Query 036317
Match_columns 106
No_of_seqs 102 out of 1151
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 19:42:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036317.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036317hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ymu_A WD-40 repeat protein; u 99.7 2.5E-17 8.6E-22 121.3 12.8 89 3-104 7-109 (577)
2 4h5i_A Guanine nucleotide-exch 99.7 6.1E-17 2.1E-21 115.4 11.2 78 6-94 263-345 (365)
3 2ynn_A Coatomer subunit beta'; 99.7 7E-17 2.4E-21 111.9 11.0 87 8-105 9-109 (304)
4 3ow8_A WD repeat-containing pr 99.7 4E-16 1.4E-20 109.4 12.5 87 7-104 201-301 (321)
5 3zwl_B Eukaryotic translation 99.7 8.1E-16 2.8E-20 106.5 13.2 90 4-104 24-126 (369)
6 4ery_A WD repeat-containing pr 99.7 9.8E-16 3.4E-20 105.6 13.6 89 5-104 16-118 (312)
7 1vyh_C Platelet-activating fac 99.7 3.5E-16 1.2E-20 112.7 11.4 88 6-104 102-203 (410)
8 3ow8_A WD repeat-containing pr 99.7 9.1E-16 3.1E-20 107.5 12.6 86 8-104 160-259 (321)
9 4gqb_B Methylosome protein 50; 99.7 9.9E-16 3.4E-20 108.8 12.2 87 8-104 123-225 (344)
10 2pm7_B Protein transport prote 99.7 1.1E-15 3.7E-20 105.6 11.9 86 8-104 5-110 (297)
11 3fm0_A Protein CIAO1; WDR39,SG 99.7 1E-15 3.5E-20 107.8 11.6 87 7-104 10-116 (345)
12 2ynn_A Coatomer subunit beta'; 99.7 1.1E-15 3.8E-20 105.9 11.3 86 8-104 51-151 (304)
13 1got_B GT-beta; complex (GTP-b 99.7 2.6E-15 9E-20 105.4 13.0 87 7-104 179-281 (340)
14 3bg1_A Protein SEC13 homolog; 99.7 8.8E-16 3E-20 107.0 10.3 86 8-104 9-114 (316)
15 2pbi_B Guanine nucleotide-bind 99.7 3.6E-15 1.2E-19 105.6 13.5 99 6-104 58-207 (354)
16 3fm0_A Protein CIAO1; WDR39,SG 99.6 2.5E-15 8.7E-20 105.8 12.0 85 9-104 58-161 (345)
17 1got_B GT-beta; complex (GTP-b 99.6 5.4E-15 1.8E-19 103.8 13.0 87 7-104 221-323 (340)
18 2xzm_R RACK1; ribosome, transl 99.6 5.2E-15 1.8E-19 103.9 12.7 87 7-104 71-173 (343)
19 3frx_A Guanine nucleotide-bind 99.6 2.5E-15 8.5E-20 104.8 11.0 88 6-104 11-118 (319)
20 4ery_A WD repeat-containing pr 99.6 7.7E-15 2.6E-19 101.1 13.3 86 8-104 61-160 (312)
21 3iz6_a 40S ribosomal protein R 99.6 4.9E-15 1.7E-19 105.5 12.3 87 8-105 245-356 (380)
22 3frx_A Guanine nucleotide-bind 99.6 6.4E-15 2.2E-19 102.8 12.1 87 7-104 60-159 (319)
23 2xzm_R RACK1; ribosome, transl 99.6 6.9E-15 2.4E-19 103.2 12.0 87 7-104 16-129 (343)
24 4gqb_B Methylosome protein 50; 99.6 3.5E-15 1.2E-19 105.9 10.5 80 13-104 83-180 (344)
25 1nr0_A Actin interacting prote 99.6 1.6E-14 5.3E-19 108.8 14.1 98 7-104 54-201 (611)
26 3f3f_A Nucleoporin SEH1; struc 99.6 8.3E-15 2.8E-19 100.1 11.5 86 8-104 7-121 (351)
27 1vyh_C Platelet-activating fac 99.6 7.1E-15 2.4E-19 105.9 11.7 87 7-104 145-245 (410)
28 2hes_X YDR267CP; beta-propelle 99.6 9.5E-15 3.2E-19 102.3 11.4 86 8-104 103-208 (330)
29 3mmy_A MRNA export factor; mRN 99.6 1.7E-14 5.9E-19 99.8 12.2 85 9-104 36-140 (368)
30 4g56_B MGC81050 protein; prote 99.6 1E-14 3.6E-19 103.4 11.3 88 7-104 134-237 (357)
31 2hes_X YDR267CP; beta-propelle 99.6 1.7E-14 5.8E-19 101.0 12.2 84 11-105 57-165 (330)
32 2pbi_B Guanine nucleotide-bind 99.6 2.5E-14 8.5E-19 101.2 13.1 86 8-104 236-337 (354)
33 3iz6_a 40S ribosomal protein R 99.6 6.7E-15 2.3E-19 104.8 9.9 76 6-92 60-139 (380)
34 3vu4_A KMHSV2; beta-propeller 99.6 1.7E-14 5.9E-19 102.1 12.0 78 6-94 189-273 (355)
35 4e54_B DNA damage-binding prot 99.6 1.1E-14 3.7E-19 105.3 11.1 84 10-104 117-220 (435)
36 4g56_B MGC81050 protein; prote 99.6 1.8E-14 6E-19 102.2 11.3 85 10-104 224-322 (357)
37 3lrv_A PRE-mRNA-splicing facto 99.6 2.9E-14 1E-18 99.9 12.2 84 10-104 123-225 (343)
38 4h5i_A Guanine nucleotide-exch 99.6 8.4E-15 2.9E-19 104.3 9.4 85 10-105 217-324 (365)
39 4aow_A Guanine nucleotide-bind 99.6 3.3E-14 1.1E-18 97.9 12.1 77 7-94 33-119 (340)
40 1erj_A Transcriptional repress 99.6 2.7E-14 9.4E-19 102.1 11.6 79 14-103 125-216 (393)
41 3jrp_A Fusion protein of prote 99.6 1.2E-14 4E-19 101.1 9.3 86 8-104 7-112 (379)
42 2ymu_A WD-40 repeat protein; u 99.6 2.6E-14 8.7E-19 105.3 11.4 84 8-104 463-560 (577)
43 1nr0_A Actin interacting prote 99.6 3.8E-14 1.3E-18 106.7 12.2 86 8-104 143-250 (611)
44 3mkq_A Coatomer beta'-subunit; 99.6 2.3E-14 7.7E-19 109.3 11.0 87 8-105 9-109 (814)
45 3sfz_A APAF-1, apoptotic pepti 99.6 4.9E-14 1.7E-18 112.1 13.2 88 6-104 609-710 (1249)
46 1erj_A Transcriptional repress 99.6 9.8E-14 3.4E-18 99.2 13.4 87 7-104 160-267 (393)
47 3dm0_A Maltose-binding peripla 99.6 3E-14 1E-18 108.2 11.0 86 8-104 426-528 (694)
48 4e54_B DNA damage-binding prot 99.6 5.2E-14 1.8E-18 101.6 11.7 88 6-104 158-261 (435)
49 2pm7_B Protein transport prote 99.5 9.6E-14 3.3E-18 95.8 12.3 87 7-104 48-156 (297)
50 3vl1_A 26S proteasome regulato 99.5 8.7E-14 3E-18 98.7 11.8 75 9-94 136-214 (420)
51 1pgu_A Actin interacting prote 99.5 7.5E-14 2.6E-18 102.8 11.8 87 7-104 483-595 (615)
52 2aq5_A Coronin-1A; WD40 repeat 99.5 1.5E-13 5.1E-18 97.9 12.6 87 8-104 77-187 (402)
53 1k8k_C P40, ARP2/3 complex 41 99.5 6.1E-14 2.1E-18 97.6 10.3 83 11-104 7-107 (372)
54 3k26_A Polycomb protein EED; W 99.5 1.4E-13 4.9E-18 95.2 11.9 83 11-104 68-172 (366)
55 1gxr_A ESG1, transducin-like e 99.5 2.7E-13 9.1E-18 92.9 13.1 84 10-104 95-194 (337)
56 4gq1_A NUP37; propeller, trans 99.5 4.3E-14 1.5E-18 101.3 8.6 76 8-94 132-220 (393)
57 3dm0_A Maltose-binding peripla 99.5 1.3E-13 4.4E-18 104.7 11.6 88 7-105 377-484 (694)
58 3dwl_C Actin-related protein 2 99.5 4.2E-14 1.4E-18 99.2 8.3 88 6-104 49-157 (377)
59 3dwl_C Actin-related protein 2 99.5 1.3E-14 4.5E-19 101.8 5.7 82 12-104 11-111 (377)
60 1gxr_A ESG1, transducin-like e 99.5 3E-13 1E-17 92.7 12.1 87 7-104 136-235 (337)
61 1yfq_A Cell cycle arrest prote 99.5 2E-13 6.8E-18 94.2 11.2 88 5-103 3-111 (342)
62 4ggc_A P55CDC, cell division c 99.5 1.9E-13 6.3E-18 93.3 10.8 67 15-94 28-100 (318)
63 3ei3_B DNA damage-binding prot 99.5 1.8E-13 6.3E-18 96.4 10.8 87 7-104 68-174 (383)
64 3f3f_A Nucleoporin SEH1; struc 99.5 1.7E-13 5.7E-18 93.5 10.3 86 5-101 207-346 (351)
65 2j04_A TAU60, YPL007P, hypothe 99.5 1.8E-13 6E-18 104.0 11.2 81 12-104 85-193 (588)
66 2w18_A PALB2, fancn, partner a 99.5 3.7E-13 1.3E-17 97.0 12.4 92 13-104 179-337 (356)
67 3bg1_A Protein SEC13 homolog; 99.5 1.4E-13 4.9E-18 95.8 10.0 88 6-104 51-161 (316)
68 1k8k_C P40, ARP2/3 complex 41 99.5 2.9E-13 1E-17 94.2 11.1 87 7-104 47-153 (372)
69 3lrv_A PRE-mRNA-splicing facto 99.5 4.3E-13 1.5E-17 93.9 11.9 71 12-94 170-246 (343)
70 4aow_A Guanine nucleotide-bind 99.5 8.2E-13 2.8E-17 90.9 12.8 86 7-104 210-317 (340)
71 3odt_A Protein DOA1; ubiquitin 99.5 5.8E-13 2E-17 90.5 11.7 87 6-104 12-115 (313)
72 4ggc_A P55CDC, cell division c 99.5 1.3E-12 4.3E-17 89.2 13.4 98 5-104 60-207 (318)
73 2oaj_A Protein SNI1; WD40 repe 99.5 3.1E-13 1.1E-17 106.4 11.5 84 9-104 14-109 (902)
74 3jrp_A Fusion protein of prote 99.5 7.7E-13 2.6E-17 91.9 11.9 87 7-104 50-158 (379)
75 3jro_A Fusion protein of prote 99.5 1.8E-13 6E-18 105.5 9.4 86 8-104 5-110 (753)
76 2aq5_A Coronin-1A; WD40 repeat 99.5 5.8E-13 2E-17 94.8 11.3 86 8-104 127-231 (402)
77 3mmy_A MRNA export factor; mRN 99.5 1E-12 3.4E-17 90.8 11.9 82 8-100 82-168 (368)
78 3mkq_A Coatomer beta'-subunit; 99.5 3.6E-13 1.2E-17 102.7 10.3 84 9-103 52-150 (814)
79 4gga_A P55CDC, cell division c 99.5 7E-13 2.4E-17 95.2 11.1 78 14-104 107-200 (420)
80 4a11_B DNA excision repair pro 99.5 1.3E-12 4.4E-17 91.6 11.9 86 8-104 39-152 (408)
81 3vl1_A 26S proteasome regulato 99.4 1.1E-12 3.9E-17 92.9 11.0 80 14-104 99-192 (420)
82 3sfz_A APAF-1, apoptotic pepti 99.4 2E-12 6.9E-17 102.8 13.5 89 6-105 651-755 (1249)
83 3k26_A Polycomb protein EED; W 99.4 2.2E-12 7.4E-17 89.2 12.1 75 8-93 111-193 (366)
84 4gga_A P55CDC, cell division c 99.4 3.4E-12 1.2E-16 91.6 13.4 98 5-104 140-287 (420)
85 3zwl_B Eukaryotic translation 99.4 3.7E-12 1.3E-16 88.0 13.0 80 14-104 177-270 (369)
86 2j04_B YDR362CP, TAU91; beta p 99.4 6.1E-13 2.1E-17 99.7 9.5 86 8-104 304-408 (524)
87 3odt_A Protein DOA1; ubiquitin 99.4 2.4E-12 8.2E-17 87.5 11.6 81 11-104 183-277 (313)
88 1sq9_A Antiviral protein SKI8; 99.4 1.3E-12 4.3E-17 92.0 10.4 72 12-94 233-324 (397)
89 1r5m_A SIR4-interacting protei 99.4 1.1E-12 3.8E-17 92.2 10.1 72 11-94 107-182 (425)
90 1r5m_A SIR4-interacting protei 99.4 1.6E-12 5.3E-17 91.4 10.7 82 11-104 44-160 (425)
91 4aez_A CDC20, WD repeat-contai 99.4 2.4E-12 8.2E-17 91.8 11.8 88 8-105 213-315 (401)
92 2pm9_A Protein WEB1, protein t 99.4 1.5E-12 5E-17 92.0 10.4 82 12-104 214-316 (416)
93 4gq1_A NUP37; propeller, trans 99.4 2.7E-13 9.3E-18 97.1 6.3 79 15-104 92-197 (393)
94 2oit_A Nucleoporin 214KDA; NH2 99.4 3.1E-13 1.1E-17 98.7 6.6 81 13-104 93-203 (434)
95 2pm9_A Protein WEB1, protein t 99.4 2.4E-12 8.2E-17 90.9 11.0 88 6-104 107-225 (416)
96 3ei3_B DNA damage-binding prot 99.4 5.1E-12 1.7E-16 89.0 12.6 78 7-95 199-285 (383)
97 3gre_A Serine/threonine-protei 99.4 9.6E-13 3.3E-17 94.2 8.6 72 9-91 60-141 (437)
98 2oit_A Nucleoporin 214KDA; NH2 99.4 1.2E-12 4E-17 95.7 8.8 72 9-91 146-222 (434)
99 2oaj_A Protein SNI1; WD40 repe 99.4 3.7E-12 1.3E-16 100.3 11.8 82 11-104 57-162 (902)
100 1sq9_A Antiviral protein SKI8; 99.4 3.9E-12 1.3E-16 89.4 10.8 83 11-94 290-397 (397)
101 3dw8_B Serine/threonine-protei 99.4 4.1E-12 1.4E-16 90.6 10.6 69 14-94 287-375 (447)
102 3i2n_A WD repeat-containing pr 99.4 3.9E-12 1.3E-16 87.9 9.9 83 9-102 15-120 (357)
103 3gre_A Serine/threonine-protei 99.4 6.9E-12 2.4E-16 89.7 11.5 83 12-105 168-269 (437)
104 3jro_A Fusion protein of prote 99.4 6.9E-12 2.3E-16 96.7 12.2 87 7-104 48-156 (753)
105 2xyi_A Probable histone-bindin 99.4 1.5E-11 5E-16 88.8 13.0 85 9-104 228-332 (430)
106 2vdu_B TRNA (guanine-N(7)-)-me 99.4 6.1E-12 2.1E-16 91.0 11.0 83 11-104 101-206 (450)
107 3i2n_A WD repeat-containing pr 99.4 4.6E-12 1.6E-16 87.5 9.6 73 10-93 207-292 (357)
108 3dw8_B Serine/threonine-protei 99.4 7.6E-12 2.6E-16 89.2 11.0 75 8-94 222-318 (447)
109 2j04_B YDR362CP, TAU91; beta p 99.4 3.3E-12 1.1E-16 95.7 9.4 87 7-104 261-366 (524)
110 4aez_A CDC20, WD repeat-contai 99.4 2.2E-11 7.7E-16 86.8 13.3 84 8-104 172-270 (401)
111 3v7d_B Cell division control p 99.4 7.6E-12 2.6E-16 90.1 10.8 85 8-105 266-364 (464)
112 2xyi_A Probable histone-bindin 99.4 9.8E-12 3.3E-16 89.7 11.4 87 7-104 176-288 (430)
113 2vdu_B TRNA (guanine-N(7)-)-me 99.3 4.6E-12 1.6E-16 91.7 9.2 74 9-94 192-273 (450)
114 1yfq_A Cell cycle arrest prote 99.3 3.3E-12 1.1E-16 88.0 8.0 83 10-104 54-161 (342)
115 3v7d_B Cell division control p 99.3 2E-11 6.9E-16 87.9 12.4 86 6-104 304-402 (464)
116 2hqs_A Protein TOLB; TOLB, PAL 99.3 1.9E-11 6.4E-16 88.5 11.9 83 11-104 177-277 (415)
117 1pgu_A Actin interacting prote 99.3 1.1E-11 3.8E-16 91.2 10.9 71 11-93 530-615 (615)
118 4a11_B DNA excision repair pro 99.3 4.1E-11 1.4E-15 83.9 12.5 88 10-105 97-198 (408)
119 2j04_A TAU60, YPL007P, hypothe 99.3 1.9E-11 6.5E-16 92.9 9.9 68 14-94 131-213 (588)
120 1p22_A F-BOX/WD-repeat protein 99.2 1.2E-10 4.1E-15 83.8 11.6 79 11-104 132-224 (435)
121 2w18_A PALB2, fancn, partner a 99.2 5.3E-11 1.8E-15 85.8 9.5 57 24-91 295-356 (356)
122 1l0q_A Surface layer protein; 99.2 1.2E-10 4E-15 82.0 11.1 81 13-104 32-126 (391)
123 3vu4_A KMHSV2; beta-propeller 99.2 9.9E-11 3.4E-15 82.7 10.7 69 25-104 148-251 (355)
124 1l0q_A Surface layer protein; 99.2 2.7E-10 9.2E-15 80.1 11.9 81 13-104 74-168 (391)
125 3bws_A Protein LP49; two-domai 99.2 1.3E-10 4.4E-15 82.7 9.7 84 10-104 167-264 (433)
126 2ovr_B FBW7, F-BOX/WD repeat p 99.2 1.9E-10 6.6E-15 82.7 9.4 73 8-94 114-190 (445)
127 1p22_A F-BOX/WD-repeat protein 99.1 4.7E-10 1.6E-14 80.7 11.0 82 8-104 252-347 (435)
128 2hqs_A Protein TOLB; TOLB, PAL 99.1 1.2E-09 4.3E-14 78.8 11.9 86 8-104 262-364 (415)
129 1k32_A Tricorn protease; prote 99.1 5.6E-10 1.9E-14 88.5 10.8 84 10-104 376-482 (1045)
130 3bws_A Protein LP49; two-domai 99.1 9.2E-10 3.2E-14 78.3 10.9 84 10-104 209-313 (433)
131 2ovr_B FBW7, F-BOX/WD repeat p 99.1 1.5E-09 5.2E-14 78.0 11.9 83 8-105 275-374 (445)
132 2ecf_A Dipeptidyl peptidase IV 99.1 7.3E-10 2.5E-14 84.1 10.7 80 13-104 37-162 (741)
133 1z68_A Fibroblast activation p 99.0 6.9E-10 2.4E-14 84.2 7.5 68 15-94 62-141 (719)
134 1ri6_A Putative isomerase YBHE 99.0 3E-09 1E-13 72.9 9.3 82 12-104 37-139 (343)
135 1pby_B Quinohemoprotein amine 99.0 5.4E-09 1.8E-13 71.4 10.4 76 13-101 241-319 (337)
136 1xfd_A DIP, dipeptidyl aminope 99.0 1.6E-09 5.6E-14 81.9 8.2 69 14-94 62-145 (723)
137 2ojh_A Uncharacterized protein 99.0 4.1E-09 1.4E-13 70.3 9.3 82 11-104 40-139 (297)
138 2ecf_A Dipeptidyl peptidase IV 99.0 3.4E-09 1.2E-13 80.4 9.7 67 15-94 111-183 (741)
139 3scy_A Hypothetical bacterial 99.0 1.7E-08 5.8E-13 70.6 12.2 81 13-104 211-316 (361)
140 2ojh_A Uncharacterized protein 99.0 2.9E-09 9.8E-14 71.1 7.8 84 10-104 170-282 (297)
141 3o4h_A Acylamino-acid-releasin 98.9 6.6E-10 2.3E-14 82.6 4.9 68 16-94 153-229 (582)
142 1xfd_A DIP, dipeptidyl aminope 98.9 7.8E-10 2.7E-14 83.6 4.6 79 14-104 18-124 (723)
143 1jmx_B Amine dehydrogenase; ox 98.9 1.1E-08 3.6E-13 70.4 9.3 76 13-101 255-334 (349)
144 3u4y_A Uncharacterized protein 98.9 2E-08 7E-13 69.0 10.2 79 14-104 42-138 (331)
145 3vgz_A Uncharacterized protein 98.9 2.9E-08 9.8E-13 68.4 10.6 82 12-104 230-324 (353)
146 3vgz_A Uncharacterized protein 98.8 4.6E-08 1.6E-12 67.4 11.2 81 13-104 185-282 (353)
147 1pby_B Quinohemoprotein amine 98.8 2.7E-08 9.3E-13 67.9 9.6 80 14-104 35-145 (337)
148 2z3z_A Dipeptidyl aminopeptida 98.8 1.4E-08 4.7E-13 76.8 8.6 68 15-93 183-294 (706)
149 1nir_A Nitrite reductase; hemo 98.8 3.1E-08 1.1E-12 74.3 10.0 70 14-94 180-259 (543)
150 3scy_A Hypothetical bacterial 98.8 9.3E-08 3.2E-12 66.8 11.4 79 13-102 259-360 (361)
151 1ri6_A Putative isomerase YBHE 98.8 7.3E-08 2.5E-12 65.9 10.5 80 14-104 232-333 (343)
152 3hfq_A Uncharacterized protein 98.8 1.9E-08 6.6E-13 69.8 7.6 67 13-91 40-116 (347)
153 4a5s_A Dipeptidyl peptidase 4 98.8 2.1E-08 7.2E-13 77.0 8.2 67 16-94 65-143 (740)
154 1z68_A Fibroblast activation p 98.8 6E-09 2.1E-13 79.0 5.1 78 15-104 18-120 (719)
155 2z3z_A Dipeptidyl aminopeptida 98.8 2.9E-08 1E-12 75.0 8.8 66 13-92 82-150 (706)
156 1k32_A Tricorn protease; prote 98.8 4.2E-08 1.4E-12 77.9 10.0 83 10-104 334-431 (1045)
157 1jmx_B Amine dehydrogenase; ox 98.8 3E-08 1E-12 68.1 8.1 80 14-104 44-158 (349)
158 3hfq_A Uncharacterized protein 98.8 1.1E-07 3.9E-12 65.9 11.1 82 12-104 85-197 (347)
159 1nir_A Nitrite reductase; hemo 98.8 2.4E-08 8.1E-13 74.9 7.6 73 19-103 144-231 (543)
160 4a5s_A Dipeptidyl peptidase 4 98.7 4.5E-08 1.6E-12 75.1 9.0 79 13-104 17-122 (740)
161 3pe7_A Oligogalacturonate lyas 98.7 4.8E-08 1.7E-12 68.4 8.3 66 18-94 41-113 (388)
162 3o4h_A Acylamino-acid-releasin 98.7 1.6E-08 5.6E-13 75.1 6.0 70 10-90 192-274 (582)
163 2oiz_A Aromatic amine dehydrog 98.7 1.2E-07 4.2E-12 67.4 9.9 74 17-104 258-358 (361)
164 3azo_A Aminopeptidase; POP fam 98.7 3.9E-08 1.3E-12 73.8 6.7 81 13-104 130-252 (662)
165 2xdw_A Prolyl endopeptidase; a 98.6 1.2E-07 4.2E-12 72.3 8.7 70 14-94 126-219 (710)
166 2bkl_A Prolyl endopeptidase; m 98.6 1.4E-07 4.8E-12 71.9 8.1 70 14-94 122-213 (695)
167 3u4y_A Uncharacterized protein 98.6 3.9E-07 1.3E-11 62.5 9.4 79 15-104 86-186 (331)
168 2gop_A Trilobed protease; beta 98.6 2.6E-07 8.8E-12 63.9 8.5 79 14-104 60-181 (347)
169 1jof_A Carboxy-CIS,CIS-muconat 98.6 1.1E-06 3.7E-11 61.9 11.7 68 13-91 145-223 (365)
170 3azo_A Aminopeptidase; POP fam 98.5 6.8E-07 2.3E-11 67.0 9.8 72 12-94 187-276 (662)
171 1jof_A Carboxy-CIS,CIS-muconat 98.5 2.9E-07 9.9E-12 64.9 6.8 79 14-104 41-155 (365)
172 2dg1_A DRP35, lactonase; beta 98.4 6.8E-06 2.3E-10 56.5 12.1 84 10-104 42-145 (333)
173 3c5m_A Oligogalacturonate lyas 98.4 7.8E-07 2.7E-11 62.1 6.8 69 15-94 38-113 (396)
174 1xip_A Nucleoporin NUP159; bet 98.4 2.9E-06 1E-10 61.7 10.0 74 15-104 90-173 (388)
175 3c5m_A Oligogalacturonate lyas 98.4 2.6E-06 9E-11 59.4 9.1 69 14-94 239-331 (396)
176 3pe7_A Oligogalacturonate lyas 98.4 2.9E-06 9.9E-11 59.3 9.1 90 14-103 82-197 (388)
177 3e5z_A Putative gluconolactona 98.3 6.5E-06 2.2E-10 56.0 10.4 71 12-94 27-101 (296)
178 3fvz_A Peptidyl-glycine alpha- 98.3 1.5E-05 5E-10 55.5 11.1 71 12-93 23-122 (329)
179 1q7f_A NHL, brain tumor CG1071 98.3 2.1E-05 7.2E-10 53.0 11.5 69 13-94 207-282 (286)
180 2oiz_A Aromatic amine dehydrog 98.2 2.8E-06 9.7E-11 60.3 6.5 69 17-96 54-144 (361)
181 1q7f_A NHL, brain tumor CG1071 98.2 3E-05 1E-09 52.3 11.2 81 12-104 163-261 (286)
182 1qks_A Cytochrome CD1 nitrite 98.1 1.9E-05 6.6E-10 59.7 9.9 75 14-99 198-282 (567)
183 2z2n_A Virginiamycin B lyase; 98.1 6.9E-05 2.4E-09 50.1 11.6 78 2-91 4-86 (299)
184 3fvz_A Peptidyl-glycine alpha- 98.1 8.8E-05 3E-09 51.5 11.8 69 14-94 144-229 (329)
185 2dg1_A DRP35, lactonase; beta 98.0 0.00017 5.7E-09 49.5 11.3 82 12-104 86-192 (333)
186 2xdw_A Prolyl endopeptidase; a 98.0 3.3E-05 1.1E-09 58.9 8.4 68 14-92 172-268 (710)
187 2z2n_A Virginiamycin B lyase; 97.9 0.00043 1.5E-08 46.2 12.5 76 6-94 92-172 (299)
188 3e5z_A Putative gluconolactona 97.9 0.0001 3.6E-09 50.0 9.5 81 12-104 68-182 (296)
189 2gop_A Trilobed protease; beta 97.9 4.1E-05 1.4E-09 52.7 7.4 77 14-104 16-114 (347)
190 3g4e_A Regucalcin; six bladed 97.9 7.9E-05 2.7E-09 51.0 8.8 78 14-102 150-249 (297)
191 2mad_H Methylamine dehydrogena 97.9 0.0001 3.5E-09 52.8 9.6 73 15-98 269-356 (373)
192 3sjl_D Methylamine dehydrogena 97.9 3E-05 1E-09 56.4 6.7 72 17-99 82-176 (386)
193 2qc5_A Streptogramin B lactona 97.9 0.0004 1.4E-08 46.4 11.5 79 3-94 10-93 (300)
194 1rwi_B Serine/threonine-protei 97.9 0.00043 1.5E-08 45.8 11.6 81 13-104 150-244 (270)
195 2mad_H Methylamine dehydrogena 97.9 0.00012 4.1E-09 52.4 9.3 68 17-96 70-160 (373)
196 1yr2_A Prolyl oligopeptidase; 97.8 4.8E-05 1.6E-09 58.4 7.5 90 14-104 164-278 (741)
197 3iuj_A Prolyl endopeptidase; h 97.8 2.9E-05 9.8E-10 59.4 6.1 70 13-94 129-219 (693)
198 2bkl_A Prolyl endopeptidase; m 97.8 5E-05 1.7E-09 57.9 7.3 68 16-94 171-263 (695)
199 3dsm_A Uncharacterized protein 97.8 0.00018 6E-09 50.1 9.4 68 14-94 173-255 (328)
200 1qks_A Cytochrome CD1 nitrite 97.8 0.00014 4.6E-09 55.1 8.6 71 21-102 164-248 (567)
201 3no2_A Uncharacterized protein 97.7 0.00018 6E-09 49.4 8.2 74 14-99 126-202 (276)
202 3dsm_A Uncharacterized protein 97.7 0.00028 9.6E-09 49.1 8.9 70 14-97 226-306 (328)
203 1rwi_B Serine/threonine-protei 97.7 0.0005 1.7E-08 45.5 9.8 71 13-94 192-266 (270)
204 1pjx_A Dfpase, DIISOPROPYLFLUO 97.7 0.00081 2.8E-08 45.4 10.9 69 13-92 226-299 (314)
205 2qc5_A Streptogramin B lactona 97.7 0.0017 5.7E-08 43.3 12.4 75 5-91 54-133 (300)
206 1mda_H Methylamine dehydrogena 97.7 0.00026 8.8E-09 51.0 8.5 65 18-94 269-348 (368)
207 3c75_H MADH, methylamine dehyd 97.6 0.00015 5.1E-09 53.3 6.2 70 17-97 122-214 (426)
208 3no2_A Uncharacterized protein 97.6 0.00078 2.7E-08 46.1 9.4 80 6-100 29-115 (276)
209 1xip_A Nucleoporin NUP159; bet 97.5 0.00036 1.2E-08 50.7 7.6 65 13-92 127-191 (388)
210 3dr2_A Exported gluconolactona 97.5 0.0016 5.5E-08 44.5 10.6 69 13-94 45-117 (305)
211 3c75_H MADH, methylamine dehyd 97.5 0.00021 7.2E-09 52.5 6.0 72 17-99 323-409 (426)
212 3sjl_D Methylamine dehydrogena 97.4 0.00061 2.1E-08 49.5 7.8 72 14-96 281-367 (386)
213 1pjx_A Dfpase, DIISOPROPYLFLUO 97.4 0.0012 4.1E-08 44.5 8.8 80 14-104 173-278 (314)
214 1yr2_A Prolyl oligopeptidase; 97.4 0.0006 2.1E-08 52.3 7.7 66 16-93 212-304 (741)
215 2hz6_A Endoplasmic reticulum t 97.3 0.00027 9.3E-09 50.2 5.0 63 23-96 8-72 (369)
216 3g4e_A Regucalcin; six bladed 97.3 0.0035 1.2E-07 42.7 9.9 68 14-94 14-84 (297)
217 2ghs_A AGR_C_1268P; regucalcin 97.2 0.0048 1.7E-07 42.7 10.4 79 14-104 180-282 (326)
218 2qe8_A Uncharacterized protein 97.2 0.0015 5E-08 45.6 7.5 80 14-104 196-301 (343)
219 2ghs_A AGR_C_1268P; regucalcin 97.2 0.0041 1.4E-07 43.1 9.6 68 14-94 50-120 (326)
220 3dr2_A Exported gluconolactona 97.2 0.006 2.1E-07 41.6 10.2 80 13-104 86-198 (305)
221 2xe4_A Oligopeptidase B; hydro 97.2 0.0012 4.2E-08 51.1 7.3 70 14-94 175-258 (751)
222 1mda_H Methylamine dehydrogena 97.1 0.00035 1.2E-08 50.3 3.5 65 17-92 69-158 (368)
223 3hrp_A Uncharacterized protein 97.0 0.0036 1.2E-07 45.1 8.3 69 13-93 131-204 (409)
224 2qe8_A Uncharacterized protein 97.0 0.0078 2.7E-07 41.9 9.6 72 13-94 67-156 (343)
225 1kb0_A Quinohemoprotein alcoho 97.0 0.0016 5.4E-08 50.1 6.3 55 34-99 457-514 (677)
226 2ece_A 462AA long hypothetical 96.8 0.01 3.5E-07 44.1 9.1 68 15-94 140-239 (462)
227 1fwx_A Nitrous oxide reductase 96.8 0.0036 1.2E-07 47.9 6.8 68 14-92 278-361 (595)
228 2iwa_A Glutamine cyclotransfer 96.7 0.032 1.1E-06 38.5 10.9 77 14-102 22-105 (266)
229 1yiq_A Quinohemoprotein alcoho 96.7 0.0033 1.1E-07 48.4 6.4 52 34-96 455-509 (689)
230 3hrp_A Uncharacterized protein 96.7 0.017 5.7E-07 41.6 9.5 67 14-91 324-409 (409)
231 3iuj_A Prolyl endopeptidase; h 96.5 0.012 4.3E-07 44.8 8.3 67 16-94 178-270 (693)
232 2xe4_A Oligopeptidase B; hydro 96.2 0.021 7.2E-07 44.2 7.9 70 16-93 224-305 (751)
233 2hz6_A Endoplasmic reticulum t 96.2 0.00082 2.8E-08 47.7 0.1 65 23-100 91-157 (369)
234 2iwa_A Glutamine cyclotransfer 96.1 0.038 1.3E-06 38.1 8.3 65 18-94 110-183 (266)
235 2p4o_A Hypothetical protein; p 96.1 0.069 2.4E-06 36.4 9.6 71 13-94 32-106 (306)
236 1yiq_A Quinohemoprotein alcoho 95.9 0.072 2.4E-06 41.0 9.6 77 16-103 238-349 (689)
237 3pbp_A Nucleoporin NUP82; beta 95.8 0.24 8.3E-06 36.7 11.8 82 3-93 54-159 (452)
238 3nol_A Glutamine cyclotransfer 95.8 0.1 3.6E-06 35.9 9.2 75 14-101 44-125 (262)
239 2fp8_A Strictosidine synthase; 95.6 0.056 1.9E-06 37.0 7.4 44 3-46 9-52 (322)
240 1kv9_A Type II quinohemoprotei 95.6 0.056 1.9E-06 41.4 8.0 77 15-102 232-343 (668)
241 2ad6_A Methanol dehydrogenase 95.6 0.027 9.3E-07 42.4 6.0 54 33-97 443-499 (571)
242 1npe_A Nidogen, entactin; glyc 95.5 0.25 8.7E-06 32.6 10.2 80 14-105 168-262 (267)
243 1kb0_A Quinohemoprotein alcoho 95.4 0.11 3.8E-06 39.8 9.1 81 15-103 245-357 (677)
244 3nok_A Glutaminyl cyclase; bet 95.4 0.061 2.1E-06 37.3 6.9 64 19-94 140-212 (268)
245 3qqz_A Putative uncharacterize 95.4 0.35 1.2E-05 32.9 10.7 73 8-92 22-100 (255)
246 2ece_A 462AA long hypothetical 95.4 0.1 3.5E-06 38.8 8.4 57 13-80 321-399 (462)
247 3nol_A Glutamine cyclotransfer 95.2 0.086 3E-06 36.4 7.1 64 19-94 131-203 (262)
248 1fwx_A Nitrous oxide reductase 95.1 0.11 3.7E-06 39.9 8.1 68 14-93 196-309 (595)
249 3q7m_A Lipoprotein YFGL, BAMB; 95.0 0.16 5.3E-06 35.3 8.2 61 23-94 52-124 (376)
250 3nok_A Glutaminyl cyclase; bet 95.0 0.27 9.1E-06 34.0 9.1 75 14-101 56-134 (268)
251 2fp8_A Strictosidine synthase; 94.9 0.24 8.1E-06 33.8 8.8 68 14-92 127-216 (322)
252 3mbr_X Glutamine cyclotransfer 94.6 0.2 6.8E-06 34.1 7.5 65 18-94 108-181 (243)
253 1flg_A Protein (quinoprotein e 94.4 0.09 3.1E-06 39.7 6.0 52 33-95 465-519 (582)
254 3mbr_X Glutamine cyclotransfer 94.4 0.72 2.5E-05 31.3 10.0 33 13-46 21-55 (243)
255 3tc9_A Hypothetical hydrolase; 94.3 0.57 2E-05 33.8 10.0 80 13-104 179-280 (430)
256 3tc9_A Hypothetical hydrolase; 94.3 0.35 1.2E-05 34.9 8.9 67 14-91 227-300 (430)
257 1npe_A Nidogen, entactin; glyc 94.2 0.71 2.4E-05 30.4 10.7 68 14-92 37-110 (267)
258 1k3i_A Galactose oxidase precu 94.2 0.25 8.4E-06 37.5 8.0 67 17-94 190-276 (656)
259 1tl2_A L10, protein (tachylect 94.0 0.22 7.7E-06 33.8 6.7 64 14-92 42-116 (236)
260 1kv9_A Type II quinohemoprotei 93.5 0.19 6.6E-06 38.4 6.4 52 34-96 438-492 (668)
261 3q7m_A Lipoprotein YFGL, BAMB; 93.3 0.23 7.9E-06 34.4 6.1 26 74-99 319-344 (376)
262 1flg_A Protein (quinoprotein e 92.8 1.1 3.8E-05 33.7 9.6 76 16-102 249-365 (582)
263 1w6s_A Methanol dehydrogenase 92.5 0.33 1.1E-05 36.9 6.4 54 33-97 452-508 (599)
264 2p4o_A Hypothetical protein; p 92.3 1.8 6E-05 29.3 10.5 69 14-93 73-148 (306)
265 4hw6_A Hypothetical protein, I 91.8 0.78 2.7E-05 33.2 7.4 67 14-91 229-303 (433)
266 2p9w_A MAL S 1 allergenic prot 91.8 2.3 7.9E-05 30.2 9.6 68 14-92 138-215 (334)
267 3hxj_A Pyrrolo-quinoline quino 91.7 0.85 2.9E-05 30.4 7.2 64 14-94 138-205 (330)
268 3pbp_A Nucleoporin NUP82; beta 91.6 1.7 5.9E-05 32.2 9.0 68 12-88 124-208 (452)
269 1cru_A Protein (soluble quinop 91.5 2.5 8.7E-05 30.8 10.0 50 12-61 26-87 (454)
270 2ism_A Putative oxidoreductase 91.0 2.9 9.9E-05 29.2 10.0 46 13-61 31-85 (352)
271 1k3i_A Galactose oxidase precu 90.8 1.4 5E-05 33.2 8.3 68 16-94 246-325 (656)
272 3hxj_A Pyrrolo-quinoline quino 90.1 1.9 6.5E-05 28.7 7.7 68 12-94 214-285 (330)
273 1w6s_A Methanol dehydrogenase 90.0 3.9 0.00013 31.1 10.0 79 17-103 245-353 (599)
274 4gq2_M Nucleoporin NUP120; bet 89.9 2.5 8.6E-05 33.8 9.3 33 14-46 237-269 (950)
275 4hw6_A Hypothetical protein, I 89.6 3.8 0.00013 29.6 9.4 70 13-94 182-261 (433)
276 2ad6_A Methanol dehydrogenase 88.1 4.9 0.00017 30.1 9.4 76 17-103 239-346 (571)
277 4gq2_M Nucleoporin NUP120; bet 88.0 4.5 0.00015 32.4 9.5 21 74-94 248-268 (950)
278 3zwu_A Alkaline phosphatase PH 87.8 2.3 7.8E-05 32.5 7.4 55 14-68 477-548 (592)
279 3a9g_A Putative uncharacterize 87.3 4.2 0.00014 28.5 8.2 48 12-61 28-83 (354)
280 4fhn_B Nucleoporin NUP120; pro 86.6 4.7 0.00016 32.8 9.0 21 74-94 250-270 (1139)
281 3sbq_A Nitrous-oxide reductase 86.6 4.6 0.00016 31.2 8.3 68 14-92 324-408 (638)
282 3sre_A PON1, serum paraoxonase 86.3 2.8 9.5E-05 29.9 6.8 66 13-91 165-251 (355)
283 4a9v_A PHOX; hydrolase, beta-p 85.4 4.2 0.00014 31.2 7.6 56 13-68 476-548 (592)
284 2g8s_A Glucose/sorbosone dehyd 85.2 4 0.00014 28.5 7.1 48 13-61 18-76 (353)
285 3das_A Putative oxidoreductase 84.4 8.5 0.00029 27.3 8.6 49 13-61 32-90 (347)
286 3kya_A Putative phosphatase; s 84.2 6 0.0002 29.5 8.0 66 14-90 248-339 (496)
287 3sre_A PON1, serum paraoxonase 83.6 4.4 0.00015 28.8 6.8 49 14-62 222-278 (355)
288 4a2l_A BT_4663, two-component 83.5 13 0.00045 28.5 11.5 70 13-94 357-438 (795)
289 2p9w_A MAL S 1 allergenic prot 82.3 11 0.00038 26.7 9.4 86 5-101 5-121 (334)
290 4a2l_A BT_4663, two-component 82.2 15 0.00051 28.2 11.6 69 13-94 406-482 (795)
291 3kya_A Putative phosphatase; s 82.1 6 0.00021 29.5 7.3 49 14-62 140-204 (496)
292 3v64_C Agrin; beta propeller, 81.9 11 0.00036 26.2 10.4 80 14-104 117-213 (349)
293 3v65_B Low-density lipoprotein 81.6 11 0.00039 26.4 9.2 68 14-91 117-189 (386)
294 3v64_C Agrin; beta propeller, 80.1 12 0.00042 25.8 10.6 80 14-103 74-168 (349)
295 3qqz_A Putative uncharacterize 78.9 12 0.00043 25.2 8.9 67 13-90 70-149 (255)
296 3v9f_A Two-component system se 76.6 23 0.00079 27.1 10.0 69 13-94 495-570 (781)
297 3das_A Putative oxidoreductase 76.5 5.5 0.00019 28.3 5.3 44 51-105 32-91 (347)
298 1ijq_A LDL receptor, low-densi 76.4 15 0.00052 24.9 10.7 49 14-62 78-131 (316)
299 4fhn_B Nucleoporin NUP120; pro 72.8 4.5 0.00015 32.9 4.5 33 14-46 239-271 (1139)
300 3sov_A LRP-6, low-density lipo 72.7 20 0.00069 24.5 10.0 79 14-103 80-175 (318)
301 3f7f_A Nucleoporin NUP120; nuc 72.6 3.7 0.00013 32.3 3.8 27 74-100 232-258 (729)
302 3v9f_A Two-component system se 70.4 34 0.0011 26.1 10.1 68 12-93 449-525 (781)
303 3p5b_L Low density lipoprotein 68.1 29 0.00099 24.5 11.5 80 14-104 160-256 (400)
304 2be1_A Serine/threonine-protei 67.3 5.6 0.00019 28.1 3.6 59 25-94 11-78 (339)
305 3sov_A LRP-6, low-density lipo 67.0 27 0.00094 23.8 10.5 71 14-96 167-242 (318)
306 2xzh_A Clathrin heavy chain 1; 66.5 34 0.0012 24.7 8.0 39 52-101 261-299 (365)
307 1ijq_A LDL receptor, low-densi 65.2 29 0.00098 23.4 11.2 74 14-99 165-245 (316)
308 1n7d_A LDL receptor, low-densi 65.2 9.2 0.00031 29.4 4.7 49 14-62 454-507 (699)
309 2xn4_A Kelch-like protein 2; s 65.1 23 0.00077 23.4 6.2 61 23-94 204-278 (302)
310 3amr_A 3-phytase; beta-propell 65.1 35 0.0012 24.4 9.8 71 13-94 180-266 (355)
311 2vpj_A Kelch-like protein 12; 64.8 19 0.00063 23.8 5.7 61 23-94 206-280 (301)
312 1cru_A Protein (soluble quinop 63.8 24 0.00081 25.6 6.5 32 52-94 28-59 (454)
313 3v65_B Low-density lipoprotein 63.3 36 0.0012 23.8 9.4 69 14-94 247-320 (386)
314 1n7d_A LDL receptor, low-densi 62.4 20 0.00067 27.6 6.1 69 14-94 541-616 (699)
315 3f7f_A Nucleoporin NUP120; nuc 60.6 15 0.00053 28.8 5.2 25 22-46 229-253 (729)
316 3ii7_A Kelch-like protein 7; p 59.5 33 0.0011 22.6 6.2 62 22-94 54-129 (306)
317 2xzh_A Clathrin heavy chain 1; 59.5 47 0.0016 23.9 10.9 33 14-46 261-293 (365)
318 3m0c_C LDL receptor, low-densi 59.0 64 0.0022 25.4 10.3 81 13-104 424-524 (791)
319 3amr_A 3-phytase; beta-propell 58.4 47 0.0016 23.7 8.2 68 13-91 128-209 (355)
320 3s94_A LRP-6, low-density lipo 55.4 65 0.0022 24.3 10.4 81 14-104 41-137 (619)
321 3s25_A Hypothetical 7-bladed b 51.6 44 0.0015 22.8 5.9 64 17-93 108-177 (302)
322 2xbg_A YCF48-like protein; pho 50.7 55 0.0019 22.1 10.1 64 12-88 162-230 (327)
323 3s94_A LRP-6, low-density lipo 49.0 84 0.0029 23.7 10.4 81 14-104 350-445 (619)
324 3m0c_C LDL receptor, low-densi 48.1 99 0.0034 24.3 11.3 49 14-62 472-525 (791)
325 2be1_A Serine/threonine-protei 48.0 35 0.0012 24.0 5.0 21 74-94 112-132 (339)
326 1bpo_A Protein (clathrin); cla 47.8 86 0.0029 23.5 11.4 33 14-46 260-292 (494)
327 3p5b_L Low density lipoprotein 47.6 70 0.0024 22.5 12.5 72 14-97 247-325 (400)
328 1tl2_A L10, protein (tachylect 47.2 63 0.0022 21.8 6.9 49 16-66 91-150 (236)
329 4asc_A Kelch repeat and BTB do 46.8 60 0.0021 21.5 6.0 62 22-94 147-223 (315)
330 1q47_A Semaphorin 3A; beta pro 46.3 37 0.0012 25.3 5.1 33 6-38 455-487 (495)
331 1bpo_A Protein (clathrin); cla 45.2 95 0.0033 23.3 10.0 52 34-96 226-293 (494)
332 2ism_A Putative oxidoreductase 45.1 73 0.0025 21.9 7.1 50 13-62 75-146 (352)
333 2xbg_A YCF48-like protein; pho 43.9 72 0.0025 21.5 8.6 62 14-89 251-319 (327)
334 1zgk_A Kelch-like ECH-associat 43.6 68 0.0023 21.2 6.4 61 23-94 168-242 (308)
335 2wg3_C Hedgehog-interacting pr 43.5 93 0.0032 22.7 8.8 49 13-61 14-79 (463)
336 4hvt_A Ritya.17583.B, post-pro 42.9 13 0.00044 28.9 2.2 34 55-94 133-167 (711)
337 2woz_A Kelch repeat and BTB do 41.4 75 0.0026 21.0 6.2 24 23-46 206-234 (318)
338 4a0p_A LRP6, LRP-6, low-densit 41.4 1.1E+02 0.0039 23.1 10.6 81 14-104 38-133 (628)
339 3a9g_A Putative uncharacterize 37.0 1E+02 0.0035 21.3 9.8 50 13-62 73-146 (354)
340 4gz8_A Semaphorin-3A; multi-do 37.0 62 0.0021 25.1 5.2 32 7-38 464-495 (667)
341 2g8s_A Glucose/sorbosone dehyd 33.6 1.2E+02 0.0039 20.9 8.0 49 14-62 272-334 (353)
342 2uvk_A YJHT; unknown function, 31.6 1.2E+02 0.004 20.4 6.7 24 23-46 65-98 (357)
343 3mez_B Mannose-specific lectin 31.6 76 0.0026 18.2 7.5 9 54-62 59-67 (113)
344 1zso_A Hypothetical protein; s 30.7 88 0.003 19.8 4.4 28 56-94 115-142 (164)
345 4a9v_A PHOX; hydrolase, beta-p 30.5 64 0.0022 24.8 4.2 19 13-31 531-549 (592)
346 3ei3_A DNA damage-binding prot 30.0 2.3E+02 0.008 23.3 10.4 73 14-94 515-593 (1158)
347 4hvt_A Ritya.17583.B, post-pro 29.4 65 0.0022 25.0 4.2 33 14-46 130-168 (711)
348 3al9_A Plexin-A2; beta-propell 28.4 62 0.0021 24.3 3.9 34 5-38 442-476 (539)
349 4a0p_A LRP6, LRP-6, low-densit 27.2 2E+02 0.0069 21.7 11.0 69 14-94 167-239 (628)
350 3zwu_A Alkaline phosphatase PH 24.2 91 0.0031 23.8 4.1 19 13-31 531-549 (592)
351 1xi4_A Clathrin heavy chain; a 23.4 3.8E+02 0.013 23.5 7.8 32 15-46 261-292 (1630)
352 2zwa_A Leucine carboxyl methyl 23.1 2.5E+02 0.0086 21.4 8.4 63 22-95 499-580 (695)
353 1xi4_A Clathrin heavy chain; a 20.9 4.2E+02 0.015 23.2 7.7 21 74-94 271-291 (1630)
354 3ei3_A DNA damage-binding prot 20.8 3.6E+02 0.012 22.3 9.7 34 13-46 554-594 (1158)
355 1b2p_A Protein (lectin); manno 20.8 1.3E+02 0.0046 17.3 6.5 11 54-64 63-73 (119)
No 1
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.74 E-value=2.5e-17 Score=121.33 Aligned_cols=89 Identities=18% Similarity=0.256 Sum_probs=78.9
Q ss_pred ceeeecCCCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce----eccCCCcEEEEEecCCcceeeeeeecccEEEE
Q 036317 3 FDIFSDGGDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVALSVLILRSWVLE 78 (106)
Q Consensus 3 ~~~~~~~~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t 78 (106)
.+..++.+|.+.|++++|||||+++++++.|++|+|||. +++. ..|.+.+.+++|+||+ ++|++
T Consensus 7 ~e~~~L~GH~~~V~~~a~spdg~~las~~~d~~v~iWd~-~~~~~~~l~gh~~~V~~l~fspdg-----------~~las 74 (577)
T 2ymu_A 7 KERNRLEAHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDG-----------QTIAS 74 (577)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTS-----------SEEEE
T ss_pred EEeeEECCCCCcEEEEEECCCCCEEEEEeCCCEEEEEEC-CCCEEEEEeCCCCCEEEEEECCCC-----------CEEEE
Confidence 356778999999999999999999999999999999995 5555 5577788899999999 99999
Q ss_pred ecCCCcEEEEECCCCC----------CCcEEEeCCC
Q 036317 79 GSGDGSVYAWSARSGK----------EPPVIKWAPG 104 (106)
Q Consensus 79 ~s~d~~i~~wd~~~~~----------~v~~i~~sp~ 104 (106)
++.|++|++||+. ++ .|.+++|+|+
T Consensus 75 ~~~d~~i~vWd~~-~~~~~~~~~~~~~v~~~~~s~d 109 (577)
T 2ymu_A 75 ASDDKTVKLWNRN-GQLLQTLTGHSSSVRGVAFSPD 109 (577)
T ss_dssp EETTSCEEEEETT-SCEEEEECCCSSCEEEEEECTT
T ss_pred EeCCCEEEEEECC-CCEEEEEECCCCCEEEEEECCC
Confidence 9999999999974 44 8899999986
No 2
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.72 E-value=6.1e-17 Score=115.40 Aligned_cols=78 Identities=10% Similarity=0.089 Sum_probs=69.0
Q ss_pred eecCCCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce-----eccCCCcEEEEEecCCcceeeeeeecccEEEEec
Q 036317 6 FSDGGDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL-----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGS 80 (106)
Q Consensus 6 ~~~~~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~-----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s 80 (106)
..+.++...|++++|||||+++++++.|++|+|||+.+++. ..|...+.+++||||| ++|++||
T Consensus 263 ~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg-----------~~laS~S 331 (365)
T 4h5i_A 263 KQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDS-----------TYVASVS 331 (365)
T ss_dssp EEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTS-----------CEEEEEE
T ss_pred eeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCC-----------CEEEEEe
Confidence 34556677999999999999999999999999999999886 3467788999999999 9999999
Q ss_pred CCCcEEEEECCCCC
Q 036317 81 GDGSVYAWSARSGK 94 (106)
Q Consensus 81 ~d~~i~~wd~~~~~ 94 (106)
.|++|+|||+....
