~s~D 335 (347)
+.. ....+..+...+.++++++++. +.++...++.|..||.. ++.. ..+......+.++.+.+ |+..++.. .
T Consensus 218 --g~~-~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-~ 291 (300)
T 2qc5_A 218 --GEI-SEYDIPTPNARPHAITAGKNSE-IWFTEWGANQIGRITND-NTIQEYQLQTENAEPHGITFGKDGSVWFALK-C 291 (300)
T ss_dssp --CCE-EEEECSSTTCCEEEEEECSTTC-EEEEETTTTEEEEECTT-SCEEEEECCSTTCCCCCEEECTTSCEEEECS-S
T ss_pred --CcE-EEEECCCCCCCceEEEECCCCC-EEEeccCCCeEEEECCC-CcEEEEECCccCCccceeEeCCCCCEEEEcc-C
Confidence 111 1222334556788999999975 45555567899999984 4322 12232345677777764 55555544 4
Q ss_pred ceEEEe
Q 036314 336 SKLCVS 341 (347)
Q Consensus 336 ~~v~vw 341 (347)
.|...
T Consensus 292 -~i~~~ 296 (300)
T 2qc5_A 292 -KIGKL 296 (300)
T ss_dssp -EEEEE
T ss_pred -ceEEe
Confidence 44443
No 202
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.28 E-value=7.3e-09 Score=94.06 Aligned_cols=232 Identities=12% Similarity=0.088 Sum_probs=148.2
Q ss_pred ceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCC--cE
Q 036314 66 AVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDC--TI 143 (347)
Q Consensus 66 ~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg--~I 143 (347)
....|+|.+++ ..+++...++.|++||.+++++. ....... ... ++|+++++.|+.+..++ .|
T Consensus 132 ~P~~la~d~~g----~lyv~d~~~~~I~~id~~~g~~~---------~~~~~~~-~~~-ia~~~~g~~l~~~d~~~~~~I 196 (409)
T 3hrp_A 132 YMWGIAAVGNN----TVLAYQRDDPRVRLISVDDNKVT---------TVHPGFK-GGK-PAVTKDKQRVYSIGWEGTHTV 196 (409)
T ss_dssp CEEEEEECSTT----EEEEEETTTTEEEEEETTTTEEE---------EEEETCC-BCB-CEECTTSSEEEEEBSSTTCEE
T ss_pred CceEEEEeCCC----CEEEEecCCCcEEEEECCCCEEE---------EeeccCC-CCc-eeEecCCCcEEEEecCCCceE
Confidence 45678887632 45677777899999998765431 1122222 233 89999999998888876 67
Q ss_pred EEEecCCCCCCCccceeeeccCCCccccccccccccccccC-CccceEEEEeCC-CCeEEEEecCCcEEEEECCCCceee
Q 036314 144 SLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVG-HTQCVSSVVWPQ-QETIYSASWDHSVRTWDVEMGKDLS 221 (347)
Q Consensus 144 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~-~~~l~s~s~dg~v~vwd~~~~~~~~ 221 (347)
.+++....... . .+..+.. ......++++.. +..|+.+..++.|..||..++...
T Consensus 197 ~~~d~~~~~~~---~-------------------~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~- 253 (409)
T 3hrp_A 197 YVYMKASGWAP---T-------------------RIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVT- 253 (409)
T ss_dssp EEEEGGGTTCE---E-------------------EEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEE-
T ss_pred EEEEcCCCcee---E-------------------EeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEE-
Confidence 77775432100 0 0000001 122344566643 667766777889999998876532
Q ss_pred ee----ee-Ceee--E-EEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCC---------------CCeeEE
Q 036314 222 DI----FC-GKAL--N-CIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHN---------------SWISAC 278 (347)
Q Consensus 222 ~~----~~-~~~~--~-~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~---------------~~v~~v 278 (347)
.+ .. .... . .+++++.++.++++...++.|+.||... . ...+.++. .....+
T Consensus 254 ~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g--~---~~~~~g~~~~~g~~dg~~~~~~~~~P~gi 328 (409)
T 3hrp_A 254 LIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDG--E---CEWFCGSATQKTVQDGLREEALFAQPNGM 328 (409)
T ss_dssp EEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTC--C---EEEEEECTTCCSCBCEEGGGCBCSSEEEE
T ss_pred EEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCC--C---EEEEEeCCCCCCcCCCcccccEeCCCeEE
Confidence 22 11 1111 2 7889886777888888889999998753 1 23333332 457789
Q ss_pred EeCCCCCeEEEEEe-CCCcEEEEEcCCCccceeecCC---------------CCeEEEEeecC-CCEEEEccCCceEEEe
Q 036314 279 KWHNKSWFHLISAS-YDGKVMLWDLRTAWPLSVIDSH---------------KDKVLCADWWR-GDSVISGGVDSKLCVS 341 (347)
Q Consensus 279 ~~s~~~~~~l~s~s-~D~~i~lwd~~~~~~~~~~~~h---------------~~~v~~~~~~~-~~~l~s~s~D~~v~vw 341 (347)
+++|++. ++++-+ .+++|+.||+.+++ +.++.++ -....++++.+ |..+++-..+++|+..
T Consensus 329 a~d~dG~-lyvad~~~~~~I~~~~~~~G~-v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i 406 (409)
T 3hrp_A 329 TVDEDGN-FYIVDGFKGYCLRKLDILDGY-VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKY 406 (409)
T ss_dssp EECTTCC-EEEEETTTTCEEEEEETTTTE-EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEE
T ss_pred EEeCCCC-EEEEeCCCCCEEEEEECCCCE-EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEE
Confidence 9999986 677777 88999999977665 4444443 13578888875 6677777778888765
Q ss_pred e
Q 036314 342 S 342 (347)
Q Consensus 342 ~ 342 (347)
+
T Consensus 407 ~ 407 (409)
T 3hrp_A 407 A 407 (409)
T ss_dssp E
T ss_pred E
Confidence 4
No 203
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.25 E-value=4.9e-10 Score=100.17 Aligned_cols=181 Identities=10% Similarity=0.053 Sum_probs=120.5
Q ss_pred ceEEEEEeecCCCceEEEEEccCCCcEEEEeccccc--cccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcE
Q 036314 66 AVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEE--LVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTI 143 (347)
Q Consensus 66 ~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~--~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I 143 (347)
.++.+++++..+ .+++|+.| .+++|+++..+ ........++.. ...+.. |+.++| |+++|+.+ .++.|
T Consensus 39 ~~nlLais~~~g----ll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~-~~~lp~-V~~l~f--d~~~L~v~-~~~~l 108 (388)
T 1xip_A 39 SLQNLDISNSKS----LFVAASGS-KAVVGELQLLRDHITSDSTPLTFKW-EKEIPD-VIFVCF--HGDQVLVS-TRNAL 108 (388)
T ss_dssp CCBCEEEETTTT----EEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSE-EEECTT-EEEEEE--ETTEEEEE-ESSEE
T ss_pred cccEEEEcCCCC----EEEEeCCC-EEEEEEhhHhhhhhccccccccceE-EeeCCC-eeEEEE--CCCEEEEE-cCCcE
Confidence 578899988655 57888887 57779976443 100111112211 223566 999999 88999988 89999
Q ss_pred EEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeCCCCeEEEEecCCcEEEEECCCCceeeee
Q 036314 144 SLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDI 223 (347)
Q Consensus 144 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~ 223 (347)
++||+.+... ......|...+.++.+... .++.++.||.|.+||+.++....
T Consensus 109 ~v~dv~sl~~-------------------------~~~~~~~~~~v~~i~~~~p-~~av~~~dG~L~v~dl~~~~~~~-- 160 (388)
T 1xip_A 109 YSLDLEELSE-------------------------FRTVTSFEKPVFQLKNVNN-TLVILNSVNDLSALDLRTKSTKQ-- 160 (388)
T ss_dssp EEEESSSTTC-------------------------EEEEEECSSCEEEEEECSS-EEEEEETTSEEEEEETTTCCEEE--
T ss_pred EEEEchhhhc-------------------------cCccceeecceeeEEecCC-CEEEEECCCCEEEEEccCCcccc--
Confidence 9999875421 1112234455666665322 38889999999999998776532
Q ss_pred eeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEe------c---CCCCCeeEEEeCCCCCeEEEE
Q 036314 224 FCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQF------S---SHNSWISACKWHNKSWFHLIS 290 (347)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~------~---~h~~~v~~v~~s~~~~~~l~s 290 (347)
....+.|++|++.+ ++.|..||++++|++.... .....++ . +|...|.++.|.+++.. |++
T Consensus 161 -~~~~Vs~v~WSpkG---~~vg~~dg~i~~~~~~~~~-~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~f-lv~ 230 (388)
T 1xip_A 161 -LAQNVTSFDVTNSQ---LAVLLKDRSFQSFAWRNGE-MEKQFEFSLPSELEELPVEEYSPLSVTILSPQDF-LAV 230 (388)
T ss_dssp -EEESEEEEEECSSE---EEEEETTSCEEEEEEETTE-EEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEE-EEE
T ss_pred -ccCCceEEEEcCCc---eEEEEcCCcEEEEcCCCcc-ccccceecCCcccccccCCCeeEEEEEEecCCeE-EEE
Confidence 34568999998765 5678889999999875321 0002234 2 47788999999998753 444
No 204
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.23 E-value=4.7e-08 Score=84.04 Aligned_cols=238 Identities=11% Similarity=0.002 Sum_probs=149.9
Q ss_pred eeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeC
Q 036314 60 LEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSW 139 (347)
Q Consensus 60 l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~ 139 (347)
+..+...+.++++.+++. ..++...++.|.+||.. ++.. . ..+..+...+.+++++++|.++++...
T Consensus 10 ~~~~~~~~~~i~~d~~g~----l~v~~~~~~~v~~~d~~-~~~~-------~-~~~~~~~~~~~~i~~~~~g~l~v~~~~ 76 (299)
T 2z2n_A 10 LTNQDTGPYGITVSDKGK----VWITQHKANMISCINLD-GKIT-------E-YPLPTPDAKVMCLTISSDGEVWFTENA 76 (299)
T ss_dssp CCSSSCCEEEEEECTTSC----EEEEETTTTEEEEECTT-CCEE-------E-EECSSTTCCEEEEEECTTSCEEEEETT
T ss_pred CCCcCCCccceEECCCCC----EEEEecCCCcEEEEcCC-CCeE-------E-ecCCcccCceeeEEECCCCCEEEeCCC
Confidence 344556788998877432 45555557899999976 4321 1 111234567899999999998888777
Q ss_pred CCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeC-CCCeEEEEecCCcEEEEECCCCc
Q 036314 140 DCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP-QQETIYSASWDHSVRTWDVEMGK 218 (347)
Q Consensus 140 Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~l~s~s~dg~v~vwd~~~~~ 218 (347)
++.|..|+... . .. ...+......+.++++. ++..+++...++.|.+||. +++
T Consensus 77 ~~~i~~~~~~g-~----~~--------------------~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~ 130 (299)
T 2z2n_A 77 ANKIGRITKKG-I----IK--------------------EYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGK 130 (299)
T ss_dssp TTEEEEECTTS-C----EE--------------------EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCC
T ss_pred CCeEEEECCCC-c----EE--------------------EEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCC
Confidence 88999998641 1 00 00011122346677774 5555666666789999998 554
Q ss_pred eeeeee--eCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCc
Q 036314 219 DLSDIF--CGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGK 296 (347)
Q Consensus 219 ~~~~~~--~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~ 296 (347)
...... ....+..+.+.+++ .+.++...++.|..||. . +.. ....+..+...+..+++.+++. +.++...++.
T Consensus 131 ~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~-~-g~~-~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~ 205 (299)
T 2z2n_A 131 IREYELPNKGSYPSFITLGSDN-ALWFTENQNNAIGRITE-S-GDI-TEFKIPTPASGPVGITKGNDDA-LWFVEIIGNK 205 (299)
T ss_dssp EEEEECSSTTCCEEEEEECTTS-CEEEEETTTTEEEEECT-T-CCE-EEEECSSTTCCEEEEEECTTSS-EEEEETTTTE
T ss_pred EEEecCCCCCCCCceEEEcCCC-CEEEEeCCCCEEEEEcC-C-CcE-EEeeCCCCCCcceeEEECCCCC-EEEEccCCce
Confidence 322111 12346777886554 56666666789999997 3 221 1122334455688999999875 4565566789
Q ss_pred EEEEEcCCCccce-eecCCCCeEEEEeec-CCCEEEEccCCceEEEee
Q 036314 297 VMLWDLRTAWPLS-VIDSHKDKVLCADWW-RGDSVISGGVDSKLCVSS 342 (347)
Q Consensus 297 i~lwd~~~~~~~~-~~~~h~~~v~~~~~~-~~~~l~s~s~D~~v~vw~ 342 (347)
|.+||. +++... .+..+...+.++.+. +|+.+++...++.|.+++
T Consensus 206 i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d 252 (299)
T 2z2n_A 206 IGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLT 252 (299)
T ss_dssp EEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEE
T ss_pred EEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEEC
Confidence 999999 554322 123345678899986 466666655677788776
No 205
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.20 E-value=1.6e-07 Score=84.07 Aligned_cols=258 Identities=11% Similarity=-0.009 Sum_probs=150.0
Q ss_pred eEEEEcCC-CeEEEEeeccCCceEEEEEeecCCCceEEEEEcc----------CCCcEEEEeccccccccCccccceeee
Q 036314 46 LGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATAS----------KDQTLRLWKFDAEELVNHPKKIRSFKI 114 (347)
Q Consensus 46 ~i~iw~~~-~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s----------~Dg~v~~wd~~~~~~~~~~~~~~~~~~ 114 (347)
+|.++|.. ++.+..+..-..+ .++++|++. .|+.+. .++.|.+||..+.+......-... ..
T Consensus 48 ~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~----~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~-~~ 120 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGGFLP--NPVAAHSGS----EFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDA-PR 120 (373)
T ss_pred EEEEEECCCCeEEEEecCCCCC--CeEECCCCC----EEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCc-cc
Confidence 88999974 5555555533333 899999553 455443 467899999876543211000000 00
Q ss_pred eeccccceEEEEEeCCCCEEEEeeC--CCcEEEEecCCCCCCCccceeeeccCCCcccccccccccccc-ccCCccceEE
Q 036314 115 LRGHKASVHSIAAETSGNMVCSGSW--DCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAIST-LVGHTQCVSS 191 (347)
Q Consensus 115 ~~~h~~~V~~v~~s~~~~~l~sgs~--Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~h~~~v~~ 191 (347)
+. +......++++|||++|+.++. +++|.++| .+... +.. +.. ..++
T Consensus 121 ~~-~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~-------------------------~~~~i~~-~~~~-- 170 (373)
T 2mad_H 121 FD-VGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSS-------------------------DDQLLSS-PTCY-- 170 (373)
T ss_pred cc-cCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCE-------------------------EeEEcCC-CceE--
Confidence 00 0122457899999999998874 57899999 76432 111 110 1111
Q ss_pred EEeCCC-CeEEEEecCCcEEEEECCCCceeeeee-----eC-eee-EEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCC
Q 036314 192 VVWPQQ-ETIYSASWDHSVRTWDVEMGKDLSDIF-----CG-KAL-NCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSA 263 (347)
Q Consensus 192 ~~~~~~-~~l~s~s~dg~v~vwd~~~~~~~~~~~-----~~-~~~-~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~ 263 (347)
..++.+ ..+++.+.||.+.++|. +++...... .. .++ ....+.+.++.++... ..+.+.+.|+.... ..
T Consensus 171 ~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~v~vid~~~~~-~~ 247 (373)
T 2mad_H 171 HIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPV-YSGKILQADISAAG-AT 247 (373)
T ss_pred EEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEc-CCceEEEEeccCCc-ce
Confidence 123443 35667788999999999 776552221 11 111 1122333344444443 57889999986321 11
Q ss_pred CeEEecC----------CCCCeeEEEeCCCCCeEEEEEe---------CCCcEEEEEcCCCccceeecCCCCeEEEEeec
Q 036314 264 PVFQFSS----------HNSWISACKWHNKSWFHLISAS---------YDGKVMLWDLRTAWPLSVIDSHKDKVLCADWW 324 (347)
Q Consensus 264 ~~~~~~~----------h~~~v~~v~~s~~~~~~l~s~s---------~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~ 324 (347)
....+.- .......+.++|++.++.++.. .++.|.++|..+++.+.++.. .....++.|+
T Consensus 248 v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~-g~~p~~i~~s 326 (373)
T 2mad_H 248 NKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL-GHDVDAISVA 326 (373)
T ss_pred EeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEEC-CCCcCeEEEC
Confidence 1111110 0122334778999876555443 235799999999988888753 3357899998
Q ss_pred C-CC-EEEEcc-CCceEEEeecc
Q 036314 325 R-GD-SVISGG-VDSKLCVSSGV 344 (347)
Q Consensus 325 ~-~~-~l~s~s-~D~~v~vw~~~ 344 (347)
+ |+ ++.++. .+++|.|++.-
T Consensus 327 ~Dg~~~l~v~~~~~~~V~ViD~~ 349 (373)
T 2mad_H 327 QDGGPDLYALSAGTEVLHIYDAG 349 (373)
T ss_pred CCCCeEEEEEcCCCCeEEEEECC
Confidence 5 66 577766 58999999865
No 206
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.18 E-value=6.1e-08 Score=83.95 Aligned_cols=219 Identities=11% Similarity=0.053 Sum_probs=135.7
Q ss_pred ceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEE
Q 036314 66 AVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISL 145 (347)
Q Consensus 66 ~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~i 145 (347)
---+..|+++.+ ..+++...++.|..||..+++. ..+ .+...+.+++++++|+++++. +..|.+
T Consensus 14 ~~Egp~w~~~~~---~l~~~d~~~~~i~~~d~~~~~~----------~~~-~~~~~~~~i~~~~dG~l~v~~--~~~l~~ 77 (297)
T 3g4e_A 14 CGESPVWEEVSN---SLLFVDIPAKKVCRWDSFTKQV----------QRV-TMDAPVSSVALRQSGGYVATI--GTKFCA 77 (297)
T ss_dssp BEEEEEEETTTT---EEEEEETTTTEEEEEETTTCCE----------EEE-ECSSCEEEEEEBTTSSEEEEE--TTEEEE
T ss_pred cccCCeEECCCC---EEEEEECCCCEEEEEECCCCcE----------EEE-eCCCceEEEEECCCCCEEEEE--CCeEEE
Confidence 344677877443 3567778889999999876532 112 234678999999999966643 568889
Q ss_pred EecCCCCCCCccceeeeccCCCcccccccccccccccc--CCccceEEEEe-CCCCeEEEEecC---------CcEEEEE
Q 036314 146 WRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLV--GHTQCVSSVVW-PQQETIYSASWD---------HSVRTWD 213 (347)
Q Consensus 146 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~~~~-~~~~~l~s~s~d---------g~v~vwd 213 (347)
||..+.... .+.... .....++.+++ ++++.+++...+ ..-.||.
T Consensus 78 ~d~~~g~~~-----------------------~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~ 134 (297)
T 3g4e_A 78 LNWKEQSAV-----------------------VLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYS 134 (297)
T ss_dssp EETTTTEEE-----------------------EEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEE
T ss_pred EECCCCcEE-----------------------EEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEE
Confidence 987643210 000000 01223566776 456654443221 2345555
Q ss_pred CCC-CceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCC-CCCCCC---CeEEecCCCCCeeEEEeCCCCCeEE
Q 036314 214 VEM-GKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPR-KPGTSA---PVFQFSSHNSWISACKWHNKSWFHL 288 (347)
Q Consensus 214 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~-~~~~~~---~~~~~~~h~~~v~~v~~s~~~~~~l 288 (347)
+.. ++...........+.+++++++..++++.+.++.|..||+. ..+... ....+..+......+++.++|. +.
T Consensus 135 ~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~-lw 213 (297)
T 3g4e_A 135 LFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGK-LW 213 (297)
T ss_dssp ECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSC-EE
T ss_pred EECCCCEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCC-EE
Confidence 433 33222122222356788887766666777778999999874 111111 1223333445678899999984 56
Q ss_pred EEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeec
Q 036314 289 ISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWW 324 (347)
Q Consensus 289 ~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~ 324 (347)
++...++.|.+||.++++.+..+..+...+.+++|.
T Consensus 214 va~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~ 249 (297)
T 3g4e_A 214 VACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFG 249 (297)
T ss_dssp EEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEE
T ss_pred EEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEe
Confidence 666677889999999888888887777789999996
No 207
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.17 E-value=4.6e-09 Score=102.07 Aligned_cols=241 Identities=12% Similarity=0.095 Sum_probs=139.3
Q ss_pred ccCCceEEEEEeecCCCceEEEE-----EccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEE
Q 036314 62 GHCGAVSSVNIIKSDGLKYVTVA-----TASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCS 136 (347)
Q Consensus 62 ~h~~~V~~v~~~~~~~~~~~~l~-----s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~s 136 (347)
+|...+..+.|+|++. .|| .|+++.+|++||+.+++.+. ..+.+. ....++|+ ||+.|+.
T Consensus 126 ~~~~~l~~~~~SpDg~----~lAy~~~~~G~~~~~i~v~dl~tg~~~~--------~~~~~~--k~~~~~Ws-Dg~~l~y 190 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGR----ILAYSLSLAGSDWREIHLMDVESKQPLE--------TPLKDV--KFSGISWL-GNEGFFY 190 (693)
T ss_dssp TSCCEEEEEEECTTSS----EEEEEEECSSCCEEEEEEEETTTCSEEE--------EEEEEE--ESCCCEEE-TTTEEEE
T ss_pred CCcEEEEEEEECCCCC----EEEEEEecCCCceEEEEEEECCCCCCCc--------cccCCc--eeccEEEe-CCCEEEE
Confidence 3555688889998543 454 34455689999998875321 112111 12467899 9998988
Q ss_pred eeCCCc-------------EEEEecCCCCCCCccceeeeccCCCccccccccccccccccC-CccceEEEEe-CCCCeEE
Q 036314 137 GSWDCT-------------ISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVG-HTQCVSSVVW-PQQETIY 201 (347)
Q Consensus 137 gs~Dg~-------------I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~-~~~~~l~ 201 (347)
++.|.. |++|++.+.... ...+..... |.....++.| +++++|+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~---------------------~~~v~~~~~~~~~~~~~~~~SpDg~~l~ 249 (693)
T 3iuj_A 191 SSYDKPDGSELSARTDQHKVYFHRLGTAQED---------------------DRLVFGAIPAQHHRYVGATVTEDDRFLL 249 (693)
T ss_dssp EESSCCC-------CCCCEEEEEETTSCGGG---------------------CEEEESCSGGGCCSEEEEEECTTSCEEE
T ss_pred EEecCcccccccccCCCcEEEEEECCCCccc---------------------ceEEEecCCCCCeEEEEEEEcCCCCEEE
Confidence 887754 888887653210 111222223 3344566666 5777764
Q ss_pred E-Eec---CCcEEEEECCCCc-eeeeeeeCe-eeEEEEeeCCCCcEEEEecCC---CcEEEEeCCCCCCCCCeEEecCCC
Q 036314 202 S-ASW---DHSVRTWDVEMGK-DLSDIFCGK-ALNCIDIGGEGSALIAAGGSD---PILRIWDPRKPGTSAPVFQFSSHN 272 (347)
Q Consensus 202 s-~s~---dg~v~vwd~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~la~~~~d---~~i~iwd~~~~~~~~~~~~~~~h~ 272 (347)
. .+. ++.|.++|+.++. ....+.... ..... +.++++.+++.+..+ +.|..+|+..+. ......+..|.
T Consensus 250 ~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~-~~~~~~l~~~~ 327 (693)
T 3iuj_A 250 ISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPG-PAHWRDLIPER 327 (693)
T ss_dssp EEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCC-GGGCEEEECCC
T ss_pred EEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCC-ccccEEEecCC
Confidence 3 332 2478999997763 233343222 22222 445566666665443 678999987532 11234566677
Q ss_pred CCeeEEEeCCCCCeEEEEEeCCC--cEEEEEcCCCccceeec-CCCCeEEEEeec-CCCEEEEccCC----ceEEEeec
Q 036314 273 SWISACKWHNKSWFHLISASYDG--KVMLWDLRTAWPLSVID-SHKDKVLCADWW-RGDSVISGGVD----SKLCVSSG 343 (347)
Q Consensus 273 ~~v~~v~~s~~~~~~l~s~s~D~--~i~lwd~~~~~~~~~~~-~h~~~v~~~~~~-~~~~l~s~s~D----~~v~vw~~ 343 (347)
..+. .|++++..++++...|+ .|++||++.+. ...+. .+.+.+..+.++ +++.|+-...+ ++|..|+.
T Consensus 328 ~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~-~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~ 403 (693)
T 3iuj_A 328 QQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGKR-VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEP 403 (693)
T ss_dssp SSCE--EEEEETTEEEEEEEETTEEEEEEECTTSCE-EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECT
T ss_pred CCEE--EEEEECCEEEEEEEECCeeEEEEEECCCCe-eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEEC
Confidence 6665 78888877555555665 68899987543 34432 344566677776 34443322222 66776653
No 208
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.13 E-value=2.3e-07 Score=79.74 Aligned_cols=237 Identities=7% Similarity=-0.044 Sum_probs=147.0
Q ss_pred eccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCC
Q 036314 61 EGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWD 140 (347)
Q Consensus 61 ~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~D 140 (347)
......+.++.+.+++ ...++...++.|.+||.. ++.. . ..+..+...+.+++++++|+++++...+
T Consensus 16 ~~~~~~p~~i~~d~~g----~l~v~~~~~~~v~~~~~~-~~~~-------~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~ 82 (300)
T 2qc5_A 16 SIPDSGPYGITSSEDG----KVWFTQHKANKISSLDQS-GRIK-------E-FEVPTPDAKVMCLIVSSLGDIWFTENGA 82 (300)
T ss_dssp SSTTCCEEEEEECTTS----CEEEEETTTTEEEEECTT-SCEE-------E-EECSSTTCCEEEEEECTTSCEEEEETTT
T ss_pred CCCCCCcceeeECCCC----CEEEEcCCCCeEEEECCC-CceE-------E-EECCCCCCcceeEEECCCCCEEEEecCC
Confidence 3344567888887643 245566678899999976 4321 1 1122334668899999999988877778
Q ss_pred CcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeC-CCCeEEEEecCCcEEEEECCCCce
Q 036314 141 CTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP-QQETIYSASWDHSVRTWDVEMGKD 219 (347)
Q Consensus 141 g~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~l~s~s~dg~v~vwd~~~~~~ 219 (347)
+.|..||.. +.. . ...+......+.++++. ++..+++...++.|..+|.. ++.
T Consensus 83 ~~v~~~d~~-g~~----~--------------------~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~ 136 (300)
T 2qc5_A 83 NKIGKLSKK-GGF----T--------------------EYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTI 136 (300)
T ss_dssp TEEEEECTT-SCE----E--------------------EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCE
T ss_pred CeEEEECCC-CCe----E--------------------EecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCE
Confidence 889999865 211 0 00011112346677764 55555655557889999986 543
Q ss_pred eee-ee-eCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcE
Q 036314 220 LSD-IF-CGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKV 297 (347)
Q Consensus 220 ~~~-~~-~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i 297 (347)
... +. ....+..+.+.+++ .+.++...++.|..||.. . .. .......+...+..+++.+++. +.++...++.|
T Consensus 137 ~~~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~i~~~~~~-g-~~-~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~i 211 (300)
T 2qc5_A 137 YEYDLPNKGSYPAFITLGSDN-ALWFTENQNNSIGRITNT-G-KL-EEYPLPTNAAAPVGITSGNDGA-LWFVEIMGNKI 211 (300)
T ss_dssp EEEECSSTTCCEEEEEECTTS-SEEEEETTTTEEEEECTT-C-CE-EEEECSSTTCCEEEEEECTTSS-EEEEETTTTEE
T ss_pred EEccCCCCCCCceeEEECCCC-CEEEEecCCCeEEEECCC-C-cE-EEeeCCCCCCCcceEEECCCCC-EEEEccCCCEE
Confidence 321 11 12346777776654 466666667889999973 2 21 1222334456788999999874 45555566789
Q ss_pred EEEEcCCCccce-eecCCCCeEEEEeec-CCCEEEEccCCceEEEee
Q 036314 298 MLWDLRTAWPLS-VIDSHKDKVLCADWW-RGDSVISGGVDSKLCVSS 342 (347)
Q Consensus 298 ~lwd~~~~~~~~-~~~~h~~~v~~~~~~-~~~~l~s~s~D~~v~vw~ 342 (347)
.+||. +++... .+..+...+.++.+. +|+..++...++.|..++
T Consensus 212 ~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~ 257 (300)
T 2qc5_A 212 GRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRIT 257 (300)
T ss_dssp EEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEC
T ss_pred EEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEEC
Confidence 99998 444322 233345678888886 466666655667787775
No 209
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.11 E-value=1.1e-08 Score=99.46 Aligned_cols=244 Identities=10% Similarity=-0.002 Sum_probs=139.6
Q ss_pred CcCCceeeccCCC-CCEEE-----EEecCCeEEEEcCC-CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCC----
Q 036314 22 LHDDWVSAVDGSN-PGFIL-----TGCYDNLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQ---- 90 (347)
Q Consensus 22 ~h~~~v~~~~~~~-~~~l~-----sg~~d~~i~iw~~~-~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg---- 90 (347)
+|...+..+++|+ +++|| .|+.+.+|++||+. |..+.. .-+......++|+ ++. .|+.++.|.
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-~~~~~k~~~~~Ws-Dg~----~l~y~~~~~~~~~ 199 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET-PLKDVKFSGISWL-GNE----GFFYSSYDKPDGS 199 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-EEEEEESCCCEEE-TTT----EEEEEESSCCC--
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc-ccCCceeccEEEe-CCC----EEEEEEecCcccc
Confidence 4667788888885 55666 23334689999985 444332 1111113567888 553 355555553
Q ss_pred ---------cEEEEeccccccccCccccceeeeeec-cccceEEEEEeCCCCEEE-Eee---CCCcEEEEecCCCCCCCc
Q 036314 91 ---------TLRLWKFDAEELVNHPKKIRSFKILRG-HKASVHSIAAETSGNMVC-SGS---WDCTISLWRTNDSDAAGN 156 (347)
Q Consensus 91 ---------~v~~wd~~~~~~~~~~~~~~~~~~~~~-h~~~V~~v~~s~~~~~l~-sgs---~Dg~I~iwd~~~~~~~~~ 156 (347)
.|++|++.++.. ..+.+..... |.....++.++|||++|+ +.+ .+..|.++|+.++..
T Consensus 200 ~~~~~~~~~~v~~~~lgt~~~-----~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~--- 271 (693)
T 3iuj_A 200 ELSARTDQHKVYFHRLGTAQE-----DDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENA--- 271 (693)
T ss_dssp -----CCCCEEEEEETTSCGG-----GCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTC---
T ss_pred cccccCCCcEEEEEECCCCcc-----cceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCC---
Confidence 499999865431 1112222233 445578899999999775 333 235889998865421
Q ss_pred cceeeeccCCCccccccccccccccccCCccceEEEEeCCCCeEE-EEecC---CcEEEEECCCCce--eeeeeeC-eee
Q 036314 157 QVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQETIY-SASWD---HSVRTWDVEMGKD--LSDIFCG-KAL 229 (347)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~-s~s~d---g~v~vwd~~~~~~--~~~~~~~-~~~ 229 (347)
....+..+.........++++.|+ .+..+ +.|..+|+.++.. ...+... ..+
T Consensus 272 ---------------------~~~~l~~~~~~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~ 330 (693)
T 3iuj_A 272 ---------------------PLLTVQGDLDADVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQV 330 (693)
T ss_dssp ---------------------CCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSC
T ss_pred ---------------------ceEEEeCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCE
Confidence 112233333344443335556554 43333 5688899887643 2233222 222
Q ss_pred EEEEeeCCCCcEEEEecCCC--cEEEEeCCCCCCCCCeEEec-CCCCCeeEEEeCCCCCeEEEEEeCC---CcEEEEEcC
Q 036314 230 NCIDIGGEGSALIAAGGSDP--ILRIWDPRKPGTSAPVFQFS-SHNSWISACKWHNKSWFHLISASYD---GKVMLWDLR 303 (347)
Q Consensus 230 ~~~~~~~~~~~~la~~~~d~--~i~iwd~~~~~~~~~~~~~~-~h~~~v~~v~~s~~~~~~l~s~s~D---~~i~lwd~~ 303 (347)
. .+++.+..++++...++ .|++||+... ....+. .+...+..+.++|++..++++.+.. +++..||+.
T Consensus 331 ~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~----~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~ 404 (693)
T 3iuj_A 331 L--TVHSGSGYLFAEYMVDATARVEQFDYEGK----RVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPK 404 (693)
T ss_dssp E--EEEEETTEEEEEEEETTEEEEEEECTTSC----EEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred E--EEEEECCEEEEEEEECCeeEEEEEECCCC----eeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECC
Confidence 2 66666655655555555 6888887621 123332 2445677788888887655554432 789999987
Q ss_pred CCc
Q 036314 304 TAW 306 (347)
Q Consensus 304 ~~~ 306 (347)
+++
T Consensus 405 ~g~ 407 (693)
T 3iuj_A 405 SGA 407 (693)
T ss_dssp TCC
T ss_pred CCe
Confidence 764
No 210
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.07 E-value=4e-07 Score=79.94 Aligned_cols=224 Identities=9% Similarity=0.023 Sum_probs=133.4
Q ss_pred EEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEe
Q 036314 68 SSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWR 147 (347)
Q Consensus 68 ~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd 147 (347)
.+..|+++++ ..+++...++.|..||..+++. ..+. +...+.+++++++|+++++. .+ .|.+||
T Consensus 52 egp~~~~~~~---~l~~~d~~~~~i~~~d~~~~~~----------~~~~-~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d 115 (326)
T 2ghs_A 52 EGPTFDPASG---TAWWFNILERELHELHLASGRK----------TVHA-LPFMGSALAKISDSKQLIAS-DD-GLFLRD 115 (326)
T ss_dssp EEEEEETTTT---EEEEEEGGGTEEEEEETTTTEE----------EEEE-CSSCEEEEEEEETTEEEEEE-TT-EEEEEE
T ss_pred cCCeEeCCCC---EEEEEECCCCEEEEEECCCCcE----------EEEE-CCCcceEEEEeCCCeEEEEE-CC-CEEEEE
Confidence 4567877533 3567777889999999876532 1121 24578999999999877754 44 488898
Q ss_pred cCCCCCCCccceeeeccCCCcccccccccccccccc--CCccceEEEEe-CCCCeEEEEec------CCcEEEEECCCCc
Q 036314 148 TNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLV--GHTQCVSSVVW-PQQETIYSASW------DHSVRTWDVEMGK 218 (347)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~~~~-~~~~~l~s~s~------dg~v~vwd~~~~~ 218 (347)
..++... . +.... .....+..+.+ +++..+++... .+.|..+| +++
T Consensus 116 ~~~g~~~----~-------------------~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~ 170 (326)
T 2ghs_A 116 TATGVLT----L-------------------HAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGK 170 (326)
T ss_dssp TTTCCEE----E-------------------EECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTE
T ss_pred CCCCcEE----E-------------------EeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCc
Confidence 7653210 0 00000 01234667777 45555444332 23455555 443
Q ss_pred eeeeeee-CeeeEEEEeeCCCCcEEEEecCCCcEEEEeCC-CCC-CCCC---eEEecCCCCCeeEEEeCCCCCeEEEEEe
Q 036314 219 DLSDIFC-GKALNCIDIGGEGSALIAAGGSDPILRIWDPR-KPG-TSAP---VFQFSSHNSWISACKWHNKSWFHLISAS 292 (347)
Q Consensus 219 ~~~~~~~-~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~-~~~-~~~~---~~~~~~h~~~v~~v~~s~~~~~~l~s~s 292 (347)
. ..+.. ......+++++++..++++...++.|.+||+. ..+ .... ...+.........+.+.+++. +.++..
T Consensus 171 ~-~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~-lwva~~ 248 (326)
T 2ghs_A 171 V-TKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGH-IWNARW 248 (326)
T ss_dssp E-EEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSC-EEEEEE
T ss_pred E-EEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCC-EEEEEe
Confidence 2 22221 12346778877665565666778899999975 112 1111 122333345567889999885 455555
Q ss_pred CCCcEEEEEcCCCccceeecCCCCeEEEEeec-C-CCEE-EEccCC
Q 036314 293 YDGKVMLWDLRTAWPLSVIDSHKDKVLCADWW-R-GDSV-ISGGVD 335 (347)
Q Consensus 293 ~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~-~-~~~l-~s~s~D 335 (347)
.++.|.+||. +++.+..+..+...+.+++|. + ++.| ++...+
T Consensus 249 ~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 249 GEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp TTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTTSCEEEEEEBCT
T ss_pred CCCEEEEECC-CCCEEEEEECCCCCcEEEEEecCCCCEEEEEecCC
Confidence 6688999998 466667777666789999996 5 4443 444333
No 211
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.05 E-value=1.3e-07 Score=85.83 Aligned_cols=237 Identities=10% Similarity=0.060 Sum_probs=139.8
Q ss_pred CceeeccCC-CCCEEEEEecCCeEEEEcCCC-eEEEEeeccCCceEEEEEeecCCCceEEEEEccCCC--cEEEEecccc
Q 036314 25 DWVSAVDGS-NPGFILTGCYDNLGRVWKAGG-VCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQ--TLRLWKFDAE 100 (347)
Q Consensus 25 ~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~~-~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg--~v~~wd~~~~ 100 (347)
.....++++ ++.++++...++.|+.||..+ ........ ..... ++|.++++ .|+.+..++ .|.+|+...+
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~-~~~~~-ia~~~~g~----~l~~~d~~~~~~I~~~d~~~~ 204 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPG-FKGGK-PAVTKDKQ----RVYSIGWEGTHTVYVYMKASG 204 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEET-CCBCB-CEECTTSS----EEEEEBSSTTCEEEEEEGGGT
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeecc-CCCCc-eeEecCCC----cEEEEecCCCceEEEEEcCCC
Confidence 345667766 455677777778999999874 44433333 23233 88887543 466666655 6888876543
Q ss_pred ccccCccccceeeeeec-cccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccccccc
Q 036314 101 ELVNHPKKIRSFKILRG-HKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAI 179 (347)
Q Consensus 101 ~~~~~~~~~~~~~~~~~-h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (347)
.. .+.+..+.. +...+.+++++|++..|+.+..++.|+.||...... . .....
T Consensus 205 ~~------~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~----~-~~~~~--------------- 258 (409)
T 3hrp_A 205 WA------PTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEV----T-LIKQL--------------- 258 (409)
T ss_dssp TC------EEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCE----E-EEEEC---------------
T ss_pred ce------eEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCE----E-EEecc---------------
Confidence 21 011111112 445678899999544454467788999999765321 0 00000
Q ss_pred ccccCCccce--EEEEe-CCCCe-EEEEecCCcEEEEECCCCceeeeeeeC----------------eeeEEEEeeCCCC
Q 036314 180 STLVGHTQCV--SSVVW-PQQET-IYSASWDHSVRTWDVEMGKDLSDIFCG----------------KALNCIDIGGEGS 239 (347)
Q Consensus 180 ~~~~~h~~~v--~~~~~-~~~~~-l~s~s~dg~v~vwd~~~~~~~~~~~~~----------------~~~~~~~~~~~~~ 239 (347)
...++.... ..+++ +++.. +++-..++.|+.||.... +..+... .....+++.+++
T Consensus 259 -~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG- 334 (409)
T 3hrp_A 259 -ELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDG- 334 (409)
T ss_dssp -CCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTC-
T ss_pred -cccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCC-
Confidence 001111111 26776 43454 455566788999986533 2222111 125678887664
Q ss_pred cEEEEec-CCCcEEEEeCCCCCCCCCeEEecCC---------------CCCeeEEEeCCCCCeEEEEEeCCCcEEEEEc
Q 036314 240 ALIAAGG-SDPILRIWDPRKPGTSAPVFQFSSH---------------NSWISACKWHNKSWFHLISASYDGKVMLWDL 302 (347)
Q Consensus 240 ~~la~~~-~d~~i~iwd~~~~~~~~~~~~~~~h---------------~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~ 302 (347)
.++++-. .++.|+.||+... .+.++.++ ......++++|++ .++++-..+++|+.+++
T Consensus 335 ~lyvad~~~~~~I~~~~~~~G----~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g-~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 335 NFYIVDGFKGYCLRKLDILDG----YVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEG-GYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp CEEEEETTTTCEEEEEETTTT----EEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSS-EEEEEESTTCEEEEEEE
T ss_pred CEEEEeCCCCCEEEEEECCCC----EEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCC-CEEEEECCCCeEEEEEe
Confidence 4777777 8899999996432 13444444 2457889999985 56777778888988775
No 212
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.00 E-value=1.5e-07 Score=83.79 Aligned_cols=255 Identities=10% Similarity=0.032 Sum_probs=151.7
Q ss_pred CCeEEEEcCC-CeEEEEeeccCCceEEEEEeecCCCceEEEEEcc----------CCCcEEEEeccccccccCcccccee
Q 036314 44 DNLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATAS----------KDQTLRLWKFDAEELVNHPKKIRSF 112 (347)
Q Consensus 44 d~~i~iw~~~-~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s----------~Dg~v~~wd~~~~~~~~~~~~~~~~ 112 (347)
+++|.+.|.. ++.+..+..-..+ .++++|++. .|+.++ .++.|.+||..+.+..
T Consensus 58 ~~~V~ViD~~t~~v~~~I~vG~~P--~va~spDG~----~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~--------- 122 (386)
T 3sjl_D 58 VTQQFVIDGEAGRVIGMIDGGFLP--NPVVADDGS----FIAHASTVFSRIARGERTDYVEVFDPVTLLPT--------- 122 (386)
T ss_dssp SEEEEEEETTTTEEEEEEEECSSC--EEEECTTSS----CEEEEEEEEEETTEEEEEEEEEEECTTTCCEE---------
T ss_pred CCEEEEEECCCCeEEEEEECCCCC--cEEECCCCC----EEEEEcccccccccCCCCCEEEEEECCCCeEE---------
Confidence 6789999975 5556665533333 489999654 344433 4678999999876532
Q ss_pred eeeecc-------ccceEEEEEeCCCCEEEEeeC--CCcEEEEecCCCCCCCccceeeeccCCCcccccccccccccccc
Q 036314 113 KILRGH-------KASVHSIAAETSGNMVCSGSW--DCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLV 183 (347)
Q Consensus 113 ~~~~~h-------~~~V~~v~~s~~~~~l~sgs~--Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (347)
..+.-. ......++|+|||++++.+.. +++|.++|+.+... +.++.
T Consensus 123 ~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~v-------------------------v~tI~ 177 (386)
T 3sjl_D 123 ADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAF-------------------------KRMLD 177 (386)
T ss_dssp EEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEE-------------------------EEEEE
T ss_pred EEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcE-------------------------EEEEE
Confidence 222110 112345899999999887764 68999999886421 11221
Q ss_pred CCccceEEEEeCC-CCeEEEEecCCcEEEEECCC-Cceeeee---ee-C-eee-EEEEeeCCCCcEEEEecCCCcEEEEe
Q 036314 184 GHTQCVSSVVWPQ-QETIYSASWDHSVRTWDVEM-GKDLSDI---FC-G-KAL-NCIDIGGEGSALIAAGGSDPILRIWD 255 (347)
Q Consensus 184 ~h~~~v~~~~~~~-~~~l~s~s~dg~v~vwd~~~-~~~~~~~---~~-~-~~~-~~~~~~~~~~~~la~~~~d~~i~iwd 255 (347)
-. .+ ...+|. .+.+++.+.||++.+.++.+ ++..... .. . .++ ....+...++.++. .+.++.|++.|
T Consensus 178 v~-g~--~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d 253 (386)
T 3sjl_D 178 VP-DC--YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQID 253 (386)
T ss_dssp CC-SE--EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEE
T ss_pred CC-Cc--ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEE
Confidence 11 11 123443 35677888899999999876 4432211 10 0 111 11233334554433 45579999999
Q ss_pred CCCCCCCCCeEEec---------C-CCCCeeEEEeCCCCCeEEEEEeC---------CCcEEEEEcCCCccceeecCCCC
Q 036314 256 PRKPGTSAPVFQFS---------S-HNSWISACKWHNKSWFHLISASY---------DGKVMLWDLRTAWPLSVIDSHKD 316 (347)
Q Consensus 256 ~~~~~~~~~~~~~~---------~-h~~~v~~v~~s~~~~~~l~s~s~---------D~~i~lwd~~~~~~~~~~~~h~~ 316 (347)
...... .....+. + .......++++|++.++.++... ..+|-+.|+++++.+..+.- ..
T Consensus 254 ~~~~~~-~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~v-g~ 331 (386)
T 3sjl_D 254 LSSGDA-KFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM-GH 331 (386)
T ss_dssp CTTSSC-EECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE-EE
T ss_pred CCCCcc-eeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEEC-CC
Confidence 864321 1111111 0 01123347778888775555432 25799999999988887743 23
Q ss_pred eEEEEeecC-CC-EE-EEccCCceEEEeecc
Q 036314 317 KVLCADWWR-GD-SV-ISGGVDSKLCVSSGV 344 (347)
Q Consensus 317 ~v~~~~~~~-~~-~l-~s~s~D~~v~vw~~~ 344 (347)
.++++.+++ ++ +| ++...+++|.|++..
T Consensus 332 ~~~~lavs~D~~~~ly~tn~~~~~VsViD~~ 362 (386)
T 3sjl_D 332 EIDSINVSQDEKPLLYALSTGDKTLYIHDAE 362 (386)
T ss_dssp EECEEEECSSSSCEEEEEETTTTEEEEEETT
T ss_pred CcceEEECCCCCeEEEEEcCCCCeEEEEECC
Confidence 678999985 54 44 445669999999875
No 213
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.99 E-value=2.1e-07 Score=80.75 Aligned_cols=239 Identities=12% Similarity=0.050 Sum_probs=138.2
Q ss_pred EEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEe
Q 036314 58 HILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSG 137 (347)
Q Consensus 58 ~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sg 137 (347)
..+...........|+++++ ..+++...++.|..|+.. ++ ...+..+...+..++++++|+++++.
T Consensus 38 ~~l~~~~~~~egp~~~~~g~---~l~~~d~~~~~i~~~~~~-g~----------~~~~~~~~~~~~gl~~d~dG~l~v~~ 103 (305)
T 3dr2_A 38 LTLYDQATWSEGPAWWEAQR---TLVWSDLVGRRVLGWRED-GT----------VDVLLDATAFTNGNAVDAQQRLVHCE 103 (305)
T ss_dssp EEEECCCSSEEEEEEEGGGT---EEEEEETTTTEEEEEETT-SC----------EEEEEESCSCEEEEEECTTSCEEEEE
T ss_pred EEEecCCcCccCCeEeCCCC---EEEEEECCCCEEEEEeCC-CC----------EEEEeCCCCccceeeECCCCCEEEEE
Confidence 34444445567788888543 357788888999999873 22 12344456678999999999977766
Q ss_pred eCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCC-ccceEEEEe-CCCCeEEE----Eec------
Q 036314 138 SWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGH-TQCVSSVVW-PQQETIYS----ASW------ 205 (347)
Q Consensus 138 s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~-~~~~~l~s----~s~------ 205 (347)
..++.|.+|+.. +.. .... ....+. ...+..+++ +++..+++ +..
T Consensus 104 ~~~~~v~~~~~~-g~~----~~~~------------------~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~ 160 (305)
T 3dr2_A 104 HGRRAITRSDAD-GQA----HLLV------------------GRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGC 160 (305)
T ss_dssp TTTTEEEEECTT-SCE----EEEE------------------CEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSC
T ss_pred CCCCEEEEECCC-CCE----EEEE------------------eccCCCccCCCCCEEECCCCCEEEeCcCCCcccccccc
Confidence 666889999864 210 0000 000000 012344555 45555554 322
Q ss_pred -------CCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecC-----CCcEEEEeCCCCCCCCCeEEe-cCCC
Q 036314 206 -------DHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGS-----DPILRIWDPRKPGTSAPVFQF-SSHN 272 (347)
Q Consensus 206 -------dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~-----d~~i~iwd~~~~~~~~~~~~~-~~h~ 272 (347)
.+.|..||..+++..... .......+++++++..++++... .+.|..||+.... ......+ ....
T Consensus 161 ~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~ 238 (305)
T 3dr2_A 161 PADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASVPD 238 (305)
T ss_dssp CCCCSSSCEEEEEECSSSCCCEEEE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECCSS
T ss_pred ccccccCCCeEEEEcCCCCcEEEEe-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEECCC
Confidence 245777787666543222 22234678887766545444443 2789999976321 1111111 1123
Q ss_pred CCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeecC-CCEEEEccCCceEEE
Q 036314 273 SWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GDSVISGGVDSKLCV 340 (347)
Q Consensus 273 ~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~D~~v~v 340 (347)
.....+++.++|. |..+..+ .|.+||.+ ++.+..+..+. .+.+++|.+ ++.|..++.++..++
T Consensus 239 ~~pdgi~~d~~G~--lwv~~~~-gv~~~~~~-g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~l~~~ 302 (305)
T 3dr2_A 239 GLPDGFCVDRGGW--LWSSSGT-GVCVFDSD-GQLLGHIPTPG-TASNCTFDQAQQRLFITGGPCLWML 302 (305)
T ss_dssp SCCCSEEECTTSC--EEECCSS-EEEEECTT-SCEEEEEECSS-CCCEEEECTTSCEEEEEETTEEEEE
T ss_pred CCCCeEEECCCCC--EEEecCC-cEEEECCC-CCEEEEEECCC-ceeEEEEeCCCCEEEEEcCCeEEEE
Confidence 3445688888885 4444544 49999984 66666665544 578889974 555555555655444
No 214
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.98 E-value=3.6e-07 Score=81.72 Aligned_cols=271 Identities=11% Similarity=0.056 Sum_probs=147.3
Q ss_pred CCCEEEEEecCCeEEEEcCC-CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCcccccee
Q 036314 34 NPGFILTGCYDNLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSF 112 (347)
Q Consensus 34 ~~~~l~sg~~d~~i~iw~~~-~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~ 112 (347)
.++.+..++.|+.+..+|.. |+.+..............+. ++ .++.++.++.|..+|..+++..-........
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~--~~----~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~ 175 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVS--DG----LVLIHTSNGQLQALNEADGAVKWTVNLDMPS 175 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEE--TT----EEEEECTTSEEEEEETTTCCEEEEEECCC--
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEE--CC----EEEEEcCCCeEEEEECCCCcEEEEEeCCCCc
Confidence 35677788889999999974 77665554332221122222 21 4677888999999998877532110000000
Q ss_pred eeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccccccccccc-CCccceEE
Q 036314 113 KILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLV-GHTQCVSS 191 (347)
Q Consensus 113 ~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~ 191 (347)
..+.+...++ .. +..++.++.++.+..+|..++...... ........ ..+..+. ....++
T Consensus 176 ~~~~~~~~~~----~~--~~~v~~g~~~g~l~~~d~~tG~~~w~~------~~~~~~~~-----~~~~~~~~~~~~p~-- 236 (376)
T 3q7m_A 176 LSLRGESAPT----TA--FGAAVVGGDNGRVSAVLMEQGQMIWQQ------RISQATGS-----TEIDRLSDVDTTPV-- 236 (376)
T ss_dssp ---CCCCCCE----EE--TTEEEECCTTTEEEEEETTTCCEEEEE------ECCC----------------CCCCCCE--
T ss_pred eeecCCCCcE----EE--CCEEEEEcCCCEEEEEECCCCcEEEEE------ecccCCCC-----cccccccccCCCcE--
Confidence 0011111221 12 346777888999999998765321100 00000000 0000000 001111
Q ss_pred EEeCCCCeEEEEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEec-C
Q 036314 192 VVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFS-S 270 (347)
Q Consensus 192 ~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~-~ 270 (347)
-.+..++.++.++.+..+|.++++.+-...... ...... .++ .+..++.++.+..+|..... .+.... .
T Consensus 237 ---~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~~-~~~~~~--~~~-~l~~~~~~g~l~~~d~~tG~---~~w~~~~~ 306 (376)
T 3q7m_A 237 ---VVNGVVFALAYNGNLTALDLRSGQIMWKRELGS-VNDFIV--DGN-RIYLVDQNDRVMALTIDGGV---TLWTQSDL 306 (376)
T ss_dssp ---EETTEEEEECTTSCEEEEETTTCCEEEEECCCC-EEEEEE--ETT-EEEEEETTCCEEEEETTTCC---EEEEECTT
T ss_pred ---EECCEEEEEecCcEEEEEECCCCcEEeeccCCC-CCCceE--ECC-EEEEEcCCCeEEEEECCCCc---EEEeeccc
Confidence 124677788889999999999987664433222 223333 233 45566778999999986432 233332 1
Q ss_pred CCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeecCCCEEEEccCCceEEEee
Q 036314 271 HNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGGVDSKLCVSS 342 (347)
Q Consensus 271 h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~D~~v~vw~ 342 (347)
....+...... + . .|..++.+|.+..+|.++++.+..+......+.+.....+..|..++.||.|..++
T Consensus 307 ~~~~~~~~~~~-~-~-~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 307 LHRLLTSPVLY-N-G-NLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVAADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp TTSCCCCCEEE-T-T-EEEEECTTSEEEEEETTTCCEEEEEECCTTCBCSCCEEETTEEEEEBTTSCEEEEE
T ss_pred CCCcccCCEEE-C-C-EEEEEeCCCeEEEEECCCCcEEEEEecCCCcceeCCEEECCEEEEEeCCCEEEEEe
Confidence 12222223332 2 2 48888999999999999998776655433333321111355777788899998875
No 215
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.96 E-value=1e-06 Score=76.18 Aligned_cols=216 Identities=13% Similarity=0.146 Sum_probs=130.0
Q ss_pred CCEEEEEecCCeEEEEcCCCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeee
Q 036314 35 PGFILTGCYDNLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKI 114 (347)
Q Consensus 35 ~~~l~sg~~d~~i~iw~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~ 114 (347)
+.++++...++.|..||..+.....+. ....+.++++.+++. +++ +. ++.|.+||.+++++. .+..