T Consensus 332 ~D~tvrvw~ip~~~ 345 (365)
T 4h5i_A 332 AANTIHIIKLPLNY 345 (365)
T ss_dssp TTSEEEEEECCTTT
T ss_pred CCCeEEEEEcCCCC
Confidence 99999999997543
No 3
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.72 E-value=7e-17 Score=111.94 Aligned_cols=87 Identities=14% Similarity=0.211 Sum_probs=77.9
Q ss_pred cCCCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce----eccCCCcEEEEEecCCcceeeeeeecccEEEEecCCC
Q 036317 8 DGGDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDG 83 (106)
Q Consensus 8 ~~~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~ 83 (106)
+.+|.+.|.+++|+|||+++++++.|+++++||..+++. ..+...+..+.|+|++ ++|++|+.|+
T Consensus 9 ~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~-----------~~l~s~s~d~ 77 (304)
T 2ynn_A 9 FSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARK-----------NWIIVGSDDF 77 (304)
T ss_dssp EEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGG-----------TEEEEEETTS
T ss_pred ecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCC-----------CEEEEECCCC
Confidence 456778999999999999999999999999999998876 4456677889999999 9999999999
Q ss_pred cEEEEECCCCC----------CCcEEEeCCCC
Q 036317 84 SVYAWSARSGK----------EPPVIKWAPGS 105 (106)
Q Consensus 84 ~i~~wd~~~~~----------~v~~i~~sp~~ 105 (106)
+|++||+++++ .|.+++|+|+.
T Consensus 78 ~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~ 109 (304)
T 2ynn_A 78 RIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTK 109 (304)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEECSSS
T ss_pred EEEEEECCCCcEEEEEeCCCCcEEEEEEcCCC
Confidence 99999999987 78999999863
No 4
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.69 E-value=4e-16 Score=109.36 Aligned_cols=87 Identities=17% Similarity=0.260 Sum_probs=78.0
Q ss_pred ecCCCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce----eccCCCcEEEEEecCCcceeeeeeecccEEEEecCC
Q 036317 7 SDGGDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGD 82 (106)
Q Consensus 7 ~~~~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d 82 (106)
.+.++...|++++|+|+|+++++++.|+.|++||..+++. ..+...+..++|+|++ ++|++++.|
T Consensus 201 ~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~-----------~~l~s~s~D 269 (321)
T 3ow8_A 201 TLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDD-----------THFVSSSSD 269 (321)
T ss_dssp EECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTS-----------SEEEEEETT
T ss_pred EEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCC-----------CEEEEEeCC
Confidence 4456777999999999999999999999999999988876 4466778899999999 999999999
Q ss_pred CcEEEEECCCCC----------CCcEEEeCCC
Q 036317 83 GSVYAWSARSGK----------EPPVIKWAPG 104 (106)
Q Consensus 83 ~~i~~wd~~~~~----------~v~~i~~sp~ 104 (106)
++|++||+++++ .|.+++|+|+
T Consensus 270 ~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~ 301 (321)
T 3ow8_A 270 KSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGN 301 (321)
T ss_dssp SCEEEEETTTTEEEEEECCCSSCEEEEEECTT
T ss_pred CcEEEEeCCCCEEEEEEcCCCCcEEEEEECCC
Confidence 999999999876 7889999986
No 5
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.69 E-value=8.1e-16 Score=106.53 Aligned_cols=90 Identities=17% Similarity=0.296 Sum_probs=81.5
Q ss_pred eeeecCCCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce----eccCCCcEEEEEecCCcceeeeeeecccEEEEe
Q 036317 4 DIFSDGGDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEG 79 (106)
Q Consensus 4 ~~~~~~~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~ 79 (106)
....+.+|.+.|++++|+|+|+++++++.|+.+++||..+++. ..+...+..+.|+|++ ++++++
T Consensus 24 ~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~-----------~~l~s~ 92 (369)
T 3zwl_B 24 KAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFT-----------KYCVTG 92 (369)
T ss_dssp EEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTS-----------SEEEEE
T ss_pred ccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCC-----------CEEEEE
Confidence 5567788999999999999999999999999999999998876 4466778899999999 999999
Q ss_pred cCCCcEEEEECCCCC---------CCcEEEeCCC
Q 036317 80 SGDGSVYAWSARSGK---------EPPVIKWAPG 104 (106)
Q Consensus 80 s~d~~i~~wd~~~~~---------~v~~i~~sp~ 104 (106)
+.|+.|++||+++++ .+.+++|+|+
T Consensus 93 ~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~ 126 (369)
T 3zwl_B 93 SADYSIKLWDVSNGQCVATWKSPVPVKRVEFSPC 126 (369)
T ss_dssp ETTTEEEEEETTTCCEEEEEECSSCEEEEEECTT
T ss_pred eCCCeEEEEECCCCcEEEEeecCCCeEEEEEccC
Confidence 999999999999987 7888999886
No 6
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.69 E-value=9.8e-16 Score=105.63 Aligned_cols=89 Identities=18% Similarity=0.342 Sum_probs=79.9
Q ss_pred eeecCCCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce----eccCCCcEEEEEecCCcceeeeeeecccEEEEec
Q 036317 5 IFSDGGDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGS 80 (106)
Q Consensus 5 ~~~~~~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s 80 (106)
.+.+.+|.+.|++++|+|+|+++++++.|+.+++||..+++. ..+...+..+.|+|++ ++|++++
T Consensus 16 ~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~-----------~~l~s~~ 84 (312)
T 4ery_A 16 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS-----------NLLVSAS 84 (312)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTS-----------SEEEEEE
T ss_pred EEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCC-----------CEEEEEC
Confidence 456678889999999999999999999999999999988876 4466678889999999 9999999
Q ss_pred CCCcEEEEECCCCC----------CCcEEEeCCC
Q 036317 81 GDGSVYAWSARSGK----------EPPVIKWAPG 104 (106)
Q Consensus 81 ~d~~i~~wd~~~~~----------~v~~i~~sp~ 104 (106)
.|+.|++||+++++ .|.+++|+|+
T Consensus 85 ~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~ 118 (312)
T 4ery_A 85 DDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ 118 (312)
T ss_dssp TTSEEEEEETTTCCEEEEEECCSSCEEEEEECSS
T ss_pred CCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCC
Confidence 99999999999887 6788899886
No 7
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.68 E-value=3.5e-16 Score=112.68 Aligned_cols=88 Identities=16% Similarity=0.191 Sum_probs=79.7
Q ss_pred eecCCCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce----eccCCCcEEEEEecCCcceeeeeeecccEEEEecC
Q 036317 6 FSDGGDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSG 81 (106)
Q Consensus 6 ~~~~~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~ 81 (106)
+.+.+|.++|++++|+|+++++++++.|++|++||..+++. ..+...+..++|+|++ +++++|+.
T Consensus 102 ~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~-----------~~l~sgs~ 170 (410)
T 1vyh_C 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG-----------KLLASCSA 170 (410)
T ss_dssp CEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTS-----------SEEEEEET
T ss_pred EeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCC-----------CEEEEEeC
Confidence 45567888999999999999999999999999999999876 4567788899999999 99999999
Q ss_pred CCcEEEEECCCCC----------CCcEEEeCCC
Q 036317 82 DGSVYAWSARSGK----------EPPVIKWAPG 104 (106)
Q Consensus 82 d~~i~~wd~~~~~----------~v~~i~~sp~ 104 (106)
|++|++||+++++ .|.+++|+|+
T Consensus 171 D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~ 203 (410)
T 1vyh_C 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPN 203 (410)
T ss_dssp TSCCCEEETTSSCEEECCCCCSSCEEEEEECSS
T ss_pred CCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCC
Confidence 9999999999876 7899999986
No 8
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.68 E-value=9.1e-16 Score=107.53 Aligned_cols=86 Identities=15% Similarity=0.206 Sum_probs=76.3
Q ss_pred cCCCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce----eccCCCcEEEEEecCCcceeeeeeecccEEEEecCCC
Q 036317 8 DGGDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDG 83 (106)
Q Consensus 8 ~~~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~ 83 (106)
+..+...|.+++|+|||+++++++.|+.|++||..+++. ..+...+..++|+|++ ++|++|+.|+
T Consensus 160 ~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~-----------~~l~s~s~dg 228 (321)
T 3ow8_A 160 LDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDS-----------QLLVTASDDG 228 (321)
T ss_dssp EECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTS-----------CEEEEECTTS
T ss_pred ecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCC-----------CEEEEEcCCC
Confidence 334456899999999999999999999999999999876 3466678899999999 9999999999
Q ss_pred cEEEEECCCCC----------CCcEEEeCCC
Q 036317 84 SVYAWSARSGK----------EPPVIKWAPG 104 (106)
Q Consensus 84 ~i~~wd~~~~~----------~v~~i~~sp~ 104 (106)
+|++||+++++ .|.+++|+|+
T Consensus 229 ~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~ 259 (321)
T 3ow8_A 229 YIKIYDVQHANLAGTLSGHASWVLNVAFCPD 259 (321)
T ss_dssp CEEEEETTTCCEEEEECCCSSCEEEEEECTT
T ss_pred eEEEEECCCcceeEEEcCCCCceEEEEECCC
Confidence 99999999876 6889999986
No 9
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.67 E-value=9.9e-16 Score=108.77 Aligned_cols=87 Identities=20% Similarity=0.223 Sum_probs=75.9
Q ss_pred cCCCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce----eccCCCcEEEEEecCCcceeeeeeecccEEEEecCCC
Q 036317 8 DGGDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDG 83 (106)
Q Consensus 8 ~~~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~ 83 (106)
..+|.+.|++++|+|||+++++++.|++|++||+.+++. ..|.+.+..+.|+|++ +..+++++.|+
T Consensus 123 ~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~----------~~~l~s~s~D~ 192 (344)
T 4gqb_B 123 KYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHK----------DSVFLSCSEDN 192 (344)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSC----------TTEEEEEETTS
T ss_pred ccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCC----------CCceeeecccc
Confidence 346778999999999999999999999999999999887 4567788899999998 23678999999
Q ss_pred cEEEEECCCCC------------CCcEEEeCCC
Q 036317 84 SVYAWSARSGK------------EPPVIKWAPG 104 (106)
Q Consensus 84 ~i~~wd~~~~~------------~v~~i~~sp~ 104 (106)
+|++||+++++ .+.+++|+|.
T Consensus 193 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~ 225 (344)
T 4gqb_B 193 RILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQ 225 (344)
T ss_dssp CEEEEETTSSSCEEECC----CCCEEEEEECSS
T ss_pred ccccccccccceeeeeecceeeccceeeeecCC
Confidence 99999999887 4678899884
No 10
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.67 E-value=1.1e-15 Score=105.64 Aligned_cols=86 Identities=15% Similarity=0.277 Sum_probs=74.5
Q ss_pred cCCCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCC--ce----eccCCCcEEEEEecC--CcceeeeeeecccEEEEe
Q 036317 8 DGGDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQG--TL----PVSHNSTLEASFSQH--LSLVALSVLILRSWVLEG 79 (106)
Q Consensus 8 ~~~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~--~~----~~~~~~~~~~~fs~d--~~~~~~~~~~~~~~i~t~ 79 (106)
+.+|.+.|.+++|+|+|+++++++.|++|+|||..++ +. ..|.+.+..+.|+|+ + ++|++|
T Consensus 5 ~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g-----------~~l~s~ 73 (297)
T 2pm7_B 5 ANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFG-----------TILASC 73 (297)
T ss_dssp CCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGC-----------SEEEEE
T ss_pred ccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcC-----------CEEEEE
Confidence 4678889999999999999999999999999998653 22 557778889999864 8 899999
Q ss_pred cCCCcEEEEECCCCC------------CCcEEEeCCC
Q 036317 80 SGDGSVYAWSARSGK------------EPPVIKWAPG 104 (106)
Q Consensus 80 s~d~~i~~wd~~~~~------------~v~~i~~sp~ 104 (106)
+.|++|++||+++++ .|.+++|+|.
T Consensus 74 s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~ 110 (297)
T 2pm7_B 74 SYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPH 110 (297)
T ss_dssp ETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCG
T ss_pred cCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcC
Confidence 999999999998763 6889999985
No 11
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.66 E-value=1e-15 Score=107.84 Aligned_cols=87 Identities=13% Similarity=0.184 Sum_probs=76.2
Q ss_pred ecCCCCC-CeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce-------eccCCCcEEEEEecCCcceeeeeeecccEEEE
Q 036317 7 SDGGDVS-DANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL-------PVSHNSTLEASFSQHLSLVALSVLILRSWVLE 78 (106)
Q Consensus 7 ~~~~~~~-~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~-------~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t 78 (106)
.+.+|.. +|..++|+|||+++++++.|++|+|||..+++. ..+...+..++|+|++ ++|++
T Consensus 10 ~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g-----------~~l~s 78 (345)
T 3fm0_A 10 RVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCG-----------NYLAS 78 (345)
T ss_dssp EECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTS-----------SEEEE
T ss_pred eecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCC-----------CEEEE
Confidence 4567776 999999999999999999999999999988753 3466678899999999 99999
Q ss_pred ecCCCcEEEEECCCCC------------CCcEEEeCCC
Q 036317 79 GSGDGSVYAWSARSGK------------EPPVIKWAPG 104 (106)
Q Consensus 79 ~s~d~~i~~wd~~~~~------------~v~~i~~sp~ 104 (106)
|+.|+++++||+.++. .|.+++|+|+
T Consensus 79 ~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~ 116 (345)
T 3fm0_A 79 ASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPS 116 (345)
T ss_dssp EETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTT
T ss_pred EECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCC
Confidence 9999999999988763 7899999986
No 12
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.66 E-value=1.1e-15 Score=105.88 Aligned_cols=86 Identities=14% Similarity=0.126 Sum_probs=76.8
Q ss_pred cCCCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce----eccCCCcEEEEEecCCcceeeeeeecccEEEEecCCC
Q 036317 8 DGGDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDG 83 (106)
Q Consensus 8 ~~~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~ 83 (106)
+..+...|.+++|+|+++++++++.|++|++||..+++. ..+...+..++|+|++ +++++|+.|+
T Consensus 51 ~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~-----------~~l~sgs~D~ 119 (304)
T 2ynn_A 51 IQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTK-----------PYVLSGSDDL 119 (304)
T ss_dssp EECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSS-----------SEEEEEETTS
T ss_pred eeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCC-----------CEEEEECCCC
Confidence 345567899999999999999999999999999999876 4577788899999999 9999999999
Q ss_pred cEEEEECCCCC-----------CCcEEEeCCC
Q 036317 84 SVYAWSARSGK-----------EPPVIKWAPG 104 (106)
Q Consensus 84 ~i~~wd~~~~~-----------~v~~i~~sp~ 104 (106)
+|++||++++. .|.+++|+|.
T Consensus 120 ~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~ 151 (304)
T 2ynn_A 120 TVKLWNWENNWALEQTFEGHEHFVMCVAFNPK 151 (304)
T ss_dssp CEEEEEGGGTTEEEEEECCCCSCEEEEEECTT
T ss_pred eEEEEECCCCcchhhhhcccCCcEEEEEECCC
Confidence 99999998773 7899999984
No 13
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.65 E-value=2.6e-15 Score=105.40 Aligned_cols=87 Identities=14% Similarity=0.184 Sum_probs=77.1
Q ss_pred ecCCCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce----eccCCCcEEEEEecCCcceeeeeeecccEEEEecCC
Q 036317 7 SDGGDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGD 82 (106)
Q Consensus 7 ~~~~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d 82 (106)
.+.+|.+.|.+++|+|+++++++++.|+.+++||..+++. ..+...+..++|+|++ +++++|+.|
T Consensus 179 ~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~-----------~~l~s~s~d 247 (340)
T 1got_B 179 TFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNG-----------NAFATGSDD 247 (340)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTS-----------SEEEEEETT
T ss_pred EEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCC-----------CEEEEEcCC
Confidence 3456778999999999999999999999999999998876 4466678899999999 999999999
Q ss_pred CcEEEEECCCCC------------CCcEEEeCCC
Q 036317 83 GSVYAWSARSGK------------EPPVIKWAPG 104 (106)
Q Consensus 83 ~~i~~wd~~~~~------------~v~~i~~sp~ 104 (106)
++|++||+++++ .|.+++|+|+
T Consensus 248 ~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~ 281 (340)
T 1got_B 248 ATCRLFDLRADQELMTYSHDNIICGITSVSFSKS 281 (340)
T ss_dssp SCEEEEETTTTEEEEEECCTTCCSCEEEEEECTT
T ss_pred CcEEEEECCCCcEEEEEccCCcccceEEEEECCC
Confidence 999999998765 4788999986
No 14
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.65 E-value=8.8e-16 Score=107.02 Aligned_cols=86 Identities=13% Similarity=0.234 Sum_probs=72.3
Q ss_pred cCCCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce------eccCCCcEEEEEec--CCcceeeeeeecccEEEEe
Q 036317 8 DGGDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL------PVSHNSTLEASFSQ--HLSLVALSVLILRSWVLEG 79 (106)
Q Consensus 8 ~~~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~------~~~~~~~~~~~fs~--d~~~~~~~~~~~~~~i~t~ 79 (106)
+.+|.+.|++++|+|+|+++++++.|++++|||+.++.. ..|.+.+..++|+| ++ ++|++|
T Consensus 9 ~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~-----------~~l~s~ 77 (316)
T 3bg1_A 9 DTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYG-----------NILASC 77 (316)
T ss_dssp -----CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGS-----------SCEEEE
T ss_pred cccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCC-----------CEEEEE
Confidence 357788999999999999999999999999999987642 45777888999986 48 899999
Q ss_pred cCCCcEEEEECCCCC------------CCcEEEeCCC
Q 036317 80 SGDGSVYAWSARSGK------------EPPVIKWAPG 104 (106)
Q Consensus 80 s~d~~i~~wd~~~~~------------~v~~i~~sp~ 104 (106)
+.|++|++||+++++ .|.+++|+|.
T Consensus 78 s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~ 114 (316)
T 3bg1_A 78 SYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPH 114 (316)
T ss_dssp ETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCT
T ss_pred ECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCC
Confidence 999999999998863 7899999996
No 15
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.65 E-value=3.6e-15 Score=105.61 Aligned_cols=99 Identities=18% Similarity=0.274 Sum_probs=79.8
Q ss_pred eecCCCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce----eccCCCcEEEEEecCCcceeeee------------
Q 036317 6 FSDGGDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVALSV------------ 69 (106)
Q Consensus 6 ~~~~~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~~~------------ 69 (106)
-.+.+|.+.|.+++|+|||+++++++.|+++++||..+++. ..+...+..+.|+|+++++|...
T Consensus 58 ~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~ 137 (354)
T 2pbi_B 58 RTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTF 137 (354)
T ss_dssp EEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCC
T ss_pred EEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEec
Confidence 34568889999999999999999999999999999988766 33555677888888888776321
Q ss_pred -------------------------eecccEEEEecCCCcEEEEECCCCC----------CCcEEEeCCC
Q 036317 70 -------------------------LILRSWVLEGSGDGSVYAWSARSGK----------EPPVIKWAPG 104 (106)
Q Consensus 70 -------------------------~~~~~~i~t~s~d~~i~~wd~~~~~----------~v~~i~~sp~ 104 (106)
....+.|++++.|++|++||+++++ .|.+++|+|.
T Consensus 138 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~ 207 (354)
T 2pbi_B 138 DKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPS 207 (354)
T ss_dssp CTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCC
T ss_pred cccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeC
Confidence 1223579999999999999999887 6778888774
No 16
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.64 E-value=2.5e-15 Score=105.79 Aligned_cols=85 Identities=15% Similarity=0.280 Sum_probs=74.8
Q ss_pred CCCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce------eccCCCcEEEEEecCCcceeeeeeecccEEEEecCC
Q 036317 9 GGDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL------PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGD 82 (106)
Q Consensus 9 ~~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~------~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d 82 (106)
.+|...|.+++|+|+|+++++++.|+++++||..++.. ..+...+..++|+|++ ++|++|+.|
T Consensus 58 ~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~-----------~~l~s~s~D 126 (345)
T 3fm0_A 58 EGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSG-----------NLLATCSRD 126 (345)
T ss_dssp SSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTS-----------SEEEEEETT
T ss_pred cccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCC-----------CEEEEEECC
Confidence 56778999999999999999999999999999887643 4566788899999999 999999999
Q ss_pred CcEEEEECCCCC-------------CCcEEEeCCC
Q 036317 83 GSVYAWSARSGK-------------EPPVIKWAPG 104 (106)
Q Consensus 83 ~~i~~wd~~~~~-------------~v~~i~~sp~ 104 (106)
++|++||+++++ .|.+++|+|+
T Consensus 127 ~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~ 161 (345)
T 3fm0_A 127 KSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPS 161 (345)
T ss_dssp SCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSS
T ss_pred CeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCC
Confidence 999999998753 6888999986
No 17
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.64 E-value=5.4e-15 Score=103.81 Aligned_cols=87 Identities=15% Similarity=0.122 Sum_probs=75.4
Q ss_pred ecCCCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce---ec---cCCCcEEEEEecCCcceeeeeeecccEEEEec
Q 036317 7 SDGGDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL---PV---SHNSTLEASFSQHLSLVALSVLILRSWVLEGS 80 (106)
Q Consensus 7 ~~~~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~---~~---~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s 80 (106)
.+.+|...|++++|+|+|+++++++.|+.+++||..+++. .. ....+..++|+|++ +++++|+
T Consensus 221 ~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g-----------~~l~~g~ 289 (340)
T 1got_B 221 TFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSG-----------RLLLAGY 289 (340)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTS-----------SEEEEEE
T ss_pred EEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCC-----------CEEEEEC
Confidence 3456777999999999999999999999999999988765 11 22356789999999 9999999
Q ss_pred CCCcEEEEECCCCC----------CCcEEEeCCC
Q 036317 81 GDGSVYAWSARSGK----------EPPVIKWAPG 104 (106)
Q Consensus 81 ~d~~i~~wd~~~~~----------~v~~i~~sp~ 104 (106)
.|+.|++||+.+++ .|.+++|+|+
T Consensus 290 ~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~d 323 (340)
T 1got_B 290 DDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDD 323 (340)
T ss_dssp TTSEEEEEETTTCCEEEEEECCSSCEEEEEECTT
T ss_pred CCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCC
Confidence 99999999998876 8899999986
No 18
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.63 E-value=5.2e-15 Score=103.87 Aligned_cols=87 Identities=11% Similarity=0.200 Sum_probs=76.6
Q ss_pred ecCCCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce----eccCCCcEEEEEecCCcceeeeeeecccEEEEecCC
Q 036317 7 SDGGDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGD 82 (106)
Q Consensus 7 ~~~~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d 82 (106)
.+.+|...|.+++|+|+++++++++.|+++++||+.+++. ..+...+..++|+|++ ++|++++.|
T Consensus 71 ~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~-----------~~l~s~~~d 139 (343)
T 2xzm_R 71 ALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDN-----------RQILSAGAE 139 (343)
T ss_dssp EECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSST-----------TEEEEEETT
T ss_pred hhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCC-----------CEEEEEcCC
Confidence 3467788999999999999999999999999999998876 4567788899999999 999999999
Q ss_pred CcEEEEECCCCC------------CCcEEEeCCC
Q 036317 83 GSVYAWSARSGK------------EPPVIKWAPG 104 (106)
Q Consensus 83 ~~i~~wd~~~~~------------~v~~i~~sp~ 104 (106)
++|++||+.... .+.+++|+|.
T Consensus 140 ~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~ 173 (343)
T 2xzm_R 140 REIKLWNILGECKFSSAEKENHSDWVSCVRYSPI 173 (343)
T ss_dssp SCEEEEESSSCEEEECCTTTSCSSCEEEEEECCC
T ss_pred CEEEEEeccCCceeeeecccCCCceeeeeeeccc
Confidence 999999986321 6889999985
No 19
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.63 E-value=2.5e-15 Score=104.83 Aligned_cols=88 Identities=10% Similarity=0.103 Sum_probs=76.3
Q ss_pred eecCCCCCCeeEEEECCCC-CeEEEEeCCCeEEEEEcCCCce---------eccCCCcEEEEEecCCcceeeeeeecccE
Q 036317 6 FSDGGDVSDANEVKLSNDG-RLMLLTTLEGHIHVLHSFQGTL---------PVSHNSTLEASFSQHLSLVALSVLILRSW 75 (106)
Q Consensus 6 ~~~~~~~~~v~~v~~spdg-~~l~~~~~~~~i~l~d~~~~~~---------~~~~~~~~~~~fs~d~~~~~~~~~~~~~~ 75 (106)
-.+.+|.+.|.+++|+|++ +++++++.|+++++||..+... ..|...+..+.|+|++ ++
T Consensus 11 ~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg-----------~~ 79 (319)
T 3frx_A 11 GTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADG-----------AY 79 (319)
T ss_dssp EEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTS-----------SE
T ss_pred EEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCC-----------CE
Confidence 3567899999999999965 8899999999999999864221 4567778889999999 99
Q ss_pred EEEecCCCcEEEEECCCCC----------CCcEEEeCCC
Q 036317 76 VLEGSGDGSVYAWSARSGK----------EPPVIKWAPG 104 (106)
Q Consensus 76 i~t~s~d~~i~~wd~~~~~----------~v~~i~~sp~ 104 (106)
+++|+.|++|++||+++++ .|.+++|+|+
T Consensus 80 l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~ 118 (319)
T 3frx_A 80 ALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKK 118 (319)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTT
T ss_pred EEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCC
Confidence 9999999999999999986 7889999886
No 20
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.63 E-value=7.7e-15 Score=101.13 Aligned_cols=86 Identities=19% Similarity=0.315 Sum_probs=77.1
Q ss_pred cCCCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce----eccCCCcEEEEEecCCcceeeeeeecccEEEEecCCC
Q 036317 8 DGGDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDG 83 (106)
Q Consensus 8 ~~~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~ 83 (106)
+.++...|.+++|+|+|+++++++.|+.+++||..+++. ..+...+..+.|+|++ +++++|+.|+
T Consensus 61 ~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~-----------~~l~s~~~d~ 129 (312)
T 4ery_A 61 ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS-----------NLIVSGSFDE 129 (312)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSS-----------SEEEEEETTS
T ss_pred hccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCC-----------CEEEEEeCCC
Confidence 456677999999999999999999999999999998876 4466678889999999 9999999999
Q ss_pred cEEEEECCCCC----------CCcEEEeCCC
Q 036317 84 SVYAWSARSGK----------EPPVIKWAPG 104 (106)
Q Consensus 84 ~i~~wd~~~~~----------~v~~i~~sp~ 104 (106)
+|++||+++++ .+.++.|+|+
T Consensus 130 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~ 160 (312)
T 4ery_A 130 SVRIWDVKTGKCLKTLPAHSDPVSAVHFNRD 160 (312)
T ss_dssp CEEEEETTTCCEEEEECCCSSCEEEEEECTT
T ss_pred cEEEEECCCCEEEEEecCCCCcEEEEEEcCC
Confidence 99999999887 7888999886
No 21
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.63 E-value=4.9e-15 Score=105.54 Aligned_cols=87 Identities=17% Similarity=0.249 Sum_probs=74.1
Q ss_pred cCCCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce----ec-------cCCCcEEEEEecCCcceeeeeeecccEE
Q 036317 8 DGGDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL----PV-------SHNSTLEASFSQHLSLVALSVLILRSWV 76 (106)
Q Consensus 8 ~~~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~----~~-------~~~~~~~~~fs~d~~~~~~~~~~~~~~i 76 (106)
+.+|.+.|++++|+|+|+++++++.|+++++||..+++. .. ....+..++|+|+| +++
T Consensus 245 ~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g-----------~~l 313 (380)
T 3iz6_a 245 YHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISG-----------RLL 313 (380)
T ss_dssp ECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSS-----------SEE
T ss_pred ECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCC-----------CEE
Confidence 346778999999999999999999999999999998875 11 11235689999999 999
Q ss_pred EEecCCCcEEEEECCCCC--------------CCcEEEeCCCC
Q 036317 77 LEGSGDGSVYAWSARSGK--------------EPPVIKWAPGS 105 (106)
Q Consensus 77 ~t~s~d~~i~~wd~~~~~--------------~v~~i~~sp~~ 105 (106)
++|+.|+.|++||+.+++ .|.+++|+|+-
T Consensus 314 ~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg 356 (380)
T 3iz6_a 314 FAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDG 356 (380)
T ss_dssp EEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSS
T ss_pred EEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCC
Confidence 999999999999987664 78999999963
No 22
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.62 E-value=6.4e-15 Score=102.76 Aligned_cols=87 Identities=15% Similarity=0.274 Sum_probs=76.8
Q ss_pred ecCCCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce----eccCCCcEEEEEecCCcceeeeeeecccEEEEecCC
Q 036317 7 SDGGDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGD 82 (106)
Q Consensus 7 ~~~~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d 82 (106)
.+.+|...|.+++|+|||+++++++.|++|++||+.+++. ..+...+..+.|+|++ +++++|+.|
T Consensus 60 ~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~-----------~~l~s~s~D 128 (319)
T 3frx_A 60 SFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKA-----------SMIISGSRD 128 (319)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTS-----------CEEEEEETT
T ss_pred EEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCC-----------CEEEEEeCC
Confidence 3457788999999999999999999999999999999876 4577788899999999 999999999
Q ss_pred CcEEEEECCCCC---------CCcEEEeCCC
Q 036317 83 GSVYAWSARSGK---------EPPVIKWAPG 104 (106)
Q Consensus 83 ~~i~~wd~~~~~---------~v~~i~~sp~ 104 (106)
++|++||++... .+.+++|+|.
T Consensus 129 ~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~ 159 (319)
T 3frx_A 129 KTIKVWTIKGQCLATLLGHNDWVSQVRVVPN 159 (319)
T ss_dssp SCEEEEETTSCEEEEECCCSSCEEEEEECCC
T ss_pred CeEEEEECCCCeEEEEeccCCcEEEEEEccC
Confidence 999999997532 6788888874
No 23
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.62 E-value=6.9e-15 Score=103.24 Aligned_cols=87 Identities=14% Similarity=0.249 Sum_probs=76.4
Q ss_pred ecCCCCCCeeEEEE-----CC-CCCeEEEEeCCCeEEEEEcCCCc-------e----eccCCCcEEEEEecCCcceeeee
Q 036317 7 SDGGDVSDANEVKL-----SN-DGRLMLLTTLEGHIHVLHSFQGT-------L----PVSHNSTLEASFSQHLSLVALSV 69 (106)
Q Consensus 7 ~~~~~~~~v~~v~~-----sp-dg~~l~~~~~~~~i~l~d~~~~~-------~----~~~~~~~~~~~fs~d~~~~~~~~ 69 (106)
.+.+|.+.|++++| ++ |++++++++.|++|++||..+.+ . ..+...+..++|+|++
T Consensus 16 ~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~------- 88 (343)
T 2xzm_R 16 ILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQEN------- 88 (343)
T ss_dssp EEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSST-------
T ss_pred eeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCC-------
Confidence 45788899999999 77 99999999999999999987543 1 3466778889999999
Q ss_pred eecccEEEEecCCCcEEEEECCCCC----------CCcEEEeCCC
Q 036317 70 LILRSWVLEGSGDGSVYAWSARSGK----------EPPVIKWAPG 104 (106)
Q Consensus 70 ~~~~~~i~t~s~d~~i~~wd~~~~~----------~v~~i~~sp~ 104 (106)
+++++|+.|++|++||+++++ .|.+++|+|+
T Consensus 89 ----~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~ 129 (343)
T 2xzm_R 89 ----CFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPD 129 (343)
T ss_dssp ----TEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSS
T ss_pred ----CEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCC
Confidence 999999999999999999987 7889999986
No 24
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.62 E-value=3.5e-15 Score=105.93 Aligned_cols=80 Identities=10% Similarity=0.138 Sum_probs=71.2
Q ss_pred CCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce--------eccCCCcEEEEEecCCcceeeeeeecccEEEEecCCCc
Q 036317 13 SDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL--------PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGS 84 (106)
Q Consensus 13 ~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~--------~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~ 84 (106)
..|.+++|+||++ +++++.|++|+|||+.+++. ..|.+.+.+++|+||+ ++|++|+.|++
T Consensus 83 ~~v~~~~~s~d~~-l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg-----------~~l~sgs~d~~ 150 (344)
T 4gqb_B 83 AGVADLTWVGERG-ILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSG-----------TQAVSGSKDIC 150 (344)
T ss_dssp SCEEEEEEETTTE-EEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTS-----------SEEEEEETTSC
T ss_pred CCEEEEEEeCCCe-EEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCC-----------CEEEEEeCCCe
Confidence 4699999999964 88999999999999998865 2466788899999999 99999999999
Q ss_pred EEEEECCCCC----------CCcEEEeCCC
Q 036317 85 VYAWSARSGK----------EPPVIKWAPG 104 (106)
Q Consensus 85 i~~wd~~~~~----------~v~~i~~sp~ 104 (106)
|++||+++++ .|.+++|+|.
T Consensus 151 i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~ 180 (344)
T 4gqb_B 151 IKVWDLAQQVVLSSYRAHAAQVTCVAASPH 180 (344)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEECSS
T ss_pred EEEEECCCCcEEEEEcCcCCceEEEEecCC
Confidence 9999999987 7889999886
No 25
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.61 E-value=1.6e-14 Score=108.75 Aligned_cols=98 Identities=17% Similarity=0.180 Sum_probs=80.2
Q ss_pred ecCCCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce------eccCCCcEEEEEecCCcceeeee-----------
Q 036317 7 SDGGDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL------PVSHNSTLEASFSQHLSLVALSV----------- 69 (106)
Q Consensus 7 ~~~~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~------~~~~~~~~~~~fs~d~~~~~~~~----------- 69 (106)
.+.+|...|++++|||||+++++++.|++|+|||..+++. ..+.+.+..++|+||+++||...
T Consensus 54 ~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~ 133 (611)
T 1nr0_A 54 IYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFL 133 (611)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEE
T ss_pred EecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEE
Confidence 3457788999999999999999999999999999875542 44667888999999999887432
Q ss_pred ----------------------eecc-cEEEEecCCCcEEEEECCCCC----------CCcEEEeCCC
Q 036317 70 ----------------------LILR-SWVLEGSGDGSVYAWSARSGK----------EPPVIKWAPG 104 (106)
Q Consensus 70 ----------------------~~~~-~~i~t~s~d~~i~~wd~~~~~----------~v~~i~~sp~ 104 (106)
.+.. ..+++|+.|++|++||.++++ .|.+++|+|+
T Consensus 134 wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspd 201 (611)
T 1nr0_A 134 FDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPD 201 (611)
T ss_dssp TTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTT
T ss_pred eeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCC
Confidence 1111 259999999999999988764 7899999996
No 26
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.61 E-value=8.3e-15 Score=100.06 Aligned_cols=86 Identities=21% Similarity=0.270 Sum_probs=75.4
Q ss_pred cCCCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCc----e----eccCCCcEEEEEec--CCcceeeeeeecccEEE
Q 036317 8 DGGDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGT----L----PVSHNSTLEASFSQ--HLSLVALSVLILRSWVL 77 (106)
Q Consensus 8 ~~~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~----~----~~~~~~~~~~~fs~--d~~~~~~~~~~~~~~i~ 77 (106)
+.+|.+.|++++|+|+|+++++++.|+.|++||..++. . ..+...+..++|+| |+ ++|+
T Consensus 7 ~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~-----------~~l~ 75 (351)
T 3f3f_A 7 DSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYG-----------RIIA 75 (351)
T ss_dssp ECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGC-----------SEEE
T ss_pred CcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCC-----------CEEE
Confidence 46888999999999999999999999999999998763 2 34667788999999 69 9999
Q ss_pred EecCCCcEEEEECCCCC-------------------CCcEEEeCCC
Q 036317 78 EGSGDGSVYAWSARSGK-------------------EPPVIKWAPG 104 (106)
Q Consensus 78 t~s~d~~i~~wd~~~~~-------------------~v~~i~~sp~ 104 (106)
+++.|++|++||+++++ .|.+++|+|.
T Consensus 76 s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 121 (351)
T 3f3f_A 76 SASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPA 121 (351)
T ss_dssp EEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCG
T ss_pred EEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCC
Confidence 99999999999998762 7888999885
No 27
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.61 E-value=7.1e-15 Score=105.87 Aligned_cols=87 Identities=10% Similarity=0.167 Sum_probs=77.0
Q ss_pred ecCCCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce----eccCCCcEEEEEecCCcceeeeeeecccEEEEecCC
Q 036317 7 SDGGDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGD 82 (106)
Q Consensus 7 ~~~~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d 82 (106)
.+.+|.+.|.+++|+|+|+++++++.|++|++||..+++. ..+...+.++.|+|++ +++++|+.|
T Consensus 145 ~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~-----------~~l~s~s~D 213 (410)
T 1vyh_C 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNG-----------DHIVSASRD 213 (410)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSS-----------SEEEEEETT
T ss_pred EEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCC-----------CEEEEEeCC
Confidence 3456778999999999999999999999999999988776 4566778899999999 999999999
Q ss_pred CcEEEEECCCCC----------CCcEEEeCCC
Q 036317 83 GSVYAWSARSGK----------EPPVIKWAPG 104 (106)
Q Consensus 83 ~~i~~wd~~~~~----------~v~~i~~sp~ 104 (106)
++|++||+++++ .+.++.|+|+
T Consensus 214 ~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~ 245 (410)
T 1vyh_C 214 KTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD 245 (410)
T ss_dssp SEEEEEETTTCCEEEEEECCSSCEEEEEECTT
T ss_pred CeEEEEECCCCcEEEEEeCCCccEEEEEECCC
Confidence 999999999987 6778888875
No 28
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.60 E-value=9.5e-15 Score=102.32 Aligned_cols=86 Identities=13% Similarity=0.155 Sum_probs=70.8
Q ss_pred cCCCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCC-Cc---e----eccCCCcEEEEEecCCcceeeeeeecccEEEEe
Q 036317 8 DGGDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQ-GT---L----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEG 79 (106)
Q Consensus 8 ~~~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~-~~---~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~ 79 (106)
+.+|.+.|.+++|+|+|+++++++.|+++++||... ++ . ..+...+..+.|+|++ ++|+++
T Consensus 103 ~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~-----------~~l~s~ 171 (330)
T 2hes_X 103 IEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSE-----------ALLASS 171 (330)
T ss_dssp EC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSS-----------SEEEEE
T ss_pred EcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCC-----------CEEEEE
Confidence 467778999999999999999999999999999843 22 1 3466678899999999 999999
Q ss_pred cCCCcEEEEECCCCC------------CCcEEEeCCC
Q 036317 80 SGDGSVYAWSARSGK------------EPPVIKWAPG 104 (106)
Q Consensus 80 s~d~~i~~wd~~~~~------------~v~~i~~sp~ 104 (106)
+.|++|++||+.++. .|.+++|+|+
T Consensus 172 s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 208 (330)
T 2hes_X 172 SYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKT 208 (330)
T ss_dssp ETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCS
T ss_pred cCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCC
Confidence 999999999987652 7889999986
No 29
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.60 E-value=1.7e-14 Score=99.75 Aligned_cols=85 Identities=18% Similarity=0.320 Sum_probs=75.2
Q ss_pred CCCCCCeeEEEECCC---CCeEEEEeCCCeEEEEEcCC-Cce-----eccCCCcEEEEEecCCcceeeeeeecccEEEEe
Q 036317 9 GGDVSDANEVKLSND---GRLMLLTTLEGHIHVLHSFQ-GTL-----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEG 79 (106)
Q Consensus 9 ~~~~~~v~~v~~spd---g~~l~~~~~~~~i~l~d~~~-~~~-----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~ 79 (106)
.+|.+.|++++|+|+ |+++++++.|+.+++||..+ +.. ..+...+..++|+|++ ++|+++
T Consensus 36 ~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-----------~~l~s~ 104 (368)
T 3mmy_A 36 SSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDG-----------SKVFTA 104 (368)
T ss_dssp SCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTS-----------SEEEEE
T ss_pred cCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCC-----------CEEEEE
Confidence 567789999999999 69999999999999999987 443 4467788899999999 999999
Q ss_pred cCCCcEEEEECCCCC---------CCcEEEe--CCC
Q 036317 80 SGDGSVYAWSARSGK---------EPPVIKW--APG 104 (106)
Q Consensus 80 s~d~~i~~wd~~~~~---------~v~~i~~--sp~ 104 (106)
+.|+.|++||+++++ .|.+++| +|+
T Consensus 105 ~~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~ 140 (368)
T 3mmy_A 105 SCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPN 140 (368)
T ss_dssp ETTSEEEEEETTTTEEEEEEECSSCEEEEEEEECSS
T ss_pred cCCCcEEEEEcCCCCceeeccccCceEEEEEEeCCC
Confidence 999999999999887 7899999 665
No 30
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.60 E-value=1e-14 Score=103.43 Aligned_cols=88 Identities=15% Similarity=0.205 Sum_probs=75.8
Q ss_pred ecCCCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce----eccCCCcEEEEEecCCcceeeeeeecccEEEEecCC
Q 036317 7 SDGGDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGD 82 (106)
Q Consensus 7 ~~~~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d 82 (106)
...+|.+.|++++|+|||+++++++.|+.|++||..+++. ..+...+..+.|+|++ +..+++++.|
T Consensus 134 ~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~----------~~~~~s~~~d 203 (357)
T 4g56_B 134 AKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGK----------DTIFLSCGED 203 (357)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTC----------SSCEEEEETT
T ss_pred ccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCC----------CceeeeeccC
Confidence 3446777999999999999999999999999999999887 4466778889999997 1378899999
Q ss_pred CcEEEEECCCCC------------CCcEEEeCCC
Q 036317 83 GSVYAWSARSGK------------EPPVIKWAPG 104 (106)
Q Consensus 83 ~~i~~wd~~~~~------------~v~~i~~sp~ 104 (106)
++|++||+++++ .+.+++|+|+
T Consensus 204 g~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~ 237 (357)
T 4g56_B 204 GRILLWDTRKPKPATRIDFCASDTIPTSVTWHPE 237 (357)
T ss_dssp SCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTT
T ss_pred CceEEEECCCCceeeeeeeccccccccchhhhhc
Confidence 999999999876 5788999986
No 31
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.60 E-value=1.7e-14 Score=101.01 Aligned_cols=84 Identities=15% Similarity=0.296 Sum_probs=67.9
Q ss_pred CCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCC-------ce----eccCCCcEEEEEecCCcceeeeeeecccEEEEe
Q 036317 11 DVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQG-------TL----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEG 79 (106)
Q Consensus 11 ~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~-------~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~ 79 (106)
|.+.|.+++|+|+|+++++++.|++|++||.... +. ..+...+..++|+|++ ++|++|
T Consensus 57 h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g-----------~~las~ 125 (330)
T 2hes_X 57 HKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDG-----------YYLATC 125 (330)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTS-----------CEEEEE
T ss_pred ccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCC-----------CEEEEE
Confidence 7779999999999999999999999999998532 22 3466778899999999 999999
Q ss_pred cCCCcEEEEECCC-CC-------------CCcEEEeCCCC
Q 036317 80 SGDGSVYAWSARS-GK-------------EPPVIKWAPGS 105 (106)
Q Consensus 80 s~d~~i~~wd~~~-~~-------------~v~~i~~sp~~ 105 (106)
+.|++|++||++. ++ .|.+++|+|+.
T Consensus 126 s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~ 165 (330)
T 2hes_X 126 SRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSE 165 (330)
T ss_dssp ETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSS
T ss_pred eCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCC
Confidence 9999999999943 21 68899999863
No 32
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.60 E-value=2.5e-14 Score=101.25 Aligned_cols=86 Identities=14% Similarity=0.144 Sum_probs=74.2
Q ss_pred cCCCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce---ec---cCCCcEEEEEecCCcceeeeeeecccEEEEecC
Q 036317 8 DGGDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL---PV---SHNSTLEASFSQHLSLVALSVLILRSWVLEGSG 81 (106)
Q Consensus 8 ~~~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~---~~---~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~ 81 (106)
+.+|...|++++|+|+|+++++++.|+++++||+.+++. .. ....+..+.|+|++ +++++|+.
T Consensus 236 ~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g-----------~~l~~g~~ 304 (354)
T 2pbi_B 236 FETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSG-----------RLLFAGYN 304 (354)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTS-----------SEEEEEET
T ss_pred ecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCC-----------CEEEEEEC
Confidence 456677999999999999999999999999999988765 11 12245679999999 99999999
Q ss_pred CCcEEEEECCCCC----------CCcEEEeCCC
Q 036317 82 DGSVYAWSARSGK----------EPPVIKWAPG 104 (106)
Q Consensus 82 d~~i~~wd~~~~~----------~v~~i~~sp~ 104 (106)
|++|++||+.+++ .|.+++|+|+
T Consensus 305 d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spd 337 (354)
T 2pbi_B 305 DYTINVWDVLKGSRVSILFGHENRVSTLRVSPD 337 (354)
T ss_dssp TSCEEEEETTTCSEEEEECCCSSCEEEEEECTT
T ss_pred CCcEEEEECCCCceEEEEECCCCcEEEEEECCC
Confidence 9999999998876 8899999996
No 33
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.59 E-value=6.7e-15 Score=104.83 Aligned_cols=76 Identities=12% Similarity=0.163 Sum_probs=68.6
Q ss_pred eecCCCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce----eccCCCcEEEEEecCCcceeeeeeecccEEEEecC
Q 036317 6 FSDGGDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSG 81 (106)
Q Consensus 6 ~~~~~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~ 81 (106)
..+.+|.+.|++++|+|+|+++++++.|+++++||..+++. ..+...+..++|+|++ ++|++|+.
T Consensus 60 ~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g-----------~~las~~~ 128 (380)
T 3iz6_a 60 RTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNG-----------QSVACGGL 128 (380)
T ss_dssp EEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTS-----------SEEEECCS
T ss_pred ecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCC-----------CEEEEeeC
Confidence 44678899999999999999999999999999999998876 4466677889999999 99999999
Q ss_pred CCcEEEEECCC
Q 036317 82 DGSVYAWSARS 92 (106)
Q Consensus 82 d~~i~~wd~~~ 92 (106)
|+.|++||+.+
T Consensus 129 d~~v~iw~~~~ 139 (380)
T 3iz6_a 129 DSACSIFNLSS 139 (380)
T ss_dssp SSCCEEEECCC
T ss_pred CCcEEEEECCC
Confidence 99999999875
No 34
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.59 E-value=1.7e-14 Score=102.12 Aligned_cols=78 Identities=13% Similarity=0.144 Sum_probs=69.5
Q ss_pred eecCCCCCCeeEEEECCCCCeEEEEeCCCe-EEEEEcCCCce----e-c-cCCCcEEEEEecCCcceeeeeeecccEEEE
Q 036317 6 FSDGGDVSDANEVKLSNDGRLMLLTTLEGH-IHVLHSFQGTL----P-V-SHNSTLEASFSQHLSLVALSVLILRSWVLE 78 (106)
Q Consensus 6 ~~~~~~~~~v~~v~~spdg~~l~~~~~~~~-i~l~d~~~~~~----~-~-~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t 78 (106)
..+.+|.+.|++++|+|||+++++++.|++ +++||..+++. . + +...+..++|+||+ +++++
T Consensus 189 ~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~-----------~~l~s 257 (355)
T 3vu4_A 189 VLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDG-----------SKLAV 257 (355)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTS-----------CEEEE
T ss_pred EEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCC-----------CEEEE
Confidence 445678889999999999999999999998 99999999876 3 3 66678899999999 99999
Q ss_pred ecCCCcEEEEECCCCC
Q 036317 79 GSGDGSVYAWSARSGK 94 (106)
Q Consensus 79 ~s~d~~i~~wd~~~~~ 94 (106)
++.|++|++||++.+.
T Consensus 258 ~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 258 VSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp EETTCEEEEEESSCCS
T ss_pred EECCCEEEEEEccCCC
Confidence 9999999999998653
No 35
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.59 E-value=1.1e-14 Score=105.26 Aligned_cols=84 Identities=8% Similarity=-0.070 Sum_probs=71.4
Q ss_pred CCCCCeeEEEECC-CCCeEEEEeCCCeEEEEEcCCCce------eccCCCcEEEEEec-CCcceeeeeeecccEEEEecC
Q 036317 10 GDVSDANEVKLSN-DGRLMLLTTLEGHIHVLHSFQGTL------PVSHNSTLEASFSQ-HLSLVALSVLILRSWVLEGSG 81 (106)
Q Consensus 10 ~~~~~v~~v~~sp-dg~~l~~~~~~~~i~l~d~~~~~~------~~~~~~~~~~~fs~-d~~~~~~~~~~~~~~i~t~s~ 81 (106)
.+...|++++|+| ++++|++++.||+|+|||..+++. ..|.+.+.++.|+| ++ .+|++++.
T Consensus 117 ~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~-----------~~l~s~s~ 185 (435)
T 4e54_B 117 PFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNT-----------NQFYASSM 185 (435)
T ss_dssp ECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCT-----------TEEEEECS
T ss_pred CCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCC-----------CEEEEEeC
Confidence 3456899999999 567899999999999999987754 34677889999998 68 89999999
Q ss_pred CCcEEEEECCCCC------------CCcEEEeCCC
Q 036317 82 DGSVYAWSARSGK------------EPPVIKWAPG 104 (106)
Q Consensus 82 d~~i~~wd~~~~~------------~v~~i~~sp~ 104 (106)
|++|++||++++. .+.+++|+|+
T Consensus 186 D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (435)
T 4e54_B 186 EGTTRLQDFKGNILRVFASSDTINIWFCSLDVSAS 220 (435)
T ss_dssp SSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETT
T ss_pred CCEEEEeeccCCceeEEeccCCCCccEEEEEECCC
Confidence 9999999998764 5678888886
No 36
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.58 E-value=1.8e-14 Score=102.24 Aligned_cols=85 Identities=13% Similarity=0.129 Sum_probs=72.0
Q ss_pred CCCCCeeEEEECCCC-CeEEEEeCCCeEEEEEcCCCce----eccCCCcEEEEEecCCcceeeeeeecccEEEEecCCCc
Q 036317 10 GDVSDANEVKLSNDG-RLMLLTTLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGS 84 (106)
Q Consensus 10 ~~~~~v~~v~~spdg-~~l~~~~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~ 84 (106)
.+...+.+++|+|++ +++++++.|+.|++||+.+++. ..+...+..++|+|++ +++|++|+.|++
T Consensus 224 ~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~----------~~~lasgs~D~~ 293 (357)
T 4g56_B 224 ASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHS----------SPFLASISEDCT 293 (357)
T ss_dssp TCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSS----------SCCEEEEETTSC
T ss_pred cccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCC----------CCEEEEEeCCCE
Confidence 344579999999985 5677889999999999998876 4466778899999987 247899999999
Q ss_pred EEEEECCCCC---------CCcEEEeCCC
Q 036317 85 VYAWSARSGK---------EPPVIKWAPG 104 (106)
Q Consensus 85 i~~wd~~~~~---------~v~~i~~sp~ 104 (106)
|++||+++++ .|.+++|+|.
T Consensus 294 i~iwd~~~~~~~~~~~H~~~V~~vafsP~ 322 (357)
T 4g56_B 294 VAVLDADFSEVFRDLSHRDFVTGVAWSPL 322 (357)
T ss_dssp EEEECTTSCEEEEECCCSSCEEEEEECSS
T ss_pred EEEEECCCCcEeEECCCCCCEEEEEEeCC
Confidence 9999999987 8899999983
No 37
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.58 E-value=2.9e-14 Score=99.90 Aligned_cols=84 Identities=12% Similarity=0.056 Sum_probs=71.8
Q ss_pred CCCCCeeEEEECC--CCCeEEEEeCCCeEEEEEcCCCce----ec-cCCCcEEEEEecCCcceeeeeeecccEEEEecCC
Q 036317 10 GDVSDANEVKLSN--DGRLMLLTTLEGHIHVLHSFQGTL----PV-SHNSTLEASFSQHLSLVALSVLILRSWVLEGSGD 82 (106)
Q Consensus 10 ~~~~~v~~v~~sp--dg~~l~~~~~~~~i~l~d~~~~~~----~~-~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d 82 (106)
++.++|.+++|+| +++++++++.|+++++||..+++. .. +...+..++|+|++ +++++|+.|
T Consensus 123 ~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg-----------~~lasg~~d 191 (343)
T 3lrv_A 123 DSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDS-----------LLLALYSPD 191 (343)
T ss_dssp CCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTS-----------CEEEEECTT
T ss_pred CCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCC-----------CEEEEEcCC
Confidence 3446899999999 999999999999999999998877 12 33357789999999 999999999
Q ss_pred CcEEEEECCCCC------------CCcEEEeCCC
Q 036317 83 GSVYAWSARSGK------------EPPVIKWAPG 104 (106)
Q Consensus 83 ~~i~~wd~~~~~------------~v~~i~~sp~ 104 (106)
+.|++||+++++ .|.+++|+|+
T Consensus 192 g~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~ 225 (343)
T 3lrv_A 192 GILDVYNLSSPDQASSRFPVDEEAKIKEVKFADN 225 (343)
T ss_dssp SCEEEEESSCTTSCCEECCCCTTSCEEEEEECTT
T ss_pred CEEEEEECCCCCCCccEEeccCCCCEEEEEEeCC
Confidence 999999999876 6788899886
No 38
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.58 E-value=8.4e-15 Score=104.29 Aligned_cols=85 Identities=9% Similarity=0.097 Sum_probs=72.8
Q ss_pred CCCCCeeEEEECCCCCeEEEEeCCC----eEEEEEcCCCce--------eccCCCcEEEEEecCCcceeeeeeecccEEE
Q 036317 10 GDVSDANEVKLSNDGRLMLLTTLEG----HIHVLHSFQGTL--------PVSHNSTLEASFSQHLSLVALSVLILRSWVL 77 (106)
Q Consensus 10 ~~~~~v~~v~~spdg~~l~~~~~~~----~i~l~d~~~~~~--------~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~ 77 (106)
++...|++++|+|||+++++++.++ .+.+||...... ..+...+.+++|+||| ++|+
T Consensus 217 ~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg-----------~~la 285 (365)
T 4h5i_A 217 DKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKG-----------ELAV 285 (365)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTS-----------CEEE
T ss_pred CCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCC-----------CceE
Confidence 4455899999999999999998776 688898876653 3456678899999999 9999
Q ss_pred EecCCCcEEEEECCCCC-----------CCcEEEeCCCC
Q 036317 78 EGSGDGSVYAWSARSGK-----------EPPVIKWAPGS 105 (106)
Q Consensus 78 t~s~d~~i~~wd~~~~~-----------~v~~i~~sp~~ 105 (106)
+|+.|++|+|||+++++ .|.+++|+|+.
T Consensus 286 sgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg 324 (365)
T 4h5i_A 286 LASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDS 324 (365)
T ss_dssp EEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTS
T ss_pred EEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCC
Confidence 99999999999999987 78999999974
No 39
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.58 E-value=3.3e-14 Score=97.93 Aligned_cols=77 Identities=14% Similarity=0.202 Sum_probs=68.1
Q ss_pred ecCCCCCCeeEEEECCC-CCeEEEEeCCCeEEEEEcCCCce---------eccCCCcEEEEEecCCcceeeeeeecccEE
Q 036317 7 SDGGDVSDANEVKLSND-GRLMLLTTLEGHIHVLHSFQGTL---------PVSHNSTLEASFSQHLSLVALSVLILRSWV 76 (106)
Q Consensus 7 ~~~~~~~~v~~v~~spd-g~~l~~~~~~~~i~l~d~~~~~~---------~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i 76 (106)
++.+|.+.|++|+|+|+ ++++++++.|++|+|||+.+++. ..+...+..+.|+|++ +++
T Consensus 33 tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg-----------~~l 101 (340)
T 4aow_A 33 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDG-----------QFA 101 (340)
T ss_dssp EECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTS-----------SEE
T ss_pred EECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCC-----------CEE
Confidence 46789999999999998 68999999999999999876543 3456778899999999 999
Q ss_pred EEecCCCcEEEEECCCCC
Q 036317 77 LEGSGDGSVYAWSARSGK 94 (106)
Q Consensus 77 ~t~s~d~~i~~wd~~~~~ 94 (106)
++++.|+.|++|+...+.
T Consensus 102 ~s~~~d~~i~~~~~~~~~ 119 (340)
T 4aow_A 102 LSGSWDGTLRLWDLTTGT 119 (340)
T ss_dssp EEEETTSEEEEEETTTTE
T ss_pred EEEcccccceEEeecccc
Confidence 999999999999999876
No 40
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.57 E-value=2.7e-14 Score=102.05 Aligned_cols=79 Identities=18% Similarity=0.291 Sum_probs=71.8
Q ss_pred CeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce----eccCCCcEEEEEecCCcceeeeeeecccEEEEecCCCcEEEEE
Q 036317 14 DANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSVYAWS 89 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~~wd 89 (106)
.|++++|+|||+++++++.|+.|++||..+++. ..+...+.++.|+|++ +++++++.|++|++||
T Consensus 125 ~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~-----------~~l~s~s~d~~v~iwd 193 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSG-----------DKLVSGSGDRTVRIWD 193 (393)
T ss_dssp BEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTS-----------SEEEEEETTSEEEEEE
T ss_pred eEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCC-----------CEEEEecCCCcEEEEE
Confidence 489999999999999999999999999998876 4566778899999999 9999999999999999
Q ss_pred CCCCC---------CCcEEEeCC
Q 036317 90 ARSGK---------EPPVIKWAP 103 (106)
Q Consensus 90 ~~~~~---------~v~~i~~sp 103 (106)
+++++ .+.+++|+|
T Consensus 194 ~~~~~~~~~~~~~~~v~~~~~~~ 216 (393)
T 1erj_A 194 LRTGQCSLTLSIEDGVTTVAVSP 216 (393)
T ss_dssp TTTTEEEEEEECSSCEEEEEECS
T ss_pred CCCCeeEEEEEcCCCcEEEEEEC
Confidence 99886 677888887
No 41
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.57 E-value=1.2e-14 Score=101.14 Aligned_cols=86 Identities=15% Similarity=0.273 Sum_probs=75.1
Q ss_pred cCCCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCC--ce----eccCCCcEEEEEecC--CcceeeeeeecccEEEEe
Q 036317 8 DGGDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQG--TL----PVSHNSTLEASFSQH--LSLVALSVLILRSWVLEG 79 (106)
Q Consensus 8 ~~~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~--~~----~~~~~~~~~~~fs~d--~~~~~~~~~~~~~~i~t~ 79 (106)
+.+|.+.|.+++|+|+|+++++++.|+.|++||...+ +. ..+...+..+.|+|+ + ++++++
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-----------~~l~s~ 75 (379)
T 3jrp_A 7 ANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFG-----------TILASC 75 (379)
T ss_dssp EEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGC-----------SEEEEE
T ss_pred ecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCC-----------CEEEEe
Confidence 3577889999999999999999999999999999744 33 346677889999977 9 999999
Q ss_pred cCCCcEEEEECCCCC------------CCcEEEeCCC
Q 036317 80 SGDGSVYAWSARSGK------------EPPVIKWAPG 104 (106)
Q Consensus 80 s~d~~i~~wd~~~~~------------~v~~i~~sp~ 104 (106)
+.|+.|++||+++++ .|.+++|+|.
T Consensus 76 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~ 112 (379)
T 3jrp_A 76 SYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPH 112 (379)
T ss_dssp ETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCG
T ss_pred ccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCC
Confidence 999999999999874 7899999986
No 42
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.57 E-value=2.6e-14 Score=105.25 Aligned_cols=84 Identities=20% Similarity=0.299 Sum_probs=73.4
Q ss_pred cCCCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce----eccCCCcEEEEEecCCcceeeeeeecccEEEEecCCC
Q 036317 8 DGGDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDG 83 (106)
Q Consensus 8 ~~~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~ 83 (106)
+.++...|.+++|+|||+++++++.|+.|++||. +++. ..+...+..++|+||+ ++|++++.|+
T Consensus 463 ~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg-----------~~l~s~~~dg 530 (577)
T 2ymu_A 463 LTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDG-----------QTIASASDDK 530 (577)
T ss_dssp EECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTS-----------SCEEEEETTS
T ss_pred EcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCC-----------CEEEEEECcC
Confidence 3466779999999999999999999999999995 5554 4567788899999999 9999999999
Q ss_pred cEEEEECCCCC----------CCcEEEeCCC
Q 036317 84 SVYAWSARSGK----------EPPVIKWAPG 104 (106)
Q Consensus 84 ~i~~wd~~~~~----------~v~~i~~sp~ 104 (106)
.|++||+ +++ .|.+++|+|+
T Consensus 531 ~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~d 560 (577)
T 2ymu_A 531 TVKLWNR-NGQLLQTLTGHSSSVWGVAFSPD 560 (577)
T ss_dssp EEEEECT-TSCEEEEEECCSSCEEEEEECTT
T ss_pred EEEEEeC-CCCEEEEEcCCCCCEEEEEEcCC
Confidence 9999996 455 8899999986
No 43
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.57 E-value=3.8e-14 Score=106.66 Aligned_cols=86 Identities=12% Similarity=0.205 Sum_probs=75.1
Q ss_pred cCCCCCCeeEEEECCCCC-eEEEEeCCCeEEEEEcCCCce----eccCCCcEEEEEecCCcceeeeeeecccEEEEecCC
Q 036317 8 DGGDVSDANEVKLSNDGR-LMLLTTLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGD 82 (106)
Q Consensus 8 ~~~~~~~v~~v~~spdg~-~l~~~~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d 82 (106)
+.+|...|++++|+|++. .+++++.|+++++||..+++. ..|...+.+++|+||+ +++++++.|
T Consensus 143 l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg-----------~~las~s~D 211 (611)
T 1nr0_A 143 LTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDG-----------SLFASTGGD 211 (611)
T ss_dssp CCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTS-----------SEEEEEETT
T ss_pred ecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCC-----------CEEEEEECC
Confidence 456778999999999997 489999999999999888765 4567788899999999 999999999
Q ss_pred CcEEEEECCCCC-----------------CCcEEEeCCC
Q 036317 83 GSVYAWSARSGK-----------------EPPVIKWAPG 104 (106)
Q Consensus 83 ~~i~~wd~~~~~-----------------~v~~i~~sp~ 104 (106)
++|++||+++++ .|.+++|+|+
T Consensus 212 ~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spd 250 (611)
T 1nr0_A 212 GTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPD 250 (611)
T ss_dssp SCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTT
T ss_pred CcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCC
Confidence 999999987653 5778999986
No 44
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.56 E-value=2.3e-14 Score=109.26 Aligned_cols=87 Identities=14% Similarity=0.216 Sum_probs=78.5
Q ss_pred cCCCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce----eccCCCcEEEEEecCCcceeeeeeecccEEEEecCCC
Q 036317 8 DGGDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDG 83 (106)
Q Consensus 8 ~~~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~ 83 (106)
+.+|.+.|.+++|+|||+++++++.++.|++||..+++. ..+.+.+..+.|+|++ ++|++++.|+
T Consensus 9 ~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~-----------~~l~~~~~dg 77 (814)
T 3mkq_A 9 FSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARK-----------NWIIVGSDDF 77 (814)
T ss_dssp EEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGG-----------TEEEEEETTS
T ss_pred eecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCC-----------CEEEEEeCCC
Confidence 456778999999999999999999999999999998876 4467788899999999 9999999999
Q ss_pred cEEEEECCCCC----------CCcEEEeCCCC
Q 036317 84 SVYAWSARSGK----------EPPVIKWAPGS 105 (106)
Q Consensus 84 ~i~~wd~~~~~----------~v~~i~~sp~~ 105 (106)
.|++||+++++ .|.+++|+|+.
T Consensus 78 ~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~ 109 (814)
T 3mkq_A 78 RIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTK 109 (814)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEECSSS
T ss_pred eEEEEECCCCcEEEEEecCCCCEEEEEEeCCC
Confidence 99999999987 78899999863
No 45
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.56 E-value=4.9e-14 Score=112.05 Aligned_cols=88 Identities=17% Similarity=0.259 Sum_probs=79.6
Q ss_pred eecCCCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce----eccCCCcEEEEEecCCcceeeeeeecccEEEEecC
Q 036317 6 FSDGGDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSG 81 (106)
Q Consensus 6 ~~~~~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~ 81 (106)
..+.+|.+.|.+++|+|||+++++++.|++|++||..+++. ..+...+.+++|+|++ +++++++.
T Consensus 609 ~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~-----------~~l~s~~~ 677 (1249)
T 3sfz_A 609 LVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDD-----------SYIATCSA 677 (1249)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTS-----------SEEEEEET
T ss_pred EEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCC-----------CEEEEEeC
Confidence 44567888999999999999999999999999999999876 4567788899999999 99999999
Q ss_pred CCcEEEEECCCCC----------CCcEEEeCCC
Q 036317 82 DGSVYAWSARSGK----------EPPVIKWAPG 104 (106)
Q Consensus 82 d~~i~~wd~~~~~----------~v~~i~~sp~ 104 (106)
|++|++||+++++ .|.+++|+|.
T Consensus 678 d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~ 710 (1249)
T 3sfz_A 678 DKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNK 710 (1249)
T ss_dssp TSEEEEEETTTCCEEEEEECCSSCEEEEEECSS
T ss_pred CCeEEEEECCCCceEEEEcCCCCcEEEEEEecC
Confidence 9999999999987 7889999884
No 46
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.56 E-value=9.8e-14 Score=99.16 Aligned_cols=87 Identities=13% Similarity=0.169 Sum_probs=75.6
Q ss_pred ecCCCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce---eccCCCcEEEEEec-CCcceeeeeeecccEEEEecCC
Q 036317 7 SDGGDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL---PVSHNSTLEASFSQ-HLSLVALSVLILRSWVLEGSGD 82 (106)
Q Consensus 7 ~~~~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~---~~~~~~~~~~~fs~-d~~~~~~~~~~~~~~i~t~s~d 82 (106)
.+.+|...|.+++|+|+|+++++++.|+++++||+.+++. ......+..+.|+| ++ +++++|+.|
T Consensus 160 ~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~-----------~~l~~~s~d 228 (393)
T 1erj_A 160 ILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDG-----------KYIAAGSLD 228 (393)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTC-----------CEEEEEETT
T ss_pred EEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEEECCCC-----------CEEEEEcCC
Confidence 3457778999999999999999999999999999999876 33455677899999 89 999999999
Q ss_pred CcEEEEECCCCC-----------------CCcEEEeCCC
Q 036317 83 GSVYAWSARSGK-----------------EPPVIKWAPG 104 (106)
Q Consensus 83 ~~i~~wd~~~~~-----------------~v~~i~~sp~ 104 (106)
++|++||+++++ .|.+++|+|+
T Consensus 229 ~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~ 267 (393)
T 1erj_A 229 RAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRD 267 (393)
T ss_dssp SCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTT
T ss_pred CcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCC
Confidence 999999998764 5778899886
No 47
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.56 E-value=3e-14 Score=108.22 Aligned_cols=86 Identities=19% Similarity=0.300 Sum_probs=76.3
Q ss_pred cCCCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce----eccCCCcEEEEEecCCcceeeeeeecccEEEEecCCC
Q 036317 8 DGGDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDG 83 (106)
Q Consensus 8 ~~~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~ 83 (106)
+.+|...|.+++|+|+|+++++++.|++|++||+.+++. ..|...+.+++|+|++ ++|++++.|+
T Consensus 426 ~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~-----------~~l~s~s~D~ 494 (694)
T 3dm0_A 426 LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDN-----------RQIVSASRDR 494 (694)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTS-----------SCEEEEETTS
T ss_pred ecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCC-----------CEEEEEeCCC
Confidence 456778999999999999999999999999999998876 4577788899999999 9999999999
Q ss_pred cEEEEECCCCC-------------CCcEEEeCCC
Q 036317 84 SVYAWSARSGK-------------EPPVIKWAPG 104 (106)
Q Consensus 84 ~i~~wd~~~~~-------------~v~~i~~sp~ 104 (106)
+|++||+.... .|.+++|+|+
T Consensus 495 ~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 528 (694)
T 3dm0_A 495 TIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPN 528 (694)
T ss_dssp CEEEECTTSCEEEEECSSTTSCSSCEEEEEECSC
T ss_pred EEEEEECCCCcceeeccCCCCCCCcEEEEEEeCC
Confidence 99999985432 5899999986
No 48
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.55 E-value=5.2e-14 Score=101.65 Aligned_cols=88 Identities=13% Similarity=0.119 Sum_probs=73.3
Q ss_pred eecCCCCCCeeEEEECC-CCCeEEEEeCCCeEEEEEcCCCce---e---ccCCCcEEEEEecCCcceeeeeeecccEEEE
Q 036317 6 FSDGGDVSDANEVKLSN-DGRLMLLTTLEGHIHVLHSFQGTL---P---VSHNSTLEASFSQHLSLVALSVLILRSWVLE 78 (106)
Q Consensus 6 ~~~~~~~~~v~~v~~sp-dg~~l~~~~~~~~i~l~d~~~~~~---~---~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t 78 (106)
.+..+|.+.|++++|+| +++++++++.|++|++||+.++.. . .....+..+.|+|++ ++|++
T Consensus 158 ~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~l~~ 226 (435)
T 4e54_B 158 IKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASS-----------RMVVT 226 (435)
T ss_dssp ECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTT-----------TEEEE
T ss_pred EEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCC-----------CEEEE
Confidence 34457788999999998 789999999999999999987765 1 122345678999999 99999
Q ss_pred ecCCCcEEEEECCCCC---------CCcEEEeCCC
Q 036317 79 GSGDGSVYAWSARSGK---------EPPVIKWAPG 104 (106)
Q Consensus 79 ~s~d~~i~~wd~~~~~---------~v~~i~~sp~ 104 (106)
|+.||.|++||++... .|.+++|+|.
T Consensus 227 g~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~ 261 (435)
T 4e54_B 227 GDNVGNVILLNMDGKELWNLRMHKKKVTHVALNPC 261 (435)
T ss_dssp ECSSSBEEEEESSSCBCCCSBCCSSCEEEEEECTT
T ss_pred EeCCCcEeeeccCcceeEEEecccceEEeeeecCC
Confidence 9999999999997543 7899999986
No 49
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.55 E-value=9.6e-14 Score=95.78 Aligned_cols=87 Identities=18% Similarity=0.290 Sum_probs=74.1
Q ss_pred ecCCCCCCeeEEEECCC--CCeEEEEeCCCeEEEEEcCCCce------eccCCCcEEEEEecC--CcceeeeeeecccEE
Q 036317 7 SDGGDVSDANEVKLSND--GRLMLLTTLEGHIHVLHSFQGTL------PVSHNSTLEASFSQH--LSLVALSVLILRSWV 76 (106)
Q Consensus 7 ~~~~~~~~v~~v~~spd--g~~l~~~~~~~~i~l~d~~~~~~------~~~~~~~~~~~fs~d--~~~~~~~~~~~~~~i 76 (106)
.+.+|.++|.+++|+|+ |+++++++.|++|++||..+++. ..+...+..++|+|+ + .++
T Consensus 48 ~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g-----------~~l 116 (297)
T 2pm7_B 48 TLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYG-----------PML 116 (297)
T ss_dssp EECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGC-----------SEE
T ss_pred EEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCC-----------cEE
Confidence 44677889999999864 89999999999999999988753 335667888999998 8 899
Q ss_pred EEecCCCcEEEEECCCCC------------CCcEEEeCCC
Q 036317 77 LEGSGDGSVYAWSARSGK------------EPPVIKWAPG 104 (106)
Q Consensus 77 ~t~s~d~~i~~wd~~~~~------------~v~~i~~sp~ 104 (106)
++++.|++|++||++++. .|.+++|+|.
T Consensus 117 ~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~ 156 (297)
T 2pm7_B 117 LVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPA 156 (297)
T ss_dssp EEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCC
T ss_pred EEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCC
Confidence 999999999999998753 5788999985
No 50
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.54 E-value=8.7e-14 Score=98.72 Aligned_cols=75 Identities=16% Similarity=0.278 Sum_probs=68.6
Q ss_pred CCCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce----eccCCCcEEEEEecCCcceeeeeeecccEEEEecCCCc
Q 036317 9 GGDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGS 84 (106)
Q Consensus 9 ~~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~ 84 (106)
.+|.+.|.+++|+|+++++++++.|+.+++||+.+++. ..+...+..++|+|++ +++++++.|++
T Consensus 136 ~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-----------~~l~s~~~d~~ 204 (420)
T 3vl1_A 136 QAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRG-----------RNVLSASLDGT 204 (420)
T ss_dssp TSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTT-----------TEEEEEETTSC
T ss_pred ccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCC-----------CEEEEEcCCCc
Confidence 46778999999999999999999999999999998876 4567788899999999 99999999999
Q ss_pred EEEEECCCCC
Q 036317 85 VYAWSARSGK 94 (106)
Q Consensus 85 i~~wd~~~~~ 94 (106)
|++||+++++
T Consensus 205 v~iwd~~~~~ 214 (420)
T 3vl1_A 205 IRLWECGTGT 214 (420)
T ss_dssp EEEEETTTTE
T ss_pred EEEeECCCCc
Confidence 9999999886
No 51
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.54 E-value=7.5e-14 Score=102.81 Aligned_cols=87 Identities=13% Similarity=0.132 Sum_probs=77.3
Q ss_pred ecCCCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce----ec-cCCCcEEEEEec----------CCcceeeeeee
Q 036317 7 SDGGDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL----PV-SHNSTLEASFSQ----------HLSLVALSVLI 71 (106)
Q Consensus 7 ~~~~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~----~~-~~~~~~~~~fs~----------d~~~~~~~~~~ 71 (106)
.+.++...|.+++|+|+|+++++++.|+.+++||..+++. .. +...+..++|+| ++
T Consensus 483 ~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~--------- 553 (615)
T 1pgu_A 483 LKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEE--------- 553 (615)
T ss_dssp CSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSC---------
T ss_pred ccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCC---------
Confidence 3456677999999999999999999999999999999887 33 666788999999 99
Q ss_pred cccEEEEecCCCcEEEEECCCC-C----------CCcEEEeCCC
Q 036317 72 LRSWVLEGSGDGSVYAWSARSG-K----------EPPVIKWAPG 104 (106)
Q Consensus 72 ~~~~i~t~s~d~~i~~wd~~~~-~----------~v~~i~~sp~ 104 (106)
++|++++.|+.|++||++++ + .|.+++|+|+
T Consensus 554 --~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~ 595 (615)
T 1pgu_A 554 --DLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETP 595 (615)
T ss_dssp --CEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEET
T ss_pred --CEEEEEcCCCcEEEEECCCCceechhhhcCccceEEEEEcCC
Confidence 99999999999999999987 3 7889999986
No 52
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.54 E-value=1.5e-13 Score=97.85 Aligned_cols=87 Identities=9% Similarity=0.176 Sum_probs=74.1
Q ss_pred cCCCCCCeeEEEECC-CCCeEEEEeCCCeEEEEEcCCCc-------e----eccCCCcEEEEEecCCcceeeeeeecccE
Q 036317 8 DGGDVSDANEVKLSN-DGRLMLLTTLEGHIHVLHSFQGT-------L----PVSHNSTLEASFSQHLSLVALSVLILRSW 75 (106)
Q Consensus 8 ~~~~~~~v~~v~~sp-dg~~l~~~~~~~~i~l~d~~~~~-------~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~ 75 (106)
+.+|.+.|.+++|+| +++++++++.|+.|++||..++. . ..+...+..+.|+|++ +.+
T Consensus 77 ~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~----------~~~ 146 (402)
T 2aq5_A 77 VCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTA----------QNV 146 (402)
T ss_dssp BCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSB----------TTE
T ss_pred EecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCC----------CCE
Confidence 346778999999999 99999999999999999998873 2 4466778899999997 148
Q ss_pred EEEecCCCcEEEEECCCCC------------CCcEEEeCCC
Q 036317 76 VLEGSGDGSVYAWSARSGK------------EPPVIKWAPG 104 (106)
Q Consensus 76 i~t~s~d~~i~~wd~~~~~------------~v~~i~~sp~ 104 (106)
+++++.|++|++||+++++ .|.+++|+|+
T Consensus 147 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~ 187 (402)
T 2aq5_A 147 LLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRD 187 (402)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTT
T ss_pred EEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCC
Confidence 9999999999999998875 5788899885
No 53
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.53 E-value=6.1e-14 Score=97.63 Aligned_cols=83 Identities=11% Similarity=0.266 Sum_probs=74.2
Q ss_pred CCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCc--e----eccCCCcEEEEEecCCcceeeeeeecccEEEEecCCCc
Q 036317 11 DVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGT--L----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGS 84 (106)
Q Consensus 11 ~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~--~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~ 84 (106)
+.++|.+++|+|+|+++++++.++.+++||..+++ . ..+...+..+.|+|++ +++++++.|+.
T Consensus 7 ~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-----------~~l~~~~~dg~ 75 (372)
T 1k8k_C 7 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDS-----------NRIVTCGTDRN 75 (372)
T ss_dssp CSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTT-----------TEEEEEETTSC
T ss_pred cCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCC-----------CEEEEEcCCCe
Confidence 56799999999999999999999999999999885 3 4466778899999999 99999999999
Q ss_pred EEEEECCCCC------------CCcEEEeCCC
Q 036317 85 VYAWSARSGK------------EPPVIKWAPG 104 (106)
Q Consensus 85 i~~wd~~~~~------------~v~~i~~sp~ 104 (106)
|++||+++++ .+.+++|+|+
T Consensus 76 i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~ 107 (372)
T 1k8k_C 76 AYVWTLKGRTWKPTLVILRINRAARCVRWAPN 107 (372)
T ss_dssp EEEEEEETTEEEEEEECCCCSSCEEEEEECTT
T ss_pred EEEEECCCCeeeeeEEeecCCCceeEEEECCC
Confidence 9999998774 7889999886
No 54
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.53 E-value=1.4e-13 Score=95.20 Aligned_cols=83 Identities=14% Similarity=0.148 Sum_probs=73.7
Q ss_pred CCCCeeEEEECCC----CCeEEEEeCCCeEEEEEcCCCce----eccCCCcEEEEEec-CCcceeeeeeecccEEEEecC
Q 036317 11 DVSDANEVKLSND----GRLMLLTTLEGHIHVLHSFQGTL----PVSHNSTLEASFSQ-HLSLVALSVLILRSWVLEGSG 81 (106)
Q Consensus 11 ~~~~v~~v~~spd----g~~l~~~~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~-d~~~~~~~~~~~~~~i~t~s~ 81 (106)
+...|.+++|+|+ |+++++++.|+.|++||..+++. ..+...+..+.|+| ++ +++++++.
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-----------~~l~s~~~ 136 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDP-----------NLLLSVSK 136 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCT-----------TEEEEEET
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCC-----------CEEEEEeC
Confidence 4568999999999 67899999999999999998876 44667788999999 89 99999999
Q ss_pred CCcEEEEECCCCC-------------CCcEEEeCCC
Q 036317 82 DGSVYAWSARSGK-------------EPPVIKWAPG 104 (106)
Q Consensus 82 d~~i~~wd~~~~~-------------~v~~i~~sp~ 104 (106)
|+.|++||+++++ .|.+++|+|+
T Consensus 137 dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 172 (366)
T 3k26_A 137 DHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLL 172 (366)
T ss_dssp TSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTT
T ss_pred CCeEEEEEeecCeEEEEecccccccCceeEEEECCC
Confidence 9999999999775 7788999886
No 55
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.53 E-value=2.7e-13 Score=92.91 Aligned_cols=84 Identities=13% Similarity=0.156 Sum_probs=73.4
Q ss_pred CCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce------eccCCCcEEEEEecCCcceeeeeeecccEEEEecCCC
Q 036317 10 GDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL------PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDG 83 (106)
Q Consensus 10 ~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~------~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~ 83 (106)
++...|.+++|+|+++++++++.++.+++||..+++. ..+...+..+.|+|++ +++++++.|+
T Consensus 95 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~-----------~~l~~~~~dg 163 (337)
T 1gxr_A 95 NRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDS-----------KVCFSCCSDG 163 (337)
T ss_dssp CTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTS-----------SEEEEEETTS
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCC-----------CEEEEEeCCC
Confidence 5667899999999999999999999999999988763 3355667889999999 9999999999
Q ss_pred cEEEEECCCCC----------CCcEEEeCCC
Q 036317 84 SVYAWSARSGK----------EPPVIKWAPG 104 (106)
Q Consensus 84 ~i~~wd~~~~~----------~v~~i~~sp~ 104 (106)
.|++||+++++ .+.+++|+|+
T Consensus 164 ~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~ 194 (337)
T 1gxr_A 164 NIAVWDLHNQTLVRQFQGHTDGASCIDISND 194 (337)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEECTT
T ss_pred cEEEEeCCCCceeeeeecccCceEEEEECCC
Confidence 99999999876 7888999886
No 56
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.52 E-value=4.3e-14 Score=101.26 Aligned_cols=76 Identities=7% Similarity=0.107 Sum_probs=67.6
Q ss_pred cCCCCCCeeEEEECC--------CCCeEEEEeCCCeEEEEEcCCCce----eccCCCcEEEEEecCCcceeeeeeeccc-
Q 036317 8 DGGDVSDANEVKLSN--------DGRLMLLTTLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVALSVLILRS- 74 (106)
Q Consensus 8 ~~~~~~~v~~v~~sp--------dg~~l~~~~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~- 74 (106)
+.+|.+.|++++|+| ||++|++++.|++++|||+.++.. ..++..+.+++|+|++ .
T Consensus 132 ~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~-----------~~ 200 (393)
T 4gq1_A 132 KSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSN-----------PN 200 (393)
T ss_dssp TTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTE-----------EE
T ss_pred cCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCC-----------Cc
Confidence 467888999999998 899999999999999999987654 4577788899999987 5
Q ss_pred EEEEecCCCcEEEEECCCCC
Q 036317 75 WVLEGSGDGSVYAWSARSGK 94 (106)
Q Consensus 75 ~i~t~s~d~~i~~wd~~~~~ 94 (106)
++++++.|++|++||+++++
T Consensus 201 ~l~~~~~d~~v~~wd~~t~~ 220 (393)
T 4gq1_A 201 QLIVGERNGNIRIFDWTLNL 220 (393)
T ss_dssp EEEEEETTSEEEEEETTCCC
T ss_pred eEEecCCCCEEEEEECCCCc
Confidence 79999999999999999876
No 57
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.52 E-value=1.3e-13 Score=104.74 Aligned_cols=88 Identities=11% Similarity=0.174 Sum_probs=76.2
Q ss_pred ecCCCCCCeeEEEECCCC-CeEEEEeCCCeEEEEEcCCCce---------eccCCCcEEEEEecCCcceeeeeeecccEE
Q 036317 7 SDGGDVSDANEVKLSNDG-RLMLLTTLEGHIHVLHSFQGTL---------PVSHNSTLEASFSQHLSLVALSVLILRSWV 76 (106)
Q Consensus 7 ~~~~~~~~v~~v~~spdg-~~l~~~~~~~~i~l~d~~~~~~---------~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i 76 (106)
.+.+|.+.|++++|+|++ +++++++.|++|++||+.+... ..|...+.+++|+|++ ++|
T Consensus 377 ~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g-----------~~l 445 (694)
T 3dm0_A 377 TMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDG-----------QFA 445 (694)
T ss_dssp EEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTS-----------SEE
T ss_pred hcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCC-----------CEE
Confidence 356889999999999875 7889999999999999875421 4567788899999999 999
Q ss_pred EEecCCCcEEEEECCCCC----------CCcEEEeCCCC
Q 036317 77 LEGSGDGSVYAWSARSGK----------EPPVIKWAPGS 105 (106)
Q Consensus 77 ~t~s~d~~i~~wd~~~~~----------~v~~i~~sp~~ 105 (106)
++|+.|++|++||+.+++ .|.+++|+|+.
T Consensus 446 ~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~ 484 (694)
T 3dm0_A 446 LSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDN 484 (694)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTS
T ss_pred EEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCC
Confidence 999999999999999886 78999999863
No 58
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.52 E-value=4.2e-14 Score=99.24 Aligned_cols=88 Identities=9% Similarity=0.026 Sum_probs=68.6
Q ss_pred eecCCCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCc---e----eccCCCcEEEEEecCCcceeeeeeecccEEEE
Q 036317 6 FSDGGDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGT---L----PVSHNSTLEASFSQHLSLVALSVLILRSWVLE 78 (106)
Q Consensus 6 ~~~~~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~---~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t 78 (106)
..+.+|.+.|.+++|+|+|+++++++.|+.+++||..+++ . ..+...+..+.|+|++ +++++
T Consensus 49 ~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-----------~~l~~ 117 (377)
T 3dwl_C 49 RTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNE-----------DKFAV 117 (377)
T ss_dssp CCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTS-----------SCCEE
T ss_pred EEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCC-----------CEEEE
Confidence 3445677899999999999999999999999999999877 2 3466678889999999 99999
Q ss_pred ecCCCcEEEEECCCCC--------------CCcEEEeCCC
Q 036317 79 GSGDGSVYAWSARSGK--------------EPPVIKWAPG 104 (106)
Q Consensus 79 ~s~d~~i~~wd~~~~~--------------~v~~i~~sp~ 104 (106)
++.|+.|++||+++++ .|.+++|+|+
T Consensus 118 ~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 157 (377)
T 3dwl_C 118 GSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPN 157 (377)
T ss_dssp EESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTT
T ss_pred EecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCC
Confidence 9999999999998763 5788999886
No 59
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.52 E-value=1.3e-14 Score=101.82 Aligned_cols=82 Identities=11% Similarity=0.226 Sum_probs=68.3
Q ss_pred CCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCC--ce----eccCCCcEEEEEecCCcceeeeeeecccEEEEecCCCcE
Q 036317 12 VSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQG--TL----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSV 85 (106)
Q Consensus 12 ~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~--~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i 85 (106)
.++|++++|+|+|+++++++.|+.+++||..++ +. ..+...+..+.|+|++ ++|++++.|++|
T Consensus 11 ~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~-----------~~l~s~s~d~~v 79 (377)
T 3dwl_C 11 PKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKS-----------NRIVTCSQDRNA 79 (377)
T ss_dssp SSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTT-----------CCEEEEETTSSE
T ss_pred CCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCC-----------CEEEEEeCCCeE
Confidence 568999999999999999999999999999987 33 4566778899999999 999999999999
Q ss_pred EEEECCCCC-------------CCcEEEeCCC
Q 036317 86 YAWSARSGK-------------EPPVIKWAPG 104 (106)
Q Consensus 86 ~~wd~~~~~-------------~v~~i~~sp~ 104 (106)
++||+++++ .|.+++|+|+
T Consensus 80 ~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 111 (377)
T 3dwl_C 80 YVYEKRPDGTWKQTLVLLRLNRAATFVRWSPN 111 (377)
T ss_dssp EEC------CCCCEEECCCCSSCEEEEECCTT
T ss_pred EEEEcCCCCceeeeeEecccCCceEEEEECCC
Confidence 999998754 7888999886
No 60
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.51 E-value=3e-13 Score=92.65 Aligned_cols=87 Identities=17% Similarity=0.257 Sum_probs=76.3
Q ss_pred ecCCCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce----eccCCCcEEEEEecCCcceeeeeeecccEEEEecCC
Q 036317 7 SDGGDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGD 82 (106)
Q Consensus 7 ~~~~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d 82 (106)
.+..+...|.+++|+|+++++++++.++.+++||..+++. ..+...+..+.|+|++ +++++++.|
T Consensus 136 ~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~-----------~~l~~~~~d 204 (337)
T 1gxr_A 136 ELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDG-----------TKLWTGGLD 204 (337)
T ss_dssp EEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTS-----------SEEEEEETT
T ss_pred ecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCC-----------CEEEEEecC
Confidence 3445566899999999999999999999999999998876 3456678889999999 999999999
Q ss_pred CcEEEEECCCCC---------CCcEEEeCCC
Q 036317 83 GSVYAWSARSGK---------EPPVIKWAPG 104 (106)
Q Consensus 83 ~~i~~wd~~~~~---------~v~~i~~sp~ 104 (106)
+.|++||+++++ .+.+++|+|+
T Consensus 205 g~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~ 235 (337)
T 1gxr_A 205 NTVRSWDLREGRQLQQHDFTSQIFSLGYCPT 235 (337)
T ss_dssp SEEEEEETTTTEEEEEEECSSCEEEEEECTT
T ss_pred CcEEEEECCCCceEeeecCCCceEEEEECCC
Confidence 999999999887 7888899886
No 61
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.51 E-value=2e-13 Score=94.20 Aligned_cols=88 Identities=16% Similarity=0.115 Sum_probs=75.0
Q ss_pred eeec-CCCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCc----e---eccCCCcEEEEEecCCcceeeeeeeccc-E
Q 036317 5 IFSD-GGDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGT----L---PVSHNSTLEASFSQHLSLVALSVLILRS-W 75 (106)
Q Consensus 5 ~~~~-~~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~----~---~~~~~~~~~~~fs~d~~~~~~~~~~~~~-~ 75 (106)
.+++ .+|.+.|.+++|+|+|+++++++.|+.+++||..+++ . ..+...+..++|+|++ + +
T Consensus 3 ~~~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-----------~~~ 71 (342)
T 1yfq_A 3 IVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNT-----------DLQ 71 (342)
T ss_dssp EEECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESS-----------SEE
T ss_pred ceecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCC-----------CcE
Confidence 3444 4566799999999999999999999999999998877 3 4466678889999999 9 9
Q ss_pred EEEecCCCcEEEEEC-CCCC-----------CCcEEEeCC
Q 036317 76 VLEGSGDGSVYAWSA-RSGK-----------EPPVIKWAP 103 (106)
Q Consensus 76 i~t~s~d~~i~~wd~-~~~~-----------~v~~i~~sp 103 (106)
+++|+.|+.|++||+ ++++ .|.+++|+|
T Consensus 72 l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~ 111 (342)
T 1yfq_A 72 IYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYG 111 (342)
T ss_dssp EEEEETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEET
T ss_pred EEEEcCCCeEEEEEeccCCceEeccccCCCCceEEEEeCC
Confidence 999999999999999 7654 567888876
No 62
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.51 E-value=1.9e-13 Score=93.34 Aligned_cols=67 Identities=13% Similarity=0.269 Sum_probs=57.4
Q ss_pred eeEEEECCCCCeEEEEeCCCeEEEEEcCCCce------eccCCCcEEEEEecCCcceeeeeeecccEEEEecCCCcEEEE
Q 036317 15 ANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL------PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSVYAW 88 (106)
Q Consensus 15 v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~------~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~~w 88 (106)
.+.|+||+++ .| +++.|++|+|||..+++. ..+...+.++.|+|++ +++++|+.|++|++|
T Consensus 28 ~~~l~WS~~~-~l-Avg~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~-----------~~l~sgs~Dg~v~iw 94 (318)
T 4ggc_A 28 LNLVDWSSGN-VL-AVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEG-----------NYLAVGTSSAEVQLW 94 (318)
T ss_dssp CBCEEECTTS-EE-EEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTS-----------SEEEEEETTSEEEEE
T ss_pred ceEEEECCCC-EE-EEEeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCC-----------CEEEEEECCCcEEEe
Confidence 5789999987 44 445699999999999986 2344567889999999 999999999999999
Q ss_pred ECCCCC
Q 036317 89 SARSGK 94 (106)
Q Consensus 89 d~~~~~ 94 (106)
|+++++
T Consensus 95 ~~~~~~ 100 (318)
T 4ggc_A 95 DVQQQK 100 (318)
T ss_dssp ETTTTE
T ss_pred ecCCce
Confidence 999987
No 63
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.50 E-value=1.8e-13 Score=96.43 Aligned_cols=87 Identities=7% Similarity=-0.063 Sum_probs=75.3
Q ss_pred ecCCCCCCeeEEEECCCC-CeEEEEeCCCeEEEEEcCCCce------eccCCCcEEEEEec-CCcceeeeeeecccEEEE
Q 036317 7 SDGGDVSDANEVKLSNDG-RLMLLTTLEGHIHVLHSFQGTL------PVSHNSTLEASFSQ-HLSLVALSVLILRSWVLE 78 (106)
Q Consensus 7 ~~~~~~~~v~~v~~spdg-~~l~~~~~~~~i~l~d~~~~~~------~~~~~~~~~~~fs~-d~~~~~~~~~~~~~~i~t 78 (106)
.+.++.+.|.+++|+|+| +++++++.|+.|++||..+++. ..+...+..++|+| ++ +++++
T Consensus 68 ~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-----------~~l~s 136 (383)
T 3ei3_B 68 TASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNT-----------NQLFV 136 (383)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEE-----------EEEEE
T ss_pred eccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCC-----------CEEEE
Confidence 346777899999999999 9999999999999999988766 13666788899999 78 99999
Q ss_pred ecCCCcEEEEECCCCC------------CCcEEEeCCC
Q 036317 79 GSGDGSVYAWSARSGK------------EPPVIKWAPG 104 (106)
Q Consensus 79 ~s~d~~i~~wd~~~~~------------~v~~i~~sp~ 104 (106)
++.|+.|++||+++.. .+.+++|+|+
T Consensus 137 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~ 174 (383)
T 3ei3_B 137 SSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVS 174 (383)
T ss_dssp EETTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETT
T ss_pred EeCCCEEEEEECCCCceEEEeccCCCCCCeEEEEECCC
Confidence 9999999999998643 4889999886
No 64
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.50 E-value=1.7e-13 Score=93.52 Aligned_cols=86 Identities=15% Similarity=0.157 Sum_probs=72.1
Q ss_pred eeecCCCCCCeeEEEECCCC----CeEEEEeCCCeEEEEEcCCCc-----------------------------------
Q 036317 5 IFSDGGDVSDANEVKLSNDG----RLMLLTTLEGHIHVLHSFQGT----------------------------------- 45 (106)
Q Consensus 5 ~~~~~~~~~~v~~v~~spdg----~~l~~~~~~~~i~l~d~~~~~----------------------------------- 45 (106)
...+.+|.+.|.+++|+|++ +++++++.|+.|++||..++.
T Consensus 207 ~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (351)
T 3f3f_A 207 AAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEE 286 (351)
T ss_dssp EEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC-----------------------------------
T ss_pred eeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccce
Confidence 34456778899999999998 889999999999999987641
Q ss_pred -----------e----eccCCCcEEEEEecCCcceeeeeeecccEEEEecCCCcEEEEECCCCCCCcEEEe
Q 036317 46 -----------L----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSVYAWSARSGKEPPVIKW 101 (106)
Q Consensus 46 -----------~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~~wd~~~~~~v~~i~~ 101 (106)
. ..+...+..+.|+|++ ++|++++.|+.|++||+++++...++.-
T Consensus 287 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~-----------~~l~s~~~dg~v~iw~~~~~~~~~~~~~ 346 (351)
T 3f3f_A 287 KAELQSNLQVELLSEHDDHNGEVWSVSWNLTG-----------TILSSAGDDGKVRLWKATYSNEFKCMSV 346 (351)
T ss_dssp ----CCSEEEEEEEEECTTSSCEEEEEECSSS-----------CCEEEEETTSCEEEEEECTTSCEEEEEE
T ss_pred eeeecccccccEEEEEecccccEEEEEEcCCC-----------CEEEEecCCCcEEEEecCcCcchhheee
Confidence 1 2355678889999999 9999999999999999999886666653
No 65
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.50 E-value=1.8e-13 Score=104.01 Aligned_cols=81 Identities=20% Similarity=0.179 Sum_probs=68.2
Q ss_pred CCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce--eccCC-----CcEEEEEecCCcceeeeeeecccEEEEecCCCc
Q 036317 12 VSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL--PVSHN-----STLEASFSQHLSLVALSVLILRSWVLEGSGDGS 84 (106)
Q Consensus 12 ~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~--~~~~~-----~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~ 84 (106)
...|.+++|||||+.+++++.++++++||... .. ..++. .+.+++||||| ++|++|++||+
T Consensus 85 ~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~-~l~~l~~~~~~~~~sv~svafSPDG-----------~~LAsgs~DGt 152 (588)
T 2j04_A 85 VCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK-MLTNLDSKGNLSSRTYHCFEWNPIE-----------SSIVVGNEDGE 152 (588)
T ss_dssp SCCEEEEEECSSSSCEEEEETTSCEEEEETTE-EEEECCCSSCSTTTCEEEEEECSSS-----------SCEEEEETTSE
T ss_pred CCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc-eeeeccCCCccccccEEEEEEcCCC-----------CEEEEEcCCCE
Confidence 45799999999999999999999999999533 22 12332 37789999999 99999999999
Q ss_pred EEEEECCCCC---------------------CCcEEEeCCC
Q 036317 85 VYAWSARSGK---------------------EPPVIKWAPG 104 (106)
Q Consensus 85 i~~wd~~~~~---------------------~v~~i~~sp~ 104 (106)
|++||+++++ +|.+++|+|+
T Consensus 153 VkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPd 193 (588)
T 2j04_A 153 LQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYED 193 (588)
T ss_dssp EEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETT
T ss_pred EEEEECCCCccccccceeeeeeecccccccccEEEEEEcCC
Confidence 9999998772 7888999986
No 66
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.50 E-value=3.7e-13 Score=97.01 Aligned_cols=92 Identities=15% Similarity=0.212 Sum_probs=67.1
Q ss_pred CCeeEEEECC---CCCeEEEEeCCCeEEEEEcCCCce----eccC---CCcEEEEEecCCcceeeee-------------
Q 036317 13 SDANEVKLSN---DGRLMLLTTLEGHIHVLHSFQGTL----PVSH---NSTLEASFSQHLSLVALSV------------- 69 (106)
Q Consensus 13 ~~v~~v~~sp---dg~~l~~~~~~~~i~l~d~~~~~~----~~~~---~~~~~~~fs~d~~~~~~~~------------- 69 (106)
..++.++|+| +++++++++.|++|+|||+.+|+. ..++ ..+..++|+|||++++...
T Consensus 179 ~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~ 258 (356)
T 2w18_A 179 PEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSP 258 (356)
T ss_dssp CSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------C
T ss_pred CceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCC
Confidence 3556666666 567788999999999999999986 2222 2455678999998874200
Q ss_pred -----------------e----ecc------------cEEEEecCCCcEEEEECCCCC-----------CCcEEEeCCC
Q 036317 70 -----------------L----ILR------------SWVLEGSGDGSVYAWSARSGK-----------EPPVIKWAPG 104 (106)
Q Consensus 70 -----------------~----~~~------------~~i~t~s~d~~i~~wd~~~~~-----------~v~~i~~sp~ 104 (106)
. +.. ..+++++.|++|+|||+++|+ .+.+++|+|+
T Consensus 259 D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPD 337 (356)
T 2w18_A 259 VFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGT 337 (356)
T ss_dssp CEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSS
T ss_pred CcEEEEEECCCCEEEEEEEeeccCCCcceeEccccCCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCC
Confidence 0 001 147899999999999999997 3446899996
No 67
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.50 E-value=1.4e-13 Score=95.79 Aligned_cols=88 Identities=16% Similarity=0.225 Sum_probs=74.7
Q ss_pred eecCCCCCCeeEEEECC--CCCeEEEEeCCCeEEEEEcCCCce------eccCCCcEEEEEecC--CcceeeeeeecccE
Q 036317 6 FSDGGDVSDANEVKLSN--DGRLMLLTTLEGHIHVLHSFQGTL------PVSHNSTLEASFSQH--LSLVALSVLILRSW 75 (106)
Q Consensus 6 ~~~~~~~~~v~~v~~sp--dg~~l~~~~~~~~i~l~d~~~~~~------~~~~~~~~~~~fs~d--~~~~~~~~~~~~~~ 75 (106)
..+.+|.+.|.+++|+| +|+++++++.|++|++||..+++. ..+...+..++|+|+ + .+
T Consensus 51 ~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g-----------~~ 119 (316)
T 3bg1_A 51 ADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYG-----------LI 119 (316)
T ss_dssp EEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTC-----------SC
T ss_pred EEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCC-----------cE
Confidence 34567888999999986 489999999999999999988742 346667889999998 8 89
Q ss_pred EEEecCCCcEEEEECCCCC-------------CCcEEEeCCC
Q 036317 76 VLEGSGDGSVYAWSARSGK-------------EPPVIKWAPG 104 (106)
Q Consensus 76 i~t~s~d~~i~~wd~~~~~-------------~v~~i~~sp~ 104 (106)
+++|+.|++|++||++++. .+.+++|+|.