T Consensus 25 ~~l~~~d~~~~~i~~~d~~~~~~~~~~-~~~~~~~i~~~~dG~----l~v-~~-~~~l~~~d~~~g~~~-------~~~~ 90 (297)
T 3g4e_A 25 NSLLFVDIPAKKVCRWDSFTKQVQRVT-MDAPVSSVALRQSGG----YVA-TI-GTKFCALNWKEQSAV-------VLAT 90 (297)
T ss_dssp TEEEEEETTTTEEEEEETTTCCEEEEE-CSSCEEEEEEBTTSS----EEE-EE-TTEEEEEETTTTEEE-------EEEE
T ss_pred CEEEEEECCCCEEEEEECCCCcEEEEe-CCCceEEEEECCCCC----EEE-EE-CCeEEEEECCCCcEE-------EEEe
Confidence 457777778899999998643333332 446789999987543 333 33 567999998765421 1111
Q ss_pred eec--cccceEEEEEeCCCCEEEEeeCC---------CcEEEEecCCCCCCCccceeeeccCCCcccccccccccccccc
Q 036314 115 LRG--HKASVHSIAAETSGNMVCSGSWD---------CTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLV 183 (347)
Q Consensus 115 ~~~--h~~~V~~v~~s~~~~~l~sgs~D---------g~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (347)
... ....++.++++++|+++++...+ ...+||.+.... . ...+.
T Consensus 91 ~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g---~----------------------~~~~~ 145 (297)
T 3g4e_A 91 VDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH---H----------------------VKKYF 145 (297)
T ss_dssp CCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS---C----------------------EEEEE
T ss_pred cCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC---C----------------------EEEEe
Confidence 111 12447889999999977754322 334566554210 0 00011
Q ss_pred CCccceEEEEe-CCCCeE-EEEecCCcEEEEEC--CCCceee--eee---e-CeeeEEEEeeCCCCcEEEEecCCCcEEE
Q 036314 184 GHTQCVSSVVW-PQQETI-YSASWDHSVRTWDV--EMGKDLS--DIF---C-GKALNCIDIGGEGSALIAAGGSDPILRI 253 (347)
Q Consensus 184 ~h~~~v~~~~~-~~~~~l-~s~s~dg~v~vwd~--~~~~~~~--~~~---~-~~~~~~~~~~~~~~~~la~~~~d~~i~i 253 (347)
.+-...+.++| ++++.| ++.+.++.|.+||+ .++.... .+. . ...+..+++.+++ ++.++...++.|..
T Consensus 146 ~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G-~lwva~~~~~~v~~ 224 (297)
T 3g4e_A 146 DQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEG-KLWVACYNGGRVIR 224 (297)
T ss_dssp EEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTS-CEEEEEETTTEEEE
T ss_pred eccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCC-CEEEEEcCCCEEEE
Confidence 11223467777 466665 45566788999987 4554321 111 1 1245667776654 56666666788999
Q ss_pred EeCCCCCCCCCeEEecCCCCCeeEEEeC-CCCCeEEEEEeC
Q 036314 254 WDPRKPGTSAPVFQFSSHNSWISACKWH-NKSWFHLISASY 293 (347)
Q Consensus 254 wd~~~~~~~~~~~~~~~h~~~v~~v~~s-~~~~~~l~s~s~ 293 (347)
||+... ..+..+..+...+.+++|. |++..+.++...
T Consensus 225 ~d~~tG---~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~~ 262 (297)
T 3g4e_A 225 LDPVTG---KRLQTVKLPVDKTTSCCFGGKNYSEMYVTCAR 262 (297)
T ss_dssp ECTTTC---CEEEEEECSSSBEEEEEEESGGGCEEEEEEBC
T ss_pred EcCCCc---eEEEEEECCCCCceEEEEeCCCCCEEEEEcCC
Confidence 998632 2345666666789999998 777665565554
No 216
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.86 E-value=3e-09 Score=95.30 Aligned_cols=191 Identities=12% Similarity=0.077 Sum_probs=96.8
Q ss_pred EEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceee
Q 036314 82 TVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIK 161 (347)
Q Consensus 82 ~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~ 161 (347)
.|++++.||.|+.||..+++.. -.+.. +++.+..+..++..+++++.|+.|+.||..+++...
T Consensus 11 ~v~~gs~dg~v~a~d~~tG~~~---------W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w------ 73 (369)
T 2hz6_A 11 LLFVSTLDGSLHAVSKRTGSIK---------WTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLT------ 73 (369)
T ss_dssp EEEEEETTSEEEEEETTTCCEE---------EEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSE------
T ss_pred EEEEEcCCCEEEEEECCCCCEE---------EEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceee------
Confidence 5888999999999999887632 12222 344444455677888888999999999987653211
Q ss_pred eccCCCccccccccccccccccCCcc-ceE-EEEeCCCCeEEEEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCC
Q 036314 162 KRKGNNQVEEPQLEGEAISTLVGHTQ-CVS-SVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGS 239 (347)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~h~~-~v~-~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (347)
.+..+.. .+. +.....++.+++++.|+.|..||.++|+.+-.+..... ..+.+ .+
T Consensus 74 -------------------~~~~~~~~~~~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~---~~~~p-~~ 130 (369)
T 2hz6_A 74 -------------------KLPFTIPELVQASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA---DSLSP-ST 130 (369)
T ss_dssp -------------------ECSCCHHHHHTTCSCC-----CCCCEEEEEEEEECCC------------------------
T ss_pred -------------------eeeccCccccccCceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc---ccccc-cC
Confidence 0000000 000 00111345677888999999999999987654433221 22333 34
Q ss_pred cEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCC---CeEEEEEeCCCcEEEEEcCCCccceeecCCCC
Q 036314 240 ALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKS---WFHLISASYDGKVMLWDLRTAWPLSVIDSHKD 316 (347)
Q Consensus 240 ~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~---~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~ 316 (347)
..+++++.|+.|+.||.+.... .-....... ....+.++. . .++.++.||.+..||.++++.+-.+.- ..
T Consensus 131 ~~v~~~~~dg~v~a~d~~tG~~-~W~~~~~~~----~~~~~~~~~~~~~-~v~~~~~dg~v~a~d~~tG~~~W~~~~-~~ 203 (369)
T 2hz6_A 131 SLLYLGRTEYTITMYDTKTREL-RWNATYFDY----AASLPEDDVDYKM-SHFVSNGDGLVVTVDSESGDVLWIQNY-AS 203 (369)
T ss_dssp --EEEEEEEEEEECCCSSSSSC-CCEEEEEEE----CCBCCCCCTTCCC-CEEEEETSCEEEEECTTTCCEEEEEEC-SS
T ss_pred CEEEEEecCCEEEEEECCCCCE-EEeEecccc----cCccccCCccccc-eEEEECCCCEEEEEECCCCcEEEEecC-CC
Confidence 4667788899999999875422 111222211 222333321 2 377789999999999999876655442 33
Q ss_pred eEE
Q 036314 317 KVL 319 (347)
Q Consensus 317 ~v~ 319 (347)
++.
T Consensus 204 pv~ 206 (369)
T 2hz6_A 204 PVV 206 (369)
T ss_dssp CEE
T ss_pred ceE
Confidence 444
No 217
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.85 E-value=9.9e-07 Score=76.50 Aligned_cols=222 Identities=11% Similarity=0.135 Sum_probs=127.3
Q ss_pred CceeeccCC-CCC-EEEEEecCCeEEEEcCCCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEecccccc
Q 036314 25 DWVSAVDGS-NPG-FILTGCYDNLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEEL 102 (347)
Q Consensus 25 ~~v~~~~~~-~~~-~l~sg~~d~~i~iw~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~ 102 (347)
.+.....++ +++ +++++..++.|..|+..+. ...+..+...+..+.+.+++ ..+++...++.|.+|+.+ ++.
T Consensus 45 ~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g~-~~~~~~~~~~~~gl~~d~dG----~l~v~~~~~~~v~~~~~~-g~~ 118 (305)
T 3dr2_A 45 TWSEGPAWWEAQRTLVWSDLVGRRVLGWREDGT-VDVLLDATAFTNGNAVDAQQ----RLVHCEHGRRAITRSDAD-GQA 118 (305)
T ss_dssp SSEEEEEEEGGGTEEEEEETTTTEEEEEETTSC-EEEEEESCSCEEEEEECTTS----CEEEEETTTTEEEEECTT-SCE
T ss_pred cCccCCeEeCCCCEEEEEECCCCEEEEEeCCCC-EEEEeCCCCccceeeECCCC----CEEEEECCCCEEEEECCC-CCE
Confidence 344455544 455 6778878899999998665 34556666778899998743 345555556789999875 321
Q ss_pred ccCccccceee-eeec-cccceEEEEEeCCCCEEEE----eeC-------------CCcEEEEecCCCCCCCccceeeec
Q 036314 103 VNHPKKIRSFK-ILRG-HKASVHSIAAETSGNMVCS----GSW-------------DCTISLWRTNDSDAAGNQVSIKKR 163 (347)
Q Consensus 103 ~~~~~~~~~~~-~~~~-h~~~V~~v~~s~~~~~l~s----gs~-------------Dg~I~iwd~~~~~~~~~~~~~~~~ 163 (347)
. .+. ...+ ....++.++++++|++.+| |.. .+.|..|+..++..
T Consensus 119 ~-------~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~---------- 181 (305)
T 3dr2_A 119 H-------LLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPL---------- 181 (305)
T ss_dssp E-------EEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCC----------
T ss_pred E-------EEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcE----------
Confidence 1 111 1111 1234667899999998887 432 13455554432210
Q ss_pred cCCCccccccccccccccccCCccceEEEEe-CCCCeEEEEecC------CcEEEEECCCCceeee--eee---CeeeEE
Q 036314 164 KGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWD------HSVRTWDVEMGKDLSD--IFC---GKALNC 231 (347)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~d------g~v~vwd~~~~~~~~~--~~~---~~~~~~ 231 (347)
..+. .......++| ++++.|+.+... +.|.+||+..+. +.. ... ......
T Consensus 182 ----------------~~~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~pdg 243 (305)
T 3dr2_A 182 ----------------QRMA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASVPDGLPDG 243 (305)
T ss_dssp ----------------EEEE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECCSSSCCCS
T ss_pred ----------------EEEe-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEECCCCCCCe
Confidence 0111 1223456777 566767766554 689999987543 211 110 112234
Q ss_pred EEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCc
Q 036314 232 IDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGK 296 (347)
Q Consensus 232 ~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~ 296 (347)
+.+.+++ ++.+ +..+ .|.+||... . ....+..+. .+.+++|+|++.. |..++.++.
T Consensus 244 i~~d~~G-~lwv-~~~~-gv~~~~~~g--~--~~~~~~~~~-~~~~~~f~~d~~~-L~it~~~~l 299 (305)
T 3dr2_A 244 FCVDRGG-WLWS-SSGT-GVCVFDSDG--Q--LLGHIPTPG-TASNCTFDQAQQR-LFITGGPCL 299 (305)
T ss_dssp EEECTTS-CEEE-CCSS-EEEEECTTS--C--EEEEEECSS-CCCEEEECTTSCE-EEEEETTEE
T ss_pred EEECCCC-CEEE-ecCC-cEEEECCCC--C--EEEEEECCC-ceeEEEEeCCCCE-EEEEcCCeE
Confidence 5665544 4444 3344 599999742 2 234444444 5888999988765 555555543
No 218
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.85 E-value=8.4e-06 Score=71.40 Aligned_cols=215 Identities=10% Similarity=0.024 Sum_probs=125.1
Q ss_pred CCEEEEEecCCeEEEEcCCCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeee
Q 036314 35 PGFILTGCYDNLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKI 114 (347)
Q Consensus 35 ~~~l~sg~~d~~i~iw~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~ 114 (347)
+.++++...++.|..|+..+.....+. ....+.++.+.+++ ..+++ +.+ .|.+||..+++.. .+..
T Consensus 61 ~~l~~~d~~~~~i~~~d~~~~~~~~~~-~~~~v~~i~~~~dg----~l~v~-~~~-gl~~~d~~~g~~~-------~~~~ 126 (326)
T 2ghs_A 61 GTAWWFNILERELHELHLASGRKTVHA-LPFMGSALAKISDS----KQLIA-SDD-GLFLRDTATGVLT-------LHAE 126 (326)
T ss_dssp TEEEEEEGGGTEEEEEETTTTEEEEEE-CSSCEEEEEEEETT----EEEEE-ETT-EEEEEETTTCCEE-------EEEC
T ss_pred CEEEEEECCCCEEEEEECCCCcEEEEE-CCCcceEEEEeCCC----eEEEE-ECC-CEEEEECCCCcEE-------EEee
Confidence 346777777899999998654433333 34678999998853 33443 344 4999998765421 1111
Q ss_pred ee-c-cccceEEEEEeCCCCEEEEeeCC----CcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccc
Q 036314 115 LR-G-HKASVHSIAAETSGNMVCSGSWD----CTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQC 188 (347)
Q Consensus 115 ~~-~-h~~~V~~v~~s~~~~~l~sgs~D----g~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 188 (347)
.. + ....+++++++++|+++++...+ ....||.+.++. ...+..+...
T Consensus 127 ~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~~g~--------------------------~~~~~~~~~~ 180 (326)
T 2ghs_A 127 LESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGK--------------------------VTKLFADISI 180 (326)
T ss_dssp SSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTE--------------------------EEEEEEEESS
T ss_pred CCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEeCCc--------------------------EEEeeCCCcc
Confidence 11 1 12457899999999977755422 234555443210 0001111123
Q ss_pred eEEEEeC-CCCeEE-EEecCCcEEEEECC--CC-cee--eeee----eCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCC
Q 036314 189 VSSVVWP-QQETIY-SASWDHSVRTWDVE--MG-KDL--SDIF----CGKALNCIDIGGEGSALIAAGGSDPILRIWDPR 257 (347)
Q Consensus 189 v~~~~~~-~~~~l~-s~s~dg~v~vwd~~--~~-~~~--~~~~----~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~ 257 (347)
...++|. +++.++ +.+.++.|.+||+. ++ ... ..+. .......+.+.+++ .+.++...++.|..||..
T Consensus 181 ~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G-~lwva~~~~~~v~~~d~~ 259 (326)
T 2ghs_A 181 PNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEG-HIWNARWGEGAVDRYDTD 259 (326)
T ss_dssp EEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTS-CEEEEEETTTEEEEECTT
T ss_pred cCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCC-CEEEEEeCCCEEEEECCC
Confidence 4567774 666664 44557889999985 55 311 1111 11234567776554 565555556889999974
Q ss_pred CCCCCCCeEEecCCCCCeeEEEeC-CCCCeEEEEEeCC
Q 036314 258 KPGTSAPVFQFSSHNSWISACKWH-NKSWFHLISASYD 294 (347)
Q Consensus 258 ~~~~~~~~~~~~~h~~~v~~v~~s-~~~~~~l~s~s~D 294 (347)
. . ....+..+...+.+++|. |++..++++...+
T Consensus 260 -g-~--~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 260 -G-N--HIARYEVPGKQTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp -C-C--EEEEEECSCSBEEEEEEESTTSCEEEEEEBCT
T ss_pred -C-C--EEEEEECCCCCcEEEEEecCCCCEEEEEecCC
Confidence 2 2 244555666679999998 7876655555544
No 219
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.84 E-value=1.9e-07 Score=83.09 Aligned_cols=265 Identities=11% Similarity=-0.097 Sum_probs=148.4
Q ss_pred CEEEEEecCC----eEEEEcCC-CeEEEEeeccCCceEEEEEeecCCCceEEEEEcc----------CCCcEEEEecccc
Q 036314 36 GFILTGCYDN----LGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATAS----------KDQTLRLWKFDAE 100 (347)
Q Consensus 36 ~~l~sg~~d~----~i~iw~~~-~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s----------~Dg~v~~wd~~~~ 100 (347)
...++...++ ++.+.|.. ++.+..+.--..+ .+.++|++. .++.+. .+++|.+||+.+.
T Consensus 33 ~~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~----~lyVan~~~~r~~~G~~~~~VsviD~~T~ 106 (368)
T 1mda_H 33 RSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGS----DFALASTSFARSAKGKRTDYVEVFDPVTF 106 (368)
T ss_dssp EEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSS----CEEEEEEEETTTTSSSEEEEEEEECTTTC
T ss_pred eEEEECCccCCccceEEEEECCCCeEEEEEeCCCCC--ceEECCCCC----EEEEEcccccccccCCCCCEEEEEECCCC
Confidence 3555655555 78899975 5666666533344 799999654 244443 4789999999876
Q ss_pred ccccCccccceeeeeecc-------ccceEEEEEeCCCCEEEEeeC--CCcEEE--EecCCCCCC---C-ccceeee---
Q 036314 101 ELVNHPKKIRSFKILRGH-------KASVHSIAAETSGNMVCSGSW--DCTISL--WRTNDSDAA---G-NQVSIKK--- 162 (347)
Q Consensus 101 ~~~~~~~~~~~~~~~~~h-------~~~V~~v~~s~~~~~l~sgs~--Dg~I~i--wd~~~~~~~---~-~~~~~~~--- 162 (347)
+.. .++.-+ ......++|+|||++++.+.. +..+.+ +|+.+.... + .......
T Consensus 107 ~vv---------~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~tv~~i~v~~~~~~~p~g~~~ 177 (368)
T 1mda_H 107 LPI---------ADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAAT 177 (368)
T ss_dssp CEE---------EEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECSSCCCCEEEETTE
T ss_pred CEE---------EEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhhceEEECCCceEEccCCCeE
Confidence 532 233211 022456899999999998875 467888 887540000 0 0000000
Q ss_pred ----ccCCCccccccc-----ccccc----ccccCCccceEEEEeCCCCeEEEEecCCcEEEEECCCCc--eeeeeee--
Q 036314 163 ----RKGNNQVEEPQL-----EGEAI----STLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGK--DLSDIFC-- 225 (347)
Q Consensus 163 ----~~~~~~~~~~~~-----~~~~~----~~~~~h~~~v~~~~~~~~~~l~s~s~dg~v~vwd~~~~~--~~~~~~~-- 225 (347)
............ .++.. ..+.-...+. .++++..++..+. +.+.+.|+.... .+..+..
T Consensus 178 ~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~ 253 (368)
T 1mda_H 178 HYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA---QANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNE 253 (368)
T ss_dssp EECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---EETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSC
T ss_pred EEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc---ccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEecc
Confidence 000000000000 01100 0010111222 2566666666666 899999986532 2222211
Q ss_pred ------C---eeeEEEEeeCCCCcEEEEec---C-----CCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEE
Q 036314 226 ------G---KALNCIDIGGEGSALIAAGG---S-----DPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHL 288 (347)
Q Consensus 226 ------~---~~~~~~~~~~~~~~~la~~~---~-----d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l 288 (347)
. .....+.+++++..++++.. . ++.+.++|+.... .+..+.... ....++|+||+.+++
T Consensus 254 ~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~---vv~~i~vg~-~p~gi~~s~Dg~~l~ 329 (368)
T 1mda_H 254 SGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQ---TSGPISNGH-DSDAIIAAQDGASDN 329 (368)
T ss_dssp THHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCC---EEECCEEEE-EECEEEECCSSSCEE
T ss_pred ccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCe---EEEEEECCC-CcceEEECCCCCEEE
Confidence 0 11122567777766665433 2 2456699987532 233333222 577899999998778
Q ss_pred EEEe-CCCcEEEEEcCCCccceeecCCCCeEEEEeec
Q 036314 289 ISAS-YDGKVMLWDLRTAWPLSVIDSHKDKVLCADWW 324 (347)
Q Consensus 289 ~s~s-~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~ 324 (347)
++.. .+++|.++|+.+++.++++.... ..+++++.
T Consensus 330 va~~~~~~~VsVID~~t~kvv~~I~vg~-~P~~i~~~ 365 (368)
T 1mda_H 330 YANSAGTEVLDIYDAASDQDQSSVELDK-GPESLSVQ 365 (368)
T ss_dssp EEEETTTTEEEEEESSSCEEEEECCCCS-CCCEEECC
T ss_pred EEccCCCCeEEEEECCCCcEEEEEECCC-CCCEEEee
Confidence 8888 69999999999999888886543 34556554
No 220
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.83 E-value=4e-09 Score=94.50 Aligned_cols=181 Identities=11% Similarity=0.021 Sum_probs=95.4
Q ss_pred CCCEEEEEecCCeEEEEcC-CCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCcccccee
Q 036314 34 NPGFILTGCYDNLGRVWKA-GGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSF 112 (347)
Q Consensus 34 ~~~~l~sg~~d~~i~iw~~-~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~ 112 (347)
+++.+++++.|+.++.||. .|+.+..+.. +.+.+..+..++ ..+++++.|+.|+.||..+++.+-
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g----~~~v~~s~dg~l~a~d~~tG~~~w-------- 73 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEE----PAFLPDPNDGSLYTLGSKNNEGLT-------- 73 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC---------CCEEECTTTCCEEEC-----CCSE--------
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCC----CEEEEeCCCCEEEEEECCCCceee--------
Confidence 5678999999999999996 5777777665 445444344322 346778999999999997765321
Q ss_pred eeeecccc-ceEE-EEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceE
Q 036314 113 KILRGHKA-SVHS-IAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVS 190 (347)
Q Consensus 113 ~~~~~h~~-~V~~-v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 190 (347)
.+..+.. .+.+ ..+. ++..+++++.|+.++.||..+++.. ..+..+. .+.
T Consensus 74 -~~~~~~~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~-------------------------w~~~~~~-~~~ 125 (369)
T 2hz6_A 74 -KLPFTIPELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQ-------------------------QTLSSAF-ADS 125 (369)
T ss_dssp -ECSCCHHHHHTTCSCC------CCCCEEEEEEEEECCC-----------------------------------------
T ss_pred -eeeccCccccccCceEe-cCCEEEEEeCCCEEEEEECCCCcEE-------------------------EEecCCC-ccc
Confidence 1111110 0100 0111 3456778899999999998865321 1111111 010
Q ss_pred EEEeCCCCeEEEEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCC--CcEEEEecCCCcEEEEeCCCC
Q 036314 191 SVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEG--SALIAAGGSDPILRIWDPRKP 259 (347)
Q Consensus 191 ~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~la~~~~d~~i~iwd~~~~ 259 (347)
..|.++.+++++.|+.|..||.++++.+-.+.... .....+..+. ...+++++.|+.++.||.+..
T Consensus 126 --~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~-~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG 193 (369)
T 2hz6_A 126 --LSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD-YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESG 193 (369)
T ss_dssp ---------EEEEEEEEEEECCCSSSSSCCCEEEEEE-ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTC
T ss_pred --ccccCCEEEEEecCCEEEEEECCCCCEEEeEeccc-ccCccccCCccccceEEEECCCCEEEEEECCCC
Confidence 11466788899999999999999987654433211 1112222211 024556778999999998753
No 221
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.80 E-value=4.4e-07 Score=82.20 Aligned_cols=223 Identities=10% Similarity=0.018 Sum_probs=123.9
Q ss_pred CcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEee----------CCCcEEEEecCCCCCCCccce
Q 036314 90 QTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGS----------WDCTISLWRTNDSDAAGNQVS 159 (347)
Q Consensus 90 g~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs----------~Dg~I~iwd~~~~~~~~~~~~ 159 (347)
++|.+.|..+.+. +.++.--..+ .++++|||++++.+. .+++|.++|..+........
T Consensus 99 ~~VsVID~~t~~v---------v~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~- 166 (426)
T 3c75_H 99 TQQFVIDGSTGRI---------LGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIE- 166 (426)
T ss_dssp EEEEEEETTTTEE---------EEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEE-
T ss_pred CeEEEEECCCCEE---------EEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEE-
Confidence 7999999887653 3333332345 799999999888775 47789999987653211100
Q ss_pred eeeccCCCccccccccccccccccCCccceEEEEe-CCCCeEEEEec--CCcEEEEECCCCceeeeeeeCeeeEEEEeeC
Q 036314 160 IKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASW--DHSVRTWDVEMGKDLSDIFCGKALNCIDIGG 236 (347)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~--dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~ 236 (347)
..... +...+ ..-..+.+ +++++++.+.. +++|.+.|+.+.+.+..+..... ..+.+
T Consensus 167 ---v~g~~------------r~~~g--~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~---~~~~p 226 (426)
T 3c75_H 167 ---LPDAP------------RFLVG--TYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC---YHIFP 226 (426)
T ss_dssp ---ETTCC------------CCCBS--CCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE---EEEEE
T ss_pred ---CCCcc------------ccccC--CCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc---eeecc
Confidence 00000 00000 00112333 68888887764 57899999999988777654321 11111
Q ss_pred CCCcEEEEecCCCcEEEEeCCCCC-------------CC-----------CC---------eEEec--CC----------
Q 036314 237 EGSALIAAGGSDPILRIWDPRKPG-------------TS-----------AP---------VFQFS--SH---------- 271 (347)
Q Consensus 237 ~~~~~la~~~~d~~i~iwd~~~~~-------------~~-----------~~---------~~~~~--~h---------- 271 (347)
.+...+++.+.||++.+.+..... .+ .. +..+. +.
T Consensus 227 ~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~ 306 (426)
T 3c75_H 227 ASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEA 306 (426)
T ss_dssp EETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEES
T ss_pred CCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeee
Confidence 111222222233333333321000 00 00 00000 00
Q ss_pred -----------CCCeeEEEeCCCCCeEEEEEeC---------CCcEEEEEcCCCccceeecCCCCeEEEEeecC-CC-EE
Q 036314 272 -----------NSWISACKWHNKSWFHLISASY---------DGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GD-SV 329 (347)
Q Consensus 272 -----------~~~v~~v~~s~~~~~~l~s~s~---------D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~-~~-~l 329 (347)
......++++|++.+++++... +++|.++|..+.+.+.++... ...+++.|++ |+ ++
T Consensus 307 ~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg-~~P~gia~spDg~~~l 385 (426)
T 3c75_H 307 LTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELG-HEIDSINVSQDAEPLL 385 (426)
T ss_dssp SCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECCSSSCEE
T ss_pred ccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECC-CCcCeEEEccCCCEEE
Confidence 0011126788888765555431 357999999999888887532 2578899975 66 66
Q ss_pred EEcc-CCceEEEeeccc
Q 036314 330 ISGG-VDSKLCVSSGVS 345 (347)
Q Consensus 330 ~s~s-~D~~v~vw~~~~ 345 (347)
.++. .+++|.|++..+
T Consensus 386 yv~n~~s~~VsVID~~t 402 (426)
T 3c75_H 386 YALSAGTQTLHIYDAAT 402 (426)
T ss_dssp EEEETTTTEEEEEETTT
T ss_pred EEEcCCCCeEEEEECCC
Confidence 6666 599999998753
No 222
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.76 E-value=2.3e-07 Score=81.03 Aligned_cols=139 Identities=15% Similarity=0.126 Sum_probs=80.9
Q ss_pred EEeCCCCeEEEEecCCcEEEEECCCCceeeeeeeC-eeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecC
Q 036314 192 VVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCG-KALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSS 270 (347)
Q Consensus 192 ~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~ 270 (347)
+....+..++.++ +.|..+| .+++........ ..+.++...++ +. +..++.++.+..+|... .....+..
T Consensus 182 ~~~d~~g~l~v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~-g~-l~v~t~~~gl~~~~~~g----~~~~~~~~ 252 (330)
T 3hxj_A 182 ASIGKDGTIYFGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISED-GT-IYVTSLDGHLYAINPDG----TEKWRFKT 252 (330)
T ss_dssp CEECTTCCEEEES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTT-SC-EEEEETTTEEEEECTTS----CEEEEEEC
T ss_pred eEEcCCCEEEEEe--CEEEEEC-CCCcEEEEEccCCcceeceEECCC-Ce-EEEEcCCCeEEEECCCC----CEeEEeeC
Confidence 3443334455555 7899999 666654433322 23445555443 33 44566678888887431 12334443
Q ss_pred CCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeecCCCEEEEccCCceEEEee
Q 036314 271 HNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGGVDSKLCVSS 342 (347)
Q Consensus 271 h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~D~~v~vw~ 342 (347)
....+.++...+++ .|..++.++.+..+|. +++....+......+.++...++..|..++.+|.+++-.
T Consensus 253 ~~~~~~~~~~~~~g--~l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~l~~gt~~G~~~~~~ 321 (330)
T 3hxj_A 253 GKRIESSPVIGNTD--TIYFGSYDGHLYAINP-DGTEKWNFETGSWIIATPVIDENGTIYFGTRNGKFYALF 321 (330)
T ss_dssp SSCCCSCCEECTTS--CEEEECTTCEEEEECT-TSCEEEEEECSSCCCSCCEECTTCCEEEECTTSCEEEEE
T ss_pred CCCccccceEcCCC--eEEEecCCCCEEEECC-CCcEEEEEEcCCccccceEEcCCCEEEEEcCCCeEEEEe
Confidence 44444555666555 3777888889999996 566555554334445555553444566678899888754
No 223
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.75 E-value=1.3e-05 Score=71.55 Aligned_cols=260 Identities=9% Similarity=-0.001 Sum_probs=142.7
Q ss_pred CCEEEEEecCCeEEEEcC-CCeEEEEeecc---------CCceEEEEEeecCCCceEEEEEccCCCcEEEEecccccccc
Q 036314 35 PGFILTGCYDNLGRVWKA-GGVCTHILEGH---------CGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVN 104 (347)
Q Consensus 35 ~~~l~sg~~d~~i~iw~~-~~~~~~~l~~h---------~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~ 104 (347)
++.+..++.++.+..+|. .|+.+..+... ...+.+.-... ++ .|+.++.++.|..+|..+++..-
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~v~v~~~~g~l~a~d~~tG~~~W 127 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVS-GG----HVYIGSEKAQVYALNTSDGTVAW 127 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEE-TT----EEEEEETTSEEEEEETTTCCEEE
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEe-CC----EEEEEcCCCEEEEEECCCCCEEE
Confidence 567888888999999997 47766554432 12222211112 22 46778889999999998775321
Q ss_pred CccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccC
Q 036314 105 HPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVG 184 (347)
Q Consensus 105 ~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (347)
............... +..++.++.++.+..+|..++...... ... .....+..
T Consensus 128 ---------~~~~~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~------~~~----------~~~~~~~~ 180 (376)
T 3q7m_A 128 ---------QTKVAGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTV------NLD----------MPSLSLRG 180 (376)
T ss_dssp ---------EEECSSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEE------ECC----------C-----CC
T ss_pred ---------EEeCCCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEE------eCC----------CCceeecC
Confidence 111111101111112 446777888999999998765321100 000 00000011
Q ss_pred CccceEEEEeCCCCeEEEEecCCcEEEEECCCCceeeeeeeCee-----------e-EEEEeeCCCCcEEEEecCCCcEE
Q 036314 185 HTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKA-----------L-NCIDIGGEGSALIAAGGSDPILR 252 (347)
Q Consensus 185 h~~~v~~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~-----------~-~~~~~~~~~~~~la~~~~d~~i~ 252 (347)
...++. .+..++.++.++.+..+|.++++.+-......+ + ....+ .+ ..+..++.++.+.
T Consensus 181 ~~~~~~-----~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~--~~-~~v~~~~~~g~l~ 252 (376)
T 3q7m_A 181 ESAPTT-----AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVV--VN-GVVFALAYNGNLT 252 (376)
T ss_dssp CCCCEE-----ETTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEE--ET-TEEEEECTTSCEE
T ss_pred CCCcEE-----ECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEE--EC-CEEEEEecCcEEE
Confidence 111111 245677888899999999998876544332211 0 00011 12 3456677889999
Q ss_pred EEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCC-CeEEEEeecCCCEEEE
Q 036314 253 IWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHK-DKVLCADWWRGDSVIS 331 (347)
Q Consensus 253 iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~-~~v~~~~~~~~~~l~s 331 (347)
.+|++... .+.... ......+... +. .|..++.++.+..+|.++++.+-...... ..+..... .+..|..
T Consensus 253 ~~d~~tG~---~~w~~~--~~~~~~~~~~--~~-~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~-~~~~l~v 323 (376)
T 3q7m_A 253 ALDLRSGQ---IMWKRE--LGSVNDFIVD--GN-RIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL-YNGNLVV 323 (376)
T ss_dssp EEETTTCC---EEEEEC--CCCEEEEEEE--TT-EEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE-ETTEEEE
T ss_pred EEECCCCc---EEeecc--CCCCCCceEE--CC-EEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE-ECCEEEE
Confidence 99986432 222222 2233444443 33 47778889999999999987654443111 11122222 2456777
Q ss_pred ccCCceEEEeec
Q 036314 332 GGVDSKLCVSSG 343 (347)
Q Consensus 332 ~s~D~~v~vw~~ 343 (347)
++.+|.|.+++.
T Consensus 324 ~~~~g~l~~~d~ 335 (376)
T 3q7m_A 324 GDSEGYLHWINV 335 (376)
T ss_dssp ECTTSEEEEEET
T ss_pred EeCCCeEEEEEC
Confidence 777888887763
No 224
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.74 E-value=2.6e-05 Score=69.69 Aligned_cols=240 Identities=8% Similarity=-0.092 Sum_probs=135.4
Q ss_pred eccCC-CCCEEEEEe----------cCCeEEEEcCC-CeEEEEeecc-------CCceEEEEEeecCCCceEEEEEccC-
Q 036314 29 AVDGS-NPGFILTGC----------YDNLGRVWKAG-GVCTHILEGH-------CGAVSSVNIIKSDGLKYVTVATASK- 88 (347)
Q Consensus 29 ~~~~~-~~~~l~sg~----------~d~~i~iw~~~-~~~~~~l~~h-------~~~V~~v~~~~~~~~~~~~l~s~s~- 88 (347)
.+.++ ++++|..+. .++.|.+||.. .+.+..+.-- ...-..++|+|++. +|+.++.
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~----~l~v~n~~ 145 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNA----DLLFFQFA 145 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCC----EEEEEecC
Confidence 67777 455666554 36789999974 3444333211 12234788888543 5665553
Q ss_pred -CCcEEEEeccccccccCccccceeee-eeccccceEEEEEeCCC-CEEEEeeCCCcEEEEecCCCCCCCccceeeeccC
Q 036314 89 -DQTLRLWKFDAEELVNHPKKIRSFKI-LRGHKASVHSIAAETSG-NMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKG 165 (347)
Q Consensus 89 -Dg~v~~wd~~~~~~~~~~~~~~~~~~-~~~h~~~V~~v~~s~~~-~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~ 165 (347)
+++|.++| .+++.. .. +.- .. ++.+.+++ +.+++.+.||++.+++. ++..... ...
T Consensus 146 ~~~~v~viD-~t~~~~---------~~~i~~-~~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~----~~~-- 204 (373)
T 2mad_H 146 AGPAVGLVV-QGGSSD---------DQLLSS-PT---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGA----GLV-- 204 (373)
T ss_pred CCCeEEEEE-CCCCEE---------eEEcCC-Cc---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEE----Eec--
Confidence 57899999 876532 22 211 11 23445555 46667788999999988 5422100 000
Q ss_pred CCccccccccccccccccCCccce-EEEEe-CCCCeEEEEecCCcEEEEECCCCce--eeeeee-----------CeeeE
Q 036314 166 NNQVEEPQLEGEAISTLVGHTQCV-SSVVW-PQQETIYSASWDHSVRTWDVEMGKD--LSDIFC-----------GKALN 230 (347)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~h~~~v-~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~--~~~~~~-----------~~~~~ 230 (347)
.. .+.+ ..++ ....+ +++..++..+..+.+.+.|+..... +..+.. .....
T Consensus 205 -----------~~--~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~ 270 (373)
T 2mad_H 205 -----------GA--MLTA-AQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQ 270 (373)
T ss_pred -----------cc--cccC-CcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceE
Confidence 00 0000 0111 11111 3344444445778888899865421 122210 11123
Q ss_pred EEEeeCCCCcEEEEec---------CCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEe-CCCcEEEE
Q 036314 231 CIDIGGEGSALIAAGG---------SDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISAS-YDGKVMLW 300 (347)
Q Consensus 231 ~~~~~~~~~~~la~~~---------~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s-~D~~i~lw 300 (347)
.+.+++++..++++.. .++.|.++|+... +.+.++.. ......++|+||+.++|+++. .++.|.++
T Consensus 271 ~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~---~vv~~i~~-g~~p~~i~~s~Dg~~~l~v~~~~~~~V~Vi 346 (373)
T 2mad_H 271 QVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVG---QTSSQISL-GHDVDAISVAQDGGPDLYALSAGTEVLHIY 346 (373)
T ss_pred eEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCC---EEEEEEEC-CCCcCeEEECCCCCeEEEEEcCCCCeEEEE
Confidence 3566666665555432 2468999998643 22345532 235788999999985677777 58999999
Q ss_pred EcCCCccceee
Q 036314 301 DLRTAWPLSVI 311 (347)
Q Consensus 301 d~~~~~~~~~~ 311 (347)
|.++++.+.++
T Consensus 347 D~~t~~vv~~i 357 (373)
T 2mad_H 347 DAGAGDQDQST 357 (373)
T ss_pred ECCCCCEEeee
Confidence 99999888773
No 225
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.73 E-value=7.7e-07 Score=79.18 Aligned_cols=67 Identities=7% Similarity=-0.144 Sum_probs=49.3
Q ss_pred EEeCCCCCeEEEEEe---C-----CCcEEEEEcCCCccceeecCCCCeEEEEeecC-CC-EEEEcc-CCceEEEeeccc
Q 036314 278 CKWHNKSWFHLISAS---Y-----DGKVMLWDLRTAWPLSVIDSHKDKVLCADWWR-GD-SVISGG-VDSKLCVSSGVS 345 (347)
Q Consensus 278 v~~s~~~~~~l~s~s---~-----D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~-~~-~l~s~s-~D~~v~vw~~~~ 345 (347)
++++|++.+++++.. . ++.+.++|+.+++.+.++.... ...++.|++ |+ .+++.. .+++|.|++..+
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t 346 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAAS 346 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSS
T ss_pred eEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCC
Confidence 679999887665544 2 2356699999998888775433 678899985 55 467777 599999999753
No 226
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.71 E-value=5.2e-07 Score=78.78 Aligned_cols=254 Identities=13% Similarity=0.061 Sum_probs=137.9
Q ss_pred CCCCCEEEEEecCCeEEEEcCCCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccce
Q 036314 32 GSNPGFILTGCYDNLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRS 111 (347)
Q Consensus 32 ~~~~~~l~sg~~d~~i~iw~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~ 111 (347)
...++.|..++.++.+..||..+.....+..+...+.++.+.+++ .|..++.+ |..+|. +++..-.
T Consensus 27 ~d~~g~l~v~t~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~~g-----~l~v~t~~--l~~~d~-~g~~~~~------ 92 (330)
T 3hxj_A 27 LAKNGTIYLGSSNKNLYAINTDGSVKWFFKSGEIIECRPSIGKDG-----TIYFGSDK--VYAINP-DGTEKWR------ 92 (330)
T ss_dssp ECTTSCEECSSTTTTTEEECTTSCEEESSCGGGEEEECCEETTTT-----EECCSSCE--EEEECC-CGGGGGG------
T ss_pred EccCCeEEEEcCCCEEEEECCCCcEEEEEecCCCcccceEEecCC-----cEEEecCc--EEEECC-CCcEEEE------
Confidence 334556777778888999996576655555444444555543322 35556655 888886 3332110
Q ss_pred eeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEE
Q 036314 112 FKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSS 191 (347)
Q Consensus 112 ~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 191 (347)
+..+........+. +..++.++.++.+..+|.. +... .....+...+.+
T Consensus 93 ---~~~~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~-------------------------~~~~~~~~~~~~ 141 (330)
T 3hxj_A 93 ---FDTKKAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEK-------------------------WRFKTKKAIYAT 141 (330)
T ss_dssp ---SCC-----CCEEEE--TTEEEEECTTSEEEEECTT-SCEE-------------------------EEEECSSCCCSC
T ss_pred ---EECCCCcccCceEE--CCEEEEEecCCEEEEEcCC-CCEE-------------------------EEEcCCCceeee
Confidence 11111111122233 4456668888999999865 3210 000111112222
Q ss_pred EEeCCCCeEEEEecCCcEEEEECCCCceeeeeeeC-eeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecC
Q 036314 192 VVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCG-KALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSS 270 (347)
Q Consensus 192 ~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~ 270 (347)
+....+..++.++.++.|..+|.. ++........ ..+.++.... ++.+.+ ++ +.+..+| ... .....+..
T Consensus 142 ~~~~~~g~l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~-~g~l~v-~t--~~l~~~d-~~g---~~~~~~~~ 212 (330)
T 3hxj_A 142 PIVSEDGTIYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGK-DGTIYF-GS--DKVYAIN-PDG---TEKWNFYA 212 (330)
T ss_dssp CEECTTSCEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECT-TCCEEE-ES--SSEEEEC-TTS---CEEEEECC
T ss_pred eEEcCCCEEEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcC-CCEEEE-Ee--CEEEEEC-CCC---cEEEEEcc
Confidence 333334557777888999999988 6655444322 2333444433 334443 44 7899998 322 22344444
Q ss_pred CCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEeecCCCEEEEccCCceEEEee
Q 036314 271 HNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADWWRGDSVISGGVDSKLCVSS 342 (347)
Q Consensus 271 h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~D~~v~vw~ 342 (347)
....+.++...+++. |..++.++.+..+|. +++.+..+......+.++...++..|..++.++.|..++
T Consensus 213 ~~~~~~~~~~~~~g~--l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~ggl~~~d 281 (330)
T 3hxj_A 213 GYWTVTRPAISEDGT--IYVTSLDGHLYAINP-DGTEKWRFKTGKRIESSPVIGNTDTIYFGSYDGHLYAIN 281 (330)
T ss_dssp SSCCCSCCEECTTSC--EEEEETTTEEEEECT-TSCEEEEEECSSCCCSCCEECTTSCEEEECTTCEEEEEC
T ss_pred CCcceeceEECCCCe--EEEEcCCCeEEEECC-CCCEeEEeeCCCCccccceEcCCCeEEEecCCCCEEEEC
Confidence 455677888888763 666777888888875 444444443333323333444344566667776776665
No 227
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.71 E-value=1.5e-06 Score=76.85 Aligned_cols=245 Identities=8% Similarity=-0.017 Sum_probs=133.9
Q ss_pred CceEEEEEeecCCCceEEEEEcc--CCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeC---
Q 036314 65 GAVSSVNIIKSDGLKYVTVATAS--KDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSW--- 139 (347)
Q Consensus 65 ~~V~~v~~~~~~~~~~~~l~s~s--~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~--- 139 (347)
..+..|++++++ +.+++.. .++.++||.+..+++...+. .. ....+|...+..++++++++++++...
T Consensus 17 ~~p~~va~~~~g----~~~v~~~~~~~~~~~l~~~~~g~~~~~p~-~~--~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~ 89 (343)
T 2qe8_A 17 LAPGNITLTPDG----RLFLSLHQFYQPEMQVAELTQDGLIPFPP-QS--GNAIITFDTVLGIKSDGNGIVWMLDNGNQS 89 (343)
T ss_dssp SCEEEEEECTTS----CEEEEECGGGCCSCSEEEEETTEEEESCC-CC--SSCCCCCSCEEEEEECSSSEEEEEECHHHH
T ss_pred CCcceEEECCCC----CEEEEeCCCCCCceEEEEECCCCeecCCC-cc--cCcccceeEeeEEEEcCCCcEEEEcCCCCc
Confidence 567889998743 3456642 33446777765444321111 00 112246678999999999987765543
Q ss_pred --CCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeC-CCCeE-EEEe---cCCcEEEE
Q 036314 140 --DCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP-QQETI-YSAS---WDHSVRTW 212 (347)
Q Consensus 140 --Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~l-~s~s---~dg~v~vw 212 (347)
+..|.+||+.++.... ..... .....+......+++. ++..+ ++-. .++.|.+|
T Consensus 90 ~~~~~i~~~d~~tg~~~~----~~~~~---------------~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~ 150 (343)
T 2qe8_A 90 KSVPKLVAWDTLNNQLSR----VIYLP---------------PPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRV 150 (343)
T ss_dssp TSCCEEEEEETTTTEEEE----EEECC---------------TTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEE
T ss_pred CCCCeEEEEECCCCeEEE----EEECC---------------hhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEE
Confidence 6789999987542100 00000 0001122334566664 44454 4444 67899999
Q ss_pred ECCCCceeeeeee--------------C----------------eeeEEEEeeCCCCcEEEEecCCCcEEEEeCCC--CC
Q 036314 213 DVEMGKDLSDIFC--------------G----------------KALNCIDIGGEGSALIAAGGSDPILRIWDPRK--PG 260 (347)
Q Consensus 213 d~~~~~~~~~~~~--------------~----------------~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~--~~ 260 (347)
|+.+++....+.. + .....+++++++..++++......+..++... ..
T Consensus 151 d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~ 230 (343)
T 2qe8_A 151 DLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNL 230 (343)
T ss_dssp ETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCT
T ss_pred ECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCC
Confidence 9987654432211 0 12456788776544444444444565555321 00
Q ss_pred CCC-----CeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecC-CCCeEEEEeec-CCCEEEEcc
Q 036314 261 TSA-----PVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDS-HKDKVLCADWW-RGDSVISGG 333 (347)
Q Consensus 261 ~~~-----~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~-h~~~v~~~~~~-~~~~l~s~s 333 (347)
... ......++......+++++++ .++++...++.|.+||.++++....... +-..+.+++|. +|..+++.+
T Consensus 231 ~~~~~~~~~~~~~~g~~g~pdgia~d~~G-~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~ 309 (343)
T 2qe8_A 231 QLTDAELGSKIERYSEKPICDGISIDKDH-NIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCN 309 (343)
T ss_dssp TCCHHHHHTTCEEEEECCSCSCEEECTTC-CEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEEC
T ss_pred CCChhhhhcceEecccCCCCceEEECCCC-CEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeC
Confidence 000 001122333455678899987 4677778889999999955543222221 23457889996 466666655
Q ss_pred CCc
Q 036314 334 VDS 336 (347)
Q Consensus 334 ~D~ 336 (347)
..+
T Consensus 310 ~~~ 312 (343)
T 2qe8_A 310 QLH 312 (343)
T ss_dssp CGG
T ss_pred ccc
Confidence 443
No 228
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.68 E-value=6.2e-06 Score=74.30 Aligned_cols=192 Identities=11% Similarity=0.158 Sum_probs=116.1
Q ss_pred EEEEEccCCCcEEEEeccccccccCccccceeeeee------cc-ccceEEEEEeCCCCEEEEeeCC------CcEEEEe
Q 036314 81 VTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILR------GH-KASVHSIAAETSGNMVCSGSWD------CTISLWR 147 (347)
Q Consensus 81 ~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~------~h-~~~V~~v~~s~~~~~l~sgs~D------g~I~iwd 147 (347)
..++++-.+++|.++|+.+. +.+++..+++. .+ ...-+.+...|+| +++++..+ +.|.+.|
T Consensus 97 ~l~v~~l~s~~I~viD~~t~-----p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD 170 (462)
T 2ece_A 97 FLIVPGLRSSRIYIIDTKPN-----PREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLD 170 (462)
T ss_dssp EEEEEBTTTCCEEEEECCSC-----TTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEEC
T ss_pred EEEEccCCCCeEEEEECCCC-----CCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEE
Confidence 56788889999999998643 12223333342 01 1234567778999 77776555 7899998
Q ss_pred cCCCCCCCccceeeeccCCCcccccccccccccccc---CCccceEEEEe-CCCCeEEEEe-------------------
Q 036314 148 TNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLV---GHTQCVSSVVW-PQQETIYSAS------------------- 204 (347)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~h~~~v~~~~~-~~~~~l~s~s------------------- 204 (347)
.++.+..+ .+. +....-..+-| |+++.+++..
T Consensus 171 ~~T~~v~~-------------------------~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~ 225 (462)
T 2ece_A 171 HYSFEPLG-------------------------KWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDR 225 (462)
T ss_dssp TTTCCEEE-------------------------ECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHH
T ss_pred CCCCeEEE-------------------------EEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhc
Confidence 87643211 111 00011122333 5677777764
Q ss_pred cCCcEEEEECCCCceeeeeeeC---eeeEEEEe--eCCCCcEEEEec-----CCCcEEEEeCCCCCCCCCeEEe--cC--
Q 036314 205 WDHSVRTWDVEMGKDLSDIFCG---KALNCIDI--GGEGSALIAAGG-----SDPILRIWDPRKPGTSAPVFQF--SS-- 270 (347)
Q Consensus 205 ~dg~v~vwd~~~~~~~~~~~~~---~~~~~~~~--~~~~~~~la~~~-----~d~~i~iwd~~~~~~~~~~~~~--~~-- 270 (347)
.+.+|.+||+.+++.+.++..+ .....+.| ++++...++++- .+++|.+|.... +.......+ ..
T Consensus 226 ~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~-g~~~~~~vIdi~~~~ 304 (462)
T 2ece_A 226 YGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYED-GKWNAEKVIEIPAEP 304 (462)
T ss_dssp SCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEET-TEEEEEEEEEECCEE
T ss_pred cCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecC-CceeEEEEEeCCCcc
Confidence 3689999999988777766654 23344444 666665555555 677887765432 111111110 00
Q ss_pred --------------CCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCC
Q 036314 271 --------------HNSWISACKWHNKSWFHLISASYDGKVMLWDLRT 304 (347)
Q Consensus 271 --------------h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~ 304 (347)
-......+.++||+.++.++.-..+.|.++|+..
T Consensus 305 v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d 352 (462)
T 2ece_A 305 LEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISN 352 (462)
T ss_dssp CCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSS
T ss_pred ccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 0234678999999988777777889999999964
No 229
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.65 E-value=7.3e-06 Score=72.98 Aligned_cols=243 Identities=8% Similarity=0.024 Sum_probs=135.0
Q ss_pred ccCC-CCCEEEEEe----------cCCeEEEEcCC-CeEEEEeecc-------CCceEEEEEeecCCCceEEEEEcc--C
Q 036314 30 VDGS-NPGFILTGC----------YDNLGRVWKAG-GVCTHILEGH-------CGAVSSVNIIKSDGLKYVTVATAS--K 88 (347)
Q Consensus 30 ~~~~-~~~~l~sg~----------~d~~i~iw~~~-~~~~~~l~~h-------~~~V~~v~~~~~~~~~~~~l~s~s--~ 88 (347)
++++ ++++|..++ .++.|.+||.. .+.+..+.-. ...-..+.|+|++. +|+.+. .
T Consensus 83 va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk----~lyVan~~~ 158 (386)
T 3sjl_D 83 PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGK----TLLFYQFSP 158 (386)
T ss_dssp EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSS----EEEEEECSS
T ss_pred EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCC----EEEEEEcCC
Confidence 6667 455554433 36789999975 4555544311 11235688888553 444444 3
Q ss_pred CCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCc
Q 036314 89 DQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQ 168 (347)
Q Consensus 89 Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~ 168 (347)
+++|.++|+.+.+.+ .++.- ..+ ...+....+.+++.+.||++.+.++.+.... . ......
T Consensus 159 ~~~VsVID~~t~~vv---------~tI~v--~g~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v---~--~~~~~~-- 219 (386)
T 3sjl_D 159 APAVGVVDLEGKAFK---------RMLDV--PDC-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTP---E--ITHTEV-- 219 (386)
T ss_dssp SCEEEEEETTTTEEE---------EEEEC--CSE-EEEEEEETTEEEEEETTSCEEEEECCSSSCC---E--EEECCC--
T ss_pred CCeEEEEECCCCcEE---------EEEEC--CCc-ceeecCCCceeEEECCCCCEEEEECCCCCeE---E--Eeecce--
Confidence 789999999877543 22211 111 1223334567778888888888887642110 0 000000
Q ss_pred cccccccccccccccCCccceE-EEEe-CCCCeEEEEecCCcEEEEECCCCc--eeeeee--------e---CeeeEEEE
Q 036314 169 VEEPQLEGEAISTLVGHTQCVS-SVVW-PQQETIYSASWDHSVRTWDVEMGK--DLSDIF--------C---GKALNCID 233 (347)
Q Consensus 169 ~~~~~~~~~~~~~~~~h~~~v~-~~~~-~~~~~l~s~s~dg~v~vwd~~~~~--~~~~~~--------~---~~~~~~~~ 233 (347)
+..-...+. ...| +.+..++..+.+|++.+.|+..+. .+..+. . ......+.
T Consensus 220 -------------~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a 286 (386)
T 3sjl_D 220 -------------FHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVA 286 (386)
T ss_dssp -------------CSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEE
T ss_pred -------------eccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceee
Confidence 000000110 0123 223344446778999999987653 222222 0 11122355
Q ss_pred eeCCCCcEEEEec---------CCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEE-EeCCCcEEEEEcC
Q 036314 234 IGGEGSALIAAGG---------SDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLIS-ASYDGKVMLWDLR 303 (347)
Q Consensus 234 ~~~~~~~~la~~~---------~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s-~s~D~~i~lwd~~ 303 (347)
+++++..++++-. ..+.|.++|+...+ .+.++.- ...+..++++||+..+|.+ ...++.|-++|..
T Consensus 287 ~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~k---v~~~i~v-g~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~ 362 (386)
T 3sjl_D 287 YHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGE---RLAKFEM-GHEIDSINVSQDEKPLLYALSTGDKTLYIHDAE 362 (386)
T ss_dssp EETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCC---EEEEEEE-EEEECEEEECSSSSCEEEEEETTTTEEEEEETT
T ss_pred ECCCCCeEEEEeccccccccCCCCCEEEEEECCCCe---EEEEEEC-CCCcceEEECCCCCeEEEEEcCCCCeEEEEECC
Confidence 6666665555432 13579999987532 2333322 1357789999998634555 4568999999999
Q ss_pred CCccceeec
Q 036314 304 TAWPLSVID 312 (347)
Q Consensus 304 ~~~~~~~~~ 312 (347)
+++.++++.
T Consensus 363 t~k~~~~i~ 371 (386)
T 3sjl_D 363 SGEELRSVN 371 (386)
T ss_dssp TCCEEEEEC
T ss_pred CCcEEEEec
Confidence 998887764
No 230
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.64 E-value=3.2e-06 Score=74.65 Aligned_cols=201 Identities=8% Similarity=-0.038 Sum_probs=117.4
Q ss_pred cceEEEEEeCCCCEEEEee--CCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeCCC
Q 036314 120 ASVHSIAAETSGNMVCSGS--WDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQ 197 (347)
Q Consensus 120 ~~V~~v~~s~~~~~l~sgs--~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 197 (347)
..+..++++++|+++++.. .++.++||.+.++. . ... +... ....+|-..+.++++...