T Consensus 120 lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 161 (316)
T 3bg1_A 120 LACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPA 161 (316)
T ss_dssp EEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCC
T ss_pred EEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccc
Confidence 9999999999999998652 6788999886
No 68
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.49 E-value=2.9e-13 Score=94.17 Aligned_cols=87 Identities=10% Similarity=0.058 Sum_probs=75.6
Q ss_pred ecCCCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce------eccCCCcEEEEEecCCcceeeeeeecccEEEEec
Q 036317 7 SDGGDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL------PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGS 80 (106)
Q Consensus 7 ~~~~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~------~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s 80 (106)
.+.++...|.+++|+|+++++++++.|+.+++||..+++. ..+...+..+.|+|++ +++++++
T Consensus 47 ~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~-----------~~l~~~~ 115 (372)
T 1k8k_C 47 ELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNE-----------KKFAVGS 115 (372)
T ss_dssp EEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTS-----------SEEEEEE
T ss_pred eecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCC-----------CEEEEEe
Confidence 3456778999999999999999999999999999988864 2355677889999999 9999999
Q ss_pred CCCcEEEEECCCCC--------------CCcEEEeCCC
Q 036317 81 GDGSVYAWSARSGK--------------EPPVIKWAPG 104 (106)
Q Consensus 81 ~d~~i~~wd~~~~~--------------~v~~i~~sp~ 104 (106)
.|+.|++||++.++ .|.+++|+|+
T Consensus 116 ~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 153 (372)
T 1k8k_C 116 GSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPN 153 (372)
T ss_dssp TTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTT
T ss_pred CCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCC
Confidence 99999999998764 6789999886
No 69
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.49 E-value=4.3e-13 Score=93.95 Aligned_cols=71 Identities=18% Similarity=0.269 Sum_probs=63.0
Q ss_pred CCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce-----ec-cCCCcEEEEEecCCcceeeeeeecccEEEEecCCCcE
Q 036317 12 VSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL-----PV-SHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSV 85 (106)
Q Consensus 12 ~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~-----~~-~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i 85 (106)
...+.+++|+|||+++++++.|+.|++||..+++. .. +.+.+..++|+|++ +++++++++ +|
T Consensus 170 ~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g-----------~~l~s~~~~-~v 237 (343)
T 3lrv_A 170 DVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNG-----------YWMVVECDQ-TV 237 (343)
T ss_dssp SCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTS-----------SEEEEEESS-BE
T ss_pred CCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCC-----------CEEEEEeCC-eE
Confidence 34799999999999999999999999999998875 33 56778899999999 999999955 99
Q ss_pred EEEECCCCC
Q 036317 86 YAWSARSGK 94 (106)
Q Consensus 86 ~~wd~~~~~ 94 (106)
++||+++++
T Consensus 238 ~iwd~~~~~ 246 (343)
T 3lrv_A 238 VCFDLRKDV 246 (343)
T ss_dssp EEEETTSST
T ss_pred EEEEcCCCC
Confidence 999999886
No 70
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.49 E-value=8.2e-13 Score=90.88 Aligned_cols=86 Identities=17% Similarity=0.254 Sum_probs=71.7
Q ss_pred ecCCCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce---eccCCCcEEEEEecCCcceeeeeeecccEEEEecCCC
Q 036317 7 SDGGDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL---PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDG 83 (106)
Q Consensus 7 ~~~~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~---~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~ 83 (106)
.+.++.+.|++++|+|+|+++++++.|+.+++||..+++. ......+..+.|+|++ .++ +++.|+
T Consensus 210 ~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~-----------~~~-~~~~d~ 277 (340)
T 4aow_A 210 NHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNR-----------YWL-CAATGP 277 (340)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSSS-----------SEE-EEEETT
T ss_pred EecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCCCC-----------cee-eccCCC
Confidence 3456778999999999999999999999999999998876 3345567789999988 655 555789
Q ss_pred cEEEEECCCCC-------------------CCcEEEeCCC
Q 036317 84 SVYAWSARSGK-------------------EPPVIKWAPG 104 (106)
Q Consensus 84 ~i~~wd~~~~~-------------------~v~~i~~sp~ 104 (106)
.|++||++++. .|.+++|+|+
T Consensus 278 ~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~d 317 (340)
T 4aow_A 278 SIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSAD 317 (340)
T ss_dssp EEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTT
T ss_pred EEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCC
Confidence 99999998753 6889999986
No 71
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.48 E-value=5.8e-13 Score=90.54 Aligned_cols=87 Identities=11% Similarity=0.090 Sum_probs=74.6
Q ss_pred eecCCCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce----eccCCCcEEEEEecCCcceeeeeeecccEEEEecC
Q 036317 6 FSDGGDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSG 81 (106)
Q Consensus 6 ~~~~~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~ 81 (106)
..+.+|.+.|++++| |+++++++++.|+.+++||..+++. ..+...+..+.|+|++ +++++++.
T Consensus 12 ~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~-----------~~l~~~~~ 79 (313)
T 3odt_A 12 ATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEK-----------ELLLFGGK 79 (313)
T ss_dssp EEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTT-----------TEEEEEET
T ss_pred HHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCC-----------CEEEEecC
Confidence 345788899999999 9999999999999999999988776 4466778899999999 99999999
Q ss_pred CCcEEEEECCCCC-------------CCcEEEeCCC
Q 036317 82 DGSVYAWSARSGK-------------EPPVIKWAPG 104 (106)
Q Consensus 82 d~~i~~wd~~~~~-------------~v~~i~~sp~ 104 (106)
|+.+++|++.+.. .+.+++|+++
T Consensus 80 dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 115 (313)
T 3odt_A 80 DTMINGVPLFATSGEDPLYTLIGHQGNVCSLSFQDG 115 (313)
T ss_dssp TSCEEEEETTCCTTSCC-CEECCCSSCEEEEEEETT
T ss_pred CCeEEEEEeeecCCCCcccchhhcccCEEEEEecCC
Confidence 9999999998753 5666776543
No 72
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.48 E-value=1.3e-12 Score=89.19 Aligned_cols=98 Identities=14% Similarity=0.198 Sum_probs=69.1
Q ss_pred eeecCCCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce----eccCCCcEEEEEecCCccee--------------
Q 036317 5 IFSDGGDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVA-------------- 66 (106)
Q Consensus 5 ~~~~~~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~-------------- 66 (106)
.++..+|...|++++|+|+|+++++++.|+++++||..+++. ..+...+. .+++++++++
T Consensus 60 ~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~--~~~~~~~~l~s~~~~~~~~~~~~~ 137 (318)
T 4ggc_A 60 LLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVG--SLSWNSYILSSGSRSGHIHHHDVR 137 (318)
T ss_dssp EEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEE--EEEEETTEEEEEETTSEEEEEETT
T ss_pred EEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEE--EeecCCCEEEEEecCCceEeeecC
Confidence 345566677899999999999999999999999999998876 22222221 2222222222
Q ss_pred ------------------eeeeecccEEEEecCCCcEEEEECCCCC--------------CCcEEEeCCC
Q 036317 67 ------------------LSVLILRSWVLEGSGDGSVYAWSARSGK--------------EPPVIKWAPG 104 (106)
Q Consensus 67 ------------------~~~~~~~~~i~t~s~d~~i~~wd~~~~~--------------~v~~i~~sp~ 104 (106)
+.+....+++++++.|++|++||+++++ .+.++.++|.
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 207 (318)
T 4ggc_A 138 VAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPW 207 (318)
T ss_dssp SSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTT
T ss_pred CCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCC
Confidence 1112222889999999999999999876 5666777664
No 73
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.48 E-value=3.1e-13 Score=106.43 Aligned_cols=84 Identities=18% Similarity=0.181 Sum_probs=74.5
Q ss_pred CCCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce---eccCCCcEEEEEecCCcceeeeeeecccEEEEecCCCcE
Q 036317 9 GGDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL---PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSV 85 (106)
Q Consensus 9 ~~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~---~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i 85 (106)
.++.+.|++++|+|||+++|+++.|++|+|||..+.+. ..+...+..+.|+| + ++|++++.|++|
T Consensus 14 ~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g-----------~~L~S~s~D~~v 81 (902)
T 2oaj_A 14 YGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-G-----------IYLVVINAKDTV 81 (902)
T ss_dssp EECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEET-T-----------TEEEEEETTCEE
T ss_pred cCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-C-----------CEEEEEECcCeE
Confidence 46778999999999999999999999999999887765 23456788999999 9 999999999999
Q ss_pred EEEECCCCC---------CCcEEEeCCC
Q 036317 86 YAWSARSGK---------EPPVIKWAPG 104 (106)
Q Consensus 86 ~~wd~~~~~---------~v~~i~~sp~ 104 (106)
++||+++++ .|.+++|+|+
T Consensus 82 ~lWd~~~~~~~~~~~~~~~V~~v~~sp~ 109 (902)
T 2oaj_A 82 YVLSLYSQKVLTTVFVPGKITSIDTDAS 109 (902)
T ss_dssp EEEETTTCSEEEEEECSSCEEEEECCTT
T ss_pred EEEECCCCcEEEEEcCCCCEEEEEECCC
Confidence 999999887 6888999886
No 74
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.47 E-value=7.7e-13 Score=91.92 Aligned_cols=87 Identities=18% Similarity=0.289 Sum_probs=76.0
Q ss_pred ecCCCCCCeeEEEECCC--CCeEEEEeCCCeEEEEEcCCCce------eccCCCcEEEEEecC--CcceeeeeeecccEE
Q 036317 7 SDGGDVSDANEVKLSND--GRLMLLTTLEGHIHVLHSFQGTL------PVSHNSTLEASFSQH--LSLVALSVLILRSWV 76 (106)
Q Consensus 7 ~~~~~~~~v~~v~~spd--g~~l~~~~~~~~i~l~d~~~~~~------~~~~~~~~~~~fs~d--~~~~~~~~~~~~~~i 76 (106)
.+.+|.+.|.+++|+|+ ++++++++.|+.|++||..+++. ..+...+..+.|+|+ + +++
T Consensus 50 ~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-----------~~l 118 (379)
T 3jrp_A 50 TLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYG-----------PLL 118 (379)
T ss_dssp EECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGC-----------SEE
T ss_pred EecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCC-----------CEE
Confidence 34567789999999987 99999999999999999998863 335667888999999 9 999
Q ss_pred EEecCCCcEEEEECCCCC------------CCcEEEeCCC
Q 036317 77 LEGSGDGSVYAWSARSGK------------EPPVIKWAPG 104 (106)
Q Consensus 77 ~t~s~d~~i~~wd~~~~~------------~v~~i~~sp~ 104 (106)
++++.|+.|++||+++++ .|.+++|+|.
T Consensus 119 ~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~ 158 (379)
T 3jrp_A 119 LVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPA 158 (379)
T ss_dssp EEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCC
T ss_pred EEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCc
Confidence 999999999999999873 7889999983
No 75
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.47 E-value=1.8e-13 Score=105.55 Aligned_cols=86 Identities=16% Similarity=0.282 Sum_probs=74.3
Q ss_pred cCCCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCc--e----eccCCCcEEEEEecC--CcceeeeeeecccEEEEe
Q 036317 8 DGGDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGT--L----PVSHNSTLEASFSQH--LSLVALSVLILRSWVLEG 79 (106)
Q Consensus 8 ~~~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~--~----~~~~~~~~~~~fs~d--~~~~~~~~~~~~~~i~t~ 79 (106)
+.+|.+.|++++|+|+|+++++++.|+.|++||..++. . ..+.+.+..+.|+|+ + +++++|
T Consensus 5 l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~-----------~~l~s~ 73 (753)
T 3jro_A 5 ANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFG-----------TILASC 73 (753)
T ss_dssp ---CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSC-----------SEEEEE
T ss_pred cccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCC-----------CEEEEE
Confidence 46788999999999999999999999999999987543 2 456678889999988 9 999999
Q ss_pred cCCCcEEEEECCCCC------------CCcEEEeCCC
Q 036317 80 SGDGSVYAWSARSGK------------EPPVIKWAPG 104 (106)
Q Consensus 80 s~d~~i~~wd~~~~~------------~v~~i~~sp~ 104 (106)
+.||+|++||+++++ .|.+++|+|+
T Consensus 74 s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~ 110 (753)
T 3jro_A 74 SYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPH 110 (753)
T ss_dssp ETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCG
T ss_pred eCCCeEEEEECCCCcccccccccCCCCCeEEEEECCC
Confidence 999999999999874 8899999986
No 76
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.47 E-value=5.8e-13 Score=94.80 Aligned_cols=86 Identities=15% Similarity=0.161 Sum_probs=73.8
Q ss_pred cCCCCCCeeEEEECCCC-CeEEEEeCCCeEEEEEcCCCce---e---ccCCCcEEEEEecCCcceeeeeeecccEEEEec
Q 036317 8 DGGDVSDANEVKLSNDG-RLMLLTTLEGHIHVLHSFQGTL---P---VSHNSTLEASFSQHLSLVALSVLILRSWVLEGS 80 (106)
Q Consensus 8 ~~~~~~~v~~v~~spdg-~~l~~~~~~~~i~l~d~~~~~~---~---~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s 80 (106)
+.+|...|.+++|+|++ +++++++.|+.+++||+.+++. . .+...+..++|+|++ ++|++++
T Consensus 127 ~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~-----------~~l~~~~ 195 (402)
T 2aq5_A 127 LEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDG-----------ALICTSC 195 (402)
T ss_dssp EECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTS-----------SCEEEEE
T ss_pred ecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCC-----------CEEEEEe
Confidence 44667799999999998 6899999999999999998876 2 245567889999999 9999999
Q ss_pred CCCcEEEEECCCCC------------CCcEEEeCCC
Q 036317 81 GDGSVYAWSARSGK------------EPPVIKWAPG 104 (106)
Q Consensus 81 ~d~~i~~wd~~~~~------------~v~~i~~sp~ 104 (106)
.|+.|++||+++++ .+.++.|+|+
T Consensus 196 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (402)
T 2aq5_A 196 RDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSE 231 (402)
T ss_dssp TTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECST
T ss_pred cCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCC
Confidence 99999999999876 3677888875
No 77
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.46 E-value=1e-12 Score=90.84 Aligned_cols=82 Identities=16% Similarity=0.211 Sum_probs=71.2
Q ss_pred cCCCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce---eccCCCcEEEEE--ecCCcceeeeeeecccEEEEecCC
Q 036317 8 DGGDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL---PVSHNSTLEASF--SQHLSLVALSVLILRSWVLEGSGD 82 (106)
Q Consensus 8 ~~~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~---~~~~~~~~~~~f--s~d~~~~~~~~~~~~~~i~t~s~d 82 (106)
+.+|.+.|.+++|+|+++++++++.|+.+++||..+++. ..+...+..+.| +|++ +++++++.|
T Consensus 82 ~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~-----------~~l~~~~~d 150 (368)
T 3mmy_A 82 QQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNY-----------SCVMTGSWD 150 (368)
T ss_dssp EEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSC-----------EEEEEEETT
T ss_pred eccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceeeccccCceEEEEEEeCCCC-----------CEEEEccCC
Confidence 345677999999999999999999999999999998887 456677888999 8999 999999999
Q ss_pred CcEEEEECCCCCCCcEEE
Q 036317 83 GSVYAWSARSGKEPPVIK 100 (106)
Q Consensus 83 ~~i~~wd~~~~~~v~~i~ 100 (106)
+.|++||+++++.+..+.
T Consensus 151 g~i~vwd~~~~~~~~~~~ 168 (368)
T 3mmy_A 151 KTLKFWDTRSSNPMMVLQ 168 (368)
T ss_dssp SEEEEECSSCSSCSEEEE
T ss_pred CcEEEEECCCCcEEEEEe
Confidence 999999999988544443
No 78
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.46 E-value=3.6e-13 Score=102.66 Aligned_cols=84 Identities=14% Similarity=0.149 Sum_probs=75.9
Q ss_pred CCCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce----eccCCCcEEEEEecCCcceeeeeeecccEEEEecCCCc
Q 036317 9 GGDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGS 84 (106)
Q Consensus 9 ~~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~ 84 (106)
.++.+.|.+++|+|+|+++++++.++.+++||..+++. ..+...+..+.|+|++ ++|++++.|++
T Consensus 52 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~-----------~~l~~~~~dg~ 120 (814)
T 3mkq_A 52 QVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTK-----------PYVLSGSDDLT 120 (814)
T ss_dssp ECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSS-----------SEEEEEETTSE
T ss_pred ecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCC-----------CEEEEEcCCCE
Confidence 45677999999999999999999999999999999876 4466778899999999 99999999999
Q ss_pred EEEEECCCCC-----------CCcEEEeCC
Q 036317 85 VYAWSARSGK-----------EPPVIKWAP 103 (106)
Q Consensus 85 i~~wd~~~~~-----------~v~~i~~sp 103 (106)
|++||++++. .+.+++|+|
T Consensus 121 i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p 150 (814)
T 3mkq_A 121 VKLWNWENNWALEQTFEGHEHFVMCVAFNP 150 (814)
T ss_dssp EEEEEGGGTSEEEEEEECCSSCEEEEEEET
T ss_pred EEEEECCCCceEEEEEcCCCCcEEEEEEEc
Confidence 9999999873 788999998
No 79
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.46 E-value=7e-13 Score=95.23 Aligned_cols=78 Identities=13% Similarity=0.267 Sum_probs=63.7
Q ss_pred CeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce------eccCCCcEEEEEecCCcceeeeeeecccEEEEecCCCcEEE
Q 036317 14 DANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL------PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSVYA 87 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~------~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~~ 87 (106)
-++.|+||+++ .|++ +.|++|+|||+.+|+. ..+...+.+++|+||| ++|++|+.|++|++
T Consensus 107 y~~~l~wS~~n-~lAv-gld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg-----------~~lasgs~Dg~v~i 173 (420)
T 4gga_A 107 YLNLVDWSSGN-VLAV-ALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEG-----------NYLAVGTSSAEVQL 173 (420)
T ss_dssp TCBCEEECTTS-EEEE-EETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTS-----------SEEEEEETTSCEEE
T ss_pred cceeEEECCCC-EEEE-EeCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCC-----------CEEEEEECCCeEEE
Confidence 46789999865 4544 5599999999999986 2345578899999999 99999999999999
Q ss_pred EECCCCC----------CCcEEEeCCC
Q 036317 88 WSARSGK----------EPPVIKWAPG 104 (106)
Q Consensus 88 wd~~~~~----------~v~~i~~sp~ 104 (106)
||+++++ .+.++++++.
T Consensus 174 Wd~~~~~~~~~~~~h~~~v~~~s~~~~ 200 (420)
T 4gga_A 174 WDVQQQKRLRNMTSHSARVGSLSWNSY 200 (420)
T ss_dssp EETTTTEEEEEECCCSSCEEEEEEETT
T ss_pred EEcCCCcEEEEEeCCCCceEEEeeCCC
Confidence 9999987 5666666654
No 80
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.45 E-value=1.3e-12 Score=91.59 Aligned_cols=86 Identities=15% Similarity=0.151 Sum_probs=73.5
Q ss_pred cCCCCCCeeEEEECC-CCCeEEEEeCCCeEEEEEcCCCce----e-------------ccCCCcEEEEEec-CCcceeee
Q 036317 8 DGGDVSDANEVKLSN-DGRLMLLTTLEGHIHVLHSFQGTL----P-------------VSHNSTLEASFSQ-HLSLVALS 68 (106)
Q Consensus 8 ~~~~~~~v~~v~~sp-dg~~l~~~~~~~~i~l~d~~~~~~----~-------------~~~~~~~~~~fs~-d~~~~~~~ 68 (106)
+.+|.+.|++++|+| +|+++++++.|+.+++||..+++. . .+...+..+.|+| ++
T Consensus 39 ~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~------ 112 (408)
T 4a11_B 39 ERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDT------ 112 (408)
T ss_dssp CCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCT------
T ss_pred eeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCC------
Confidence 356788999999999 999999999999999999988765 1 2566788899999 77
Q ss_pred eeecccEEEEecCCCcEEEEECCCCC---------CCcEEEeCCC
Q 036317 69 VLILRSWVLEGSGDGSVYAWSARSGK---------EPPVIKWAPG 104 (106)
Q Consensus 69 ~~~~~~~i~t~s~d~~i~~wd~~~~~---------~v~~i~~sp~ 104 (106)
+++++++.|+.|++||+++++ .+.++.|+|.
T Consensus 113 -----~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 152 (408)
T 4a11_B 113 -----GMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPV 152 (408)
T ss_dssp -----TCEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSS
T ss_pred -----cEEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecC
Confidence 899999999999999999887 5667777664
No 81
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.44 E-value=1.1e-12 Score=92.95 Aligned_cols=80 Identities=20% Similarity=0.147 Sum_probs=70.3
Q ss_pred CeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce----eccCCCcEEEEEecCCcceeeeeeecccEEEEecCCCcEEEEE
Q 036317 14 DANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSVYAWS 89 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~~wd 89 (106)
.+....|+|+|+++++++.++.+++||..+++. ..+...+..++|+|++ ++|++++.|++|++||
T Consensus 99 ~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-----------~~l~s~s~d~~i~iwd 167 (420)
T 3vl1_A 99 YTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSG-----------EALISSSQDMQLKIWS 167 (420)
T ss_dssp EEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTS-----------SEEEEEETTSEEEEEE
T ss_pred ceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCC-----------CEEEEEeCCCeEEEEe
Confidence 344557899999999999999999999988876 3466778899999999 9999999999999999
Q ss_pred CCCCC----------CCcEEEeCCC
Q 036317 90 ARSGK----------EPPVIKWAPG 104 (106)
Q Consensus 90 ~~~~~----------~v~~i~~sp~ 104 (106)
+++++ .|.+++|+|+
T Consensus 168 ~~~~~~~~~~~~h~~~v~~~~~~~~ 192 (420)
T 3vl1_A 168 VKDGSNPRTLIGHRATVTDIAIIDR 192 (420)
T ss_dssp TTTCCCCEEEECCSSCEEEEEEETT
T ss_pred CCCCcCceEEcCCCCcEEEEEEcCC
Confidence 99887 7888999886
No 82
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.44 E-value=2e-12 Score=102.84 Aligned_cols=89 Identities=12% Similarity=0.187 Sum_probs=77.9
Q ss_pred eecCCCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce----eccCCCcEEEEEec--CCcceeeeeeecccEEEEe
Q 036317 6 FSDGGDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL----PVSHNSTLEASFSQ--HLSLVALSVLILRSWVLEG 79 (106)
Q Consensus 6 ~~~~~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~--d~~~~~~~~~~~~~~i~t~ 79 (106)
..+.+|.+.|.+++|+|||+++++++.|+++++||..+++. ..+...+..+.|+| ++ .++++|
T Consensus 651 ~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~-----------~~l~sg 719 (1249)
T 3sfz_A 651 LDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNH-----------LLLATG 719 (1249)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSC-----------CEEEEE
T ss_pred EEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCc-----------eEEEEE
Confidence 34556778999999999999999999999999999999887 45667788899999 45 689999
Q ss_pred cCCCcEEEEECCCCC----------CCcEEEeCCCC
Q 036317 80 SGDGSVYAWSARSGK----------EPPVIKWAPGS 105 (106)
Q Consensus 80 s~d~~i~~wd~~~~~----------~v~~i~~sp~~ 105 (106)
+.|+.|++||+++++ .|.+++|+|+.
T Consensus 720 ~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~ 755 (1249)
T 3sfz_A 720 SNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDD 755 (1249)
T ss_dssp ETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSST
T ss_pred eCCCeEEEEECCCcchhheecCCCCCEEEEEEecCC
Confidence 999999999999887 78899999863
No 83
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.44 E-value=2.2e-12 Score=89.25 Aligned_cols=75 Identities=20% Similarity=0.213 Sum_probs=66.3
Q ss_pred cCCCCCCeeEEEECC-CCCeEEEEeCCCeEEEEEcCCCce---e----ccCCCcEEEEEecCCcceeeeeeecccEEEEe
Q 036317 8 DGGDVSDANEVKLSN-DGRLMLLTTLEGHIHVLHSFQGTL---P----VSHNSTLEASFSQHLSLVALSVLILRSWVLEG 79 (106)
Q Consensus 8 ~~~~~~~v~~v~~sp-dg~~l~~~~~~~~i~l~d~~~~~~---~----~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~ 79 (106)
+.++...|.+++|+| +++++++++.|+.|++||..+++. . .+...+..+.|+|++ ++++++
T Consensus 111 ~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-----------~~l~~~ 179 (366)
T 3k26_A 111 YVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLG-----------EKIMSC 179 (366)
T ss_dssp EESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTS-----------SEEEEE
T ss_pred ecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCC-----------CEEEEe
Confidence 445677999999999 999999999999999999998876 1 355677889999999 999999
Q ss_pred cCCCcEEEEECCCC
Q 036317 80 SGDGSVYAWSARSG 93 (106)
Q Consensus 80 s~d~~i~~wd~~~~ 93 (106)
+.|+.|++||++++
T Consensus 180 ~~dg~i~i~d~~~~ 193 (366)
T 3k26_A 180 GMDHSLKLWRINSK 193 (366)
T ss_dssp ETTSCEEEEESCSH
T ss_pred cCCCCEEEEECCCC
Confidence 99999999999965
No 84
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.44 E-value=3.4e-12 Score=91.63 Aligned_cols=98 Identities=12% Similarity=0.159 Sum_probs=71.0
Q ss_pred eeecCCCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce----eccCCCcEEEEEecCCcceee-------------
Q 036317 5 IFSDGGDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVAL------------- 67 (106)
Q Consensus 5 ~~~~~~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~------------- 67 (106)
.+++.++...|++|+|+|||+++++++.|++|++||+.+++. ..+...+..+ ++++++++.
T Consensus 140 ~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~--s~~~~~l~sgs~d~~i~~~d~~ 217 (420)
T 4gga_A 140 LLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSL--SWNSYILSSGSRSGHIHHHDVR 217 (420)
T ss_dssp EEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEE--EEETTEEEEEETTSEEEEEETT
T ss_pred EEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEE--eeCCCEEEEEeCCCceeEeeec
Confidence 345566677899999999999999999999999999988875 2233333222 222333331
Q ss_pred -------------------eeeecccEEEEecCCCcEEEEECCCCC--------------CCcEEEeCCC
Q 036317 68 -------------------SVLILRSWVLEGSGDGSVYAWSARSGK--------------EPPVIKWAPG 104 (106)
Q Consensus 68 -------------------~~~~~~~~i~t~s~d~~i~~wd~~~~~--------------~v~~i~~sp~ 104 (106)
.+....+++++++.|+.+++|+..+++ .|.+++|+|.
T Consensus 218 ~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~ 287 (420)
T 4gga_A 218 VAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPW 287 (420)
T ss_dssp SSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTT
T ss_pred ccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCC
Confidence 112222889999999999999998775 6788888885
No 85
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.43 E-value=3.7e-12 Score=88.02 Aligned_cols=80 Identities=15% Similarity=0.186 Sum_probs=71.4
Q ss_pred CeeEEEECCCCCeEEEEeCCCeEEEEEcCC-Cce----eccCCCcEEEEEecCCcceeeeeeecccEEEEecCCCcEEEE
Q 036317 14 DANEVKLSNDGRLMLLTTLEGHIHVLHSFQ-GTL----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSVYAW 88 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~~~~~~~i~l~d~~~-~~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~~w 88 (106)
.+.+++|+|+++++++++.++.+++||..+ ++. ..+...+..+.|+|++ +++++++.|+.|++|
T Consensus 177 ~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~-----------~~l~~~~~d~~i~v~ 245 (369)
T 3zwl_B 177 AATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDL-----------TYFITSSRDTNSFLV 245 (369)
T ss_dssp CEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTS-----------SEEEEEETTSEEEEE
T ss_pred ceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCC-----------CEEEEecCCceEEEE
Confidence 899999999999999999999999999988 444 4466678889999999 999999999999999
Q ss_pred ECCCCC---------CCcEEEeCCC
Q 036317 89 SARSGK---------EPPVIKWAPG 104 (106)
Q Consensus 89 d~~~~~---------~v~~i~~sp~ 104 (106)
|+++++ .+.++.|+|.
T Consensus 246 d~~~~~~~~~~~~~~~~~~~~~~~~ 270 (369)
T 3zwl_B 246 DVSTLQVLKKYETDCPLNTAVITPL 270 (369)
T ss_dssp ETTTCCEEEEEECSSCEEEEEECSS
T ss_pred ECCCCceeeeecCCCCceeEEecCC
Confidence 999987 6778888875
No 86
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.43 E-value=6.1e-13 Score=99.67 Aligned_cols=86 Identities=12% Similarity=0.046 Sum_probs=72.3
Q ss_pred cCCCCCCeeEE--EECCCC-CeEEEEeCCCeEEEEEcCCCce----eccC--CCcEEEEEecCCcceeeeeeecccEEEE
Q 036317 8 DGGDVSDANEV--KLSNDG-RLMLLTTLEGHIHVLHSFQGTL----PVSH--NSTLEASFSQHLSLVALSVLILRSWVLE 78 (106)
Q Consensus 8 ~~~~~~~v~~v--~~spdg-~~l~~~~~~~~i~l~d~~~~~~----~~~~--~~~~~~~fs~d~~~~~~~~~~~~~~i~t 78 (106)
+.+|.+.|.++ .|+|+| +++++++.|++++|||+.+++. ..+. ..+..++|+|++ +.+++
T Consensus 304 ~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~-----------~~l~s 372 (524)
T 2j04_B 304 DQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQI-----------YSYIY 372 (524)
T ss_dssp EECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTT-----------TEEEE
T ss_pred eecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCc-----------CeEEE
Confidence 45667799999 678998 8899999999999999987764 2222 235679999999 99999
Q ss_pred ecCCCcEEEEECCCCC----------CCcEEEeCCC
Q 036317 79 GSGDGSVYAWSARSGK----------EPPVIKWAPG 104 (106)
Q Consensus 79 ~s~d~~i~~wd~~~~~----------~v~~i~~sp~ 104 (106)
++.|++|++||+++++ .|.+++|+|+
T Consensus 373 ~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~ 408 (524)
T 2j04_B 373 SDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRL 408 (524)
T ss_dssp ECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSS
T ss_pred eCCCCcEEEEECcccccceeeecCCCceEEEEeCCC
Confidence 9999999999999876 7899999996
No 87
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.43 E-value=2.4e-12 Score=87.45 Aligned_cols=81 Identities=12% Similarity=0.211 Sum_probs=72.1
Q ss_pred CCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce----eccCCCcEEEEEecCCcceeeeeeecccEEEEecCCCcEE
Q 036317 11 DVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSVY 86 (106)
Q Consensus 11 ~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~ 86 (106)
+...+.+++|+|+++ +++++.++.+++||..+++. ..+...+..+.|+|++ + +++++.|+.|+
T Consensus 183 ~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-----------~-l~~~~~dg~v~ 249 (313)
T 3odt_A 183 HNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-----------D-IVSCGEDRTVR 249 (313)
T ss_dssp CSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-----------C-EEEEETTSEEE
T ss_pred CcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-----------C-EEEEecCCEEE
Confidence 566899999999999 99999999999999998877 4466778899999999 7 77889999999
Q ss_pred EEECCCCC----------CCcEEEeCCC
Q 036317 87 AWSARSGK----------EPPVIKWAPG 104 (106)
Q Consensus 87 ~wd~~~~~----------~v~~i~~sp~ 104 (106)
+||+++++ .+.+++|+|+
T Consensus 250 iwd~~~~~~~~~~~~~~~~i~~~~~~~~ 277 (313)
T 3odt_A 250 IWSKENGSLKQVITLPAISIWSVDCMSN 277 (313)
T ss_dssp EECTTTCCEEEEEECSSSCEEEEEECTT
T ss_pred EEECCCCceeEEEeccCceEEEEEEccC
Confidence 99999987 7888999886
No 88
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.43 E-value=1.3e-12 Score=91.96 Aligned_cols=72 Identities=19% Similarity=0.299 Sum_probs=65.0
Q ss_pred CCCeeEEEECCCCCeEEEEeCC---CeEEEEEcCCCce----ec-------------cCCCcEEEEEecCCcceeeeeee
Q 036317 12 VSDANEVKLSNDGRLMLLTTLE---GHIHVLHSFQGTL----PV-------------SHNSTLEASFSQHLSLVALSVLI 71 (106)
Q Consensus 12 ~~~v~~v~~spdg~~l~~~~~~---~~i~l~d~~~~~~----~~-------------~~~~~~~~~fs~d~~~~~~~~~~ 71 (106)
...|.+++|+|+++++++++.+ +.+++||..+++. .. +...+..+.|+|++
T Consensus 233 ~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--------- 303 (397)
T 1sq9_A 233 SNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSG--------- 303 (397)
T ss_dssp CCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSS---------
T ss_pred CCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCC---------
Confidence 6799999999999999999999 9999999998876 33 56678889999999
Q ss_pred cccEEEEecCCCcEEEEECCCCC
Q 036317 72 LRSWVLEGSGDGSVYAWSARSGK 94 (106)
Q Consensus 72 ~~~~i~t~s~d~~i~~wd~~~~~ 94 (106)
++|++++.|+.|++||+++++
T Consensus 304 --~~l~~~~~dg~i~iwd~~~~~ 324 (397)
T 1sq9_A 304 --ETLCSAGWDGKLRFWDVKTKE 324 (397)
T ss_dssp --SEEEEEETTSEEEEEETTTTE
T ss_pred --CEEEEEeCCCeEEEEEcCCCc
Confidence 999999999999999998765
No 89
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.43 E-value=1.1e-12 Score=92.19 Aligned_cols=72 Identities=13% Similarity=0.276 Sum_probs=63.4
Q ss_pred CCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce----eccCCCcEEEEEecCCcceeeeeeecccEEEEecCCCcEE
Q 036317 11 DVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSVY 86 (106)
Q Consensus 11 ~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~ 86 (106)
+.+.|.+++|+|+|+++++++.++.+++|| .+++. ..+...+..+.|+|++ +++++++.|+.|+
T Consensus 107 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~-----------~~l~~~~~d~~i~ 174 (425)
T 1r5m_A 107 TTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDG-----------THIISMDVENVTI 174 (425)
T ss_dssp -CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTS-----------SEEEEEETTCCEE
T ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCC-----------CEEEEEecCCeEE
Confidence 455999999999999999999999999999 45554 4466678899999999 9999999999999
Q ss_pred EEECCCCC
Q 036317 87 AWSARSGK 94 (106)
Q Consensus 87 ~wd~~~~~ 94 (106)
+||+++++
T Consensus 175 iwd~~~~~ 182 (425)
T 1r5m_A 175 LWNVISGT 182 (425)
T ss_dssp EEETTTTE
T ss_pred EEECCCCc
Confidence 99999887
No 90
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.42 E-value=1.6e-12 Score=91.43 Aligned_cols=82 Identities=11% Similarity=0.248 Sum_probs=66.8
Q ss_pred CCCCeeEEEECCCCC-eEEEEeCCCeEEEEEc----CCCc------e----ec----------cCCCcEEEEEecCCcce
Q 036317 11 DVSDANEVKLSNDGR-LMLLTTLEGHIHVLHS----FQGT------L----PV----------SHNSTLEASFSQHLSLV 65 (106)
Q Consensus 11 ~~~~v~~v~~spdg~-~l~~~~~~~~i~l~d~----~~~~------~----~~----------~~~~~~~~~fs~d~~~~ 65 (106)
+.+.|.+++|+|+|+ ++++++.|+.+++||. .+++ . .. +.+.+..+.|+|++
T Consensus 44 ~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~--- 120 (425)
T 1r5m_A 44 KLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDG--- 120 (425)
T ss_dssp ECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTS---
T ss_pred ccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCC---
Confidence 346899999999999 9999999999999999 8877 2 11 23477889999999
Q ss_pred eeeeeecccEEEEecCCCcEEEEECCCCC----------CCcEEEeCCC
Q 036317 66 ALSVLILRSWVLEGSGDGSVYAWSARSGK----------EPPVIKWAPG 104 (106)
Q Consensus 66 ~~~~~~~~~~i~t~s~d~~i~~wd~~~~~----------~v~~i~~sp~ 104 (106)
++|++++.|+.|++|| .+++ .|.+++|+|+
T Consensus 121 --------~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~ 160 (425)
T 1r5m_A 121 --------NSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKD 160 (425)
T ss_dssp --------SEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTT
T ss_pred --------CEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCC
Confidence 9999999999999999 4444 7899999986
No 91
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.42 E-value=2.4e-12 Score=91.80 Aligned_cols=88 Identities=14% Similarity=0.247 Sum_probs=73.7
Q ss_pred cCCCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce----eccCCCcEEEEEecCCcceeeeeeecccEEEEec--C
Q 036317 8 DGGDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGS--G 81 (106)
Q Consensus 8 ~~~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s--~ 81 (106)
+.++.+.|.+++|+|+++++++++.|+.+++||..+++. ..+...+..++|+|++ ...+++++ .
T Consensus 213 ~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~----------~~ll~~~~gs~ 282 (401)
T 4aez_A 213 LQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQ----------SNLLATGGGTM 282 (401)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTS----------TTEEEEECCTT
T ss_pred EcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCC----------CCEEEEecCCC
Confidence 345677999999999999999999999999999998776 3456677889999987 24556654 7
Q ss_pred CCcEEEEECCCCC---------CCcEEEeCCCC
Q 036317 82 DGSVYAWSARSGK---------EPPVIKWAPGS 105 (106)
Q Consensus 82 d~~i~~wd~~~~~---------~v~~i~~sp~~ 105 (106)
|+.|++||+++++ .+.+++|+|+.
T Consensus 283 d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~ 315 (401)
T 4aez_A 283 DKQIHFWNAATGARVNTVDAGSQVTSLIWSPHS 315 (401)
T ss_dssp TCEEEEEETTTCCEEEEEECSSCEEEEEECSSS
T ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEEEECCCC
Confidence 9999999999987 78899998863
No 92
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.42 E-value=1.5e-12 Score=91.99 Aligned_cols=82 Identities=15% Similarity=0.143 Sum_probs=71.6
Q ss_pred CCCeeEEEECCCC-CeEEEEeCCC---eEEEEEcCCCc-e----e-ccCCCcEEEEEec-CCcceeeeeeecccEEEEec
Q 036317 12 VSDANEVKLSNDG-RLMLLTTLEG---HIHVLHSFQGT-L----P-VSHNSTLEASFSQ-HLSLVALSVLILRSWVLEGS 80 (106)
Q Consensus 12 ~~~v~~v~~spdg-~~l~~~~~~~---~i~l~d~~~~~-~----~-~~~~~~~~~~fs~-d~~~~~~~~~~~~~~i~t~s 80 (106)
...|.+++|+|++ .++++++.++ .+++||..++. . . .+...+..++|+| ++ +++++++
T Consensus 214 ~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-----------~~l~s~~ 282 (416)
T 2pm9_A 214 KQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDE-----------HLLLSSG 282 (416)
T ss_dssp CCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCS-----------SCEEEEE
T ss_pred CCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCC-----------CeEEEEe
Confidence 5689999999997 5788888888 99999998863 2 3 4666788999999 89 9999999
Q ss_pred CCCcEEEEECCCCC----------CCcEEEeCCC
Q 036317 81 GDGSVYAWSARSGK----------EPPVIKWAPG 104 (106)
Q Consensus 81 ~d~~i~~wd~~~~~----------~v~~i~~sp~ 104 (106)
.|+.|++||+++++ .|.+++|+|+
T Consensus 283 ~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~ 316 (416)
T 2pm9_A 283 RDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPE 316 (416)
T ss_dssp SSSEEEEECSSSCCEEEEEECSSSCCCCEEECTT
T ss_pred CCCCEEEeeCCCCccceeecCCCCceEEEEECCC
Confidence 99999999999887 7889999985
No 93
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.41 E-value=2.7e-13 Score=97.09 Aligned_cols=79 Identities=9% Similarity=0.126 Sum_probs=64.9
Q ss_pred eeEEEECCCCCeEEEEeCCCeEEEEEcCCCce---------eccCCCcEEEEEec--------CCcceeeeeeecccEEE
Q 036317 15 ANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL---------PVSHNSTLEASFSQ--------HLSLVALSVLILRSWVL 77 (106)
Q Consensus 15 v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~---------~~~~~~~~~~~fs~--------d~~~~~~~~~~~~~~i~ 77 (106)
.....++++++++++++.|++++|||..+++. .+|.+.+.+++|+| |+ ++|+
T Consensus 92 ~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~-----------~~la 160 (393)
T 4gq1_A 92 GNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAE-----------QVIA 160 (393)
T ss_dssp -----CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEE-----------EEEE
T ss_pred cceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCC-----------CEEE
Confidence 33445566778899999999999999988754 35778889999998 88 9999
Q ss_pred EecCCCcEEEEECCCCC----------CCcEEEeCCC
Q 036317 78 EGSGDGSVYAWSARSGK----------EPPVIKWAPG 104 (106)
Q Consensus 78 t~s~d~~i~~wd~~~~~----------~v~~i~~sp~ 104 (106)
+++.|++|+|||++++. .+.+++|+|.
T Consensus 161 s~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~ 197 (393)
T 4gq1_A 161 SVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPS 197 (393)
T ss_dssp EEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETT
T ss_pred EEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCC
Confidence 99999999999998765 8889999985
No 94
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.41 E-value=3.1e-13 Score=98.71 Aligned_cols=81 Identities=14% Similarity=0.112 Sum_probs=68.8
Q ss_pred CCeeEEEECCCCCeEE----EEeCCCeEEEEEcCCC--------c----e---eccCCCcEEEEEecC-Ccceeeeeeec
Q 036317 13 SDANEVKLSNDGRLML----LTTLEGHIHVLHSFQG--------T----L---PVSHNSTLEASFSQH-LSLVALSVLIL 72 (106)
Q Consensus 13 ~~v~~v~~spdg~~l~----~~~~~~~i~l~d~~~~--------~----~---~~~~~~~~~~~fs~d-~~~~~~~~~~~ 72 (106)
+.|.+++|+|+|++++ +++.|+.+++||+.++ + . ..|...+..++|+|+ +
T Consensus 93 ~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~---------- 162 (434)
T 2oit_A 93 FPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVP---------- 162 (434)
T ss_dssp SCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCT----------
T ss_pred CcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCC----------
Confidence 4699999999999999 6778999999998654 1 1 234567889999998 7
Q ss_pred ccEEEEecCCCcEEEEECCCCC----------CCcEEEeCCC
Q 036317 73 RSWVLEGSGDGSVYAWSARSGK----------EPPVIKWAPG 104 (106)
Q Consensus 73 ~~~i~t~s~d~~i~~wd~~~~~----------~v~~i~~sp~ 104 (106)
..+++++.|++|++||+++++ .+.+++|+|+
T Consensus 163 -~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspd 203 (434)
T 2oit_A 163 -SMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPK 203 (434)
T ss_dssp -TEEEEEETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTT
T ss_pred -CEEEEEECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCC
Confidence 899999999999999999874 7899999986
No 95
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.41 E-value=2.4e-12 Score=90.85 Aligned_cols=88 Identities=15% Similarity=0.235 Sum_probs=75.0
Q ss_pred eecCCCCCCeeEEEECCC-CCeEEEEeCCCeEEEEEcCCCc------e-------eccCCCcEEEEEecC-Ccceeeeee
Q 036317 6 FSDGGDVSDANEVKLSND-GRLMLLTTLEGHIHVLHSFQGT------L-------PVSHNSTLEASFSQH-LSLVALSVL 70 (106)
Q Consensus 6 ~~~~~~~~~v~~v~~spd-g~~l~~~~~~~~i~l~d~~~~~------~-------~~~~~~~~~~~fs~d-~~~~~~~~~ 70 (106)
..+.+|.+.|.+++|+|+ ++++++++.|+.|++||..+++ . ..+...+..+.|+|+ +
T Consensus 107 ~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-------- 178 (416)
T 2pm9_A 107 ARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLA-------- 178 (416)
T ss_dssp EECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCT--------
T ss_pred hhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCC--------
Confidence 445567789999999998 8999999999999999998876 2 235567788999999 7
Q ss_pred ecccEEEEecCCCcEEEEECCCCC----------------CCcEEEeCCC
Q 036317 71 ILRSWVLEGSGDGSVYAWSARSGK----------------EPPVIKWAPG 104 (106)
Q Consensus 71 ~~~~~i~t~s~d~~i~~wd~~~~~----------------~v~~i~~sp~ 104 (106)
.++++++.|+.|++||+++++ .+.+++|+|+
T Consensus 179 ---~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 225 (416)
T 2pm9_A 179 ---HVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPK 225 (416)
T ss_dssp ---TEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSS
T ss_pred ---cEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCC
Confidence 899999999999999999865 4788899886
No 96
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.41 E-value=5.1e-12 Score=89.02 Aligned_cols=78 Identities=8% Similarity=0.101 Sum_probs=67.4
Q ss_pred ecCCCCCCeeEEEECCCCC-eEEEEeCCCeEEEEEcCC----Cce---eccCCCcEEEEEec-CCcceeeeeeecccEEE
Q 036317 7 SDGGDVSDANEVKLSNDGR-LMLLTTLEGHIHVLHSFQ----GTL---PVSHNSTLEASFSQ-HLSLVALSVLILRSWVL 77 (106)
Q Consensus 7 ~~~~~~~~v~~v~~spdg~-~l~~~~~~~~i~l~d~~~----~~~---~~~~~~~~~~~fs~-d~~~~~~~~~~~~~~i~ 77 (106)
.+.++.+.|.+++|+|+++ ++++++.|+.+++||..+ +.. ..+...+..+.|+| ++ ++|+
T Consensus 199 ~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-----------~~l~ 267 (383)
T 3ei3_B 199 KEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDS-----------TKLL 267 (383)
T ss_dssp EEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTS-----------CEEE
T ss_pred EeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCC-----------CEEE
Confidence 3445678999999999999 899999999999999987 333 34666788999999 99 9999
Q ss_pred EecCCCcEEEEECCCCCC
Q 036317 78 EGSGDGSVYAWSARSGKE 95 (106)
Q Consensus 78 t~s~d~~i~~wd~~~~~~ 95 (106)
+++.|+.|++||+++++.