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~----~---~~~--------p~~~----~~~~~~~~~p~gv~~d~~ 77 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDG----L---IPF--------PPQS----GNAIITFDTVLGIKSDGN 77 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTE----E---EES--------CCCC----SSCCCCCSCEEEEEECSS
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCC----e---ecC--------CCcc----cCcccceeEeeEEEEcCC
Confidence 5688999999999998864 23436667654211 0 000 0000 011234456788888544
Q ss_pred CeEEEEec------CCcEEEEECCCCceeeeeeeC-------eeeEEEEeeCCCCcEEEEec---CCCcEEEEeCCCCCC
Q 036314 198 ETIYSASW------DHSVRTWDVEMGKDLSDIFCG-------KALNCIDIGGEGSALIAAGG---SDPILRIWDPRKPGT 261 (347)
Q Consensus 198 ~~l~s~s~------dg~v~vwd~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~la~~~---~d~~i~iwd~~~~~~ 261 (347)
..|+.+.. ++.|.+||+.+++.+..+... ..+..+++.+.++.++++.. .++.|.+||+....
T Consensus 78 g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~- 156 (343)
T 2qe8_A 78 GIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGL- 156 (343)
T ss_dssp SEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCC-
T ss_pred CcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCC-
Confidence 45544432 478999999988766555432 23467888766566666655 67899999986321
Q ss_pred CCCeEEecCC-----------------------------CCCeeEEEeCCCCCeEEEEEeCCC-cEEEEEcC---CCc--
Q 036314 262 SAPVFQFSSH-----------------------------NSWISACKWHNKSWFHLISASYDG-KVMLWDLR---TAW-- 306 (347)
Q Consensus 262 ~~~~~~~~~h-----------------------------~~~v~~v~~s~~~~~~l~s~s~D~-~i~lwd~~---~~~-- 306 (347)
....+.+| ...+..++|+|++.. |..+..++ .+..++.. .+.
T Consensus 157 --~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~-ly~~~~~~~~l~~~~~~~~~~~~~~ 233 (343)
T 2qe8_A 157 --AARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEW-LYLSPMHSTSMYRIKSADLSNLQLT 233 (343)
T ss_dssp --EEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCE-EEEEESSCSEEEEEEHHHHTCTTCC
T ss_pred --EEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCE-EEEEeCCCCeEEEEEHHHhcCCCCC
Confidence 11112111 123578999999865 55555554 44444432 111
Q ss_pred ---cce--eecCCCCeEEEEeec-CCCEEEEccCCceEEEeec
Q 036314 307 ---PLS--VIDSHKDKVLCADWW-RGDSVISGGVDSKLCVSSG 343 (347)
Q Consensus 307 ---~~~--~~~~h~~~v~~~~~~-~~~~l~s~s~D~~v~vw~~ 343 (347)
... ...++.+...++++. +|..+++...++.|.+|+-
T Consensus 234 ~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~ 276 (343)
T 2qe8_A 234 DAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITS 276 (343)
T ss_dssp HHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEET
T ss_pred hhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEEC
Confidence 001 112344445567775 5777888888899999974
No 231
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.62 E-value=2.4e-06 Score=77.35 Aligned_cols=248 Identities=7% Similarity=-0.016 Sum_probs=137.7
Q ss_pred CeEEEEcCC-CeEEEEeeccCCceEEEEEeecCCCceEEEEEcc----------CCCcEEEEeccccccccCccccceee
Q 036314 45 NLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATAS----------KDQTLRLWKFDAEELVNHPKKIRSFK 113 (347)
Q Consensus 45 ~~i~iw~~~-~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s----------~Dg~v~~wd~~~~~~~~~~~~~~~~~ 113 (347)
++|.+.|.. .+.+..+.--..+ .+.++|++. .|+.+. .++.|.++|..+.+.. .
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk----~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv---------~ 163 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGS----FFAQASTVFERIARGKRTDYVEVFDPVTFLPI---------A 163 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECSSC--EEEECTTSS----CEEEEEEEEEETTEEEEEEEEEEECTTTCCEE---------E
T ss_pred CeEEEEECCCCEEEEEEECCCCC--ceEECCCCC----EEEEEeccccccccCCCCCEEEEEECCCCcEE---------E
Confidence 689999975 5556655533334 799999654 244333 4678999998876532 2
Q ss_pred eee-c------cccceEEEEEeCCCCEEEEeeC--CCcEEEEecCCCCCCCccce-----e--ee-------ccCCCccc
Q 036314 114 ILR-G------HKASVHSIAAETSGNMVCSGSW--DCTISLWRTNDSDAAGNQVS-----I--KK-------RKGNNQVE 170 (347)
Q Consensus 114 ~~~-~------h~~~V~~v~~s~~~~~l~sgs~--Dg~I~iwd~~~~~~~~~~~~-----~--~~-------~~~~~~~~ 170 (347)
.+. + .......++|+|||++++.+.. +++|.+.|+.+......... . .. ........
T Consensus 164 ~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~ 243 (426)
T 3c75_H 164 DIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLAR 243 (426)
T ss_dssp EEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEE
T ss_pred EEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEE
Confidence 221 1 0122345789999999998774 57899999987643211100 0 00 00000000
Q ss_pred ccccccccc----ccccCCccceE-EEEe-CCCCeEEEEecCCcEEEEECCCCcee--eeeee--------C---eeeEE
Q 036314 171 EPQLEGEAI----STLVGHTQCVS-SVVW-PQQETIYSASWDHSVRTWDVEMGKDL--SDIFC--------G---KALNC 231 (347)
Q Consensus 171 ~~~~~~~~~----~~~~~h~~~v~-~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~--~~~~~--------~---~~~~~ 231 (347)
.....++.. ..+.....++. .+.+ ++++.++..+..+++.+.|+...... ..+.. . .....
T Consensus 244 V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~ 323 (426)
T 3c75_H 244 VDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQ 323 (426)
T ss_dssp EECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSC
T ss_pred EECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCcee
Confidence 000000000 00000011110 1122 45566666677888999998654311 11110 0 11112
Q ss_pred EEeeCCCCcEEEEec---------CCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEe-CCCcEEEEE
Q 036314 232 IDIGGEGSALIAAGG---------SDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISAS-YDGKVMLWD 301 (347)
Q Consensus 232 ~~~~~~~~~~la~~~---------~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s-~D~~i~lwd 301 (347)
+.+++++..++++.. .++.|.++|+...+ .+.++... .....+.|+||+..+|+++. .++.|-++|
T Consensus 324 va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~k---vv~~I~vg-~~P~gia~spDg~~~lyv~n~~s~~VsVID 399 (426)
T 3c75_H 324 TAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGE---RINKIELG-HEIDSINVSQDAEPLLYALSAGTQTLHIYD 399 (426)
T ss_dssp EEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCC---EEEEEEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEE
T ss_pred eEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCe---EEEEEECC-CCcCeEEEccCCCEEEEEEcCCCCeEEEEE
Confidence 567776666665532 24579999987532 24444322 24678999999974566666 699999999
Q ss_pred cCCCccceee
Q 036314 302 LRTAWPLSVI 311 (347)
Q Consensus 302 ~~~~~~~~~~ 311 (347)
..+++.++++
T Consensus 400 ~~t~kvv~tI 409 (426)
T 3c75_H 400 AATGEELRSV 409 (426)
T ss_dssp TTTCCEEEEE
T ss_pred CCCCCEEEEe
Confidence 9999888876
No 232
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.60 E-value=0.00017 Score=60.93 Aligned_cols=245 Identities=13% Similarity=0.057 Sum_probs=138.9
Q ss_pred EEEEEecCCeEEEEcCCCeEE------EEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccc
Q 036314 37 FILTGCYDNLGRVWKAGGVCT------HILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIR 110 (347)
Q Consensus 37 ~l~sg~~d~~i~iw~~~~~~~------~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~ 110 (347)
+|+.+.. +.|+.++..+... ..+.........+++.+.++ ...++-...+.|..++++....
T Consensus 3 ~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~---~ly~~d~~~~~I~~~~~~g~~~-------- 70 (267)
T 1npe_A 3 HLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDK---VVYWTDISEPSIGRASLHGGEP-------- 70 (267)
T ss_dssp EEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTT---EEEEEETTTTEEEEEESSSCCC--------
T ss_pred EEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCC---EEEEEECCCCEEEEEecCCCCc--------
Confidence 3444433 3677777654321 12222223467888887543 3456666778999999865421
Q ss_pred eeeeeeccccceEEEEEeCCCC-EEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccce
Q 036314 111 SFKILRGHKASVHSIAAETSGN-MVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCV 189 (347)
Q Consensus 111 ~~~~~~~h~~~V~~v~~s~~~~-~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 189 (347)
...+.........+++++++. +.++-...+.|.+++...... . .+ ........
T Consensus 71 -~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~----~-------------------~~--~~~~~~~P 124 (267)
T 1npe_A 71 -TTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR----R-------------------VL--FDTGLVNP 124 (267)
T ss_dssp -EEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC----E-------------------EE--ECSSCSSE
T ss_pred -EEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCE----E-------------------EE--EECCCCCc
Confidence 111222224568899998755 555556678899888753210 0 00 00001223
Q ss_pred EEEEe-CCCCeEEEEec---CCcEEEEECCCCceeeeeee--CeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCC
Q 036314 190 SSVVW-PQQETIYSASW---DHSVRTWDVEMGKDLSDIFC--GKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSA 263 (347)
Q Consensus 190 ~~~~~-~~~~~l~s~s~---dg~v~vwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~ 263 (347)
..+++ ++++.|+.+.. .+.|..+++.. .....+.. ......++++++++.++++....+.|..+|+....
T Consensus 125 ~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg-~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~--- 200 (267)
T 1npe_A 125 RGIVTDPVRGNLYWTDWNRDNPKIETSHMDG-TNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPG--- 200 (267)
T ss_dssp EEEEEETTTTEEEEEECCSSSCEEEEEETTS-CCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEE---
T ss_pred cEEEEeeCCCEEEEEECCCCCcEEEEEecCC-CCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCc---
Confidence 56666 44666655554 35788888653 22222221 12456788887777777777778999999986321
Q ss_pred CeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCC-CeEEEEeecCC
Q 036314 264 PVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHK-DKVLCADWWRG 326 (347)
Q Consensus 264 ~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~-~~v~~~~~~~~ 326 (347)
....+. .......++.. +.+++++...++.|.++|..+++.+.++.... ...+++++.|+
T Consensus 201 ~~~~~~-~~~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~ 261 (267)
T 1npe_A 201 RRKVLE-GLQYPFAVTSY--GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIALS 261 (267)
T ss_dssp EEEEEE-CCCSEEEEEEE--TTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEECS
T ss_pred eEEEec-CCCCceEEEEe--CCEEEEEECCCCeEEEEeCCCCCceEEEccccccccceeeecCc
Confidence 111222 22333455553 44556665667899999999888777764322 24566776544
No 233
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.60 E-value=9.3e-06 Score=78.59 Aligned_cols=292 Identities=12% Similarity=0.126 Sum_probs=150.7
Q ss_pred CCEEEEEecCCeEEEEcC-CCeEEEEeeccCCc----------e-EEEEEeecCCCceEEEEEccCCCcEEEEecccccc
Q 036314 35 PGFILTGCYDNLGRVWKA-GGVCTHILEGHCGA----------V-SSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEEL 102 (347)
Q Consensus 35 ~~~l~sg~~d~~i~iw~~-~~~~~~~l~~h~~~----------V-~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~ 102 (347)
++.|..++.++.+..+|. +|+.+..+..+... + ..+.+. ++ .|+.++.|+.|..+|..+++.
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~--~g----~v~v~~~dg~l~AlDa~TG~~ 143 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVW--KG----KVYVGVLDGRLEAIDAKTGQR 143 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEE--TT----EEEEECTTSEEEEEETTTCCE
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEE--CC----EEEEEccCCEEEEEECCCCCE
Confidence 567777888899999996 57777666533221 1 112221 22 477888999999999988864
Q ss_pred ccCcccc-ceeeeeeccccceEEEEEeCCCCEEEEee-----CCCcEEEEecCCCCCCCccceeeeccCCCccc------
Q 036314 103 VNHPKKI-RSFKILRGHKASVHSIAAETSGNMVCSGS-----WDCTISLWRTNDSDAAGNQVSIKKRKGNNQVE------ 170 (347)
Q Consensus 103 ~~~~~~~-~~~~~~~~h~~~V~~v~~s~~~~~l~sgs-----~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~------ 170 (347)
+=..... ...........++ + .++..++..+ .|+.|..||..+++....... ........
T Consensus 144 ~W~~~~~~~~~~~~~~~~sP~--v---~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~---~~~~p~~~~~~~~~ 215 (689)
T 1yiq_A 144 AWSVDTRADHKRSYTITGAPR--V---VNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYT---VPGDPKLPPEGKGM 215 (689)
T ss_dssp EEEEECCSCTTSCCBCCSCCE--E---ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES---SCCCTTSCCCSHHH
T ss_pred eeeecCcCCCCCCccccCCcE--E---ECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecc---cCCCcccccccccc
Confidence 3110000 0000000011121 1 1444444332 378999999987653211100 00000000
Q ss_pred ---cccccccccccccCCccceEEEEe-CCCCeEEEEecCCc-------------------EEEEECCCCceeeeeeeC-
Q 036314 171 ---EPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHS-------------------VRTWDVEMGKDLSDIFCG- 226 (347)
Q Consensus 171 ---~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~-------------------v~vwd~~~~~~~~~~~~~- 226 (347)
.....+.......++......+++ ++.+.++.++.++. |..+|.++++.+=..+..
T Consensus 216 ~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~ 295 (689)
T 1yiq_A 216 EIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTP 295 (689)
T ss_dssp HHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESST
T ss_pred cccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCC
Confidence 000000000000011111112344 45677887777753 999999999876444321
Q ss_pred ---------eeeEEEEeeCCC--CcEEEEecCCCcEEEEeCCCCCCCCCeEEec--------------------------
Q 036314 227 ---------KALNCIDIGGEG--SALIAAGGSDPILRIWDPRKPGTSAPVFQFS-------------------------- 269 (347)
Q Consensus 227 ---------~~~~~~~~~~~~--~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~-------------------------- 269 (347)
.+....++..++ ...++.++.+|.++++|.+..+. .-...+.
T Consensus 296 ~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~-l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~ 374 (689)
T 1yiq_A 296 GDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGEL-LSAKGIVPQSWTKGMDMKTGRPILDEENAAYWK 374 (689)
T ss_dssp TCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE-EEEEESSCCSSEEEEETTTTEEEECHHHHCTTT
T ss_pred cccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCE-eccccccccccccccCccCCCcccchhhccccC
Confidence 111122221122 12677888999999999865321 0000000
Q ss_pred ------------CCCCCeeEEEeCCCCCeEEEEEeC--------------------------------------------
Q 036314 270 ------------SHNSWISACKWHNKSWFHLISASY-------------------------------------------- 293 (347)
Q Consensus 270 ------------~h~~~v~~v~~s~~~~~~l~s~s~-------------------------------------------- 293 (347)
+...+ ..++++|+... +.....
T Consensus 375 ~~~~~~~~p~~~Gg~~w-~~~a~dp~~~~-~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~ 452 (689)
T 1yiq_A 375 NGKRNLVTPAFWGAHDW-QPMSYNPDTGL-VYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKS 452 (689)
T ss_dssp SSSCEEESSCTTCSSCS-SCCEEETTTTE-EEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTT
T ss_pred CCCeeEeCCCcccccCC-CcceECCCCCE-EEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCC
Confidence 00111 12678887764 443311
Q ss_pred -CCcEEEEEcCCCccceeecCCCCeEEEEeec-CCCEEEEccCCceEEEeecc
Q 036314 294 -DGKVMLWDLRTAWPLSVIDSHKDKVLCADWW-RGDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 294 -D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~-~~~~l~s~s~D~~v~vw~~~ 344 (347)
+|.|..||+++++.+-.+..+. .+....+. .+..+..++.|+.|+.|+--
T Consensus 453 ~~g~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~gt~dg~l~a~D~~ 504 (689)
T 1yiq_A 453 WSGKLIAWDPVKQQAAWEVPYVT-IFNGGTLSTAGNLVFEGSADGRVIAYAAD 504 (689)
T ss_dssp CEEEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETT
T ss_pred cceeEEEEECCCCCeEeEccCCC-CccCccceECCCEEEEECCCCcEEEEECC
Confidence 4789999999998665554433 23322333 57788889999999999843
No 234
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.49 E-value=2.2e-05 Score=76.01 Aligned_cols=76 Identities=16% Similarity=0.212 Sum_probs=46.4
Q ss_pred CCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeE-EEEee-cC
Q 036314 248 DPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKV-LCADW-WR 325 (347)
Q Consensus 248 d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v-~~~~~-~~ 325 (347)
++.|+.||+...+ .+.++..+... ..-.+...+. +++.++.|+.++.||.++|+.+-.+....+.. .-+.| .+
T Consensus 454 ~g~l~A~D~~tG~---~~W~~~~~~~~-~~g~~~tagg-lvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~ 528 (689)
T 1yiq_A 454 SGKLIAWDPVKQQ---AAWEVPYVTIF-NGGTLSTAGN-LVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVD 528 (689)
T ss_dssp EEEEEEEETTTTE---EEEEEEESSSC-CCCEEEETTT-EEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEET
T ss_pred ceeEEEEECCCCC---eEeEccCCCCc-cCccceECCC-EEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEEC
Confidence 3778899986432 23333333322 2223333443 58889999999999999999887775432221 23556 36
Q ss_pred CCE
Q 036314 326 GDS 328 (347)
Q Consensus 326 ~~~ 328 (347)
|++
T Consensus 529 G~q 531 (689)
T 1yiq_A 529 GEQ 531 (689)
T ss_dssp TEE
T ss_pred CEE
Confidence 765
No 235
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.43 E-value=6.5e-05 Score=72.53 Aligned_cols=267 Identities=12% Similarity=0.057 Sum_probs=142.0
Q ss_pred CCCEEEEEecCCeEEEEcC-CCeEEEEeecc-C----CceEE-EEEeecCCCceEEEEEccC------CCcEEEEecccc
Q 036314 34 NPGFILTGCYDNLGRVWKA-GGVCTHILEGH-C----GAVSS-VNIIKSDGLKYVTVATASK------DQTLRLWKFDAE 100 (347)
Q Consensus 34 ~~~~l~sg~~d~~i~iw~~-~~~~~~~l~~h-~----~~V~~-v~~~~~~~~~~~~l~s~s~------Dg~v~~wd~~~~ 100 (347)
.++.|+.++.|+.+..+|. +|+.+..+..+ . ..+.+ ..+ . ++ .++.++. ++.|+.||..++
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v-~-~~----~v~v~~~~~~~~~~g~v~a~D~~tG 200 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRV-F-KG----KVIIGNGGAEYGVRGYITAYDAETG 200 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEE-E-TT----EEEECCBCTTTCCBCEEEEEETTTC
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEE-E-CC----EEEEEecccccCCCCEEEEEECCCC
Confidence 3567888889999999997 58777766654 1 11221 111 1 21 2344432 789999999888
Q ss_pred ccccCcccccee--------------eeee---------ccccceEEEEEeCCCCEEEEeeCCC----------------
Q 036314 101 ELVNHPKKIRSF--------------KILR---------GHKASVHSIAAETSGNMVCSGSWDC---------------- 141 (347)
Q Consensus 101 ~~~~~~~~~~~~--------------~~~~---------~h~~~V~~v~~s~~~~~l~sgs~Dg---------------- 141 (347)
+.+-........ .+.. +.......+++++++.+++.++.++
T Consensus 201 ~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~ 280 (677)
T 1kb0_A 201 ERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNL 280 (677)
T ss_dssp CEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCT
T ss_pred cEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCe
Confidence 653110000000 0000 1111223578889888888777664
Q ss_pred ---cEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceE-EEEeCCC---CeEEEEecCCcEEEEEC
Q 036314 142 ---TISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVS-SVVWPQQ---ETIYSASWDHSVRTWDV 214 (347)
Q Consensus 142 ---~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~-~~~~~~~---~~l~s~s~dg~v~vwd~ 214 (347)
+|..+|..+++..... +.... ....+.....++. ... .++ +.++.++.+|.+.++|.
T Consensus 281 ~~~sv~AlD~~TG~~~W~~----~~~~~-----------d~wd~~~~~~p~l~~~~-~dG~~~~~l~~~~~~G~l~~lD~ 344 (677)
T 1kb0_A 281 YLASIVALDPDTGKYKWHY----QETPG-----------DNWDYTSTQPMILADIK-IAGKPRKVILHAPKNGFFFVLDR 344 (677)
T ss_dssp TTTEEEEECTTTCCEEEEE----ESSTT-----------CCSCCCCCSCCEEEEEE-ETTEEEEEEEECCTTSEEEEEET
T ss_pred eeEEEEEEECCCCCEEEEE----ecCCC-----------cccccccCCCcEEEecc-cCCcEeeEEEEECCCCEEEEEEC
Confidence 3666666654321100 00000 0000000011111 111 144 56888999999999999
Q ss_pred CCCceeeeeeeCe------------ee------------------------EEEEeeCCCCcEEEEecC-----------
Q 036314 215 EMGKDLSDIFCGK------------AL------------------------NCIDIGGEGSALIAAGGS----------- 247 (347)
Q Consensus 215 ~~~~~~~~~~~~~------------~~------------------------~~~~~~~~~~~~la~~~~----------- 247 (347)
++++.+....... ++ ..+++++..+ ++.+...
T Consensus 345 ~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~-~~yv~~~~~~~~~~~~~~ 423 (677)
T 1kb0_A 345 TNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTG-LVYLPAQNVPVNLMDDKK 423 (677)
T ss_dssp TTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTT-EEEEEEEECCCEEEECTT
T ss_pred CCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCC-EEEEeChhcceeeecccc
Confidence 9998765443211 00 1235555444 3333221
Q ss_pred --------------------------------CCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCC
Q 036314 248 --------------------------------DPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDG 295 (347)
Q Consensus 248 --------------------------------d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~ 295 (347)
.+.|..||+...+ .+.++. +...+....+..++. +++.++.|+
T Consensus 424 ~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~---~~W~~~-~~~~~~~g~~~~~g~-~v~~g~~dg 498 (677)
T 1kb0_A 424 WEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQK---AAWSVE-HVSPWNGGTLTTAGN-VVFQGTADG 498 (677)
T ss_dssp CCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTE---EEEEEE-ESSSCCCCEEEETTT-EEEEECTTS
T ss_pred cccccccccccccccccccccccccccCCCCCccEEEEEeCCCCc---EEeecC-CCCCCcCcceEeCCC-EEEEECCCC
Confidence 2678899986432 233332 222233333444554 477789999
Q ss_pred cEEEEEcCCCccceeecCCC-CeEEEEee-cCCCE
Q 036314 296 KVMLWDLRTAWPLSVIDSHK-DKVLCADW-WRGDS 328 (347)
Q Consensus 296 ~i~lwd~~~~~~~~~~~~h~-~~v~~~~~-~~~~~ 328 (347)
.+++||.++++.+..+.-.. ....-+.| .+|++
T Consensus 499 ~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~ 533 (677)
T 1kb0_A 499 RLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQ 533 (677)
T ss_dssp EEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred cEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEE
Confidence 99999999999888775332 22223455 35664
No 236
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.40 E-value=7.5e-05 Score=72.10 Aligned_cols=284 Identities=14% Similarity=0.145 Sum_probs=149.6
Q ss_pred CCEEEEEecCCeEEEEcC-CCeEEEEeeccCC----------ce-EEEEEeecCCCceEEEEEccCCCcEEEEecccccc
Q 036314 35 PGFILTGCYDNLGRVWKA-GGVCTHILEGHCG----------AV-SSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEEL 102 (347)
Q Consensus 35 ~~~l~sg~~d~~i~iw~~-~~~~~~~l~~h~~----------~V-~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~ 102 (347)
++.|..++.++.+..+|. +|+.+..+..... .+ ..+.+. ++ .|+.++.|+.|..+|..+++.
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~--~~----~v~v~~~dg~l~alD~~tG~~ 150 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALW--KG----KVYVGAWDGRLIALDAATGKE 150 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEE--TT----EEEEECTTSEEEEEETTTCCE
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEE--CC----EEEEEcCCCEEEEEECCCCCE
Confidence 566777778889999996 5777666553321 01 123322 22 477788999999999988764
Q ss_pred ccCccccceeeeeecc-c----cceEEEEEeCCCCEEEEeeC------CCcEEEEecCCCCCCCccceeeeccCC-Cccc
Q 036314 103 VNHPKKIRSFKILRGH-K----ASVHSIAAETSGNMVCSGSW------DCTISLWRTNDSDAAGNQVSIKKRKGN-NQVE 170 (347)
Q Consensus 103 ~~~~~~~~~~~~~~~h-~----~~V~~v~~s~~~~~l~sgs~------Dg~I~iwd~~~~~~~~~~~~~~~~~~~-~~~~ 170 (347)
+- .+..+ . ..+.+.-.-.++ .++.++. ++.|+.||..+++....... .... ..+.
T Consensus 151 ~W---------~~~~~~~~~~~~~~~~~p~v~~~-~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~---~~~~~~~~~ 217 (677)
T 1kb0_A 151 VW---------HQNTFEGQKGSLTITGAPRVFKG-KVIIGNGGAEYGVRGYITAYDAETGERKWRWFS---VPGDPSKPF 217 (677)
T ss_dssp EE---------EEETTTTCCSSCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEES---SCCCTTSCC
T ss_pred Ee---------eecCCcCcCcCcccccCcEEECC-EEEEEecccccCCCCEEEEEECCCCcEEEEecc---CCCCccccc
Confidence 31 11111 0 111110001134 4444443 78999999987653211100 0000 0000
Q ss_pred c--------cccc--ccccccccCCccceEEEEe-CCCCeEEEEecCC-------------------cEEEEECCCCcee
Q 036314 171 E--------PQLE--GEAISTLVGHTQCVSSVVW-PQQETIYSASWDH-------------------SVRTWDVEMGKDL 220 (347)
Q Consensus 171 ~--------~~~~--~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg-------------------~v~vwd~~~~~~~ 220 (347)
. ..+. +... ...+.......+++ ++++.++.++.++ +|..+|.++++.+
T Consensus 218 ~~~~~~~g~~~w~~~g~~~-~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~ 296 (677)
T 1kb0_A 218 EDESMKRAARTWDPSGKWW-EAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYK 296 (677)
T ss_dssp SSHHHHHHHTTSCGGGCHH-HHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEE
T ss_pred cccccccccccccccCcee-EeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEE
Confidence 0 0000 0000 00011111122344 4566777666553 4899999999876
Q ss_pred eeeeeC----------eeeEEEEeeCCCC--cEEEEecCCCcEEEEeCCCCCCCCCeEEec-------------------
Q 036314 221 SDIFCG----------KALNCIDIGGEGS--ALIAAGGSDPILRIWDPRKPGTSAPVFQFS------------------- 269 (347)
Q Consensus 221 ~~~~~~----------~~~~~~~~~~~~~--~~la~~~~d~~i~iwd~~~~~~~~~~~~~~------------------- 269 (347)
-..+.. ..........++. ..++.++.+|.++++|.+..+. +..+.
T Consensus 297 W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~---l~~~~~~~~~~~~~~d~~g~~~~~ 373 (677)
T 1kb0_A 297 WHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKF---ISAKNFVPVNWASGYDKHGKPIGI 373 (677)
T ss_dssp EEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE---EEEEESSCCSSEEEECTTSCEEEC
T ss_pred EEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCE---eccccccccCcccccCCCCceeec
Confidence 443321 1112222212221 5678889999999999865321 21111
Q ss_pred -----------------CCCCCeeEEEeCCCCCeEEEEEeC---------------------------------------
Q 036314 270 -----------------SHNSWISACKWHNKSWFHLISASY--------------------------------------- 293 (347)
Q Consensus 270 -----------------~h~~~v~~v~~s~~~~~~l~s~s~--------------------------------------- 293 (347)
+...+ ..++++|++.. +.....
T Consensus 374 ~~~~~~~~~~~~~P~~~G~~~w-~~~a~dp~~~~-~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~ 451 (677)
T 1kb0_A 374 AAARDGSKPQDAVPGPYGAHNW-HPMSFNPQTGL-VYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPP 451 (677)
T ss_dssp GGGGCTTSCEECSSCTTCSSCS-SCCEEETTTTE-EEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCC
T ss_pred cccCcCCCccEECcCcccccCC-CCceEcCCCCE-EEEeChhcceeeecccccccccccccccccccccccccccccccC
Confidence 01111 24678888765 444322
Q ss_pred ----CCcEEEEEcCCCccceeecCCCCeEEEEeec-CCCEEEEccCCceEEEeecc
Q 036314 294 ----DGKVMLWDLRTAWPLSVIDSHKDKVLCADWW-RGDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 294 ----D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~-~~~~l~s~s~D~~v~vw~~~ 344 (347)
.+.|..||+++++.+-.+. +...+++..+. .+..+..++.|+.+++|+.-
T Consensus 452 ~~~~~g~l~A~D~~tG~~~W~~~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~ 506 (677)
T 1kb0_A 452 KSKPFGRLLAWDPVAQKAAWSVE-HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAA 506 (677)
T ss_dssp CSCCEEEEEEEETTTTEEEEEEE-ESSSCCCCEEEETTTEEEEECTTSEEEEEETT
T ss_pred CCCCccEEEEEeCCCCcEEeecC-CCCCCcCcceEeCCCEEEEECCCCcEEEEECC
Confidence 2789999999987655543 22333433343 56777888999999999854
No 237
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.37 E-value=9.7e-05 Score=62.27 Aligned_cols=190 Identities=9% Similarity=0.036 Sum_probs=117.9
Q ss_pred ceEEEEEeCCCCEEEEeeC--CCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeCCCC
Q 036314 121 SVHSIAAETSGNMVCSGSW--DCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQE 198 (347)
Q Consensus 121 ~V~~v~~s~~~~~l~sgs~--Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 198 (347)
....++|++++.+.++.+. +++|++.|..+++..... .+..+ .....+++. ++
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i-----------------------~l~~~-~fgeGi~~~-g~ 76 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIH-----------------------KMDDS-YFGEGLTLL-NE 76 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEE-----------------------ECCTT-CCEEEEEEE-TT
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEE-----------------------ecCCC-cceEEEEEe-CC
Confidence 3578999998766665553 689999998875421100 00011 111234433 34
Q ss_pred eEE-EEecCCcEEEEECCCCceeeeeeeC-eeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEec--CCC--
Q 036314 199 TIY-SASWDHSVRTWDVEMGKDLSDIFCG-KALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFS--SHN-- 272 (347)
Q Consensus 199 ~l~-s~s~dg~v~vwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~--~h~-- 272 (347)
.|+ +.-.++.+.++|..+.+.+.++..+ ..- ..+.+++..++++. .++.|.++|+.... ....+. .+.
T Consensus 77 ~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~~g--~glt~Dg~~l~vs~-gs~~l~viD~~t~~---v~~~I~Vg~~~~p 150 (266)
T 2iwa_A 77 KLYQVVWLKNIGFIYDRRTLSNIKNFTHQMKDG--WGLATDGKILYGSD-GTSILYEIDPHTFK---LIKKHNVKYNGHR 150 (266)
T ss_dssp EEEEEETTCSEEEEEETTTTEEEEEEECCSSSC--CEEEECSSSEEEEC-SSSEEEEECTTTCC---EEEEEECEETTEE
T ss_pred EEEEEEecCCEEEEEECCCCcEEEEEECCCCCe--EEEEECCCEEEEEC-CCCeEEEEECCCCc---EEEEEEECCCCcc
Confidence 554 4445689999999998888877644 222 22444666676665 58899999986432 223322 111
Q ss_pred -CCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCC-------------CCeEEEEeecC-CC-EEEEccCCc
Q 036314 273 -SWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSH-------------KDKVLCADWWR-GD-SVISGGVDS 336 (347)
Q Consensus 273 -~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h-------------~~~v~~~~~~~-~~-~l~s~s~D~ 336 (347)
...+.+.|. ++ .+.+....++.|.+.|.++++.+.++.-. .....+++|.+ ++ .++++....
T Consensus 151 ~~~~nele~~-dg-~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~ 228 (266)
T 2iwa_A 151 VIRLNELEYI-NG-EVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWP 228 (266)
T ss_dssp CCCEEEEEEE-TT-EEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCS
T ss_pred cccceeEEEE-CC-EEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCC
Confidence 235677777 55 44555556789999999999887776421 13457899985 44 478887777
Q ss_pred eEEEeec
Q 036314 337 KLCVSSG 343 (347)
Q Consensus 337 ~v~vw~~ 343 (347)
+|.+-+.
T Consensus 229 ~v~~i~l 235 (266)
T 2iwa_A 229 KLFEIKL 235 (266)
T ss_dssp EEEEEEE
T ss_pred eEEEEEE
Confidence 7766543
No 238
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.30 E-value=0.0011 Score=55.76 Aligned_cols=219 Identities=6% Similarity=-0.030 Sum_probs=123.1
Q ss_pred CcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCC-EEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCc
Q 036314 90 QTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGN-MVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQ 168 (347)
Q Consensus 90 g~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~-~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~ 168 (347)
+.|+.++++..... .......+......+..+++++++. ++++-...+.|..++...... .
T Consensus 10 ~~I~~~~~~g~~~~----~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~----~---------- 71 (267)
T 1npe_A 10 GKIERLPLERNTMK----KTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEP----T---------- 71 (267)
T ss_dssp EEEEEEEESSSCBC----GGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCC----E----------
T ss_pred CeEEEEEecCcccc----cccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCc----E----------
Confidence 47888887654311 0001111222234567899998655 555666678999998754211 0
Q ss_pred cccccccccccccccCCccceEEEEe-CCCCeEEEE-ecCCcEEEEECCCCceeeeee-eC-eeeEEEEeeCCCCcEEEE
Q 036314 169 VEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSA-SWDHSVRTWDVEMGKDLSDIF-CG-KALNCIDIGGEGSALIAA 244 (347)
Q Consensus 169 ~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~-s~dg~v~vwd~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~la~ 244 (347)
............+++ ++++.|+.+ ...+.|.++++.... ...+. .. .....+++++.++.++++
T Consensus 72 -----------~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~-~~~~~~~~~~~P~~i~vd~~~g~lyv~ 139 (267)
T 1npe_A 72 -----------TIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQ-RRVLFDTGLVNPRGIVTDPVRGNLYWT 139 (267)
T ss_dssp -----------EEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECSSCSSEEEEEEETTTTEEEEE
T ss_pred -----------EEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCC-EEEEEECCCCCccEEEEeeCCCEEEEE
Confidence 000011123456666 345555444 456789999986432 22222 12 345778888766666666
Q ss_pred ecC--CCcEEEEeCCCCCCCCCeEEe-cCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEE
Q 036314 245 GGS--DPILRIWDPRKPGTSAPVFQF-SSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCA 321 (347)
Q Consensus 245 ~~~--d~~i~iwd~~~~~~~~~~~~~-~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~ 321 (347)
... .+.|..+++... . ...+ .........++++|++.++.++-...+.|.++|++.......+.+ .....++
T Consensus 140 ~~~~~~~~I~~~~~dg~--~--~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~-~~~P~gi 214 (267)
T 1npe_A 140 DWNRDNPKIETSHMDGT--N--RRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEG-LQYPFAV 214 (267)
T ss_dssp ECCSSSCEEEEEETTSC--C--CEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEEC-CCSEEEE
T ss_pred ECCCCCcEEEEEecCCC--C--cEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecC-CCCceEE
Confidence 543 468888887532 1 1222 223345688999998777677777788999999975433222332 2233455
Q ss_pred eecCCCEEEEccCCceEEEeec
Q 036314 322 DWWRGDSVISGGVDSKLCVSSG 343 (347)
Q Consensus 322 ~~~~~~~l~s~s~D~~v~vw~~ 343 (347)
+...+..+++....+.|.+.+.
T Consensus 215 ~~d~~~lyva~~~~~~v~~~d~ 236 (267)
T 1npe_A 215 TSYGKNLYYTDWKTNSVIAMDL 236 (267)
T ss_dssp EEETTEEEEEETTTTEEEEEET
T ss_pred EEeCCEEEEEECCCCeEEEEeC
Confidence 5443444555555667766653
No 239
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.29 E-value=0.00017 Score=60.24 Aligned_cols=177 Identities=10% Similarity=0.011 Sum_probs=108.2
Q ss_pred eEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeCCCCeEE
Q 036314 122 VHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQETIY 201 (347)
Q Consensus 122 V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~ 201 (347)
...+.|+ ++.+..+.+.+|.|+++|+++++..... +.. .-.-..++...+....
T Consensus 57 tqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~------------------------l~~-~~FgeGit~~g~~Ly~ 110 (268)
T 3nok_A 57 TQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME------------------------RLG-NIFAEGLASDGERLYQ 110 (268)
T ss_dssp EEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE------------------------ECT-TCCEEEEEECSSCEEE
T ss_pred cceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE------------------------CCC-CcceeEEEEeCCEEEE
Confidence 4678887 4677788899999999998875432110 111 1111234443334444
Q ss_pred EEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEec--CCC---CCee
Q 036314 202 SASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFS--SHN---SWIS 276 (347)
Q Consensus 202 s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~--~h~---~~v~ 276 (347)
..-.++.+.+||.++.+.+.++.....-..++ +++..++++. .++.|+++|+.... .+.++. .+. ..++
T Consensus 111 ltw~~~~v~V~D~~Tl~~~~ti~~~~eGwGLt--~Dg~~L~vSd-Gs~~l~~iDp~T~~---v~~~I~V~~~g~~v~~lN 184 (268)
T 3nok_A 111 LTWTEGLLFTWSGMPPQRERTTRYSGEGWGLC--YWNGKLVRSD-GGTMLTFHEPDGFA---LVGAVQVKLRGQPVELIN 184 (268)
T ss_dssp EESSSCEEEEEETTTTEEEEEEECSSCCCCEE--EETTEEEEEC-SSSEEEEECTTTCC---EEEEEECEETTEECCCEE
T ss_pred EEccCCEEEEEECCcCcEEEEEeCCCceeEEe--cCCCEEEEEC-CCCEEEEEcCCCCe---EEEEEEeCCCCccccccc
Confidence 45567889999999999888876543323333 3455555554 58999999987432 222222 222 2345
Q ss_pred EEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecC-----------C-C-CeEEEEeecC-CC-EEEEc
Q 036314 277 ACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDS-----------H-K-DKVLCADWWR-GD-SVISG 332 (347)
Q Consensus 277 ~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~-----------h-~-~~v~~~~~~~-~~-~l~s~ 332 (347)
.+.|. ++ .+.|..-.+..|.+.|.++++.+..+.- + . +...+++|.+ ++ .++||
T Consensus 185 eLe~~-dG-~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 185 ELECA-NG-VIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp EEEEE-TT-EEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred ccEEe-CC-EEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 66776 55 4455555678999999999988776531 1 2 2446899975 33 46664
No 240
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.27 E-value=6e-05 Score=63.02 Aligned_cols=185 Identities=8% Similarity=0.004 Sum_probs=109.8
Q ss_pred CCceeeccCCCCCEEEEEecCCeEEEEcCC-CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEecccccc
Q 036314 24 DDWVSAVDGSNPGFILTGCYDNLGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEEL 102 (347)
Q Consensus 24 ~~~v~~~~~~~~~~l~sg~~d~~i~iw~~~-~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~ 102 (347)
..+...+.+.++.+.++.|.+|.|+..|+. ++.++.+. ........+...++ ......-.++.+.+||.++.+.
T Consensus 54 ~~ftqGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~l--~~~~FgeGit~~g~---~Ly~ltw~~~~v~V~D~~Tl~~ 128 (268)
T 3nok_A 54 NAFTQGLVFHQGHFFESTGHQGTLRQLSLESAQPVWMER--LGNIFAEGLASDGE---RLYQLTWTEGLLFTWSGMPPQR 128 (268)
T ss_dssp TCCEEEEEEETTEEEEEETTTTEEEECCSSCSSCSEEEE--CTTCCEEEEEECSS---CEEEEESSSCEEEEEETTTTEE
T ss_pred ccccceEEEECCEEEEEcCCCCEEEEEECCCCcEEeEEC--CCCcceeEEEEeCC---EEEEEEccCCEEEEEECCcCcE
Confidence 344566777666788899999999999974 55444331 12233322333332 2334456788999999877653
Q ss_pred ccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccc
Q 036314 103 VNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTL 182 (347)
Q Consensus 103 ~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (347)
+.++.-- ..-..+ .+|++.|+.+..+++|.++|.++........ +..-
T Consensus 129 ---------~~ti~~~-~eGwGL--t~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~--------------------V~~~ 176 (268)
T 3nok_A 129 ---------ERTTRYS-GEGWGL--CYWNGKLVRSDGGTMLTFHEPDGFALVGAVQ--------------------VKLR 176 (268)
T ss_dssp ---------EEEEECS-SCCCCE--EEETTEEEEECSSSEEEEECTTTCCEEEEEE--------------------CEET
T ss_pred ---------EEEEeCC-CceeEE--ecCCCEEEEECCCCEEEEEcCCCCeEEEEEE--------------------eCCC
Confidence 2333221 111233 3567777766668899999977643211100 0000
Q ss_pred cCCccceEEEEeCCCCeEEEEecCCcEEEEECCCCceeeeeeeC--------------eeeEEEEeeCCCCcEEEEe
Q 036314 183 VGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCG--------------KALNCIDIGGEGSALIAAG 245 (347)
Q Consensus 183 ~~h~~~v~~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~la~~ 245 (347)
...-..++.+.|.++..++..-.++.|.+.|.++++.+..+... ...+.+++.+....++++|
T Consensus 177 g~~v~~lNeLe~~dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 177 GQPVELINELECANGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp TEECCCEEEEEEETTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred CcccccccccEEeCCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 00011345566666644444445788999999999887766432 2457899988878888877
No 241
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.26 E-value=0.0002 Score=60.28 Aligned_cols=198 Identities=9% Similarity=-0.014 Sum_probs=119.5
Q ss_pred CceeeccCCC-CCEEEEEec--CCeEEEEcCC-CeEEEEee-ccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccc
Q 036314 25 DWVSAVDGSN-PGFILTGCY--DNLGRVWKAG-GVCTHILE-GHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDA 99 (347)
Q Consensus 25 ~~v~~~~~~~-~~~l~sg~~--d~~i~iw~~~-~~~~~~l~-~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~ 99 (347)
.+...+.+++ +.+.++.|. ++.|++.|.. ++.++.+. +.......+++. ++ ...++.-.++.+.++|..+
T Consensus 21 ~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~---~lyv~t~~~~~v~viD~~t 95 (266)
T 2iwa_A 21 AFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NE---KLYQVVWLKNIGFIYDRRT 95 (266)
T ss_dssp CCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TT---EEEEEETTCSEEEEEETTT
T ss_pred CCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CC---EEEEEEecCCEEEEEECCC
Confidence 3456677775 445555553 5799999974 66666543 111122344443 22 3445566788999999876
Q ss_pred cccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccccccc
Q 036314 100 EELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAI 179 (347)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (347)
.+. +.++.--... ...+++||+.++.+..+++|.++|.++........ +
T Consensus 96 ~~v---------~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~--------------------V 144 (266)
T 2iwa_A 96 LSN---------IKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHN--------------------V 144 (266)
T ss_dssp TEE---------EEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEE--------------------C
T ss_pred CcE---------EEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEE--------------------E
Confidence 543 2333211011 13355678777666678899999987643211000 0
Q ss_pred ccccCCccceEEEEeCCCCeEEEEecCCcEEEEECCCCceeeeeeeC--------------eeeEEEEeeCCCCcEEEEe
Q 036314 180 STLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCG--------------KALNCIDIGGEGSALIAAG 245 (347)
Q Consensus 180 ~~~~~h~~~v~~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~la~~ 245 (347)
..-...-...+.+.|.++..++....++.|.+.|.++++.+..+... ...+.+++.+++..+++++
T Consensus 145 g~~~~p~~~~nele~~dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTg 224 (266)
T 2iwa_A 145 KYNGHRVIRLNELEYINGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTG 224 (266)
T ss_dssp EETTEECCCEEEEEEETTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEE
T ss_pred CCCCcccccceeEEEECCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEEC
Confidence 00000011245566655533344445789999999999988777542 2357899998888899999
Q ss_pred cCCCcEEEEeCCC
Q 036314 246 GSDPILRIWDPRK 258 (347)
Q Consensus 246 ~~d~~i~iwd~~~ 258 (347)
...+++...++..
T Consensus 225 k~~~~v~~i~l~~ 237 (266)
T 2iwa_A 225 KLWPKLFEIKLHL 237 (266)
T ss_dssp TTCSEEEEEEEEE
T ss_pred CCCCeEEEEEEec
Confidence 9999999998753
No 242
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.25 E-value=0.00035 Score=58.34 Aligned_cols=176 Identities=14% Similarity=0.160 Sum_probs=106.4
Q ss_pred eEEEEEeCCCCEEEEeeCCC--cEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCcc-ceEEEEeCCCC
Q 036314 122 VHSIAAETSGNMVCSGSWDC--TISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQ-CVSSVVWPQQE 198 (347)
Q Consensus 122 V~~v~~s~~~~~l~sgs~Dg--~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~ 198 (347)
...+.|+ ++.+..|.+.+| .|+++|+.+++... .+.-... .-..++. .++
T Consensus 45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~-------------------------~~~l~~~~FgeGit~-~g~ 97 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQ-------------------------QIELGKRYFGEGISD-WKD 97 (262)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEE-------------------------EEECCTTCCEEEEEE-ETT
T ss_pred cceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEE-------------------------EEecCCccceeEEEE-eCC
Confidence 4778888 677777888876 89999988754211 1110000 1122332 344
Q ss_pred eEEEEe-cCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecC--CC---
Q 036314 199 TIYSAS-WDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSS--HN--- 272 (347)
Q Consensus 199 ~l~s~s-~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~--h~--- 272 (347)
.|+... .++.+.+||.++.+.+.++.....-..++ +++..++++- .++.|.++|+.... ...++.- ..
T Consensus 98 ~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~eG~glt--~dg~~L~~Sd-Gs~~i~~iDp~T~~---v~~~I~V~~~g~~~ 171 (262)
T 3nol_A 98 KIVGLTWKNGLGFVWNIRNLRQVRSFNYDGEGWGLT--HNDQYLIMSD-GTPVLRFLDPESLT---PVRTITVTAHGEEL 171 (262)
T ss_dssp EEEEEESSSSEEEEEETTTCCEEEEEECSSCCCCEE--ECSSCEEECC-SSSEEEEECTTTCS---EEEEEECEETTEEC
T ss_pred EEEEEEeeCCEEEEEECccCcEEEEEECCCCceEEe--cCCCEEEEEC-CCCeEEEEcCCCCe---EEEEEEeccCCccc
Confidence 554444 47889999999999888877543222333 3555565554 47889999987432 2222221 11
Q ss_pred CCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCC------------CCeEEEEeecC-CCE-EEEc
Q 036314 273 SWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSH------------KDKVLCADWWR-GDS-VISG 332 (347)
Q Consensus 273 ~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h------------~~~v~~~~~~~-~~~-l~s~ 332 (347)
..++.+.|. ++ .+.+..-.+..|.+.|.++++.+..+.-. .+...+++|.| +++ +++|
T Consensus 172 ~~lNELe~~-~G-~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 172 PELNELEWV-DG-EIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp CCEEEEEEE-TT-EEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred cccceeEEE-CC-EEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 334556775 55 44555556889999999999887765321 12446899976 444 5554
No 243
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.24 E-value=0.0019 Score=58.27 Aligned_cols=216 Identities=12% Similarity=0.032 Sum_probs=121.8
Q ss_pred EEEEEecCCeEEEEcCC-C----eEEEEee------ccC-CceEEEEEeecCCCceEEEEEccCC------CcEEEEecc
Q 036314 37 FILTGCYDNLGRVWKAG-G----VCTHILE------GHC-GAVSSVNIIKSDGLKYVTVATASKD------QTLRLWKFD 98 (347)
Q Consensus 37 ~l~sg~~d~~i~iw~~~-~----~~~~~l~------~h~-~~V~~v~~~~~~~~~~~~l~s~s~D------g~v~~wd~~ 98 (347)
++++|..+++|.+.|.. . +..+++. ... ..-..+.+.|++ .++++..+ |.|.+.|..
T Consensus 98 l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-----i~Vs~~g~~~g~~~g~v~vlD~~ 172 (462)
T 2ece_A 98 LIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-----IYISALGNEEGEGPGGILMLDHY 172 (462)
T ss_dssp EEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-----EEEEEEEETTSCSCCEEEEECTT
T ss_pred EEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-----EEEEcCCCcCCCCCCeEEEEECC
Confidence 56677788999999973 2 3445552 111 122345566632 34455554 789999987
Q ss_pred ccccccCccccceeeeee--ccc-cceEEEEEeCCCCEEEEee-------------------CCCcEEEEecCCCCCCCc
Q 036314 99 AEELVNHPKKIRSFKILR--GHK-ASVHSIAAETSGNMVCSGS-------------------WDCTISLWRTNDSDAAGN 156 (347)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~--~h~-~~V~~v~~s~~~~~l~sgs-------------------~Dg~I~iwd~~~~~~~~~ 156 (347)
+.+.+ .++. ... .--..+.|+|+++.+++.. .+.+|.+||+.+...
T Consensus 173 T~~v~---------~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~--- 240 (462)
T 2ece_A 173 SFEPL---------GKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKR--- 240 (462)
T ss_dssp TCCEE---------EECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEE---
T ss_pred CCeEE---------EEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcE---
Confidence 66543 2222 111 1123467899999999885 378999999875311
Q ss_pred cceeeeccCCCccccccccccccccccC--CccceEEEEe---CCCCeEEEEe------cCCcEEEEECCCCcee--ee-
Q 036314 157 QVSIKKRKGNNQVEEPQLEGEAISTLVG--HTQCVSSVVW---PQQETIYSAS------WDHSVRTWDVEMGKDL--SD- 222 (347)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~~~~---~~~~~l~s~s------~dg~v~vwd~~~~~~~--~~- 222 (347)
++++.- .......+.| |++++++.+. .+++|.+|....+... ..
T Consensus 241 ----------------------~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vI 298 (462)
T 2ece_A 241 ----------------------IHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVI 298 (462)
T ss_dssp ----------------------EEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEE
T ss_pred ----------------------eeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEE
Confidence 111111 0011222322 5667665555 5667876554333210 00
Q ss_pred -eee-----------------CeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCC------------
Q 036314 223 -IFC-----------------GKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHN------------ 272 (347)
Q Consensus 223 -~~~-----------------~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~------------ 272 (347)
+.. ......+.+++++..+.++.-..+.|.+||+..+...+.+..+.-..
T Consensus 299 di~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~ 378 (462)
T 2ece_A 299 EIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHK 378 (462)
T ss_dssp EECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCC
T ss_pred eCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeecccccccccc
Confidence 000 12345677888877777777778999999986443333333332210
Q ss_pred --CCeeEEEeCCCCCeEEEEE
Q 036314 273 --SWISACKWHNKSWFHLISA 291 (347)
Q Consensus 273 --~~v~~v~~s~~~~~~l~s~ 291 (347)
.+-..+.++|||.+++++-
T Consensus 379 ~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 379 LTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CCSCCCCEEECTTSSEEEEEC
T ss_pred CCCCCCEEEEcCCCCEEEEEc
Confidence 1246789999998755554
No 244
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.17 E-value=0.0003 Score=58.78 Aligned_cols=185 Identities=13% Similarity=0.056 Sum_probs=109.4
Q ss_pred CCceeeccCCCCCEEEEEecCC--eEEEEcCC-CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEecccc
Q 036314 24 DDWVSAVDGSNPGFILTGCYDN--LGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAE 100 (347)
Q Consensus 24 ~~~v~~~~~~~~~~l~sg~~d~--~i~iw~~~-~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~ 100 (347)
..+...+.|+++.+.++.|.+| .|+..|+. ++.++.+.-.. ......+...++ ......-.++.+.+||.++.
T Consensus 42 ~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~g~---~ly~ltw~~~~v~v~D~~t~ 117 (262)
T 3nol_A 42 KAFTEGFFYRNGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISDWKD---KIVGLTWKNGLGFVWNIRNL 117 (262)
T ss_dssp TCEEEEEEEETTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEEETT---EEEEEESSSSEEEEEETTTC
T ss_pred CcccceEEEECCEEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEEeCC---EEEEEEeeCCEEEEEECccC
Confidence 3445677777666778888876 89999975 66665554322 333333333332 23344556889999998765
Q ss_pred ccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccc
Q 036314 101 ELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAIS 180 (347)
Q Consensus 101 ~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (347)
+. +.++.--.. ...+.+|++.|+.+..+++|.++|.++........ +
T Consensus 118 ~~---------~~ti~~~~e---G~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~--------------------V- 164 (262)
T 3nol_A 118 RQ---------VRSFNYDGE---GWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTIT--------------------V- 164 (262)
T ss_dssp CE---------EEEEECSSC---CCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEE--------------------C-
T ss_pred cE---------EEEEECCCC---ceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEE--------------------e-
Confidence 43 233332111 12334567777666667889999877643211100 0
Q ss_pred cccCCc-cceEEEEeCCCCeEEEEecCCcEEEEECCCCceeeeeeeC-------------eeeEEEEeeCCCCcEEEEe
Q 036314 181 TLVGHT-QCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCG-------------KALNCIDIGGEGSALIAAG 245 (347)
Q Consensus 181 ~~~~h~-~~v~~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~la~~ 245 (347)
...+.. ..++.+.|.++...+..-.++.|.+.|.++++.+..+... ...+.+++.+....++++|
T Consensus 165 ~~~g~~~~~lNELe~~~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 165 TAHGEELPELNELEWVDGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp EETTEECCCEEEEEEETTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred ccCCccccccceeEEECCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 000111 2234456656544444445788999999999887766532 2357899988877777776
No 245
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.11 E-value=0.00023 Score=66.38 Aligned_cols=189 Identities=11% Similarity=0.069 Sum_probs=113.8
Q ss_pred CCCCEEEEe-eCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe---CCCCeEEEEe
Q 036314 129 TSGNMVCSG-SWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW---PQQETIYSAS 204 (347)
Q Consensus 129 ~~~~~l~sg-s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~---~~~~~l~s~s 204 (347)
+||++++.. ..+..|.+.|+.+.+... .+ .+.. ......+++ |++++++.++
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~----------------------ii-~ip~-g~~phg~~~~~~p~~~~v~~~~ 154 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDA----------------------IL-EIPN-AKGIHGLRPQKWPRSNYVFCNG 154 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEE----------------------EE-ECSS-CCSEEEEEECCSSBCSEEEEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEee----------------------EE-eCCC-CCCCcceeeeecCCCcEEEEec
Confidence 378877655 445679999987643211 00 1111 012344443 6777776663
Q ss_pred ------------------cCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCC------------------
Q 036314 205 ------------------WDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSD------------------ 248 (347)
Q Consensus 205 ------------------~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d------------------ 248 (347)
.++.+.+.|..+.+...++..+....-+++++++...++++...
T Consensus 155 ~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~ 234 (595)
T 1fwx_A 155 EDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIV 234 (595)
T ss_dssp CSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEE
T ss_pred ccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEE
Confidence 45678999999887777766533445566666555444443222
Q ss_pred -------------------CcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCc---
Q 036314 249 -------------------PILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAW--- 306 (347)
Q Consensus 249 -------------------~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~--- 306 (347)
+.|.+.|.+.......+..+.. ......+.++|||.+.++++..+.+|.++|+++.+
T Consensus 235 V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~ 313 (595)
T 1fwx_A 235 VFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVF 313 (595)
T ss_dssp EEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHH
T ss_pred EeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECccccccc
Confidence 2466777654111111223322 12345689999999888888899999999998642
Q ss_pred ---------cceeecCCCCeEEEEeecC-CCEEEEccCCceEEEeec
Q 036314 307 ---------PLSVIDSHKDKVLCADWWR-GDSVISGGVDSKLCVSSG 343 (347)
Q Consensus 307 ---------~~~~~~~h~~~v~~~~~~~-~~~l~s~s~D~~v~vw~~ 343 (347)
......- ....+-++|++ |...++.-.|+.|.+|+.
T Consensus 314 ~~~l~~~~~v~~~v~v-G~gP~h~aF~~dG~aY~t~~ldsqV~kwdi 359 (595)
T 1fwx_A 314 YENADPRSAVVAEPEL-GLGPLHTAFDGRGNAYTSLFLDSQVVKWNI 359 (595)
T ss_dssp HSCCCGGGGEEECCBC-CSCEEEEEECTTSEEEEEETTTTEEEEEEH
T ss_pred ccccCcccceEEEcCC-CCCcceEEECCCCeEEEEEecCCcEEEEEh
Confidence 1222322 13467889975 644667778999999984
No 246
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.10 E-value=0.00062 Score=65.58 Aligned_cols=291 Identities=14% Similarity=0.128 Sum_probs=144.9
Q ss_pred CCEEEEEecCCeEEEEcC-CCeEEEEeeccCCc----------e-EEEEEeecCCCceEEEEEccCCCcEEEEecccccc
Q 036314 35 PGFILTGCYDNLGRVWKA-GGVCTHILEGHCGA----------V-SSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEEL 102 (347)
Q Consensus 35 ~~~l~sg~~d~~i~iw~~-~~~~~~~l~~h~~~----------V-~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~ 102 (347)
++.|..++.++.+..+|. +|+.+..+...... + ..+.+. + ..|+.++.|+.|..+|..+++.
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~v~v~~~dg~l~alD~~tG~~ 139 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALW--G----DKVYVGTLDGRLIALDAKTGKA 139 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEE--B----TEEEEECTTSEEEEEETTTCCE
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEEE--C----CEEEEEcCCCEEEEEECCCCCE
Confidence 567777788899999996 57776665433211 1 112222 1 1467788999999999988764
Q ss_pred ccCccccceeeeeeccccceEEEEEeCCCCEEEEeeC------CCcEEEEecCCCCCCCccceeeeccCCCcc--c----
Q 036314 103 VNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSW------DCTISLWRTNDSDAAGNQVSIKKRKGNNQV--E---- 170 (347)
Q Consensus 103 ~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~------Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~--~---- 170 (347)
+=................++ + .++ .++.+.. ++.|..+|..+++....... ....... .
T Consensus 140 ~W~~~~~~~~~~~~~~~~P~--v---~~~-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~---~~~~p~~~~~~~~~ 210 (668)
T 1kv9_A 140 IWSQQTTDPAKPYSITGAPR--V---VKG-KVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYT---VPGDPALPYEHPEL 210 (668)
T ss_dssp EEEEECSCTTSSCBCCSCCE--E---ETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEES---SCCCTTSCCSSHHH
T ss_pred eeeeccCCCCCcceecCCCE--E---ECC-EEEEeCCCCCcCCCCEEEEEECCCCcEEEEecc---cCCCCCcccccccc
Confidence 31100000000000011121 1 134 4444432 58899999887653211100 0000000 0
Q ss_pred ---cccccccccccccCCccceEEEEe-CCCCeEEEEecCC-------------------cEEEEECCCCceeeeeeeC-
Q 036314 171 ---EPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDH-------------------SVRTWDVEMGKDLSDIFCG- 226 (347)
Q Consensus 171 ---~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg-------------------~v~vwd~~~~~~~~~~~~~- 226 (347)
.....+..+....++......+++ +..+.++.++.++ .|..+|.++++.+=..+..
T Consensus 211 ~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~ 290 (668)
T 1kv9_A 211 REAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTP 290 (668)
T ss_dssp HHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESST
T ss_pred ccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCC
Confidence 000000000000011111122344 4556777776665 3899999999876444321
Q ss_pred ---------eeeEEEEeeCCCC--cEEEEecCCCcEEEEeCCCCCCCCCeEEecCCC-CC--------------------
Q 036314 227 ---------KALNCIDIGGEGS--ALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHN-SW-------------------- 274 (347)
Q Consensus 227 ---------~~~~~~~~~~~~~--~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~-~~-------------------- 274 (347)
.+....++..++. ..++.++.+|.++++|.+..+. +....... .+
T Consensus 291 ~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~---l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~ 367 (668)
T 1kv9_A 291 GDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKL---ISAEKFGKVTWAEKVDLATGRPVEAPGVRYE 367 (668)
T ss_dssp TCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE---EEEEESSCCCSEEEECTTTCCEEECTTTTCS
T ss_pred CccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCE---eccccccccccccccccccCCcccccccccc
Confidence 1222222211221 2577888999999999765321 11100000 00
Q ss_pred ---------------eeEEEeCCCCCeEEEE-----------------------------------EeCCCcEEEEEcCC
Q 036314 275 ---------------ISACKWHNKSWFHLIS-----------------------------------ASYDGKVMLWDLRT 304 (347)
Q Consensus 275 ---------------v~~v~~s~~~~~~l~s-----------------------------------~s~D~~i~lwd~~~ 304 (347)
-..++++|+...+.+. ...+|.|..||+++
T Consensus 368 ~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~t 447 (668)
T 1kv9_A 368 KEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVK 447 (668)
T ss_dssp SSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTT
T ss_pred CCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCC
Confidence 0125666765543321 12348899999999
Q ss_pred CccceeecCCCCeEEEEee-cCCCEEEEccCCceEEEeecc
Q 036314 305 AWPLSVIDSHKDKVLCADW-WRGDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 305 ~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~D~~v~vw~~~ 344 (347)
++.+-.+..+. ....... -.+..+..++.|+.|++|+..
T Consensus 448 G~~~W~~~~~~-~~~~~~~~t~gg~vf~g~~dg~l~a~d~~ 487 (668)
T 1kv9_A 448 QKAAWKVPYPT-HWNGGTLSTAGNLVFQGTAAGQMHAYSAD 487 (668)
T ss_dssp TEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETT
T ss_pred CcEEEEccCCC-CCcCceeEeCCCEEEEECCcccchhhhhh
Confidence 87654443222 2222222 246788888999999999753
No 247
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.09 E-value=0.0003 Score=65.61 Aligned_cols=96 Identities=15% Similarity=0.133 Sum_probs=69.7
Q ss_pred CcEEEEECCC--Cce-eeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCC-----CC----CCeEEecCCCCC
Q 036314 207 HSVRTWDVEM--GKD-LSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPG-----TS----APVFQFSSHNSW 274 (347)
Q Consensus 207 g~v~vwd~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~-----~~----~~~~~~~~h~~~ 274 (347)
+.|.+.|.++ ++. +..+..+....++.++|++..+++++..+++|.++|..... .. ....++. -...
T Consensus 254 ~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~g 332 (595)
T 1fwx_A 254 NGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLG 332 (595)
T ss_dssp TTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCSC
T ss_pred CcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC-CCCC
Confidence 4699999987 555 55666666677889988888888888899999999987321 00 0112222 2234
Q ss_pred eeEEEeCCCCCeEEEEEeCCCcEEEEEcCC
Q 036314 275 ISACKWHNKSWFHLISASYDGKVMLWDLRT 304 (347)
Q Consensus 275 v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~ 304 (347)
-.-++|+|+| +..++.-.|++|-+||+.+
T Consensus 333 P~h~aF~~dG-~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 333 PLHTAFDGRG-NAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp EEEEEECTTS-EEEEEETTTTEEEEEEHHH
T ss_pred cceEEECCCC-eEEEEEecCCcEEEEEhhH
Confidence 5678999999 6666777899999999977
No 248
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.06 E-value=0.0046 Score=53.56 Aligned_cols=133 Identities=12% Similarity=-0.014 Sum_probs=77.4
Q ss_pred CcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCe
Q 036314 207 HSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWF 286 (347)
Q Consensus 207 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~ 286 (347)
+.|..||..+++.............+++++++..++++-...+.|..||+.... ......+..... ...+++.++|..
T Consensus 165 g~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~-~~~~~~~~~~~g-P~gi~~d~~G~l 242 (322)
T 2fp8_A 165 GRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPK-KGTAEVLVKIPN-PGNIKRNADGHF 242 (322)
T ss_dssp EEEEEEETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTT-TTCEEEEEECSS-EEEEEECTTSCE
T ss_pred ceEEEEeCCCCEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCc-CCccceEEeCCC-CCCeEECCCCCE
Confidence 668888876654322111112345678876655466665667899999986421 111222211122 667889998864
Q ss_pred EEEEEeC----------CCcEEEEEcCCCccceeecCCC----CeEEEEeecCCCEEEEccCCceEEEeec
Q 036314 287 HLISASY----------DGKVMLWDLRTAWPLSVIDSHK----DKVLCADWWRGDSVISGGVDSKLCVSSG 343 (347)
Q Consensus 287 ~l~s~s~----------D~~i~lwd~~~~~~~~~~~~h~----~~v~~~~~~~~~~l~s~s~D~~v~vw~~ 343 (347)
.++... .+.|..+|.+ ++.+..+.... ..+.++.+..+..+++....+.|.+++-
T Consensus 243 -~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~ 311 (322)
T 2fp8_A 243 -WVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLFHGSVGILVY 311 (322)
T ss_dssp -EEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEEETTEEEEECSSCSEEEEEEC
T ss_pred -EEEecCcccccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEEeCCEEEEeecCCCceEEEec
Confidence 443333 4668888875 56555554322 3456666666666667667777877653
No 249
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.06 E-value=0.0044 Score=55.39 Aligned_cols=216 Identities=7% Similarity=-0.002 Sum_probs=121.9
Q ss_pred CCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCC-CEEEEeeCCCcEEEEecCCCCCCCccceeeeccCC
Q 036314 88 KDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSG-NMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGN 166 (347)
Q Consensus 88 ~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~-~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~ 166 (347)
....|+..++...+. ...+. .......++|++.+ .++++-...+.|..++....... .
T Consensus 94 ~~~~I~~i~~~~~~~---------~~~~~-~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~----~------- 152 (386)
T 3v65_B 94 NRIDIRQVLPHRSEY---------TLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVE----E------- 152 (386)
T ss_dssp CBSCEEEECTTSCCC---------EEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEE----E-------
T ss_pred cCccceeeccCCCcE---------EEEec-CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcE----E-------
Confidence 335688888765431 11122 23446789999754 55566667788888887542100 0
Q ss_pred CccccccccccccccccCCccceEEEEeC-CCCeE-EEEecCCcEEEEECCCCceeeeeee-C-eeeEEEEeeCCCCcEE
Q 036314 167 NQVEEPQLEGEAISTLVGHTQCVSSVVWP-QQETI-YSASWDHSVRTWDVEMGKDLSDIFC-G-KALNCIDIGGEGSALI 242 (347)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~l-~s~s~dg~v~vwd~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~l 242 (347)
.+.........+++. .++.| ++-...+.|.+.++.... ...+.. . .....+++.+.++.++
T Consensus 153 --------------~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~-~~~l~~~~l~~P~giavdp~~g~ly 217 (386)
T 3v65_B 153 --------------VVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH-RKVLLWQSLEKPRAIALHPMEGTIY 217 (386)
T ss_dssp --------------EECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCS-CEEEECSSCSCEEEEEEETTTTEEE
T ss_pred --------------EEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCc-eEEeecCCCCCCcEEEEEcCCCeEE
Confidence 000000111234442 34444 444556778888875433 222221 1 3457788887777776
Q ss_pred EEecCC-CcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEE
Q 036314 243 AAGGSD-PILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCA 321 (347)
Q Consensus 243 a~~~~d-~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~ 321 (347)
.+-... +.|..+++.... ..........+-..++++|++.++.++-+..+.|..+|++.......+........++
T Consensus 218 ~td~~~~~~I~r~~~dG~~---~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~gi 294 (386)
T 3v65_B 218 WTDWGNTPRIEASSMDGSG---RRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAI 294 (386)
T ss_dssp EEECSSSCEEEEEETTSCS---CEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEE
T ss_pred EeccCCCCEEEEEeCCCCC---cEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEE
Confidence 665555 789888876321 1222233344578899998877767776778899999987543222233223445666
Q ss_pred eecCCCEEEEccCCceEEEee
Q 036314 322 DWWRGDSVISGGVDSKLCVSS 342 (347)
Q Consensus 322 ~~~~~~~l~s~s~D~~v~vw~ 342 (347)
++..+..+++-...+.|...+
T Consensus 295 av~~~~ly~td~~~~~V~~~~ 315 (386)
T 3v65_B 295 TVFEDSLYWTDWHTKSINSAN 315 (386)
T ss_dssp EEETTEEEEEETTTTEEEEEE
T ss_pred EEECCEEEEeeCCCCeEEEEE
Confidence 664455566655666665554
No 250
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.02 E-value=0.0015 Score=54.03 Aligned_cols=184 Identities=11% Similarity=0.043 Sum_probs=107.5
Q ss_pred CceeeccCCCCCEEEEEecCC--eEEEEcCC-CeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccc
Q 036314 25 DWVSAVDGSNPGFILTGCYDN--LGRVWKAG-GVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEE 101 (347)
Q Consensus 25 ~~v~~~~~~~~~~l~sg~~d~--~i~iw~~~-~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~ 101 (347)
.+.-.+.|.++.+..|.|.+| .|+..|+. ++.++...-... .....+...++ +.......++.+.+||.++.+
T Consensus 21 ~ftqGL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~-~fgeGi~~~~~---~ly~ltw~~~~v~v~D~~tl~ 96 (243)
T 3mbr_X 21 AFTEGLFYLRGHLYESTGETGRSSVRKVDLETGRILQRAEVPPP-YFGAGIVAWRD---RLIQLTWRNHEGFVYDLATLT 96 (243)
T ss_dssp CCEEEEEEETTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTT-CCEEEEEEETT---EEEEEESSSSEEEEEETTTTE
T ss_pred cccccEEEECCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCC-cceeEEEEeCC---EEEEEEeeCCEEEEEECCcCc
Confidence 455567777766777888765 89999974 666555442222 23332233232 234445678899999987654
Q ss_pred cccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccccccccc
Q 036314 102 LVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAIST 181 (347)
Q Consensus 102 ~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (347)
. +.++..-..+ ..+ .++++.|+.+..+++|.++|.++........ +.
T Consensus 97 ~---------~~ti~~~~~G-wgl--t~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~--------------------V~- 143 (243)
T 3mbr_X 97 P---------RARFRYPGEG-WAL--TSDDSHLYMSDGTAVIRKLDPDTLQQVGSIK--------------------VT- 143 (243)
T ss_dssp E---------EEEEECSSCC-CEE--EECSSCEEEECSSSEEEEECTTTCCEEEEEE--------------------CE-
T ss_pred E---------EEEEeCCCCc-eEE--eeCCCEEEEECCCCeEEEEeCCCCeEEEEEE--------------------Ec-
Confidence 3 3333321222 233 3566666655568899999987643211100 00
Q ss_pred ccC-CccceEEEEeCCCCeEEEEecCCcEEEEECCCCceeeeeeeC--------------eeeEEEEeeCCCCcEEEEe
Q 036314 182 LVG-HTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCG--------------KALNCIDIGGEGSALIAAG 245 (347)
Q Consensus 182 ~~~-h~~~v~~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~la~~ 245 (347)
..+ .-..++.+.|.+++.++..-.+..|.+.|.++++.+..+... ...+.+++.+....++++|
T Consensus 144 ~~g~~~~~lNeLe~~~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 144 AGGRPLDNLNELEWVNGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp ETTEECCCEEEEEEETTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred cCCcccccceeeEEeCCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 000 002234555555554444445778999999999887666421 2457899988777788777
No 251
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.00 E-value=0.0032 Score=60.49 Aligned_cols=270 Identities=12% Similarity=0.119 Sum_probs=127.5
Q ss_pred CCCEEEEEecCC-----------eEEEEcCC-CeEE--EEee-ccCCceEEEEEeecCCCceEEEEEcc-CCCcEEEEec
Q 036314 34 NPGFILTGCYDN-----------LGRVWKAG-GVCT--HILE-GHCGAVSSVNIIKSDGLKYVTVATAS-KDQTLRLWKF 97 (347)
Q Consensus 34 ~~~~l~sg~~d~-----------~i~iw~~~-~~~~--~~l~-~h~~~V~~v~~~~~~~~~~~~l~s~s-~Dg~v~~wd~ 97 (347)
++.+++.||.+. .+.+||+. +... ..+. .+.....++++..++ ..++.|+ .+..+.+||.
T Consensus 197 ~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g----~lyv~GG~~~~~v~~yd~ 272 (656)
T 1k3i_A 197 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNG----QIVVTGGNDAKKTSLYDS 272 (656)
T ss_dssp TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTS----CEEEECSSSTTCEEEEEG
T ss_pred CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCC----CEEEeCCCCCCceEEecC
Confidence 566888888653 57889874 3221 2222 222222344554422 3567777 4568999998
Q ss_pred cccccccCccccceeeeeeccccceEEEEEeCCCCEEEEee-CC-----CcEEEEecCCCCCCCccceeeeccCCCcccc
Q 036314 98 DAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGS-WD-----CTISLWRTNDSDAAGNQVSIKKRKGNNQVEE 171 (347)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs-~D-----g~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 171 (347)
.+++-. .+..+.. ...-.+++..+++++++.|+ .+ ..+.+||..+... ........ .
T Consensus 273 ~t~~W~-------~~~~~~~-~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W-------~~~~~~~~--~ 335 (656)
T 1k3i_A 273 SSDSWI-------PGPDMQV-ARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTW-------TSLPNAKV--N 335 (656)
T ss_dssp GGTEEE-------ECCCCSS-CCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEE-------EEETTSCS--G
T ss_pred cCCcee-------ECCCCCc-cccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcc-------eeCCCccc--c
Confidence 765321 1111111 11112345557899888888 44 5688898765321 00000000 0
Q ss_pred ccccccccccccCCccceEEEEeCCCCeEEEEecCCcEEEEECCCCceeeeeeeCe----------eeEEEEeeCCCCcE
Q 036314 172 PQLEGEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIFCGK----------ALNCIDIGGEGSAL 241 (347)
Q Consensus 172 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~ 241 (347)
+....... ....+...+..+...++..+ .......+..||..+........... .-.++.+...++.+
T Consensus 336 p~~~~~~~-~~~~~~~~iyv~Gg~~g~~~-~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i 413 (656)
T 1k3i_A 336 PMLTADKQ-GLYRSDNHAWLFGWKKGSVF-QAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKI 413 (656)
T ss_dssp GGCCCCTT-GGGTTTCSCCEEECGGGCEE-ECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEE
T ss_pred cccccccc-ceeecCCceEEEECCCCcEE-EecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeE
Confidence 00000000 00001112222222222222 22234467889988765443222111 11233333345678
Q ss_pred EEEecCCC-----------cEEEEeCCCCCCCCCeEEec---CCCCC-eeEEEeCCCCCeEEEEEeCC-----------C
Q 036314 242 IAAGGSDP-----------ILRIWDPRKPGTSAPVFQFS---SHNSW-ISACKWHNKSWFHLISASYD-----------G 295 (347)
Q Consensus 242 la~~~~d~-----------~i~iwd~~~~~~~~~~~~~~---~h~~~-v~~v~~s~~~~~~l~s~s~D-----------~ 295 (347)
++.|+.++ .+.+||+.... ...+. .+..+ -.++...|++. +++.|+.+ .
T Consensus 414 ~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~----W~~~~~~~mp~~R~~~~~~~l~~g~-i~v~GG~~~~~~~~~~~~~~ 488 (656)
T 1k3i_A 414 LTFGGSPDYQDSDATTNAHIITLGEPGTSP----NTVFASNGLYFARTFHTSVVLPDGS-TFITGGQRRGIPFEDSTPVF 488 (656)
T ss_dssp EEECCBSSSSSSBCCCCEEEEECCSTTSCC----EEEECTTCCSSCCBSCEEEECTTSC-EEEECCBSBCCTTCCCSBCC
T ss_pred EEEeCCCCCCCCCcCCcceEEEcCCCCCCC----eeEEccCCCCCCcccCCeEECCCCC-EEEECCcccCcCcCCCCccc
Confidence 88887532 67788875321 12211 12222 23344556774 57777654 5
Q ss_pred cEEEEEcCCCcc--ceee----cCCCCeEEEEeecCCCEEEEccC
Q 036314 296 KVMLWDLRTAWP--LSVI----DSHKDKVLCADWWRGDSVISGGV 334 (347)
Q Consensus 296 ~i~lwd~~~~~~--~~~~----~~h~~~v~~~~~~~~~~l~s~s~ 334 (347)
.+.+||.++.+- +..+ .+|. .++...+|+.++.||.
T Consensus 489 ~v~~ydp~t~~W~~~~~~~~~R~~hs---~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 489 TPEIYVPEQDTFYKQNPNSIVRVYHS---ISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CCEEEEGGGTEEEECCCCSSCCCTTE---EEEECTTSCEEEEECC
T ss_pred ceEEEcCCCCceeecCCCCCcccccc---HhhcCCCcEEEecCCC
Confidence 689999876531 1111 1232 1222246777888774
No 252
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.00 E-value=0.015 Score=57.11 Aligned_cols=281 Identities=12% Similarity=0.075 Sum_probs=149.0
Q ss_pred CCceeeccCCCCCEEEEEecCCeEEEEcCCC-eEEEEeecc-------CCceEEEEEeecCCCceEEEEEccCCCcEEEE
Q 036314 24 DDWVSAVDGSNPGFILTGCYDNLGRVWKAGG-VCTHILEGH-------CGAVSSVNIIKSDGLKYVTVATASKDQTLRLW 95 (347)
Q Consensus 24 ~~~v~~~~~~~~~~l~sg~~d~~i~iw~~~~-~~~~~l~~h-------~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~w 95 (347)
...|.++....++.|-.|..++-+..||... ........+ ...|.++...+++. |..|+.+ -|.+|
T Consensus 214 ~~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-----lWigt~~-Gl~~~ 287 (795)
T 4a2l_A 214 TKQIQAILQQSPTRIWVATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNR-----LWIGTFN-DLNIY 287 (795)
T ss_dssp CCCEEEEEEEETTEEEEEEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSC-----EEEEESS-CEEEE
T ss_pred CCeeEEEEEcCCCCEEEEECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCC-----EEEEeCC-hhheE
Confidence 4567777654344444454443477788654 333322221 35578877655332 3344555 48888
Q ss_pred eccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccc
Q 036314 96 KFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLE 175 (347)
Q Consensus 96 d~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (347)
+...+++......... .-.-....|.++...++|.+.+ |+.++-|..|+...... ......
T Consensus 288 ~~~~~~~~~~~~~~~~--~~~l~~~~i~~i~~D~~g~lWi-gt~~~Gl~~~~~~~~~~-----~~~~~~----------- 348 (795)
T 4a2l_A 288 HEGTDSFASYSSNPVE--NGSLSQRSVRSIFMDSQGGMWL-GTYFGGLNYYHPIRNRF-----KNIRNI----------- 348 (795)
T ss_dssp ETTTTEEEEECCCTTS--TTSCSSSCEEEEEECTTSCEEE-EESSSCEEEECGGGGSS-----EEECCC-----------
T ss_pred cCCCCeEEEEecCCCC--CCCCCCCcEEEEEEeCCcCEEE-EECCCCeEEeCCCcccc-----eEEcCC-----------
Confidence 8765542110000000 0001346799999888887554 77778888887543210 000000
Q ss_pred ccccccccCCccceEEEEeCCCCeEEEEecCCcEEEEECCCCceeeeee---------eCeeeEEEEeeCCCCcEEEEec
Q 036314 176 GEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIF---------CGKALNCIDIGGEGSALIAAGG 246 (347)
Q Consensus 176 ~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~la~~~ 246 (347)
.....+ ....|.++.......|..|+.++.|..||..++....-.. ....+.++...++ +.++-.|+
T Consensus 349 -~~~~~l--~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~-g~~lWigt 424 (795)
T 4a2l_A 349 -PYKNSL--SDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEK-KSLVYIGT 424 (795)
T ss_dssp -TTSSSC--SCSSEEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETT-TTEEEEEE
T ss_pred -CCCCCC--CCCeeEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCC-CCEEEEEe
Confidence 000001 2345788876555567778888889999987654322110 1234666666544 34244566
Q ss_pred CCCcEEEEeCCCCCCCCCeEEec-----CCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeec------CCC
Q 036314 247 SDPILRIWDPRKPGTSAPVFQFS-----SHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVID------SHK 315 (347)
Q Consensus 247 ~d~~i~iwd~~~~~~~~~~~~~~-----~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~------~h~ 315 (347)
.++-|..||..... ...+. .+...|.++...+++. |..|+. +-+.+||.++++...... -+.
T Consensus 425 ~~~Gl~~~d~~~~~----~~~~~~~~~~l~~~~v~~i~~d~~g~--lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~ 497 (795)
T 4a2l_A 425 HAGGLSILHRNSGQ----VENFNQRNSQLVNENVYAILPDGEGN--LWLGTL-SALVRFNPEQRSFTTIEKEKDGTPVVS 497 (795)
T ss_dssp TTTEEEEEETTTCC----EEEECTTTSCCSCSCEEEEEECSSSC--EEEEES-SCEEEEETTTTEEEECCBCTTCCBCCC
T ss_pred CcCceeEEeCCCCc----EEEeecCCCCcCCCeeEEEEECCCCC--EEEEec-CceeEEeCCCCeEEEccccccccccCC
Confidence 66779999976321 22222 1345788998888774 444555 458889987754322111 123
Q ss_pred CeEEEEeec-CCCEEEEccCCceEEEee
Q 036314 316 DKVLCADWW-RGDSVISGGVDSKLCVSS 342 (347)
Q Consensus 316 ~~v~~~~~~-~~~~l~s~s~D~~v~vw~ 342 (347)
..|.++... +|...+ |+.+| |..++
T Consensus 498 ~~i~~i~~d~~g~lWi-gt~~G-l~~~~ 523 (795)
T 4a2l_A 498 KQITTLFRDSHKRLWI-GGEEG-LSVFK 523 (795)
T ss_dssp CCEEEEEECTTCCEEE-EESSC-EEEEE
T ss_pred ceEEEEEECCCCCEEE-EeCCc-eEEEe
Confidence 567887764 454433 33343 44443
No 253
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.99 E-value=0.016 Score=57.00 Aligned_cols=268 Identities=9% Similarity=0.025 Sum_probs=144.0
Q ss_pred cCCceeeccCCCCCEEEEEecCCeEEEEcCCCeEEEEeec-------cCCceEEEEEeecCCCceEEEEEccCCCcEEEE
Q 036314 23 HDDWVSAVDGSNPGFILTGCYDNLGRVWKAGGVCTHILEG-------HCGAVSSVNIIKSDGLKYVTVATASKDQTLRLW 95 (347)
Q Consensus 23 h~~~v~~~~~~~~~~l~sg~~d~~i~iw~~~~~~~~~l~~-------h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~w 95 (347)
....|.++.....+.|-.|..++-+..|+........+.. ....|.++...+++ .|-.|+.++-|..|
T Consensus 308 ~~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g-----~lWiGt~~~Gl~~~ 382 (795)
T 4a2l_A 308 SQRSVRSIFMDSQGGMWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDK-----NLWIGTNDGGLNLY 382 (795)
T ss_dssp SSSCEEEEEECTTSCEEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTS-----CEEEEESSSCEEEE
T ss_pred CCCcEEEEEEeCCcCEEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCC-----CEEEEECCCCeEEE
Confidence 4467888876655556667776667888754221111211 23457787665433 25557777779999
Q ss_pred eccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccc
Q 036314 96 KFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLE 175 (347)
Q Consensus 96 d~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (347)
+..+++............ ..-....|.++...++|+.|..|+.++-+.+||..+.... . ...
T Consensus 383 ~~~~~~~~~~~~~~~~~~-~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~----~-~~~------------ 444 (795)
T 4a2l_A 383 NPITQRFTSYTLQEDESA-RGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVE----N-FNQ------------ 444 (795)
T ss_dssp CTTTCCEEEECCC-------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEE----E-ECT------------
T ss_pred cCCCCcEEEEecCCCCcc-cCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEE----E-eec------------
Confidence 876543211000000000 0012356899988888884566788788999987643210 0 000
Q ss_pred ccccccccCCccceEEEEeCCCCeEEEEecCCcEEEEECCCCceeeeee-------eCeeeEEEEeeCCCCcEEEEecCC
Q 036314 176 GEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIF-------CGKALNCIDIGGEGSALIAAGGSD 248 (347)
Q Consensus 176 ~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~la~~~~d 248 (347)
. .-..+...|.++.......|..++. +.+.+||..+++...... ....+.++...+++ .+.+ |+.
T Consensus 445 -~---~~~l~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g-~lWi-gt~- 516 (795)
T 4a2l_A 445 -R---NSQLVNENVYAILPDGEGNLWLGTL-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHK-RLWI-GGE- 516 (795)
T ss_dssp -T---TSCCSCSCEEEEEECSSSCEEEEES-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTC-CEEE-EES-
T ss_pred -C---CCCcCCCeeEEEEECCCCCEEEEec-CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCC-CEEE-EeC-
Confidence 0 0001234577777644444555555 458889987654322111 11346666665544 3433 333
Q ss_pred CcEEEEeCCCCCCCCCeEEec-------CCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeec---CC-CCe
Q 036314 249 PILRIWDPRKPGTSAPVFQFS-------SHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVID---SH-KDK 317 (347)
Q Consensus 249 ~~i~iwd~~~~~~~~~~~~~~-------~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~---~h-~~~ 317 (347)
+-+..||..... . .+. .....|.++...+++. |..|+.+ -+..||..+++. ..+. +- .+.
T Consensus 517 ~Gl~~~~~~~~~----~-~~~~~~~~~~l~~~~i~~i~~d~~g~--lWigT~~-Gl~~~d~~~~~~-~~~~~~~gl~~~~ 587 (795)
T 4a2l_A 517 EGLSVFKQEGLD----I-QKASILPVSNVTKLFTNCIYEASNGI--IWVGTRE-GFYCFNEKDKQI-KRYNTTNGLPNNV 587 (795)
T ss_dssp SCEEEEEEETTE----E-EECCCSCSCGGGGSCEEEEEECTTSC--EEEEESS-CEEEEETTTTEE-EEECGGGTCSCSC
T ss_pred CceEEEeCCCCe----E-EEecCCCCCCCCCCeeEEEEECCCCC--EEEEeCC-CceeECCCCCcE-EEeCCCCCCchhh
Confidence 458888865321 1 211 2345788998888875 4444444 577899876532 2221 11 245
Q ss_pred EEEEeec-CCCEEE
Q 036314 318 VLCADWW-RGDSVI 330 (347)
Q Consensus 318 v~~~~~~-~~~~l~ 330 (347)
|.++... .|...+
T Consensus 588 i~~i~~d~~g~lWi 601 (795)
T 4a2l_A 588 VYGILEDSFGRLWL 601 (795)
T ss_dssp EEEEEECTTSCEEE
T ss_pred eEEEEECCCCCEEE
Confidence 7777664 454433
No 254
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.98 E-value=0.0067 Score=52.51 Aligned_cols=232 Identities=9% Similarity=0.065 Sum_probs=121.7
Q ss_pred eeccCC-CCCEEEEEecCCeEEEEcCCCeEEEEeec--------------------cCCceEEEEEeecCCCceEEEEEc
Q 036314 28 SAVDGS-NPGFILTGCYDNLGRVWKAGGVCTHILEG--------------------HCGAVSSVNIIKSDGLKYVTVATA 86 (347)
Q Consensus 28 ~~~~~~-~~~~l~sg~~d~~i~iw~~~~~~~~~l~~--------------------h~~~V~~v~~~~~~~~~~~~l~s~ 86 (347)
..+++. ++.++.++..++.|..|+..+.....+.. ....+..+++.+.++ .|..+
T Consensus 22 ~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g----~l~v~ 97 (322)
T 2fp8_A 22 NSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNN----QLYIV 97 (322)
T ss_dssp CCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTT----EEEEE
T ss_pred eEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCC----cEEEE
Confidence 334554 45567888889999999876532332221 113467888875222 24444
Q ss_pred cCCCcEEEEeccccccccCccccceee-eeec-cccceEEEEEeC-CCCEEEEeeC-----------------CCcEEEE
Q 036314 87 SKDQTLRLWKFDAEELVNHPKKIRSFK-ILRG-HKASVHSIAAET-SGNMVCSGSW-----------------DCTISLW 146 (347)
Q Consensus 87 s~Dg~v~~wd~~~~~~~~~~~~~~~~~-~~~~-h~~~V~~v~~s~-~~~~l~sgs~-----------------Dg~I~iw 146 (347)
...+.|..+|..+++.. .+. ...+ .......+++.+ +|++.++-.. ++.|..|
T Consensus 98 d~~~~i~~~d~~~g~~~-------~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~ 170 (322)
T 2fp8_A 98 DCYYHLSVVGSEGGHAT-------QLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKY 170 (322)
T ss_dssp ETTTEEEEECTTCEECE-------EEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEE
T ss_pred ECCCCEEEEeCCCCEEE-------EecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEE
Confidence 44455888887654311 111 0111 112467889999 8887776432 2456666
Q ss_pred ecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeC-CCCeEEEE-ecCCcEEEEECCCCc--eeee
Q 036314 147 RTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP-QQETIYSA-SWDHSVRTWDVEMGK--DLSD 222 (347)
Q Consensus 147 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~l~s~-s~dg~v~vwd~~~~~--~~~~ 222 (347)
|..+... ..+...-.....+++. +++.|+.+ +.++.|.+|++.... ....
T Consensus 171 d~~~~~~--------------------------~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~ 224 (322)
T 2fp8_A 171 DPSTKET--------------------------TLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEV 224 (322)
T ss_dssp ETTTTEE--------------------------EEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEE
T ss_pred eCCCCEE--------------------------EEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccce
Confidence 5432210 0000000122456664 56655544 556889999987431 1111
Q ss_pred ee-eCeeeEEEEeeCCCCcEEEEecC----------CCcEEEEeCCCCCCCCCeEEecCC----CCCeeEEEeCCCCCeE
Q 036314 223 IF-CGKALNCIDIGGEGSALIAAGGS----------DPILRIWDPRKPGTSAPVFQFSSH----NSWISACKWHNKSWFH 287 (347)
Q Consensus 223 ~~-~~~~~~~~~~~~~~~~~la~~~~----------d~~i~iwd~~~~~~~~~~~~~~~h----~~~v~~v~~s~~~~~~ 287 (347)
+. ... ...+++.+++ ++.++... .+.|..+|.. +. .+..+... ...+..+.+. ++ ++
T Consensus 225 ~~~~~g-P~gi~~d~~G-~l~va~~~~~~~~~~~~~~~~v~~~d~~--G~--~~~~~~~~~g~~~~~~~~~~~~-~g-~L 296 (322)
T 2fp8_A 225 LVKIPN-PGNIKRNADG-HFWVSSSEELDGNMHGRVDPKGIKFDEF--GN--ILEVIPLPPPFAGEHFEQIQEH-DG-LL 296 (322)
T ss_dssp EEECSS-EEEEEECTTS-CEEEEEEEETTSSTTSCEEEEEEEECTT--SC--EEEEEECCTTTTTSCCCEEEEE-TT-EE
T ss_pred EEeCCC-CCCeEECCCC-CEEEEecCcccccccCCCccEEEEECCC--CC--EEEEEECCCCCccccceEEEEe-CC-EE
Confidence 11 112 5567776655 45544433 4668888864 22 23333322 2346666663 33 55
Q ss_pred EEEEeCCCcEEEEEcCC
Q 036314 288 LISASYDGKVMLWDLRT 304 (347)
Q Consensus 288 l~s~s~D~~i~lwd~~~ 304 (347)
.++...++.|.++++..
T Consensus 297 ~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 297 YIGTLFHGSVGILVYDK 313 (322)
T ss_dssp EEECSSCSEEEEEEC--
T ss_pred EEeecCCCceEEEeccc
Confidence 66666778899998864
No 255
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.95 E-value=0.0094 Score=53.21 Aligned_cols=245 Identities=9% Similarity=-0.039 Sum_probs=136.3
Q ss_pred CCEEEEEecCCeEEEEcCCCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeee
Q 036314 35 PGFILTGCYDNLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKI 114 (347)
Q Consensus 35 ~~~l~sg~~d~~i~iw~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~ 114 (347)
..+|+.+. ...|+..++.+.....+.........++|.+..+ ..+.+-...+.|+.++++.... ...
T Consensus 87 ~~~l~~~~-~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~---~ly~~D~~~~~I~r~~~~g~~~---------~~~ 153 (386)
T 3v65_B 87 EPVLLFAN-RIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRE---LVFWSDVTLDRILRANLNGSNV---------EEV 153 (386)
T ss_dssp CCEEEEEC-BSCEEEECTTSCCCEEEECSCSCEEEEEEETTTT---EEEEEETTTTEEEEEETTSCCE---------EEE
T ss_pred cceeEeec-CccceeeccCCCcEEEEecCCCccEEEEEecCCC---eEEEEeCCCCcEEEEecCCCCc---------EEE
Confidence 34444443 3567777776543333333334578899986543 3456666778899998875421 111
Q ss_pred eeccccceEEEEEeCCC-CEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEE
Q 036314 115 LRGHKASVHSIAAETSG-NMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVV 193 (347)
Q Consensus 115 ~~~h~~~V~~v~~s~~~-~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 193 (347)
+.........+++++.+ .+.++-...+.|.+.++..... .. .+...-.....++
T Consensus 154 ~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~---~~----------------------l~~~~l~~P~gia 208 (386)
T 3v65_B 154 VSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR---KV----------------------LLWQSLEKPRAIA 208 (386)
T ss_dssp ECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSC---EE----------------------EECSSCSCEEEEE
T ss_pred EeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCce---EE----------------------eecCCCCCCcEEE
Confidence 11122234568888754 5556666677888877643210 00 0001112235566
Q ss_pred e-CCCCeEEEEec-C-CcEEEEECCCCceeeeeee--CeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEe
Q 036314 194 W-PQQETIYSASW-D-HSVRTWDVEMGKDLSDIFC--GKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQF 268 (347)
Q Consensus 194 ~-~~~~~l~s~s~-d-g~v~vwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~ 268 (347)
+ |.+..|+.+.. . +.|...++... ....+.. -.....+++++.++.+..+-...+.|..+|+.... ....+
T Consensus 209 vdp~~g~ly~td~~~~~~I~r~~~dG~-~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~---~~~~~ 284 (386)
T 3v65_B 209 LHPMEGTIYWTDWGNTPRIEASSMDGS-GRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSH---RKAVI 284 (386)
T ss_dssp EETTTTEEEEEECSSSCEEEEEETTSC-SCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCS---CEEEE
T ss_pred EEcCCCeEEEeccCCCCEEEEEeCCCC-CcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCe---eEEEE
Confidence 5 45565554443 3 56777776533 2222221 12357788887777777777778899999976321 12223
Q ss_pred cCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEee
Q 036314 269 SSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCADW 323 (347)
Q Consensus 269 ~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~ 323 (347)
.........+++. . ..++++-...+.|..+|..+++...++........++.+
T Consensus 285 ~~~~~~P~giav~-~-~~ly~td~~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~v 337 (386)
T 3v65_B 285 SQGLPHPFAITVF-E-DSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHT 337 (386)
T ss_dssp CSSCSSEEEEEEE-T-TEEEEEETTTTEEEEEETTTCCSCEEEECSCSCCCCEEE
T ss_pred ECCCCCceEEEEE-C-CEEEEeeCCCCeEEEEECCCCcceEEEccCCCCCceEEE
Confidence 3334455667773 3 356777777889999996667666655433233344443
No 256
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.89 E-value=0.0094 Score=51.21 Aligned_cols=215 Identities=10% Similarity=-0.003 Sum_probs=113.6
Q ss_pred ceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCc--E
Q 036314 66 AVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCT--I 143 (347)
Q Consensus 66 ~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~--I 143 (347)
....+++.+++ ..+++...++.|..||.+... ...+. -......+++.++|+++++...... |
T Consensus 33 ~pegia~~~~g----~lyv~d~~~~~I~~~d~~g~~----------~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v 97 (306)
T 2p4o_A 33 FLENLASAPDG----TIFVTNHEVGEIVSITPDGNQ----------QIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPV 97 (306)
T ss_dssp CEEEEEECTTS----CEEEEETTTTEEEEECTTCCE----------EEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEE
T ss_pred CcceEEECCCC----CEEEEeCCCCeEEEECCCCce----------EEEEe-CCCCceeEEEcCCCcEEEEeccCCcceE
Confidence 35678887743 245666678889988875421 11111 1245788999999997666543333 5
Q ss_pred EEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeCCCCeE-EEEecCCcEEEEECCCCc-eee
Q 036314 144 SLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWPQQETI-YSASWDHSVRTWDVEMGK-DLS 221 (347)
Q Consensus 144 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l-~s~s~dg~v~vwd~~~~~-~~~ 221 (347)
..++..++.. ... ..+. .......++...+..+ ++-..++.|..+|...+. .+.
T Consensus 98 ~~~d~~~g~~----~~~-------------------~~~~-~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~ 153 (306)
T 2p4o_A 98 VSLVKSDGTV----ETL-------------------LTLP-DAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIW 153 (306)
T ss_dssp EEEECTTSCE----EEE-------------------EECT-TCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EEEcCCCCeE----EEE-------------------EeCC-CccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEE
Confidence 5555443211 000 0000 0011122332233444 333357788888876532 111
Q ss_pred e--------eeeC--eeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEE
Q 036314 222 D--------IFCG--KALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISA 291 (347)
Q Consensus 222 ~--------~~~~--~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~ 291 (347)
. .... ...+.+ ++++..++++-...+.|..||+...+.......+.. ......+++.++|. +.++.
T Consensus 154 ~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~-l~va~ 229 (306)
T 2p4o_A 154 LEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGN-LYGAT 229 (306)
T ss_dssp EECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCC-EEEEC
T ss_pred EECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCC-EEEEe
Confidence 0 0000 122334 455556777777889999999864221111122211 12345678889884 45555
Q ss_pred eCCCcEEEEEcCCCccc--eeecCCCCeEEEEeec
Q 036314 292 SYDGKVMLWDLRTAWPL--SVIDSHKDKVLCADWW 324 (347)
Q Consensus 292 s~D~~i~lwd~~~~~~~--~~~~~h~~~v~~~~~~ 324 (347)
...+.|.++|.+ ++.. ..+........+++|.
T Consensus 230 ~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~ 263 (306)
T 2p4o_A 230 HIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFG 263 (306)
T ss_dssp BTTCCEEEECTT-CCEEEEECGGGTCTTEEEEEEC
T ss_pred CCCCeEEEECCC-CCEEEEeecccccCCceEEEEe
Confidence 667899999986 5432 2233223467899996
No 257
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.81 E-value=0.0011 Score=63.81 Aligned_cols=211 Identities=11% Similarity=0.042 Sum_probs=103.2
Q ss_pred cEEEEeccccccccCccccceeeee-eccccceEEEEEeCCCCEEEEeeC-CCcEEEEecCCCCCCCccceeeeccCCCc
Q 036314 91 TLRLWKFDAEELVNHPKKIRSFKIL-RGHKASVHSIAAETSGNMVCSGSW-DCTISLWRTNDSDAAGNQVSIKKRKGNNQ 168 (347)
Q Consensus 91 ~v~~wd~~~~~~~~~~~~~~~~~~~-~~h~~~V~~v~~s~~~~~l~sgs~-Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~ 168 (347)
.+.+||..+++. +.+..+ ..+.....++++..++++++.|+. +..+.+||..+... ..
T Consensus 220 ~~~~yd~~t~~w-------~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W-------~~------ 279 (656)
T 1k3i_A 220 LTSSWDPSTGIV-------SDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSW-------IP------ 279 (656)
T ss_dssp EEEEECTTTCCB-------CCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEE-------EE------
T ss_pred EEEEEeCCCCcE-------EeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcCCce-------eE------
Confidence 578888876542 222222 123334445677889999999884 46799998764311 00
Q ss_pred cccccccccccccccCCccceEEEEeCCCCeEEEEe-cC-----CcEEEEECCCCceeeeeeeC--eeeE---EEEeeCC
Q 036314 169 VEEPQLEGEAISTLVGHTQCVSSVVWPQQETIYSAS-WD-----HSVRTWDVEMGKDLSDIFCG--KALN---CIDIGGE 237 (347)
Q Consensus 169 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s-~d-----g~v~vwd~~~~~~~~~~~~~--~~~~---~~~~~~~ 237 (347)
+..+......-....+++++.++.|+ .+ ..+.+||..+..... +... .+.. .......
T Consensus 280 ----------~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~-~~~~~~~p~~~~~~~~~~~~ 348 (656)
T 1k3i_A 280 ----------GPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTS-LPNAKVNPMLTADKQGLYRS 348 (656)
T ss_dssp ----------CCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEE-ETTSCSGGGCCCCTTGGGTT
T ss_pred ----------CCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCccee-CCCccccccccccccceeec
Confidence 00011111111223345778777777 44 468999998765332 1000 0000 0000012
Q ss_pred CCcEEEEecCC---------CcEEEEeCCCCCCCCCeEEecCCC---------CCeeEEEeCCCCCeEEEEEeCCC----
Q 036314 238 GSALIAAGGSD---------PILRIWDPRKPGTSAPVFQFSSHN---------SWISACKWHNKSWFHLISASYDG---- 295 (347)
Q Consensus 238 ~~~~la~~~~d---------~~i~iwd~~~~~~~~~~~~~~~h~---------~~v~~v~~s~~~~~~l~s~s~D~---- 295 (347)
+..+++.|+.+ ..+..||+..... ......+. ..-.++.|...+..+++.|+.++
T Consensus 349 ~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w---~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~ 425 (656)
T 1k3i_A 349 DNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGD---VKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDS 425 (656)
T ss_dssp TCSCCEEECGGGCEEECCSSSEEEEEECSTTCE---EEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSS
T ss_pred CCceEEEECCCCcEEEecCccceeeeecCCcce---eecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCC
Confidence 22333444333 4567888764321 11111111 12244555433346677777542
Q ss_pred -------cEEEEEcCCCccceee--cCCCCeE--EEEeecCCCEEEEccCC
Q 036314 296 -------KVMLWDLRTAWPLSVI--DSHKDKV--LCADWWRGDSVISGGVD 335 (347)
Q Consensus 296 -------~i~lwd~~~~~~~~~~--~~h~~~v--~~~~~~~~~~l~s~s~D 335 (347)
.|.+||..+..-.... ..+.... .++...+|+.++.||.+
T Consensus 426 ~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~ 476 (656)
T 1k3i_A 426 DATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQR 476 (656)
T ss_dssp BCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBS
T ss_pred CcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcc
Confidence 6778888765322211 1122222 22333467788888865
No 258
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.81 E-value=0.0011 Score=54.85 Aligned_cols=147 Identities=16% Similarity=0.079 Sum_probs=91.5
Q ss_pred cceEEEEeCCCCeEEEEecCC--cEEEEECCCCceeeeeeeCeee--EEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCC
Q 036314 187 QCVSSVVWPQQETIYSASWDH--SVRTWDVEMGKDLSDIFCGKAL--NCIDIGGEGSALIAAGGSDPILRIWDPRKPGTS 262 (347)
Q Consensus 187 ~~v~~~~~~~~~~l~s~s~dg--~v~vwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~ 262 (347)
.....+.|.++..+.|++.+| .|+.+|+++++.+..+...... ..+++. +..+....-.++.+.+||....
T Consensus 21 ~ftqGL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~~~v~v~D~~tl--- 95 (243)
T 3mbr_X 21 AFTEGLFYLRGHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW--RDRLIQLTWRNHEGFVYDLATL--- 95 (243)
T ss_dssp CCEEEEEEETTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETTTT---
T ss_pred cccccEEEECCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe--CCEEEEEEeeCCEEEEEECCcC---
Confidence 446788886655556666654 8999999999988777544322 234443 3456666678899999998642
Q ss_pred CCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecC--CC---CeEEEEeecCCCEEEEccCCce
Q 036314 263 APVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDS--HK---DKVLCADWWRGDSVISGGVDSK 337 (347)
Q Consensus 263 ~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~--h~---~~v~~~~~~~~~~l~s~s~D~~ 337 (347)
..+.++...... ..+. +++.. |..+..+++|.++|..+.+.+.++.- +. ..+..++|.+|..+|..-.+..
T Consensus 96 ~~~~ti~~~~~G-wglt--~dg~~-L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw~s~~ 171 (243)
T 3mbr_X 96 TPRARFRYPGEG-WALT--SDDSH-LYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLANVWLTSR 171 (243)
T ss_dssp EEEEEEECSSCC-CEEE--ECSSC-EEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTTTE
T ss_pred cEEEEEeCCCCc-eEEe--eCCCE-EEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEEECCCCe
Confidence 234444322222 3344 45555 44445688999999999877766542 11 2345677777766655544555
Q ss_pred EEEee
Q 036314 338 LCVSS 342 (347)
Q Consensus 338 v~vw~ 342 (347)
|.+-+
T Consensus 172 I~vID 176 (243)
T 3mbr_X 172 IARID 176 (243)
T ss_dssp EEEEC
T ss_pred EEEEE
Confidence 55443
No 259
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.73 E-value=0.008 Score=57.84 Aligned_cols=61 Identities=11% Similarity=0.188 Sum_probs=37.6
Q ss_pred CCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecC
Q 036314 248 DPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDS 313 (347)
Q Consensus 248 d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~ 313 (347)
++.|.-||+...+ .+-+...+.. .....+...+. +++.++.|+.++.||.++++.+..+..
T Consensus 437 ~g~l~A~D~~tG~---~~W~~~~~~~-~~~~~~~t~gg-~vf~g~~dg~l~a~d~~tG~~l~~~~~ 497 (668)
T 1kv9_A 437 SGALLAWDPVKQK---AAWKVPYPTH-WNGGTLSTAGN-LVFQGTAAGQMHAYSADKGEALWQFEA 497 (668)
T ss_dssp EEEEEEEETTTTE---EEEEEEESSS-CCCCEEEETTT-EEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred cceEEEEeCCCCc---EEEEccCCCC-CcCceeEeCCC-EEEEECCcccchhhhhhcChhheEecC
Confidence 4788899986432 2222222221 11112222343 577889999999999999988877654
No 260
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.72 E-value=0.019 Score=49.83 Aligned_cols=273 Identities=12% Similarity=-0.016 Sum_probs=132.0
Q ss_pred CCceeeccCCCC-CEEEEEecCCeEEEEcCCCe-EEEE-ee--ccCCceEEEEEeecCCCceEEEEEccCCCcEEEEecc
Q 036314 24 DDWVSAVDGSNP-GFILTGCYDNLGRVWKAGGV-CTHI-LE--GHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFD 98 (347)
Q Consensus 24 ~~~v~~~~~~~~-~~l~sg~~d~~i~iw~~~~~-~~~~-l~--~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~ 98 (347)
...+.++.+.++ ..+| .+.++.|....-.|+ .... +. .....+.+|.|.+ + ..++ ++.++.|.. ..+
T Consensus 35 ~~~~~~v~~~~~~~~~~-~G~~g~i~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~--~---~~~~-~g~~g~i~~-S~D 106 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWL-VGVNATLMETRDGGQTWEPRTLVLDHSDYRFNSVSFQG--N---EGWI-VGEPPIMLH-TTD 106 (327)
T ss_dssp SSCEEEEEESSSSCEEE-EETTTEEEEESSTTSSCEECCCCCSCCCCEEEEEEEET--T---EEEE-EEETTEEEE-ESS
T ss_pred CCcEEEEEECCCCcEEE-EcCCCeEEEeCCCCCCCeECCCCCCCCCccEEEEEecC--C---eEEE-EECCCeEEE-ECC
Confidence 346888887754 4555 567776644433332 2222 21 2234678888864 1 1233 455664433 222
Q ss_pred ccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccc
Q 036314 99 AEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEA 178 (347)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (347)
.++ .++.......+...+..+.+.+++..++.+ .++.| |...+.... . ..
T Consensus 107 gG~------tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v--~~S~DgG~t---W--~~---------------- 156 (327)
T 2xbg_A 107 GGQ------SWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAI--YRTKDSGKN---W--QA---------------- 156 (327)
T ss_dssp TTS------SCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCE--EEESSTTSS---E--EE----------------
T ss_pred CCC------CceECccccCCCCCeEEEEEECCCCEEEEe-CCccE--EEEcCCCCC---C--EE----------------
Confidence 221 122211111223446777777777666654 45544 332221110 0 00
Q ss_pred cccccCCccceEEEEeC-CCCeEEEEecCCcEE-EEECCCCceeeeee--eCeeeEEEEeeCCCCcEEEEecCCCcEEEE
Q 036314 179 ISTLVGHTQCVSSVVWP-QQETIYSASWDHSVR-TWDVEMGKDLSDIF--CGKALNCIDIGGEGSALIAAGGSDPILRIW 254 (347)
Q Consensus 179 ~~~~~~h~~~v~~~~~~-~~~~l~s~s~dg~v~-vwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~la~~~~d~~i~iw 254 (347)
...++...+..+.+. ++..++. +.++.+. -+|- .+..-..+. ....+..+.+.+++ .+++ .+.+|.+++.