T Consensus 268 ~~~~d~~i~iwd~~~~~~ 285 (383)
T 3ei3_B 268 TTDQRNEIRVYSSYDWSK 285 (383)
T ss_dssp EEESSSEEEEEETTBTTS
T ss_pred EEcCCCcEEEEECCCCcc
Confidence 999999999999998873
No 97
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.40 E-value=9.6e-13 Score=94.18 Aligned_cols=72 Identities=10% Similarity=0.157 Sum_probs=63.7
Q ss_pred CCCCCCeeEEEECC-CCCeEEEEeCCCeEEEEEcCC---Cce------eccCCCcEEEEEecCCcceeeeeeecccEEEE
Q 036317 9 GGDVSDANEVKLSN-DGRLMLLTTLEGHIHVLHSFQ---GTL------PVSHNSTLEASFSQHLSLVALSVLILRSWVLE 78 (106)
Q Consensus 9 ~~~~~~v~~v~~sp-dg~~l~~~~~~~~i~l~d~~~---~~~------~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t 78 (106)
.+|.+.|++++|+| +|+++++++.|+.|++||..+ +.. ..+...+.+++|+|++ +++++
T Consensus 60 ~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-----------~~l~s 128 (437)
T 3gre_A 60 ENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNF-----------DAFAV 128 (437)
T ss_dssp TTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTS-----------SEEEE
T ss_pred cCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCC-----------CEEEE
Confidence 56778999999999 999999999999999999876 432 2466778899999999 99999
Q ss_pred ecCCCcEEEEECC
Q 036317 79 GSGDGSVYAWSAR 91 (106)
Q Consensus 79 ~s~d~~i~~wd~~ 91 (106)
++.|++|++||++
T Consensus 129 ~s~dg~i~vwd~~ 141 (437)
T 3gre_A 129 SSKDGQIIVLKVN 141 (437)
T ss_dssp EETTSEEEEEEEE
T ss_pred EeCCCEEEEEEec
Confidence 9999999999995
No 98
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.39 E-value=1.2e-12 Score=95.68 Aligned_cols=72 Identities=14% Similarity=0.128 Sum_probs=63.3
Q ss_pred CCCCCCeeEEEECCC-CCeEEEEeCCCeEEEEEcCCCce----eccCCCcEEEEEecCCcceeeeeeecccEEEEecCCC
Q 036317 9 GGDVSDANEVKLSND-GRLMLLTTLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDG 83 (106)
Q Consensus 9 ~~~~~~v~~v~~spd-g~~l~~~~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~ 83 (106)
.+|.+.|.+++|+|+ ++++++++.|+++++||+.++.. ..+...+.+++|+|+| ++|++|+.|+
T Consensus 146 ~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg-----------~~lasgs~dg 214 (434)
T 2oit_A 146 KDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKG-----------KQLAVGKQNG 214 (434)
T ss_dssp CSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTS-----------SCEEEEETTS
T ss_pred CCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCC-----------CEEEEEcCCC
Confidence 345679999999998 88899999999999999988755 2345578889999999 9999999999
Q ss_pred cEEEEECC
Q 036317 84 SVYAWSAR 91 (106)
Q Consensus 84 ~i~~wd~~ 91 (106)
+|++||++
T Consensus 215 ~v~iwd~~ 222 (434)
T 2oit_A 215 TVVQYLPT 222 (434)
T ss_dssp CEEEECTT
T ss_pred cEEEEccC
Confidence 99999998
No 99
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.39 E-value=3.7e-12 Score=100.33 Aligned_cols=82 Identities=18% Similarity=0.373 Sum_probs=72.2
Q ss_pred CCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce---eccCCCcEEEEEecCCcceeeeeeecccEEEEecCCCcEEE
Q 036317 11 DVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL---PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSVYA 87 (106)
Q Consensus 11 ~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~---~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~~ 87 (106)
+...|.+++|+| |+++++++.|++|++||+.+++. ..+.+.+..++|+|++ +++++|+.||+|++
T Consensus 57 ~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~~~~~V~~v~~sp~g-----------~~l~sgs~dg~V~l 124 (902)
T 2oaj_A 57 DRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVFVPGKITSIDTDASL-----------DWMLIGLQNGSMIV 124 (902)
T ss_dssp SCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEECSSCEEEEECCTTC-----------SEEEEEETTSCEEE
T ss_pred CCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEcCCCCEEEEEECCCC-----------CEEEEEcCCCcEEE
Confidence 456899999999 88999999999999999998876 3355678899999999 99999999999999
Q ss_pred EECCCCC---------------------CCcEEEeCCC
Q 036317 88 WSARSGK---------------------EPPVIKWAPG 104 (106)
Q Consensus 88 wd~~~~~---------------------~v~~i~~sp~ 104 (106)
||+++++ .|.+++|+|+
T Consensus 125 wd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~ 162 (902)
T 2oaj_A 125 YDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPR 162 (902)
T ss_dssp EETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETT
T ss_pred EECCCCccccceeccccccccccccCCCCeEEEEEccC
Confidence 9997643 6889999985
No 100
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.39 E-value=3.9e-12 Score=89.41 Aligned_cols=83 Identities=10% Similarity=0.057 Sum_probs=65.3
Q ss_pred CCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce----e------cc---------------CCCcEEEEEecCCcce
Q 036317 11 DVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL----P------VS---------------HNSTLEASFSQHLSLV 65 (106)
Q Consensus 11 ~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~----~------~~---------------~~~~~~~~fs~d~~~~ 65 (106)
+...|.+++|+|+|+++++++.|+.+++||+.+++. . .+ ...+..++|+|+++++
T Consensus 290 ~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~ 369 (397)
T 1sq9_A 290 HSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRS 369 (397)
T ss_dssp BSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSB
T ss_pred cCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccc
Confidence 667999999999999999999999999999998876 3 34 5677889999998222
Q ss_pred eeeeeecccEEEEecCCCcEEEEECCCCC
Q 036317 66 ALSVLILRSWVLEGSGDGSVYAWSARSGK 94 (106)
Q Consensus 66 ~~~~~~~~~~i~t~s~d~~i~~wd~~~~~ 94 (106)
+..-.. .++|++++.|+.|++||+++|+
T Consensus 370 ~~~~~~-~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 370 GMGADL-NESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp STTCTT-SCEEEEEETTTEEEEEEEEC--
T ss_pred cccccc-cceEEEecCCCcEEEEEcCCCC
Confidence 211100 0389999999999999999875
No 101
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.38 E-value=4.1e-12 Score=90.55 Aligned_cols=69 Identities=19% Similarity=0.241 Sum_probs=57.6
Q ss_pred CeeEEEECCCCCeEEEEeCCCeEEEEEcCC-Cce----eccCC---------------CcEEEEEecCCcceeeeeeecc
Q 036317 14 DANEVKLSNDGRLMLLTTLEGHIHVLHSFQ-GTL----PVSHN---------------STLEASFSQHLSLVALSVLILR 73 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~~~~~~~i~l~d~~~-~~~----~~~~~---------------~~~~~~fs~d~~~~~~~~~~~~ 73 (106)
.|.+++|+|+|+++++++. +.+++||..+ ++. ..+.. ....++|+|++
T Consensus 287 ~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~----------- 354 (447)
T 3dw8_B 287 SISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSD----------- 354 (447)
T ss_dssp CEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTS-----------
T ss_pred eEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccccceEEEECCCC-----------
Confidence 8999999999999999998 9999999986 554 22211 02238999999
Q ss_pred cEEEEecCCCcEEEEECCCCC
Q 036317 74 SWVLEGSGDGSVYAWSARSGK 94 (106)
Q Consensus 74 ~~i~t~s~d~~i~~wd~~~~~ 94 (106)
++|++|+.|+.|++||+++++
T Consensus 355 ~~l~s~s~dg~v~iwd~~~~~ 375 (447)
T 3dw8_B 355 SVVMTGSYNNFFRMFDRNTKR 375 (447)
T ss_dssp SEEEEECSTTEEEEEETTTCC
T ss_pred CEEEEeccCCEEEEEEcCCCc
Confidence 999999999999999998775
No 102
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.37 E-value=3.9e-12 Score=87.86 Aligned_cols=83 Identities=13% Similarity=0.132 Sum_probs=68.5
Q ss_pred CCCCCCeeEEEECCCCCeEEEEe-C---CCeEEEEEcCCCce-----eccCCCcEEEEEecC---CcceeeeeeecccEE
Q 036317 9 GGDVSDANEVKLSNDGRLMLLTT-L---EGHIHVLHSFQGTL-----PVSHNSTLEASFSQH---LSLVALSVLILRSWV 76 (106)
Q Consensus 9 ~~~~~~v~~v~~spdg~~l~~~~-~---~~~i~l~d~~~~~~-----~~~~~~~~~~~fs~d---~~~~~~~~~~~~~~i 76 (106)
.+|...|.+++|+|+++.+++++ . |+.+++||..+++. ..+...+..++|+|+ + +++
T Consensus 15 ~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-----------~~l 83 (357)
T 3i2n_A 15 KGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQ-----------RYL 83 (357)
T ss_dssp EECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTT-----------CCE
T ss_pred cCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCC-----------ceE
Confidence 46778999999999997676544 4 89999999998876 246667889999998 8 999
Q ss_pred EEecCCCcEEEEECCCCC-----------CCcEEEeC
Q 036317 77 LEGSGDGSVYAWSARSGK-----------EPPVIKWA 102 (106)
Q Consensus 77 ~t~s~d~~i~~wd~~~~~-----------~v~~i~~s 102 (106)
++++.|+.|++||+++++ .|.+++|.
T Consensus 84 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~ 120 (357)
T 3i2n_A 84 ATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGI 120 (357)
T ss_dssp EEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEE
T ss_pred EEecCCCeEEEEeCCCCCccEEEEEecccceEEEeec
Confidence 999999999999999775 66777553
No 103
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.37 E-value=6.9e-12 Score=89.70 Aligned_cols=83 Identities=10% Similarity=0.092 Sum_probs=70.3
Q ss_pred CCCeeEEE--ECCCCCeEEEEeCCCeEEEEEcCCCce----ec--cCCCcEEEEEecCCcceeeeeeecccEEEEecCCC
Q 036317 12 VSDANEVK--LSNDGRLMLLTTLEGHIHVLHSFQGTL----PV--SHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDG 83 (106)
Q Consensus 12 ~~~v~~v~--~spdg~~l~~~~~~~~i~l~d~~~~~~----~~--~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~ 83 (106)
...+.++. ++|+++++++++.|+.|++||..+++. .. +...+..++|+|++ +++++|+.|+
T Consensus 168 ~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~-----------~~l~s~~~dg 236 (437)
T 3gre_A 168 NEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEEC-----------CVLILGTTRG 236 (437)
T ss_dssp CCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTS-----------CEEEEEETTS
T ss_pred ccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCC-----------CEEEEEcCCC
Confidence 44566666 668999999999999999999998876 33 56788899999999 9999999999
Q ss_pred cEEEEECCCCC-----------CCcEEEeCCCC
Q 036317 84 SVYAWSARSGK-----------EPPVIKWAPGS 105 (106)
Q Consensus 84 ~i~~wd~~~~~-----------~v~~i~~sp~~ 105 (106)
+|++||+++++ .|.+++|+|.+
T Consensus 237 ~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~ 269 (437)
T 3gre_A 237 IIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFY 269 (437)
T ss_dssp CEEEEETTTTEEEEEEBCTTCEEEEEEEECTTT
T ss_pred eEEEEEcCCccEEEEEecCCCCceEEEEecccc
Confidence 99999999876 57788777753
No 104
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.37 E-value=6.9e-12 Score=96.69 Aligned_cols=87 Identities=18% Similarity=0.289 Sum_probs=76.6
Q ss_pred ecCCCCCCeeEEEECCC--CCeEEEEeCCCeEEEEEcCCCce------eccCCCcEEEEEecC--CcceeeeeeecccEE
Q 036317 7 SDGGDVSDANEVKLSND--GRLMLLTTLEGHIHVLHSFQGTL------PVSHNSTLEASFSQH--LSLVALSVLILRSWV 76 (106)
Q Consensus 7 ~~~~~~~~v~~v~~spd--g~~l~~~~~~~~i~l~d~~~~~~------~~~~~~~~~~~fs~d--~~~~~~~~~~~~~~i 76 (106)
.+.+|.+.|.+++|+|+ |+++++++.|+.|++||..+++. ..+...+..+.|+|+ + +++
T Consensus 48 ~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~-----------~~l 116 (753)
T 3jro_A 48 TLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYG-----------PLL 116 (753)
T ss_dssp EECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGC-----------SEE
T ss_pred eccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCC-----------CEE
Confidence 44577889999999998 99999999999999999998863 346667889999999 9 999
Q ss_pred EEecCCCcEEEEECCCCC------------CCcEEEeCCC
Q 036317 77 LEGSGDGSVYAWSARSGK------------EPPVIKWAPG 104 (106)
Q Consensus 77 ~t~s~d~~i~~wd~~~~~------------~v~~i~~sp~ 104 (106)
++|+.||.|++||++++. .|.++.|+|.
T Consensus 117 ~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~ 156 (753)
T 3jro_A 117 LVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPA 156 (753)
T ss_dssp EEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCC
T ss_pred EEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCc
Confidence 999999999999999873 7889999984
No 105
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.37 E-value=1.5e-11 Score=88.79 Aligned_cols=85 Identities=18% Similarity=0.223 Sum_probs=71.8
Q ss_pred CCCCCCeeEEEECC-CCCeEEEEeCCCeEEEEEcCCCc---e----eccCCCcEEEEEecCCcceeeeeeeccc-EEEEe
Q 036317 9 GGDVSDANEVKLSN-DGRLMLLTTLEGHIHVLHSFQGT---L----PVSHNSTLEASFSQHLSLVALSVLILRS-WVLEG 79 (106)
Q Consensus 9 ~~~~~~v~~v~~sp-dg~~l~~~~~~~~i~l~d~~~~~---~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~-~i~t~ 79 (106)
.++...|.+++|+| ++..+++++.++.|++||..++. . ..+...+..++|+|++ + .+++|
T Consensus 228 ~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~-----------~~~l~tg 296 (430)
T 2xyi_A 228 TGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYS-----------EFILATG 296 (430)
T ss_dssp CCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSC-----------TTEEEEE
T ss_pred cCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCC-----------CCEEEEE
Confidence 35667899999999 67788899999999999998763 2 3456677889999998 7 68899
Q ss_pred cCCCcEEEEECCCCC-----------CCcEEEeCCC
Q 036317 80 SGDGSVYAWSARSGK-----------EPPVIKWAPG 104 (106)
Q Consensus 80 s~d~~i~~wd~~~~~-----------~v~~i~~sp~ 104 (106)
+.|++|++||+++.+ .|.+++|+|.
T Consensus 297 ~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~ 332 (430)
T 2xyi_A 297 SADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPH 332 (430)
T ss_dssp ETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSS
T ss_pred eCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCC
Confidence 999999999999743 7889999985
No 106
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.37 E-value=6.1e-12 Score=91.02 Aligned_cols=83 Identities=12% Similarity=0.050 Sum_probs=70.4
Q ss_pred CCCCeeEEEECCCCCeE-EEEeCCCeEEEEEcC--CCce----e--ccCCCcEEEEEecCCcceeeeeeecccEEEEecC
Q 036317 11 DVSDANEVKLSNDGRLM-LLTTLEGHIHVLHSF--QGTL----P--VSHNSTLEASFSQHLSLVALSVLILRSWVLEGSG 81 (106)
Q Consensus 11 ~~~~v~~v~~spdg~~l-~~~~~~~~i~l~d~~--~~~~----~--~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~ 81 (106)
+.+.|.+++|+|+|+++ ++++.|+.+++||.. +++. . .+...+..++|+|++ ++|++++.
T Consensus 101 ~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~-----------~~l~~~~~ 169 (450)
T 2vdu_B 101 IYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDD-----------TTVIIADK 169 (450)
T ss_dssp CCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTS-----------SEEEEEET
T ss_pred cCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCC-----------CEEEEEeC
Confidence 34579999999999996 788899999999998 6665 1 344677889999999 99999999
Q ss_pred CCcEEEEECCCCC--------------CCcEEEeCCC
Q 036317 82 DGSVYAWSARSGK--------------EPPVIKWAPG 104 (106)
Q Consensus 82 d~~i~~wd~~~~~--------------~v~~i~~sp~ 104 (106)
++.+++|++.+++ .|.+++|+|+
T Consensus 170 ~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~ 206 (450)
T 2vdu_B 170 FGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKD 206 (450)
T ss_dssp TSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEEC
T ss_pred CCcEEEEecCCcccccccceeeecccCceEEEEEcCC
Confidence 9999999987654 6788999886
No 107
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.36 E-value=4.6e-12 Score=87.48 Aligned_cols=73 Identities=14% Similarity=0.216 Sum_probs=63.7
Q ss_pred CCCCCeeEEEECC---CCCeEEEEeCCCeEEEEEcCCCce----e-----ccCCCcEEEEEecCCcceeeeeeeccc-EE
Q 036317 10 GDVSDANEVKLSN---DGRLMLLTTLEGHIHVLHSFQGTL----P-----VSHNSTLEASFSQHLSLVALSVLILRS-WV 76 (106)
Q Consensus 10 ~~~~~v~~v~~sp---dg~~l~~~~~~~~i~l~d~~~~~~----~-----~~~~~~~~~~fs~d~~~~~~~~~~~~~-~i 76 (106)
.+...|.+++|+| +++++++++.++.+++||..+++. . .+...+..+.|+|++ + ++
T Consensus 207 ~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-----------~~~l 275 (357)
T 3i2n_A 207 NIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQN-----------RELF 275 (357)
T ss_dssp ECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTE-----------EEEE
T ss_pred CCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCC-----------CcEE
Confidence 3456899999999 999999999999999999887654 2 566778889999999 8 89
Q ss_pred EEecCCCcEEEEECCCC
Q 036317 77 LEGSGDGSVYAWSARSG 93 (106)
Q Consensus 77 ~t~s~d~~i~~wd~~~~ 93 (106)
++++.|+.|++||++++
T Consensus 276 ~~~~~dg~i~iwd~~~~ 292 (357)
T 3i2n_A 276 LTAGGAGGLHLWKYEYP 292 (357)
T ss_dssp EEEETTSEEEEEEEECC
T ss_pred EEEeCCCcEEEeecCCC
Confidence 99999999999999853
No 108
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.36 E-value=7.6e-12 Score=89.16 Aligned_cols=75 Identities=12% Similarity=0.165 Sum_probs=63.6
Q ss_pred cCCCCCCeeEEEECCCC-CeEEEEeCCCeEEEEEcCCCce--------eccCC------------CcEEEEEecCCccee
Q 036317 8 DGGDVSDANEVKLSNDG-RLMLLTTLEGHIHVLHSFQGTL--------PVSHN------------STLEASFSQHLSLVA 66 (106)
Q Consensus 8 ~~~~~~~v~~v~~spdg-~~l~~~~~~~~i~l~d~~~~~~--------~~~~~------------~~~~~~fs~d~~~~~ 66 (106)
+.++...|.+++|+|+| +++++++.|+.|++||..+++. ..+.. .+..++|+|++
T Consensus 222 ~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g---- 297 (447)
T 3dw8_B 222 MEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSG---- 297 (447)
T ss_dssp GGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTS----
T ss_pred ccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCC----
Confidence 44667799999999999 9999999999999999988763 22222 67889999999
Q ss_pred eeeeecccEEEEecCCCcEEEEECCC-CC
Q 036317 67 LSVLILRSWVLEGSGDGSVYAWSARS-GK 94 (106)
Q Consensus 67 ~~~~~~~~~i~t~s~d~~i~~wd~~~-~~ 94 (106)
++|++++. +.|++||+++ ++
T Consensus 298 -------~~l~~~~~-~~v~iwd~~~~~~ 318 (447)
T 3dw8_B 298 -------RYMMTRDY-LSVKVWDLNMENR 318 (447)
T ss_dssp -------SEEEEEES-SEEEEEETTCCSS
T ss_pred -------CEEEEeeC-CeEEEEeCCCCcc
Confidence 99999999 9999999997 65
No 109
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.36 E-value=3.3e-12 Score=95.71 Aligned_cols=87 Identities=11% Similarity=0.093 Sum_probs=70.3
Q ss_pred ecCCCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce-----eccCCCcEEE--EEecCCcceeeeeeecccEEEEe
Q 036317 7 SDGGDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL-----PVSHNSTLEA--SFSQHLSLVALSVLILRSWVLEG 79 (106)
Q Consensus 7 ~~~~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~-----~~~~~~~~~~--~fs~d~~~~~~~~~~~~~~i~t~ 79 (106)
.+.++.+.|.+++|+|++ .+++++.|++|++||+.+++. ..+...+.++ .|+|++ +++++|+
T Consensus 261 ~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g----------~~~laS~ 329 (524)
T 2j04_B 261 TLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFE----------DTVVSTV 329 (524)
T ss_dssp EECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTS----------CCEEEEE
T ss_pred EEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCC----------CeEEEEe
Confidence 345667899999999875 699999999999999987643 4566777777 578874 1578999
Q ss_pred cCCCcEEEEECCCCC------------CCcEEEeCCC
Q 036317 80 SGDGSVYAWSARSGK------------EPPVIKWAPG 104 (106)
Q Consensus 80 s~d~~i~~wd~~~~~------------~v~~i~~sp~ 104 (106)
+.|++|++||+++++ .+.+++|+|+
T Consensus 330 S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~ 366 (524)
T 2j04_B 330 AVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQ 366 (524)
T ss_dssp ETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETT
T ss_pred ccCCeEEEEECCCCCcccccccccccCcccceEeCCC
Confidence 999999999998754 2678999995
No 110
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.36 E-value=2.2e-11 Score=86.77 Aligned_cols=84 Identities=15% Similarity=0.210 Sum_probs=72.5
Q ss_pred cCCCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCc-e----eccCCCcEEEEEecCCcceeeeeeecccEEEEecCC
Q 036317 8 DGGDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGT-L----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGD 82 (106)
Q Consensus 8 ~~~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~-~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d 82 (106)
+.++...|.+++| +++++++++.++.+++||..... . ..+.+.+..+.|+|++ +++++|+.|
T Consensus 172 ~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~-----------~~l~s~~~d 238 (401)
T 4aez_A 172 MAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDG-----------LQLASGGND 238 (401)
T ss_dssp ECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTS-----------SEEEEEETT
T ss_pred ecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCC-----------CEEEEEeCC
Confidence 4466779999999 56789999999999999998433 2 4566778899999999 999999999
Q ss_pred CcEEEEECCCCC----------CCcEEEeCCC
Q 036317 83 GSVYAWSARSGK----------EPPVIKWAPG 104 (106)
Q Consensus 83 ~~i~~wd~~~~~----------~v~~i~~sp~ 104 (106)
+.|++||+++++ .|.+++|+|.
T Consensus 239 ~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~ 270 (401)
T 4aez_A 239 NVVQIWDARSSIPKFTKTNHNAAVKAVAWCPW 270 (401)
T ss_dssp SCEEEEETTCSSEEEEECCCSSCCCEEEECTT
T ss_pred CeEEEccCCCCCccEEecCCcceEEEEEECCC
Confidence 999999999876 8899999984
No 111
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.35 E-value=7.6e-12 Score=90.09 Aligned_cols=85 Identities=12% Similarity=0.206 Sum_probs=69.1
Q ss_pred cCCCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce----eccCCCcEEEEEecCCcceeeeeeecccEEEEecCCC
Q 036317 8 DGGDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDG 83 (106)
Q Consensus 8 ~~~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~ 83 (106)
..++...+.++ +++++++++++.|+.+++||..+++. ..+...+..+.|+|++ +++++|+.|+
T Consensus 266 ~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~-----------~~l~sg~~dg 332 (464)
T 3v7d_B 266 LRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHER-----------KRCISASMDT 332 (464)
T ss_dssp ECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTT-----------TEEEEEETTS
T ss_pred ccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCC-----------CEEEEEeCCC
Confidence 44555566665 78899999999999999999998876 3466778899999999 8888888888
Q ss_pred cEEEEECCCCC----------CCcEEEeCCCC
Q 036317 84 SVYAWSARSGK----------EPPVIKWAPGS 105 (106)
Q Consensus 84 ~i~~wd~~~~~----------~v~~i~~sp~~ 105 (106)
.|++||+++++ .|.+++|++++
T Consensus 333 ~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~ 364 (464)
T 3v7d_B 333 TIRIWDLENGELMYTLQGHTALVGLLRLSDKF 364 (464)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEECSSE
T ss_pred cEEEEECCCCcEEEEEeCCCCcEEEEEEcCCE
Confidence 89999888776 66777777643
No 112
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.35 E-value=9.8e-12 Score=89.70 Aligned_cols=87 Identities=13% Similarity=0.143 Sum_probs=73.2
Q ss_pred ecCCCCCCeeEEEECCCCC-eEEEEeCCCeEEEEEcCCCce-----------eccCCCcEEEEEec-CCcceeeeeeecc
Q 036317 7 SDGGDVSDANEVKLSNDGR-LMLLTTLEGHIHVLHSFQGTL-----------PVSHNSTLEASFSQ-HLSLVALSVLILR 73 (106)
Q Consensus 7 ~~~~~~~~v~~v~~spdg~-~l~~~~~~~~i~l~d~~~~~~-----------~~~~~~~~~~~fs~-d~~~~~~~~~~~~ 73 (106)
.+.+|...|.+++|+|+++ ++++++.++.|++||+.++.. ..+...+..+.|+| ++
T Consensus 176 ~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~----------- 244 (430)
T 2xyi_A 176 RLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHE----------- 244 (430)
T ss_dssp EEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCT-----------
T ss_pred EecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCC-----------
Confidence 3456677999999999998 999999999999999987321 24556778899999 66
Q ss_pred cEEEEecCCCcEEEEECCCC---C----------CCcEEEeCCC
Q 036317 74 SWVLEGSGDGSVYAWSARSG---K----------EPPVIKWAPG 104 (106)
Q Consensus 74 ~~i~t~s~d~~i~~wd~~~~---~----------~v~~i~~sp~ 104 (106)
..+++++.|+.|++||++++ + .|++++|+|.
T Consensus 245 ~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~ 288 (430)
T 2xyi_A 245 SLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPY 288 (430)
T ss_dssp TEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSS
T ss_pred CEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCC
Confidence 89999999999999999976 2 7889999985
No 113
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.34 E-value=4.6e-12 Score=91.68 Aligned_cols=74 Identities=23% Similarity=0.345 Sum_probs=66.3
Q ss_pred CCCCCCeeEEEECCC---CCeEEEEeCCCeEEEEEcCCCce-----eccCCCcEEEEEecCCcceeeeeeecccEEEEec
Q 036317 9 GGDVSDANEVKLSND---GRLMLLTTLEGHIHVLHSFQGTL-----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGS 80 (106)
Q Consensus 9 ~~~~~~v~~v~~spd---g~~l~~~~~~~~i~l~d~~~~~~-----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s 80 (106)
.++.+.|.+++|+|+ ++++++++.|+.|++||+.+++. ..+...+..++|+ ++ ++|++++
T Consensus 192 ~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~-----------~~l~s~~ 259 (450)
T 2vdu_B 192 LGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KD-----------YLLLSAG 259 (450)
T ss_dssp EECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-ST-----------TEEEEEE
T ss_pred ecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CC-----------CEEEEEe
Confidence 456678999999999 99999999999999999988875 2466778899999 99 9999999
Q ss_pred CCCcEEEEECCCCC
Q 036317 81 GDGSVYAWSARSGK 94 (106)
Q Consensus 81 ~d~~i~~wd~~~~~ 94 (106)
.|++|++||+++++
T Consensus 260 ~d~~v~vwd~~~~~ 273 (450)
T 2vdu_B 260 GDDKIFAWDWKTGK 273 (450)
T ss_dssp SSSEEEEEETTTCC
T ss_pred CCCeEEEEECCCCc
Confidence 99999999999987
No 114
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.34 E-value=3.3e-12 Score=88.05 Aligned_cols=83 Identities=8% Similarity=-0.017 Sum_probs=73.0
Q ss_pred CCCCCeeEEEECCCCC-eEEEEeCCCeEEEEEc-CCCce---ec--cCCCcEEEEEecCCcceeeeeeecccEEEEecCC
Q 036317 10 GDVSDANEVKLSNDGR-LMLLTTLEGHIHVLHS-FQGTL---PV--SHNSTLEASFSQHLSLVALSVLILRSWVLEGSGD 82 (106)
Q Consensus 10 ~~~~~v~~v~~spdg~-~l~~~~~~~~i~l~d~-~~~~~---~~--~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d 82 (106)
++...|.+++|+|+++ ++++++.++.+++||. .+++. .. +...+..+.|+| + +++++++.|
T Consensus 54 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~-----------~~l~s~~~d 121 (342)
T 1yfq_A 54 RYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYG-D-----------DKLIAASWD 121 (342)
T ss_dssp ECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEET-T-----------TEEEEEETT
T ss_pred ecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceEeccccCCCCceEEEEeCC-C-----------CEEEEEcCC
Confidence 5567999999999999 9999999999999999 88876 44 666778899999 9 999999999
Q ss_pred CcEEEEECCC---------CC---------CCcEEEeCCC
Q 036317 83 GSVYAWSARS---------GK---------EPPVIKWAPG 104 (106)
Q Consensus 83 ~~i~~wd~~~---------~~---------~v~~i~~sp~ 104 (106)
+.|++||+++ ++ .+.+++|+|+
T Consensus 122 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 161 (342)
T 1yfq_A 122 GLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSS 161 (342)
T ss_dssp SEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSS
T ss_pred CeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCC
Confidence 9999999887 54 6788888875
No 115
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.34 E-value=2e-11 Score=87.88 Aligned_cols=86 Identities=12% Similarity=0.195 Sum_probs=71.2
Q ss_pred eecCCCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce----eccCCCcEEEEEecCCcceeeeeeecccEEEEecC
Q 036317 6 FSDGGDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSG 81 (106)
Q Consensus 6 ~~~~~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~ 81 (106)
..+.++...|.+++|+|+|+++++++.|+.+++||..+++. ..+...+..+.|+ + +++++++.
T Consensus 304 ~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~-----------~~l~s~s~ 370 (464)
T 3v7d_B 304 YILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS--D-----------KFLVSAAA 370 (464)
T ss_dssp EEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--S-----------SEEEEEET
T ss_pred EEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--C-----------CEEEEEeC
Confidence 34456778999999999999999999999999999999887 3456667677775 7 78999999
Q ss_pred CCcEEEEECCCCC---------CCcEEEeCCC
Q 036317 82 DGSVYAWSARSGK---------EPPVIKWAPG 104 (106)
Q Consensus 82 d~~i~~wd~~~~~---------~v~~i~~sp~ 104 (106)
|++|++||+++++ .+..+.|+|+
T Consensus 371 dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 402 (464)
T 3v7d_B 371 DGSIRGWDANDYSRKFSYHHTNLSAITTFYVS 402 (464)
T ss_dssp TSEEEEEETTTCCEEEEEECTTCCCEEEEEEC
T ss_pred CCcEEEEECCCCceeeeecCCCCccEEEEEeC
Confidence 9999999999876 5566666654
No 116
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.33 E-value=1.9e-11 Score=88.45 Aligned_cols=83 Identities=19% Similarity=0.217 Sum_probs=68.6
Q ss_pred CCCCeeEEEECCCCCeEEEEeCCC---eEEEEEcCCCce---eccCCCcEEEEEecCCcceeeeeeecccEEE-EecCCC
Q 036317 11 DVSDANEVKLSNDGRLMLLTTLEG---HIHVLHSFQGTL---PVSHNSTLEASFSQHLSLVALSVLILRSWVL-EGSGDG 83 (106)
Q Consensus 11 ~~~~v~~v~~spdg~~l~~~~~~~---~i~l~d~~~~~~---~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~-t~s~d~ 83 (106)
+...+.+++|||||++++.++.++ .+++||+.+++. ..+...+..+.|+||| ++|+ +++.++
T Consensus 177 ~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg-----------~~la~~~~~~g 245 (415)
T 2hqs_A 177 SPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDG-----------SKLAFALSKTG 245 (415)
T ss_dssp ESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTS-----------SEEEEEECTTS
T ss_pred CCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEEcCCC-----------CEEEEEEecCC
Confidence 445899999999999999998875 999999999877 3345567789999999 8777 666665
Q ss_pred --cEEEEECCCCC---------CCcEEEeCCC
Q 036317 84 --SVYAWSARSGK---------EPPVIKWAPG 104 (106)
Q Consensus 84 --~i~~wd~~~~~---------~v~~i~~sp~ 104 (106)
.|++||+++++ .+.+++|+|+
T Consensus 246 ~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spd 277 (415)
T 2hqs_A 246 SLNLYVMDLASGQIRQVTDGRSNNTEPTWFPD 277 (415)
T ss_dssp SCEEEEEETTTCCEEECCCCSSCEEEEEECTT
T ss_pred CceEEEEECCCCCEEeCcCCCCcccceEECCC
Confidence 49999999886 6778999986
No 117
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.33 E-value=1.1e-11 Score=91.24 Aligned_cols=71 Identities=10% Similarity=0.210 Sum_probs=62.9
Q ss_pred CCCCeeEEEECC----------CCCeEEEEeCCCeEEEEEcCCC-ce----eccCCCcEEEEEecCCcceeeeeeecccE
Q 036317 11 DVSDANEVKLSN----------DGRLMLLTTLEGHIHVLHSFQG-TL----PVSHNSTLEASFSQHLSLVALSVLILRSW 75 (106)
Q Consensus 11 ~~~~v~~v~~sp----------dg~~l~~~~~~~~i~l~d~~~~-~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~ 75 (106)
|...|++++|+| +++++++++.|+.|++||..++ +. ..+...+..++|+|++ +
T Consensus 530 h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~-----------~- 597 (615)
T 1pgu_A 530 RTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPS-----------T- 597 (615)
T ss_dssp CSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETT-----------E-
T ss_pred CCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCccceEEEEEcCCC-----------C-
Confidence 677999999999 9999999999999999999987 43 4466788899999999 9
Q ss_pred EEEecCCCcEEEEECCCC
Q 036317 76 VLEGSGDGSVYAWSARSG 93 (106)
Q Consensus 76 i~t~s~d~~i~~wd~~~~ 93 (106)
|++++.|++|++|+++++
T Consensus 598 l~s~~~d~~v~iw~~~~~ 615 (615)
T 1pgu_A 598 LVSSGADACIKRWNVVLE 615 (615)
T ss_dssp EEEEETTSCEEEEEEC--
T ss_pred eEEecCCceEEEEeeecC
Confidence 999999999999999753
No 118
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.32 E-value=4.1e-11 Score=83.88 Aligned_cols=88 Identities=14% Similarity=0.129 Sum_probs=72.4
Q ss_pred CCCCCeeEEEECC-CCCeEEEEeCCCeEEEEEcCCCce---eccCCCcEEEEEecCCcceeeeeeecccEEEEecCCCcE
Q 036317 10 GDVSDANEVKLSN-DGRLMLLTTLEGHIHVLHSFQGTL---PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSV 85 (106)
Q Consensus 10 ~~~~~v~~v~~sp-dg~~l~~~~~~~~i~l~d~~~~~~---~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i 85 (106)
++...|.+++|+| +++++++++.++.+++||..+++. ......+..+.|+|.+ ....++++++.|+.|
T Consensus 97 ~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~v 168 (408)
T 4a11_B 97 VHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVS--------TKHCLVAVGTRGPKV 168 (408)
T ss_dssp CCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSC--------SSCCEEEEEESSSSE
T ss_pred cCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCC--------CCCcEEEEEcCCCeE
Confidence 4677999999999 788999999999999999998877 3345566778888854 000599999999999
Q ss_pred EEEECCCCC----------CCcEEEeCCCC
Q 036317 86 YAWSARSGK----------EPPVIKWAPGS 105 (106)
Q Consensus 86 ~~wd~~~~~----------~v~~i~~sp~~ 105 (106)
++||+++++ .|.+++|+|+.
T Consensus 169 ~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~ 198 (408)
T 4a11_B 169 QLCDLKSGSCSHILQGHRQEILAVSWSPRY 198 (408)
T ss_dssp EEEESSSSCCCEEECCCCSCEEEEEECSSC
T ss_pred EEEeCCCcceeeeecCCCCcEEEEEECCCC
Confidence 999999876 78899999863
No 119
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.29 E-value=1.9e-11 Score=92.91 Aligned_cols=68 Identities=6% Similarity=0.120 Sum_probs=58.4
Q ss_pred CeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce---------------eccCCCcEEEEEecCCcceeeeeeecccEEEE
Q 036317 14 DANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL---------------PVSHNSTLEASFSQHLSLVALSVLILRSWVLE 78 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~---------------~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t 78 (106)
.|.+++|||||+++++++.|++|++||+.++.. .+|.+.+.+++|+||| +++
T Consensus 131 sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-------------Laa 197 (588)
T 2j04_A 131 TYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-------------LVA 197 (588)
T ss_dssp CEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-------------EEE
T ss_pred cEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc-------------EEE
Confidence 599999999999999999999999999988752 2244578899999985 678
Q ss_pred ecCCCcEEEEECCCCC
Q 036317 79 GSGDGSVYAWSARSGK 94 (106)
Q Consensus 79 ~s~d~~i~~wd~~~~~ 94 (106)
++.|++|++||+++++
T Consensus 198 ss~D~tVrlWd~~~~~ 213 (588)
T 2j04_A 198 ALSNNSVFSMTVSASS 213 (588)
T ss_dssp EETTCCEEEECCCSSS
T ss_pred EeCCCeEEEEECCCCc
Confidence 8889999999997654
No 120
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.24 E-value=1.2e-10 Score=83.79 Aligned_cols=79 Identities=14% Similarity=0.238 Sum_probs=65.0
Q ss_pred CCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce----eccCCCcEEEEEecCCcceeeeeeecccEEEEecCCCcEE
Q 036317 11 DVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSVY 86 (106)
Q Consensus 11 ~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~ 86 (106)
+...|.++++ ||+++++++.|+.|++||..+++. ..+.+.+.++.| ++ +++++|+.||+|+
T Consensus 132 ~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~-----------~~l~sg~~dg~i~ 196 (435)
T 1p22_A 132 TSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DE-----------RVIITGSSDSTVR 196 (435)
T ss_dssp SCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CS-----------SEEEEEETTSCEE
T ss_pred CCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CC-----------CEEEEEcCCCeEE
Confidence 3346777766 899999999999999999998876 446667766766 88 8999999999999
Q ss_pred EEECCCCC----------CCcEEEeCCC
Q 036317 87 AWSARSGK----------EPPVIKWAPG 104 (106)
Q Consensus 87 ~wd~~~~~----------~v~~i~~sp~ 104 (106)
+||+++++ .|.+++|+++
T Consensus 197 vwd~~~~~~~~~~~~h~~~v~~l~~~~~ 224 (435)
T 1p22_A 197 VWDVNTGEMLNTLIHHCEAVLHLRFNNG 224 (435)
T ss_dssp EEESSSCCEEEEECCCCSCEEEEECCTT
T ss_pred EEECCCCcEEEEEcCCCCcEEEEEEcCC
Confidence 99999887 6777777764
No 121
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.23 E-value=5.3e-11 Score=85.82 Aligned_cols=57 Identities=18% Similarity=0.274 Sum_probs=47.3
Q ss_pred CCeEEEEeCCCeEEEEEcCCCce----eccCCCcE-EEEEecCCcceeeeeeecccEEEEecCCCcEEEEECC
Q 036317 24 GRLMLLTTLEGHIHVLHSFQGTL----PVSHNSTL-EASFSQHLSLVALSVLILRSWVLEGSGDGSVYAWSAR 91 (106)
Q Consensus 24 g~~l~~~~~~~~i~l~d~~~~~~----~~~~~~~~-~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~~wd~~ 91 (106)
+.++++++.|++|+|||+.+++. ..+...+. .++||||| ++|++|+.|++|+|||+.
T Consensus 295 g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG-----------~~LaSGS~D~TIklWd~~ 356 (356)
T 2w18_A 295 DHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTD-----------SHLLAGQKDGNIFVYHYS 356 (356)
T ss_dssp TTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSS-----------SEEEEECTTSCEEEEEEC
T ss_pred CCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCC-----------CEEEEEECCCcEEEecCC
Confidence 55788899999999999999987 33554444 58999999 999999999999999963
No 122
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.23 E-value=1.2e-10 Score=81.96 Aligned_cols=81 Identities=12% Similarity=0.167 Sum_probs=66.6
Q ss_pred CCeeEEEECCCCCeEE-EEeCCCeEEEEEcCCCce---eccCCCcEEEEEecCCcceeeeeeecccEE-EEecCCCcEEE
Q 036317 13 SDANEVKLSNDGRLML-LTTLEGHIHVLHSFQGTL---PVSHNSTLEASFSQHLSLVALSVLILRSWV-LEGSGDGSVYA 87 (106)
Q Consensus 13 ~~v~~v~~spdg~~l~-~~~~~~~i~l~d~~~~~~---~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i-~t~s~d~~i~~ 87 (106)
..+.+++|+|+|++++ +++.++.+++||..+++. ......+..++|+|++ ++| ++++.++.|++
T Consensus 32 ~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~spdg-----------~~l~~~~~~~~~v~v 100 (391)
T 1l0q_A 32 SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDG-----------KQVYVTNMASSTLSV 100 (391)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEEEEEECTTS-----------SEEEEEETTTTEEEE
T ss_pred CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCCccceEECCCC-----------CEEEEEECCCCEEEE
Confidence 4689999999999874 556899999999999887 2233467789999999 877 45667799999
Q ss_pred EECCCCC---------CCcEEEeCCC
Q 036317 88 WSARSGK---------EPPVIKWAPG 104 (106)
Q Consensus 88 wd~~~~~---------~v~~i~~sp~ 104 (106)
||+++++ .+.+++|+|+
T Consensus 101 ~d~~~~~~~~~~~~~~~~~~~~~s~d 126 (391)
T 1l0q_A 101 IDTTSNTVAGTVKTGKSPLGLALSPD 126 (391)
T ss_dssp EETTTTEEEEEEECSSSEEEEEECTT
T ss_pred EECCCCeEEEEEeCCCCcceEEECCC
Confidence 9999887 6678888886
No 123
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.23 E-value=9.9e-11 Score=82.71 Aligned_cols=69 Identities=17% Similarity=0.262 Sum_probs=56.2
Q ss_pred CeEEE--EeCCCeEEEEEcCCCc-----------------e---eccCCCcEEEEEecCCcceeeeeeecccEEEEecCC
Q 036317 25 RLMLL--TTLEGHIHVLHSFQGT-----------------L---PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGD 82 (106)
Q Consensus 25 ~~l~~--~~~~~~i~l~d~~~~~-----------------~---~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d 82 (106)
++++. ++.++.|++||..+++ . ..|.+.+..++|+||+ +++++|+.|
T Consensus 148 ~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g-----------~~l~s~s~d 216 (355)
T 3vu4_A 148 GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKS-----------DMVATCSQD 216 (355)
T ss_dssp TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTS-----------SEEEEEETT
T ss_pred cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCC-----------CEEEEEeCC
Confidence 34554 4688999999998754 2 4567788899999999 999999999
Q ss_pred Cc-EEEEECCCCC------------CCcEEEeCCC
Q 036317 83 GS-VYAWSARSGK------------EPPVIKWAPG 104 (106)
Q Consensus 83 ~~-i~~wd~~~~~------------~v~~i~~sp~ 104 (106)
++ |++||+++++ .|.+++|+|+
T Consensus 217 ~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~ 251 (355)
T 3vu4_A 217 GTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTD 251 (355)
T ss_dssp CSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTT
T ss_pred CCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCC
Confidence 99 9999999876 5788999986
No 124
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.21 E-value=2.7e-10 Score=80.09 Aligned_cols=81 Identities=21% Similarity=0.284 Sum_probs=67.3
Q ss_pred CCeeEEEECCCCCeEEEEe-CCCeEEEEEcCCCce---eccCCCcEEEEEecCCcceeeeeeecccEE-EEecCCCcEEE
Q 036317 13 SDANEVKLSNDGRLMLLTT-LEGHIHVLHSFQGTL---PVSHNSTLEASFSQHLSLVALSVLILRSWV-LEGSGDGSVYA 87 (106)
Q Consensus 13 ~~v~~v~~spdg~~l~~~~-~~~~i~l~d~~~~~~---~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i-~t~s~d~~i~~ 87 (106)
..+..++|+|+|+++++++ .++.+++||..+++. ......+..++|+|++ +++ ++++.|+.|++
T Consensus 74 ~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg-----------~~l~~~~~~~~~v~~ 142 (391)
T 1l0q_A 74 SSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDG-----------KKLYVTNNGDKTVSV 142 (391)
T ss_dssp SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTS-----------SEEEEEETTTTEEEE
T ss_pred CCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCC-----------CEEEEEeCCCCEEEE
Confidence 3899999999999886655 569999999999877 2344466789999999 877 78888999999
Q ss_pred EECCCCC---------CCcEEEeCCC
Q 036317 88 WSARSGK---------EPPVIKWAPG 104 (106)
Q Consensus 88 wd~~~~~---------~v~~i~~sp~ 104 (106)
||+++++ .+.++.|+|+
T Consensus 143 ~d~~~~~~~~~~~~~~~~~~~~~~~d 168 (391)
T 1l0q_A 143 INTVTKAVINTVSVGRSPKGIAVTPD 168 (391)
T ss_dssp EETTTTEEEEEEECCSSEEEEEECTT
T ss_pred EECCCCcEEEEEecCCCcceEEECCC
Confidence 9999876 5677888876
No 125
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.19 E-value=1.3e-10 Score=82.75 Aligned_cols=84 Identities=6% Similarity=0.009 Sum_probs=70.4
Q ss_pred CCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce----eccCCCcEEEEEecCCcceeeeeeecccEE-EEecCCCc
Q 036317 10 GDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVALSVLILRSWV-LEGSGDGS 84 (106)
Q Consensus 10 ~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i-~t~s~d~~ 84 (106)
++.+.|.+++|+|+|+.+++++.++.+++||..+++. ..+...+..++|+|++ +++ ++++.|+.
T Consensus 167 ~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~l~~~~~~~~~ 235 (433)
T 3bws_A 167 KKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIR-----------DLVYCSNWISED 235 (433)
T ss_dssp TTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTT-----------TEEEEEETTTTE
T ss_pred ccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCC-----------CEEEEEecCCCc
Confidence 4566899999999999999999999999999988876 3345567789999999 877 56668999
Q ss_pred EEEEECCCCC---------CCcEEEeCCC
Q 036317 85 VYAWSARSGK---------EPPVIKWAPG 104 (106)
Q Consensus 85 i~~wd~~~~~---------~v~~i~~sp~ 104 (106)
|++||+++++ .+.+++|+|+
T Consensus 236 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 264 (433)
T 3bws_A 236 ISVIDRKTKLEIRKTDKIGLPRGLLLSKD 264 (433)
T ss_dssp EEEEETTTTEEEEECCCCSEEEEEEECTT
T ss_pred EEEEECCCCcEEEEecCCCCceEEEEcCC
Confidence 9999999876 5678888875
No 126
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.16 E-value=1.9e-10 Score=82.67 Aligned_cols=73 Identities=15% Similarity=0.226 Sum_probs=53.1
Q ss_pred cCCCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce----eccCCCcEEEEEecCCcceeeeeeecccEEEEecCCC
Q 036317 8 DGGDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDG 83 (106)
Q Consensus 8 ~~~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~ 83 (106)
+.+|.+.+.. .++++|+++++++.|+.+++||..+++. ..+.+.+..+.|+ + ..+++|+.|+
T Consensus 114 l~~h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~-----------~~l~s~~~dg 179 (445)
T 2ovr_B 114 LKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--D-----------NIIISGSTDR 179 (445)
T ss_dssp EECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--T-----------TEEEEEETTS
T ss_pred ecccCCCcEE-EEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--C-----------CEEEEEeCCC
Confidence 4566665433 3666799999999999999999998876 4466677777776 5 5666677777
Q ss_pred cEEEEECCCCC
Q 036317 84 SVYAWSARSGK 94 (106)
Q Consensus 84 ~i~~wd~~~~~ 94 (106)
+|++||+++++
T Consensus 180 ~i~vwd~~~~~ 190 (445)
T 2ovr_B 180 TLKVWNAETGE 190 (445)
T ss_dssp CEEEEETTTTE
T ss_pred eEEEEECCcCc
Confidence 77777766654
No 127
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.15 E-value=4.7e-10 Score=80.66 Aligned_cols=82 Identities=16% Similarity=0.240 Sum_probs=66.9
Q ss_pred cCCCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce----eccCCCcEEEEEecCCcceeeeeeecccEEEEecCCC
Q 036317 8 DGGDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDG 83 (106)
Q Consensus 8 ~~~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~ 83 (106)
..++...|.+++| +++++++++.|+.+++||..+++. ..+...+..+.| ++ +++++|+.|+
T Consensus 252 ~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~-----------~~l~~g~~dg 316 (435)
T 1p22_A 252 LVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RD-----------RLVVSGSSDN 316 (435)
T ss_dssp ECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ET-----------TEEEEEETTS
T ss_pred ecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CC-----------CEEEEEeCCC
Confidence 4566778999999 889999999999999999998876 345556666666 57 8899999999
Q ss_pred cEEEEECCCCC----------CCcEEEeCCC
Q 036317 84 SVYAWSARSGK----------EPPVIKWAPG 104 (106)
Q Consensus 84 ~i~~wd~~~~~----------~v~~i~~sp~ 104 (106)
.|++||+++++ .|.+++|+++
T Consensus 317 ~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~ 347 (435)
T 1p22_A 317 TIRLWDIECGACLRVLEGHEELVRCIRFDNK 347 (435)
T ss_dssp CEEEEETTTCCEEEEECCCSSCEEEEECCSS
T ss_pred eEEEEECCCCCEEEEEeCCcCcEEEEEecCC
Confidence 99999999887 6677777554
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.11 E-value=1.2e-09 Score=78.85 Aligned_cols=86 Identities=14% Similarity=0.106 Sum_probs=67.4
Q ss_pred cCCCCCCeeEEEECCCCCeEEEEeCC-C--eEEEEEcCCCce---eccCCCcEEEEEecCCcceeeeeeecccEEEEecC
Q 036317 8 DGGDVSDANEVKLSNDGRLMLLTTLE-G--HIHVLHSFQGTL---PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSG 81 (106)
Q Consensus 8 ~~~~~~~v~~v~~spdg~~l~~~~~~-~--~i~l~d~~~~~~---~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~ 81 (106)
+..+...+.+++|+|||++++.++.+ + .+.+||..+++. ..+...+..+.|+||| ++|++++.