T Consensus 157 --~~~~~~~~~~~~~~~~~~~~~~~-g~~G~~~~S~d~-gG~tW~~~~~~~~~~~~~~~~~~~g-~~~~-~~~~G~~~~s 230 (327)
T 2xbg_A 157 --LVQEAIGVMRNLNRSPSGEYVAV-SSRGSFYSTWEP-GQTAWEPHNRTTSRRLHNMGFTPDG-RLWM-IVNGGKIAFS 230 (327)
T ss_dssp --EECSCCCCEEEEEECTTSCEEEE-ETTSSEEEEECT-TCSSCEEEECCSSSCEEEEEECTTS-CEEE-EETTTEEEEE
T ss_pred --eecCCCcceEEEEEcCCCcEEEE-ECCCcEEEEeCC-CCCceeECCCCCCCccceeEECCCC-CEEE-EeCCceEEEe
Confidence 001122345667664 4444444 4455443 3442 122111111 22345566665544 4544 4457777776
Q ss_pred eCCCCCCCCCeEEe-cCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeec---CCCCeEEEEeecCCCEEE
Q 036314 255 DPRKPGTSAPVFQF-SSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVID---SHKDKVLCADWWRGDSVI 330 (347)
Q Consensus 255 d~~~~~~~~~~~~~-~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~---~h~~~v~~~~~~~~~~l~ 330 (347)
+.........+..- ..+...+.++.+.+++. ++.++.++.+ .+..+.++.-..+. .+...+.++.|.++..++
T Consensus 231 ~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~--~~~~g~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~~ 307 (327)
T 2xbg_A 231 DPDNSENWGELLSPLRRNSVGFLDLAYRTPNE--VWLAGGAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQGF 307 (327)
T ss_dssp ETTEEEEECCCBCTTSSCCSCEEEEEESSSSC--EEEEESTTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTEEE
T ss_pred cCCCCCeeEeccCCcccCCcceEEEEecCCCE--EEEEeCCCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCceE
Confidence 32211111111000 01223578888987653 3444557777 45555565444433 234567888886666677
Q ss_pred EccCCceEEEeec
Q 036314 331 SGGVDSKLCVSSG 343 (347)
Q Consensus 331 s~s~D~~v~vw~~ 343 (347)
.++.+|+|.-+.+
T Consensus 308 ~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 308 ILGQKGILLRYVT 320 (327)
T ss_dssp EECSTTEEEEECC
T ss_pred EEcCCceEEEEcC
Confidence 7788998877665
No 261
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.72 E-value=0.021 Score=50.15 Aligned_cols=242 Identities=10% Similarity=-0.032 Sum_probs=135.3
Q ss_pred eeeccCCCCCEEEEEecCCeEEEEcCCCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCc
Q 036314 27 VSAVDGSNPGFILTGCYDNLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHP 106 (347)
Q Consensus 27 v~~~~~~~~~~l~sg~~d~~i~iw~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~ 106 (347)
-++.+.....+|+-+. ...|+..++.+.....+.........++|.+..+ ....+-...+.|+.++++....
T Consensus 36 ~~C~~~~~~~~ll~~~-~~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~---~ly~~D~~~~~I~r~~~~g~~~---- 107 (349)
T 3v64_C 36 RSCKALGPEPVLLFAN-RIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRE---LVFWSDVTLDRILRANLNGSNV---- 107 (349)
T ss_dssp SCEEESSSCCEEEEEC-BSCEEEECTTSCCEEEEECSCSCEEEEEEETTTT---EEEEEETTTTEEEEEETTSCSC----
T ss_pred CcccccccCceeEeec-ccceEEEeCCCCeeEEeecCCCceEEEEEecccc---EEEEEeccCCceEEEecCCCCc----
Confidence 3444433334444333 3457777776643333333334578899986543 3455666778899998875421
Q ss_pred cccceeeeeeccccceEEEEEeCC-CCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCC
Q 036314 107 KKIRSFKILRGHKASVHSIAAETS-GNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGH 185 (347)
Q Consensus 107 ~~~~~~~~~~~h~~~V~~v~~s~~-~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h 185 (347)
...+.........+++.+. +++.++-...+.|.+.++..... .. .+...
T Consensus 108 -----~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~---~~----------------------l~~~~ 157 (349)
T 3v64_C 108 -----EEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR---KV----------------------LLWQS 157 (349)
T ss_dssp -----EEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC---EE----------------------EECTT
T ss_pred -----eEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCce---EE----------------------EEeCC
Confidence 1111112233467888875 45556666778888888653210 00 00011
Q ss_pred ccceEEEEe-CCCCeEEEEec-C-CcEEEEECCCCceeeeeee--CeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCC
Q 036314 186 TQCVSSVVW-PQQETIYSASW-D-HSVRTWDVEMGKDLSDIFC--GKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPG 260 (347)
Q Consensus 186 ~~~v~~~~~-~~~~~l~s~s~-d-g~v~vwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~ 260 (347)
-.....+++ |.+..|+.+.. . +.|...++... ....+.. -...+.+++++.++.+..+-...+.|..+|+....
T Consensus 158 l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~-~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~ 236 (349)
T 3v64_C 158 LEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS-GRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSH 236 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-SCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCC-CcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCc
Confidence 122355665 44555554433 3 66777776533 2222211 12457788887777777777778899999986321
Q ss_pred CCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeec
Q 036314 261 TSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVID 312 (347)
Q Consensus 261 ~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~ 312 (347)
....+.........+++. . ..+.++-...+.|...+..+++....+.
T Consensus 237 ---~~~~~~~~~~~P~giav~-~-~~ly~td~~~~~V~~~~~~~G~~~~~i~ 283 (349)
T 3v64_C 237 ---RKAVISQGLPHPFAITVF-E-DSLYWTDWHTKSINSANKFTGKNQEIIR 283 (349)
T ss_dssp ---CEEEECSSCSSEEEEEEE-T-TEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred ---eEEEEeCCCCCceEEEEE-C-CEEEEecCCCCeEEEEEccCCCccEEec
Confidence 122233334455667773 3 3556666677888888865666555543
No 262
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.66 E-value=0.026 Score=49.55 Aligned_cols=213 Identities=8% Similarity=-0.014 Sum_probs=119.6
Q ss_pred CCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCC-CEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCC
Q 036314 89 DQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSG-NMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNN 167 (347)
Q Consensus 89 Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~-~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~ 167 (347)
...|+..+++..+. ...+.+ ...+..++|++.. .++++-...+.|..+++......
T Consensus 52 ~~~I~~i~~~g~~~---------~~~~~~-~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~------------- 108 (349)
T 3v64_C 52 RIDIRQVLPHRSEY---------TLLLNN-LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVE------------- 108 (349)
T ss_dssp BSCEEEECTTSCCE---------EEEECS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-------------
T ss_pred ccceEEEeCCCCee---------EEeecC-CCceEEEEEeccccEEEEEeccCCceEEEecCCCCce-------------
Confidence 34577777754321 111222 3346789999655 45556667788888887542110
Q ss_pred ccccccccccccccccCCccceEEEEeC-CCCeE-EEEecCCcEEEEECCCCceeeeeee--CeeeEEEEeeCCCCcEEE
Q 036314 168 QVEEPQLEGEAISTLVGHTQCVSSVVWP-QQETI-YSASWDHSVRTWDVEMGKDLSDIFC--GKALNCIDIGGEGSALIA 243 (347)
Q Consensus 168 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~l-~s~s~dg~v~vwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~la 243 (347)
............+++. .++.| ++-...+.|.+.++.... ...+.. -.....+++.|.++.++.
T Consensus 109 ------------~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~-~~~l~~~~l~~P~~iavdp~~g~ly~ 175 (349)
T 3v64_C 109 ------------EVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH-RKVLLWQSLEKPRAIALHPMEGTIYW 175 (349)
T ss_dssp ------------EEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECTTCSCEEEEEEETTTTEEEE
T ss_pred ------------EEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCc-eEEEEeCCCCCcceEEEecCcCeEEE
Confidence 0000000112345542 34444 454556788888876433 222221 134577888877777776
Q ss_pred EecCC-CcEEEEeCCCCCCCCCeEEe-cCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEE
Q 036314 244 AGGSD-PILRIWDPRKPGTSAPVFQF-SSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCA 321 (347)
Q Consensus 244 ~~~~d-~~i~iwd~~~~~~~~~~~~~-~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~ 321 (347)
+-... +.|..+++.... ...+ .....+-..++++|++..+.++-+..+.|..+|++.......+........++
T Consensus 176 td~~~~~~I~r~~~dG~~----~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi 251 (349)
T 3v64_C 176 TDWGNTPRIEASSMDGSG----RRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAI 251 (349)
T ss_dssp EECSSSCEEEEEETTSCS----CEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEE
T ss_pred eccCCCCEEEEEeCCCCC----cEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEE
Confidence 66555 889999876321 1222 22344568899998877767776777899999987533222232223345566
Q ss_pred eecCCCEEEEccCCceEEEe
Q 036314 322 DWWRGDSVISGGVDSKLCVS 341 (347)
Q Consensus 322 ~~~~~~~l~s~s~D~~v~vw 341 (347)
++..+..+++-...+.|...
T Consensus 252 av~~~~ly~td~~~~~V~~~ 271 (349)
T 3v64_C 252 TVFEDSLYWTDWHTKSINSA 271 (349)
T ss_dssp EEETTEEEEEETTTTEEEEE
T ss_pred EEECCEEEEecCCCCeEEEE
Confidence 65445445554455555544
No 263
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.59 E-value=0.0096 Score=58.14 Aligned_cols=192 Identities=12% Similarity=0.107 Sum_probs=101.8
Q ss_pred ceEEEEEe-CCCCEEE-EeeCC----CcEEEEecCCC-CCCCccceeeeccCCCccccccccccccccccCCccceEEEE
Q 036314 121 SVHSIAAE-TSGNMVC-SGSWD----CTISLWRTNDS-DAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVV 193 (347)
Q Consensus 121 ~V~~v~~s-~~~~~l~-sgs~D----g~I~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 193 (347)
.+...+|| |||++|+ +.+.+ .+|+++|+.++ ..... .+. .....+.
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~------------------------~~~---~~~~~~~ 227 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD------------------------KVS---GTNGEIV 227 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC------------------------CEE---EECSCCE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc------------------------ccc---CceeeEE
Confidence 57788999 9999776 33333 35999998764 31000 000 0122456
Q ss_pred e-CCCCeEEEEecC-----CcEEEEECCCCcee-eeeee---CeeeEEEEeeCCCCcEEEEec--CCCcEEEEeCCCCCC
Q 036314 194 W-PQQETIYSASWD-----HSVRTWDVEMGKDL-SDIFC---GKALNCIDIGGEGSALIAAGG--SDPILRIWDPRKPGT 261 (347)
Q Consensus 194 ~-~~~~~l~s~s~d-----g~v~vwd~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~la~~~--~d~~i~iwd~~~~~~ 261 (347)
| ++++.|+....| ..|.++++.++... ..+.. ......+.+++++..++++.. ....|.++|+..+..
T Consensus 228 WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~ 307 (751)
T 2xe4_A 228 WGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNA 307 (751)
T ss_dssp ECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTT
T ss_pred EecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCC
Confidence 6 577777766665 25777888765422 11211 122345677776654444432 345788888865311
Q ss_pred CCC-eEEe-cCCCCCeeEEEeCCCCCeEEEEEeCC--C--cEEEEEcCCCcccee-ecCCCC--eEEEEeecCCCEEEEc
Q 036314 262 SAP-VFQF-SSHNSWISACKWHNKSWFHLISASYD--G--KVMLWDLRTAWPLSV-IDSHKD--KVLCADWWRGDSVISG 332 (347)
Q Consensus 262 ~~~-~~~~-~~h~~~v~~v~~s~~~~~~l~s~s~D--~--~i~lwd~~~~~~~~~-~~~h~~--~v~~~~~~~~~~l~s~ 332 (347)
.. +..+ ....+...++.|+. +..+++....+ + .|..+|+.++..... +..|.. .+..+.+..+..+++.
T Consensus 308 -~~~~~~l~~~~~~~~~s~~~~~-g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~ 385 (751)
T 2xe4_A 308 -HNTLEIVRPREKGVRYDVQMHG-TSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAG 385 (751)
T ss_dssp -CCCEEESSCCCTTCCEEEEEET-TTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECSSEEEEEE
T ss_pred -CceeEEeecCCCCceEEEeeee-CCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEECCEEEEEE
Confidence 11 0233 23334445555543 44555555544 3 556667664322233 333443 3455666545456677
Q ss_pred cCCceEEEe
Q 036314 333 GVDSKLCVS 341 (347)
Q Consensus 333 s~D~~v~vw 341 (347)
..|+..+||
T Consensus 386 ~~~g~~~l~ 394 (751)
T 2xe4_A 386 RRAGLTRIW 394 (751)
T ss_dssp EETTEEEEE
T ss_pred EeCCEEEEE
Confidence 777776655
No 264
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.59 E-value=0.031 Score=48.69 Aligned_cols=198 Identities=14% Similarity=0.194 Sum_probs=109.8
Q ss_pred CEEEEEecCCeEEEEcCCCeEEEEeeccCCceEEEEEeecC---CCce-EEEEEccC--CCcEEEEecc--ccccccCcc
Q 036314 36 GFILTGCYDNLGRVWKAGGVCTHILEGHCGAVSSVNIIKSD---GLKY-VTVATASK--DQTLRLWKFD--AEELVNHPK 107 (347)
Q Consensus 36 ~~l~sg~~d~~i~iw~~~~~~~~~l~~h~~~V~~v~~~~~~---~~~~-~~l~s~s~--Dg~v~~wd~~--~~~~~~~~~ 107 (347)
.+++....++-+.++|+.|+.++.+.. +.++.+..-+.. +... ..+++.-. +++|++|+++ .+++.....
T Consensus 41 s~ii~t~k~~gL~Vydl~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~~ 118 (355)
T 3amr_A 41 SKLITTNKKSGLVVYSLDGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMTD 118 (355)
T ss_dssp CEEEEEETTTEEEEEETTSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECSC
T ss_pred cEEEEEcCCCCEEEEcCCCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeeccc
Confidence 355555566789999999998888764 567788776621 1010 12444444 6899999774 222111000
Q ss_pred ccceeeeeeccccceEEEEE--eCC-CC-EEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccccccccccc
Q 036314 108 KIRSFKILRGHKASVHSIAA--ETS-GN-MVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLV 183 (347)
Q Consensus 108 ~~~~~~~~~~h~~~V~~v~~--s~~-~~-~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (347)
...++ ..-...+..+++ ++. ++ +++....+|.+..|++...... ....+.++++.
T Consensus 119 ~~~pv---~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g------------------~~~~~lVR~f~ 177 (355)
T 3amr_A 119 PDHPI---ATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNG------------------YISGKKVRAFK 177 (355)
T ss_dssp TTSCE---ECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTS------------------CEEEEEEEEEE
T ss_pred cccCc---CCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCC------------------cccceEEEEec
Confidence 00000 000133455665 664 44 6778888899999987432110 00122233333
Q ss_pred CCccceEEEEe-CCCCeEEEEecCCcEEEEECC-----CCceeeeeeeC---eeeEEEEee--CCCC-cEEEEecCCCcE
Q 036314 184 GHTQCVSSVVW-PQQETIYSASWDHSVRTWDVE-----MGKDLSDIFCG---KALNCIDIG--GEGS-ALIAAGGSDPIL 251 (347)
Q Consensus 184 ~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~-----~~~~~~~~~~~---~~~~~~~~~--~~~~-~~la~~~~d~~i 251 (347)
... .+..+.. +....|+.+-.+..|..+|.+ ++..+..+..+ ..+..+++. +++. .+++++-.+++.
T Consensus 178 lgs-q~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~ 256 (355)
T 3amr_A 178 MNS-QTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSY 256 (355)
T ss_dssp CSS-CEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEE
T ss_pred CCC-CcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEE
Confidence 322 2334443 556789999998777777754 22333322222 245666663 3333 466666567899
Q ss_pred EEEeCC
Q 036314 252 RIWDPR 257 (347)
Q Consensus 252 ~iwd~~ 257 (347)
.+||.+
T Consensus 257 ~Vydr~ 262 (355)
T 3amr_A 257 AIYDRQ 262 (355)
T ss_dssp EEEESS
T ss_pred EEEECC
Confidence 999986
No 265
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.58 E-value=0.039 Score=49.42 Aligned_cols=247 Identities=9% Similarity=-0.011 Sum_probs=138.4
Q ss_pred EEEEEecCCeEEEEcCCCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeee
Q 036314 37 FILTGCYDNLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILR 116 (347)
Q Consensus 37 ~l~sg~~d~~i~iw~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~ 116 (347)
+|+.+. ...|+.-++.+.....+......+..|+|.+..+ ....+-...+.|+.++++..... ......+.
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~---~lywsD~~~~~I~~~~~~g~~~~-----~~~~~~~~ 155 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASN---RIYWSDLSQRMICSTQLDRAHGV-----SSYDTVIS 155 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCSCEEEECSCSCEEEEEEETTTT---EEEEEETTTTEEEEEEC-----------CCCEEEEC
T ss_pred eeEEec-cceeEEEccCCcceeEeccccCcceEEeeeeccC---ceEEEecCCCeEEEEEcccCCCC-----CcceEEEe
Confidence 444443 3678877876543333344456678999987543 34556666788988887642100 00111222
Q ss_pred ccccceEEEEEeC-CCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccc-cCCccceEEEEe
Q 036314 117 GHKASVHSIAAET-SGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTL-VGHTQCVSSVVW 194 (347)
Q Consensus 117 ~h~~~V~~v~~s~-~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~ 194 (347)
........+++.+ .+++.++-...+.|.+.++..... ..+ ...-.....+++
T Consensus 156 ~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~--------------------------~~l~~~~~~~P~~iav 209 (400)
T 3p5b_L 156 RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR--------------------------KTLFRENGSKPRAIVV 209 (400)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSE--------------------------EEEEECSSCCEEEEEE
T ss_pred CCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCce--------------------------EEEEeCCCCCcceEEE
Confidence 2334567889987 455666667778888887653210 000 001122456665
Q ss_pred -CCCCeEEEEec--CCcEEEEECCCCceeeeeeeC--eeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEec
Q 036314 195 -PQQETIYSASW--DHSVRTWDVEMGKDLSDIFCG--KALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFS 269 (347)
Q Consensus 195 -~~~~~l~s~s~--dg~v~vwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~ 269 (347)
|.+..|+-+.+ .+.|...++... ....+... .....+++++.++.+..+-...+.|..+|+.... ...+....
T Consensus 210 dp~~g~ly~td~~~~~~I~~~~~dG~-~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~-~~~~~~~~ 287 (400)
T 3p5b_L 210 DPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-RKTILEDE 287 (400)
T ss_dssp ETTTTEEEEEECSSSCCEEEEETTSC-SCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCC-CEEEEECS
T ss_pred ecccCeEEEEeCCCCCEEEEEeCCCC-ccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCc-cEEEEeCC
Confidence 44566655443 357888887543 22223221 3457788887777777777778899999986422 11111111
Q ss_pred CCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEe
Q 036314 270 SHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCAD 322 (347)
Q Consensus 270 ~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~ 322 (347)
+....-..+++. +..++++-...+.|..+|..+++.+.++........++.
T Consensus 288 ~~l~~P~gl~v~--~~~lywtd~~~~~V~~~~~~~G~~~~~i~~~~~~p~~i~ 338 (400)
T 3p5b_L 288 KRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMV 338 (400)
T ss_dssp STTSSEEEEEEE--TTEEEEEESSSCSEEEEESSSCCCCEEEECSCSCEEEEE
T ss_pred CCCCCCEEEEEe--CCEEEEecCCCCeEEEEEcCCCCceEEEecCCCCCceEE
Confidence 122334556663 335677777888999999777776666544333444443
No 266
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.55 E-value=0.035 Score=52.31 Aligned_cols=61 Identities=13% Similarity=-0.030 Sum_probs=36.5
Q ss_pred CCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeec
Q 036314 247 SDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVID 312 (347)
Q Consensus 247 ~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~ 312 (347)
.++.|..||+...+ .+.++... ..+....+...+. ++..++.|+.+..||.++++.+-++.
T Consensus 442 ~~g~l~a~D~~tG~---~~W~~~~~-~~~~~~~~~t~gg-~v~~g~~dg~l~a~D~~tG~~lw~~~ 502 (571)
T 2ad6_A 442 EMGQIRAFDLTTGK---AKWTKWEK-FAAWGGTLYTKGG-LVWYATLDGYLKALDNKDGKELWNFK 502 (571)
T ss_dssp CCEEEEEECTTTCC---EEEEEEES-SCCCSBCEEETTT-EEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CCCeEEEEECCCCC---EEEEecCC-CCccceeEEECCC-EEEEEcCCCeEEEEECCCCCEEEEEe
Confidence 35788889886432 22232211 1111111111233 46678999999999999999887665
No 267
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.45 E-value=0.014 Score=57.01 Aligned_cols=112 Identities=10% Similarity=0.041 Sum_probs=59.9
Q ss_pred ceeeccCC-CC-CEEEEE-ecC----CeEEEEcCCCe-EEEEeecc-CCceEEEEEeecCCCceEEEEEccCC-----Cc
Q 036314 26 WVSAVDGS-NP-GFILTG-CYD----NLGRVWKAGGV-CTHILEGH-CGAVSSVNIIKSDGLKYVTVATASKD-----QT 91 (347)
Q Consensus 26 ~v~~~~~~-~~-~~l~sg-~~d----~~i~iw~~~~~-~~~~l~~h-~~~V~~v~~~~~~~~~~~~l~s~s~D-----g~ 91 (347)
.+.+.++| ++ ++||-+ ..+ .+|+++|+.+. .. +..+ ......+.|+|++. .|+-.+.| ..
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~--l~~~~~~~~~~~~WspDg~----~l~y~~~d~~~~~~~ 248 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQT--IADKVSGTNGEIVWGPDHT----SLFYVTKDETLRENK 248 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCC--CCCCEEEECSCCEECSSTT----EEEEEEECTTCCEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEe--CCccccCceeeEEEecCCC----EEEEEEECCCCCCCE
Confidence 67778888 54 566633 222 35999997532 21 1111 11134678888553 24433443 25
Q ss_pred EEEEeccccccccCccccceeeeee-ccccceEEEEEeCCCCEEEEeeC---CCcEEEEecCC
Q 036314 92 LRLWKFDAEELVNHPKKIRSFKILR-GHKASVHSIAAETSGNMVCSGSW---DCTISLWRTND 150 (347)
Q Consensus 92 v~~wd~~~~~~~~~~~~~~~~~~~~-~h~~~V~~v~~s~~~~~l~sgs~---Dg~I~iwd~~~ 150 (347)
|.++++.+++. +....+. .+......+.++|||++|+..+. ...|.++|+.+
T Consensus 249 v~~~~lgt~~~-------~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~ 304 (751)
T 2xe4_A 249 VWRHVMGKLQS-------EDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRK 304 (751)
T ss_dssp EEEEETTSCGG-------GCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSS
T ss_pred EEEEECCCCch-------hcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCC
Confidence 77777654321 1111222 22334567889999998775442 33466677654
No 268
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.44 E-value=0.1 Score=51.04 Aligned_cols=282 Identities=7% Similarity=0.002 Sum_probs=145.6
Q ss_pred CCceeeccCCCCCEEEEEecCCeEEEEcCCCeEEEEee---------------ccCCceEEEEEeecCCCceEEEEEccC
Q 036314 24 DDWVSAVDGSNPGFILTGCYDNLGRVWKAGGVCTHILE---------------GHCGAVSSVNIIKSDGLKYVTVATASK 88 (347)
Q Consensus 24 ~~~v~~~~~~~~~~l~sg~~d~~i~iw~~~~~~~~~l~---------------~h~~~V~~v~~~~~~~~~~~~l~s~s~ 88 (347)
...|.++....++.|-.|...+-+.+++........+. -....|.++...+++. |-.|+.
T Consensus 257 ~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-----lWigt~ 331 (781)
T 3v9f_A 257 SSYIFSIKQLKDNKLWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-----IWIGTW 331 (781)
T ss_dssp CCCEEEEEECTTSEEEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCC-----EEEEEB
T ss_pred CceEEEEEECCCCCEEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-----EEEEec
Confidence 35677777655555666666344666776432221111 1234677776655332 455676
Q ss_pred CCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCc
Q 036314 89 DQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQ 168 (347)
Q Consensus 89 Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~ 168 (347)
++-|..++..................-.-....|.++...++|.+. .|+.++-+..|+..+.... .
T Consensus 332 ~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lW-igt~~~Gl~~~~~~~~~~~--------~----- 397 (781)
T 3v9f_A 332 GGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLW-IGTDGGGINVFENGKRVAI--------Y----- 397 (781)
T ss_dssp SSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEE-EEEBSSCEEEEETTEEEEE--------C-----
T ss_pred CCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEE-EEeCCCcEEEEECCCCeEE--------E-----
Confidence 7778888876443211000000000000123568899888877654 4666677888875431100 0
Q ss_pred cccccccccccccccCCccceEEEEeCCCCeEEEEecCCcEEEEECCCCceeeeee----eCeeeEEEEeeCCCCcEEEE
Q 036314 169 VEEPQLEGEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIF----CGKALNCIDIGGEGSALIAA 244 (347)
Q Consensus 169 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~----~~~~~~~~~~~~~~~~~la~ 244 (347)
+ ..........|.++.......|..|+.++.+..+|.++++. ..+. ....+.++...+++ .+ -.
T Consensus 398 -----~----~~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~-~~~~~~~~~~~~v~~i~~d~~g-~l-wi 465 (781)
T 3v9f_A 398 -----N----KENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKF-QIIELEKNELLDVRVFYEDKNK-KI-WI 465 (781)
T ss_dssp -----C---------CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSCEE-EECCSTTTCCCCEEEEEECTTS-EE-EE
T ss_pred -----c----cCCCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCCcE-EEeccCCCCCCeEEEEEECCCC-CE-EE
Confidence 0 00001123457777765445566677777799999876643 2222 12356666664433 33 34
Q ss_pred ecCCCcEEEEeCCCCCCCCCeEEec---CCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecC----CCCe
Q 036314 245 GGSDPILRIWDPRKPGTSAPVFQFS---SHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDS----HKDK 317 (347)
Q Consensus 245 ~~~d~~i~iwd~~~~~~~~~~~~~~---~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~----h~~~ 317 (347)
|+. +-|..||..... ........ .....|.++...+++. |..|+.++-+..+|.++++ ...+.. ..+.
T Consensus 466 gt~-~Gl~~~~~~~~~-~~~~~~~~~~~~~~~~i~~i~~d~~g~--lWigt~~~Gl~~~~~~~~~-~~~~~~~~~l~~~~ 540 (781)
T 3v9f_A 466 GTH-AGVFVIDLASKK-VIHHYDTSNSQLLENFVRSIAQDSEGR--FWIGTFGGGVGIYTPDMQL-VRKFNQYEGFCSNT 540 (781)
T ss_dssp EET-TEEEEEESSSSS-CCEEECTTTSSCSCSCEEEEEECTTCC--EEEEESSSCEEEECTTCCE-EEEECTTTTCSCSC
T ss_pred EEC-CceEEEeCCCCe-EEecccCcccccccceeEEEEEcCCCC--EEEEEcCCCEEEEeCCCCe-EEEccCCCCCCCCe
Confidence 444 568889876421 11111100 1135788998888874 5556664457778887653 222321 1346
Q ss_pred EEEEeec-CCCEEEEccCCceEEEee
Q 036314 318 VLCADWW-RGDSVISGGVDSKLCVSS 342 (347)
Q Consensus 318 v~~~~~~-~~~~l~s~s~D~~v~vw~ 342 (347)
|.++... +|...++ +.+|-|..++
T Consensus 541 i~~i~~d~~g~lWi~-T~~Glv~~~d 565 (781)
T 3v9f_A 541 INQIYRSSKGQMWLA-TGEGLVCFPS 565 (781)
T ss_dssp EEEEEECTTSCEEEE-ETTEEEEESC
T ss_pred eEEEEECCCCCEEEE-ECCCceEEEC
Confidence 7777764 4544333 3356545554
No 269
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.40 E-value=0.054 Score=46.85 Aligned_cols=218 Identities=9% Similarity=0.019 Sum_probs=118.6
Q ss_pred CCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCC-CCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCC
Q 036314 89 DQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETS-GNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNN 167 (347)
Q Consensus 89 Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~-~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~ 167 (347)
...|+..+++.... .....+. ....+..++|++. +.+.++-...+.|..++........ .
T Consensus 12 ~~~I~~i~l~~~~~-------~~~~~~~-~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~-~---------- 72 (318)
T 3sov_A 12 RRDLRLVDATNGKE-------NATIVVG-GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQ-N---------- 72 (318)
T ss_dssp EEEEEEEETTCTTS-------CCEEEEE-EEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCC-E----------
T ss_pred cCeEEEEECCCCce-------EEEEEec-CCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceE-E----------
Confidence 45788888875421 0001111 2234568899875 4566676777889888875431100 0
Q ss_pred ccccccccccccccccCCccceEEEEeC-CCCe-EEEEecCCcEEEEECCCCceeeeee--eCeeeEEEEeeCCCCcEEE
Q 036314 168 QVEEPQLEGEAISTLVGHTQCVSSVVWP-QQET-IYSASWDHSVRTWDVEMGKDLSDIF--CGKALNCIDIGGEGSALIA 243 (347)
Q Consensus 168 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~-l~s~s~dg~v~vwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~la 243 (347)
.+...-.....+++. .++. +.+-...+.|.++++.... ...+. .......+++.+.++.++.
T Consensus 73 -------------~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~-~~~l~~~~~~~P~giavdp~~g~ly~ 138 (318)
T 3sov_A 73 -------------VVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSL-RKVLFWQELDQPRAIALDPSSGFMYW 138 (318)
T ss_dssp -------------EEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECSSCSSEEEEEEEGGGTEEEE
T ss_pred -------------EEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCc-EEEEEeCCCCCccEEEEeCCCCEEEE
Confidence 000000122345542 3444 4454556789999876432 22222 1234567888776666655
Q ss_pred Ee-cCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEEe
Q 036314 244 AG-GSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCAD 322 (347)
Q Consensus 244 ~~-~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~ 322 (347)
+- +..+.|..+++... . ....+...-.+-..++++|++..+.++=+..+.|..+|++.........+......+++
T Consensus 139 td~~~~~~I~r~~~dG~--~-~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~gla 215 (318)
T 3sov_A 139 TDWGEVPKIERAGMDGS--S-RFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALT 215 (318)
T ss_dssp EECSSSCEEEEEETTSC--S-CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEE
T ss_pred EecCCCCEEEEEEcCCC--C-eEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEE
Confidence 54 33578888887632 1 11222233345678999998777667667788999999974332222222233445555
Q ss_pred ecCCCEEEEccCCceEEEee
Q 036314 323 WWRGDSVISGGVDSKLCVSS 342 (347)
Q Consensus 323 ~~~~~~l~s~s~D~~v~vw~ 342 (347)
...+..+.+-...+.|...+
T Consensus 216 v~~~~lywtd~~~~~V~~~~ 235 (318)
T 3sov_A 216 LFEDILYWTDWSTHSILACN 235 (318)
T ss_dssp EETTEEEEEETTTTEEEEEE
T ss_pred EeCCEEEEEecCCCeEEEEE
Confidence 54444455544455555443
No 270
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.37 E-value=0.058 Score=46.50 Aligned_cols=216 Identities=10% Similarity=0.060 Sum_probs=121.0
Q ss_pred CcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCC-CEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCc
Q 036314 90 QTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSG-NMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQ 168 (347)
Q Consensus 90 g~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~-~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~ 168 (347)
..|+..|+...+. ...+. .......++|++.+ .++++-...+.|..+++..... +...
T Consensus 10 ~~I~~i~~~~~~~---------~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~-~~~~---------- 68 (316)
T 1ijq_A 10 HEVRKMTLDRSEY---------TSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHG-VSSY---------- 68 (316)
T ss_dssp SSEEEEETTSCCC---------EEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC---------C----------
T ss_pred CeEEEEECCCcce---------Eehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCC-Cccc----------
Confidence 4688888876432 11122 23456789999865 4556666778999988754100 0000
Q ss_pred cccccccccccccccCCccceEEEEeC-CCCeE-EEEecCCcEEEEECCCCceeeeeee--CeeeEEEEeeCCCCcEEEE
Q 036314 169 VEEPQLEGEAISTLVGHTQCVSSVVWP-QQETI-YSASWDHSVRTWDVEMGKDLSDIFC--GKALNCIDIGGEGSALIAA 244 (347)
Q Consensus 169 ~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~l-~s~s~dg~v~vwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~la~ 244 (347)
...+...-.....+++. .++.| ++-...+.|.+.|+.... ...+.. ......+++.|.++.++.+
T Consensus 69 ----------~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~-~~~~~~~~~~~P~~iavdp~~g~ly~~ 137 (316)
T 1ijq_A 69 ----------DTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK-RKTLFRENGSKPRAIVVDPVHGFMYWT 137 (316)
T ss_dssp ----------EEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSS-EEEEEECTTCCEEEEEEETTTTEEEEE
T ss_pred ----------EEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCc-eEEEEECCCCCcceEEeCCCCCEEEEE
Confidence 00000011122455552 34444 444567889999976432 232322 2346778888777766666
Q ss_pred ecCC-CcEEEEeCCCCCCCCCeEEe-cCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceee-cC--CCCeEE
Q 036314 245 GGSD-PILRIWDPRKPGTSAPVFQF-SSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVI-DS--HKDKVL 319 (347)
Q Consensus 245 ~~~d-~~i~iwd~~~~~~~~~~~~~-~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~-~~--h~~~v~ 319 (347)
.... +.|..+++... . ...+ .....+-..++++|++..+.++-+..+.|..+|++.. ...++ .. .-....
T Consensus 138 d~~~~~~I~~~~~dG~--~--~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~-~~~~~~~~~~~~~~P~ 212 (316)
T 1ijq_A 138 DWGTPAKIKKGGLNGV--D--IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG-NRKTILEDEKRLAHPF 212 (316)
T ss_dssp ECSSSCEEEEEETTSC--C--EEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEEECTTTTSSEE
T ss_pred ccCCCCeEEEEcCCCC--C--eEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCC-ceEEEeecCCccCCcE
Confidence 5443 78888887531 1 2222 2234567889999887776677677889999999743 33333 21 123345
Q ss_pred EEeecCCCEEEEccCCceEEEee
Q 036314 320 CADWWRGDSVISGGVDSKLCVSS 342 (347)
Q Consensus 320 ~~~~~~~~~l~s~s~D~~v~vw~ 342 (347)
++++..+..+++-...+.|...+
T Consensus 213 giav~~~~ly~~d~~~~~V~~~~ 235 (316)
T 1ijq_A 213 SLAVFEDKVFWTDIINEAIFSAN 235 (316)
T ss_dssp EEEEETTEEEEEETTTTEEEEEE
T ss_pred EEEEECCEEEEEECCCCeEEEEe
Confidence 66664455555555566665543
No 271
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.34 E-value=0.11 Score=49.07 Aligned_cols=75 Identities=17% Similarity=0.178 Sum_probs=42.1
Q ss_pred CCcEEEEeCCCCCCCCCeEEecCCCCCe-eEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeE-EEEee-c
Q 036314 248 DPILRIWDPRKPGTSAPVFQFSSHNSWI-SACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKV-LCADW-W 324 (347)
Q Consensus 248 d~~i~iwd~~~~~~~~~~~~~~~h~~~v-~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v-~~~~~-~ 324 (347)
++.|.-||+...+ .+-+...+.... ..+.. .+. +++.++.|+.++.||.++|+.+-++....+.. .-+.| .
T Consensus 465 ~G~l~A~D~~tG~---~~W~~~~~~~~~~g~~~t--agg-lvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~ 538 (582)
T 1flg_A 465 VGSLRAMDPVSGK---VVWEHKEHLPLWAGVLAT--AGN-LVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQ 538 (582)
T ss_dssp SEEEEEECTTTCC---EEEEEEESSCCCSCCEEE--TTT-EEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEE
T ss_pred cceEEEEECCCCC---EEEEecCCCCCcccceEe--CCC-EEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEE
Confidence 5778888886432 122222111111 11222 233 57779999999999999999887765432211 11455 3
Q ss_pred CCCE
Q 036314 325 RGDS 328 (347)
Q Consensus 325 ~~~~ 328 (347)
+|++
T Consensus 539 ~G~q 542 (582)
T 1flg_A 539 DGEQ 542 (582)
T ss_dssp TTEE
T ss_pred CCEE
Confidence 6664
No 272
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.32 E-value=0.14 Score=50.03 Aligned_cols=271 Identities=13% Similarity=0.084 Sum_probs=139.0
Q ss_pred CceeeccCCCCCEEEEEecCCeEEEEcCCC-eEEEEeec-------cCCceEEEEEeecCCCceEEEEEccCCCcEEEEe
Q 036314 25 DWVSAVDGSNPGFILTGCYDNLGRVWKAGG-VCTHILEG-------HCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWK 96 (347)
Q Consensus 25 ~~v~~~~~~~~~~l~sg~~d~~i~iw~~~~-~~~~~l~~-------h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd 96 (347)
..|.++.....+.|-.|..+ -+.+||... ........ ....|.++...+++ .|..|+..+-|.+++
T Consensus 211 ~~i~~i~~d~~g~lwigt~~-Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g-----~lWigt~~~Gl~~~~ 284 (781)
T 3v9f_A 211 NDVRCIYKDTNGNIWIGTSK-GLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDN-----KLWIATELNGIMILD 284 (781)
T ss_dssp SSEEEEEECTTCCEEEEETT-EEEEEETTTTEEEC-----------CCCCEEEEEECTTS-----EEEEEESSSCEEEEE
T ss_pred CceeEEEEcCCCCEEEEeCC-cHheECCCCCcEEEEEcCCCccccccCceEEEEEECCCC-----CEEEEeCCCCeEEEC
Confidence 55777765544434444445 477788643 33222111 13457777654422 245566645688888
Q ss_pred ccccccccCcc-ccceeee----eeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccc
Q 036314 97 FDAEELVNHPK-KIRSFKI----LRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEE 171 (347)
Q Consensus 97 ~~~~~~~~~~~-~~~~~~~----~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 171 (347)
....++..... ....+.. -.-....|.++...++|.+. .|+.++-|..++....... ...... .
T Consensus 285 ~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~lW-igt~~~Gl~~~~~~~~~~~-----~~~~~~----~- 353 (781)
T 3v9f_A 285 LQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNNIW-IGTWGGGINFISNAPPTFH-----TWSYSP----T- 353 (781)
T ss_dssp TTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCCEE-EEEBSSCEEEECSSCCSCE-----EEC---------
T ss_pred CCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCCEE-EEecCCeEEEeCCCCCcce-----eeccCc----c-
Confidence 76654321100 0000000 01135678999888888644 4777788888876532110 000000 0
Q ss_pred ccccccccccccCCccceEEEEeCCCCeEEEEecCCcEEEEECCCCceeeeee-----eCeeeEEEEeeCCCCcEEEEec
Q 036314 172 PQLEGEAISTLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIF-----CGKALNCIDIGGEGSALIAAGG 246 (347)
Q Consensus 172 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~la~~~ 246 (347)
......+ ....|.++.......|..|+.++.|..||..++... .+. ....+.++...+.+ .+ -.|+
T Consensus 354 ----~~~~~~l--~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~-~~~~~~~~~~~~v~~i~~d~~g-~l-Wigt 424 (781)
T 3v9f_A 354 ----QMNESSL--SNKVVSSVCDDGQGKLWIGTDGGGINVFENGKRVAI-YNKENRELLSNSVLCSLKDSEG-NL-WFGT 424 (781)
T ss_dssp ----CCCSSCC--SSSCEEEEEECTTSCEEEEEBSSCEEEEETTEEEEE-CC-----CCCSBEEEEEECTTS-CE-EEEE
T ss_pred ----ccccCCC--CCcceEEEEEcCCCCEEEEeCCCcEEEEECCCCeEE-EccCCCCCCCcceEEEEECCCC-CE-EEEe
Confidence 0000001 224577777654456767777777999997654321 111 12346666664443 34 3456
Q ss_pred CCCcEEEEeCCCCCCCCCeEEec---CCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCC-----CCeE
Q 036314 247 SDPILRIWDPRKPGTSAPVFQFS---SHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSH-----KDKV 318 (347)
Q Consensus 247 ~d~~i~iwd~~~~~~~~~~~~~~---~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h-----~~~v 318 (347)
.++-+..+|.+.. ....+. .....|.++...+++. |..|+. +-+.++|.++++........ ...|
T Consensus 425 ~~~Gl~~~~~~~~----~~~~~~~~~~~~~~v~~i~~d~~g~--lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i 497 (781)
T 3v9f_A 425 YLGNISYYNTRLK----KFQIIELEKNELLDVRVFYEDKNKK--IWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFV 497 (781)
T ss_dssp TTEEEEEECSSSC----EEEECCSTTTCCCCEEEEEECTTSE--EEEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCE
T ss_pred ccCCEEEEcCCCC----cEEEeccCCCCCCeEEEEEECCCCC--EEEEEC-CceEEEeCCCCeEEecccCccccccccee
Confidence 6667888886532 122221 2345788888887773 555555 55888998876433221111 3568
Q ss_pred EEEeec-CCCE
Q 036314 319 LCADWW-RGDS 328 (347)
Q Consensus 319 ~~~~~~-~~~~ 328 (347)
.++... +|..
T Consensus 498 ~~i~~d~~g~l 508 (781)
T 3v9f_A 498 RSIAQDSEGRF 508 (781)
T ss_dssp EEEEECTTCCE
T ss_pred EEEEEcCCCCE
Confidence 887764 3543
No 273
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.32 E-value=0.11 Score=48.80 Aligned_cols=51 Identities=18% Similarity=0.076 Sum_probs=31.9
Q ss_pred CCCcEEEEEcCCCccceeecCCCCeEEEEeec-CCCEEEEccCCceEEEeecc
Q 036314 293 YDGKVMLWDLRTAWPLSVIDSHKDKVLCADWW-RGDSVISGGVDSKLCVSSGV 344 (347)
Q Consensus 293 ~D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~~-~~~~l~s~s~D~~v~vw~~~ 344 (347)
.++.+..||+++++.+-++.. ...+.+.... .+..+..++.|+.|+.++..
T Consensus 442 ~~g~l~a~D~~tG~~~W~~~~-~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~ 493 (571)
T 2ad6_A 442 EMGQIRAFDLTTGKAKWTKWE-KFAAWGGTLYTKGGLVWYATLDGYLKALDNK 493 (571)
T ss_dssp CCEEEEEECTTTCCEEEEEEE-SSCCCSBCEEETTTEEEEECTTSEEEEEETT
T ss_pred CCCeEEEEECCCCCEEEEecC-CCCccceeEEECCCEEEEEcCCCeEEEEECC
Confidence 357899999998876554432 1222222221 35666668889999988743
No 274
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.32 E-value=0.14 Score=49.98 Aligned_cols=228 Identities=10% Similarity=-0.003 Sum_probs=127.1
Q ss_pred CeEEEEcCCCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEE
Q 036314 45 NLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHS 124 (347)
Q Consensus 45 ~~i~iw~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~ 124 (347)
..|+..++.+.....+......+.+|+|.+..+ .++.+-...+.|+.+++...... ......+.........
T Consensus 404 ~~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~~---~lY~sD~~~~~I~~~~l~g~~~~-----~~~~~vi~~~l~~P~G 475 (791)
T 3m0c_C 404 HEVRKMTLDRSEYTSLIPNLRNVVALDTEVASN---RIYWSDLSQRMICSTQLDRAHGV-----SSYDTVISRDIQAPDG 475 (791)
T ss_dssp SSEEEECTTSCCCEEEECSCSSEEEEEEETTTT---EEEEEETTTTEEEEEEC-------------CEEEECSSCSCCCE
T ss_pred cceeEeeccCCcceeeecCCCceEEEeecccCC---eeEEeeccceeEEEEeccCCCCC-----cceeEEEecCCCCcce
Confidence 456666665433233333445677888876443 34556666788988887642110 0011122223344667
Q ss_pred EEEeCCC-CEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccccccccccc-CCccceEEEEe-CCCCeEE
Q 036314 125 IAAETSG-NMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLV-GHTQCVSSVVW-PQQETIY 201 (347)
Q Consensus 125 v~~s~~~-~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~-~~~~~l~ 201 (347)
|++.+.+ ++.++-...+.|.+.++.... ..++. ..-.....|++ +....|+
T Consensus 476 LAvD~~~~~LY~tD~~~~~I~v~~ldG~~--------------------------~~~l~~~~l~~P~gIaVDp~~g~LY 529 (791)
T 3m0c_C 476 LAVDWIHSNIYWTDSVLGTVSVADTKGVK--------------------------RKTLFRENGSKPRAIVVDPVHGFMY 529 (791)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSSS--------------------------EEEEEECTTCCEEEEEEETTTTEEE
T ss_pred eeeeecCCcEEEEecCCCeEEEEeCCCCe--------------------------EEEEEeCCCCCcceEEEecCCCCEE
Confidence 8998776 455666777889888875321 00110 11122456666 4555665
Q ss_pred EEecC--CcEEEEECCCCceeeeeeeC--eeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecC--CCCCe
Q 036314 202 SASWD--HSVRTWDVEMGKDLSDIFCG--KALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSS--HNSWI 275 (347)
Q Consensus 202 s~s~d--g~v~vwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~--h~~~v 275 (347)
-+.+. +.|.+.++.. .....+... .....+++.+.++.++.+-...+.|..+|+..... ...+.. .....
T Consensus 530 wtD~g~~~~I~~~~~dG-~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~---~~v~~~~~~l~~P 605 (791)
T 3m0c_C 530 WTDWGTPAKIKKGGLNG-VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR---KTILEDEKRLAHP 605 (791)
T ss_dssp EEECSSSCEEEEEETTS-CCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC---EEEEECTTTTSSE
T ss_pred EecCCCCCeEEEEecCC-CceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCce---EEEecCCCccCCC
Confidence 55432 5677777753 333333222 34677888877777777767778999999864221 222222 12234
Q ss_pred eEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeec
Q 036314 276 SACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVID 312 (347)
Q Consensus 276 ~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~ 312 (347)
..+++.. .++.++-...+.|...|..+++.+.++.
T Consensus 606 ~glav~~--~~lYwtD~~~~~I~~~dk~tG~~~~~l~ 640 (791)
T 3m0c_C 606 FSLAVFE--DKVFWTDIINEAIFSANRLTGSDVNLLA 640 (791)
T ss_dssp EEEEEET--TEEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred CEEEEeC--CEEEEEECCCCEEEEEeCCCCcceEEee
Confidence 4566533 3556666677888888877776555543
No 275
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.25 E-value=0.08 Score=45.62 Aligned_cols=231 Identities=10% Similarity=0.013 Sum_probs=126.3
Q ss_pred CeEEEEcCCCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEE
Q 036314 45 NLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHS 124 (347)
Q Consensus 45 ~~i~iw~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~ 124 (347)
..|+..++.+.....+........+++|.+..+ ....+-...+.|..+++...... . .....+...-.....
T Consensus 10 ~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~---~ly~~D~~~~~I~~~~~~g~~~~---~--~~~~~~~~~~~~p~g 81 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIPNLRNVVALDTEVASN---RIYWSDLSQRMICSTQLDRAHGV---S--SYDTVISRDIQAPDG 81 (316)
T ss_dssp SSEEEEETTSCCCEEEECSCSSEEEEEEETTTT---EEEEEETTTTEEEEEEC-------------CEEEECSSCSCCCE
T ss_pred CeEEEEECCCcceEehhcCCCceEEEEEEeCCC---EEEEEECCCCcEEEEECCCCCCC---c--ccEEEEeCCCCCcCE
Confidence 357777765432222222344567888887543 34566667789999988651000 0 001112222234567
Q ss_pred EEEeCCC-CEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CCCCeEEE
Q 036314 125 IAAETSG-NMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYS 202 (347)
Q Consensus 125 v~~s~~~-~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s 202 (347)
+++++.+ ++.++-...+.|.+.+...... .. + +...-.....++. |.+..|+.
T Consensus 82 lavd~~~~~ly~~d~~~~~I~~~~~~g~~~----~~-------------------~--~~~~~~~P~~iavdp~~g~ly~ 136 (316)
T 1ijq_A 82 LAVDWIHSNIYWTDSVLGTVSVADTKGVKR----KT-------------------L--FRENGSKPRAIVVDPVHGFMYW 136 (316)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSSSE----EE-------------------E--EECTTCCEEEEEEETTTTEEEE
T ss_pred EEEeecCCeEEEEECCCCEEEEEeCCCCce----EE-------------------E--EECCCCCcceEEeCCCCCEEEE
Confidence 8888654 5556667788899988653210 00 0 0001122355665 45666655
Q ss_pred EecC--CcEEEEECCCCceeeeeee--CeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEE
Q 036314 203 ASWD--HSVRTWDVEMGKDLSDIFC--GKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISAC 278 (347)
Q Consensus 203 ~s~d--g~v~vwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v 278 (347)
+... +.|...++. +.....+.. -.....+++++.++.+..+-...+.|..+|+... ....+............+
T Consensus 137 ~d~~~~~~I~~~~~d-G~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~-~~~~~~~~~~~~~~P~gi 214 (316)
T 1ijq_A 137 TDWGTPAKIKKGGLN-GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG-NRKTILEDEKRLAHPFSL 214 (316)
T ss_dssp EECSSSCEEEEEETT-SCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEEECTTTTSSEEEE
T ss_pred EccCCCCeEEEEcCC-CCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCC-ceEEEeecCCccCCcEEE
Confidence 5443 577777764 333332321 1245678888777777777777889999998632 111111111122344566
Q ss_pred EeCCCCCeEEEEEeCCCcEEEEEcCCCccceeec
Q 036314 279 KWHNKSWFHLISASYDGKVMLWDLRTAWPLSVID 312 (347)
Q Consensus 279 ~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~ 312 (347)
++.. .++.++-...+.|..+|..+++.+..+.
T Consensus 215 av~~--~~ly~~d~~~~~V~~~~~~~g~~~~~i~ 246 (316)
T 1ijq_A 215 AVFE--DKVFWTDIINEAIFSANRLTGSDVNLLA 246 (316)
T ss_dssp EEET--TEEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred EEEC--CEEEEEECCCCeEEEEeCCCCcceEEEe
Confidence 6642 3567777778899999987776555543
No 276
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.22 E-value=0.083 Score=45.17 Aligned_cols=236 Identities=11% Similarity=0.030 Sum_probs=119.1
Q ss_pred CceeeccCC-CCCEEEEEecCCeEEEEcCCCeEEEEeeccCCceEEEEEeecCCCceEEEEEcc-CCC-cEEEEeccccc
Q 036314 25 DWVSAVDGS-NPGFILTGCYDNLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATAS-KDQ-TLRLWKFDAEE 101 (347)
Q Consensus 25 ~~v~~~~~~-~~~~l~sg~~d~~i~iw~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s-~Dg-~v~~wd~~~~~ 101 (347)
.....++++ ++.++++-..++.|..|+..+.....+. -.+....+++.+++. .+++.. .++ .|..++..+++
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~~~~~-~~~~p~gia~~~dG~----l~vad~~~~~~~v~~~d~~~g~ 106 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQIHAT-VEGKVSGLAFTSNGD----LVATGWNADSIPVVSLVKSDGT 106 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEEE-CSSEEEEEEECTTSC----EEEEEECTTSCEEEEEECTTSC
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCceEEEEe-CCCCceeEEEcCCCc----EEEEeccCCcceEEEEcCCCCe
Confidence 345556665 4556666667889999998775544333 234578888877442 334333 332 35555655543
Q ss_pred cccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccccccccc
Q 036314 102 LVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAIST 181 (347)
Q Consensus 102 ~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (347)
+. .+..+. .......++..+++..+++-..++.|.++|...... . ....... . .. ..
T Consensus 107 ~~-------~~~~~~-~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~--~-v~~~~~~---------~--~~-~~ 163 (306)
T 2p4o_A 107 VE-------TLLTLP-DAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSG--S-IWLEHPM---------L--AR-SN 163 (306)
T ss_dssp EE-------EEEECT-TCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEE--E-EEEECGG---------G--SC-SS
T ss_pred EE-------EEEeCC-CccccCcccccCCCcEEEEECCCCeEEEEeCCCCcE--e-EEEECCc---------c--cc-cc
Confidence 21 111111 112233444455555555555678887777543200 0 0000000 0 00 00
Q ss_pred ccCCccceEEEEeCCCCeEE-EEecCCcEEEEECCC-Cce--eeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCC
Q 036314 182 LVGHTQCVSSVVWPQQETIY-SASWDHSVRTWDVEM-GKD--LSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPR 257 (347)
Q Consensus 182 ~~~h~~~v~~~~~~~~~~l~-s~s~dg~v~vwd~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~ 257 (347)
..+.-...+.+ .++++.|+ +-...+.|.++|+.. +.. ...+........+++.+++ ++.++....+.|.++|..
T Consensus 164 ~~~~~~~pngi-s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG-~l~va~~~~~~V~~~~~~ 241 (306)
T 2p4o_A 164 SESVFPAANGL-KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEG-NLYGATHIYNSVVRIAPD 241 (306)
T ss_dssp TTCCSCSEEEE-EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTC-CEEEECBTTCCEEEECTT
T ss_pred ccCCCCcCCCc-CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCC-CEEEEeCCCCeEEEECCC
Confidence 00001122334 35666554 445667899999864 321 1111111223456666554 566776667899999864
Q ss_pred CCCCCCCeEEecCCCCCeeEEEeC---CCCCeEEEEEe
Q 036314 258 KPGTSAPVFQFSSHNSWISACKWH---NKSWFHLISAS 292 (347)
Q Consensus 258 ~~~~~~~~~~~~~h~~~v~~v~~s---~~~~~~l~s~s 292 (347)
+....+..+........+++|. |++.+++++.+
T Consensus 242 --G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 242 --RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp --CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred --CCEEEEeecccccCCceEEEEecccCCCCEEEEECC
Confidence 2211121233334568899998 78766555544
No 277
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.11 E-value=0.11 Score=44.79 Aligned_cols=224 Identities=12% Similarity=0.036 Sum_probs=127.1
Q ss_pred CeEEEEcCCCe--EEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccce
Q 036314 45 NLGRVWKAGGV--CTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASV 122 (347)
Q Consensus 45 ~~i~iw~~~~~--~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V 122 (347)
..|+..++.+. ....+........+++|.+..+ ....+-...+.|..++++.+.. ....+...-...