T Consensus 262 l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdG-----------~~l~~~~~ 330 (415)
T 2hqs_A 262 VTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDG-----------KFMVMVSS 330 (415)
T ss_dssp CCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTS-----------SEEEEEEE
T ss_pred CcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecCCCcccCeEECCCC-----------CEEEEEEC
Confidence 33445689999999999999988864 3 788889988776 2233445679999999 88888776
Q ss_pred C---CcEEEEECCCCC--------CCcEEEeCCC
Q 036317 82 D---GSVYAWSARSGK--------EPPVIKWAPG 104 (106)
Q Consensus 82 d---~~i~~wd~~~~~--------~v~~i~~sp~ 104 (106)
+ ..|++||+++++ .+.+++|+|+
T Consensus 331 ~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~spd 364 (415)
T 2hqs_A 331 NGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPN 364 (415)
T ss_dssp CSSCEEEEEEETTTCCEEECCCSSSCEEEEECTT
T ss_pred cCCceEEEEEECCCCCEEEecCCCCcCCeEEcCC
Confidence 4 589999999887 5778899986
No 129
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.11 E-value=5.6e-10 Score=88.49 Aligned_cols=84 Identities=7% Similarity=0.099 Sum_probs=69.5
Q ss_pred CCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce----eccCCCcEEEEEecCCcceeeeeeecccEEEEecCC---
Q 036317 10 GDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGD--- 82 (106)
Q Consensus 10 ~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d--- 82 (106)
++...+..++|||||++++.++.++.+++||+.+++. ..+.+.+..++||||| ++|++++.+
T Consensus 376 ~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG-----------~~la~~~~~~~~ 444 (1045)
T 1k32_A 376 ENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNS-----------RFIAYGFPLKHG 444 (1045)
T ss_dssp CCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTS-----------CEEEEEEEECSS
T ss_pred CCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCC-----------CeEEEEecCccc
Confidence 4456899999999999999999999999999999887 2455566779999999 888877654
Q ss_pred -------CcEEEEECCCCC---------CCcEEEeCCC
Q 036317 83 -------GSVYAWSARSGK---------EPPVIKWAPG 104 (106)
Q Consensus 83 -------~~i~~wd~~~~~---------~v~~i~~sp~ 104 (106)
+.|++||+.+++ .+..+.|+|+
T Consensus 445 ~~~~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~spd 482 (1045)
T 1k32_A 445 ETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDAD 482 (1045)
T ss_dssp TTCSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTT
T ss_pred cccCCCCCeEEEEECCCCcEEEeeCCCcccCCceEcCC
Confidence 399999999876 4566788885
No 130
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.11 E-value=9.2e-10 Score=78.29 Aligned_cols=84 Identities=11% Similarity=-0.044 Sum_probs=68.2
Q ss_pred CCCCCeeEEEECCCCCeEEEEe-CCCeEEEEEcCCCce---eccCCCcEEEEEecCCcceeeeeeecccEEEEec-----
Q 036317 10 GDVSDANEVKLSNDGRLMLLTT-LEGHIHVLHSFQGTL---PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGS----- 80 (106)
Q Consensus 10 ~~~~~v~~v~~spdg~~l~~~~-~~~~i~l~d~~~~~~---~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s----- 80 (106)
.+...+..++|+|+|+++++++ .++.+++||..+++. ......+..+.|+|++ +++++++
T Consensus 209 ~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g-----------~~l~~~~~~~~~ 277 (433)
T 3bws_A 209 LTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDG-----------KELYIAQFSASN 277 (433)
T ss_dssp CSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTS-----------SEEEEEEEESCT
T ss_pred CCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCC-----------CEEEEEECCCCc
Confidence 4455899999999999886655 789999999998876 2233446789999999 8888887
Q ss_pred ---CCCcEEEEECCCCC---------CCcEEEeCCC
Q 036317 81 ---GDGSVYAWSARSGK---------EPPVIKWAPG 104 (106)
Q Consensus 81 ---~d~~i~~wd~~~~~---------~v~~i~~sp~ 104 (106)
.|+.|++||+++++ .+.+++|+|+
T Consensus 278 ~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 313 (433)
T 3bws_A 278 QESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNT 313 (433)
T ss_dssp TCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSS
T ss_pred cccCCCeEEEEECCCCcEEeeccCCCCcceEEECCC
Confidence 58899999999886 6677888875
No 131
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.10 E-value=1.5e-09 Score=78.01 Aligned_cols=83 Identities=16% Similarity=0.285 Sum_probs=61.3
Q ss_pred cCCCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce----eccCCCcEEEEEecCCcceeeeeeecccEEEEecCCC
Q 036317 8 DGGDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDG 83 (106)
Q Consensus 8 ~~~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~ 83 (106)
+.++...|.+++| +++++++++.|+.+++||..+++. ..+...+. .+++++ +++++|+.|+
T Consensus 275 ~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~--~~~~~~-----------~~l~~~~~dg 339 (445)
T 2ovr_B 275 LQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTS--GMELKD-----------NILVSGNADS 339 (445)
T ss_dssp ECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEE--EEEEET-----------TEEEEEETTS
T ss_pred ecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEE--EEEEeC-----------CEEEEEeCCC
Confidence 4456667888887 777888888888888888877765 22333333 334466 8899999999
Q ss_pred cEEEEECCCCC-------------CCcEEEeCCCC
Q 036317 84 SVYAWSARSGK-------------EPPVIKWAPGS 105 (106)
Q Consensus 84 ~i~~wd~~~~~-------------~v~~i~~sp~~ 105 (106)
.|++||+++++ .|.+++|++++
T Consensus 340 ~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 374 (445)
T 2ovr_B 340 TVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNF 374 (445)
T ss_dssp CEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSE
T ss_pred eEEEEECCCCcEEEEEccCCCCCCCEEEEEECCCE
Confidence 99999999887 57778887653
No 132
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.10 E-value=7.3e-10 Score=84.07 Aligned_cols=80 Identities=14% Similarity=0.172 Sum_probs=66.3
Q ss_pred CCeeEEEECCCCCeEEEEeC-CC-----eEEEEEcCCCce----eccC------------------------CCcEEEEE
Q 036317 13 SDANEVKLSNDGRLMLLTTL-EG-----HIHVLHSFQGTL----PVSH------------------------NSTLEASF 58 (106)
Q Consensus 13 ~~v~~v~~spdg~~l~~~~~-~~-----~i~l~d~~~~~~----~~~~------------------------~~~~~~~f 58 (106)
..+.+++|||||++++.++. ++ .+++||..+++. ..+. ..+..++|
T Consensus 37 ~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 116 (741)
T 2ecf_A 37 PTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQW 116 (741)
T ss_dssp CCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEE
T ss_pred CCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEE
Confidence 47999999999999999988 77 899999998876 1111 11456899
Q ss_pred ecCCcceeeeeeecccEEEEecCCCcEEEEECCCC---C---------CCcEEEeCCC
Q 036317 59 SQHLSLVALSVLILRSWVLEGSGDGSVYAWSARSG---K---------EPPVIKWAPG 104 (106)
Q Consensus 59 s~d~~~~~~~~~~~~~~i~t~s~d~~i~~wd~~~~---~---------~v~~i~~sp~ 104 (106)
|||| ++|++++. +.|++||+.++ + .+..++|||+
T Consensus 117 SpDg-----------~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPD 162 (741)
T 2ecf_A 117 SPDA-----------QRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPK 162 (741)
T ss_dssp CTTS-----------SEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTT
T ss_pred CCCC-----------CEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCC
Confidence 9999 99988876 89999999988 5 5788999997
No 133
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.02 E-value=6.9e-10 Score=84.18 Aligned_cols=68 Identities=13% Similarity=0.046 Sum_probs=57.1
Q ss_pred eeEEEECCCCCeEEEEeC---------CCeEEEEEcCCCce---eccCCCcEEEEEecCCcceeeeeeecccEEEEecCC
Q 036317 15 ANEVKLSNDGRLMLLTTL---------EGHIHVLHSFQGTL---PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGD 82 (106)
Q Consensus 15 v~~v~~spdg~~l~~~~~---------~~~i~l~d~~~~~~---~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d 82 (106)
+.+++|||||++++.++. ++++++||+.+++. ..-...+..++||||| +.|+.++ +
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~~~~~~~~~SPDG-----------~~la~~~-~ 129 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELPRPIQYLCWSPVG-----------SKLAYVY-Q 129 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCSSBCCEEECSST-----------TCEEEEE-T
T ss_pred eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecCcccccceECCCC-----------CEEEEEE-C
Confidence 889999999999998876 68999999998877 3333456679999999 8888885 6
Q ss_pred CcEEEEECCCCC
Q 036317 83 GSVYAWSARSGK 94 (106)
Q Consensus 83 ~~i~~wd~~~~~ 94 (106)
+.|++||+.+++
T Consensus 130 ~~i~~~~~~~g~ 141 (719)
T 1z68_A 130 NNIYLKQRPGDP 141 (719)
T ss_dssp TEEEEESSTTSC
T ss_pred CeEEEEeCCCCC
Confidence 799999998876
No 134
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.99 E-value=3e-09 Score=72.89 Aligned_cols=82 Identities=17% Similarity=0.162 Sum_probs=62.8
Q ss_pred CCCeeEEEECCCCCeEEEEeCC-CeEEEEEcC--CCce-----eccCCCcEEEEEecCCcceeeeeeecccEEEEec-CC
Q 036317 12 VSDANEVKLSNDGRLMLLTTLE-GHIHVLHSF--QGTL-----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGS-GD 82 (106)
Q Consensus 12 ~~~v~~v~~spdg~~l~~~~~~-~~i~l~d~~--~~~~-----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s-~d 82 (106)
...+..++|+|+|+++++++.+ +.+.+|++. +++. ......+..++|+|++ ++++.++ .+
T Consensus 37 ~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg-----------~~l~~~~~~~ 105 (343)
T 1ri6_A 37 PGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQG-----------QFVFVGSYNA 105 (343)
T ss_dssp SSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTS-----------SEEEEEETTT
T ss_pred CCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCCCCcEEEEcCCC-----------CEEEEEecCC
Confidence 3478899999999999888876 999999987 5654 1122356789999999 8776554 48
Q ss_pred CcEEEEECCCCC------------CCcEEEeCCC
Q 036317 83 GSVYAWSARSGK------------EPPVIKWAPG 104 (106)
Q Consensus 83 ~~i~~wd~~~~~------------~v~~i~~sp~ 104 (106)
+.|++||+.+++ .+.+++|+|+
T Consensus 106 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~d 139 (343)
T 1ri6_A 106 GNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPD 139 (343)
T ss_dssp TEEEEEEEETTEEEEEEEEECCCTTBCCCEECTT
T ss_pred CeEEEEECCCCccccccccccCCCCceEEEECCC
Confidence 899999994322 6778888886
No 135
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.99 E-value=5.4e-09 Score=71.44 Aligned_cols=76 Identities=11% Similarity=-0.038 Sum_probs=61.9
Q ss_pred CCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce---eccCCCcEEEEEecCCcceeeeeeecccEEEEecCCCcEEEEE
Q 036317 13 SDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL---PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSVYAWS 89 (106)
Q Consensus 13 ~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~---~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~~wd 89 (106)
..+..++|+|||++++++ ++.+.+||..+++. ......+..++|+||+ +++++++.++.|++||
T Consensus 241 ~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg-----------~~l~~~~~~~~i~v~d 307 (337)
T 1pby_B 241 VFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLPHSYYSVNVSTDG-----------STVWLGGALGDLAAYD 307 (337)
T ss_dssp SCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECTTS-----------CEEEEESBSSEEEEEE
T ss_pred CceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCCCceeeEEECCCC-----------CEEEEEcCCCcEEEEE
Confidence 356789999999998887 79999999998876 1223356789999999 9888888899999999
Q ss_pred CCCCCCCcEEEe
Q 036317 90 ARSGKEPPVIKW 101 (106)
Q Consensus 90 ~~~~~~v~~i~~ 101 (106)
+++++.+..+..
T Consensus 308 ~~~~~~~~~~~~ 319 (337)
T 1pby_B 308 AETLEKKGQVDL 319 (337)
T ss_dssp TTTCCEEEEEEC
T ss_pred CcCCcEEEEEEc
Confidence 999985555543
No 136
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.98 E-value=1.6e-09 Score=81.86 Aligned_cols=69 Identities=13% Similarity=0.031 Sum_probs=56.3
Q ss_pred CeeEEEECCCCCeEEEEeCC---------CeEEEEEcCCCce---ec---cCCCcEEEEEecCCcceeeeeeecccEEEE
Q 036317 14 DANEVKLSNDGRLMLLTTLE---------GHIHVLHSFQGTL---PV---SHNSTLEASFSQHLSLVALSVLILRSWVLE 78 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~~~~~---------~~i~l~d~~~~~~---~~---~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t 78 (106)
.|.+++|||||++++.++.+ +.+.+||+.+++. .. +...+..++||||| ++|+.
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG-----------~~la~ 130 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKG-----------QQLIF 130 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSST-----------TCEEE
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCC-----------CEEEE
Confidence 48999999999999998764 7888999998875 11 22235678999999 99888
Q ss_pred ecCCCcEEEEECCCCC
Q 036317 79 GSGDGSVYAWSARSGK 94 (106)
Q Consensus 79 ~s~d~~i~~wd~~~~~ 94 (106)
++. +.|++||+.+++
T Consensus 131 ~~~-~~i~~~~~~~g~ 145 (723)
T 1xfd_A 131 IFE-NNIYYCAHVGKQ 145 (723)
T ss_dssp EET-TEEEEESSSSSC
T ss_pred EEC-CeEEEEECCCCc
Confidence 876 699999999876
No 137
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.98 E-value=4.1e-09 Score=70.29 Aligned_cols=82 Identities=17% Similarity=0.171 Sum_probs=61.0
Q ss_pred CCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCC-Cce----eccC-CCcEEEEEecCCcceeeeeeecccEEEEec--CC
Q 036317 11 DVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQ-GTL----PVSH-NSTLEASFSQHLSLVALSVLILRSWVLEGS--GD 82 (106)
Q Consensus 11 ~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~-~~~----~~~~-~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s--~d 82 (106)
+...+.+++|+|||++++++. ++.+++||..+ ++. ..+. ..+..+.|+||+ ++|++++ .+
T Consensus 40 ~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg-----------~~l~~~~~~~~ 107 (297)
T 2ojh_A 40 TPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDG-----------ALYAISDKVEF 107 (297)
T ss_dssp ESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTS-----------SEEEEEECTTT
T ss_pred CCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCC-----------CEEEEEEeCCC
Confidence 355899999999999888876 78999999998 766 1221 345568999999 9888887 33
Q ss_pred C--cEEEEECCCCC--------CCcEEEeCCC
Q 036317 83 G--SVYAWSARSGK--------EPPVIKWAPG 104 (106)
Q Consensus 83 ~--~i~~wd~~~~~--------~v~~i~~sp~ 104 (106)
+ .|..|++.+++ .+..++|+|+
T Consensus 108 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~spd 139 (297)
T 2ojh_A 108 GKSAIYLLPSTGGTPRLMTKNLPSYWHGWSPD 139 (297)
T ss_dssp SSCEEEEEETTCCCCEECCSSSSEEEEEECTT
T ss_pred CcceEEEEECCCCceEEeecCCCccceEECCC
Confidence 4 45555555554 5667788886
No 138
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.97 E-value=3.4e-09 Score=80.39 Aligned_cols=67 Identities=16% Similarity=0.181 Sum_probs=56.7
Q ss_pred eeEEEECCCCCeEEEEeCCCeEEEEEcCCC---ce---eccCCCcEEEEEecCCcceeeeeeecccEEEEecCCCcEEEE
Q 036317 15 ANEVKLSNDGRLMLLTTLEGHIHVLHSFQG---TL---PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSVYAW 88 (106)
Q Consensus 15 v~~v~~spdg~~l~~~~~~~~i~l~d~~~~---~~---~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~~w 88 (106)
+.+++|||||++++.++. +.+++||+.++ +. ..+...+..+.||||| ++|+.++. +.|++|
T Consensus 111 v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG-----------~~la~~~~-~~i~~~ 177 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKG-----------GFVSFIRG-RNLWVI 177 (741)
T ss_dssp SCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTS-----------SEEEEEET-TEEEEE
T ss_pred cceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCC-----------CEEEEEeC-CcEEEE
Confidence 789999999999998886 99999999988 55 3344567789999999 99888874 589999
Q ss_pred ECCCCC
Q 036317 89 SARSGK 94 (106)
Q Consensus 89 d~~~~~ 94 (106)
|+.+++
T Consensus 178 d~~~g~ 183 (741)
T 2ecf_A 178 DLASGR 183 (741)
T ss_dssp ETTTTE
T ss_pred ecCCCC
Confidence 999876
No 139
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.96 E-value=1.7e-08 Score=70.56 Aligned_cols=81 Identities=16% Similarity=0.317 Sum_probs=62.5
Q ss_pred CCeeEEEECCCCCeEEEEe-CCCeEEEEEcCCCce---------eccCCCcEEEEEecCCcceeeeeeecccEEEEecC-
Q 036317 13 SDANEVKLSNDGRLMLLTT-LEGHIHVLHSFQGTL---------PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSG- 81 (106)
Q Consensus 13 ~~v~~v~~spdg~~l~~~~-~~~~i~l~d~~~~~~---------~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~- 81 (106)
.....++|+|||++++++. .++.+.+||..++++ ......+..+.|+||| ++|+.++.
T Consensus 211 ~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg-----------~~l~v~~~~ 279 (361)
T 3scy_A 211 SGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDG-----------KYLYASNRL 279 (361)
T ss_dssp CCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTS-----------SEEEEEECS
T ss_pred CCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCC-----------CEEEEECCC
Confidence 4678999999999888777 689999999987765 1112334579999999 88866554
Q ss_pred -CCcEEEEECC--CCC-----------CCcEEEeCCC
Q 036317 82 -DGSVYAWSAR--SGK-----------EPPVIKWAPG 104 (106)
Q Consensus 82 -d~~i~~wd~~--~~~-----------~v~~i~~sp~ 104 (106)
++.|.+|++. +++ .++.++|+|+
T Consensus 280 ~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spd 316 (361)
T 3scy_A 280 KADGVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPN 316 (361)
T ss_dssp SSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEECTT
T ss_pred CCCEEEEEEEcCCCCcEEEeeEecCCCCCceEEECCC
Confidence 4899999995 454 5778889886
No 140
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.95 E-value=2.9e-09 Score=71.08 Aligned_cols=84 Identities=17% Similarity=0.142 Sum_probs=62.1
Q ss_pred CCCCCeeEEEECCCCCeEEEEe-CCCeEEEEEcC--CCce---eccCCCcEEEEEecCCcceeeeeeecccEEEEecCC-
Q 036317 10 GDVSDANEVKLSNDGRLMLLTT-LEGHIHVLHSF--QGTL---PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGD- 82 (106)
Q Consensus 10 ~~~~~v~~v~~spdg~~l~~~~-~~~~i~l~d~~--~~~~---~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d- 82 (106)
.+...+..++|+|||++++.++ .++.+++|+.. .+.. ..+...+..+.|+|++ ++|+.++.+
T Consensus 170 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg-----------~~l~~~~~~~ 238 (297)
T 2ojh_A 170 HGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSG-----------DKVVFVSYDA 238 (297)
T ss_dssp CSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTS-----------SEEEEEEEET
T ss_pred cCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCC-----------CEEEEEEcCC
Confidence 3445799999999999888776 48888998865 3333 2233345578999999 888877765
Q ss_pred ----------CcEEEEECCCCC------------CCcEEEeCCC
Q 036317 83 ----------GSVYAWSARSGK------------EPPVIKWAPG 104 (106)
Q Consensus 83 ----------~~i~~wd~~~~~------------~v~~i~~sp~ 104 (106)
+.|++||+++++ .+.+++|+|+
T Consensus 239 ~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spd 282 (297)
T 2ojh_A 239 DVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPD 282 (297)
T ss_dssp TCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTT
T ss_pred CCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCC
Confidence 569999999876 4556677775
No 141
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.95 E-value=6.6e-10 Score=82.64 Aligned_cols=68 Identities=15% Similarity=0.015 Sum_probs=57.8
Q ss_pred eEEEECCCCCeEEEEeCC----CeEEEEEcCCCce---eccCCCcEEEEEecCCcceeeeeeecccEEEEecCCC--cEE
Q 036317 16 NEVKLSNDGRLMLLTTLE----GHIHVLHSFQGTL---PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDG--SVY 86 (106)
Q Consensus 16 ~~v~~spdg~~l~~~~~~----~~i~l~d~~~~~~---~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~--~i~ 86 (106)
.+++|||||++++.++.+ ..+++||+.+++. ..+.+.+..++||||| ++|++++.++ .|+
T Consensus 153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG-----------~~l~~~~~~~~~~i~ 221 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGM-----------KVTAGLETAREARLV 221 (582)
T ss_dssp CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTS-----------CEEEEEECSSCEEEE
T ss_pred ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecCCCccccceECCCC-----------CEEEEccCCCeeEEE
Confidence 689999999999988776 7899999988877 3344556789999999 9999888888 899
Q ss_pred EEECCCCC
Q 036317 87 AWSARSGK 94 (106)
Q Consensus 87 ~wd~~~~~ 94 (106)
+||+++++
T Consensus 222 ~~d~~~~~ 229 (582)
T 3o4h_A 222 TVDPRDGS 229 (582)
T ss_dssp EECTTTCC
T ss_pred EEcCCCCc
Confidence 99999876
No 142
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.92 E-value=7.8e-10 Score=83.60 Aligned_cols=79 Identities=14% Similarity=0.154 Sum_probs=63.4
Q ss_pred CeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce----eccCC---CcEEEEEecCCcceeeeeeecccEEEEecCC----
Q 036317 14 DANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL----PVSHN---STLEASFSQHLSLVALSVLILRSWVLEGSGD---- 82 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~----~~~~~---~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d---- 82 (106)
.+.+++|+|||+++++ +.++++++||..+++. ..+.. .+..++||||| ++|++++.+
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg-----------~~l~~~~~~~~~~ 85 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDR-----------EYALFSYNVEPIY 85 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTS-----------SEEEEEESCCCCS
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCC-----------CEEEEEecCccce
Confidence 5788999999997665 7899999999998876 22221 36789999999 888888664
Q ss_pred -----CcEEEEECCCCC------------CCcEEEeCCC
Q 036317 83 -----GSVYAWSARSGK------------EPPVIKWAPG 104 (106)
Q Consensus 83 -----~~i~~wd~~~~~------------~v~~i~~sp~ 104 (106)
+.+++||+++++ .+..++|||+
T Consensus 86 ~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPd 124 (723)
T 1xfd_A 86 QHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPK 124 (723)
T ss_dssp SSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSS
T ss_pred eecceeeEEEEECCCCceEeccCCccccccccccEECCC
Confidence 788899999886 2677889986
No 143
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.90 E-value=1.1e-08 Score=70.41 Aligned_cols=76 Identities=11% Similarity=-0.049 Sum_probs=61.5
Q ss_pred CCeeEEEECC-CCCeEEEEeCCCeEEEEEcCCCce---eccCCCcEEEEEecCCcceeeeeeecccEEEEecCCCcEEEE
Q 036317 13 SDANEVKLSN-DGRLMLLTTLEGHIHVLHSFQGTL---PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSVYAW 88 (106)
Q Consensus 13 ~~v~~v~~sp-dg~~l~~~~~~~~i~l~d~~~~~~---~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~~w 88 (106)
..+..++|+| ||++++++ ++.+.+||..+++. ......+..++|+||+ ++|++++.++.|++|
T Consensus 255 ~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg-----------~~l~~~~~~~~v~v~ 321 (349)
T 1jmx_B 255 ELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLDHTYYCVAFDKKG-----------DKLYLGGTFNDLAVF 321 (349)
T ss_dssp SCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECSSS-----------SCEEEESBSSEEEEE
T ss_pred CcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCCCCccceEECCCC-----------CEEEEecCCCeEEEE
Confidence 3677899999 99988887 88999999999886 1122345679999999 888888889999999
Q ss_pred ECCCCCCCcEEEe
Q 036317 89 SARSGKEPPVIKW 101 (106)
Q Consensus 89 d~~~~~~v~~i~~ 101 (106)
|+++++.+..+..
T Consensus 322 d~~~~~~~~~~~~ 334 (349)
T 1jmx_B 322 NPDTLEKVKNIKL 334 (349)
T ss_dssp ETTTTEEEEEEEC
T ss_pred eccccceeeeeec
Confidence 9999886655544
No 144
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.88 E-value=2e-08 Score=68.96 Aligned_cols=79 Identities=10% Similarity=0.106 Sum_probs=61.9
Q ss_pred CeeEEEECCCCCeEEEEeC-CCeEEEEEcCCCce----eccCCCcEE-EEEecCCcceeeeeeecccEEEEecCCC---c
Q 036317 14 DANEVKLSNDGRLMLLTTL-EGHIHVLHSFQGTL----PVSHNSTLE-ASFSQHLSLVALSVLILRSWVLEGSGDG---S 84 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~~~~-~~~i~l~d~~~~~~----~~~~~~~~~-~~fs~d~~~~~~~~~~~~~~i~t~s~d~---~ 84 (106)
.+ .++|+|||+++++++. ++.+.+||..+++. ......... ++|+||+ ++++++..++ .
T Consensus 42 ~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg-----------~~l~~~~~~~~~~~ 109 (331)
T 3u4y_A 42 FV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDD-----------QFAVTVTGLNHPFN 109 (331)
T ss_dssp EE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTS-----------SEEEECCCSSSSCE
T ss_pred cc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCC-----------CEEEEecCCCCccc
Confidence 45 9999999998877665 88999999998875 122233445 8999999 9888666553 8
Q ss_pred EEEEECCCCC---------CCcEEEeCCC
Q 036317 85 VYAWSARSGK---------EPPVIKWAPG 104 (106)
Q Consensus 85 i~~wd~~~~~---------~v~~i~~sp~ 104 (106)
|++||+++++ .+..++|+|+
T Consensus 110 i~v~d~~~~~~~~~~~~~~~~~~~~~spd 138 (331)
T 3u4y_A 110 MQSYSFLKNKFISTIPIPYDAVGIAISPN 138 (331)
T ss_dssp EEEEETTTTEEEEEEECCTTEEEEEECTT
T ss_pred EEEEECCCCCeEEEEECCCCccceEECCC
Confidence 9999999887 5678888886
No 145
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.87 E-value=2.9e-08 Score=68.42 Aligned_cols=82 Identities=16% Similarity=0.179 Sum_probs=62.3
Q ss_pred CCCeeEEEECCCCCeEEEEeC-CCeEEEEEcCCCce--eccCCCcEEEEEecCCcceeeeeeecccEEE-EecCCCcEEE
Q 036317 12 VSDANEVKLSNDGRLMLLTTL-EGHIHVLHSFQGTL--PVSHNSTLEASFSQHLSLVALSVLILRSWVL-EGSGDGSVYA 87 (106)
Q Consensus 12 ~~~v~~v~~spdg~~l~~~~~-~~~i~l~d~~~~~~--~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~-t~s~d~~i~~ 87 (106)
...+..++|+|||++++++.. ++.+.+||..+++. .........+.|+||+ ++++ +...++.|.+
T Consensus 230 ~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~s~dg-----------~~l~v~~~~~~~v~~ 298 (353)
T 3vgz_A 230 EHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPESLAVLFNPAR-----------NEAYVTHRQAGKVSV 298 (353)
T ss_dssp CCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSCCCEEEETTT-----------TEEEEEETTTTEEEE
T ss_pred CcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCceEEECCCC-----------CEEEEEECCCCeEEE
Confidence 346778999999998877765 49999999998887 1111223458999999 8554 4457899999
Q ss_pred EECCCCC---------CCcEEEeCCC
Q 036317 88 WSARSGK---------EPPVIKWAPG 104 (106)
Q Consensus 88 wd~~~~~---------~v~~i~~sp~ 104 (106)
||+++++ .+..++|+|+
T Consensus 299 ~d~~~~~~~~~~~~~~~~~~~~~s~d 324 (353)
T 3vgz_A 299 IDAKSYKVVKTFDTPTHPNSLALSAD 324 (353)
T ss_dssp EETTTTEEEEEEECCSEEEEEEECTT
T ss_pred EECCCCeEEEEEecCCCCCeEEEcCC
Confidence 9999887 5677788875
No 146
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.85 E-value=4.6e-08 Score=67.37 Aligned_cols=81 Identities=12% Similarity=0.268 Sum_probs=63.6
Q ss_pred CCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce----ec----cCCCcEEEEEecCCcceeeeeeecccEEEEecC-CC
Q 036317 13 SDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL----PV----SHNSTLEASFSQHLSLVALSVLILRSWVLEGSG-DG 83 (106)
Q Consensus 13 ~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~----~~----~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~-d~ 83 (106)
..+..++|+|||++++++..++.+.+||..+++. .. ....+..++|+||+ ++++.++. ++
T Consensus 185 ~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg-----------~~l~~~~~~~~ 253 (353)
T 3vgz_A 185 KMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTAR-----------QRAFITDSKAA 253 (353)
T ss_dssp TTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTT-----------TEEEEEESSSS
T ss_pred CccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCC-----------CEEEEEeCCCC
Confidence 3578899999999999999999999999999877 11 23345678999999 87666554 58
Q ss_pred cEEEEECCCCC--------CCcEEEeCCC
Q 036317 84 SVYAWSARSGK--------EPPVIKWAPG 104 (106)
Q Consensus 84 ~i~~wd~~~~~--------~v~~i~~sp~ 104 (106)
.|++||+++++ ....+.|+|+
T Consensus 254 ~v~~~d~~~~~~~~~~~~~~~~~~~~s~d 282 (353)
T 3vgz_A 254 EVLVVDTRNGNILAKVAAPESLAVLFNPA 282 (353)
T ss_dssp EEEEEETTTCCEEEEEECSSCCCEEEETT
T ss_pred EEEEEECCCCcEEEEEEcCCCceEEECCC
Confidence 99999999988 3345667665
No 147
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.84 E-value=2.7e-08 Score=67.89 Aligned_cols=80 Identities=15% Similarity=0.142 Sum_probs=62.0
Q ss_pred CeeEEEECCCCCeEEEE-eCCCeEEEEEcCCCce----eccC-----CCcEEEEEecCCcceeeeeeecccEEEEec---
Q 036317 14 DANEVKLSNDGRLMLLT-TLEGHIHVLHSFQGTL----PVSH-----NSTLEASFSQHLSLVALSVLILRSWVLEGS--- 80 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~~-~~~~~i~l~d~~~~~~----~~~~-----~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s--- 80 (106)
.+..++|+|||++++++ ..++.+.+||..+++. .... ..+..+.|+||| ++++.++
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg-----------~~l~~~~~~~ 103 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDG-----------KTLAIYESPV 103 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTS-----------SEEEEEEEEE
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCC-----------CEEEEEeccc
Confidence 47899999999877554 5678999999998876 1111 145568999999 8877775
Q ss_pred ---------CCCcEEEEECCCCC---------CCcEEEeCCC
Q 036317 81 ---------GDGSVYAWSARSGK---------EPPVIKWAPG 104 (106)
Q Consensus 81 ---------~d~~i~~wd~~~~~---------~v~~i~~sp~ 104 (106)
.++.|++||+++++ .+..+.|+|+
T Consensus 104 ~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~d 145 (337)
T 1pby_B 104 RLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARD 145 (337)
T ss_dssp EECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTT
T ss_pred ccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCC
Confidence 57899999999876 5677888876
No 148
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.83 E-value=1.4e-08 Score=76.82 Aligned_cols=68 Identities=15% Similarity=0.137 Sum_probs=55.7
Q ss_pred eeEEEECCCCCeEEEEe---------------------------------CCCeEEEEEcCCCce---e---ccCCCcEE
Q 036317 15 ANEVKLSNDGRLMLLTT---------------------------------LEGHIHVLHSFQGTL---P---VSHNSTLE 55 (106)
Q Consensus 15 v~~v~~spdg~~l~~~~---------------------------------~~~~i~l~d~~~~~~---~---~~~~~~~~ 55 (106)
+.++.|||||++++.++ .+..+++||+.+++. . .+...+..
T Consensus 183 ~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 262 (706)
T 2z3z_A 183 EKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTN 262 (706)
T ss_dssp CCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEE
T ss_pred CceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEee
Confidence 68999999999999887 447899999998876 1 12334567
Q ss_pred EEEecCCcceeeeeeecccEEEEecCCC-----cEEEEECCCC
Q 036317 56 ASFSQHLSLVALSVLILRSWVLEGSGDG-----SVYAWSARSG 93 (106)
Q Consensus 56 ~~fs~d~~~~~~~~~~~~~~i~t~s~d~-----~i~~wd~~~~ 93 (106)
+.|+||| ++|++++.++ .|++||++++
T Consensus 263 ~~~spdg-----------~~l~~~~~~~~~~~~~v~~~d~~~g 294 (706)
T 2z3z_A 263 LSWSPDE-----------NILYVAEVNRAQNECKVNAYDAETG 294 (706)
T ss_dssp EEECTTS-----------SEEEEEEECTTSCEEEEEEEETTTC
T ss_pred EEEECCC-----------CEEEEEEeCCCCCeeEEEEEECCCC
Confidence 9999999 8888877665 9999999998
No 149
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.81 E-value=3.1e-08 Score=74.26 Aligned_cols=70 Identities=11% Similarity=0.095 Sum_probs=59.4
Q ss_pred CeeEEEECCCCCeEEEEeCCCeEEEEEc--CCCce---eccCCCcEEEEEec----CCcceeeeeeecccEEEEecC-CC
Q 036317 14 DANEVKLSNDGRLMLLTTLEGHIHVLHS--FQGTL---PVSHNSTLEASFSQ----HLSLVALSVLILRSWVLEGSG-DG 83 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~~~~~~~i~l~d~--~~~~~---~~~~~~~~~~~fs~----d~~~~~~~~~~~~~~i~t~s~-d~ 83 (106)
.+..++|||||+++++++.++.|.+||. .+++. ......+..++|+| || ++++++++ ++
T Consensus 180 ~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~p~~va~sp~~~~dg-----------~~l~v~~~~~~ 248 (543)
T 1nir_A 180 AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYED-----------RYTIAGAYWPP 248 (543)
T ss_dssp TEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTT-----------TEEEEEEEESS
T ss_pred ccceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCCCcceEEeCCCcCCCC-----------CEEEEEEccCC
Confidence 3789999999999999999999999999 77766 11233456799999 99 99988885 79
Q ss_pred cEEEEECCCCC
Q 036317 84 SVYAWSARSGK 94 (106)
Q Consensus 84 ~i~~wd~~~~~ 94 (106)
+|.+||..+++
T Consensus 249 ~v~v~D~~t~~ 259 (543)
T 1nir_A 249 QFAIMDGETLE 259 (543)
T ss_dssp EEEEEETTTCC
T ss_pred eEEEEeccccc
Confidence 99999999887
No 150
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.79 E-value=9.3e-08 Score=66.78 Aligned_cols=79 Identities=14% Similarity=0.290 Sum_probs=58.4
Q ss_pred CCeeEEEECCCCCeEEEEeCC--CeEEEEEcC--CCce-----eccCCCcEEEEEecCCcceeeeeeecccEEEEec-CC
Q 036317 13 SDANEVKLSNDGRLMLLTTLE--GHIHVLHSF--QGTL-----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGS-GD 82 (106)
Q Consensus 13 ~~v~~v~~spdg~~l~~~~~~--~~i~l~d~~--~~~~-----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s-~d 82 (106)
.....++|+|||++++++..+ +.+.+|++. +++. ......+..++|+||| ++|+.++ .+
T Consensus 259 ~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spdg-----------~~l~~~~~~~ 327 (361)
T 3scy_A 259 QGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPNG-----------KYLLVACRDT 327 (361)
T ss_dssp CCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEECTTS-----------CEEEEEETTT
T ss_pred CCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCCCCceEEECCCC-----------CEEEEEECCC
Confidence 356799999999998777654 899999985 5654 1112345679999999 9888776 56
Q ss_pred CcEEEE--ECCCCC-----------CCcEEEeC
Q 036317 83 GSVYAW--SARSGK-----------EPPVIKWA 102 (106)
Q Consensus 83 ~~i~~w--d~~~~~-----------~v~~i~~s 102 (106)
+.|.+| |.++|+ .+.|+.|.
T Consensus 328 ~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 328 NVIQIFERDQATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp TEEEEEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred CCEEEEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence 899995 555676 56777774
No 151
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.79 E-value=7.3e-08 Score=65.89 Aligned_cols=80 Identities=11% Similarity=0.160 Sum_probs=58.6
Q ss_pred CeeEEEECCCCCeEEEEe-CCCeEEEEEcC--CCce-----eccCCCcEEEEEecCCcceeeeeeecccEEEEec-CCCc
Q 036317 14 DANEVKLSNDGRLMLLTT-LEGHIHVLHSF--QGTL-----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGS-GDGS 84 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~~~-~~~~i~l~d~~--~~~~-----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s-~d~~ 84 (106)
.+..++|+|||++++++. .++.+.+||.. +++. ......+..++|+||+ ++++.++ .++.
T Consensus 232 ~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg-----------~~l~~~~~~~~~ 300 (343)
T 1ri6_A 232 WAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSG-----------KYLIAAGQKSHH 300 (343)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTS-----------SEEEEECTTTCE
T ss_pred CccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCCC-----------CEEEEecCCCCe
Confidence 566899999999887555 78999999987 3433 1122336679999999 8877776 6799
Q ss_pred EEEE--ECCCCC-----------CCcEEEeCCC
Q 036317 85 VYAW--SARSGK-----------EPPVIKWAPG 104 (106)
Q Consensus 85 i~~w--d~~~~~-----------~v~~i~~sp~ 104 (106)
|.+| |.++|+ .+.+++|.|.
T Consensus 301 v~v~~~d~~~g~~~~~~~~~~g~~p~~i~~~~~ 333 (343)
T 1ri6_A 301 ISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNAH 333 (343)
T ss_dssp EEEEEEETTTTEEEEEEEEECSSSCCEEEEEEE
T ss_pred EEEEEEcCCCceeeEccccccCCCCeeEEEEcc
Confidence 9999 544664 5666666653
No 152
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.79 E-value=1.9e-08 Score=69.82 Aligned_cols=67 Identities=12% Similarity=0.063 Sum_probs=52.8
Q ss_pred CCeeEEEECCCCCeEEEEeC---CCeEEEEEcCCCce------eccCCCcEEEEEecCCcceeeeeeecccEEEEec-CC
Q 036317 13 SDANEVKLSNDGRLMLLTTL---EGHIHVLHSFQGTL------PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGS-GD 82 (106)
Q Consensus 13 ~~v~~v~~spdg~~l~~~~~---~~~i~l~d~~~~~~------~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s-~d 82 (106)
.....++|+|||+ +++++. ++.+.+||+.+++. ......+..++|+||| +++++++ .+
T Consensus 40 ~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg-----------~~l~~~~~~~ 107 (347)
T 3hfq_A 40 QNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEAR-----------QLVYSANYHK 107 (347)
T ss_dssp SCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTT-----------TEEEEEETTT
T ss_pred CCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCC-----------CEEEEEeCCC
Confidence 4567899999999 665554 58999999987764 1234456779999999 9888777 67
Q ss_pred CcEEEEECC
Q 036317 83 GSVYAWSAR 91 (106)
Q Consensus 83 ~~i~~wd~~ 91 (106)
+.|.+|++.
T Consensus 108 ~~v~v~~~~ 116 (347)
T 3hfq_A 108 GTAEVMKIA 116 (347)
T ss_dssp TEEEEEEEC
T ss_pred CEEEEEEeC
Confidence 899999996
No 153
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=98.78 E-value=2.1e-08 Score=76.96 Aligned_cols=67 Identities=16% Similarity=0.092 Sum_probs=55.0
Q ss_pred eEEEECCCCCeEEEEeCC---------CeEEEEEcCCCce---eccCCCcEEEEEecCCcceeeeeeecccEEEEecCCC
Q 036317 16 NEVKLSNDGRLMLLTTLE---------GHIHVLHSFQGTL---PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDG 83 (106)
Q Consensus 16 ~~v~~spdg~~l~~~~~~---------~~i~l~d~~~~~~---~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~ 83 (106)
.+++|||||++++.++.+ +.+.+||+.+++. ..+.+.+..++||||| +.|+.++ ++
T Consensus 65 ~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG-----------~~la~~~-~~ 132 (740)
T 4a5s_A 65 NDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVG-----------HKLAYVW-NN 132 (740)
T ss_dssp CEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCTTEEEEEECSST-----------TCEEEEE-TT
T ss_pred cceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEcccCCCcceeeEECCCC-----------CEEEEEE-CC
Confidence 458999999999998876 5567999999987 2344567789999999 8888874 67
Q ss_pred cEEEEECCCCC
Q 036317 84 SVYAWSARSGK 94 (106)
Q Consensus 84 ~i~~wd~~~~~ 94 (106)
.|++|++.+++
T Consensus 133 ~i~~~~~~~~~ 143 (740)
T 4a5s_A 133 DIYVKIEPNLP 143 (740)
T ss_dssp EEEEESSTTSC
T ss_pred eEEEEECCCCc
Confidence 99999998876
No 154
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=98.78 E-value=6e-09 Score=79.00 Aligned_cols=78 Identities=13% Similarity=0.166 Sum_probs=61.1
Q ss_pred eeEEEECCCCCeEEEEeCCCeEEEEEcCCCce---eccC----CCcEEEEEecCCcceeeeeeecccEEEEecC------
Q 036317 15 ANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL---PVSH----NSTLEASFSQHLSLVALSVLILRSWVLEGSG------ 81 (106)
Q Consensus 15 v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~---~~~~----~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~------ 81 (106)
-.+++|+|||+ ++.++.++++++||..+++. ...+ ..+..++||||| ++|++++.
T Consensus 18 ~~~~~~s~dg~-~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg-----------~~la~~~~~~~~~~ 85 (719)
T 1z68_A 18 TFFPNWISGQE-YLHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDR-----------QFVYLESDYSKLWR 85 (719)
T ss_dssp CCCCEESSSSE-EEEECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTS-----------SEEEEEEEEEECSS
T ss_pred CCccEECCCCe-EEEEcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCC-----------CeEEEEecCceeEE
Confidence 34789999996 45556799999999999886 1111 136689999999 88887765
Q ss_pred ---CCcEEEEECCCCC---------CCcEEEeCCC
Q 036317 82 ---DGSVYAWSARSGK---------EPPVIKWAPG 104 (106)
Q Consensus 82 ---d~~i~~wd~~~~~---------~v~~i~~sp~ 104 (106)
++.|++||+++++ .+..++|||+
T Consensus 86 ~s~~~~i~~~d~~~g~~~~~~~l~~~~~~~~~SPD 120 (719)
T 1z68_A 86 YSYTATYYIYDLSNGEFVRGNELPRPIQYLCWSPV 120 (719)
T ss_dssp SCEEEEEEEEETTTTEECCSSCCCSSBCCEEECSS
T ss_pred eecceEEEEEECCCCccccceecCcccccceECCC
Confidence 6899999998876 3677899996
No 155
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.78 E-value=2.9e-08 Score=75.02 Aligned_cols=66 Identities=14% Similarity=0.051 Sum_probs=53.3
Q ss_pred CCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce---eccCCCcEEEEEecCCcceeeeeeecccEEEEecCCCcEEEEE
Q 036317 13 SDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL---PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSVYAWS 89 (106)
Q Consensus 13 ~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~---~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~~wd 89 (106)
..|.+++|||| ++++.+. ++.+++||..+++. ......+..+.||||| ++|+++ .|+.|++||
T Consensus 82 ~~v~~~~~spd-~~~~~~~-~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG-----------~~la~~-~~~~i~v~~ 147 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFT-QGGLVGFDMLARKVTYLFDTNEETASLDFSPVG-----------DRVAYV-RNHNLYIAR 147 (706)
T ss_dssp CCCEEEEETTT-TEEEEEE-TTEEEEEETTTTEEEEEECCTTCCTTCEECTTS-----------SEEEEE-ETTEEEEEE
T ss_pred cCceeEEECCC-CeEEEEE-CCEEEEEECCCCceEEccCCcccccCCcCCCCC-----------CEEEEE-ECCeEEEEe
Confidence 46999999999 6666654 59999999998876 2233445668999999 888885 678999999
Q ss_pred CCC
Q 036317 90 ARS 92 (106)
Q Consensus 90 ~~~ 92 (106)
+.+
T Consensus 148 ~~~ 150 (706)
T 2z3z_A 148 GGK 150 (706)
T ss_dssp CBC
T ss_pred cCc
Confidence 998
No 156
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.77 E-value=4.2e-08 Score=77.85 Aligned_cols=83 Identities=7% Similarity=0.014 Sum_probs=69.6
Q ss_pred CCCC-CeeEEEECCCCCeEEEEeCCCeEE-EEEcCCCce---eccCCCcEEEEEecCCcceeeeeeecccEEEEecCCCc
Q 036317 10 GDVS-DANEVKLSNDGRLMLLTTLEGHIH-VLHSFQGTL---PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGS 84 (106)
Q Consensus 10 ~~~~-~v~~v~~spdg~~l~~~~~~~~i~-l~d~~~~~~---~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~ 84 (106)
.+.+ .+..++|+ ||+.++.++.+..+. +||..+++. ..+...+..++||||| ++|++++.++.
T Consensus 334 ~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG-----------~~la~~~~~~~ 401 (1045)
T 1k32_A 334 EPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNG-----------KFAVVANDRFE 401 (1045)
T ss_dssp CCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTS-----------SEEEEEETTSE
T ss_pred CCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceEecCCccceeeeEECCCC-----------CEEEEECCCCe
Confidence 4445 78899999 999999988888888 899887765 3233456789999999 99999999999
Q ss_pred EEEEECCCCC----------CCcEEEeCCC
Q 036317 85 VYAWSARSGK----------EPPVIKWAPG 104 (106)
Q Consensus 85 i~~wd~~~~~----------~v~~i~~sp~ 104 (106)
|++||+++++ .+..++|+|+
T Consensus 402 v~~~d~~tg~~~~~~~~~~~~v~~~~~SpD 431 (1045)
T 1k32_A 402 IMTVDLETGKPTVIERSREAMITDFTISDN 431 (1045)
T ss_dssp EEEEETTTCCEEEEEECSSSCCCCEEECTT
T ss_pred EEEEECCCCceEEeccCCCCCccceEECCC
Confidence 9999999887 5688999986
No 157
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.77 E-value=3e-08 Score=68.11 Aligned_cols=80 Identities=14% Similarity=0.059 Sum_probs=61.2
Q ss_pred CeeEEEECCCCCeEEEE-eCCCeEEEEEcCCCce----eccC------CCcEEEEEecCCcceeeeeeecccEEEEecCC
Q 036317 14 DANEVKLSNDGRLMLLT-TLEGHIHVLHSFQGTL----PVSH------NSTLEASFSQHLSLVALSVLILRSWVLEGSGD 82 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~~-~~~~~i~l~d~~~~~~----~~~~------~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d 82 (106)
.+..++|+|||++++++ ..++.+.+||..+++. .... ..+..+.|+||| +++++++.+
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg-----------~~l~~~~~~ 112 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDG-----------KEVYATVNP 112 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTS-----------SEEEEEEEE
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCC-----------CEEEEEccc
Confidence 57899999999977554 4689999999998876 1111 124568999999 888877754
Q ss_pred ------------CcEEEEECCCCC------------CCcEEEeCCC
Q 036317 83 ------------GSVYAWSARSGK------------EPPVIKWAPG 104 (106)
Q Consensus 83 ------------~~i~~wd~~~~~------------~v~~i~~sp~ 104 (106)
+.|++||+++++ .+.+++|+|+
T Consensus 113 ~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~d 158 (349)
T 1jmx_B 113 TQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADD 158 (349)
T ss_dssp EEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTT
T ss_pred ccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCC
Confidence 899999998843 4667778875
No 158
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.77 E-value=1.1e-07 Score=65.88 Aligned_cols=82 Identities=15% Similarity=0.264 Sum_probs=61.8
Q ss_pred CCCeeEEEECCCCCeEEEEe-CCCeEEEEEcC-CCce-----ecc----------CCCcEEEEEecCCcceeeeeeeccc
Q 036317 12 VSDANEVKLSNDGRLMLLTT-LEGHIHVLHSF-QGTL-----PVS----------HNSTLEASFSQHLSLVALSVLILRS 74 (106)
Q Consensus 12 ~~~v~~v~~spdg~~l~~~~-~~~~i~l~d~~-~~~~-----~~~----------~~~~~~~~fs~d~~~~~~~~~~~~~ 74 (106)
...+..++|+|||+++++++ .++.+.+||+. +++. ... ...+..++|+||| +
T Consensus 85 ~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg-----------~ 153 (347)
T 3hfq_A 85 GTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDN-----------R 153 (347)
T ss_dssp SCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTS-----------C
T ss_pred CCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCC-----------c
Confidence 34788999999999998887 77999999985 4443 111 1125569999999 8
Q ss_pred EEEEecCCCcEEEEECC-CCC-------------CCcEEEeCCC
Q 036317 75 WVLEGSGDGSVYAWSAR-SGK-------------EPPVIKWAPG 104 (106)
Q Consensus 75 ~i~t~s~d~~i~~wd~~-~~~-------------~v~~i~~sp~ 104 (106)
.+++...++.|++|+++ +++ .++.++|+|+
T Consensus 154 l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spd 197 (347)
T 3hfq_A 154 LAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPD 197 (347)
T ss_dssp EEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTT
T ss_pred EEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCC
Confidence 77777778899999998 554 3456788886
No 159
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.75 E-value=2.4e-08 Score=74.88 Aligned_cols=73 Identities=10% Similarity=0.049 Sum_probs=62.0
Q ss_pred EECCCCCeEEEEeCCCeEEEEEcCCCce----eccCCCcEEEEEecCCcceeeeeeecccEEEEecCCCcEEEEEC--CC
Q 036317 19 KLSNDGRLMLLTTLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSVYAWSA--RS 92 (106)
Q Consensus 19 ~~spdg~~l~~~~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~~wd~--~~ 92 (106)
.++|+++.+++...++++.+||..++++ ...+. +..+.|+||| +++++++.|++|++||+ ++
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg-----------~~l~v~~~d~~V~v~D~~~~t 211 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASG-----------RYLLVIGRDARIDMIDLWAKE 211 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTS-----------CEEEEEETTSEEEEEETTSSS
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCC-----------CEEEEECCCCeEEEEECcCCC
Confidence 3899999889999999999999999987 21222 5568899999 99999999999999999 77
Q ss_pred CC---------CCcEEEeCC
Q 036317 93 GK---------EPPVIKWAP 103 (106)
Q Consensus 93 ~~---------~v~~i~~sp 103 (106)
++ .++.++|+|
T Consensus 212 ~~~~~~i~~g~~p~~va~sp 231 (543)
T 1nir_A 212 PTKVAEIKIGIEARSVESSK 231 (543)
T ss_dssp CEEEEEEECCSEEEEEEECC
T ss_pred CcEEEEEecCCCcceEEeCC
Confidence 76 567888988
No 160
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=98.74 E-value=4.5e-08 Score=75.10 Aligned_cols=79 Identities=16% Similarity=0.172 Sum_probs=61.2
Q ss_pred CCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce----eccCC-----CcEEEEEecCCcceeeeeeecccEEEEecCC-
Q 036317 13 SDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL----PVSHN-----STLEASFSQHLSLVALSVLILRSWVLEGSGD- 82 (106)
Q Consensus 13 ~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~----~~~~~-----~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d- 82 (106)
....++.|+|||++++++ +++|++||..+++. ..+.. ......||||| ++|+.++.+
T Consensus 17 ~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg-----------~~l~~~~~~~ 83 (740)
T 4a5s_A 17 LKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDG-----------QFILLEYNYV 83 (740)
T ss_dssp CCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTS-----------SEEEEEEEEE
T ss_pred ccccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCC-----------CEEEEEECCe
Confidence 357789999999988775 89999999999875 22211 11347899999 888877765
Q ss_pred --------CcEEEEECCCCC---------CCcEEEeCCC
Q 036317 83 --------GSVYAWSARSGK---------EPPVIKWAPG 104 (106)
Q Consensus 83 --------~~i~~wd~~~~~---------~v~~i~~sp~ 104 (106)
+.+++||+++++ .+...+|||+
T Consensus 84 ~~~r~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~~~SPd 122 (740)
T 4a5s_A 84 KQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPV 122 (740)
T ss_dssp ECSSSCEEEEEEEEETTTTEECCSSCCCTTEEEEEECSS
T ss_pred eeEEEccceEEEEEECCCCcEEEcccCCCcceeeEECCC
Confidence 567899999987 4678899996
No 161
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.73 E-value=4.8e-08 Score=68.43 Aligned_cols=66 Identities=11% Similarity=0.055 Sum_probs=53.4
Q ss_pred EEECCCCCeEEEEeC-CC--eEEEEEcCCCce---e-ccCCCcEEEEEecCCcceeeeeeecccEEEEecCCCcEEEEEC
Q 036317 18 VKLSNDGRLMLLTTL-EG--HIHVLHSFQGTL---P-VSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSVYAWSA 90 (106)
Q Consensus 18 v~~spdg~~l~~~~~-~~--~i~l~d~~~~~~---~-~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~~wd~ 90 (106)
.+|||||++++.++. ++ ++.+||..+++. . .+......+.|+||| +.|+.++.++.+++||+
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg-----------~~l~~~~~~~~l~~~d~ 109 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDD-----------DALFYVKDGRNLMRVDL 109 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTS-----------SEEEEEETTTEEEEEET
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCC-----------CEEEEEeCCCeEEEEEC
Confidence 789999999998887 55 488899988877 1 122222356899999 99999999999999999
Q ss_pred CCCC
Q 036317 91 RSGK 94 (106)
Q Consensus 91 ~~~~ 94 (106)
++++
T Consensus 110 ~~g~ 113 (388)
T 3pe7_A 110 ATLE 113 (388)
T ss_dssp TTCC
T ss_pred CCCc
Confidence 9987
No 162
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.72 E-value=1.6e-08 Score=75.11 Aligned_cols=70 Identities=4% Similarity=0.033 Sum_probs=56.2
Q ss_pred CCCCCeeEEEECCCCCeEEEEeCCC--eEEEEEcCCCcee---ccCCCcEEEE--------EecCCcceeeeeeecccEE
Q 036317 10 GDVSDANEVKLSNDGRLMLLTTLEG--HIHVLHSFQGTLP---VSHNSTLEAS--------FSQHLSLVALSVLILRSWV 76 (106)
Q Consensus 10 ~~~~~v~~v~~spdg~~l~~~~~~~--~i~l~d~~~~~~~---~~~~~~~~~~--------fs~d~~~~~~~~~~~~~~i 76 (106)
.+.+.+..++|||||++++++..++ +|++||..+++.. .+...+..+. |+||| +.+
T Consensus 192 ~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg-----------~~~ 260 (582)
T 3o4h_A 192 SGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVEDLELPSKDFSSYRPTAITWLGYLPDG-----------RLA 260 (582)
T ss_dssp CSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEEECCCSCSHHHHHCCSEEEEEEECTTS-----------CEE
T ss_pred cCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEEEccCCCcChhhhhhccccceeEcCCC-----------cEE
Confidence 4445789999999999999777888 8999999888762 2222223344 99999 999
Q ss_pred EEecCCCcEEEEEC
Q 036317 77 LEGSGDGSVYAWSA 90 (106)
Q Consensus 77 ~t~s~d~~i~~wd~ 90 (106)
++++.|+++++|++
T Consensus 261 ~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 261 VVARREGRSAVFID 274 (582)
T ss_dssp EEEEETTEEEEEET
T ss_pred EEEEcCCcEEEEEE
Confidence 99999999999998
No 163
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.71 E-value=1.2e-07 Score=67.35 Aligned_cols=74 Identities=19% Similarity=0.238 Sum_probs=60.0
Q ss_pred EEEECCCCCeEEEEeC-----------CCeEEEEEcCCCce----eccCCCcEEEEEecCCcceeeeeeecccEEEEecC
Q 036317 17 EVKLSNDGRLMLLTTL-----------EGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSG 81 (106)
Q Consensus 17 ~v~~spdg~~l~~~~~-----------~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~ 81 (106)
.++|+||+++++++.. .+++.+||..+++. +... +..+.|+||| +++++++.
T Consensus 258 ~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg-----------~~l~v~n~ 324 (361)
T 2oiz_A 258 LVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQR-----------NLMLTLDG 324 (361)
T ss_dssp CEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTT-----------TEEEEECS
T ss_pred EEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCC-----------CEEEEeCC
Confidence 3789999988877653 35899999999887 2233 7789999999 99988887
Q ss_pred CCcEEEEECCCC--C----------CCcEEEeCCC
Q 036317 82 DGSVYAWSARSG--K----------EPPVIKWAPG 104 (106)
Q Consensus 82 d~~i~~wd~~~~--~----------~v~~i~~sp~ 104 (106)
++|.+||++++ + .++.+.++|+
T Consensus 325 -~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~ 358 (361)
T 2oiz_A 325 -GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPV 358 (361)
T ss_dssp -SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCC
T ss_pred -CeEEEEECCCCcceeeEEeccCCCCcEEEEecCC
Confidence 89999999999 5 4567777775
No 164
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.67 E-value=3.9e-08 Score=73.81 Aligned_cols=81 Identities=11% Similarity=0.024 Sum_probs=61.9
Q ss_pred CCeeEEEECCCCCeEEEEeCC----------CeEEEEEcCC------Cce---e-ccCCCcEEEEEecCCcceeeeeeec
Q 036317 13 SDANEVKLSNDGRLMLLTTLE----------GHIHVLHSFQ------GTL---P-VSHNSTLEASFSQHLSLVALSVLIL 72 (106)
Q Consensus 13 ~~v~~v~~spdg~~l~~~~~~----------~~i~l~d~~~------~~~---~-~~~~~~~~~~fs~d~~~~~~~~~~~ 72 (106)
..+..++|||||+.|+.++.+ .++++||..+ ++. . ........++|||||
T Consensus 130 ~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG---------- 199 (662)
T 3azo_A 130 LRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDG---------- 199 (662)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTS----------
T ss_pred ccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCC----------
Confidence 467899999999999988876 5899999987 555 2 233344568999999
Q ss_pred ccEEEEecCC--------CcEEEEECC-CC---C----------CCcEEEeCCC
Q 036317 73 RSWVLEGSGD--------GSVYAWSAR-SG---K----------EPPVIKWAPG 104 (106)
Q Consensus 73 ~~~i~t~s~d--------~~i~~wd~~-~~---~----------~v~~i~~sp~ 104 (106)
++|+..+.+ ..|++||++ +| + .+..+.|+|+
T Consensus 200 -~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spd 252 (662)
T 3azo_A 200 -RQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPD 252 (662)
T ss_dssp -SEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTT
T ss_pred -CEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCC
Confidence 888776644 379999999 57 3 4567788875
No 165
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.64 E-value=1.2e-07 Score=72.33 Aligned_cols=70 Identities=7% Similarity=0.011 Sum_probs=54.0
Q ss_pred CeeEEEECCCCCeEEEEeCCC-----eEEEEEcCCCcee---ccCCCcEEEEEecCCcceeeeeeecccEEEEecCCCc-
Q 036317 14 DANEVKLSNDGRLMLLTTLEG-----HIHVLHSFQGTLP---VSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGS- 84 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~~~~~~-----~i~l~d~~~~~~~---~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~- 84 (106)
.+..++|||||++++.+..++ +|++||+.+++.. .....+..++|+||| +.|+.++.++.
T Consensus 126 ~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg-----------~~l~~~~~~~~~ 194 (710)
T 2xdw_A 126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDG-----------KGMFYNAYPQQD 194 (710)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTS-----------SEEEEEECCCCS
T ss_pred EEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceEEEEeCC-----------CEEEEEEECCcc
Confidence 578999999999998776543 8999999999871 111123458999999 87777766655
Q ss_pred ---------------EEEEECCCCC
Q 036317 85 ---------------VYAWSARSGK 94 (106)
Q Consensus 85 ---------------i~~wd~~~~~ 94 (106)
|++|++.+++
T Consensus 195 ~~~~~~~~~~~~~~~v~~~~l~t~~ 219 (710)
T 2xdw_A 195 GKSDGTETSTNLHQKLYYHVLGTDQ 219 (710)
T ss_dssp SCCSSSCCCCCCCCEEEEEETTSCG
T ss_pred ccccccccccCCCCEEEEEECCCCc
Confidence 9999998765
No 166
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.61 E-value=1.4e-07 Score=71.94 Aligned_cols=70 Identities=11% Similarity=0.048 Sum_probs=53.7
Q ss_pred CeeEEEECCCCCeEEEEe-----CCCeEEEEEcCCCcee-c-cCCC--cEEEEEecCCcceeeeeeecccEEEEecCCCc
Q 036317 14 DANEVKLSNDGRLMLLTT-----LEGHIHVLHSFQGTLP-V-SHNS--TLEASFSQHLSLVALSVLILRSWVLEGSGDGS 84 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~~~-----~~~~i~l~d~~~~~~~-~-~~~~--~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~ 84 (106)
.+..++|||||++++.+. .+.+|++||+.+++.. . .... ...++|+||| +.|+.++.|..
T Consensus 122 ~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg-----------~~l~~~~~d~~ 190 (695)
T 2bkl_A 122 SLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDS-----------KGFYYEWLPTD 190 (695)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTS-----------SEEEEEECCCC
T ss_pred EEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccccceEEecCC-----------CEEEEEEecCC
Confidence 588999999999998443 3468999999998763 1 1111 1468999999 88888877665
Q ss_pred -------------EEEEECCCCC
Q 036317 85 -------------VYAWSARSGK 94 (106)
Q Consensus 85 -------------i~~wd~~~~~ 94 (106)
|++|++.+++
T Consensus 191 ~~~~~~~~~~~~~v~~~~l~t~~ 213 (695)
T 2bkl_A 191 PSIKVDERPGYTTIRYHTLGTEP 213 (695)
T ss_dssp TTSCGGGGGGGCEEEEEETTSCG
T ss_pred CCCccccCCCCCEEEEEECCCCc
Confidence 9999998765
No 167
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.59 E-value=3.9e-07 Score=62.47 Aligned_cols=79 Identities=10% Similarity=0.134 Sum_probs=56.7
Q ss_pred eeEEEECCCCCeEEEEeCCC---eEEEEEcCCCce---eccCCCcEEEEEecCCcceeeeeeecccEEEEe-cCCCc-EE
Q 036317 15 ANEVKLSNDGRLMLLTTLEG---HIHVLHSFQGTL---PVSHNSTLEASFSQHLSLVALSVLILRSWVLEG-SGDGS-VY 86 (106)
Q Consensus 15 v~~v~~spdg~~l~~~~~~~---~i~l~d~~~~~~---~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~-s~d~~-i~ 86 (106)
...++|+|||++++++..++ .+.+||..+++. ......+..++|+||| ++++.+ ..++. +.
T Consensus 86 ~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg-----------~~l~~~~~~~~~~i~ 154 (331)
T 3u4y_A 86 MADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNG-----------NGLILIDRSSANTVR 154 (331)
T ss_dssp CCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTS-----------SCEEEEEETTTTEEE
T ss_pred ccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCC-----------CEEEEEecCCCceEE
Confidence 33499999999998544442 899999998877 2233345789999999 755444 55577 99
Q ss_pred EEECCCCC--------------CCcEEEeCCC
Q 036317 87 AWSARSGK--------------EPPVIKWAPG 104 (106)
Q Consensus 87 ~wd~~~~~--------------~v~~i~~sp~ 104 (106)
+|++.... .+..++|+|+
T Consensus 155 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spd 186 (331)
T 3u4y_A 155 RFKIDADGVLFDTGQEFISGGTRPFNITFTPD 186 (331)
T ss_dssp EEEECTTCCEEEEEEEEECSSSSEEEEEECTT
T ss_pred EEEECCCCcEeecCCccccCCCCccceEECCC
Confidence 99976422 4567788775
No 168
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.59 E-value=2.6e-07 Score=63.90 Aligned_cols=79 Identities=13% Similarity=0.093 Sum_probs=56.1
Q ss_pred CeeEEEECCCCCeEEEEeCC---C--eEEEEEcCCCce---eccCCCcEEEEEecCCcceeeeeeecccEEEEecC----
Q 036317 14 DANEVKLSNDGRLMLLTTLE---G--HIHVLHSFQGTL---PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSG---- 81 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~~~~~---~--~i~l~d~~~~~~---~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~---- 81 (106)
.+..++|||||++++....+ + .+.++|+.+++. ..... +..+.|+||| +.|+.++.
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg-----------~~l~~~~~~~~~ 127 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN-IRSLEWNEDS-----------RKLLIVGFKRRE 127 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE-EEEEEECTTS-----------SEEEEEEECCCC
T ss_pred cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC-ccceeECCCC-----------CEEEEEEccCCC
Confidence 46789999999999877653 2 478889888776 22223 6779999999 65555542
Q ss_pred -----------------------CCcEEEEECCCCCC--------CcEEEeCCC
Q 036317 82 -----------------------DGSVYAWSARSGKE--------PPVIKWAPG 104 (106)
Q Consensus 82 -----------------------d~~i~~wd~~~~~~--------v~~i~~sp~ 104 (106)
...|++||+.+++. +..+.|+|+
T Consensus 128 ~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~spd 181 (347)
T 2gop_A 128 DEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKPRFSSGIWHRD 181 (347)
T ss_dssp ---------CCCC---------CEEEEEEEETTTTEEEEEEEEETTCEEEEETT
T ss_pred cCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecCCCcccccCCCC
Confidence 25799999988763 445566664
No 169
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.58 E-value=1.1e-06 Score=61.91 Aligned_cols=68 Identities=3% Similarity=0.072 Sum_probs=52.5
Q ss_pred CCeeEEEECCCCCeEEEEe-CCCeEEEEEcC-CCcee----c----cCCCcEEEEEecCCcceeeeeeecccEEEEecC-
Q 036317 13 SDANEVKLSNDGRLMLLTT-LEGHIHVLHSF-QGTLP----V----SHNSTLEASFSQHLSLVALSVLILRSWVLEGSG- 81 (106)
Q Consensus 13 ~~v~~v~~spdg~~l~~~~-~~~~i~l~d~~-~~~~~----~----~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~- 81 (106)
..+..++|+|||++++++. .++.|.+||.. +++.. . +...+..++|+||| ++++.+++
T Consensus 145 ~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg-----------~~l~v~~~~ 213 (365)
T 1jof_A 145 TGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTG-----------NYLYALMEA 213 (365)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTS-----------SEEEEEETT
T ss_pred CcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCC-----------CEEEEEECC
Confidence 4688999999999887765 46899999998 77651 1 13346779999999 88877665
Q ss_pred CCcEEEEECC
Q 036317 82 DGSVYAWSAR 91 (106)
Q Consensus 82 d~~i~~wd~~ 91 (106)
+++|.+|++.
T Consensus 214 ~~~v~v~~~~ 223 (365)
T 1jof_A 214 GNRICEYVID 223 (365)
T ss_dssp TTEEEEEEEC
T ss_pred CCeEEEEEEe
Confidence 6789998765
No 170
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.52 E-value=6.8e-07 Score=67.05 Aligned_cols=72 Identities=14% Similarity=0.175 Sum_probs=54.8
Q ss_pred CCCeeEEEECCCCCeEEEEeCC--------CeEEEEEcC-CC---ce---ec-cCCCcEEEEEecCCcceeeeeeecccE
Q 036317 12 VSDANEVKLSNDGRLMLLTTLE--------GHIHVLHSF-QG---TL---PV-SHNSTLEASFSQHLSLVALSVLILRSW 75 (106)
Q Consensus 12 ~~~v~~v~~spdg~~l~~~~~~--------~~i~l~d~~-~~---~~---~~-~~~~~~~~~fs~d~~~~~~~~~~~~~~ 75 (106)
...+..++|||||++|+.++.+ .+|++||+. ++ +. .. +...+..+.|+||| +.
T Consensus 187 ~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg-----------~l 255 (662)
T 3azo_A 187 HRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDG-----------SL 255 (662)
T ss_dssp SSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTS-----------CE
T ss_pred CCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCC-----------eE
Confidence 3467788999999999887754 489999998 57 33 22 24566789999999 88
Q ss_pred EEEecCCC--cEEEEECCCCC
Q 036317 76 VLEGSGDG--SVYAWSARSGK 94 (106)
Q Consensus 76 i~t~s~d~--~i~~wd~~~~~ 94 (106)
+++++.++ .|++||+++++
T Consensus 256 ~~~~~~~~~~~l~~~~~~~~~ 276 (662)
T 3azo_A 256 IVATDRTGWWNLHRVDPATGA 276 (662)
T ss_dssp EEEECTTSSCEEEEECTTTCC
T ss_pred EEEECCCCCeEEEEEECCCCc
Confidence 88888888 67777776665
No 171
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.50 E-value=2.9e-07 Score=64.90 Aligned_cols=79 Identities=8% Similarity=0.069 Sum_probs=59.2
Q ss_pred CeeEEEECCCCCeEEEEeCCCeEEEEEcC-CCcee---c--cCCCcEEEEEecCCcceeeeeeeccc--EEEEec-----
Q 036317 14 DANEVKLSNDGRLMLLTTLEGHIHVLHSF-QGTLP---V--SHNSTLEASFSQHLSLVALSVLILRS--WVLEGS----- 80 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~~~~~~~i~l~d~~-~~~~~---~--~~~~~~~~~fs~d~~~~~~~~~~~~~--~i~t~s----- 80 (106)
.+..++|+|||+++++++.+ .+.+||+. +++.. . ..+.+..++|+||| + ++++++
T Consensus 41 ~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg-----------~~l~~~~~~~~~~~ 108 (365)
T 1jof_A 41 PISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNT-----------RAIFLLAAKQPPYA 108 (365)
T ss_dssp CCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCC-----------EEEEEEECSSTTCC
T ss_pred CCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCC-----------CEEEEEEecCCcce
Confidence 67899999999999888877 99999987 77651 1 11334558899999 7 355554
Q ss_pred --------CCCcEEEEECC-CCC--------------CCcEEEeCCC
Q 036317 81 --------GDGSVYAWSAR-SGK--------------EPPVIKWAPG 104 (106)
Q Consensus 81 --------~d~~i~~wd~~-~~~--------------~v~~i~~sp~ 104 (106)
.++++.+|++. +|+ .+.+++|+|+
T Consensus 109 ~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spd 155 (365)
T 1jof_A 109 VYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPT 155 (365)
T ss_dssp EEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTT
T ss_pred eccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCC
Confidence 68899999997 453 3567788885
No 172
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.42 E-value=6.8e-06 Score=56.55 Aligned_cols=84 Identities=13% Similarity=0.200 Sum_probs=63.9
Q ss_pred CCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCcee----ccCCCcEEEEEecCCcceeeeeeecccEEEEecCC---
Q 036317 10 GDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTLP----VSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGD--- 82 (106)
Q Consensus 10 ~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~~----~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d--- 82 (106)
.+...+..++|+|+|+.+++...++.|.+||..+++.. .....+..+.++|+| +.+++...+
T Consensus 42 ~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg-----------~l~v~~~~~~~~ 110 (333)
T 2dg1_A 42 KKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDG-----------RLFVCYLGDFKS 110 (333)
T ss_dssp SSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTS-----------CEEEEECTTSSS
T ss_pred ccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCC-----------cEEEEeCCCCCC
Confidence 33456789999999997777788899999999888761 233557789999999 877777666
Q ss_pred -CcEEEEECCCCC------------CCcEEEeCCC
Q 036317 83 -GSVYAWSARSGK------------EPPVIKWAPG 104 (106)
Q Consensus 83 -~~i~~wd~~~~~------------~v~~i~~sp~ 104 (106)
+.|++||.++++ .+..+.++|+
T Consensus 111 ~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~ 145 (333)
T 2dg1_A 111 TGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSK 145 (333)
T ss_dssp CCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTT
T ss_pred CceEEEEeCCCCEEEEEEccCccCCcccceEECCC
Confidence 689999987664 3456666664
No 173
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.39 E-value=7.8e-07 Score=62.06 Aligned_cols=69 Identities=7% Similarity=-0.037 Sum_probs=53.7
Q ss_pred eeEEEECCCCCeEEEEeCC---CeEEEEEcCCCce---eccCCCcE-EEEEecCCcceeeeeeecccEEEEecCCCcEEE
Q 036317 15 ANEVKLSNDGRLMLLTTLE---GHIHVLHSFQGTL---PVSHNSTL-EASFSQHLSLVALSVLILRSWVLEGSGDGSVYA 87 (106)
Q Consensus 15 v~~v~~spdg~~l~~~~~~---~~i~l~d~~~~~~---~~~~~~~~-~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~~ 87 (106)
+..++|||||++++.+... ..+.+||..+++. ........ .+.|+||| ++|+..+.++.+++
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg-----------~~l~~~~~~~~l~~ 106 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDE-----------RAFFYVKNELNLMK 106 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTS-----------SEEEEEETTTEEEE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCC-----------CEEEEEEcCCcEEE
Confidence 6788999999998877543 4788899988876 11222222 27899999 99999888889999
Q ss_pred EECCCCC
Q 036317 88 WSARSGK 94 (106)
Q Consensus 88 wd~~~~~ 94 (106)
||+.+++
T Consensus 107 ~d~~~~~ 113 (396)
T 3c5m_A 107 VDLETLE 113 (396)
T ss_dssp EETTTCC
T ss_pred EECCCCC
Confidence 9999887
No 174
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.39 E-value=2.9e-06 Score=61.71 Aligned_cols=74 Identities=8% Similarity=-0.031 Sum_probs=56.5
Q ss_pred eeEEEECCCCCeEEEEeCCCeEEEEEcCCCce----eccCCCcEEEEEecCCcceeeeeeecccEEEEecCCCcEEEEEC
Q 036317 15 ANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSVYAWSA 90 (106)
Q Consensus 15 v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~~wd~ 90 (106)
|+.++| |+++|+++ .++.+++||..+... +.+...+..+.+. . ..++.+..||++++||+
T Consensus 90 V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~--~-----------p~~av~~~dG~L~v~dl 153 (388)
T 1xip_A 90 VIFVCF--HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNV--N-----------NTLVILNSVNDLSALDL 153 (388)
T ss_dssp EEEEEE--ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEEC--S-----------SEEEEEETTSEEEEEET
T ss_pred eeEEEE--CCCEEEEE-cCCcEEEEEchhhhccCccceeecceeeEEec--C-----------CCEEEEECCCCEEEEEc
Confidence 999999 99988888 889999999866543 2233333333332 2 33777889999999999
Q ss_pred CCCC------CCcEEEeCCC
Q 036317 91 RSGK------EPPVIKWAPG 104 (106)
Q Consensus 91 ~~~~------~v~~i~~sp~ 104 (106)
++++ .|+|++|||+
T Consensus 154 ~~~~~~~~~~~Vs~v~WSpk 173 (388)
T 1xip_A 154 RTKSTKQLAQNVTSFDVTNS 173 (388)
T ss_dssp TTCCEEEEEESEEEEEECSS
T ss_pred cCCccccccCCceEEEEcCC
Confidence 9886 9999999996
No 175
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.37 E-value=2.6e-06 Score=59.37 Aligned_cols=69 Identities=12% Similarity=0.023 Sum_probs=49.9
Q ss_pred CeeEEEECCCCCeEEEEeCC-----CeEEEEEcCCCcee--ccCCCcEEEEEec-CCcceeeeeeecccEEEEec-----
Q 036317 14 DANEVKLSNDGRLMLLTTLE-----GHIHVLHSFQGTLP--VSHNSTLEASFSQ-HLSLVALSVLILRSWVLEGS----- 80 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~~~~~-----~~i~l~d~~~~~~~--~~~~~~~~~~fs~-d~~~~~~~~~~~~~~i~t~s----- 80 (106)
.+..++|+|||++++.++.+ +.+++||..+++.. ...... ...|+| || +.++.++
T Consensus 239 ~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~-~~~~s~~dg-----------~~l~~~~~~~p~ 306 (396)
T 3c5m_A 239 SCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPPC-SHLMSNFDG-----------SLMVGDGCDAPV 306 (396)
T ss_dssp EEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCSE-EEEEECSSS-----------SEEEEEECCC--
T ss_pred cccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCCC-CCCccCCCC-----------ceEEEecCCcce
Confidence 47788999999988877544 44999999888761 111122 288999 99 6666543
Q ss_pred -----------CCCcEEEEECCCCC
Q 036317 81 -----------GDGSVYAWSARSGK 94 (106)
Q Consensus 81 -----------~d~~i~~wd~~~~~ 94 (106)
.+..|++||+++++
T Consensus 307 ~~~~~~~~~~~~~~~i~~~d~~~~~ 331 (396)
T 3c5m_A 307 DVADADSYNIENDPFLYVLNTKAKS 331 (396)
T ss_dssp --------CCCCCCEEEEEETTTTB
T ss_pred eeccccccccCCCCcEEEEecccCc
Confidence 34789999998876
No 176
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.36 E-value=2.9e-06 Score=59.31 Aligned_cols=90 Identities=8% Similarity=-0.078 Sum_probs=58.3
Q ss_pred CeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce----eccCCCcEE--EEEecCCcceeeeeeecccE-----------E
Q 036317 14 DANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL----PVSHNSTLE--ASFSQHLSLVALSVLILRSW-----------V 76 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~----~~~~~~~~~--~~fs~d~~~~~~~~~~~~~~-----------i 76 (106)
.+..+.|||||++|+.+..++.+++||+.+++. ......... ..++||+++++........+ .
T Consensus 82 ~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~ 161 (388)
T 3pe7_A 82 NTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEF 161 (388)
T ss_dssp CSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHH
T ss_pred CccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhh
Confidence 344678999999999999999999999999876 222222222 34589994333211000000 0
Q ss_pred EEecCCCcEEEEECCCCC---------CCcEEEeCC
Q 036317 77 LEGSGDGSVYAWSARSGK---------EPPVIKWAP 103 (106)
Q Consensus 77 ~t~s~d~~i~~wd~~~~~---------~v~~i~~sp 103 (106)
.....+..|++||+++++ .+..++|+|
T Consensus 162 ~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp 197 (388)
T 3pe7_A 162 YFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRP 197 (388)
T ss_dssp GGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEET
T ss_pred hccCCcceEEEEECCCCceEEeecCCccccccEECC
Confidence 013345789999999987 467788888
No 177
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.34 E-value=6.5e-06 Score=56.02 Aligned_cols=71 Identities=4% Similarity=-0.060 Sum_probs=58.0
Q ss_pred CCCeeEEEECCCCC-eEEEEeCCCeEEEEEcCCCce---eccCCCcEEEEEecCCcceeeeeeecccEEEEecCCCcEEE
Q 036317 12 VSDANEVKLSNDGR-LMLLTTLEGHIHVLHSFQGTL---PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSVYA 87 (106)
Q Consensus 12 ~~~v~~v~~spdg~-~l~~~~~~~~i~l~d~~~~~~---~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~~ 87 (106)
......++|+|+|+ .+++...++.|+.||..++ . ......+..+.++|+| +.+++...++.|.+
T Consensus 27 ~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~~dg-----------~l~v~~~~~~~i~~ 94 (296)
T 3e5z_A 27 FTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LSPEMHPSHHQNGHCLNKQG-----------HLIACSHGLRRLER 94 (296)
T ss_dssp CSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EEEEESSCSSEEEEEECTTC-----------CEEEEETTTTEEEE
T ss_pred CccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eEEEECCCCCcceeeECCCC-----------cEEEEecCCCeEEE
Confidence 34678999999999 6677788899999999887 5 2234456789999999 88888877889999
Q ss_pred EECCCCC
Q 036317 88 WSARSGK 94 (106)
Q Consensus 88 wd~~~~~ 94 (106)
||.++|+
T Consensus 95 ~d~~~g~ 101 (296)
T 3e5z_A 95 QREPGGE 101 (296)
T ss_dssp ECSTTCC
T ss_pred EcCCCCc
Confidence 9998876
No 178
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.27 E-value=1.5e-05 Score=55.48 Aligned_cols=71 Identities=11% Similarity=0.102 Sum_probs=57.6
Q ss_pred CCCeeEEEECCCCCeEEEEeCC------------------------CeEEEEEcCCCcee-----ccCCCcEEEEEecCC
Q 036317 12 VSDANEVKLSNDGRLMLLTTLE------------------------GHIHVLHSFQGTLP-----VSHNSTLEASFSQHL 62 (106)
Q Consensus 12 ~~~v~~v~~spdg~~l~~~~~~------------------------~~i~l~d~~~~~~~-----~~~~~~~~~~fs~d~ 62 (106)
-+.+..++++|+|+.+++...+ +.+.+||..++++. .....+..++++|+|
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 3589999999999988777766 37999999888871 223456789999999
Q ss_pred cceeeeeeecccEEEEecCCCcEEEEECCCC
Q 036317 63 SLVALSVLILRSWVLEGSGDGSVYAWSARSG 93 (106)
Q Consensus 63 ~~~~~~~~~~~~~i~t~s~d~~i~~wd~~~~ 93 (106)
+.+++...++.|++||....
T Consensus 103 -----------~l~v~d~~~~~v~~~~~~g~ 122 (329)
T 3fvz_A 103 -----------NYWVTDVALHQVFKLDPHSK 122 (329)
T ss_dssp -----------CEEEEETTTTEEEEECTTCS
T ss_pred -----------CEEEEECCCCEEEEEeCCCC
Confidence 98888888999999998644
No 179
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.27 E-value=2.1e-05 Score=53.02 Aligned_cols=69 Identities=16% Similarity=0.256 Sum_probs=52.6
Q ss_pred CCeeEEEECCCCCeEEEEeCCC-eEEEEEcCCCce----ec--cCCCcEEEEEecCCcceeeeeeecccEEEEecCCCcE
Q 036317 13 SDANEVKLSNDGRLMLLTTLEG-HIHVLHSFQGTL----PV--SHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSV 85 (106)
Q Consensus 13 ~~v~~v~~spdg~~l~~~~~~~-~i~l~d~~~~~~----~~--~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i 85 (106)
..+..++++|+|+.+++...++ .|.+||.. ++. .. ....+..++++|+| +.+++ +.|+.|
T Consensus 207 ~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~~i~~~~~g-----------~l~vs-~~~~~v 273 (286)
T 1q7f_A 207 NYPIGVGINSNGEILIADNHNNFNLTIFTQD-GQLISALESKVKHAQCFDVALMDDG-----------SVVLA-SKDYRL 273 (286)
T ss_dssp CSEEEEEECTTCCEEEEECSSSCEEEEECTT-SCEEEEEEESSCCSCEEEEEEETTT-----------EEEEE-ETTTEE
T ss_pred CCCcEEEECCCCCEEEEeCCCCEEEEEECCC-CCEEEEEcccCCCCcceeEEECCCC-----------cEEEE-CCCCeE
Confidence 5788999999999777777775 99999964 443 11 12235679999999 87777 568999
Q ss_pred EEEECCCCC
Q 036317 86 YAWSARSGK 94 (106)
Q Consensus 86 ~~wd~~~~~ 94 (106)
++|++....
T Consensus 274 ~v~~~~~~~ 282 (286)
T 1q7f_A 274 YIYRYVQLA 282 (286)
T ss_dssp EEEECSCCC
T ss_pred EEEEccccc
Confidence 999987644
No 180
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.22 E-value=2.8e-06 Score=60.26 Aligned_cols=69 Identities=16% Similarity=0.114 Sum_probs=54.4
Q ss_pred EEEECCCCCeEEEEeC----------CCeEEEEEcCCCce----ecc------CCCcEEEEEecCCcceeeeeeecccEE
Q 036317 17 EVKLSNDGRLMLLTTL----------EGHIHVLHSFQGTL----PVS------HNSTLEASFSQHLSLVALSVLILRSWV 76 (106)
Q Consensus 17 ~v~~spdg~~l~~~~~----------~~~i~l~d~~~~~~----~~~------~~~~~~~~fs~d~~~~~~~~~~~~~~i 76 (106)
.++|||||++++++.. ++.|.+||..+++. +.. ...+..+.|+||| +++
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg-----------~~l 122 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDG-----------KFI 122 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTS-----------SEE
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCC-----------CEE
Confidence 8999999999988863 56799999988776 111 1345668999999 998
Q ss_pred EEecC--CCcEEEEECCCCCCC
Q 036317 77 LEGSG--DGSVYAWSARSGKEP 96 (106)
Q Consensus 77 ~t~s~--d~~i~~wd~~~~~~v 96 (106)
+.++. +++|.+||+++++.+
T Consensus 123 ~v~n~~~~~~v~v~d~~~~~~~ 144 (361)
T 2oiz_A 123 VLQNASPATSIGIVDVAKGDYV 144 (361)
T ss_dssp EEEEESSSEEEEEEETTTTEEE
T ss_pred EEECCCCCCeEEEEECCCCcEE
Confidence 88864 579999999988733
No 181
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.21 E-value=3e-05 Score=52.28 Aligned_cols=81 Identities=7% Similarity=0.078 Sum_probs=60.1
Q ss_pred CCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce--e---ccCCCcEEEEEecCCcceeeeeeecccEEEEecCCC-cE
Q 036317 12 VSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL--P---VSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDG-SV 85 (106)
Q Consensus 12 ~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~--~---~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~-~i 85 (106)
...+..++++|+|+.+++...++.|++||...... . .....+..++++++| +.+++...++ .|
T Consensus 163 ~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G-----------~l~v~~~~~~~~i 231 (286)
T 1q7f_A 163 LEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNG-----------EILIADNHNNFNL 231 (286)
T ss_dssp CSSEEEEEECSSSEEEEEEGGGTEEEEEETTCCEEEEESCTTTSCSEEEEEECTTC-----------CEEEEECSSSCEE
T ss_pred cCCcEEEEECCCCCEEEEECCCCEEEEEcCCCCEEEEEccCCccCCCcEEEECCCC-----------CEEEEeCCCCEEE
Confidence 34688999999999777777889999999744333 1 112456789999999 8888888776 99
Q ss_pred EEEECCCCC------------CCcEEEeCCC
Q 036317 86 YAWSARSGK------------EPPVIKWAPG 104 (106)
Q Consensus 86 ~~wd~~~~~------------~v~~i~~sp~ 104 (106)
++||.. ++ .+..++++|+
T Consensus 232 ~~~~~~-g~~~~~~~~~~~~~~~~~i~~~~~ 261 (286)
T 1q7f_A 232 TIFTQD-GQLISALESKVKHAQCFDVALMDD 261 (286)
T ss_dssp EEECTT-SCEEEEEEESSCCSCEEEEEEETT
T ss_pred EEECCC-CCEEEEEcccCCCCcceeEEECCC
Confidence 999964 44 2446777664
No 182
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.13 E-value=1.9e-05 Score=59.73 Aligned_cols=75 Identities=11% Similarity=0.161 Sum_probs=58.3
Q ss_pred CeeEEEECCCCCeEEEEeCCCeEEEEEcC--CCce--ecc-CCCcEEEEEe----cCCcceeeeeeecccEEEEecCC-C
Q 036317 14 DANEVKLSNDGRLMLLTTLEGHIHVLHSF--QGTL--PVS-HNSTLEASFS----QHLSLVALSVLILRSWVLEGSGD-G 83 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~~~~~~~i~l~d~~--~~~~--~~~-~~~~~~~~fs----~d~~~~~~~~~~~~~~i~t~s~d-~ 83 (106)
.+..+.|||||+++++++.++.+.+||.. +++. ... ......+.|+ ||| ++++.+++. +
T Consensus 198 ~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P~~ia~s~~~~pDG-----------k~l~v~n~~~~ 266 (567)
T 1qks_A 198 AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWED-----------KYAIAGAYWPP 266 (567)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTT-----------TEEEEEEEETT
T ss_pred CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCCceeEEccccCCCC-----------CEEEEEEccCC
Confidence 56789999999999999999999999996 6665 111 1234678999 699 888777664 7
Q ss_pred cEEEEECCCCCCCcEE
Q 036317 84 SVYAWSARSGKEPPVI 99 (106)
Q Consensus 84 ~i~~wd~~~~~~v~~i 99 (106)
++.++|..+.+.+..+
T Consensus 267 ~v~ViD~~t~~~~~~i 282 (567)
T 1qks_A 267 QYVIMDGETLEPKKIQ 282 (567)
T ss_dssp EEEEEETTTCCEEEEE
T ss_pred eEEEEECCCCcEEEEE
Confidence 9999999888744433
No 183
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.13 E-value=6.9e-05 Score=50.13 Aligned_cols=78 Identities=6% Similarity=0.100 Sum_probs=59.9
Q ss_pred CceeeecCCCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCcee-----ccCCCcEEEEEecCCcceeeeeeecccEE
Q 036317 2 PFDIFSDGGDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTLP-----VSHNSTLEASFSQHLSLVALSVLILRSWV 76 (106)
Q Consensus 2 ~~~~~~~~~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~~-----~~~~~~~~~~fs~d~~~~~~~~~~~~~~i 76 (106)
.+..+.+......+.+++++++|+.+++...++.+.+||.. ++.. .....+..+.++++| +..
T Consensus 4 ~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g-----------~l~ 71 (299)
T 2z2n_A 4 KLQELNLTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDG-----------EVW 71 (299)
T ss_dssp EEEEEECCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTS-----------CEE
T ss_pred eEEEEcCCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCC-----------CEE
Confidence 45677777666799999999999977766668899999987 6651 123456778999999 777
Q ss_pred EEecCCCcEEEEECC
Q 036317 77 LEGSGDGSVYAWSAR 91 (106)
Q Consensus 77 ~t~s~d~~i~~wd~~ 91 (106)
++...++.|..||.+
T Consensus 72 v~~~~~~~i~~~~~~ 86 (299)
T 2z2n_A 72 FTENAANKIGRITKK 86 (299)
T ss_dssp EEETTTTEEEEECTT
T ss_pred EeCCCCCeEEEECCC
Confidence 777667788888865
No 184
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.08 E-value=8.8e-05 Score=51.50 Aligned_cols=69 Identities=9% Similarity=0.164 Sum_probs=54.1
Q ss_pred CeeEEEECC-CCCeEEEEe-CCCeEEEEEcCCCce---ec-----------cCCCcEEEEEecC-CcceeeeeeecccEE
Q 036317 14 DANEVKLSN-DGRLMLLTT-LEGHIHVLHSFQGTL---PV-----------SHNSTLEASFSQH-LSLVALSVLILRSWV 76 (106)
Q Consensus 14 ~v~~v~~sp-dg~~l~~~~-~~~~i~l~d~~~~~~---~~-----------~~~~~~~~~fs~d-~~~~~~~~~~~~~~i 76 (106)
....++++| +|+.+++.+ .++.|.+|| .+++. .. ....+..++++|+ + +.+
T Consensus 144 ~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g-----------~l~ 211 (329)
T 3fvz_A 144 QPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLD-----------QLC 211 (329)
T ss_dssp SEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTT-----------EEE
T ss_pred CCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCC-----------EEE
Confidence 688999999 788777776 689999999 45654 11 1123677999999 7 778
Q ss_pred EEecCCCcEEEEECCCCC
Q 036317 77 LEGSGDGSVYAWSARSGK 94 (106)
Q Consensus 77 ~t~s~d~~i~~wd~~~~~ 94 (106)
++...++.|++||.++|+
T Consensus 212 v~d~~~~~I~~~~~~~G~ 229 (329)
T 3fvz_A 212 VADRENGRIQCFKTDTKE 229 (329)
T ss_dssp EEETTTTEEEEEETTTCC
T ss_pred EEECCCCEEEEEECCCCc
Confidence 888889999999999776
No 185
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=97.97 E-value=0.00017 Score=49.50 Aligned_cols=82 Identities=17% Similarity=0.175 Sum_probs=58.4
Q ss_pred CCCeeEEEECCCCCeEEEEeCC----CeEEEEEcCCCcee------ccCCCcEEEEEecCCcceeeeeeecccEEEEecC
Q 036317 12 VSDANEVKLSNDGRLMLLTTLE----GHIHVLHSFQGTLP------VSHNSTLEASFSQHLSLVALSVLILRSWVLEGSG 81 (106)
Q Consensus 12 ~~~v~~v~~spdg~~l~~~~~~----~~i~l~d~~~~~~~------~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~ 81 (106)
...+..++++|+|+.+++...+ +.+.+||..+++.. .....+..+.++|+| +..++...
T Consensus 86 ~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g-----------~l~v~~~~ 154 (333)
T 2dg1_A 86 KANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKG-----------GFYFTDFR 154 (333)
T ss_dssp SSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTS-----------CEEEEECC
T ss_pred CCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCC-----------CEEEEecc
Confidence 3478999999999977766665 68999998877652 122346678999999 77776653
Q ss_pred ------CCcEEEEECCCCC---------CCcEEEeCCC
Q 036317 82 ------DGSVYAWSARSGK---------EPPVIKWAPG 104 (106)
Q Consensus 82 ------d~~i~~wd~~~~~---------~v~~i~~sp~ 104 (106)
.+.|+.+|.++++ .+..+.|+|+
T Consensus 155 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~d 192 (333)
T 2dg1_A 155 GYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTD 192 (333)
T ss_dssp CBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTT
T ss_pred ccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCC
Confidence 3456666666554 4567788775
No 186
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.96 E-value=3.3e-05 Score=58.92 Aligned_cols=68 Identities=10% Similarity=0.020 Sum_probs=51.8
Q ss_pred CeeEEEECCCCCeEEEEeCCCe----------------EEEEEcCCCce------ec--cCCCcEEEEEecCCcceeeee
Q 036317 14 DANEVKLSNDGRLMLLTTLEGH----------------IHVLHSFQGTL------PV--SHNSTLEASFSQHLSLVALSV 69 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~~~~~~~----------------i~l~d~~~~~~------~~--~~~~~~~~~fs~d~~~~~~~~ 69 (106)
.+..++|+|||+.++.+..++. |++|++.+++. .. +......+.|||||
T Consensus 172 ~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg------- 244 (710)
T 2xdw_A 172 KFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDG------- 244 (710)
T ss_dssp CSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTS-------
T ss_pred ccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCC-------
Confidence 3567999999999999887765 99999988762 11 22345679999999
Q ss_pred eecccEEEEecC-----CCcEEEEECCC
Q 036317 70 LILRSWVLEGSG-----DGSVYAWSARS 92 (106)
Q Consensus 70 ~~~~~~i~t~s~-----d~~i~~wd~~~ 92 (106)
++|+..+. +..|++||+.+
T Consensus 245 ----~~l~~~~~~~~~~~~~l~~~d~~~ 268 (710)
T 2xdw_A 245 ----RYVLLSIREGCDPVNRLWYCDLQQ 268 (710)
T ss_dssp ----CEEEEEEECSSSSCCEEEEEEGGG
T ss_pred ----CEEEEEEEccCCCccEEEEEECcc
Confidence 77665543 56899999986
No 187
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.93 E-value=0.00043 Score=46.21 Aligned_cols=76 Identities=9% Similarity=0.121 Sum_probs=55.4
Q ss_pred eecCCCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce-----eccCCCcEEEEEecCCcceeeeeeecccEEEEec
Q 036317 6 FSDGGDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL-----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGS 80 (106)
Q Consensus 6 ~~~~~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~-----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s 80 (106)
+.+......+..++++|+|+.+++...++.+..+|. +++. +.....+..+.++++| +..++..
T Consensus 92 ~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g-----------~l~v~~~ 159 (299)
T 2z2n_A 92 YTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDN-----------ALWFTEN 159 (299)
T ss_dssp EECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTS-----------CEEEEET
T ss_pred EeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCC-----------CEEEEeC
Confidence 333333457899999999997777777889999998 6665 1123346678999999 7777776
Q ss_pred CCCcEEEEECCCCC
Q 036317 81 GDGSVYAWSARSGK 94 (106)
Q Consensus 81 ~d~~i~~wd~~~~~ 94 (106)
.++.|..||. +++
T Consensus 160 ~~~~i~~~~~-~g~ 172 (299)
T 2z2n_A 160 QNNAIGRITE-SGD 172 (299)
T ss_dssp TTTEEEEECT-TCC
T ss_pred CCCEEEEEcC-CCc
Confidence 6778888887 554
No 188
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=97.92 E-value=0.0001 Score=49.96 Aligned_cols=81 Identities=16% Similarity=0.183 Sum_probs=56.7
Q ss_pred CCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCcee----c----cCCCcEEEEEecCCcceeeeeeecccEEEE----e
Q 036317 12 VSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTLP----V----SHNSTLEASFSQHLSLVALSVLILRSWVLE----G 79 (106)
Q Consensus 12 ~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~~----~----~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t----~ 79 (106)
...+..++++|+|+.+++...++.+.+||..+++.. . ....+..+.++|+| +..++ |
T Consensus 68 ~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G-----------~l~vtd~~~g 136 (296)
T 3e5z_A 68 SHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDG-----------SLWFSDPTYG 136 (296)
T ss_dssp CSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTS-----------CEEEEECSHH
T ss_pred CCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCC-----------CEEEECCccc
Confidence 456889999999997777666789999999888761 1 11234568999999 77776 3
Q ss_pred c-------------CCCcEEEEECCCCC---------CCcEEEeCCC
Q 036317 80 S-------------GDGSVYAWSARSGK---------EPPVIKWAPG 104 (106)
Q Consensus 80 s-------------~d~~i~~wd~~~~~---------~v~~i~~sp~ 104 (106)
. ..+.|+.++.. ++ .+..++|+|+
T Consensus 137 ~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~gi~~s~d 182 (296)
T 3e5z_A 137 IDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKPNGLAFLPS 182 (296)
T ss_dssp HHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSEEEEEECTT
T ss_pred cccccccccccccCCCcEEEEECCC-CCEEEeecCCCCCccEEECCC
Confidence 2 12356666554 44 4577888876
No 189
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.91 E-value=4.1e-05 Score=52.69 Aligned_cols=77 Identities=8% Similarity=0.063 Sum_probs=56.2
Q ss_pred CeeEEEECCCCCeEEEEe---------CCCeEEEEEcCCCceeccCCCcEEEEEecCCcceeeeeeecccEEEEecCC--
Q 036317 14 DANEVKLSNDGRLMLLTT---------LEGHIHVLHSFQGTLPVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGD-- 82 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~~~---------~~~~i~l~d~~~~~~~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d-- 82 (106)
.+...++ ||++++... .+..+.+||..+++...- ..+..+.||||| ++|+..+.+
T Consensus 16 ~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l-~~~~~~~~SpDg-----------~~la~~~~~~~ 81 (347)
T 2gop_A 16 YLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI-ENATMPRISPDG-----------KKIAFMRANEE 81 (347)
T ss_dssp EEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE-ESCEEEEECTTS-----------SEEEEEEEETT
T ss_pred EcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc-ccCCCeEECCCC-----------CEEEEEEeccC
Confidence 6778888 999887653 256789999988876222 455679999999 777766543
Q ss_pred -C--cEEEEECCCCC--------CCcEEEeCCC
Q 036317 83 -G--SVYAWSARSGK--------EPPVIKWAPG 104 (106)
Q Consensus 83 -~--~i~~wd~~~~~--------~v~~i~~sp~ 104 (106)
+ .|++||+++++ .+..++|+|+
T Consensus 82 ~~~~~l~~~~~~~g~~~~l~~~~~~~~~~wspd 114 (347)
T 2gop_A 82 KKVSEIWVADLETLSSKKILEAKNIRSLEWNED 114 (347)
T ss_dssp TTEEEEEEEETTTTEEEEEEEESEEEEEEECTT
T ss_pred CCcceEEEEECCCCceEEEEcCCCccceeECCC
Confidence 2 48888888776 2567788886
No 190
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=97.91 E-value=7.9e-05 Score=51.02 Aligned_cols=78 Identities=12% Similarity=0.121 Sum_probs=58.3
Q ss_pred CeeEEEECCCCCeEEE-EeCCCeEEEEEc--CCCcee---------ccCCCcEEEEEecCCcceeeeeeecccEEEEecC
Q 036317 14 DANEVKLSNDGRLMLL-TTLEGHIHVLHS--FQGTLP---------VSHNSTLEASFSQHLSLVALSVLILRSWVLEGSG 81 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~-~~~~~~i~l~d~--~~~~~~---------~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~ 81 (106)
..+.++|+|||+.++. .+.++.|.+||. .++.+. ...+.+..++++++| +..++...
T Consensus 150 ~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G-----------~lwva~~~ 218 (297)
T 3g4e_A 150 ISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEG-----------KLWVACYN 218 (297)
T ss_dssp BEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTS-----------CEEEEEET
T ss_pred cccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCC-----------CEEEEEcC
Confidence 3568999999997754 456789999986 566541 112345678999999 87777777
Q ss_pred CCcEEEEECCCCC----------CCcEEEeC
Q 036317 82 DGSVYAWSARSGK----------EPPVIKWA 102 (106)
Q Consensus 82 d~~i~~wd~~~~~----------~v~~i~~s 102 (106)
++.|..||.++|+ .+.+++|+
T Consensus 219 ~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~ 249 (297)
T 3g4e_A 219 GGRVIRLDPVTGKRLQTVKLPVDKTTSCCFG 249 (297)
T ss_dssp TTEEEEECTTTCCEEEEEECSSSBEEEEEEE
T ss_pred CCEEEEEcCCCceEEEEEECCCCCceEEEEe
Confidence 7889999999887 45677776
No 191
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=97.91 E-value=0.0001 Score=52.79 Aligned_cols=73 Identities=14% Similarity=0.102 Sum_probs=55.6
Q ss_pred eeEEEECCCCCeEEEEeC----------CCeEEEEEcCCCce--ec-cCCCcEEEEEecCCcceeeeeeeccc-EEEEec
Q 036317 15 ANEVKLSNDGRLMLLTTL----------EGHIHVLHSFQGTL--PV-SHNSTLEASFSQHLSLVALSVLILRS-WVLEGS 80 (106)
Q Consensus 15 v~~v~~spdg~~l~~~~~----------~~~i~l~d~~~~~~--~~-~~~~~~~~~fs~d~~~~~~~~~~~~~-~i~t~s 80 (106)
...+.++|||+.+.++.. +++|.++|..++++ .- -...+..+.|+||| + .++++.
T Consensus 269 ~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~p~~i~~s~Dg-----------~~~l~v~~ 337 (373)
T 2mad_H 269 WQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQDG-----------GPDLYALS 337 (373)
T ss_pred eEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCCCcCeEEECCCC-----------CeEEEEEc
Confidence 334789999998887654 35899999999887 11 12246679999999 8 677776
Q ss_pred -CCCcEEEEECCCCCCCcE
Q 036317 81 -GDGSVYAWSARSGKEPPV 98 (106)
Q Consensus 81 -~d~~i~~wd~~~~~~v~~ 98 (106)
.+++|.++|+++++.+..