T Consensus 13 ~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~---~lyw~D~~~~~I~r~~~~g~~~--------~~~~~~~~l~~p 81 (318)
T 3sov_A 13 RDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHG---LIYWSDVSEEAIKRTEFNKTES--------VQNVVVSGLLSP 81 (318)
T ss_dssp EEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGT---EEEEEETTTTEEEEEETTSSSC--------CCEEEEECCSCC
T ss_pred CeEEEEECCCCceEEEEEecCCCccEEEEEEeCCC---EEEEEECCCCcEEEEEccCCCc--------eEEEEcCCCCCc
Confidence 56788877542 1122222223467888887433 3456667778899998865421 001111222345
Q ss_pred EEEEEeCC-CCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccc-cCCccceEEEEe-CCCCe
Q 036314 123 HSIAAETS-GNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTL-VGHTQCVSSVVW-PQQET 199 (347)
Q Consensus 123 ~~v~~s~~-~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~-~~~~~ 199 (347)
..+++.+. +.+.++-...+.|.++++..... ..+ ...-..-..+++ +.+..
T Consensus 82 ~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~--------------------------~~l~~~~~~~P~giavdp~~g~ 135 (318)
T 3sov_A 82 DGLACDWLGEKLYWTDSETNRIEVSNLDGSLR--------------------------KVLFWQELDQPRAIALDPSSGF 135 (318)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSCSC--------------------------EEEECSSCSSEEEEEEEGGGTE
T ss_pred cEEEEEcCCCeEEEEECCCCEEEEEECCCCcE--------------------------EEEEeCCCCCccEEEEeCCCCE
Confidence 67888864 55666666778898888753210 000 011122345555 34455
Q ss_pred EEEEec--CCcEEEEECCCCceeeeeeeC--eeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCe
Q 036314 200 IYSASW--DHSVRTWDVEMGKDLSDIFCG--KALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWI 275 (347)
Q Consensus 200 l~s~s~--dg~v~vwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v 275 (347)
|+-+.+ .+.|...++.. .....+... ...+.+++++.++.+..+-...+.|..+|+..... ...+.+....-
T Consensus 136 ly~td~~~~~~I~r~~~dG-~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~---~~~~~~~~~~P 211 (318)
T 3sov_A 136 MYWTDWGEVPKIERAGMDG-SSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNR---QAVVKGSLPHP 211 (318)
T ss_dssp EEEEECSSSCEEEEEETTS-CSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC---EEEECSCCSCE
T ss_pred EEEEecCCCCEEEEEEcCC-CCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCce---EEEecCCCCCc
Confidence 555443 46677777643 222222211 23577888877777777777789999999863211 11222233445
Q ss_pred eEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceee
Q 036314 276 SACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVI 311 (347)
Q Consensus 276 ~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~ 311 (347)
..+++.. ..++++-...+.|..+|..+++....+
T Consensus 212 ~glav~~--~~lywtd~~~~~V~~~~~~~G~~~~~i 245 (318)
T 3sov_A 212 FALTLFE--DILYWTDWSTHSILACNKYTGEGLREI 245 (318)
T ss_dssp EEEEEET--TEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred eEEEEeC--CEEEEEecCCCeEEEEECCCCCceEEE
Confidence 5666643 356777777889999998777655544
No 278
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.09 E-value=0.15 Score=45.63 Aligned_cols=221 Identities=10% Similarity=0.013 Sum_probs=121.9
Q ss_pred CCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCC-EEEEeeCCCcEEEEecCCCCCCCccceeeeccCC
Q 036314 88 KDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGN-MVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGN 166 (347)
Q Consensus 88 ~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~-~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~ 166 (347)
....|+..+++..+. ..+......+..++|++.+. +.++-...+.|+.+++.........
T Consensus 90 ~~~~I~~i~l~~~~~----------~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~--------- 150 (400)
T 3p5b_L 90 NRHEVRKMTLDRSEY----------TSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSY--------- 150 (400)
T ss_dssp ETTEEEEECTTSCSC----------EEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCC---------
T ss_pred ccceeEEEccCCcce----------eEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcc---------
Confidence 346788888765421 11223345678899998554 5556666788888877532100000
Q ss_pred CccccccccccccccccCCccceEEEEeC-CCCeE-EEEecCCcEEEEECCCCceeeeee-eCeeeEEEEeeCCCCcEEE
Q 036314 167 NQVEEPQLEGEAISTLVGHTQCVSSVVWP-QQETI-YSASWDHSVRTWDVEMGKDLSDIF-CGKALNCIDIGGEGSALIA 243 (347)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~l-~s~s~dg~v~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~la 243 (347)
...+.........+++. .++.| .+-...+.|.+.++........+. .......+++.+.++.++.
T Consensus 151 ------------~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~ 218 (400)
T 3p5b_L 151 ------------DTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYW 218 (400)
T ss_dssp ------------EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEE
T ss_pred ------------eEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEE
Confidence 00011111234556653 24444 444556788888876543222222 1234677888877666666
Q ss_pred Eec-CCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecC--CCCeEEE
Q 036314 244 AGG-SDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDS--HKDKVLC 320 (347)
Q Consensus 244 ~~~-~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~--h~~~v~~ 320 (347)
+-. ..+.|...++.... ....+.....+-..++++|++..+.++=+....|..+|++.......... .-....+
T Consensus 219 td~~~~~~I~~~~~dG~~---~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~g 295 (400)
T 3p5b_L 219 TDWGTPAKIKKGGLNGVD---IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFS 295 (400)
T ss_dssp EECSSSCCEEEEETTSCS---CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEE
T ss_pred EeCCCCCEEEEEeCCCCc---cEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEE
Confidence 543 34788888876321 12222333456788999988877666666778999999975432222221 2234455
Q ss_pred EeecCCCEEEEccCCceEEEee
Q 036314 321 ADWWRGDSVISGGVDSKLCVSS 342 (347)
Q Consensus 321 ~~~~~~~~l~s~s~D~~v~vw~ 342 (347)
++...+..+++-...+.|...+
T Consensus 296 l~v~~~~lywtd~~~~~V~~~~ 317 (400)
T 3p5b_L 296 LAVFEDKVFWTDIINEAIFSAN 317 (400)
T ss_dssp EEEETTEEEEEESSSCSEEEEE
T ss_pred EEEeCCEEEEecCCCCeEEEEE
Confidence 6654444555655556665543
No 279
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.00 E-value=0.24 Score=46.76 Aligned_cols=110 Identities=11% Similarity=0.019 Sum_probs=58.8
Q ss_pred CCEEEEEec-CCeEEEEcC--CCeEEEEeeccCCc-----------eEEEEEeecCCCceEEEEEccCCCcEEEEecccc
Q 036314 35 PGFILTGCY-DNLGRVWKA--GGVCTHILEGHCGA-----------VSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAE 100 (347)
Q Consensus 35 ~~~l~sg~~-d~~i~iw~~--~~~~~~~l~~h~~~-----------V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~ 100 (347)
++.|..++. ++.+.-+|. .|+.+..+...... ...+++.|.++.....|+.++.|+.|..+|..++
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence 455666666 888888987 57776655432210 1123443322211123677888999999998887
Q ss_pred ccccCccccceeeeeeccc--cceEEE-EEeCCCCEEEEee------CCCcEEEEecCCCCC
Q 036314 101 ELVNHPKKIRSFKILRGHK--ASVHSI-AAETSGNMVCSGS------WDCTISLWRTNDSDA 153 (347)
Q Consensus 101 ~~~~~~~~~~~~~~~~~h~--~~V~~v-~~s~~~~~l~sgs------~Dg~I~iwd~~~~~~ 153 (347)
+.+=. . .+..+. ..+.+- .+ .++. ++.++ .++.|+-+|..+++.
T Consensus 142 ~~~W~-----~--~~~~~~~~~~~~ssP~v-~~g~-V~vg~~g~e~g~~g~v~A~D~~TG~~ 194 (599)
T 1w6s_A 142 ETVWK-----V--ENSDIKVGSTLTIAPYV-VKDK-VIIGSSGAELGVRGYLTAYDVKTGEQ 194 (599)
T ss_dssp CEEEE-----E--ECCCGGGTCBCCSCCEE-ETTE-EEECCBCGGGTCCCEEEEEETTTCCE
T ss_pred CEEEe-----e--cCCCCCccceeecCCEE-ECCE-EEEEecccccCCCCeEEEEECCCCcE
Confidence 64310 0 011110 011110 11 1344 44444 489999999987653
No 280
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.00 E-value=0.013 Score=56.71 Aligned_cols=219 Identities=10% Similarity=0.021 Sum_probs=110.1
Q ss_pred CCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEE-EEeeCCCcEEEEecCCCCCCCccceeeeccCC
Q 036314 88 KDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMV-CSGSWDCTISLWRTNDSDAAGNQVSIKKRKGN 166 (347)
Q Consensus 88 ~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l-~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~ 166 (347)
..+.|+..++...+.. ..+.. ...+..++|++.+..| ++-...+.|+.+++.........
T Consensus 384 ~~~~I~~id~~~~~~~---------~~~~~-~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~--------- 444 (699)
T 1n7d_A 384 NRHEVRKMTLDRSEYT---------SLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSY--------- 444 (699)
T ss_dssp CTTC-CEECTTSCCEE---------CCSCC-CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCC---------
T ss_pred CccceEEEeCCCCcce---------eeecc-CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcce---------
Confidence 3456777777654321 11111 2345678898866555 45456678888887541000000
Q ss_pred CccccccccccccccccCCccceEEEEeC-CCCe-EEEEecCCcEEEEECCCCceeeeeee--CeeeEEEEeeCCCCcEE
Q 036314 167 NQVEEPQLEGEAISTLVGHTQCVSSVVWP-QQET-IYSASWDHSVRTWDVEMGKDLSDIFC--GKALNCIDIGGEGSALI 242 (347)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~-l~s~s~dg~v~vwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l 242 (347)
...+...-.....+++. .++. +++-...+.|.+.++.... ...+.. ......+++.+.++.++
T Consensus 445 ------------~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~-~~~l~~~~~~~P~giavDp~~g~ly 511 (699)
T 1n7d_A 445 ------------DTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK-RKTLFREQGSKPRAIVVDPVHGFMY 511 (699)
T ss_dssp ------------CCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCC-EEEECCCSSCCCCCEECCSSSSCCE
T ss_pred ------------EEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCc-eEEEEeCCCCCcceEEEccCCCcEE
Confidence 00000000112234542 3333 4444556788888876443 222221 12345677776666655
Q ss_pred EEecCC-CcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecC---CCCeE
Q 036314 243 AAGGSD-PILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDS---HKDKV 318 (347)
Q Consensus 243 a~~~~d-~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~---h~~~v 318 (347)
.+-... +.|..+++.... .. ..+.....+-..++|+|++.++.++-+..+.|.++|++... ..++.. .-...
T Consensus 512 ~td~~~~~~I~~~~~dG~~--~~-~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~-~~~~~~~~~~~~~P 587 (699)
T 1n7d_A 512 WTDWGTPAKIKKGGLNGVD--IY-SLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-RKTILEDEKRLAHP 587 (699)
T ss_dssp ECCCSSSCCEEBCCSSSCC--CC-EESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSC-CEEECCCSSSCSSC
T ss_pred EcccCCCCeEEEEeCCCCC--ee-EEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCc-eEEEEecCCcCCCc
Confidence 554333 678888765321 11 11122234556799999877767777778899999997432 222211 11122
Q ss_pred EEEeecCCCEEEEccCCceEEEee
Q 036314 319 LCADWWRGDSVISGGVDSKLCVSS 342 (347)
Q Consensus 319 ~~~~~~~~~~l~s~s~D~~v~vw~ 342 (347)
.++++..+..+++....+.|...+
T Consensus 588 ~glavd~~~lywtd~~~~~V~~~d 611 (699)
T 1n7d_A 588 FSLAVFEDKVFWTDIINEAIFSAN 611 (699)
T ss_dssp CCCEEETTEEEEECSTTTCEEEEE
T ss_pred eEeEEECCEEEEEeCCCCeEEEEE
Confidence 333333334455555556665554
No 281
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.92 E-value=0.0068 Score=58.64 Aligned_cols=231 Identities=9% Similarity=0.007 Sum_probs=116.6
Q ss_pred CeEEEEcCCCeEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEE
Q 036314 45 NLGRVWKAGGVCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHS 124 (347)
Q Consensus 45 ~~i~iw~~~~~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~ 124 (347)
+.|+..++.+.....+......+..|+|.+..+ .+..+-...+.|+.+++...... . .....+.........
T Consensus 386 ~~I~~id~~~~~~~~~~~~~~~p~gla~d~~~~---~Ly~sD~~~~~I~~~~~~g~~~~---~--~~~~~i~~~~~~P~g 457 (699)
T 1n7d_A 386 HEVRKMTLDRSEYTSLIPNLRNVVALDTEVASN---RIYWSDLSQRMICSTQLDRAHGV---S--SYDTVISRDIQAPDG 457 (699)
T ss_dssp TC-CEECTTSCCEECCSCCCTTCCCCEEETTTT---EEEECCTTTTSBEEEESCCCCC----C--CCCCBCCSCC--CCC
T ss_pred cceEEEeCCCCcceeeeccCcceEEEccccccC---eEEEEecCCCeEEEEecCCCCCC---c--ceEEEEeCCCCCcce
Confidence 466666765433322222234456788876443 34455566788999988641000 0 000111111122345
Q ss_pred EEEeCC-CCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CCCCeEEE
Q 036314 125 IAAETS-GNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYS 202 (347)
Q Consensus 125 v~~s~~-~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s 202 (347)
+++.+. ++++++-...+.|.+.++..... ..+ +.........+++ +.+..|+.
T Consensus 458 lavD~~~g~LY~tD~~~~~I~v~d~dg~~~----~~l---------------------~~~~~~~P~giavDp~~g~ly~ 512 (699)
T 1n7d_A 458 LAVDWIHSNIYWTDSVLGTVSVADTKGVKR----KTL---------------------FREQGSKPRAIVVDPVHGFMYW 512 (699)
T ss_dssp EECCCSSSBCEECCTTTSCEEEEBSSSCCE----EEE---------------------CCCSSCCCCCEECCSSSSCCEE
T ss_pred EEEEeeCCcEEEEeccCCeEEEEecCCCce----EEE---------------------EeCCCCCcceEEEccCCCcEEE
Confidence 788754 45556666678898888653210 000 0000011234454 33444444
Q ss_pred EecC--CcEEEEECCCCceeeeeee--CeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEE
Q 036314 203 ASWD--HSVRTWDVEMGKDLSDIFC--GKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISAC 278 (347)
Q Consensus 203 ~s~d--g~v~vwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v 278 (347)
+.+. +.|.+.++... ....+.. -...+.+++.+.++.++.+-...+.|..+|+.... ...+............+
T Consensus 513 td~~~~~~I~~~~~dG~-~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~-~~~~~~~~~~~~~P~gl 590 (699)
T 1n7d_A 513 TDWGTPAKIKKGGLNGV-DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-RKTILEDEKRLAHPFSL 590 (699)
T ss_dssp CCCSSSCCEEBCCSSSC-CCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSC-CEEECCCSSSCSSCCCC
T ss_pred cccCCCCeEEEEeCCCC-CeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCc-eEEEEecCCcCCCceEe
Confidence 3322 56777665432 2222211 12345688887777787777778899999986321 11111111111223344
Q ss_pred EeCCCCCeEEEEEeCCCcEEEEEcCCCccceeec
Q 036314 279 KWHNKSWFHLISASYDGKVMLWDLRTAWPLSVID 312 (347)
Q Consensus 279 ~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~ 312 (347)
++..+ +++++....+.|..+|..+++.+.++.
T Consensus 591 avd~~--~lywtd~~~~~V~~~d~~~G~~~~~i~ 622 (699)
T 1n7d_A 591 AVFED--KVFWTDIINEAIFSANRLTGSDVNLLA 622 (699)
T ss_dssp EEETT--EEEEECSTTTCEEEEETTTEEEEECCC
T ss_pred EEECC--EEEEEeCCCCeEEEEEccCCCceEEee
Confidence 55433 567777778899999987776555543
No 282
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.92 E-value=0.043 Score=49.66 Aligned_cols=154 Identities=10% Similarity=0.101 Sum_probs=88.5
Q ss_pred eEEEEEeC-CCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CCCCe
Q 036314 122 VHSIAAET-SGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQET 199 (347)
Q Consensus 122 V~~v~~s~-~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~ 199 (347)
...++++| ++..|+.+...+.|+.+|..... +..+.........+++ ++++.
T Consensus 139 P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~--------------------------v~~~~~~~~~P~~ia~d~~G~~ 192 (430)
T 3tc9_A 139 AVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEY--------------------------VSTVYSGLSKVRTICWTHEADS 192 (430)
T ss_dssp CCEEEEETTEEEEEEEEEBTEEEEEEETTTTE--------------------------EEEEECCCSCEEEEEECTTSSE
T ss_pred CCEEEECCCCCCeEEEEeCCCcEEEEECCCCE--------------------------EEEEecCCCCcceEEEeCCCCE
Confidence 46788997 34555555554788888875421 1111112233566777 45665
Q ss_pred EEEEecC-C----cEEEEECCCCcee--eeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCC
Q 036314 200 IYSASWD-H----SVRTWDVEMGKDL--SDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHN 272 (347)
Q Consensus 200 l~s~s~d-g----~v~vwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~ 272 (347)
|+.+... + .+.+.+ ..+... ..+........+++++.++.++++-..++.|..+|+.... ...+... +..
T Consensus 193 lyvad~~~~~~~~~v~~~~-~~g~~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~-~~~~~~~-~~~ 269 (430)
T 3tc9_A 193 MIITNDQNNNDRPNNYILT-RESGFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQE-TTPLFTI-QDS 269 (430)
T ss_dssp EEEEECCSCTTSEEEEEEE-GGGTSCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTE-EEEEEEC-SSS
T ss_pred EEEEeCCCCcccceEEEEe-CCCceeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCc-EEEEEEc-CCC
Confidence 6655542 2 233333 333222 2222223345677777566777777778899999976321 1012222 222
Q ss_pred CCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCC
Q 036314 273 SWISACKWHNKSWFHLISASYDGKVMLWDLRT 304 (347)
Q Consensus 273 ~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~ 304 (347)
.+-..++|+|++.+++++-...+.|..++.+.
T Consensus 270 ~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 270 GWEFHIQFHPSGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp SCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred CcceeEEEcCCCCEEEEEECCCCEEEEEeCCc
Confidence 45678999999986677777888999988763
No 283
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.75 E-value=0.26 Score=43.18 Aligned_cols=108 Identities=13% Similarity=-0.043 Sum_probs=55.8
Q ss_pred ceeeccCCCCCEEEEEecCCeEEEEcCCCeEE--EEe---eccCCceEEEEEeecCCCceEEEEEccCC-----CcEEEE
Q 036314 26 WVSAVDGSNPGFILTGCYDNLGRVWKAGGVCT--HIL---EGHCGAVSSVNIIKSDGLKYVTVATASKD-----QTLRLW 95 (347)
Q Consensus 26 ~v~~~~~~~~~~l~sg~~d~~i~iw~~~~~~~--~~l---~~h~~~V~~v~~~~~~~~~~~~l~s~s~D-----g~v~~w 95 (347)
.-+.+++.+++.|..+..++.|++++ .+... ..+ ..-......|+++|+-...+...++-+.. +.|..|
T Consensus 32 ~P~~ia~~pdG~l~V~e~~g~I~~i~-~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~ 110 (352)
T 2ism_A 32 VPWALAFLPDGGMLIAERPGRIRLFR-EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRL 110 (352)
T ss_dssp CEEEEEECTTSCEEEEETTTEEEEEE-TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEE
T ss_pred CceEEEEcCCCeEEEEeCCCeEEEEE-CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEE
Confidence 34567776444344445679999988 44322 111 11234578899988521112233333332 567778
Q ss_pred eccccccccCccccce-eeeee---ccccceEEEEEeCCCCEEEEee
Q 036314 96 KFDAEELVNHPKKIRS-FKILR---GHKASVHSIAAETSGNMVCSGS 138 (347)
Q Consensus 96 d~~~~~~~~~~~~~~~-~~~~~---~h~~~V~~v~~s~~~~~l~sgs 138 (347)
+...+++. ..+. +..+. +.......++|.|||.+.++-+
T Consensus 111 ~~~~~~~~----~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 111 RHLGERGV----LDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EECSSCEE----EEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred EeCCCCcC----ceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 77643211 1111 11122 1111235789999998777644
No 284
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.74 E-value=0.49 Score=46.28 Aligned_cols=217 Identities=9% Similarity=0.018 Sum_probs=116.8
Q ss_pred CCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCC-CCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCC
Q 036314 89 DQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETS-GNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNN 167 (347)
Q Consensus 89 Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~-~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~ 167 (347)
...|+..++...+. ..+......+..++|++. +.++++-...+.|+.+++.........
T Consensus 403 ~~~Ir~i~l~~~~~----------~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~---------- 462 (791)
T 3m0c_C 403 RHEVRKMTLDRSEY----------TSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSY---------- 462 (791)
T ss_dssp BSSEEEECTTSCCC----------EEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------C----------
T ss_pred ccceeEeeccCCcc----------eeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcce----------
Confidence 34677777654321 122223455778999885 455566666788888877532100000
Q ss_pred ccccccccccccccccCCccceEEEEeC-CCCe-EEEEecCCcEEEEECCCCceeeeeee--CeeeEEEEeeCCCCcEEE
Q 036314 168 QVEEPQLEGEAISTLVGHTQCVSSVVWP-QQET-IYSASWDHSVRTWDVEMGKDLSDIFC--GKALNCIDIGGEGSALIA 243 (347)
Q Consensus 168 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~-l~s~s~dg~v~vwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~la 243 (347)
...+...-.....|++. .++. +++-...+.|.+.++.... ...+.. ......+++.+..+.++.
T Consensus 463 -----------~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~-~~~l~~~~l~~P~gIaVDp~~g~LYw 530 (791)
T 3m0c_C 463 -----------DTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK-RKTLFRENGSKPRAIVVDPVHGFMYW 530 (791)
T ss_dssp -----------EEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSS-EEEEEECTTCCEEEEEEETTTTEEEE
T ss_pred -----------eEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCe-EEEEEeCCCCCcceEEEecCCCCEEE
Confidence 00011011123345552 3444 4455566789999986433 333322 234678888877676666
Q ss_pred EecC-CCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecC--CCCeEEE
Q 036314 244 AGGS-DPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDS--HKDKVLC 320 (347)
Q Consensus 244 ~~~~-d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~--h~~~v~~ 320 (347)
+-.. .+.|...++... . ....+.....+...|++++.+..+.++=.....|...|++.......+.. .-....+
T Consensus 531 tD~g~~~~I~~~~~dG~--~-~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~g 607 (791)
T 3m0c_C 531 TDWGTPAKIKKGGLNGV--D-IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFS 607 (791)
T ss_dssp EECSSSCEEEEEETTSC--C-EEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEE
T ss_pred ecCCCCCeEEEEecCCC--c-eEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCE
Confidence 6433 378888887632 1 12223333457788999987776666656678899999975433222222 1223445
Q ss_pred EeecCCCEEEEccCCceEEE
Q 036314 321 ADWWRGDSVISGGVDSKLCV 340 (347)
Q Consensus 321 ~~~~~~~~l~s~s~D~~v~v 340 (347)
++...+..+++-...+.|..
T Consensus 608 lav~~~~lYwtD~~~~~I~~ 627 (791)
T 3m0c_C 608 LAVFEDKVFWTDIINEAIFS 627 (791)
T ss_dssp EEEETTEEEEEETTTTEEEE
T ss_pred EEEeCCEEEEEECCCCEEEE
Confidence 55544444555444455443
No 285
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=96.72 E-value=0.42 Score=45.18 Aligned_cols=26 Identities=19% Similarity=0.081 Sum_probs=22.0
Q ss_pred EEEEEeCCCcEEEEEcCCCccceeec
Q 036314 287 HLISASYDGKVMLWDLRTAWPLSVID 312 (347)
Q Consensus 287 ~l~s~s~D~~i~lwd~~~~~~~~~~~ 312 (347)
++..++.|+.++.||.++|+.+-+++
T Consensus 486 ~vf~gt~dg~l~A~D~~tG~~lW~~~ 511 (599)
T 1w6s_A 486 LVFYGTLDGYLKARDSDTGDLLWKFK 511 (599)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred EEEEECCCCeEEEEECCCCCEEEEee
Confidence 46678999999999999998876664
No 286
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.54 E-value=0.079 Score=47.91 Aligned_cols=150 Identities=11% Similarity=0.050 Sum_probs=86.2
Q ss_pred EEEEeC--CCCeEEEEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCC----cEEEEeCCCCCCCC
Q 036314 190 SSVVWP--QQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDP----ILRIWDPRKPGTSA 263 (347)
Q Consensus 190 ~~~~~~--~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~----~i~iwd~~~~~~~~ 263 (347)
..+++. +++.|+.+...+.|+.+|+..+..............+++++++..++++...++ .+..++... ...
T Consensus 140 ~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g--~~~ 217 (430)
T 3tc9_A 140 VWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRES--GFK 217 (430)
T ss_dssp CEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGG--TSC
T ss_pred CEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCC--cee
Confidence 345654 356677666658899999876553322222345677888776654666554332 344444321 122
Q ss_pred CeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeec-CCCCeEEEEeecC-CC-EEEEccCCceEEE
Q 036314 264 PVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVID-SHKDKVLCADWWR-GD-SVISGGVDSKLCV 340 (347)
Q Consensus 264 ~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~-~h~~~v~~~~~~~-~~-~l~s~s~D~~v~v 340 (347)
....+.. ......++++|++.+++++-..++.|..+|.+.+....... +.......++|++ |+ .+++-...+.|..
T Consensus 218 ~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~ 296 (430)
T 3tc9_A 218 VITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILR 296 (430)
T ss_dssp SEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEE
T ss_pred eeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEE
Confidence 1122321 23356688999544556666677899999998654322221 1123457889975 66 4566666777777
Q ss_pred ee
Q 036314 341 SS 342 (347)
Q Consensus 341 w~ 342 (347)
++
T Consensus 297 ~~ 298 (430)
T 3tc9_A 297 SD 298 (430)
T ss_dssp EE
T ss_pred Ee
Confidence 54
No 287
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.46 E-value=0.63 Score=44.14 Aligned_cols=225 Identities=13% Similarity=0.084 Sum_probs=119.1
Q ss_pred CCeEEEEcCCCe--EEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccc
Q 036314 44 DNLGRVWKAGGV--CTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKAS 121 (347)
Q Consensus 44 d~~i~iw~~~~~--~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~ 121 (347)
...|+.-++.+. ....+........+|+|.+..+ ....+-...+.|+.++++.... ....+..-...
T Consensus 17 ~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~---~ly~sD~~~~~I~r~~~~g~~~--------~~~v~~~~~~~ 85 (619)
T 3s94_A 17 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHG---LIYWSDVSEEAIKRTEFNKTES--------VQNVVVSGLLS 85 (619)
T ss_dssp SSBEEEECCC---------CBCCSCEEEEEEETTTT---EEEEEETTTTEEEEEEC-------------CEEEECSSCSC
T ss_pred cccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCC---EEEEEECCCCeEEEEEccCCCc--------eEEEEeCCCCC
Confidence 346777776543 2223333445577889987544 3445556667888888764310 01122222245
Q ss_pred eEEEEEeCCC-CEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccccccccccc-CCccceEEEEe-CCCC
Q 036314 122 VHSIAAETSG-NMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLV-GHTQCVSSVVW-PQQE 198 (347)
Q Consensus 122 V~~v~~s~~~-~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~-~~~~ 198 (347)
...+++++.+ ++.++-...+.|.+.++..... ..+. ..-..-..+++ |.+.
T Consensus 86 P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~--------------------------~~l~~~~l~~P~~Iavdp~~g 139 (619)
T 3s94_A 86 PDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR--------------------------KVLFWQELDQPRAIALDPSSG 139 (619)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSC--------------------------EEEECSSCSCCCCEEEETTTT
T ss_pred cCeEEEEecCCEEEEEeCCCCEEEEEECCCCCE--------------------------EEEEeCCCCCCceEEEecCCC
Confidence 7889999855 4556666778999988753210 0000 01111234555 4455
Q ss_pred eEEEEecC--CcEEEEECCCCceeeeeee--CeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCC
Q 036314 199 TIYSASWD--HSVRTWDVEMGKDLSDIFC--GKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSW 274 (347)
Q Consensus 199 ~l~s~s~d--g~v~vwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~ 274 (347)
.|+-+.+. +.|...++. |.....+.. ....+.+++++.++.+..+-...+.|..+|+...... .+ ..+....
T Consensus 140 ~ly~tD~g~~~~I~r~~~d-G~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~-~~--~~~~~~~ 215 (619)
T 3s94_A 140 FMYWTDWGEVPKIERAGMD-GSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQ-AV--VKGSLPH 215 (619)
T ss_dssp EEEEEECSSSCEEEEEETT-SCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC------------
T ss_pred eEEEeccCCCCEEEEEECC-CCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccE-EE--EeCCCCC
Confidence 56555443 455555553 332222221 2245778888777777777777889999998642211 11 1111222
Q ss_pred eeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceee
Q 036314 275 ISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVI 311 (347)
Q Consensus 275 v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~ 311 (347)
-..+++..+ .+.++-...+.|...|..+++....+
T Consensus 216 P~gi~~~~~--~ly~td~~~~~V~~~d~~tg~~~~~i 250 (619)
T 3s94_A 216 PFALTLFED--ILYWTDWSTHSILACNKYTGEGLREI 250 (619)
T ss_dssp CCCEEESSS--EEEEECTTTCSEEEEESSSCCCCEEC
T ss_pred ceEEEEeCC--EEEEecCCCCEEEEEECCCCcccEEE
Confidence 235666544 45666667788999998877654443
No 288
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.40 E-value=0.43 Score=41.56 Aligned_cols=112 Identities=8% Similarity=0.079 Sum_probs=67.3
Q ss_pred eEEEEecCCcEEEEECC-------CCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCC--CCCCeEEec
Q 036314 199 TIYSASWDHSVRTWDVE-------MGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPG--TSAPVFQFS 269 (347)
Q Consensus 199 ~l~s~s~dg~v~vwd~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~--~~~~~~~~~ 269 (347)
+++....+|.+..|++. +.+.++++..+..+..+...+..+ .|..+-++..|..+|.+... ....+..+.
T Consensus 145 yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g-~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~ 223 (355)
T 3amr_A 145 YAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYG-RLYIAEEDEAIWKFSAEPDGGSNGTVIDRAD 223 (355)
T ss_dssp EEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTT-EEEEEETTTEEEEEECSTTSCSCCEEEEEBS
T ss_pred EEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCC-eEEEecccceEEEEeCCcCCCCCceEEEEec
Confidence 57777888999999883 224456666555666666655444 55667777667777754322 111222221
Q ss_pred -CCC-CCeeEEEe--CCCCC-eEEEEEeCCCcEEEEEcC-CCccceee
Q 036314 270 -SHN-SWISACKW--HNKSW-FHLISASYDGKVMLWDLR-TAWPLSVI 311 (347)
Q Consensus 270 -~h~-~~v~~v~~--s~~~~-~~l~s~s~D~~i~lwd~~-~~~~~~~~ 311 (347)
++- .-+..++. .+++. ++|+|+-.+.+..+||.+ +.+.+..|
T Consensus 224 ~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f 271 (355)
T 3amr_A 224 GRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADF 271 (355)
T ss_dssp SSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEE
T ss_pred CCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEE
Confidence 222 24566665 45554 556666578899999997 55555555
No 289
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.32 E-value=0.73 Score=43.37 Aligned_cols=49 Identities=14% Similarity=0.037 Sum_probs=30.5
Q ss_pred CCcEEEEEcCCCccceeecCCCCeEEEEee-cCCCEEEEccCCceEEEeec
Q 036314 294 DGKVMLWDLRTAWPLSVIDSHKDKVLCADW-WRGDSVISGGVDSKLCVSSG 343 (347)
Q Consensus 294 D~~i~lwd~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~D~~v~vw~~ 343 (347)
+|.|.-||+++++.+=+...+ ..+..-.. -.+..+..++.|+.++.++.
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~-~~~~~g~~~tagglvf~g~~dg~l~A~D~ 514 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEH-LPLWAGVLATAGNLVFTGTGDGYFKAFDA 514 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEES-SCCCSCCEEETTTEEEEECTTSEEEEEET
T ss_pred cceEEEEECCCCCEEEEecCC-CCCcccceEeCCCEEEEECCCCcEEEEEC
Confidence 678999999998765433321 12111111 13667777889999988874
No 290
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.26 E-value=0.49 Score=40.80 Aligned_cols=230 Identities=10% Similarity=0.053 Sum_probs=110.1
Q ss_pred CCceeeccCCCCCEEEEEecCCeEEEEcCCCe-EEEEee--ccCCceEEEEEeecCCCceEEEEEccCCCcE-EEEeccc
Q 036314 24 DDWVSAVDGSNPGFILTGCYDNLGRVWKAGGV-CTHILE--GHCGAVSSVNIIKSDGLKYVTVATASKDQTL-RLWKFDA 99 (347)
Q Consensus 24 ~~~v~~~~~~~~~~l~sg~~d~~i~iw~~~~~-~~~~l~--~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v-~~wd~~~ 99 (347)
...+.++.+.++..++ ++.++.+..-.-.|+ ...... .+.+.+..+.+.+++ ..++. +.++.| |-.| .
T Consensus 79 ~~~~~~i~~~~~~~~~-~g~~g~i~~S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~----~~~~~-~~~g~v~~S~D--g 150 (327)
T 2xbg_A 79 DYRFNSVSFQGNEGWI-VGEPPIMLHTTDGGQSWSQIPLDPKLPGSPRLIKALGNG----SAEMI-TNVGAIYRTKD--S 150 (327)
T ss_dssp CCEEEEEEEETTEEEE-EEETTEEEEESSTTSSCEECCCCTTCSSCEEEEEEEETT----EEEEE-ETTCCEEEESS--T
T ss_pred CccEEEEEecCCeEEE-EECCCeEEEECCCCCCceECccccCCCCCeEEEEEECCC----CEEEE-eCCccEEEEcC--C
Confidence 3456777775533333 456665544332232 222211 234557777776532 23444 345544 2222 1
Q ss_pred cccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccccccc
Q 036314 100 EELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAI 179 (347)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (347)
+ +.++.. ..++...+..+++.+++.+++.+...+..+-+|-. +. .. +.+
T Consensus 151 G------~tW~~~--~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~g-G~----tW------------------~~~ 199 (327)
T 2xbg_A 151 G------KNWQAL--VQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPG-QT----AW------------------EPH 199 (327)
T ss_dssp T------SSEEEE--ECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTT-CS----SC------------------EEE
T ss_pred C------CCCEEe--ecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCC-CC----ce------------------eEC
Confidence 2 112222 12345578889999988877765443333333310 00 00 000
Q ss_pred ccccCCccceEEEEeCCCCeEEEEecCCcEEEEECCCCceeeeee-----eCeeeEEEEeeCCCCcEEEEecCCCcEEEE
Q 036314 180 STLVGHTQCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDIF-----CGKALNCIDIGGEGSALIAAGGSDPILRIW 254 (347)
Q Consensus 180 ~~~~~h~~~v~~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~la~~~~d~~i~iw 254 (347)
. ......+..+.+.....++.++.+|.+.+.+...++.-..+. ....+..+.+.++ ..+++++. ++.+. +
T Consensus 200 ~--~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~-~~~~~~g~-~g~i~-~ 274 (327)
T 2xbg_A 200 N--RTTSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTP-NEVWLAGG-AGALL-C 274 (327)
T ss_dssp E--CCSSSCEEEEEECTTSCEEEEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSS-SCEEEEES-TTCEE-E
T ss_pred C--CCCCCccceeEECCCCCEEEEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCC-CEEEEEeC-CCeEE-E
Confidence 0 112234556666433455566677877776422122222121 1123566666543 45655554 66663 3
Q ss_pred eCCCCCCCCCeEEec---CCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEc
Q 036314 255 DPRKPGTSAPVFQFS---SHNSWISACKWHNKSWFHLISASYDGKVMLWDL 302 (347)
Q Consensus 255 d~~~~~~~~~~~~~~---~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~ 302 (347)
....... ...+. .+...+.++.|.+++ .++.++.+|.|.-++-
T Consensus 275 S~DgG~t---W~~~~~~~~~~~~~~~v~~~~~~--~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 275 SQDGGQT---WQQDVDVKKVPSNFYKILFFSPD--QGFILGQKGILLRYVT 320 (327)
T ss_dssp ESSTTSS---CEECGGGTTSSSCCCEEEEEETT--EEEEECSTTEEEEECC
T ss_pred eCCCCcc---cEEcCccCCCCCCeEEEEEECCC--ceEEEcCCceEEEEcC
Confidence 3222222 22222 223456788886544 3677788898776654
No 291
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.12 E-value=0.98 Score=42.92 Aligned_cols=215 Identities=6% Similarity=-0.062 Sum_probs=120.5
Q ss_pred CCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCC-EEEEeeCCCcEEEEecCCCCCCCccceeeeccCC
Q 036314 88 KDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGN-MVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGN 166 (347)
Q Consensus 88 ~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~-~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~ 166 (347)
..+.|+.-+++..+. .....+ ..-..+..++|++.+. ++++-..++.|..+++...... .
T Consensus 13 ~~~~I~~i~l~~~~~-------~~~~~~-~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~----~------- 73 (628)
T 4a0p_A 13 RRADIRRISLETNNN-------NVAIPL-TGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALE----H------- 73 (628)
T ss_dssp ETTEEEEEESSCTTC-------EEECCC-CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE----E-------
T ss_pred eCCcEEEEECCCCCc-------ceEEEc-CCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcE----E-------
Confidence 456788888865321 011111 1234577899998655 4456667788888876532100 0
Q ss_pred CccccccccccccccccCCccceEEEEeC-CCCeE-EEEecCCcEEEEECCCCceeeeee--eCeeeEEEEeeCCCCcEE
Q 036314 167 NQVEEPQLEGEAISTLVGHTQCVSSVVWP-QQETI-YSASWDHSVRTWDVEMGKDLSDIF--CGKALNCIDIGGEGSALI 242 (347)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~l-~s~s~dg~v~vwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l 242 (347)
.+.........+++. .++.| .+-...+.|.+.++.... ...+. .-.....+++.|..+.++
T Consensus 74 --------------v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~-~~~l~~~~l~~P~~iavdp~~G~lY 138 (628)
T 4a0p_A 74 --------------VVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQH-RQVLVWKDLDSPRALALDPAEGFMY 138 (628)
T ss_dssp --------------EECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTT-CEEEECSSCCCEEEEEEETTTTEEE
T ss_pred --------------EEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCc-EEEEEeCCCCCcccEEEccCCCeEE
Confidence 000000122345542 33444 444556788888875433 22222 123457888887667666
Q ss_pred EEe-cCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceeecCCCCeEEEE
Q 036314 243 AAG-GSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSHKDKVLCA 321 (347)
Q Consensus 243 a~~-~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h~~~v~~~ 321 (347)
.+- +..+.|...++.... ...+.....+...+++++++..+.++=...+.|...|++.... ..+...-....++
T Consensus 139 ~tD~g~~~~I~r~~~dG~~----~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~gl 213 (628)
T 4a0p_A 139 WTEWGGKPKIDRAAMDGSE----RTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGL 213 (628)
T ss_dssp EEECSSSCEEEEEETTSCS----CEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEE
T ss_pred EeCCCCCCEEEEEeCCCCc----eEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEE
Confidence 654 335788888876322 2233234556788999998777666667788999999975433 3333333344566
Q ss_pred eecCCCEEEEccCCceEEEe
Q 036314 322 DWWRGDSVISGGVDSKLCVS 341 (347)
Q Consensus 322 ~~~~~~~l~s~s~D~~v~vw 341 (347)
+...+..++|-...+.|...
T Consensus 214 av~~~~ly~tD~~~~~I~~~ 233 (628)
T 4a0p_A 214 TQYQDYIYWTDWSRRSIERA 233 (628)
T ss_dssp EEETTEEEEEETTTTEEEEE
T ss_pred EEECCEEEEecCCCCEEEEE
Confidence 65444445554445555443
No 292
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=95.93 E-value=0.72 Score=39.78 Aligned_cols=194 Identities=8% Similarity=0.060 Sum_probs=104.2
Q ss_pred EEEEEeCCCC-EEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccccccccccc--C-CccceEEEEe----
Q 036314 123 HSIAAETSGN-MVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLV--G-HTQCVSSVVW---- 194 (347)
Q Consensus 123 ~~v~~s~~~~-~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-h~~~v~~~~~---- 194 (347)
-+++|++... ++++.-..++|..|+....... .. . +..+. + ....+.++.+
T Consensus 16 E~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~----~~-~----------------~~~~s~~g~~~~~~sGl~~~~~D 74 (334)
T 2p9w_A 16 EDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHF----NV-V----------------IDGASSNGDGEQQMSGLSLLTHD 74 (334)
T ss_dssp SCEEEETTTTEEEEEETTTTEEEEECTTTCCEE----EE-C----------------CTTTCCSSCCSEEEEEEEESSSS
T ss_pred cCccCcCCCCEEEEEeccCCEEEEEcCCCCeEE----EE-e----------------cCCccccCCCcceeeEEEEeccC
Confidence 3578877554 4455558999999987532110 00 0 00000 0 0113467788
Q ss_pred CCCCeEEEEe-------------cCCcEEEEECC---CCceeeeeee-----C---------eeeEEEEeeCCCCcEEEE
Q 036314 195 PQQETIYSAS-------------WDHSVRTWDVE---MGKDLSDIFC-----G---------KALNCIDIGGEGSALIAA 244 (347)
Q Consensus 195 ~~~~~l~s~s-------------~dg~v~vwd~~---~~~~~~~~~~-----~---------~~~~~~~~~~~~~~~la~ 244 (347)
+++..+++.. .++.|..+|+. +++.+..... . .....++..+. ++..++
T Consensus 75 ~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~-GnaYVt 153 (334)
T 2p9w_A 75 NSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRD-GNSYVA 153 (334)
T ss_dssp SCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTT-SCEEEE
T ss_pred CCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCC-CCEEEe
Confidence 4433444332 25779999998 7766543321 1 13567777665 455666
Q ss_pred ecCC-CcEEEEeCCCCCCCCCeEEec----CCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCcc--ceeec--CCC
Q 036314 245 GGSD-PILRIWDPRKPGTSAPVFQFS----SHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWP--LSVID--SHK 315 (347)
Q Consensus 245 ~~~d-~~i~iwd~~~~~~~~~~~~~~----~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~--~~~~~--~h~ 315 (347)
++.. +.|..++.... ......+. ...-..+.+++.|++..+++.-+ ++.+..+|+++... +. .. +..
T Consensus 154 ~s~~~~~I~rV~pdG~--~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~~pv~~~v~-~~~~G~~ 229 (334)
T 2p9w_A 154 FALGMPAIARVSADGK--TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVSKPYAWPEP-VKINGDF 229 (334)
T ss_dssp EEESSCEEEEECTTSC--CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECSSSSCCCEE-CEESSCC
T ss_pred CCCCCCeEEEEeCCCC--EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCCCCcceeec-ccccCCc
Confidence 7767 77777776521 11111111 11123567899999976555555 99999999985432 21 11 211
Q ss_pred ---CeEEEE-ee-cCCCE-EEEccCCceEEEee
Q 036314 316 ---DKVLCA-DW-WRGDS-VISGGVDSKLCVSS 342 (347)
Q Consensus 316 ---~~v~~~-~~-~~~~~-l~s~s~D~~v~vw~ 342 (347)
...-.+ .- .+|+. |++.+..+.+.+.+
T Consensus 230 ~~~~~~dgilp~~~~G~vllV~~~~~~~~~l~S 262 (334)
T 2p9w_A 230 GTLSGTEKIVTVPVGNESVLVGARAPYAISFRS 262 (334)
T ss_dssp CCCTTEEEEEEEEETTEEEEEEEETTEEEEEEC
T ss_pred ccccCcccccccccCCEEEEEEcCCCCEEEEEC
Confidence 112222 11 35665 66666666665543
No 293
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=95.84 E-value=0.99 Score=40.69 Aligned_cols=153 Identities=6% Similarity=0.047 Sum_probs=82.4
Q ss_pred eEEEEEeCC---CCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeC-CC
Q 036314 122 VHSIAAETS---GNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP-QQ 197 (347)
Q Consensus 122 V~~v~~s~~---~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~ 197 (347)
...++++++ +.++++-.. +.|+.++..+.. +..+.........+++. ++
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~-~~I~~id~~~g~--------------------------v~~~~~~~~~P~giavd~dG 193 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQR-DAFRHVDFVNQY--------------------------VDIKTTNIGQCADVNFTLNG 193 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBT-SCEEEEETTTTE--------------------------EEEECCCCSCEEEEEECTTC
T ss_pred CceEEEccccCCCEEEEEeCC-CCEEEEECCCCE--------------------------EEEeecCCCCccEEEECCCC
Confidence 457889884 554444333 888888875431 11111122335677774 55
Q ss_pred CeEEEEecCC-----cEEEEECCCCcee-eeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCC
Q 036314 198 ETIYSASWDH-----SVRTWDVEMGKDL-SDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSH 271 (347)
Q Consensus 198 ~~l~s~s~dg-----~v~vwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h 271 (347)
+ |+.+...+ .+...+...+... ..+........+++++.++.+.++-..++.|+.+|.........+... +.
T Consensus 194 ~-lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~-~~ 271 (433)
T 4hw6_A 194 D-MVVVDDQSSDTNTGIYLFTRASGFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMM-DT 271 (433)
T ss_dssp C-EEEEECCSCTTSEEEEEECGGGTTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEEC-SC
T ss_pred C-EEEEcCCCCcccceEEEEECCCCeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEecc-CC
Confidence 5 55444322 1222332221110 111112233456676656667766667788999987632110111111 12
Q ss_pred CCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcC
Q 036314 272 NSWISACKWHNKSWFHLISASYDGKVMLWDLR 303 (347)
Q Consensus 272 ~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~ 303 (347)
...-..++|+|++.++.++-.....|+.++.+
T Consensus 272 ~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 272 KGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp CSSCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred CCCcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence 22334699999997667777778899998876
No 294
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=95.40 E-value=1.9 Score=40.92 Aligned_cols=229 Identities=9% Similarity=0.005 Sum_probs=130.0
Q ss_pred EEEEEecCCeEEEEcCCCe-EEEEee-ccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeee
Q 036314 37 FILTGCYDNLGRVWKAGGV-CTHILE-GHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKI 114 (347)
Q Consensus 37 ~l~sg~~d~~i~iw~~~~~-~~~~l~-~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~ 114 (347)
+|+-+ ....|+.-++.+. ....+. ..-..+..|+|.+..+ ....+-..++.|+.++++.... + ..
T Consensus 8 ~Ll~s-~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~---~lywtD~~~~~I~r~~~~g~~~-------~--~v 74 (628)
T 4a0p_A 8 FLLFS-RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDN---RIYWTDISLKTISRAFMNGSAL-------E--HV 74 (628)
T ss_dssp EEEEE-ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTT---EEEEEETTTTEEEEEETTSCSC-------E--EE
T ss_pred EEEEE-eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCC---EEEEEECCCCeEEEEECCCCCc-------E--EE
Confidence 44433 4456777776532 222221 2234577899987544 3456667788999998865321 1 11
Q ss_pred eeccccceEEEEEeCCCC-EEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCcccccccccccccccc-CCccceEEE
Q 036314 115 LRGHKASVHSIAAETSGN-MVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLV-GHTQCVSSV 192 (347)
Q Consensus 115 ~~~h~~~V~~v~~s~~~~-~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~ 192 (347)
+..-......+++.+.+. +.++-...+.|.+.++..... ..+. ..-..-..+
T Consensus 75 ~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~--------------------------~~l~~~~l~~P~~i 128 (628)
T 4a0p_A 75 VEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHR--------------------------QVLVWKDLDSPRAL 128 (628)
T ss_dssp ECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTC--------------------------EEEECSSCCCEEEE
T ss_pred EeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcE--------------------------EEEEeCCCCCcccE
Confidence 211123456788887654 555666677888887653210 0000 111223566
Q ss_pred Ee-CCCCeEEEEec--CCcEEEEECCCCceeeeee-eCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEe
Q 036314 193 VW-PQQETIYSASW--DHSVRTWDVEMGKDLSDIF-CGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQF 268 (347)
Q Consensus 193 ~~-~~~~~l~s~s~--dg~v~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~ 268 (347)
++ |....|+-+.+ .+.|...++.... ...+. .......+++++.++.+..+-...+.|..+|+..... ..+
T Consensus 129 avdp~~G~lY~tD~g~~~~I~r~~~dG~~-~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~----~v~ 203 (628)
T 4a0p_A 129 ALDPAEGFMYWTEWGGKPKIDRAAMDGSE-RTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR----EVI 203 (628)
T ss_dssp EEETTTTEEEEEECSSSCEEEEEETTSCS-CEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC----EEE
T ss_pred EEccCCCeEEEeCCCCCCEEEEEeCCCCc-eEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce----EEe
Confidence 66 44556665553 3566666664332 22222 2234577888877777777777888999999864322 223
Q ss_pred cCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceee
Q 036314 269 SSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVI 311 (347)
Q Consensus 269 ~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~ 311 (347)
.........+++.. .++.++-...+.|...|..+++....+
T Consensus 204 ~~~l~~P~glav~~--~~ly~tD~~~~~I~~~dk~tg~~~~~l 244 (628)
T 4a0p_A 204 ADDLPHPFGLTQYQ--DYIYWTDWSRRSIERANKTSGQNRTII 244 (628)
T ss_dssp EECCSCEEEEEEET--TEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred eccCCCceEEEEEC--CEEEEecCCCCEEEEEECCCCCceEEE
Confidence 33334445677654 355666667888999997776554443
No 295
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=95.25 E-value=2.1 Score=40.54 Aligned_cols=182 Identities=10% Similarity=0.053 Sum_probs=99.0
Q ss_pred CCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEE-EEeeCCCcEEEEecCCCCCCCccceeeeccCC
Q 036314 88 KDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMV-CSGSWDCTISLWRTNDSDAAGNQVSIKKRKGN 166 (347)
Q Consensus 88 ~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l-~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~ 166 (347)
....|+.-+++.... ....+...-.....++|++.+..| ++-...+.|..+++......
T Consensus 16 ~~~~I~~i~~~~~~~--------~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~------------ 75 (619)
T 3s94_A 16 NRRDLRLVDATNGKE--------NATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESV------------ 75 (619)
T ss_dssp CSSBEEEECCC-----------------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----C------------
T ss_pred ccccEEEEeCCCCcc--------eEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCce------------
Confidence 345688888764310 001111223446789999866544 45555677888876532100
Q ss_pred CccccccccccccccccCCccceEEEEeC-CCCeE-EEEecCCcEEEEECCCCceeeeee--eCeeeEEEEeeCCCCcEE
Q 036314 167 NQVEEPQLEGEAISTLVGHTQCVSSVVWP-QQETI-YSASWDHSVRTWDVEMGKDLSDIF--CGKALNCIDIGGEGSALI 242 (347)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~l-~s~s~dg~v~vwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l 242 (347)
...+...-.....+++. .++.| .+-...+.|.+.++.... ...+. .-.....+++.|.++.++
T Consensus 76 ------------~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~-~~~l~~~~l~~P~~Iavdp~~g~ly 142 (619)
T 3s94_A 76 ------------QNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSL-RKVLFWQELDQPRAIALDPSSGFMY 142 (619)
T ss_dssp ------------EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECSSCSCCCCEEEETTTTEEE
T ss_pred ------------EEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCC-EEEEEeCCCCCCceEEEecCCCeEE
Confidence 00011111234566663 34544 444556789999986433 22332 123456788877766666
Q ss_pred EEe-cCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCC
Q 036314 243 AAG-GSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTA 305 (347)
Q Consensus 243 a~~-~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~ 305 (347)
.+- +..+.|...++.... ..........+-..+++++++..+.++=+..+.|...|++..
T Consensus 143 ~tD~g~~~~I~r~~~dG~~---~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~ 203 (619)
T 3s94_A 143 WTDWGEVPKIERAGMDGSS---RFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGT 203 (619)
T ss_dssp EEECSSSCEEEEEETTSCS---CEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCC
T ss_pred EeccCCCCEEEEEECCCCc---eEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCC
Confidence 654 334677777765321 122222344567889999887776666667788999998753
No 296
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=95.25 E-value=1.3 Score=40.59 Aligned_cols=159 Identities=15% Similarity=0.023 Sum_probs=88.7
Q ss_pred eEEEEEeCC-C-CEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-----
Q 036314 122 VHSIAAETS-G-NMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW----- 194 (347)
Q Consensus 122 V~~v~~s~~-~-~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~----- 194 (347)
...|+|+|. . +++++-...+.|++.|..+.... .+ ...-.........++|
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~----~l------------------~~~~~~~~~~p~~ia~~~~~~ 198 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLS----SP------------------LNINTIPTNRIRSIAFNKKIE 198 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEE----EE------------------ECCTTSSCSBEEEEEECCCBT
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEE----EE------------------EccCccccCCCcEEEEeeccc
Confidence 467899983 4 44454444467888877643110 00 0000001123566666
Q ss_pred --C-CCCeEEEEecCC-------cEEEEECCC-Ccee-----eeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCC-
Q 036314 195 --P-QQETIYSASWDH-------SVRTWDVEM-GKDL-----SDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPR- 257 (347)
Q Consensus 195 --~-~~~~l~s~s~dg-------~v~vwd~~~-~~~~-----~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~- 257 (347)
. ++++|+.+...+ .+.+.+... +... ..+........+++++.++.++++-..++.|..+|+.
T Consensus 199 ~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~ 278 (496)
T 3kya_A 199 GYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVD 278 (496)
T ss_dssp TTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHH
T ss_pred ccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEeccc
Confidence 4 556566665554 255665333 2221 1221112334667777677888888888999999986
Q ss_pred ------CCCCCC-----------CeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcC
Q 036314 258 ------KPGTSA-----------PVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLR 303 (347)
Q Consensus 258 ------~~~~~~-----------~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~ 303 (347)
...... .+... +...+-..++|+|++..+.++-+....|+.+|.+
T Consensus 279 ~~~~~~tg~~~tp~~~~~~g~~~~l~~~-~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 279 YFKTIKNGGSWDPIVKNNPNTFKQLFTI-ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp HHHHHHTTCCCCCBGGGCTTTEEEEEEC-SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred ccccccCceeecccccccccccceeEec-CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence 222100 11222 2334567899999997656666778899997664
No 297
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=95.18 E-value=1.2 Score=37.43 Aligned_cols=103 Identities=15% Similarity=0.216 Sum_probs=50.7
Q ss_pred CCCeEEEEecC-----CcEEEEECCCCceeee--eeeCee-eEEEEeeCCCCcEEEEecCC-----CcEEEEeCCCCCCC
Q 036314 196 QQETIYSASWD-----HSVRTWDVEMGKDLSD--IFCGKA-LNCIDIGGEGSALIAAGGSD-----PILRIWDPRKPGTS 262 (347)
Q Consensus 196 ~~~~l~s~s~d-----g~v~vwd~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~la~~~~d-----~~i~iwd~~~~~~~ 262 (347)
++..++.|+.+ ..+.+||+.+.+.... +..... ..++.+ ++.+++.|+.+ +.+.+||+... ..
T Consensus 159 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~---~~~i~v~GG~~~~~~~~~v~~yd~~~~-~W 234 (301)
T 2vpj_A 159 SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL---NDHIYVVGGFDGTAHLSSVEAYNIRTD-SW 234 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE---TTEEEEECCBCSSSBCCCEEEEETTTT-EE
T ss_pred CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE---CCEEEEEeCCCCCcccceEEEEeCCCC-cE
Confidence 44555666554 3588899887654321 111111 122222 34577777654 56889998642 11
Q ss_pred CCeEEecCCCCCeeEEEeCCCCCeEEEEEeCC-----CcEEEEEcCCC
Q 036314 263 APVFQFSSHNSWISACKWHNKSWFHLISASYD-----GKVMLWDLRTA 305 (347)
Q Consensus 263 ~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D-----~~i~lwd~~~~ 305 (347)
..+..+.........+.+ ++ .+++.|+.+ ..+.+||+++.
T Consensus 235 ~~~~~~p~~r~~~~~~~~--~~-~i~v~GG~~~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 235 TTVTSMTTPRCYVGATVL--RG-RLYAIAGYDGNSLLSSIECYDPIID 279 (301)
T ss_dssp EEECCCSSCCBSCEEEEE--TT-EEEEECCBCSSSBEEEEEEEETTTT
T ss_pred EECCCCCCcccceeEEEE--CC-EEEEEcCcCCCcccccEEEEcCCCC
Confidence 111111111112223333 33 456666655 35677888754
No 298
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=94.82 E-value=1.6 Score=36.82 Aligned_cols=103 Identities=15% Similarity=0.198 Sum_probs=49.6
Q ss_pred CCCeEEEEecC-------CcEEEEECCCCceeee--eeeCe-eeEEEEeeCCCCcEEEEecCC-----CcEEEEeCCCCC
Q 036314 196 QQETIYSASWD-------HSVRTWDVEMGKDLSD--IFCGK-ALNCIDIGGEGSALIAAGGSD-----PILRIWDPRKPG 260 (347)
Q Consensus 196 ~~~~l~s~s~d-------g~v~vwd~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~la~~~~d-----~~i~iwd~~~~~ 260 (347)
++..++.|+.+ ..+.+||+.+.+.... +.... ...++.+ ++.+++.|+.+ +.+.+||+...
T Consensus 155 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~- 230 (302)
T 2xn4_A 155 GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL---NNLLYAVGGHDGPLVRKSVEVYDPTTN- 230 (302)
T ss_dssp TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE---TTEEEEECCBSSSSBCCCEEEEETTTT-
T ss_pred CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE---CCEEEEECCCCCCcccceEEEEeCCCC-
Confidence 44455555443 3478899887654321 11111 1122222 34577777654 46889998642
Q ss_pred CCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCC-----cEEEEEcCCC
Q 036314 261 TSAPVFQFSSHNSWISACKWHNKSWFHLISASYDG-----KVMLWDLRTA 305 (347)
Q Consensus 261 ~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~-----~i~lwd~~~~ 305 (347)
....+..+.........+.+ ++ .+++.|+.++ .+.+||+++.
T Consensus 231 ~W~~~~~~~~~r~~~~~~~~--~~-~i~v~GG~~~~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 231 AWRQVADMNMCRRNAGVCAV--NG-LLYVVGGDDGSCNLASVEYYNPTTD 277 (302)
T ss_dssp EEEEECCCSSCCBSCEEEEE--TT-EEEEECCBCSSSBCCCEEEEETTTT
T ss_pred CEeeCCCCCCccccCeEEEE--CC-EEEEECCcCCCcccccEEEEcCCCC
Confidence 11111111111111122333 33 4566666553 4788888764
No 299
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=94.75 E-value=1.6 Score=36.76 Aligned_cols=93 Identities=12% Similarity=0.141 Sum_probs=45.4
Q ss_pred CcEEEEECCCCceeee--eeeCeeeEEEEeeCCCCcEEEEecCC-----CcEEEEeCCCCCCCCCeEEecCCCCCeeEEE
Q 036314 207 HSVRTWDVEMGKDLSD--IFCGKALNCIDIGGEGSALIAAGGSD-----PILRIWDPRKPGTSAPVFQFSSHNSWISACK 279 (347)
Q Consensus 207 g~v~vwd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~la~~~~d-----~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~ 279 (347)
..+.+||+.+.+.... +.....-.++... ++.+++.|+.+ ..+.+||+.... ...+..+........++.
T Consensus 169 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~-W~~~~~~p~~r~~~~~~~ 245 (306)
T 3ii7_A 169 NSCEVYDPATETWTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLNE-WKMVSPMPWKGVTVKCAA 245 (306)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTTE-EEECCCCSCCBSCCEEEE
T ss_pred ceEEEeCCCCCeEEECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCCc-EEECCCCCCCccceeEEE
Confidence 4478899887653321 1111111112221 34577777653 468889986421 111111111122223333
Q ss_pred eCCCCCeEEEEEeCC-----CcEEEEEcCCC
Q 036314 280 WHNKSWFHLISASYD-----GKVMLWDLRTA 305 (347)
Q Consensus 280 ~s~~~~~~l~s~s~D-----~~i~lwd~~~~ 305 (347)
+ ++ .+++.|+.+ ..+.+||+++.
T Consensus 246 ~--~~-~i~v~GG~~~~~~~~~~~~yd~~~~ 273 (306)
T 3ii7_A 246 V--GS-IVYVLAGFQGVGRLGHILEYNTETD 273 (306)
T ss_dssp E--TT-EEEEEECBCSSSBCCEEEEEETTTT
T ss_pred E--CC-EEEEEeCcCCCeeeeeEEEEcCCCC
Confidence 4 33 466777644 46888888764
No 300
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=94.15 E-value=3.1 Score=37.41 Aligned_cols=235 Identities=9% Similarity=0.011 Sum_probs=118.0
Q ss_pred eEEEEEeec-CCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCC---Cc
Q 036314 67 VSSVNIIKS-DGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWD---CT 142 (347)
Q Consensus 67 V~~v~~~~~-~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~D---g~ 142 (347)
...|++.++ .. +. |..+...+.|+.++..+++. ..+.........++++++|+++++.... ..
T Consensus 141 P~gvavd~~s~~--g~-Lyv~D~~~~I~~id~~~g~v----------~~~~~~~~~P~giavd~dG~lyVad~~~~~~~~ 207 (433)
T 4hw6_A 141 IWRMMFDPNSNY--DD-LYWVGQRDAFRHVDFVNQYV----------DIKTTNIGQCADVNFTLNGDMVVVDDQSSDTNT 207 (433)
T ss_dssp CCEEEECTTTTT--CE-EEEECBTSCEEEEETTTTEE----------EEECCCCSCEEEEEECTTCCEEEEECCSCTTSE
T ss_pred CceEEEccccCC--CE-EEEEeCCCCEEEEECCCCEE----------EEeecCCCCccEEEECCCCCEEEEcCCCCcccc
Confidence 456777763 11 12 33333337899998865532 2222334457899999999955554321 11
Q ss_pred -EEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CCCCeEE-EEecCCcEEEEECCCCce
Q 036314 143 -ISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIY-SASWDHSVRTWDVEMGKD 219 (347)
Q Consensus 143 -I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~-s~s~dg~v~vwd~~~~~~ 219 (347)
+...+.... .. ....+..+. ....+++ +.+..|+ +-..++.|..+|..++..
T Consensus 208 gv~~~~~~~~-~~--------------------~~~~~~~~~----~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~ 262 (433)
T 4hw6_A 208 GIYLFTRASG-FT--------------------ERLSLCNAR----GAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTL 262 (433)
T ss_dssp EEEEECGGGT-TC--------------------CEEEEEECS----SBCCCEECTTTCCEEECBTTCSEEEEECTTTCCE
T ss_pred eEEEEECCCC-ee--------------------ccccccccC----CCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeE
Confidence 211211100 00 000000111 1123444 3244444 444567899999876654
Q ss_pred eeeeee-C--eeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCC-CCCeEEecCC---------------CCCeeEEEe
Q 036314 220 LSDIFC-G--KALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGT-SAPVFQFSSH---------------NSWISACKW 280 (347)
Q Consensus 220 ~~~~~~-~--~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~-~~~~~~~~~h---------------~~~v~~v~~ 280 (347)
...+.. . .....+++++++..++++-...+.|+.+|...... ......+.+. -..-..+++
T Consensus 263 ~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav 342 (433)
T 4hw6_A 263 TEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIF 342 (433)
T ss_dssp EEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEE
T ss_pred EEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEE
Confidence 222221 1 12235888777665667777788999988652111 1111222221 112455777
Q ss_pred ---------CCCCCeEEEEEeCCCcEEEEEcCCCccceeecCC------------------CCeEEEEeec-C-CCEEEE
Q 036314 281 ---------HNKSWFHLISASYDGKVMLWDLRTAWPLSVIDSH------------------KDKVLCADWW-R-GDSVIS 331 (347)
Q Consensus 281 ---------s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~h------------------~~~v~~~~~~-~-~~~l~s 331 (347)
.+++ .+.++-.....|+.++.+ +. +.++.+. -....++++. + |..+++
T Consensus 343 ~~n~~y~~dd~~g-~lyvaD~~n~~I~~~~~~-G~-v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVa 419 (433)
T 4hw6_A 343 VKNEAYAGEEDEY-DFYFCDRDSHTVRVLTPE-GR-VTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIG 419 (433)
T ss_dssp EECGGGTTSSCCE-EEEEEETTTTEEEEECTT-SE-EEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEE
T ss_pred EccccccccCCCC-cEEEEECCCCEEEEECCC-CC-EEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEE
Confidence 5554 445555667889999863 42 3333221 1125677776 3 445555
Q ss_pred ccCCceEEEee
Q 036314 332 GGVDSKLCVSS 342 (347)
Q Consensus 332 ~s~D~~v~vw~ 342 (347)
=...+.|+..+
T Consensus 420 D~~n~rIr~i~ 430 (433)
T 4hw6_A 420 DCDNHRVRKIA 430 (433)
T ss_dssp EGGGTEEEEEE
T ss_pred eCCCCEEEEEe
Confidence 55566666543
No 301
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=94.14 E-value=2.8 Score=38.40 Aligned_cols=152 Identities=12% Similarity=0.052 Sum_probs=85.5
Q ss_pred eEEEEeC--CCCeEEEEec-CCcEEEEECCCCceeeeeeeC----eeeEEEEe-------eCCCCcEEEEecCCC-----
Q 036314 189 VSSVVWP--QQETIYSASW-DHSVRTWDVEMGKDLSDIFCG----KALNCIDI-------GGEGSALIAAGGSDP----- 249 (347)
Q Consensus 189 v~~~~~~--~~~~l~s~s~-dg~v~vwd~~~~~~~~~~~~~----~~~~~~~~-------~~~~~~~la~~~~d~----- 249 (347)
...+++. ++..|+.+.. .+.|++.|++.+......... ..+..+++ .+.+..++++...++
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~ 220 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDES 220 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccC
Confidence 3456663 3455555544 367889998876543322221 13677888 776655666554442
Q ss_pred -cEEEEeCCCCCCCC--C-eEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcC-------CCcc-----------
Q 036314 250 -ILRIWDPRKPGTSA--P-VFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLR-------TAWP----------- 307 (347)
Q Consensus 250 -~i~iwd~~~~~~~~--~-~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~-------~~~~----------- 307 (347)
.|.+++....+... . ...+.. ......++.+|++..++++-..++.|..+|++ ++..
T Consensus 221 ~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~ 299 (496)
T 3kya_A 221 PSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNT 299 (496)
T ss_dssp EEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTT
T ss_pred ceEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccc
Confidence 36677643311211 1 122221 12334678899776767777788899999997 4443
Q ss_pred cee-ec-CCCCeEEEEeecC-CCE-EEEccCCceEEEe
Q 036314 308 LSV-ID-SHKDKVLCADWWR-GDS-VISGGVDSKLCVS 341 (347)
Q Consensus 308 ~~~-~~-~h~~~v~~~~~~~-~~~-l~s~s~D~~v~vw 341 (347)
... +. +.....+.++|+| |++ +++-+....|+.+
T Consensus 300 ~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~ki 337 (496)
T 3kya_A 300 FKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRS 337 (496)
T ss_dssp EEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred cceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEE
Confidence 112 11 2223457889975 663 5665667777763
No 302
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=93.80 E-value=2.4 Score=35.03 Aligned_cols=195 Identities=9% Similarity=0.051 Sum_probs=107.4
Q ss_pred eeccccceEEEEEeCCCCEEE-EeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccc--cCCccceEE
Q 036314 115 LRGHKASVHSIAAETSGNMVC-SGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTL--VGHTQCVSS 191 (347)
Q Consensus 115 ~~~h~~~V~~v~~s~~~~~l~-sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~h~~~v~~ 191 (347)
+.+=...+..++++|++..|+ ....++.|...|.. +.. ++.+ .+. .....
T Consensus 22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v-------------------------~~~i~l~g~-~D~EG 74 (255)
T 3qqz_A 22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDL-------------------------IRTIPLDFV-KDLET 74 (255)
T ss_dssp CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCE-------------------------EEEEECSSC-SSEEE
T ss_pred CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCE-------------------------EEEEecCCC-CChHH
Confidence 445456799999999876554 46777888877765 211 1111 111 22345
Q ss_pred EEeC-CCCeEEEEecCCcEEEEECCCCcee---eeee-------eCeeeEEEEeeCCCCcEEEEecCCC-cEEEEeCCCC
Q 036314 192 VVWP-QQETIYSASWDHSVRTWDVEMGKDL---SDIF-------CGKALNCIDIGGEGSALIAAGGSDP-ILRIWDPRKP 259 (347)
Q Consensus 192 ~~~~-~~~~l~s~s~dg~v~vwd~~~~~~~---~~~~-------~~~~~~~~~~~~~~~~~la~~~~d~-~i~iwd~~~~ 259 (347)
+++. ++.++++.-.++.+.++++.....+ .... .......+++.+.+..++++.-.+. .|.-|+-...
T Consensus 75 Ia~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~ 154 (255)
T 3qqz_A 75 IEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLS 154 (255)
T ss_dssp EEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTC
T ss_pred eEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEccccc
Confidence 5553 4444444435567777776543321 1111 1224578899887666666554443 4555541111
Q ss_pred CCCCCeEEe-------cCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceee--c-CCC------CeEEEEee
Q 036314 260 GTSAPVFQF-------SSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVI--D-SHK------DKVLCADW 323 (347)
Q Consensus 260 ~~~~~~~~~-------~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~--~-~h~------~~v~~~~~ 323 (347)
.. .+..+ ..+.....+++++|....+++....+..+..+|.+ ++.+..+ . +.. ..-=+++|
T Consensus 155 ~~--~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~ 231 (255)
T 3qqz_A 155 SN--ELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAM 231 (255)
T ss_dssp SS--CCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEE
T ss_pred CC--ceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEE
Confidence 11 11111 11233468899999988888888888899999976 5554443 2 211 13457788
Q ss_pred c-CCCEEEEccCCceEEE
Q 036314 324 W-RGDSVISGGVDSKLCV 340 (347)
Q Consensus 324 ~-~~~~l~s~s~D~~v~v 340 (347)
- +|+.+++ |.-+.+.+
T Consensus 232 d~~G~lyIv-sE~n~~y~ 248 (255)
T 3qqz_A 232 DASGNIYIV-SEPNRFYR 248 (255)
T ss_dssp CTTCCEEEE-ETTTEEEE
T ss_pred CCCCCEEEE-cCCceEEE
Confidence 5 4665555 44444433
No 303
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=93.60 E-value=3.4 Score=35.98 Aligned_cols=109 Identities=10% Similarity=-0.031 Sum_probs=56.8
Q ss_pred ceeeccCCCCCEEEEEecCCeEEEEcCCCe-EEEEe---eccCCceEEEEEeecCCCceEEEEEccC---C----CcEEE
Q 036314 26 WVSAVDGSNPGFILTGCYDNLGRVWKAGGV-CTHIL---EGHCGAVSSVNIIKSDGLKYVTVATASK---D----QTLRL 94 (347)
Q Consensus 26 ~v~~~~~~~~~~l~sg~~d~~i~iw~~~~~-~~~~l---~~h~~~V~~v~~~~~~~~~~~~l~s~s~---D----g~v~~ 94 (347)
..+.+++.+++.|..+..++.|++++..+. .+..+ ..-......|+++|+-..++...++-+. + +.|..
T Consensus 30 ~P~~ia~~pdG~l~V~e~~g~I~~~d~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r 109 (354)
T 3a9g_A 30 VPWSIAPLGGGRYLVTERPGRLVLISPSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIR 109 (354)
T ss_dssp CEEEEEEEETTEEEEEETTTEEEEECSSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEE
T ss_pred CCeEEEEcCCCeEEEEeCCCEEEEEeCCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEE
Confidence 345666664444555567799999986665 11111 1123457889998852212233333332 3 56777
Q ss_pred EeccccccccCcccccee-eeee---ccccceEEEEEeCCCCEEEEee
Q 036314 95 WKFDAEELVNHPKKIRSF-KILR---GHKASVHSIAAETSGNMVCSGS 138 (347)
Q Consensus 95 wd~~~~~~~~~~~~~~~~-~~~~---~h~~~V~~v~~s~~~~~l~sgs 138 (347)
|+....... ....+.+ ..+. .|. ...++|.|||.+.++-+
T Consensus 110 ~~~~~~~~~--~~~~~~l~~~~~~~~~h~--~~~l~~~pDG~Lyvt~G 153 (354)
T 3a9g_A 110 GRLDGSTFK--LKEVKTLIDGIPGAYIHN--GGRIRFGPDGMLYITTG 153 (354)
T ss_dssp EEECSSSCC--EEEEEEEEEEEECCSSCC--CCCEEECTTSCEEEECC
T ss_pred EEECCCCcC--cCccEEEEEcCCCCCCcC--CceEEECCCCcEEEEEC
Confidence 776543100 0011111 1122 232 35689999998777654
No 304
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=93.58 E-value=3.9 Score=36.60 Aligned_cols=140 Identities=12% Similarity=0.159 Sum_probs=85.0
Q ss_pred CCCCeEEEEecCCcEEEEECCCCceeeeeeeC----e-eeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCC-CC-----
Q 036314 195 PQQETIYSASWDHSVRTWDVEMGKDLSDIFCG----K-ALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGT-SA----- 263 (347)
Q Consensus 195 ~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~-~~----- 263 (347)
.++..++.+ .++.||.-++.....-+.+... . .+..+.+++. +.++|..+ +..|.+-.+..+.. ..
T Consensus 30 ~n~t~i~~a-~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSps-G~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~ 106 (452)
T 3pbp_A 30 QNGTRIVFI-QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTS-GDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQ 106 (452)
T ss_dssp TTTTEEEEE-ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTT-SSEEEEEC-SSEEEEEECCTTCSCCCCHHHH
T ss_pred cCCCEEEEE-ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCC-CCEEEEec-CCeEEEEEecCccccCcccccc
Confidence 566666554 5688998888754433333332 1 3455667554 56776654 56888888752210 10
Q ss_pred ---CeEEecC------CCCCeeEEEeCCCCCe--EEEEEeCCCcEEEEEcCCC--ccceeec---------CCCCeEEEE
Q 036314 264 ---PVFQFSS------HNSWISACKWHNKSWF--HLISASYDGKVMLWDLRTA--WPLSVID---------SHKDKVLCA 321 (347)
Q Consensus 264 ---~~~~~~~------h~~~v~~v~~s~~~~~--~l~s~s~D~~i~lwd~~~~--~~~~~~~---------~h~~~v~~~ 321 (347)
..+.+.- ....|..+.|+|-+.. .|++-..|++||+||+... ++. .+. .+...|.++
T Consensus 107 ~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~ 185 (452)
T 3pbp_A 107 DAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDL 185 (452)
T ss_dssp HTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEE
T ss_pred cccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEE
Confidence 1112221 2467999999997643 6999999999999999863 222 221 233567888
Q ss_pred eecCCC---EEEEccCCceE
Q 036314 322 DWWRGD---SVISGGVDSKL 338 (347)
Q Consensus 322 ~~~~~~---~l~s~s~D~~v 338 (347)
+|..|. ++++.+.+|-|
T Consensus 186 ~Fg~~~lTLYvl~~t~~GDI 205 (452)
T 3pbp_A 186 EFSKDGLTLYCLNTTEGGDI 205 (452)
T ss_dssp EECTTSSCEEEEECTTSCEE
T ss_pred EEcCCCcEEEEEecCCCCCE
Confidence 997544 35555566655
No 305
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=93.35 E-value=3.2 Score=35.01 Aligned_cols=103 Identities=17% Similarity=0.120 Sum_probs=49.4
Q ss_pred CCCeEEEEecC-----CcEEEEECCCCceeee--eeeCe-eeEEEEeeCCCCcEEEEecCC-----CcEEEEeCCCCCCC
Q 036314 196 QQETIYSASWD-----HSVRTWDVEMGKDLSD--IFCGK-ALNCIDIGGEGSALIAAGGSD-----PILRIWDPRKPGTS 262 (347)
Q Consensus 196 ~~~~l~s~s~d-----g~v~vwd~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~la~~~~d-----~~i~iwd~~~~~~~ 262 (347)
++..++.|+.+ ..+.+||+.+.+.... +.... ...++.+ ++.+++.|+.+ ..+.+||+... ..
T Consensus 168 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~-~W 243 (308)
T 1zgk_A 168 NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL---HNCIYAAGGYDGQDQLNSVERYDVETE-TW 243 (308)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE---TTEEEEECCBCSSSBCCCEEEEETTTT-EE
T ss_pred CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE---CCEEEEEeCCCCCCccceEEEEeCCCC-cE
Confidence 44555666554 3588899877653321 11111 1122222 34577777654 56889998642 11
Q ss_pred CCeEEecCCCCCeeEEEeCCCCCeEEEEEeCC-----CcEEEEEcCCC
Q 036314 263 APVFQFSSHNSWISACKWHNKSWFHLISASYD-----GKVMLWDLRTA 305 (347)
Q Consensus 263 ~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D-----~~i~lwd~~~~ 305 (347)
..+..+.........+.+ ++ .+++.|+.+ ..+.+||+++.
T Consensus 244 ~~~~~~p~~r~~~~~~~~--~~-~i~v~GG~~~~~~~~~v~~yd~~~~ 288 (308)
T 1zgk_A 244 TFVAPMKHRRSALGITVH--QG-RIYVLGGYDGHTFLDSVECYDPDTD 288 (308)
T ss_dssp EECCCCSSCCBSCEEEEE--TT-EEEEECCBCSSCBCCEEEEEETTTT
T ss_pred EECCCCCCCccceEEEEE--CC-EEEEEcCcCCCcccceEEEEcCCCC
Confidence 111111111112222333 23 456666643 34677777654
No 306
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=92.90 E-value=4.2 Score=35.07 Aligned_cols=115 Identities=17% Similarity=0.234 Sum_probs=75.5
Q ss_pred CCCCeEEEEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCC-
Q 036314 195 PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNS- 273 (347)
Q Consensus 195 ~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~- 273 (347)
|..+.|+--. .++++++|+++.+.++.....+.+.--.|-.+. .++--+ +..|+-|++... ..|.+.+..|..
T Consensus 76 P~~~ViALra-g~~LQiFnletK~klks~~~~e~VvfWkWis~~--~L~lVT-~taVyHWs~~~~--s~P~kvFdR~~~L 149 (365)
T 2xzh_A 76 PASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLN--TVALVT-DNAVYHWSMEGE--SQPVKMFDRHSSL 149 (365)
T ss_dssp SSSSEEEEEE-TTEEEEEETTTTEEEEEEECSSCEEEEEECSSS--EEEEEE-SSEEEEEESSTT--CCCEEEEECCGGG
T ss_pred CCccEEEEec-CCeEEEechHHhhhhcceecCCccEEEEecCCC--eEEEEc-CCcEEEEcccCC--CCCceeeecchhc
Confidence 4444444433 788999999998888877666655544453433 333333 578999998753 345666666654
Q ss_pred ---CeeEEEeCCCCCeEEEEEe------CCCcEEEEEcCCCccceeecCCCC
Q 036314 274 ---WISACKWHNKSWFHLISAS------YDGKVMLWDLRTAWPLSVIDSHKD 316 (347)
Q Consensus 274 ---~v~~v~~s~~~~~~l~s~s------~D~~i~lwd~~~~~~~~~~~~h~~ 316 (347)
.|-.-..+++..++++.|= -.|.+.||..+++ .-+.++||.+
T Consensus 150 ~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa 200 (365)
T 2xzh_A 150 AGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAA 200 (365)
T ss_dssp TTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEECCSEE
T ss_pred ccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc-ccceeeeeee
Confidence 4666777888887777664 2377899999864 3556677753
No 307
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=92.41 E-value=4.3 Score=33.97 Aligned_cols=103 Identities=15% Similarity=0.215 Sum_probs=50.7
Q ss_pred CCCeEEEEecCC-----cEEEEECCCCceeee--eeeCee-eEEEEeeCCCCcEEEEecCC-----CcEEEEeCCCCCCC
Q 036314 196 QQETIYSASWDH-----SVRTWDVEMGKDLSD--IFCGKA-LNCIDIGGEGSALIAAGGSD-----PILRIWDPRKPGTS 262 (347)
Q Consensus 196 ~~~~l~s~s~dg-----~v~vwd~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~la~~~~d-----~~i~iwd~~~~~~~ 262 (347)
++..++.|+.++ .+.+||+.+.+.... +..... ..+..+ ++.+++.|+.+ ..+..||+... ..
T Consensus 112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~d~~~~-~W 187 (301)
T 2vpj_A 112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA---SGVIYCLGGYDGLNILNSVEKYDPHTG-HW 187 (301)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE---TTEEEEECCBCSSCBCCCEEEEETTTT-EE
T ss_pred CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE---CCEEEEECCCCCCcccceEEEEeCCCC-cE
Confidence 445555555443 578899877654321 111111 112222 34577777654 56888987642 11
Q ss_pred CCeEEecCCCCCeeEEEeCCCCCeEEEEEeCC-----CcEEEEEcCCC
Q 036314 263 APVFQFSSHNSWISACKWHNKSWFHLISASYD-----GKVMLWDLRTA 305 (347)
Q Consensus 263 ~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D-----~~i~lwd~~~~ 305 (347)
..+..+.........+.+ ++ .+++.|+.+ ..+.+||+++.
T Consensus 188 ~~~~~~p~~r~~~~~~~~--~~-~i~v~GG~~~~~~~~~v~~yd~~~~ 232 (301)
T 2vpj_A 188 TNVTPMATKRSGAGVALL--ND-HIYVVGGFDGTAHLSSVEAYNIRTD 232 (301)
T ss_dssp EEECCCSSCCBSCEEEEE--TT-EEEEECCBCSSSBCCCEEEEETTTT
T ss_pred EeCCCCCcccccceEEEE--CC-EEEEEeCCCCCcccceEEEEeCCCC
Confidence 111111111112223333 23 456667654 46889999865
No 308
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=92.23 E-value=4.3 Score=33.55 Aligned_cols=212 Identities=11% Similarity=0.071 Sum_probs=121.5
Q ss_pred EEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEe
Q 036314 58 HILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSG 137 (347)
Q Consensus 58 ~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sg 137 (347)
+.+.+-.+.+..+++.|+++ ...+....++.|...|.+ ++.+. .+ .+.+. ...-.+++.+++.++++.
T Consensus 20 ~~l~g~~~~lSGla~~~~~~---~L~aV~d~~~~I~~ld~~-g~v~~------~i-~l~g~-~D~EGIa~~~~g~~~vs~ 87 (255)
T 3qqz_A 20 KEIAGITNNISSLTWSAQSN---TLFSTINKPAAIVEMTTN-GDLIR------TI-PLDFV-KDLETIEYIGDNQFVISD 87 (255)
T ss_dssp EECTTCCSCEEEEEEETTTT---EEEEEEETTEEEEEEETT-CCEEE------EE-ECSSC-SSEEEEEECSTTEEEEEE
T ss_pred eECCCcccCcceeEEeCCCC---EEEEEECCCCeEEEEeCC-CCEEE------EE-ecCCC-CChHHeEEeCCCEEEEEE
Confidence 35666667899999998543 344446667778877876 43211 11 12332 335678888888877776
Q ss_pred eCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCC
Q 036314 138 SWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEM 216 (347)
Q Consensus 138 s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~ 216 (347)
-.++.+.++++...... ........ .+.. ...+....+++| +.++.|+.+.......+|.+..
T Consensus 88 E~~~~l~~~~v~~~~~i---~~~~~~~~------------~~~~-~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g 151 (255)
T 3qqz_A 88 ERDYAIYVISLTPNSEV---KILKKIKI------------PLQE-SPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNG 151 (255)
T ss_dssp TTTTEEEEEEECTTCCE---EEEEEEEC------------CCSS-CCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEES
T ss_pred CCCCcEEEEEcCCCCee---eeeeeecc------------cccc-ccccCCcceEEEeCCCCEEEEEECcCCceEEEEcc
Confidence 67788999887653210 00000000 0000 112344678888 5666777777766666666541
Q ss_pred ---Cceeeeee--------eCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCC-------CCCeeEE
Q 036314 217 ---GKDLSDIF--------CGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSH-------NSWISAC 278 (347)
Q Consensus 217 ---~~~~~~~~--------~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h-------~~~v~~v 278 (347)
...+..+. .-..+..++++|..+++++....+..+..+|... .......+... ...-..|
T Consensus 152 ~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g--~~~~~~~L~~g~~~l~~~~~qpEGi 229 (255)
T 3qqz_A 152 LLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVG--EVIGEMSLTKGSRGLSHNIKQAEGV 229 (255)
T ss_dssp TTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTC--CEEEEEECSTTGGGCSSCCCSEEEE
T ss_pred cccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCC--CEEEEEEcCCccCCcccccCCCCee
Confidence 11111111 1124577888888888888888899999999753 22223333321 1134678
Q ss_pred EeCCCCCeEEEEEeCCCcEEEEE
Q 036314 279 KWHNKSWFHLISASYDGKVMLWD 301 (347)
Q Consensus 279 ~~s~~~~~~l~s~s~D~~i~lwd 301 (347)
+|.++|. +.+ .|+-..+.++.
T Consensus 230 a~d~~G~-lyI-vsE~n~~y~f~ 250 (255)
T 3qqz_A 230 AMDASGN-IYI-VSEPNRFYRFT 250 (255)
T ss_dssp EECTTCC-EEE-EETTTEEEEEE
T ss_pred EECCCCC-EEE-EcCCceEEEEE
Confidence 9999985 333 36655554443
No 309
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=91.59 E-value=6.1 Score=34.00 Aligned_cols=152 Identities=14% Similarity=0.144 Sum_probs=84.2
Q ss_pred CCEEEEEecCCeEEEEcCC-CeEEEE-eec----cCC--ceEEEEE---eecCCCceEEEEEcc-------------CCC
Q 036314 35 PGFILTGCYDNLGRVWKAG-GVCTHI-LEG----HCG--AVSSVNI---IKSDGLKYVTVATAS-------------KDQ 90 (347)
Q Consensus 35 ~~~l~sg~~d~~i~iw~~~-~~~~~~-l~~----h~~--~V~~v~~---~~~~~~~~~~l~s~s-------------~Dg 90 (347)
+.++++.-+.++|..|++. +..... +.+ ... .+..|.+ .+. +..+++.. .+.
T Consensus 25 g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~----grL~vv~~~~~af~~~g~~~~g~~ 100 (334)
T 2p9w_A 25 QVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNS----KRLFAVMKNAKSFNFADQSSHGAS 100 (334)
T ss_dssp TEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSC----CEEEEEEEETTTTCTTSCCSSSCC
T ss_pred CEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCC----CcEEEEEcccccccccccccCCCC
Confidence 3345555589999999986 433222 332 111 3467777 353 23444322 267
Q ss_pred cEEEEecc---ccccccCccccceeeeeeccc-----------cceEEEEEeCCCCEEEEeeCC-CcEEEEecCCCCCCC
Q 036314 91 TLRLWKFD---AEELVNHPKKIRSFKILRGHK-----------ASVHSIAAETSGNMVCSGSWD-CTISLWRTNDSDAAG 155 (347)
Q Consensus 91 ~v~~wd~~---~~~~~~~~~~~~~~~~~~~h~-----------~~V~~v~~s~~~~~l~sgs~D-g~I~iwd~~~~~~~~ 155 (347)
.|..+|+. +++.+. ...|.+.. .....++..++|+.-++++.- +.|...+....
T Consensus 101 ~v~~~Dl~~~~tg~~~~-------~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~---- 169 (334)
T 2p9w_A 101 SFHSFNLPLSENSKPVW-------SVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK---- 169 (334)
T ss_dssp EEEEEESSCCTTCCCSE-------EEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC----
T ss_pred EEEEEcCCcCCCCCEEE-------EecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC----
Confidence 79999988 554321 11111111 247889999999999988887 77665553321
Q ss_pred ccceeeeccCCCccccccccccccccccCCccceEEEEe-CCCCeEEEEecCCcEEEEECCCC
Q 036314 156 NQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVW-PQQETIYSASWDHSVRTWDVEMG 217 (347)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~ 217 (347)
.......... ........+.+++ |++..|+....+|.|..+|++..
T Consensus 170 -~~~~~~~~~~---------------~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 170 -TVSTFAWESG---------------NGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp -CEEEEEECCC---------------CSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred -EEeeeeecCC---------------CcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 0110000000 0001112345665 67888777766999999998854
No 310
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=91.50 E-value=6.5 Score=34.12 Aligned_cols=51 Identities=6% Similarity=0.049 Sum_probs=28.9
Q ss_pred CcEEEEecCCCcEEEEeCCCCCCCCCeEE-ecCCCCCeeEEEeCCCCCeEEEE
Q 036314 239 SALIAAGGSDPILRIWDPRKPGTSAPVFQ-FSSHNSWISACKWHNKSWFHLIS 290 (347)
Q Consensus 239 ~~~la~~~~d~~i~iwd~~~~~~~~~~~~-~~~h~~~v~~v~~s~~~~~~l~s 290 (347)
+.++++....+.|...++... ....... +..-...+..+++.|+|..++++
T Consensus 289 g~l~v~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~t 340 (353)
T 2g8s_A 289 QKLFIGALKDKDVIVMSVNGD-KVTEDGRILTDRGQRIRDVRTGPDGYLYVLT 340 (353)
T ss_dssp TEEEEEETTTTEEEEEEEETT-EEEEEEEESGGGCCCEEEEEECTTSCEEEEE
T ss_pred CcEEEEEccCCEEEEEEeCCC-eEeeeEEcccCCCCceeEEEECCCCcEEEEE
Confidence 456666666777877776531 1111112 22223468889999998643333
No 311
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=91.47 E-value=7.6 Score=34.91 Aligned_cols=115 Identities=17% Similarity=0.220 Sum_probs=74.7
Q ss_pred CCCCeEEEEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCC-
Q 036314 195 PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNS- 273 (347)
Q Consensus 195 ~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~- 273 (347)
|..+.|+-- ...++.++|+++...++.....+.+.--.|-.+. .++--+ +..|+-|++... ..|.+.+..|.+
T Consensus 75 P~~~iiALr-ag~~lQiFnle~K~klks~~~~e~VvfWkWis~~--~l~lVT-~taVyHWsi~~~--s~P~kvFdR~~~L 148 (494)
T 1bpo_A 75 PASKVIALK-AGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLN--TVALVT-DNAVYHWSMEGE--SQPVKMFDRHSSL 148 (494)
T ss_dssp SSSSCEEEE-ETTEEEEEETTTTEEEEEEECSSCCCEEEEEETT--EEEEEC-SSEEEEEESSSS--CCCEEEEECCGGG
T ss_pred CCCcEEEEe-cCCeEEEEchHHhhhhcceecCCCceEEEecCCC--eEEEEc-CCeeEEecccCC--CCchhheecchhc
Confidence 444444443 3789999999998888777655554333333332 444333 578999998753 345666666654
Q ss_pred ---CeeEEEeCCCCCeEEEEEe------CCCcEEEEEcCCCccceeecCCCC
Q 036314 274 ---WISACKWHNKSWFHLISAS------YDGKVMLWDLRTAWPLSVIDSHKD 316 (347)
Q Consensus 274 ---~v~~v~~s~~~~~~l~s~s------~D~~i~lwd~~~~~~~~~~~~h~~ 316 (347)
.|-.-..+++..+++++|= -.|.+.||..+.+ .-+.++||.+
T Consensus 149 ~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa 199 (494)
T 1bpo_A 149 AGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAA 199 (494)
T ss_dssp TTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEECCSEE
T ss_pred ccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-ccchheeeee
Confidence 4666777888888777664 2477999999864 3455677753
No 312
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=91.10 E-value=7.2 Score=33.95 Aligned_cols=74 Identities=12% Similarity=0.164 Sum_probs=45.2
Q ss_pred eeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCC-CCCeEEEEEeCC-CcEEEEEcC
Q 036314 228 ALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHN-KSWFHLISASYD-GKVMLWDLR 303 (347)
Q Consensus 228 ~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~-~~~~~l~s~s~D-~~i~lwd~~ 303 (347)
..+.++++|++..+.++-+..+.|..||+...+.......+ ........++..+ +|. +.+++..+ +.|..|+.+
T Consensus 222 ~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~-lwva~~~~g~~v~~~~P~ 297 (355)
T 3sre_A 222 FANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGD-LWVGCHPNGMRIFFYDAE 297 (355)
T ss_dssp SEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCC-EEEEEESCHHHHHSCCTT
T ss_pred ccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCc-EEEEecCCceEEEEECCC
Confidence 45788998877777777777899999998643322222233 2234566788888 474 34444444 345555554
No 313
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=90.67 E-value=16 Score=37.31 Aligned_cols=72 Identities=17% Similarity=0.152 Sum_probs=46.3
Q ss_pred CCceeeccCCC-------CCEEEEEec-CCeEEEEcCCCe-E--EEEeeccCCceEEEEEeecCCCceEEEEEccCCCcE
Q 036314 24 DDWVSAVDGSN-------PGFILTGCY-DNLGRVWKAGGV-C--THILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTL 92 (347)
Q Consensus 24 ~~~v~~~~~~~-------~~~l~sg~~-d~~i~iw~~~~~-~--~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v 92 (347)
...|+|+++.+ ..++|.|.+ |++++|+.+... . ...+.+ +....++.+.... ...+|..|-.||.+
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~-~~~p~si~l~~~~--~~~~L~igl~dG~l 629 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGG-EIIPRSILMTTFE--SSHYLLCALGDGAL 629 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCS-SCCEEEEEEEEET--TEEEEEEEETTSEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCC-CCCCcEEEEEEeC--CCcEEEEEeCCCeE
Confidence 45688888652 358999998 999999987642 2 222322 1234455544322 22468889999998
Q ss_pred EEEecc
Q 036314 93 RLWKFD 98 (347)
Q Consensus 93 ~~wd~~ 98 (347)
..+.++
T Consensus 630 ~~~~~d 635 (1158)
T 3ei3_A 630 FYFGLN 635 (1158)
T ss_dssp EEEEEC
T ss_pred EEEEEc
Confidence 777665
No 314
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=90.64 E-value=7.6 Score=33.39 Aligned_cols=20 Identities=5% Similarity=-0.235 Sum_probs=13.6
Q ss_pred CCCEEEEEecC-CeEEEEcCC
Q 036314 34 NPGFILTGCYD-NLGRVWKAG 53 (347)
Q Consensus 34 ~~~~l~sg~~d-~~i~iw~~~ 53 (347)
++.+++.||.+ ..+.++|..
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~ 39 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQ 39 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETT
T ss_pred CCEEEEEeCcCCCeEEEEccc
Confidence 55677777765 467777864
No 315
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=90.58 E-value=6.8 Score=32.75 Aligned_cols=104 Identities=14% Similarity=0.178 Sum_probs=50.0
Q ss_pred CCCeEEEEecCC-----cEEEEECCCCceeee--eeeCeeeEEEEeeCCCCcEEEEecCC-------CcEEEEeCCCCCC
Q 036314 196 QQETIYSASWDH-----SVRTWDVEMGKDLSD--IFCGKALNCIDIGGEGSALIAAGGSD-------PILRIWDPRKPGT 261 (347)
Q Consensus 196 ~~~~l~s~s~dg-----~v~vwd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~la~~~~d-------~~i~iwd~~~~~~ 261 (347)
++..++.|+.++ .+.+||+.+.+.... +.......+... .++.+++.|+.+ ..+..||+... .
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~-~ 184 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGV--VGGLLYAVGGYDVASRQCLSTVECYNATTN-E 184 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCEETTTTEECCCEEEEETTTT-E
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEE--ECCEEEEEeCCCCCCCccccEEEEEeCCCC-c
Confidence 445556666553 477889877654321 111111111222 134566776642 45888998642 1
Q ss_pred CCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCC-----CcEEEEEcCCC
Q 036314 262 SAPVFQFSSHNSWISACKWHNKSWFHLISASYD-----GKVMLWDLRTA 305 (347)
Q Consensus 262 ~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D-----~~i~lwd~~~~ 305 (347)
...+..+.........+.+ ++ .+++.|+.+ ..+.+||+++.
T Consensus 185 W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~yd~~~~ 230 (302)
T 2xn4_A 185 WTYIAEMSTRRSGAGVGVL--NN-LLYAVGGHDGPLVRKSVEVYDPTTN 230 (302)
T ss_dssp EEEECCCSSCCBSCEEEEE--TT-EEEEECCBSSSSBCCCEEEEETTTT
T ss_pred EEECCCCccccccccEEEE--CC-EEEEECCCCCCcccceEEEEeCCCC
Confidence 1111111111112223333 33 456666654 36889998764
No 316
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=90.41 E-value=7.1 Score=32.70 Aligned_cols=60 Identities=10% Similarity=0.206 Sum_probs=31.4
Q ss_pred CCCeEEEEecC-----CcEEEEECCCCceeee--eeeCe-eeEEEEeeCCCCcEEEEecCC-----CcEEEEeCCC
Q 036314 196 QQETIYSASWD-----HSVRTWDVEMGKDLSD--IFCGK-ALNCIDIGGEGSALIAAGGSD-----PILRIWDPRK 258 (347)
Q Consensus 196 ~~~~l~s~s~d-----g~v~vwd~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~la~~~~d-----~~i~iwd~~~ 258 (347)
++..++.|+.+ ..+.+||+.+.+.... +.... ...+..+ ++.+++.|+.+ +.+.+||+..
T Consensus 200 ~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~i~v~GG~~~~~~~~~~~~yd~~~ 272 (306)
T 3ii7_A 200 KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV---GSIVYVLAGFQGVGRLGHILEYNTET 272 (306)
T ss_dssp TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE---TTEEEEEECBCSSSBCCEEEEEETTT
T ss_pred CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE---CCEEEEEeCcCCCeeeeeEEEEcCCC
Confidence 44555555543 3578899887653221 11111 1122222 34567777643 5677788754
No 317
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=87.97 E-value=11 Score=31.61 Aligned_cols=24 Identities=25% Similarity=0.314 Sum_probs=15.8
Q ss_pred CCCeEEEEecC-----CcEEEEECCCCce
Q 036314 196 QQETIYSASWD-----HSVRTWDVEMGKD 219 (347)
Q Consensus 196 ~~~~l~s~s~d-----g~v~vwd~~~~~~ 219 (347)
++..++.|+.+ ..+.+||+.+.+.
T Consensus 215 ~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 243 (308)
T 1zgk_A 215 HNCIYAAGGYDGQDQLNSVERYDVETETW 243 (308)
T ss_dssp TTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred CCEEEEEeCCCCCCccceEEEEeCCCCcE
Confidence 44555666654 4588999887654
No 318
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=87.00 E-value=2.7 Score=37.58 Aligned_cols=119 Identities=11% Similarity=-0.032 Sum_probs=69.3
Q ss_pred ceeeccCC-CCCEEEEEecCCeEEEEcCC-C------------eEEEEee-c-----cCCceEEEEEeecCCCceEEEEE
Q 036314 26 WVSAVDGS-NPGFILTGCYDNLGRVWKAG-G------------VCTHILE-G-----HCGAVSSVNIIKSDGLKYVTVAT 85 (347)
Q Consensus 26 ~v~~~~~~-~~~~l~sg~~d~~i~iw~~~-~------------~~~~~l~-~-----h~~~V~~v~~~~~~~~~~~~l~s 85 (347)
.|..+-.+ +|.+||-.| +.+|.|=.++ + ...+.+. + ...+|..+.|+|-+.. +..|++
T Consensus 67 ~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~-ds~LVV 144 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYR-DSCIVV 144 (452)
T ss_dssp TTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGG-GCEEEE
T ss_pred ceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCC-CCeEEE
Confidence 35556666 456777665 4566775542 1 1122322 1 2467999999996543 346778
Q ss_pred ccCCCcEEEEeccccccccC-ccccceeeeeeccccceEEEEEeCCCCEEEEe--eCCCcEEEE
Q 036314 86 ASKDQTLRLWKFDAEELVNH-PKKIRSFKILRGHKASVHSIAAETSGNMVCSG--SWDCTISLW 146 (347)
Q Consensus 86 ~s~Dg~v~~wd~~~~~~~~~-~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sg--s~Dg~I~iw 146 (347)
=..|++||+||+....-.+. .++......+..+...|.+++|.+++-.|+.. +..|.|.-.
T Consensus 145 LtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 145 LKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp EETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred EecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 88999999999975321000 00000011122344678899999988766654 477777543
No 319
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=85.05 E-value=17 Score=31.04 Aligned_cols=48 Identities=8% Similarity=-0.095 Sum_probs=24.5
Q ss_pred CcEEEEECCCCceeee--eeeCeee-EEEEeeCCCCcEEEEecC------CCcEEEEeC
Q 036314 207 HSVRTWDVEMGKDLSD--IFCGKAL-NCIDIGGEGSALIAAGGS------DPILRIWDP 256 (347)
Q Consensus 207 g~v~vwd~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~la~~~~------d~~i~iwd~ 256 (347)
..+.+||..+.+.... +...... .++.. .++.+++.|+. ...+..||+
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~--~~~~iyv~GG~~~~~~~~~~v~~~d~ 224 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVN--KGDKTWLINGEAKPGLRTDAVFELDF 224 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEE--ETTEEEEECCEEETTEECCCEEEEEC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEE--ECCEEEEEeeecCCCcccCceEEEEe
Confidence 4688899887654322 1111111 12222 13456667664 345777876
No 320
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=83.63 E-value=19 Score=30.25 Aligned_cols=60 Identities=7% Similarity=0.014 Sum_probs=31.9
Q ss_pred CCCeEEEEec-C-----CcEEEEECCCCceeee--eeeCee-eEEEEeeCCCCcEEEEecCCC-----cEEEEeCCC
Q 036314 196 QQETIYSASW-D-----HSVRTWDVEMGKDLSD--IFCGKA-LNCIDIGGEGSALIAAGGSDP-----ILRIWDPRK 258 (347)
Q Consensus 196 ~~~~l~s~s~-d-----g~v~vwd~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~la~~~~d~-----~i~iwd~~~ 258 (347)
++..++.|+. + ..+.+||+.+.+.... +..... ..+..+ ++.+++.|+.++ .+.+||+..
T Consensus 148 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~ 221 (315)
T 4asc_A 148 MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH---DGRIIVAAGVTDTGLTSSAEVYSITD 221 (315)
T ss_dssp TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE---TTEEEEEEEECSSSEEEEEEEEETTT
T ss_pred CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE---CCEEEEEeccCCCCccceEEEEECCC
Confidence 4455556655 2 3588899887643221 111111 122222 345777776544 578888864
No 321
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=83.08 E-value=23 Score=30.81 Aligned_cols=91 Identities=14% Similarity=0.149 Sum_probs=48.3
Q ss_pred cCCeEEEEcCC---CeEE-EEeec-----cCCceEEEEEeecCCCceEEEEEcc--CCCcEEEEeccccccccCccccce
Q 036314 43 YDNLGRVWKAG---GVCT-HILEG-----HCGAVSSVNIIKSDGLKYVTVATAS--KDQTLRLWKFDAEELVNHPKKIRS 111 (347)
Q Consensus 43 ~d~~i~iw~~~---~~~~-~~l~~-----h~~~V~~v~~~~~~~~~~~~l~s~s--~Dg~v~~wd~~~~~~~~~~~~~~~ 111 (347)
.+|.|.++|.. +... -.+.+ .......+.+.++.......+++-. .+.+|.+|+++.+.- ....
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~-----~~~~ 155 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEK-----SLLH 155 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTT-----EEEE
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCC-----EEEE
Confidence 68889999874 2221 12322 2234567777664211223333322 257899998864321 1122
Q ss_pred eeeeecc-ccceEEEEEeCCCCEEEEee
Q 036314 112 FKILRGH-KASVHSIAAETSGNMVCSGS 138 (347)
Q Consensus 112 ~~~~~~h-~~~V~~v~~s~~~~~l~sgs 138 (347)
+..+.+. -...+.+++.++|.+.++..
T Consensus 156 ~~~~~g~~~~~pND~~v~~~G~fyvt~~ 183 (355)
T 3sre_A 156 LKTIRHKLLPSVNDIVAVGPEHFYATND 183 (355)
T ss_dssp EEEECCTTCSSEEEEEEEETTEEEEEES
T ss_pred EeccccCCCCCCceEEEeCCCCEEecCC
Confidence 2333332 23468899999998777653
No 322
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=78.99 E-value=27 Score=29.17 Aligned_cols=104 Identities=12% Similarity=0.043 Sum_probs=49.4
Q ss_pred CCCeEEEEecC--------CcEEEEECCCCceee--eeeeCeeeEEEEeeCCCCcEEEEecC------CCcEEEEeCCCC
Q 036314 196 QQETIYSASWD--------HSVRTWDVEMGKDLS--DIFCGKALNCIDIGGEGSALIAAGGS------DPILRIWDPRKP 259 (347)
Q Consensus 196 ~~~~l~s~s~d--------g~v~vwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~la~~~~------d~~i~iwd~~~~ 259 (347)
++..++.|+.+ ..+.+||..+.+... .+.....-.+... .++.+++.|+. -+.+.+||+...
T Consensus 98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~ 175 (315)
T 4asc_A 98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS--HMDLVYVIGGKGSDRKCLNKMCVYDPKKF 175 (315)
T ss_dssp TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCTTSCBCCCEEEEETTTT
T ss_pred CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE--ECCEEEEEeCCCCCCcccceEEEEeCCCC
Confidence 44445555532 358889988764322 1111111111222 23457777765 246888987642
Q ss_pred CCCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCC-----cEEEEEcCCC
Q 036314 260 GTSAPVFQFSSHNSWISACKWHNKSWFHLISASYDG-----KVMLWDLRTA 305 (347)
Q Consensus 260 ~~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~-----~i~lwd~~~~ 305 (347)
. ...+..+......-.++.+ ++ .+++.|+.++ .+.+||+.+.
T Consensus 176 ~-W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~yd~~~~ 222 (315)
T 4asc_A 176 E-WKELAPMQTARSLFGATVH--DG-RIIVAAGVTDTGLTSSAEVYSITDN 222 (315)
T ss_dssp E-EEECCCCSSCCBSCEEEEE--TT-EEEEEEEECSSSEEEEEEEEETTTT
T ss_pred e-EEECCCCCCchhceEEEEE--CC-EEEEEeccCCCCccceEEEEECCCC
Confidence 1 1111111111111223333 33 4566666543 4788898765
No 323
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=76.90 E-value=35 Score=29.31 Aligned_cols=70 Identities=11% Similarity=0.223 Sum_probs=39.5
Q ss_pred ceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceee---eeeccccceEEEEEeCC---CCEE-EEee
Q 036314 66 AVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFK---ILRGHKASVHSIAAETS---GNMV-CSGS 138 (347)
Q Consensus 66 ~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~---~~~~h~~~V~~v~~s~~---~~~l-~sgs 138 (347)
.-..++|.|++. |+.+..+|.|++++ . ++. ..+. .+..-......++++|+ +..| ++-.
T Consensus 32 ~P~~ia~~pdG~-----l~V~e~~g~I~~i~-~-g~~-------~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~ 97 (352)
T 2ism_A 32 VPWALAFLPDGG-----MLIAERPGRIRLFR-E-GRL-------STYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRT 97 (352)
T ss_dssp CEEEEEECTTSC-----EEEEETTTEEEEEE-T-TEE-------EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEE
T ss_pred CceEEEEcCCCe-----EEEEeCCCeEEEEE-C-CCc-------cEeecceEeecCCCCceeEEECCCCCCCCEEEEEEe
Confidence 457889988542 33445568999988 2 321 1111 11122456788999998 4444 4443
Q ss_pred CC-----CcEEEEecC
Q 036314 139 WD-----CTISLWRTN 149 (347)
Q Consensus 139 ~D-----g~I~iwd~~ 149 (347)
.. ..|..|+..
T Consensus 98 ~~~~~~~~~v~r~~~~ 113 (352)
T 2ism_A 98 VAEGGLRNQVVRLRHL 113 (352)
T ss_dssp ECTTSSEEEEEEEEEC
T ss_pred cCCCCCccEEEEEEeC
Confidence 32 566666654
No 324
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=76.65 E-value=36 Score=29.36 Aligned_cols=112 Identities=11% Similarity=0.018 Sum_probs=57.8
Q ss_pred ceeeccCC-CCCEEEEEecCCeEEEEcCC-CeEE--EEe----eccCCceEEEEEeecCCCceEEEE--EccCCCcEEEE
Q 036314 26 WVSAVDGS-NPGFILTGCYDNLGRVWKAG-GVCT--HIL----EGHCGAVSSVNIIKSDGLKYVTVA--TASKDQTLRLW 95 (347)
Q Consensus 26 ~v~~~~~~-~~~~l~sg~~d~~i~iw~~~-~~~~--~~l----~~h~~~V~~v~~~~~~~~~~~~l~--s~s~Dg~v~~w 95 (347)
.-+.+++. ++.++++--..|+|++++.. +... ..+ ....+....|+++|+...++...+ +...++.|.-|
T Consensus 33 ~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~ 112 (347)
T 3das_A 33 SPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRM 112 (347)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEE
T ss_pred CceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEE
Confidence 34567766 44566655448999998764 4332 112 223455788999884211122222 22345566667
Q ss_pred eccccccc-cCccccce-eeeee---ccccceEEEEEeCCCCEEEEeeC
Q 036314 96 KFDAEELV-NHPKKIRS-FKILR---GHKASVHSIAAETSGNMVCSGSW 139 (347)
Q Consensus 96 d~~~~~~~-~~~~~~~~-~~~~~---~h~~~V~~v~~s~~~~~l~sgs~ 139 (347)
.+..++.. ......+. +..+. .|. -..++|.|||.+.++.+.
T Consensus 113 ~~~~~~~~~~~~~~~~~i~~~~p~~~~H~--g~~l~fgpDG~Lyvt~Gd 159 (347)
T 3das_A 113 LYDEKKPSGEQLGAPDTVFRGIPKGVIHN--GGRIAFGPDKMLYAGTGE 159 (347)
T ss_dssp EBCTTSCTTCCBCCCEEEEEEECCCSSCC--CCCEEECTTSCEEEECBC
T ss_pred EeCCCCcccccCCCcEEEEEcCCCCCCcc--CccccCCCCCCEEEEECC
Confidence 66542110 00011111 11121 233 457899999988887553
No 325
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=75.79 E-value=26 Score=31.60 Aligned_cols=112 Identities=6% Similarity=-0.090 Sum_probs=55.4
Q ss_pred ceeeccCC-CCCEEEEEecCCeEEEEcCC-CeEE--EEeec------cCCceEEEEEeecCCCceEEEEEccC-------
Q 036314 26 WVSAVDGS-NPGFILTGCYDNLGRVWKAG-GVCT--HILEG------HCGAVSSVNIIKSDGLKYVTVATASK------- 88 (347)
Q Consensus 26 ~v~~~~~~-~~~~l~sg~~d~~i~iw~~~-~~~~--~~l~~------h~~~V~~v~~~~~~~~~~~~l~s~s~------- 88 (347)
..+.+++. ++.++++--..+.|++++.. +... ..+.. .++....|+|+|+-..++.+.++-+.
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~ 107 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTD 107 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCc
Confidence 44577776 45556654333478888753 4332 22221 23456789999853222233333332
Q ss_pred -----CCcEEEEeccccccccCcccccee-eeee-ccccceEEEEEeCCCCEEEEeeC
Q 036314 89 -----DQTLRLWKFDAEELVNHPKKIRSF-KILR-GHKASVHSIAAETSGNMVCSGSW 139 (347)
Q Consensus 89 -----Dg~v~~wd~~~~~~~~~~~~~~~~-~~~~-~h~~~V~~v~~s~~~~~l~sgs~ 139 (347)
...|..|+++.+... ....+.+ ..+. ........++|.+||.+.++.+.
T Consensus 108 ~~~~~~~~v~r~~~~~~~~~--~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 108 KELPNQTIIRRYTYNKSTDT--LEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp CCSCEEEEEEEEEEETTTTE--EEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred cccccccEEEEEEECCCCCC--cCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 234555655432100 0011111 1121 11224688999999987776543
No 326
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=74.82 E-value=21 Score=37.37 Aligned_cols=114 Identities=17% Similarity=0.215 Sum_probs=69.0
Q ss_pred CCCCeEEEEecCCcEEEEECCCCceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCC---
Q 036314 195 PQQETIYSASWDHSVRTWDVEMGKDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSH--- 271 (347)
Q Consensus 195 ~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h--- 271 (347)
|..+.++- -..+++.|+|+++...++......++.--.|-.+. .++.-+ +..|.-|++... ..|...+..|
T Consensus 75 P~~~iiAL-rag~~lQiFnl~~k~klks~~~~e~VvfWkWis~~--~l~lVT-~~aVyHW~~~~~--s~P~k~fdR~~~L 148 (1630)
T 1xi4_A 75 PASKVIAL-KAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLN--TVALVT-DNAVYHWSMEGE--SQPVKMFDRHSSL 148 (1630)
T ss_pred CCcceEEE-ecCCeEEEeehHHhhhhcccccCCCceEEEecCCC--eeEEEc-CCeEEEeccCCC--CccHHHHhcchhc
Confidence 33333333 34789999999887777766555554443443333 333333 567999999643 2344444444
Q ss_pred -CCCeeEEEeCCCCCeEEEEEe------CCCcEEEEEcCCCccceeecCCC
Q 036314 272 -NSWISACKWHNKSWFHLISAS------YDGKVMLWDLRTAWPLSVIDSHK 315 (347)
Q Consensus 272 -~~~v~~v~~s~~~~~~l~s~s------~D~~i~lwd~~~~~~~~~~~~h~ 315 (347)
...|..-..+++..+.+++|= -.|.+.+|..+.+. -+.++||.
T Consensus 149 ~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~-sQ~iegha 198 (1630)
T 1xi4_A 149 AGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHA 198 (1630)
T ss_pred ccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc-chhhhHhH
Confidence 234666677888877776664 34889999988653 33344543
No 327
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=71.95 E-value=70 Score=30.50 Aligned_cols=109 Identities=8% Similarity=0.034 Sum_probs=54.3
Q ss_pred CCCeEEEEecCC------cEEEEECCCCceeee--eeeCeeeEEEEeeCCCCcEEEEecCCC--cEEEEeCCCCCCCCCe
Q 036314 196 QQETIYSASWDH------SVRTWDVEMGKDLSD--IFCGKALNCIDIGGEGSALIAAGGSDP--ILRIWDPRKPGTSAPV 265 (347)
Q Consensus 196 ~~~~l~s~s~dg------~v~vwd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~la~~~~d~--~i~iwd~~~~~~~~~~ 265 (347)
++..++.|+.++ .+.+||..+...... +.....-.+.... .++.+++.||.++ .+.+||+.... ...+
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~-~~~~iyv~GG~~~~~~v~~yd~~t~~-W~~~ 528 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSL-PDGNVLILGGVTEGPAMLLYNVTEEI-FKDV 528 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEEC-TTSCEEEECCBCSSCSEEEEETTTTE-EEEC
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEE-cCCEEEEECCCCCCCCEEEEECCCCc-eEEc
Confidence 555566666543 477889887643321 1111111112221 2456777787654 68999986421 1100
Q ss_pred EE---ecCCCCCeeEEEeCCCCCeEEEEEeC--C-----CcEEEEEcCCCc
Q 036314 266 FQ---FSSHNSWISACKWHNKSWFHLISASY--D-----GKVMLWDLRTAW 306 (347)
Q Consensus 266 ~~---~~~h~~~v~~v~~s~~~~~~l~s~s~--D-----~~i~lwd~~~~~ 306 (347)
.. +........++.+..+...+++.|+. + ..+.+||+.+..
T Consensus 529 ~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 529 TPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp CCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred cCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 00 11111122334555442345666665 2 358889988765
No 328
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=70.47 E-value=46 Score=27.76 Aligned_cols=60 Identities=10% Similarity=0.092 Sum_probs=30.8
Q ss_pred CCCeEEEEecC------CcEEEEECCCCceeee--eeeCee-eEEEEeeCCCCcEEEEecCC-----CcEEEEeCCC
Q 036314 196 QQETIYSASWD------HSVRTWDVEMGKDLSD--IFCGKA-LNCIDIGGEGSALIAAGGSD-----PILRIWDPRK 258 (347)
Q Consensus 196 ~~~~l~s~s~d------g~v~vwd~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~la~~~~d-----~~i~iwd~~~ 258 (347)
++..++.|+.+ ..+.+||+.+.+.... +..... ..+..+ ++.+++.|+.+ ..+.+||+..
T Consensus 158 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~ 231 (318)
T 2woz_A 158 NGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH---KGKIVIAGGVTEDGLSASVEAFDLKT 231 (318)
T ss_dssp TTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE---TTEEEEEEEEETTEEEEEEEEEETTT
T ss_pred CCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEE---CCEEEEEcCcCCCCccceEEEEECCC
Confidence 44455555532 3588999887654321 111111 122222 34566777643 3577888764
No 329
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=69.69 E-value=79 Score=30.15 Aligned_cols=109 Identities=9% Similarity=-0.030 Sum_probs=56.0
Q ss_pred CCCCeEEEEecCC--cEEEEECCCCceeeeee-----eCe-eeEEEEeeCCCCcEEEEecCC-------CcEEEEeCCCC
Q 036314 195 PQQETIYSASWDH--SVRTWDVEMGKDLSDIF-----CGK-ALNCIDIGGEGSALIAAGGSD-------PILRIWDPRKP 259 (347)
Q Consensus 195 ~~~~~l~s~s~dg--~v~vwd~~~~~~~~~~~-----~~~-~~~~~~~~~~~~~~la~~~~d-------~~i~iwd~~~~ 259 (347)
.++..++.|+.++ .+.+||..+......-. ... ...++.+....+.+++.||.+ +.+..||+...
T Consensus 499 ~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~ 578 (695)
T 2zwa_A 499 PDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAE 578 (695)
T ss_dssp TTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTT
T ss_pred cCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCC
Confidence 4666777777655 68899998765432211 111 112244444435677777652 46889998753
Q ss_pred CC-----CCCeEEec-CCCCCeeEEEeCCCCCeEEEEEeC--------CCcEEEEEcCCC
Q 036314 260 GT-----SAPVFQFS-SHNSWISACKWHNKSWFHLISASY--------DGKVMLWDLRTA 305 (347)
Q Consensus 260 ~~-----~~~~~~~~-~h~~~v~~v~~s~~~~~~l~s~s~--------D~~i~lwd~~~~ 305 (347)
.- ...+.... .......++.+. ++ .+++.|+. ...+.+||+.+.
T Consensus 579 ~w~~~~~W~~~~~~p~~~R~~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~v~~yd~~t~ 636 (695)
T 2zwa_A 579 NATEPITVIKKLQHPLFQRYGSQIKYIT-PR-KLLIVGGTSPSGLFDRTNSIISLDPLSE 636 (695)
T ss_dssp CSSCCEEEEEEEECGGGCCBSCEEEEEE-TT-EEEEECCBCSSCCCCTTTSEEEEETTTT
T ss_pred ccccceEEEEcCCCCCCCcccceEEEeC-CC-EEEEECCccCCCCCCCCCeEEEEECCCC
Confidence 21 11111111 111122333332 23 45666664 345889998865
No 330
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=67.81 E-value=53 Score=27.39 Aligned_cols=104 Identities=17% Similarity=0.142 Sum_probs=48.8
Q ss_pred CCCeEEEEecC-------CcEEEEECCCCceeee--eeeCeeeEEEEeeCCCCcEEEEecC------CCcEEEEeCCCCC
Q 036314 196 QQETIYSASWD-------HSVRTWDVEMGKDLSD--IFCGKALNCIDIGGEGSALIAAGGS------DPILRIWDPRKPG 260 (347)
Q Consensus 196 ~~~~l~s~s~d-------g~v~vwd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~la~~~~------d~~i~iwd~~~~~ 260 (347)
++..++.|+.+ ..+.+||+.+.+.... +.....-.+... .++.+++.|+. -+.+.+||+....
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 186 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS--HNGMIYCLGGKTDDKKCTNRVFIYNPKKGD 186 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE--ETTEEEEECCEESSSCBCCCEEEEETTTTE
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE--ECCEEEEEcCCCCCCCccceEEEEcCCCCE
Confidence 44555666654 2477889887654321 111111111222 23456677764 2458899986421
Q ss_pred CCCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCC-----CcEEEEEcCCC
Q 036314 261 TSAPVFQFSSHNSWISACKWHNKSWFHLISASYD-----GKVMLWDLRTA 305 (347)
Q Consensus 261 ~~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D-----~~i~lwd~~~~ 305 (347)
...+..+.........+.+ ++ .+++.|+.+ ..+.+||+++.
T Consensus 187 -W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~yd~~~~ 232 (318)
T 2woz_A 187 -WKDLAPMKTPRSMFGVAIH--KG-KIVIAGGVTEDGLSASVEAFDLKTN 232 (318)
T ss_dssp -EEEECCCSSCCBSCEEEEE--TT-EEEEEEEEETTEEEEEEEEEETTTC
T ss_pred -EEECCCCCCCcccceEEEE--CC-EEEEEcCcCCCCccceEEEEECCCC
Confidence 1111111111111223333 33 455556543 34678888764
No 331
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=64.43 E-value=1.3e+02 Score=30.76 Aligned_cols=127 Identities=10% Similarity=-0.080 Sum_probs=66.6
Q ss_pred cEEEEECCCCceeeeeeeC--eeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCCCCCCeEEecCCCCCeeEEEeCCCC-
Q 036314 208 SVRTWDVEMGKDLSDIFCG--KALNCIDIGGEGSALIAAGGSDPILRIWDPRKPGTSAPVFQFSSHNSWISACKWHNKS- 284 (347)
Q Consensus 208 ~v~vwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~s~~~- 284 (347)
.|++.+......+..+... ..+...+. ++..+ +.+. ++.+.++.+... ........ .-...|.|+++.|..
T Consensus 493 ~Irli~~~~~~~~~~w~~p~~~~I~~As~--n~~~v-vva~-g~~l~~fel~~~-~L~~~~~~-~l~~evscl~i~~~~~ 566 (1158)
T 3ei3_A 493 SVRLVSQEPKALVSEWKEPQAKNISVASC--NSSQV-VVAV-GRALYYLQIHPQ-ELRQISHT-EMEHEVACLDITPLGD 566 (1158)
T ss_dssp CEEEEESSSCCEEEEECCTTCCCCCEEEE--CSSEE-EEEE-TTEEEEEEEETT-EEEEEEEE-ECSSCEEEEECCCCSS
T ss_pred EEEEEECCCCeEEEEEECCCCCEEEEEEe--CCCEE-EEEE-CCEEEEEEeeCC-ceeeeccc-CCCCceEEEEeecCCC
Confidence 3666665444444444322 23444443 22333 3333 567878876531 11111111 124469999987642
Q ss_pred ----CeEEEEEeC-CCcEEEEEcCCCcccee--ecCCCCeEEEEeec--CC-CEEEEccCCceEEEe
Q 036314 285 ----WFHLISASY-DGKVMLWDLRTAWPLSV--IDSHKDKVLCADWW--RG-DSVISGGVDSKLCVS 341 (347)
Q Consensus 285 ----~~~l~s~s~-D~~i~lwd~~~~~~~~~--~~~h~~~v~~~~~~--~~-~~l~s~s~D~~v~vw 341 (347)
..++|.|.. |++++|+++.+.+.+.. +.. .....++... .+ .+|..|-.||.+.-+
T Consensus 567 ~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~-~~~p~si~l~~~~~~~~L~igl~dG~l~~~ 632 (1158)
T 3ei3_A 567 SNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGG-EIIPRSILMTTFESSHYLLCALGDGALFYF 632 (1158)
T ss_dssp STTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCS-SCCEEEEEEEEETTEEEEEEEETTSEEEEE
T ss_pred CcccccEEEEEECCCCEEEEEECCCCCeEEEEECCC-CCCCcEEEEEEeCCCcEEEEEeCCCeEEEE
Confidence 246888886 99999999986554432 211 1233333332 22 256666678776543
No 332
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=62.31 E-value=78 Score=29.55 Aligned_cols=95 Identities=16% Similarity=0.125 Sum_probs=59.2
Q ss_pred cEEEEECCC----C-ceeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCC-----CC---CCC--eEEecCCC
Q 036314 208 SVRTWDVEM----G-KDLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKP-----GT---SAP--VFQFSSHN 272 (347)
Q Consensus 208 ~v~vwd~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~-----~~---~~~--~~~~~~h~ 272 (347)
.+.+-|.+. + ..+.-+...+..-.+.++|++..++++|-.+.++.++|.++. +. +.. ..+... .
T Consensus 299 gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~-G 377 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPEL-G 377 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBC-C
T ss_pred CeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccC-C
Confidence 477777765 2 223334444444556778888888888889999999998631 00 000 112221 1
Q ss_pred CCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCC
Q 036314 273 SWISACKWHNKSWFHLISASYDGKVMLWDLRT 304 (347)
Q Consensus 273 ~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~ 304 (347)
-.-.-.+|.++| .-..|--.|..|--|++.+
T Consensus 378 lGPlHt~Fd~~G-~aYTtlfidSqvvkWni~~ 408 (638)
T 3sbq_A 378 LGPLHTTFDGRG-NAYTTLFIDSQVVKWNMEE 408 (638)
T ss_dssp SCEEEEEECSSS-EEEEEETTTTEEEEEEHHH
T ss_pred CcccEEEECCCC-ceEeeeeecceEEEEeccH
Confidence 223457898888 4345555899999999875
No 333
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=62.02 E-value=78 Score=28.52 Aligned_cols=115 Identities=8% Similarity=-0.047 Sum_probs=55.1
Q ss_pred eeeccCCCCC--EEEEEecCCeEEEEcCCCeE----EEEe----e-c----cCCceEEEEEeecCCCceEEEEEccC--C
Q 036314 27 VSAVDGSNPG--FILTGCYDNLGRVWKAGGVC----THIL----E-G----HCGAVSSVNIIKSDGLKYVTVATASK--D 89 (347)
Q Consensus 27 v~~~~~~~~~--~l~sg~~d~~i~iw~~~~~~----~~~l----~-~----h~~~V~~v~~~~~~~~~~~~l~s~s~--D 89 (347)
-+++++.+++ .|+.+-..|.|++++..+.. +..+ . + .++....|+|+|+-..+....++-+. +
T Consensus 16 P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~~ 95 (463)
T 2wg3_C 16 PVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQE 95 (463)
T ss_dssp EEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECCC
T ss_pred ceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCCC
Confidence 3566766433 34445578999999754421 1111 1 1 13557889998742111222232221 1
Q ss_pred ----------CcEEEEecccccc-ccCccccceeeeee--ccccceEEEEEeCCCCEEEEeeCCC
Q 036314 90 ----------QTLRLWKFDAEEL-VNHPKKIRSFKILR--GHKASVHSIAAETSGNMVCSGSWDC 141 (347)
Q Consensus 90 ----------g~v~~wd~~~~~~-~~~~~~~~~~~~~~--~h~~~V~~v~~s~~~~~l~sgs~Dg 141 (347)
..|.-|.+..+.. .......+.+..+. .....-..++|.|||.+.++.+..+
T Consensus 96 ~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 96 RWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM 160 (463)
T ss_dssp SSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred CcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence 1344466543210 00111112222221 1122357899999998777665443
No 334
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=61.67 E-value=17 Score=31.29 Aligned_cols=112 Identities=10% Similarity=0.037 Sum_probs=60.7
Q ss_pred CCEEEEEecCCeEEEEcC-CCeEEEEeecc-CCceEEEEEeecCCCceEEEEEc-cCCCcEEEEeccccccccCccccce
Q 036314 35 PGFILTGCYDNLGRVWKA-GGVCTHILEGH-CGAVSSVNIIKSDGLKYVTVATA-SKDQTLRLWKFDAEELVNHPKKIRS 111 (347)
Q Consensus 35 ~~~l~sg~~d~~i~iw~~-~~~~~~~l~~h-~~~V~~v~~~~~~~~~~~~l~s~-s~Dg~v~~wd~~~~~~~~~~~~~~~ 111 (347)
+++++.++.||.+.-.|. .|+....+... ..++.... .+....++..++.. +.||.|..++..++...-...
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~-~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~---- 84 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQ-EPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLS---- 84 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECC-CSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEE----
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEec-CCccccCCcEEEEEECCCCEEEEEECCCCcEEeeec----
Confidence 568899999999999996 58877777654 12222211 01100011233333 689999888876653110000
Q ss_pred eeeeeccccceEEE---EE-----eCCCCEEEEeeCCCcEEEEecCCCC
Q 036314 112 FKILRGHKASVHSI---AA-----ETSGNMVCSGSWDCTISLWRTNDSD 152 (347)
Q Consensus 112 ~~~~~~h~~~V~~v---~~-----s~~~~~l~sgs~Dg~I~iwd~~~~~ 152 (347)
...+. ...++..- .+ ...+..+++|+.++.+.-.|+.++.
T Consensus 85 ~~~lv-~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~ 132 (339)
T 2be1_A 85 IRQLV-STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGE 132 (339)
T ss_dssp HHHHH-TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCC
T ss_pred cccce-eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCc
Confidence 00000 12222210 00 0135678889999999999988764
No 335
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=60.63 E-value=33 Score=34.26 Aligned_cols=33 Identities=9% Similarity=0.014 Sum_probs=24.4
Q ss_pred eeeccCC-CCCEEEEEecCCeEEEEcC-CCeEEEE
Q 036314 27 VSAVDGS-NPGFILTGCYDNLGRVWKA-GGVCTHI 59 (347)
Q Consensus 27 v~~~~~~-~~~~l~sg~~d~~i~iw~~-~~~~~~~ 59 (347)
+.++... +..+++|-|.|+++|+|+. .+.|+.+
T Consensus 238 ~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t 272 (950)
T 4gq2_M 238 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVET 272 (950)
T ss_dssp EEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEE
T ss_pred EEEEeecCCCcEEEEEECCCEEEEEECCCCCeEee
Confidence 3444433 4569999999999999996 4777665
No 336
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=56.25 E-value=2e+02 Score=30.33 Aligned_cols=92 Identities=11% Similarity=0.174 Sum_probs=51.5
Q ss_pred CCeEEEEcCCCe-EEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeecc----
Q 036314 44 DNLGRVWKAGGV-CTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGH---- 118 (347)
Q Consensus 44 d~~i~iw~~~~~-~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h---- 118 (347)
..+++|+|+..+ .++.+.-+ ..|.--.|..... --|+|.. .|.-|++.+.. .|.+.|.-|
T Consensus 85 g~~lQiFnl~~k~klks~~~~-e~VvfWkWis~~~---l~lVT~~---aVyHW~~~~~s--------~P~k~fdR~~~L~ 149 (1630)
T 1xi4_A 85 GKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISLNT---VALVTDN---AVYHWSMEGES--------QPVKMFDRHSSLA 149 (1630)
T ss_pred CCeEEEeehHHhhhhcccccC-CCceEEEecCCCe---eEEEcCC---eEEEeccCCCC--------ccHHHHhcchhcc
Confidence 578999997532 22222222 3466667765332 2344433 69999996421 122233333
Q ss_pred ccceEEEEEeCCCCEEEE-e------eCCCcEEEEecCC
Q 036314 119 KASVHSIAAETSGNMVCS-G------SWDCTISLWRTND 150 (347)
Q Consensus 119 ~~~V~~v~~s~~~~~l~s-g------s~Dg~I~iwd~~~ 150 (347)
...|..-..+++.++++- | .-.|.+.+|.++.
T Consensus 150 ~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er 188 (1630)
T 1xi4_A 150 GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR 188 (1630)
T ss_pred cCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccc
Confidence 344555566888887763 2 2457788887654
No 337
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=55.47 E-value=69 Score=27.52 Aligned_cols=30 Identities=20% Similarity=0.210 Sum_probs=25.0
Q ss_pred CCCeEEEEecCCcEEEEECCCCceeeeeee
Q 036314 196 QQETIYSASWDHSVRTWDVEMGKDLSDIFC 225 (347)
Q Consensus 196 ~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~ 225 (347)
.++.+++++.++++...|+++|+.+-.+..
T Consensus 110 ~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 110 EDEKVYTGSMRTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp CCEEEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred cCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence 456789999999999999999988766543
No 338
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=52.27 E-value=24 Score=36.07 Aligned_cols=30 Identities=13% Similarity=0.188 Sum_probs=25.4
Q ss_pred eCCCCeEEEEecCCcEEEEECCCCceeeee
Q 036314 194 WPQQETIYSASWDHSVRTWDVEMGKDLSDI 223 (347)
Q Consensus 194 ~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~ 223 (347)
.++...+++.+.|+++|+|++.+++++.+.
T Consensus 246 ~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 246 LSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp ETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred cCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 356678999999999999999999887654
No 339
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=50.92 E-value=23 Score=33.94 Aligned_cols=36 Identities=11% Similarity=0.290 Sum_probs=28.2
Q ss_pred cceEEEEeCCCCeEEEEecCCcEEEEECCCCceeeee
Q 036314 187 QCVSSVVWPQQETIYSASWDHSVRTWDVEMGKDLSDI 223 (347)
Q Consensus 187 ~~v~~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~ 223 (347)
..|.++.+ +...+++.+.|+++|+|++++++++...
T Consensus 222 ~~Is~~~~-~~~fLftL~~Dh~LRiWsL~t~~lv~t~ 257 (729)
T 3f7f_A 222 SVISCKLF-HERYLIVLTQNCHLKIWDLTSFTLIQDY 257 (729)
T ss_dssp CEEEEEEE-TTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred ceEEEecc-CCcEEEEEEcCCeEEEEEcCCCceEEee
Confidence 34565555 4678999999999999999999876554
No 340
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=38.67 E-value=2.2e+02 Score=25.67 Aligned_cols=180 Identities=11% Similarity=0.146 Sum_probs=95.1
Q ss_pred CEEEEEecCCeEEEEcCCC-eEEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeee
Q 036314 36 GFILTGCYDNLGRVWKAGG-VCTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKI 114 (347)
Q Consensus 36 ~~l~sg~~d~~i~iw~~~~-~~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~ 114 (347)
..||-=. ..+++++|+.. ..++.+.-.+ .|.--.|..+.. --|+|.. .|.-|+++... .+.+.
T Consensus 78 ~iiALra-g~~lQiFnle~K~klks~~~~e-~VvfWkWis~~~---l~lVT~t---aVyHWsi~~~s--------~P~kv 141 (494)
T 1bpo_A 78 KVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISLNT---VALVTDN---AVYHWSMEGES--------QPVKM 141 (494)
T ss_dssp SCEEEEE-TTEEEEEETTTTEEEEEEECSS-CCCEEEEEETTE---EEEECSS---EEEEEESSSSC--------CCEEE
T ss_pred cEEEEec-CCeEEEEchHHhhhhcceecCC-CceEEEecCCCe---EEEEcCC---eeEEecccCCC--------Cchhh
Confidence 3444332 57999999864 3444444333 466677776432 2344433 69999986532 23444
Q ss_pred eecc----ccceEEEEEeCCCCEEEEee-------CCCcEEEEecCCCCCCCccceeeeccCCCcccccccccccccccc
Q 036314 115 LRGH----KASVHSIAAETSGNMVCSGS-------WDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLV 183 (347)
Q Consensus 115 ~~~h----~~~V~~v~~s~~~~~l~sgs-------~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (347)
|.-| ...|..-..+++.++++-.| -.|.+.+|..+.. ..+.+.
T Consensus 142 FdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~--------------------------~sQ~ie 195 (494)
T 1bpo_A 142 FDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK--------------------------VSQPIE 195 (494)
T ss_dssp EECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC--------------------------CEEEEC
T ss_pred eecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc--------------------------ccchhe
Confidence 4444 23355556688888776322 3467888876642 233456
Q ss_pred CCccceEEEEeCCC---CeEEE-Eec---CCcEEEEECCCC---c-----eeeeeeeC-----eeeEEEEeeCCCCcEEE
Q 036314 184 GHTQCVSSVVWPQQ---ETIYS-ASW---DHSVRTWDVEMG---K-----DLSDIFCG-----KALNCIDIGGEGSALIA 243 (347)
Q Consensus 184 ~h~~~v~~~~~~~~---~~l~s-~s~---dg~v~vwd~~~~---~-----~~~~~~~~-----~~~~~~~~~~~~~~~la 243 (347)
||-.+...+..+.. ..|++ +.. .+.++|-++... . ....++.. .-.-++.+++.-+ ++.
T Consensus 196 Ghaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kyg-viy 274 (494)
T 1bpo_A 196 GHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHD-VVF 274 (494)
T ss_dssp CSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTT-EEE
T ss_pred eeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCC-EEE
Confidence 66544444433211 12222 222 267888887432 1 11111111 1123444544433 444
Q ss_pred EecCCCcEEEEeCCC
Q 036314 244 AGGSDPILRIWDPRK 258 (347)
Q Consensus 244 ~~~~d~~i~iwd~~~ 258 (347)
.-+.-|.+++||+..
T Consensus 275 viTK~G~i~lyDleT 289 (494)
T 1bpo_A 275 LITKYGYIHLYDLET 289 (494)
T ss_dssp EEETTSEEEEEETTT
T ss_pred EEecCceEEEEeccc
Confidence 456789999999975
No 341
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=37.23 E-value=1.8e+02 Score=24.32 Aligned_cols=114 Identities=11% Similarity=0.007 Sum_probs=61.4
Q ss_pred EEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEEEecCCCCCCCccceee
Q 036314 82 TVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISLWRTNDSDAAGNQVSIK 161 (347)
Q Consensus 82 ~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~ 161 (347)
.|+..+..|.++.-.+..-.... ......-.+.. .+.+..+....+...++..+.+|.+..+...+-...++..
T Consensus 116 ~ll~~T~~G~~kr~~l~~~~~~r--~~G~~~i~L~~-~d~lv~~~~~~~~~~i~l~T~~G~~~r~~~~ev~~~gR~~--- 189 (312)
T 1suu_A 116 YLLLTTASGKIARFESTDFKAVK--SRGVIVIKLND-KDFVTSAEIVFKDEKVICLSKKGSAFIFNSRDVRLTNRGT--- 189 (312)
T ss_dssp EEEEEETTSEEEEEEGGGGCC------CEECBCCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTB---
T ss_pred EEEEEeCCCeEEEEEHHHhhccC--CCcEEEEecCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHccccCCCC---
Confidence 46778899999988765321100 01111112333 4566666555555677788999999888876422111100
Q ss_pred eccCCCccccccccccccccccCCccceEEEE-eCCCCeEEEEecCCcEEEEECC
Q 036314 162 KRKGNNQVEEPQLEGEAISTLVGHTQCVSSVV-WPQQETIYSASWDHSVRTWDVE 215 (347)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~-~~~~~~l~s~s~dg~v~vwd~~ 215 (347)
.|...-.+.. .+.|.++. ..++..++..+..|..+..++.
T Consensus 190 -------------~Gv~~i~L~~-~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~ 230 (312)
T 1suu_A 190 -------------QGVCGMKLKE-GDLFVKVLSVKENPYLLIVSENGYGKRLNMS 230 (312)
T ss_dssp -------------CCEECCCCCT-TCCEEEEEECTTCSEEEEEETTSEEEEEEGG
T ss_pred -------------CCeEeEEeCC-CCEEEEEEEECCCCeEEEEECCCceEEEEHH
Confidence 0111112222 23344443 3455668888888888887764
No 342
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=37.11 E-value=41 Score=32.28 Aligned_cols=35 Identities=23% Similarity=0.284 Sum_probs=26.2
Q ss_pred CeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCccceee
Q 036314 274 WISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSVI 311 (347)
Q Consensus 274 ~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~~ 311 (347)
.|.++.+. + .+|++-+.|.++|+|++++++.+.+.
T Consensus 223 ~Is~~~~~-~--~fLftL~~Dh~LRiWsL~t~~lv~t~ 257 (729)
T 3f7f_A 223 VISCKLFH-E--RYLIVLTQNCHLKIWDLTSFTLIQDY 257 (729)
T ss_dssp EEEEEEET-T--TEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEeccC-C--cEEEEEEcCCeEEEEEcCCCceEEee
Confidence 35554553 3 36999999999999999998766543
No 343
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=36.76 E-value=25 Score=35.94 Aligned_cols=35 Identities=23% Similarity=0.140 Sum_probs=26.5
Q ss_pred eeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCcccee
Q 036314 275 ISACKWHNKSWFHLISASYDGKVMLWDLRTAWPLSV 310 (347)
Q Consensus 275 v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~~~~ 310 (347)
+.+++..++.. +|++-+.|+++|+|++++++++.+
T Consensus 240 ~vs~~~~~~~~-~lftL~~D~~LRiWsl~t~~~v~t 274 (1139)
T 4fhn_B 240 IISMIFLSTYN-VLVMLSLDYKLKVLDLSTNQCVET 274 (1139)
T ss_dssp BSCCEEETTTT-EEEEEBTTCEEEEEETTTTEEEEE
T ss_pred eEEeeccCCcc-EEEEEeCCCEEEEEECCCCCeEEe
Confidence 44455555553 689999999999999999876654
No 344
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=36.20 E-value=3.4e+02 Score=27.02 Aligned_cols=35 Identities=14% Similarity=0.280 Sum_probs=27.5
Q ss_pred eEEEEe-CCCCeEEEEecCCcEEEEECCCCceeeee
Q 036314 189 VSSVVW-PQQETIYSASWDHSVRTWDVEMGKDLSDI 223 (347)
Q Consensus 189 v~~~~~-~~~~~l~s~s~dg~v~vwd~~~~~~~~~~ 223 (347)
+.+++. ++...+++.+.|+++|+|++.+++++.+.
T Consensus 238 ~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 238 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp EEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred EEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 444444 56678899999999999999999877654
No 345
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=35.41 E-value=1.7e+02 Score=23.49 Aligned_cols=101 Identities=13% Similarity=0.081 Sum_probs=52.0
Q ss_pred eEEEEeCCCCeEEEEecCCcEEEEECCCCcee------eeeee-C-eeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCC
Q 036314 189 VSSVVWPQQETIYSASWDHSVRTWDVEMGKDL------SDIFC-G-KALNCIDIGGEGSALIAAGGSDPILRIWDPRKPG 260 (347)
Q Consensus 189 v~~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~------~~~~~-~-~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~ 260 (347)
+..++|.++..|+.+ .+|.+.-.+..++... ..+-. + +...++.+.++ +.+.++ .||.|.-++.-..+
T Consensus 43 ~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~-G~LYav--~dG~iyr~~pP~~~ 118 (236)
T 1tl2_A 43 FKFLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPN-GYLYAV--SKDKLYKASPPQSD 118 (236)
T ss_dssp CSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTT-SCEEEE--ETTEEEEESCCCST
T ss_pred ceeEEECCCccEEEE-eCCeEEEECCCCCCcccccccccEecccccccceEEEECCC-CCEEEe--CCCEEEEeCCCcCC
Confidence 447787545556666 6776555554332110 11110 0 11356777654 455555 56999888753211
Q ss_pred CCCCe----EEe-cCCCCCeeEEEeCCCCCeEEEEEeCCCcE
Q 036314 261 TSAPV----FQF-SSHNSWISACKWHNKSWFHLISASYDGKV 297 (347)
Q Consensus 261 ~~~~~----~~~-~~h~~~v~~v~~s~~~~~~l~s~s~D~~i 297 (347)
. ... ..+ ...=+.+..+.|.|+|. |.... |+.+
T Consensus 119 ~-~~Wl~~a~~vg~~gw~~~~~lff~p~G~--Lyav~-dg~l 156 (236)
T 1tl2_A 119 T-DNWIARATEVGSGGWSGFKFLFFHPNGY--LYAVH-GQQF 156 (236)
T ss_dssp T-CCHHHHSEEEECSSGGGEEEEEECTTSC--EEEEE-TTEE
T ss_pred C-CceeccccEeccCCCCceEEEEECCCce--EEEEe-CCcE
Confidence 1 000 111 11113478899999984 44455 7774
No 346
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=28.72 E-value=2.7e+02 Score=23.58 Aligned_cols=130 Identities=10% Similarity=-0.019 Sum_probs=69.3
Q ss_pred CceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEE
Q 036314 65 GAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTIS 144 (347)
Q Consensus 65 ~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~ 144 (347)
..|.++-..++.. +...++..+.+|.+|.-.+..-... .......-.+.. .+.+..+........++-.+..|.+.
T Consensus 95 e~i~~~~~~~~~~-~e~~~v~~T~~G~iKr~~l~~~~~~--~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~ 170 (327)
T 3uc1_A 95 ERIAQVIQIRGYT-DAPYLVLATRNGLVKKSKLTDFDSN--RSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSI 170 (327)
T ss_dssp CCEEEEEEESSTT-SSSEEEEEETTSEEEEEEGGGGCCC--CSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEE
T ss_pred CEEEEEEEeccCC-CCCEEEEEcCCCEEEEeEHHHhhcc--ccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEE
Confidence 4566654443211 1236888999999999886542110 000011112333 34555555444556677788889988
Q ss_pred EEecC--CCCCCCccceeeeccCCCccccccccccccccccCCccceEEEE-eCCCCeEEEEecCCcEEEEECC
Q 036314 145 LWRTN--DSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVV-WPQQETIYSASWDHSVRTWDVE 215 (347)
Q Consensus 145 iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~-~~~~~~l~s~s~dg~v~vwd~~ 215 (347)
.+.+. .-+..+... .|...-.+.. .+.|.++. .+++..++..+..|.++.-.+.
T Consensus 171 rf~~~~~eip~~gr~a----------------~Gv~~i~L~~-~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~ 227 (327)
T 3uc1_A 171 RFSATDEALRPMGRAT----------------SGVQGMRFNI-DDRLLSLNVVREGTYLLVATSGGYAKRTAIE 227 (327)
T ss_dssp EEECCTTTSCCCCTTS----------------BCEESSCCCT-TCCEEEEEECCTTCEEEEEETTSEEEEEEGG
T ss_pred EEECcccccCcCCcCC----------------CCeeeecCCC-CCEEEEEEEECCCCEEEEEeCCCcEEEEEHH
Confidence 88776 322111100 0111112222 23454444 3556688889999999887653
No 347
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=28.21 E-value=2.7e+02 Score=23.55 Aligned_cols=72 Identities=15% Similarity=0.132 Sum_probs=39.6
Q ss_pred eEEecCCCCCeeEEEeCC-------CCCeEEEEEeCCCcEEEEEcCCCcccee--e-cCCCCeEEEEeecC-CCEEE-Ec
Q 036314 265 VFQFSSHNSWISACKWHN-------KSWFHLISASYDGKVMLWDLRTAWPLSV--I-DSHKDKVLCADWWR-GDSVI-SG 332 (347)
Q Consensus 265 ~~~~~~h~~~v~~v~~s~-------~~~~~l~s~s~D~~i~lwd~~~~~~~~~--~-~~h~~~v~~~~~~~-~~~l~-s~ 332 (347)
...+..|. ....+.|.. ++ .++++.-..+.|...+++.+..... + ..-...+..+++.| |..++ +-
T Consensus 264 ~~~~~~~~-ap~G~~~y~g~~fp~~~g-~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~td 341 (353)
T 2g8s_A 264 VFYWKDSP-AVSGMAFYNSDKFPQWQQ-KLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLTD 341 (353)
T ss_dssp SEEESSCC-CEEEEEEECCSSSGGGTT-EEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEEC
T ss_pred eEEeCCCc-CcceeEEECCccCcccCC-cEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEEe
Confidence 34444443 455667653 23 4566555677888888875533221 2 22234788888864 66544 33
Q ss_pred cCCceE
Q 036314 333 GVDSKL 338 (347)
Q Consensus 333 s~D~~v 338 (347)
..++.|
T Consensus 342 ~~~g~I 347 (353)
T 2g8s_A 342 ESSGEL 347 (353)
T ss_dssp STTEEE
T ss_pred CCCCEE
Confidence 345544
No 348
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=26.53 E-value=3.1e+02 Score=23.64 Aligned_cols=180 Identities=11% Similarity=0.154 Sum_probs=93.4
Q ss_pred CEEEEEecCCeEEEEcCCCe-EEEEeeccCCceEEEEEeecCCCceEEEEEccCCCcEEEEeccccccccCccccceeee
Q 036314 36 GFILTGCYDNLGRVWKAGGV-CTHILEGHCGAVSSVNIIKSDGLKYVTVATASKDQTLRLWKFDAEELVNHPKKIRSFKI 114 (347)
Q Consensus 36 ~~l~sg~~d~~i~iw~~~~~-~~~~l~~h~~~V~~v~~~~~~~~~~~~l~s~s~Dg~v~~wd~~~~~~~~~~~~~~~~~~ 114 (347)
..||-=. ..+++++|++.+ .++.+.-. ..|.--.|..+.. --|+|.. .|.-|+++... .+.+.
T Consensus 79 ~ViALra-g~~LQiFnletK~klks~~~~-e~VvfWkWis~~~---L~lVT~t---aVyHWs~~~~s--------~P~kv 142 (365)
T 2xzh_A 79 KVIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISLNT---VALVTDN---AVYHWSMEGES--------QPVKM 142 (365)
T ss_dssp SEEEEEE-TTEEEEEETTTTEEEEEEECS-SCEEEEEECSSSE---EEEEESS---EEEEEESSTTC--------CCEEE
T ss_pred cEEEEec-CCeEEEechHHhhhhcceecC-CccEEEEecCCCe---EEEEcCC---cEEEEcccCCC--------CCcee
Confidence 4455433 578999998643 34443333 4566667765331 2345543 69999987532 23444
Q ss_pred eecc----ccceEEEEEeCCCCEEEEee-------CCCcEEEEecCCCCCCCccceeeeccCCCcccccccccccccccc
Q 036314 115 LRGH----KASVHSIAAETSGNMVCSGS-------WDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLV 183 (347)
Q Consensus 115 ~~~h----~~~V~~v~~s~~~~~l~sgs-------~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (347)
|.-| ...|..-..+++.++++-.+ -.|.+.+|..+.. ..+.+.
T Consensus 143 FdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~--------------------------~sQ~ie 196 (365)
T 2xzh_A 143 FDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK--------------------------VSQPIE 196 (365)
T ss_dssp EECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT--------------------------EEEEEC
T ss_pred eecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc--------------------------ccceee
Confidence 4444 23355556678888775322 2366777876542 234456
Q ss_pred CCccceEEEEeCC---CCeEEE-Eec---CCcEEEEECCCC---ce-----eeeeeeC-----eeeEEEEeeCCCCcEEE
Q 036314 184 GHTQCVSSVVWPQ---QETIYS-ASW---DHSVRTWDVEMG---KD-----LSDIFCG-----KALNCIDIGGEGSALIA 243 (347)
Q Consensus 184 ~h~~~v~~~~~~~---~~~l~s-~s~---dg~v~vwd~~~~---~~-----~~~~~~~-----~~~~~~~~~~~~~~~la 243 (347)
||-.+-..+..+. ...|++ +.. .+.++|-++... .. ...++.. .-.-++.+++.-+ ++.
T Consensus 197 Ghaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kyg-viy 275 (365)
T 2xzh_A 197 GHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHD-VVF 275 (365)
T ss_dssp CSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTT-EEE
T ss_pred eeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCC-EEE
Confidence 6654433333221 112322 211 257888887432 11 1111111 1122344443333 444
Q ss_pred EecCCCcEEEEeCCC
Q 036314 244 AGGSDPILRIWDPRK 258 (347)
Q Consensus 244 ~~~~d~~i~iwd~~~ 258 (347)
.-+.-|.+++||+..
T Consensus 276 viTK~G~ihlyDleT 290 (365)
T 2xzh_A 276 LITKYGYIHLYDLET 290 (365)
T ss_dssp EEETTSEEEEEETTT
T ss_pred EEeCCcEEEEEEccc
Confidence 455679999999975
No 349
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=26.02 E-value=3.5e+02 Score=24.02 Aligned_cols=30 Identities=7% Similarity=-0.044 Sum_probs=21.2
Q ss_pred cceEEEEEeCCCCEEEEeeCCCcEEEEecC
Q 036314 120 ASVHSIAAETSGNMVCSGSWDCTISLWRTN 149 (347)
Q Consensus 120 ~~V~~v~~s~~~~~l~sgs~Dg~I~iwd~~ 149 (347)
.....++|.|+|+++++-...+.|++++..
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~ 56 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPE 56 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTT
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECC
Confidence 345789999999977765444468777643
No 350
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=25.85 E-value=3.4e+02 Score=25.72 Aligned_cols=65 Identities=11% Similarity=0.136 Sum_probs=38.3
Q ss_pred eEEEEEccCCCcEE-EEeccccccccCcc-ccceeeeeeccccceEEEEEeCCCCEEEEeeCCCcEEE
Q 036314 80 YVTVATASKDQTLR-LWKFDAEELVNHPK-KIRSFKILRGHKASVHSIAAETSGNMVCSGSWDCTISL 145 (347)
Q Consensus 80 ~~~l~s~s~Dg~v~-~wd~~~~~~~~~~~-~~~~~~~~~~h~~~V~~v~~s~~~~~l~sgs~Dg~I~i 145 (347)
...+..|..+|.|+ +.-........... ..+.+..+ ....+|..+.++++...|+.++.++.++|
T Consensus 429 ytVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~-~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 429 YDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVF-REPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEEEETTSEEEEEEEEC------CEEEEEEEEECS-SSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeec-CCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 45677888999875 33222111000000 01111222 34677899999999999999999988877
No 351
>3oky_B Putative uncharacterized protein; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okw_A* 3afc_A* 3al8_A*
Probab=23.71 E-value=2.8e+02 Score=25.73 Aligned_cols=80 Identities=6% Similarity=0.064 Sum_probs=45.6
Q ss_pred eEEEEEeecC--CCceEEEEEccCCCcEEEEecccc-cc-ccCccccceeeeeec--------cccceEEEEEeCCCCEE
Q 036314 67 VSSVNIIKSD--GLKYVTVATASKDQTLRLWKFDAE-EL-VNHPKKIRSFKILRG--------HKASVHSIAAETSGNMV 134 (347)
Q Consensus 67 V~~v~~~~~~--~~~~~~l~s~s~Dg~v~~wd~~~~-~~-~~~~~~~~~~~~~~~--------h~~~V~~v~~s~~~~~l 134 (347)
.+.|++.... ......+..|+++|.|+-.-+..+ .. ....-..+.+..+.. ...+|..+.++++...|
T Consensus 405 lT~IaVd~~~g~~~~ytVlFLGTd~G~l~Kvv~~~~~~~~~~~~~~iEEi~vf~~~~~~~~~~~~~pI~~L~ls~~~~~L 484 (565)
T 3oky_B 405 LTKIAVDNAAGPYQNHTVVFLGSEKGIILKFLARIGSSGFLNGSLFLEEMNVYNPEKCSYDGVEDKRIMGMQLDRASGSL 484 (565)
T ss_dssp EEEEEEEEEETTTTCEEEEEEEETTSEEEEEEECC-----CCCCEEEEEEECCCHHHHCBTTBCCCCCCEEEEEGGGTEE
T ss_pred eEEEEEEEEecCCCceEEEEEECCCCeEEEEEecCCCCccccccEEEEEEEEeccccccccccCCCceEEEEEcCCCCEE
Confidence 4667665421 123567788999998753322211 00 000001112222221 14578899999999999
Q ss_pred EEeeCCCcEEEE
Q 036314 135 CSGSWDCTISLW 146 (347)
Q Consensus 135 ~sgs~Dg~I~iw 146 (347)
+.++.++.++|-
T Consensus 485 YV~s~~~V~qVP 496 (565)
T 3oky_B 485 YVAFSTCVIKVP 496 (565)
T ss_dssp EEECSSCEEEEE
T ss_pred EEEecCeEEEee
Confidence 999999888874
No 352
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=23.63 E-value=3.3e+02 Score=22.96 Aligned_cols=166 Identities=10% Similarity=0.107 Sum_probs=81.4
Q ss_pred ccceEEEE-EeC--CCCEEEEeeCCCcEEEEecCCCCCCCccceeeeccCCCccccccccccccccccCCccceEEEEeC
Q 036314 119 KASVHSIA-AET--SGNMVCSGSWDCTISLWRTNDSDAAGNQVSIKKRKGNNQVEEPQLEGEAISTLVGHTQCVSSVVWP 195 (347)
Q Consensus 119 ~~~V~~v~-~s~--~~~~l~sgs~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 195 (347)
...|.++. +.. +...++..+.+|.|+.-.+.+...... .+.....+.....-+......
T Consensus 94 ~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r------------------~G~~~i~lke~D~lv~~~~~~ 155 (327)
T 3uc1_A 94 EERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRS------------------GGIVAVNLRDNDELVGAVLCS 155 (327)
T ss_dssp TCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCS------------------SCEESCBCCTTCCEEEEEEEC
T ss_pred CCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhcccc------------------CceEEEEECCCCEEEEEEEec
Confidence 34455543 332 467899999999999987654321110 011111222222222222334
Q ss_pred CCCeEEEEecCCcEEEEECC--C----Cc-----eeeeeeeCeeeEEEEeeCCCCcEEEEecCCCcEEEEeCCCCC---C
Q 036314 196 QQETIYSASWDHSVRTWDVE--M----GK-----DLSDIFCGKALNCIDIGGEGSALIAAGGSDPILRIWDPRKPG---T 261 (347)
Q Consensus 196 ~~~~l~s~s~dg~v~vwd~~--~----~~-----~~~~~~~~~~~~~~~~~~~~~~~la~~~~d~~i~iwd~~~~~---~ 261 (347)
..+.|+..+..|.+..+.+. . ++ ....+..+..+..+....++ ..++..+..|.++.-.+..-. +
T Consensus 156 ~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~-~~ll~~T~~G~~Krt~l~e~~~~~R 234 (327)
T 3uc1_A 156 AGDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVREG-TYLLVATSGGYAKRTAIEEYPVQGR 234 (327)
T ss_dssp TTCEEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECCTT-CEEEEEETTSEEEEEEGGGSCBCCT
T ss_pred CCCEEEEEECCCeEEEEECcccccCcCCcCCCCeeeecCCCCCEEEEEEEECCC-CEEEEEeCCCcEEEEEHHHccccCc
Confidence 55677777888887766654 1 11 11122223344444333333 355666788888887653210 1
Q ss_pred -CCCeE--EecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCC
Q 036314 262 -SAPVF--QFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRT 304 (347)
Q Consensus 262 -~~~~~--~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~ 304 (347)
..-.. .+..-.+.+..+....+.. .++..+.+|.+..++...
T Consensus 235 ~~~G~~~~~l~~~~d~lv~~~~~~~~~-~i~l~T~~G~~ir~~~~~ 279 (327)
T 3uc1_A 235 GGKGVLTVMYDRRRGRLVGALIVDDDS-ELYAVTSGGGVIRTAARQ 279 (327)
T ss_dssp TSCCEESSCCCTTTCSEEEEEEECTTC-EEEEEEGGGCEEEEEGGG
T ss_pred CCCcEEEEEecCCCCeEEEEEEeCCCc-cEEEEcCCCeEEEEehhh
Confidence 01111 2222123444444333333 355667777777777643
No 353
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=22.84 E-value=3e+02 Score=25.79 Aligned_cols=92 Identities=11% Similarity=0.033 Sum_probs=54.6
Q ss_pred cEEEEeCCCCCC--CCCeEEecCCCCCeeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCcc-------------ceeecCC
Q 036314 250 ILRIWDPRKPGT--SAPVFQFSSHNSWISACKWHNKSWFHLISASYDGKVMLWDLRTAWP-------------LSVIDSH 314 (347)
Q Consensus 250 ~i~iwd~~~~~~--~~~~~~~~~h~~~v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~-------------~~~~~~h 314 (347)
.+.+.|.+.... ....+.+. -...-..|..+|||.+.++++-.+.++-++|+++-.. ....+--
T Consensus 299 gv~ViD~~~~~~~~~~~~~~iP-~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~G 377 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYVP-VPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELG 377 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEEE-ESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCC
T ss_pred CeeEEccccccccCCceEEEEe-CCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCC
Confidence 467777764111 11222222 2222345889999999888888999999999985211 1111211
Q ss_pred CCeEEEEeec-CCCEEEEccCCceEEEeec
Q 036314 315 KDKVLCADWW-RGDSVISGGVDSKLCVSSG 343 (347)
Q Consensus 315 ~~~v~~~~~~-~~~~l~s~s~D~~v~vw~~ 343 (347)
.++ +-.+|- +|.-..|--.|..|.-|..
T Consensus 378 lGP-lHt~Fd~~G~aYTtlfidSqvvkWni 406 (638)
T 3sbq_A 378 LGP-LHTTFDGRGNAYTTLFIDSQVVKWNM 406 (638)
T ss_dssp SCE-EEEEECSSSEEEEEETTTTEEEEEEH
T ss_pred Ccc-cEEEECCCCceEeeeeecceEEEEec
Confidence 222 445774 4655566667888888863
No 354
>1ukf_A Avirulence protein AVRPPH3; AVRPPHB, hypersensitive response, hydrolase; 1.35A {Pseudomonas syringae PV} SCOP: d.3.1.10
Probab=22.04 E-value=84 Score=24.22 Aligned_cols=33 Identities=9% Similarity=0.062 Sum_probs=22.4
Q ss_pred eeEEEeCCCCCeEEEEEeCCCcEEEEEcCCCcc
Q 036314 275 ISACKWHNKSWFHLISASYDGKVMLWDLRTAWP 307 (347)
Q Consensus 275 v~~v~~s~~~~~~l~s~s~D~~i~lwd~~~~~~ 307 (347)
+.++.|...+..-+++.+.++++.++|.+-|+.
T Consensus 121 llsl~f~~g~aHaia~S~~g~~~tlFDPN~GEF 153 (188)
T 1ukf_A 121 LLSLRFANVQGHAIACSCEGSQFKLFDPNLGEF 153 (188)
T ss_dssp EEEEEETTTEEEEEEEEEETTEEEEEETTTEEE
T ss_pred EEEEEecCCCceeEEeccCCCeEEEeCCCCcee
Confidence 444555544334466667889999999998753
Done!