T Consensus 338 ~~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 338 AGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred CCCCeEEEEECCCCCEEee
Confidence 488999999999985544
No 192
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.89 E-value=3e-05 Score=56.37 Aligned_cols=72 Identities=8% Similarity=-0.007 Sum_probs=54.9
Q ss_pred EEEECCCCCeEEEEe----------CCCeEEEEEcCCCce----eccC-------CCcEEEEEecCCcceeeeeeecccE
Q 036317 17 EVKLSNDGRLMLLTT----------LEGHIHVLHSFQGTL----PVSH-------NSTLEASFSQHLSLVALSVLILRSW 75 (106)
Q Consensus 17 ~v~~spdg~~l~~~~----------~~~~i~l~d~~~~~~----~~~~-------~~~~~~~fs~d~~~~~~~~~~~~~~ 75 (106)
.+++||||++++++. .++.+.+||..+++. .... ..+..+.|+||| ++
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDG-----------k~ 150 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDG-----------KT 150 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTS-----------SE
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCC-----------CE
Confidence 499999999998775 357899999999887 1111 134568999999 88
Q ss_pred EEEecC--CCcEEEEECCCCCCCcEE
Q 036317 76 VLEGSG--DGSVYAWSARSGKEPPVI 99 (106)
Q Consensus 76 i~t~s~--d~~i~~wd~~~~~~v~~i 99 (106)
+..+.. +++|.++|+++++.+..|
T Consensus 151 lyVan~~~~~~VsVID~~t~~vv~tI 176 (386)
T 3sjl_D 151 LLFYQFSPAPAVGVVDLEGKAFKRML 176 (386)
T ss_dssp EEEEECSSSCEEEEEETTTTEEEEEE
T ss_pred EEEEEcCCCCeEEEEECCCCcEEEEE
Confidence 777754 679999999999844333
No 193
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.87 E-value=0.0004 Score=46.38 Aligned_cols=79 Identities=15% Similarity=0.156 Sum_probs=59.0
Q ss_pred ceeeecCCCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCcee-----ccCCCcEEEEEecCCcceeeeeeecccEEE
Q 036317 3 FDIFSDGGDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTLP-----VSHNSTLEASFSQHLSLVALSVLILRSWVL 77 (106)
Q Consensus 3 ~~~~~~~~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~~-----~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~ 77 (106)
+..+.+......+.++.++++|+.+++...++.+.++|.. ++.. .....+..+.+++++ +..+
T Consensus 10 ~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g-----------~l~v 77 (300)
T 2qc5_A 10 LEEFNLSIPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLG-----------DIWF 77 (300)
T ss_dssp EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTS-----------CEEE
T ss_pred EEEEecCCCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCC-----------CEEE
Confidence 4556666556689999999999977777678999999987 6651 122456778899999 7777
Q ss_pred EecCCCcEEEEECCCCC
Q 036317 78 EGSGDGSVYAWSARSGK 94 (106)
Q Consensus 78 t~s~d~~i~~wd~~~~~ 94 (106)
+...++.|..+|.. ++
T Consensus 78 ~~~~~~~v~~~d~~-g~ 93 (300)
T 2qc5_A 78 TENGANKIGKLSKK-GG 93 (300)
T ss_dssp EETTTTEEEEECTT-SC
T ss_pred EecCCCeEEEECCC-CC
Confidence 66667788888876 44
No 194
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.86 E-value=0.00043 Score=45.84 Aligned_cols=81 Identities=12% Similarity=0.116 Sum_probs=61.3
Q ss_pred CCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCcee----ccCCCcEEEEEecCCcceeeeeeecccEEEEecCCCcEEEE
Q 036317 13 SDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTLP----VSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSVYAW 88 (106)
Q Consensus 13 ~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~~----~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~~w 88 (106)
..+..++++|+|+.+++...++.|.+||....... .....+..++++++| ...++...++.|.+|
T Consensus 150 ~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g-----------~l~v~~~~~~~v~~~ 218 (270)
T 1rwi_B 150 NDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAG-----------TVYVTEHNTNQVVKL 218 (270)
T ss_dssp CSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTC-----------CEEEEETTTSCEEEE
T ss_pred CCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCC-----------CEEEEECCCCcEEEE
Confidence 36789999999997777667889999998776551 122456779999999 888888788899999
Q ss_pred ECCCCC----------CCcEEEeCCC
Q 036317 89 SARSGK----------EPPVIKWAPG 104 (106)
Q Consensus 89 d~~~~~----------~v~~i~~sp~ 104 (106)
|..... .+..+.++|+
T Consensus 219 ~~~~~~~~~~~~~~~~~p~~i~~~~~ 244 (270)
T 1rwi_B 219 LAGSTTSTVLPFTGLNTPLAVAVDSD 244 (270)
T ss_dssp CTTCSCCEECCCCSCSCEEEEEECTT
T ss_pred cCCCCcceeeccCCCCCceeEEECCC
Confidence 987543 3566777664
No 195
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=97.85 E-value=0.00012 Score=52.38 Aligned_cols=68 Identities=9% Similarity=-0.051 Sum_probs=52.5
Q ss_pred EEEECCCCCeEEEEe----------CCCeEEEEEcCCCce----ecc-------CCCcEEEEEecCCcceeeeeeecccE
Q 036317 17 EVKLSNDGRLMLLTT----------LEGHIHVLHSFQGTL----PVS-------HNSTLEASFSQHLSLVALSVLILRSW 75 (106)
Q Consensus 17 ~v~~spdg~~l~~~~----------~~~~i~l~d~~~~~~----~~~-------~~~~~~~~fs~d~~~~~~~~~~~~~~ 75 (106)
.+++||||++++++. .++.+.++|..+.+. +.. ...+..+.|+||| ++
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG-----------~~ 138 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNN-----------AD 138 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCC-----------CE
Confidence 999999999998876 367899999988766 111 1234468999999 98
Q ss_pred EEEecC--CCcEEEEECCCCCCC
Q 036317 76 VLEGSG--DGSVYAWSARSGKEP 96 (106)
Q Consensus 76 i~t~s~--d~~i~~wd~~~~~~v 96 (106)
++.++. +++|.++| ++++.+
T Consensus 139 l~v~n~~~~~~v~viD-~t~~~~ 160 (373)
T 2mad_H 139 LLFFQFAAGPAVGLVV-QGGSSD 160 (373)
T ss_pred EEEEecCCCCeEEEEE-CCCCEE
Confidence 888764 47899999 988733
No 196
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.85 E-value=4.8e-05 Score=58.41 Aligned_cols=90 Identities=9% Similarity=0.025 Sum_probs=56.3
Q ss_pred CeeEEEECCCCCeEEEEeCC-----CeEEEEEcCCCce-ec--cCCCcEEEEEecCCcceeeeeeeccc---EEEEecCC
Q 036317 14 DANEVKLSNDGRLMLLTTLE-----GHIHVLHSFQGTL-PV--SHNSTLEASFSQHLSLVALSVLILRS---WVLEGSGD 82 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~~~~~-----~~i~l~d~~~~~~-~~--~~~~~~~~~fs~d~~~~~~~~~~~~~---~i~t~s~d 82 (106)
.+..++|||||++++.+..+ .+|++||+.+++. .. .......++|+|| +.|++....... .+-.....
T Consensus 164 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~ 242 (741)
T 1yr2_A 164 ALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYN 242 (741)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCCC
T ss_pred EEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCC
Confidence 57789999999999877654 4699999999987 21 1111235789999 666665422110 00001123
Q ss_pred CcEEEEECCCCC--------------CCcEEEeCCC
Q 036317 83 GSVYAWSARSGK--------------EPPVIKWAPG 104 (106)
Q Consensus 83 ~~i~~wd~~~~~--------------~v~~i~~sp~ 104 (106)
..|++|++.+++ .+..+.|||+
T Consensus 243 ~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpD 278 (741)
T 1yr2_A 243 QTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSD 278 (741)
T ss_dssp CEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTT
T ss_pred CEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCC
Confidence 468889887664 2456677775
No 197
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=97.84 E-value=2.9e-05 Score=59.40 Aligned_cols=70 Identities=16% Similarity=0.148 Sum_probs=49.6
Q ss_pred CCeeEEEECCCCCeEEEEeC-----CCeEEEEEcCCCce-eccCCC--cEEEEEecCCcceeeeeeecccEEEEecCCC-
Q 036317 13 SDANEVKLSNDGRLMLLTTL-----EGHIHVLHSFQGTL-PVSHNS--TLEASFSQHLSLVALSVLILRSWVLEGSGDG- 83 (106)
Q Consensus 13 ~~v~~v~~spdg~~l~~~~~-----~~~i~l~d~~~~~~-~~~~~~--~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~- 83 (106)
..+..++|||||++++-+.. ..+|+++|+.+++. ...... ...++|+ |+ +.|+.++.+.
T Consensus 129 ~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg-----------~~l~y~~~~~~ 196 (693)
T 3iuj_A 129 TALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GN-----------EGFFYSSYDKP 196 (693)
T ss_dssp CEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TT-----------TEEEEEESSCC
T ss_pred EEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEe-CC-----------CEEEEEEecCc
Confidence 36888999999999885432 25799999999986 211111 2347899 99 7766666553
Q ss_pred ------------cEEEEECCCCC
Q 036317 84 ------------SVYAWSARSGK 94 (106)
Q Consensus 84 ------------~i~~wd~~~~~ 94 (106)
.|++|++.+++
T Consensus 197 ~~~~~~~~~~~~~v~~~~lgt~~ 219 (693)
T 3iuj_A 197 DGSELSARTDQHKVYFHRLGTAQ 219 (693)
T ss_dssp C-------CCCCEEEEEETTSCG
T ss_pred ccccccccCCCcEEEEEECCCCc
Confidence 49999987764
No 198
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=97.83 E-value=5e-05 Score=57.87 Aligned_cols=68 Identities=13% Similarity=0.033 Sum_probs=50.2
Q ss_pred eEEEECCCCCeEEEEeCCCe-------------EEEEEcCCCce------e--ccCCCcEEEEEecCCcceeeeeeeccc
Q 036317 16 NEVKLSNDGRLMLLTTLEGH-------------IHVLHSFQGTL------P--VSHNSTLEASFSQHLSLVALSVLILRS 74 (106)
Q Consensus 16 ~~v~~spdg~~l~~~~~~~~-------------i~l~d~~~~~~------~--~~~~~~~~~~fs~d~~~~~~~~~~~~~ 74 (106)
..++|+|||+.++.++.+.. |++|++.++.. . .+......+.||||| +
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG-----------~ 239 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDG-----------K 239 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTS-----------C
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCC-----------C
Confidence 68999999999999988765 99999988762 1 122356789999999 7
Q ss_pred EEEEecCCC----cEEEEECCCCC
Q 036317 75 WVLEGSGDG----SVYAWSARSGK 94 (106)
Q Consensus 75 ~i~t~s~d~----~i~~wd~~~~~ 94 (106)
+|+..+.++ .|++|+..+++
T Consensus 240 ~l~~~~~~~~~~~~l~~~~~~~~~ 263 (695)
T 2bkl_A 240 YLFVYILRGWSENDVYWKRPGEKD 263 (695)
T ss_dssp CEEEEEEETTTEEEEEEECTTCSS
T ss_pred EEEEEEeCCCCceEEEEEcCCCCc
Confidence 666665444 67777665544
No 199
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.82 E-value=0.00018 Score=50.14 Aligned_cols=68 Identities=4% Similarity=0.022 Sum_probs=52.1
Q ss_pred CeeEEEECCCCCeEEEEeCC----------CeEEEEEcCCCcee----cc-CCCcEEEEEecCCcceeeeeeecccEEEE
Q 036317 14 DANEVKLSNDGRLMLLTTLE----------GHIHVLHSFQGTLP----VS-HNSTLEASFSQHLSLVALSVLILRSWVLE 78 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~~~~~----------~~i~l~d~~~~~~~----~~-~~~~~~~~fs~d~~~~~~~~~~~~~~i~t 78 (106)
....+.++|+|+++++...+ +.+.++|..++++. .. ...+..++|+||+ +++..
T Consensus 173 ~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~-----------~~lyv 241 (328)
T 3dsm_A 173 QPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTR-----------DTLYW 241 (328)
T ss_dssp CBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTS-----------CEEEE
T ss_pred CccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCC-----------CEEEE
Confidence 45688999999966665544 78999999988871 11 1256789999999 88777
Q ss_pred ecCCCcEEEEECCCCC
Q 036317 79 GSGDGSVYAWSARSGK 94 (106)
Q Consensus 79 ~s~d~~i~~wd~~~~~ 94 (106)
+.. .|++||.++++
T Consensus 242 ~~~--~v~~~d~~t~~ 255 (328)
T 3dsm_A 242 INN--DIWRMPVEADR 255 (328)
T ss_dssp ESS--SEEEEETTCSS
T ss_pred Ecc--EEEEEECCCCc
Confidence 654 89999998876
No 200
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=97.76 E-value=0.00014 Score=55.10 Aligned_cols=71 Identities=11% Similarity=0.071 Sum_probs=54.3
Q ss_pred CCCCCeEEEEeCCCeEEEEEcCCCce--eccC-CCcEEEEEecCCcceeeeeeecccEEEEecCCCcEEEEECC--CCC-
Q 036317 21 SNDGRLMLLTTLEGHIHVLHSFQGTL--PVSH-NSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSVYAWSAR--SGK- 94 (106)
Q Consensus 21 spdg~~l~~~~~~~~i~l~d~~~~~~--~~~~-~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~~wd~~--~~~- 94 (106)
+|++..+++...++++.++|..++++ .... ..+..+.||||| +++..++.|+.|.+||+. +++
T Consensus 164 d~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDG-----------r~lyv~~~dg~V~viD~~~~t~~~ 232 (567)
T 1qks_A 164 DLENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASG-----------RYLFVIGRDGKVNMIDLWMKEPTT 232 (567)
T ss_dssp CGGGEEEEEETTTTEEEEEETTTCCEEEEEECSSCEEEEEECTTS-----------CEEEEEETTSEEEEEETTSSSCCE
T ss_pred CCCceEEEEeCCCCeEEEEECCCCeEEEEEeCCCCccceEECCCC-----------CEEEEEcCCCeEEEEECCCCCCcE
Confidence 35556666777889999999999987 1111 233468999999 999999999999999995 666
Q ss_pred --------CCcEEEeC
Q 036317 95 --------EPPVIKWA 102 (106)
Q Consensus 95 --------~v~~i~~s 102 (106)
..+.+.|+
T Consensus 233 v~~i~~G~~P~~ia~s 248 (567)
T 1qks_A 233 VAEIKIGSEARSIETS 248 (567)
T ss_dssp EEEEECCSEEEEEEEC
T ss_pred eEEEecCCCCceeEEc
Confidence 44667777
No 201
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.73 E-value=0.00018 Score=49.38 Aligned_cols=74 Identities=7% Similarity=0.110 Sum_probs=58.5
Q ss_pred CeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce---eccCCCcEEEEEecCCcceeeeeeecccEEEEecCCCcEEEEEC
Q 036317 14 DANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL---PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSVYAWSA 90 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~---~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~~wd~ 90 (106)
....+.+.++|+++++...++.+..||.. |+. ......+..+...++| +.+++++.++.|..+|.
T Consensus 126 ~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~~~~~~~~~~~g-----------~~~v~~~~~~~v~~~d~ 193 (276)
T 3no2_A 126 QFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLSGTPFSSAFLDNG-----------DCLVACGDAHCFVQLNL 193 (276)
T ss_dssp SCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECSSCCCEEEECTTS-----------CEEEECBTTSEEEEECT
T ss_pred cccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECCCCccceeEcCCC-----------CEEEEeCCCCeEEEEeC
Confidence 45566788999999998899999999997 877 2222345567788999 99999988889999999
Q ss_pred CCCCCCcEE
Q 036317 91 RSGKEPPVI 99 (106)
Q Consensus 91 ~~~~~v~~i 99 (106)
++|+.+..+
T Consensus 194 ~tG~~~w~~ 202 (276)
T 3no2_A 194 ESNRIVRRV 202 (276)
T ss_dssp TTCCEEEEE
T ss_pred cCCcEEEEe
Confidence 999844433
No 202
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.70 E-value=0.00028 Score=49.09 Aligned_cols=70 Identities=16% Similarity=0.173 Sum_probs=52.8
Q ss_pred CeeEEEECCCCCeEEEEeCCCeEEEEEcCCCcee---c-c--CCCcEEEEEecC-CcceeeeeeecccEEEEe----cCC
Q 036317 14 DANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTLP---V-S--HNSTLEASFSQH-LSLVALSVLILRSWVLEG----SGD 82 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~~---~-~--~~~~~~~~fs~d-~~~~~~~~~~~~~~i~t~----s~d 82 (106)
..+.++|+||++++.++.. .+.++|..++++. . . ...+..++++|+ + +..++. ..+
T Consensus 226 ~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g-----------~lyva~~~~y~~~ 292 (328)
T 3dsm_A 226 WPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNG-----------EVYVADAIDYQQQ 292 (328)
T ss_dssp CCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTC-----------CEEEEECTTSSSE
T ss_pred CceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCC-----------eEEEEcccccccC
Confidence 5789999999998887665 8999999888761 1 1 235667999994 5 555555 568
Q ss_pred CcEEEEECCCCCCCc
Q 036317 83 GSVYAWSARSGKEPP 97 (106)
Q Consensus 83 ~~i~~wd~~~~~~v~ 97 (106)
+.|.+||.+ |+.+.
T Consensus 293 ~~V~v~d~~-g~~~~ 306 (328)
T 3dsm_A 293 GIVYRYSPQ-GKLID 306 (328)
T ss_dssp EEEEEECTT-CCEEE
T ss_pred CEEEEECCC-CCEEE
Confidence 899999998 87333
No 203
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.69 E-value=0.0005 Score=45.52 Aligned_cols=71 Identities=11% Similarity=0.148 Sum_probs=55.9
Q ss_pred CCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce---e-ccCCCcEEEEEecCCcceeeeeeecccEEEEecCCCcEEEE
Q 036317 13 SDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL---P-VSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSVYAW 88 (106)
Q Consensus 13 ~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~---~-~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~~w 88 (106)
..+..++++++|+.+++...++.+.+||...... . .....+..+.++++| +..++...++.|+++
T Consensus 192 ~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g-----------~l~v~~~~~~~v~~~ 260 (270)
T 1rwi_B 192 TAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDR-----------TVYVADRGNDRVVKL 260 (270)
T ss_dssp CSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTC-----------CEEEEEGGGTEEEEE
T ss_pred CCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCC-----------CEEEEECCCCEEEEE
Confidence 4688999999998667766788999999866544 1 122456789999999 988888899999999
Q ss_pred ECCCCC
Q 036317 89 SARSGK 94 (106)
Q Consensus 89 d~~~~~ 94 (106)
++...+
T Consensus 261 ~~~~~~ 266 (270)
T 1rwi_B 261 TSLEHH 266 (270)
T ss_dssp CCCGGG
T ss_pred cCCCcc
Confidence 987643
No 204
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=97.69 E-value=0.00081 Score=45.38 Aligned_cols=69 Identities=13% Similarity=0.224 Sum_probs=53.8
Q ss_pred CCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce----eccCCCcEEEEEecCCcceeeeeeecccEE-EEecCCCcEEE
Q 036317 13 SDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVALSVLILRSWV-LEGSGDGSVYA 87 (106)
Q Consensus 13 ~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i-~t~s~d~~i~~ 87 (106)
.....++++++|+.+++...++.|.+||..+++. ......+..++|+|++ ++| ++...++.|..
T Consensus 226 ~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg-----------~~l~v~~~~~~~l~~ 294 (314)
T 1pjx_A 226 GGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQT-----------KTIFVTEHENNAVWK 294 (314)
T ss_dssp CEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTS-----------SEEEEEETTTTEEEE
T ss_pred CCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCC-----------CEEEEEeCCCCeEEE
Confidence 4578899999999877777889999999886665 2233566789999999 844 55566789999
Q ss_pred EECCC
Q 036317 88 WSARS 92 (106)
Q Consensus 88 wd~~~ 92 (106)
++++.
T Consensus 295 ~~~~~ 299 (314)
T 1pjx_A 295 FEWQR 299 (314)
T ss_dssp EECSS
T ss_pred EeCCC
Confidence 99875
No 205
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.69 E-value=0.0017 Score=43.27 Aligned_cols=75 Identities=11% Similarity=0.020 Sum_probs=53.7
Q ss_pred eeecCCCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce-----eccCCCcEEEEEecCCcceeeeeeecccEEEEe
Q 036317 5 IFSDGGDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL-----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEG 79 (106)
Q Consensus 5 ~~~~~~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~-----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~ 79 (106)
.+.+......+..++++++|+.+++...++.+..+|.. ++. +.....+..+.+++++ +..++.
T Consensus 54 ~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g-----------~l~v~~ 121 (300)
T 2qc5_A 54 EFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNG-----------DIWFTQ 121 (300)
T ss_dssp EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTT-----------CEEEEE
T ss_pred EEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCC-----------CEEEEc
Confidence 34443334578999999999977776667889999987 655 1122456678899999 777776
Q ss_pred cCCCcEEEEECC
Q 036317 80 SGDGSVYAWSAR 91 (106)
Q Consensus 80 s~d~~i~~wd~~ 91 (106)
..++.|..+|.+
T Consensus 122 ~~~~~i~~~~~~ 133 (300)
T 2qc5_A 122 LNGDRIGKLTAD 133 (300)
T ss_dssp TTTTEEEEECTT
T ss_pred cCCCeEEEECCC
Confidence 666778888766
No 206
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.67 E-value=0.00026 Score=51.00 Aligned_cols=65 Identities=14% Similarity=0.096 Sum_probs=49.7
Q ss_pred EEECCCCCeEEEEeC---------CCeEEEEEcCCCce----eccCCCcEEEEEecCCcceeeeeeecccE-EEEec-CC
Q 036317 18 VKLSNDGRLMLLTTL---------EGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVALSVLILRSW-VLEGS-GD 82 (106)
Q Consensus 18 v~~spdg~~l~~~~~---------~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~-i~t~s-~d 82 (106)
++++|||+++.++.. ++.+.++|..+++. +... .+..+.|+||| ++ +++.. .+
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg-----------~~l~va~~~~~ 336 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDG-----------ASDNYANSAGT 336 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSS-----------SCEEEEEETTT
T ss_pred eEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCC-----------CEEEEEccCCC
Confidence 789999998887643 24677999999887 1111 35679999999 74 45555 58
Q ss_pred CcEEEEECCCCC
Q 036317 83 GSVYAWSARSGK 94 (106)
Q Consensus 83 ~~i~~wd~~~~~ 94 (106)
++|.++|+++++
T Consensus 337 ~~VsVID~~t~k 348 (368)
T 1mda_H 337 EVLDIYDAASDQ 348 (368)
T ss_dssp TEEEEEESSSCE
T ss_pred CeEEEEECCCCc
Confidence 999999999988
No 207
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.57 E-value=0.00015 Score=53.30 Aligned_cols=70 Identities=7% Similarity=-0.068 Sum_probs=54.6
Q ss_pred EEEECCCCCeEEEEe----------CCCeEEEEEcCCCce----ecc-------CCCcEEEEEecCCcceeeeeeecccE
Q 036317 17 EVKLSNDGRLMLLTT----------LEGHIHVLHSFQGTL----PVS-------HNSTLEASFSQHLSLVALSVLILRSW 75 (106)
Q Consensus 17 ~v~~spdg~~l~~~~----------~~~~i~l~d~~~~~~----~~~-------~~~~~~~~fs~d~~~~~~~~~~~~~~ 75 (106)
.+++||||++++++. .++.|.++|..+++. ... ...+..+.|+||| ++
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDG-----------k~ 190 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDN-----------KN 190 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTS-----------SE
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCC-----------CE
Confidence 899999999998876 367899999999887 111 1234468999999 88
Q ss_pred EEEecC--CCcEEEEECCCCCCCc
Q 036317 76 VLEGSG--DGSVYAWSARSGKEPP 97 (106)
Q Consensus 76 i~t~s~--d~~i~~wd~~~~~~v~ 97 (106)
+..++. +++|.+.|+++++.+.
T Consensus 191 lyV~n~~~~~~VsVID~~t~kvv~ 214 (426)
T 3c75_H 191 LLFYQFSPAPAVGVVDLEGKTFDR 214 (426)
T ss_dssp EEEEECSSSCEEEEEETTTTEEEE
T ss_pred EEEEecCCCCeEEEEECCCCeEEE
Confidence 887764 5789999999988433
No 208
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.56 E-value=0.00078 Score=46.11 Aligned_cols=80 Identities=9% Similarity=0.113 Sum_probs=55.1
Q ss_pred eecCCCC-CCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce----ecc-CCCcEEEEEecCCcceeeeeeecccEEEEe
Q 036317 6 FSDGGDV-SDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL----PVS-HNSTLEASFSQHLSLVALSVLILRSWVLEG 79 (106)
Q Consensus 6 ~~~~~~~-~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~----~~~-~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~ 79 (106)
|++..+. ..+.++.++|+|+.++ +.++.+..+|. +|+. ... ...+..+.+.+|| +++++.
T Consensus 29 w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG-----------~~lv~~ 94 (276)
T 3no2_A 29 WEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDG-----------NALVAW 94 (276)
T ss_dssp EEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTS-----------CEEEEE
T ss_pred EEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccccEECCCC-----------CEEEEe
Confidence 4443333 3689999999999777 46788999999 7876 212 1234568899999 888887
Q ss_pred cC-CCcEEEEECCCCCCCcEEE
Q 036317 80 SG-DGSVYAWSARSGKEPPVIK 100 (106)
Q Consensus 80 s~-d~~i~~wd~~~~~~v~~i~ 100 (106)
+. ++.+..+|. +|+.+..+.
T Consensus 95 ~~~~~~v~~vd~-~Gk~l~~~~ 115 (276)
T 3no2_A 95 CGHPSTILEVNM-KGEVLSKTE 115 (276)
T ss_dssp ESTTEEEEEECT-TSCEEEEEE
T ss_pred cCCCCEEEEEeC-CCCEEEEEe
Confidence 76 667777665 566444433
No 209
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=97.52 E-value=0.00036 Score=50.71 Aligned_cols=65 Identities=9% Similarity=-0.001 Sum_probs=50.2
Q ss_pred CCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCceeccCCCcEEEEEecCCcceeeeeeecccEEEEecCCCcEEEEECCC
Q 036317 13 SDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTLPVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSVYAWSARS 92 (106)
Q Consensus 13 ~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~~wd~~~ 92 (106)
..+.++.+.+.. +++++.+|++.+||+.++........+.+++|||+| .. .|..||++++|+...
T Consensus 127 ~~v~~i~~~~p~--~av~~~dG~L~v~dl~~~~~~~~~~~Vs~v~WSpkG-----------~~--vg~~dg~i~~~~~~~ 191 (388)
T 1xip_A 127 KPVFQLKNVNNT--LVILNSVNDLSALDLRTKSTKQLAQNVTSFDVTNSQ-----------LA--VLLKDRSFQSFAWRN 191 (388)
T ss_dssp SCEEEEEECSSE--EEEEETTSEEEEEETTTCCEEEEEESEEEEEECSSE-----------EE--EEETTSCEEEEEEET
T ss_pred cceeeEEecCCC--EEEEECCCCEEEEEccCCccccccCCceEEEEcCCc-----------eE--EEEcCCcEEEEcCCC
Confidence 357777776553 888899999999999887763344467789999999 54 477789999996654
No 210
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=97.52 E-value=0.0016 Score=44.52 Aligned_cols=69 Identities=12% Similarity=0.033 Sum_probs=51.1
Q ss_pred CCeeEEEECCCCCeE-EEEeCCCeEEEEEcCCCce---eccCCCcEEEEEecCCcceeeeeeecccEEEEecCCCcEEEE
Q 036317 13 SDANEVKLSNDGRLM-LLTTLEGHIHVLHSFQGTL---PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSVYAW 88 (106)
Q Consensus 13 ~~v~~v~~spdg~~l-~~~~~~~~i~l~d~~~~~~---~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~~w 88 (106)
.......|+|+|+.+ .+...++.+..|+. +++. ......+..+.++++| +.+++...++.|.+|
T Consensus 45 ~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~~~~~~~~~~~~gl~~d~dG-----------~l~v~~~~~~~v~~~ 112 (305)
T 3dr2_A 45 TWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGTVDVLLDATAFTNGNAVDAQQ-----------RLVHCEHGRRAITRS 112 (305)
T ss_dssp SSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSCEEEEEESCSCEEEEEECTTS-----------CEEEEETTTTEEEEE
T ss_pred cCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCCEEEEeCCCCccceeeECCCC-----------CEEEEECCCCEEEEE
Confidence 466789999999954 55567789999998 5554 2334456779999999 877766666788888
Q ss_pred ECCCCC
Q 036317 89 SARSGK 94 (106)
Q Consensus 89 d~~~~~ 94 (106)
+.+ |+
T Consensus 113 ~~~-g~ 117 (305)
T 3dr2_A 113 DAD-GQ 117 (305)
T ss_dssp CTT-SC
T ss_pred CCC-CC
Confidence 875 44
No 211
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.48 E-value=0.00021 Score=52.49 Aligned_cols=72 Identities=15% Similarity=0.166 Sum_probs=55.1
Q ss_pred EEEECCCCCeEEEEeC----------CCeEEEEEcCCCcee--cc-CCCcEEEEEecCCcceeeeeeeccc-EEEEec-C
Q 036317 17 EVKLSNDGRLMLLTTL----------EGHIHVLHSFQGTLP--VS-HNSTLEASFSQHLSLVALSVLILRS-WVLEGS-G 81 (106)
Q Consensus 17 ~v~~spdg~~l~~~~~----------~~~i~l~d~~~~~~~--~~-~~~~~~~~fs~d~~~~~~~~~~~~~-~i~t~s-~ 81 (106)
.++++|||+++.++.. ++++.++|..+.+.. -. ...+..+.|+||+ + .+++.. .
T Consensus 323 ~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~P~gia~spDg-----------~~~lyv~n~~ 391 (426)
T 3c75_H 323 QTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGHEIDSINVSQDA-----------EPLLYALSAG 391 (426)
T ss_dssp CEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECCSS-----------SCEEEEEETT
T ss_pred eeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCCCcCeEEEccCC-----------CEEEEEEcCC
Confidence 3789999998877653 357999999999871 11 1135679999999 8 777777 5
Q ss_pred CCcEEEEECCCCCCCcEE
Q 036317 82 DGSVYAWSARSGKEPPVI 99 (106)
Q Consensus 82 d~~i~~wd~~~~~~v~~i 99 (106)
+++|.++|+.+++.+..|
T Consensus 392 s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 392 TQTLHIYDAATGEELRSV 409 (426)
T ss_dssp TTEEEEEETTTCCEEEEE
T ss_pred CCeEEEEECCCCCEEEEe
Confidence 899999999999855554
No 212
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.43 E-value=0.00061 Score=49.51 Aligned_cols=72 Identities=19% Similarity=0.157 Sum_probs=53.4
Q ss_pred CeeEEEECCCCCeEEEEeC----------CCeEEEEEcCCCceec---cCCCcEEEEEecCCcceeeeeeeccc-EEEEe
Q 036317 14 DANEVKLSNDGRLMLLTTL----------EGHIHVLHSFQGTLPV---SHNSTLEASFSQHLSLVALSVLILRS-WVLEG 79 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~~~~----------~~~i~l~d~~~~~~~~---~~~~~~~~~fs~d~~~~~~~~~~~~~-~i~t~ 79 (106)
....++++|+++.+.+... .++|.++|..++++.. -...+..+.+++|+ + .+++.
T Consensus 281 g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~~~~~lavs~D~-----------~~~ly~t 349 (386)
T 3sjl_D 281 GWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDE-----------KPLLYAL 349 (386)
T ss_dssp SSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECSSS-----------SCEEEEE
T ss_pred CcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCCCcceEEECCCC-----------CeEEEEE
Confidence 3445888999998887753 2579999999998811 11244579999999 7 55554
Q ss_pred -cCCCcEEEEECCCCCCC
Q 036317 80 -SGDGSVYAWSARSGKEP 96 (106)
Q Consensus 80 -s~d~~i~~wd~~~~~~v 96 (106)
..+++|.++|..+++.+
T Consensus 350 n~~~~~VsViD~~t~k~~ 367 (386)
T 3sjl_D 350 STGDKTLYIHDAESGEEL 367 (386)
T ss_dssp ETTTTEEEEEETTTCCEE
T ss_pred cCCCCeEEEEECCCCcEE
Confidence 55889999999999933
No 213
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=97.41 E-value=0.0012 Score=44.52 Aligned_cols=80 Identities=11% Similarity=0.258 Sum_probs=58.0
Q ss_pred CeeEEEEC----CCCCeEEEE-eCCCeEEEEEcC-CCce---------eccC-CCcEEEEEecCCcceeeeeeecccEEE
Q 036317 14 DANEVKLS----NDGRLMLLT-TLEGHIHVLHSF-QGTL---------PVSH-NSTLEASFSQHLSLVALSVLILRSWVL 77 (106)
Q Consensus 14 ~v~~v~~s----pdg~~l~~~-~~~~~i~l~d~~-~~~~---------~~~~-~~~~~~~fs~d~~~~~~~~~~~~~~i~ 77 (106)
..+.++++ |||+.+.++ ..++.+.+||.. +++. .... ..+..++++++| +..+
T Consensus 173 ~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G-----------~l~v 241 (314)
T 1pjx_A 173 FPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDN-----------NLLV 241 (314)
T ss_dssp SEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTC-----------CEEE
T ss_pred CcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCC-----------CEEE
Confidence 45788999 999766555 567899999976 4542 1111 345678999999 8888
Q ss_pred EecCCCcEEEEECCCCC----------CCcEEEeCCC
Q 036317 78 EGSGDGSVYAWSARSGK----------EPPVIKWAPG 104 (106)
Q Consensus 78 t~s~d~~i~~wd~~~~~----------~v~~i~~sp~ 104 (106)
+...++.|.+||.++++ .+.++.|+|+
T Consensus 242 ~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~d 278 (314)
T 1pjx_A 242 ANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQ 278 (314)
T ss_dssp EEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTT
T ss_pred EEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCC
Confidence 87778899999998666 4566666664
No 214
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.38 E-value=0.0006 Score=52.32 Aligned_cols=66 Identities=14% Similarity=0.125 Sum_probs=48.0
Q ss_pred eEEEECCCCCeEEEEeCCCe--------------EEEEEcCCCce------ec--cCCCcEEEEEecCCcceeeeeeecc
Q 036317 16 NEVKLSNDGRLMLLTTLEGH--------------IHVLHSFQGTL------PV--SHNSTLEASFSQHLSLVALSVLILR 73 (106)
Q Consensus 16 ~~v~~spdg~~l~~~~~~~~--------------i~l~d~~~~~~------~~--~~~~~~~~~fs~d~~~~~~~~~~~~ 73 (106)
..++|+|| +.++.+..+.. +++|++.++.. .. +......+.|||||
T Consensus 212 ~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG----------- 279 (741)
T 1yr2_A 212 SGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDG----------- 279 (741)
T ss_dssp CCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTS-----------
T ss_pred ccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCC-----------
Confidence 57889999 98988876543 88999877652 11 11246689999999
Q ss_pred cEEEEecCC-----CcEEEEECCCC
Q 036317 74 SWVLEGSGD-----GSVYAWSARSG 93 (106)
Q Consensus 74 ~~i~t~s~d-----~~i~~wd~~~~ 93 (106)
++|+..+.+ ..|++||+.++
T Consensus 280 ~~l~~~~~~~~~~~~~l~~~d~~~~ 304 (741)
T 1yr2_A 280 RWVVITSSEGTDPVNTVHVARVTNG 304 (741)
T ss_dssp CEEEEEEECTTCSCCEEEEEEEETT
T ss_pred CEEEEEEEccCCCcceEEEEECCCC
Confidence 777666543 38999999876
No 215
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.34 E-value=0.00027 Score=50.22 Aligned_cols=63 Identities=19% Similarity=0.409 Sum_probs=40.6
Q ss_pred CCCeEEEEeCCCeEEEEEcCCCce--eccCCCcEEEEEecCCcceeeeeeecccEEEEecCCCcEEEEECCCCCCC
Q 036317 23 DGRLMLLTTLEGHIHVLHSFQGTL--PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSVYAWSARSGKEP 96 (106)
Q Consensus 23 dg~~l~~~~~~~~i~l~d~~~~~~--~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~~wd~~~~~~v 96 (106)
++..+++++.++.++.||..+|+. ....+.+....+..++ +.+++++.|+.++.||.++|+.+
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~~~~~s~p~~~~g-----------~~~v~~s~dg~l~a~d~~tG~~~ 72 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKEDPVLQVPTHVEE-----------PAFLPDPNDGSLYTLGSKNNEGL 72 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEECCCSCCCC----------------CCEEECTTTCCEEEC-----CCS
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecCCCceecceEcCC-----------CEEEEeCCCCEEEEEECCCCcee
Confidence 577799999999999999999988 2111334334445677 77888889999999999998844
No 216
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=97.28 E-value=0.0035 Score=42.71 Aligned_cols=68 Identities=7% Similarity=0.012 Sum_probs=49.7
Q ss_pred CeeEEEECCCCCeE-EEEeCCCeEEEEEcCCCce--eccCCCcEEEEEecCCcceeeeeeecccEEEEecCCCcEEEEEC
Q 036317 14 DANEVKLSNDGRLM-LLTTLEGHIHVLHSFQGTL--PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSVYAWSA 90 (106)
Q Consensus 14 ~v~~v~~spdg~~l-~~~~~~~~i~l~d~~~~~~--~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~~wd~ 90 (106)
--....|+|+++.+ .+...++.|+.||..+++. ......+..+.++++| +++++. +..|.+||.
T Consensus 14 ~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~dG-----------~l~v~~--~~~l~~~d~ 80 (297)
T 3g4e_A 14 CGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVTMDAPVSSVALRQSG-----------GYVATI--GTKFCALNW 80 (297)
T ss_dssp BEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECSSCEEEEEEBTTS-----------SEEEEE--TTEEEEEET
T ss_pred cccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEEeCCCceEEEEECCCC-----------CEEEEE--CCeEEEEEC
Confidence 45688999965544 5556789999999988776 2233456779999999 755554 457888988
Q ss_pred CCCC
Q 036317 91 RSGK 94 (106)
Q Consensus 91 ~~~~ 94 (106)
++++
T Consensus 81 ~~g~ 84 (297)
T 3g4e_A 81 KEQS 84 (297)
T ss_dssp TTTE
T ss_pred CCCc
Confidence 8765
No 217
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=97.23 E-value=0.0048 Score=42.72 Aligned_cols=79 Identities=14% Similarity=0.098 Sum_probs=55.3
Q ss_pred CeeEEEECCCCCeEEEE-eCCCeEEEEEcC--CC-ce------ec---cCCCcEEEEEecCCcceeeeeeecccEEEEec
Q 036317 14 DANEVKLSNDGRLMLLT-TLEGHIHVLHSF--QG-TL------PV---SHNSTLEASFSQHLSLVALSVLILRSWVLEGS 80 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~~-~~~~~i~l~d~~--~~-~~------~~---~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s 80 (106)
..+.++|+|||+.++.+ ..++.|.+||.. ++ ++ .. ....+..+.++++| ...++..
T Consensus 180 ~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G-----------~lwva~~ 248 (326)
T 2ghs_A 180 IPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEG-----------HIWNARW 248 (326)
T ss_dssp SEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTS-----------CEEEEEE
T ss_pred ccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCC-----------CEEEEEe
Confidence 45789999999977555 457899999975 66 43 11 12334568889999 7766665
Q ss_pred CCCcEEEEECCCCC----------CCcEEEeC-CC
Q 036317 81 GDGSVYAWSARSGK----------EPPVIKWA-PG 104 (106)
Q Consensus 81 ~d~~i~~wd~~~~~----------~v~~i~~s-p~ 104 (106)
.++.|.+||. +++ .+.+++|+ |+
T Consensus 249 ~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d 282 (326)
T 2ghs_A 249 GEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPD 282 (326)
T ss_dssp TTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTT
T ss_pred CCCEEEEECC-CCCEEEEEECCCCCcEEEEEecCC
Confidence 6678999988 455 46677776 54
No 218
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.21 E-value=0.0015 Score=45.65 Aligned_cols=80 Identities=8% Similarity=0.066 Sum_probs=55.1
Q ss_pred CeeEEEECCCCCeEEEEeCCC-eEEEEEcC---CCce-----------eccCCCcEEEEEecCCcceeeeeeecccEEEE
Q 036317 14 DANEVKLSNDGRLMLLTTLEG-HIHVLHSF---QGTL-----------PVSHNSTLEASFSQHLSLVALSVLILRSWVLE 78 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~~~~~~-~i~l~d~~---~~~~-----------~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t 78 (106)
.++.++|||||+.|+.+...+ .+..++.. .+.. ....+.+..++++++| ...++
T Consensus 196 ~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G-----------~l~va 264 (343)
T 2qe8_A 196 GVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDH-----------NIYVG 264 (343)
T ss_dssp CEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTC-----------CEEEE
T ss_pred ccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCC-----------CEEEE
Confidence 368999999999888776554 55555532 1111 1122344568999999 98888
Q ss_pred ecCCCcEEEEECCCCC-----------CCcEEEeCCC
Q 036317 79 GSGDGSVYAWSARSGK-----------EPPVIKWAPG 104 (106)
Q Consensus 79 ~s~d~~i~~wd~~~~~-----------~v~~i~~sp~ 104 (106)
...++.|.+||.++|+ .+..++|+|+
T Consensus 265 ~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~ 301 (343)
T 2qe8_A 265 DLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSD 301 (343)
T ss_dssp EGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTT
T ss_pred ccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCC
Confidence 8889999999986665 3556677653
No 219
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=97.19 E-value=0.0041 Score=43.10 Aligned_cols=68 Identities=12% Similarity=0.100 Sum_probs=49.4
Q ss_pred CeeEEEECCCCCeE-EEEeCCCeEEEEEcCCCcee--ccCCCcEEEEEecCCcceeeeeeecccEEEEecCCCcEEEEEC
Q 036317 14 DANEVKLSNDGRLM-LLTTLEGHIHVLHSFQGTLP--VSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSVYAWSA 90 (106)
Q Consensus 14 ~v~~v~~spdg~~l-~~~~~~~~i~l~d~~~~~~~--~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~~wd~ 90 (106)
-.....|+|+++.+ .+...++.|+.||..+++.. .....+..+.++++| +++++. .+ .|++||.
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~~v~~i~~~~dg-----------~l~v~~-~~-gl~~~d~ 116 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKTVHALPFMGSALAKISDS-----------KQLIAS-DD-GLFLRDT 116 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEECSSCEEEEEEEETT-----------EEEEEE-TT-EEEEEET
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEEECCCcceEEEEeCCC-----------eEEEEE-CC-CEEEEEC
Confidence 35688999985544 55567889999999887762 223456678899999 776665 33 4899998
Q ss_pred CCCC
Q 036317 91 RSGK 94 (106)
Q Consensus 91 ~~~~ 94 (106)
++++
T Consensus 117 ~~g~ 120 (326)
T 2ghs_A 117 ATGV 120 (326)
T ss_dssp TTCC
T ss_pred CCCc
Confidence 8776
No 220
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=97.17 E-value=0.006 Score=41.60 Aligned_cols=80 Identities=16% Similarity=0.131 Sum_probs=54.3
Q ss_pred CCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCcee----c----cCCCcEEEEEecCCcceeeeeeecccEEEE----ec
Q 036317 13 SDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTLP----V----SHNSTLEASFSQHLSLVALSVLILRSWVLE----GS 80 (106)
Q Consensus 13 ~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~~----~----~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t----~s 80 (106)
..++.++++++|+.+++...++.|.++|.. ++.. . ....+..+.++++| +..+| |.
T Consensus 86 ~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG-----------~l~~td~~~g~ 153 (305)
T 3dr2_A 86 AFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDG-----------AIWFTDPPFGL 153 (305)
T ss_dssp SCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTS-----------CEEEECCSGGG
T ss_pred CccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCC-----------CEEEeCcCCCc
Confidence 468899999999966665566889999975 5541 1 12234568999999 76665 32
Q ss_pred C-------------CCcEEEEECCCCC--------CCcEEEeCCC
Q 036317 81 G-------------DGSVYAWSARSGK--------EPPVIKWAPG 104 (106)
Q Consensus 81 ~-------------d~~i~~wd~~~~~--------~v~~i~~sp~ 104 (106)
. .+.|+.+|.++++ .++.++|+|+
T Consensus 154 ~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~p~gl~~spd 198 (305)
T 3dr2_A 154 RKPSQGCPADPELAHHSVYRLPPDGSPLQRMADLDHPNGLAFSPD 198 (305)
T ss_dssp SCGGGSCCCCCSSSCEEEEEECSSSCCCEEEEEESSEEEEEECTT
T ss_pred cccccccccccccCCCeEEEEcCCCCcEEEEecCCCCcceEEcCC
Confidence 1 2467777776665 2456777775
No 221
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.16 E-value=0.0012 Score=51.08 Aligned_cols=70 Identities=13% Similarity=0.037 Sum_probs=45.1
Q ss_pred CeeEEEEC-CCCCeEEEEeCC-----CeEEEEEcCCC-ce-ecc-CCCcEEEEEecCCcceeeeeeecccEEEEecCC--
Q 036317 14 DANEVKLS-NDGRLMLLTTLE-----GHIHVLHSFQG-TL-PVS-HNSTLEASFSQHLSLVALSVLILRSWVLEGSGD-- 82 (106)
Q Consensus 14 ~v~~v~~s-pdg~~l~~~~~~-----~~i~l~d~~~~-~~-~~~-~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d-- 82 (106)
.+...+|| |||++++.+... .+++++|+.++ +. ... ......+.|+||| +.|+..+.+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~~~~~~~WspDg-----------~~l~y~~~d~~ 243 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSGTNGEIVWGPDH-----------TSLFYVTKDET 243 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEEECSCCEECSST-----------TEEEEEEECTT
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccCceeeEEEecCC-----------CEEEEEEECCC
Confidence 57789999 999988865432 25999999988 64 110 1112347899999 444444332
Q ss_pred ---CcEEEEECCCCC
Q 036317 83 ---GSVYAWSARSGK 94 (106)
Q Consensus 83 ---~~i~~wd~~~~~ 94 (106)
..|+.+++.+++
T Consensus 244 ~~~~~v~~~~lgt~~ 258 (751)
T 2xe4_A 244 LRENKVWRHVMGKLQ 258 (751)
T ss_dssp CCEEEEEEEETTSCG
T ss_pred CCCCEEEEEECCCCc
Confidence 256777776553
No 222
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.11 E-value=0.00035 Score=50.32 Aligned_cols=65 Identities=8% Similarity=-0.122 Sum_probs=47.3
Q ss_pred EEEECCCCCeEEEEe----------CCCeEEEEEcCCCce----ecc--C-----CCcEEEEEecCCcceeeeeeecccE
Q 036317 17 EVKLSNDGRLMLLTT----------LEGHIHVLHSFQGTL----PVS--H-----NSTLEASFSQHLSLVALSVLILRSW 75 (106)
Q Consensus 17 ~v~~spdg~~l~~~~----------~~~~i~l~d~~~~~~----~~~--~-----~~~~~~~fs~d~~~~~~~~~~~~~~ 75 (106)
.+.+||||+++.++. .++.+.++|..+++. +.. . ..+..+.|+||| ++
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDG-----------k~ 137 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASS-----------AC 137 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTS-----------SC
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCC-----------CE
Confidence 799999999998886 368899999999987 111 0 234468999999 66
Q ss_pred EEEecC--CCcEEE--EECCC
Q 036317 76 VLEGSG--DGSVYA--WSARS 92 (106)
Q Consensus 76 i~t~s~--d~~i~~--wd~~~ 92 (106)
++.+.. +..+.+ +|+++
T Consensus 138 lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 138 LLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp EEEEECSSSCEEEEEETTTEE
T ss_pred EEEEccCCCCeEEEEEEchhh
Confidence 665543 345666 77654
No 223
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.03 E-value=0.0036 Score=45.10 Aligned_cols=69 Identities=9% Similarity=0.133 Sum_probs=52.2
Q ss_pred CCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce---eccCCCcEEEEEecCCcceeeeeeecccEEEEecCCC--cEEE
Q 036317 13 SDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL---PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDG--SVYA 87 (106)
Q Consensus 13 ~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~---~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~--~i~~ 87 (106)
.....++|+|+|+.+++...++.|+.||..++++ ........ ++|++++ +.++.++.++ .|++
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g-----------~~l~~~d~~~~~~I~~ 198 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDK-----------QRVYSIGWEGTHTVYV 198 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB-CEECTTS-----------SEEEEEBSSTTCEEEE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc-eeEecCC-----------CcEEEEecCCCceEEE
Confidence 3678999999999777777789999999988877 11222233 8899999 8888877755 7888
Q ss_pred EECCCC
Q 036317 88 WSARSG 93 (106)
Q Consensus 88 wd~~~~ 93 (106)
++...+
T Consensus 199 ~d~~~~ 204 (409)
T 3hrp_A 199 YMKASG 204 (409)
T ss_dssp EEGGGT
T ss_pred EEcCCC
Confidence 876543
No 224
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=96.99 E-value=0.0078 Score=41.87 Aligned_cols=72 Identities=8% Similarity=0.082 Sum_probs=50.8
Q ss_pred CCeeEEEECCCCCeEEEEeC-----CCeEEEEEcCCCce----ec------cCCCcEEEEEecCCcceeeeeeecccEEE
Q 036317 13 SDANEVKLSNDGRLMLLTTL-----EGHIHVLHSFQGTL----PV------SHNSTLEASFSQHLSLVALSVLILRSWVL 77 (106)
Q Consensus 13 ~~v~~v~~spdg~~l~~~~~-----~~~i~l~d~~~~~~----~~------~~~~~~~~~fs~d~~~~~~~~~~~~~~i~ 77 (106)
..+..++++++|+.+++-.. ++.+.+||..++++ .. ....+..+++++++ ....+
T Consensus 67 ~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~----------g~~yv 136 (343)
T 2qe8_A 67 DTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIH----------NFVYI 136 (343)
T ss_dssp SCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTT----------TEEEE
T ss_pred eEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCC----------CEEEE
Confidence 47899999999986665443 57899999998885 11 11234678999865 03335
Q ss_pred Eec---CCCcEEEEECCCCC
Q 036317 78 EGS---GDGSVYAWSARSGK 94 (106)
Q Consensus 78 t~s---~d~~i~~wd~~~~~ 94 (106)
+-. .++.|.+||+++++
T Consensus 137 td~~~~~~~~i~v~d~~~g~ 156 (343)
T 2qe8_A 137 SDPAPDDKAALIRVDLQTGL 156 (343)
T ss_dssp EECCSGGGCEEEEEETTTCC
T ss_pred EcCccCCCCeEEEEECCCCC
Confidence 544 57799999998765
No 225
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.98 E-value=0.0016 Score=50.06 Aligned_cols=55 Identities=15% Similarity=0.190 Sum_probs=40.8
Q ss_pred CeEEEEEcCCCce--e-ccCCCcEEEEEecCCcceeeeeeecccEEEEecCCCcEEEEECCCCCCCcEE
Q 036317 34 GHIHVLHSFQGTL--P-VSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSVYAWSARSGKEPPVI 99 (106)
Q Consensus 34 ~~i~l~d~~~~~~--~-~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~~wd~~~~~~v~~i 99 (106)
+.+..||..+++. . ..........++.++ ..++.++.|+.+++||+++|+.+..+
T Consensus 457 g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g-----------~~v~~g~~dg~l~a~D~~tG~~lw~~ 514 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAG-----------NVVFQGTADGRLVAYHAATGEKLWEA 514 (677)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCCCEEEETT-----------TEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred cEEEEEeCCCCcEEeecCCCCCCcCcceEeCC-----------CEEEEECCCCcEEEEECCCCceeeee
Confidence 6799999999987 2 122223344567777 78888999999999999999954444
No 226
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=96.79 E-value=0.01 Score=44.15 Aligned_cols=68 Identities=12% Similarity=0.128 Sum_probs=49.5
Q ss_pred eeEEEECCCCCeEEEEeCC------CeEEEEEcCCCce----e-c--cCCCcEEEEEecCCcceeeeeeecccEEEEec-
Q 036317 15 ANEVKLSNDGRLMLLTTLE------GHIHVLHSFQGTL----P-V--SHNSTLEASFSQHLSLVALSVLILRSWVLEGS- 80 (106)
Q Consensus 15 v~~v~~spdg~~l~~~~~~------~~i~l~d~~~~~~----~-~--~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s- 80 (106)
-..+..+||| .++++..+ +.+.++|..++++ + . .......+-|+|++ +.+++..
T Consensus 140 Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~-----------~~mvsS~w 207 (462)
T 2ece_A 140 LHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPN-----------EVLVSSEW 207 (462)
T ss_dssp EEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTT-----------TEEEECBC
T ss_pred ccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCC-----------CEEEEccC
Confidence 3456788999 56655554 7899999999987 1 1 11223458889999 8777774
Q ss_pred ------------------CCCcEEEEECCCCC
Q 036317 81 ------------------GDGSVYAWSARSGK 94 (106)
Q Consensus 81 ------------------~d~~i~~wd~~~~~ 94 (106)
.+.+|.+||+.+++
T Consensus 208 g~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k 239 (462)
T 2ece_A 208 AVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRK 239 (462)
T ss_dssp CCHHHHTTCCCTTTHHHHSCCEEEEEETTTTE
T ss_pred cCccccccccchhhhhhccCCEEEEEECCCCc
Confidence 46799999999876
No 227
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=96.78 E-value=0.0036 Score=47.88 Aligned_cols=68 Identities=13% Similarity=0.135 Sum_probs=52.2
Q ss_pred CeeEEEECCCCCeEEEEe-CCCeEEEEEcCCCc------e--------ecc-CCCcEEEEEecCCcceeeeeeecccEEE
Q 036317 14 DANEVKLSNDGRLMLLTT-LEGHIHVLHSFQGT------L--------PVS-HNSTLEASFSQHLSLVALSVLILRSWVL 77 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~~~-~~~~i~l~d~~~~~------~--------~~~-~~~~~~~~fs~d~~~~~~~~~~~~~~i~ 77 (106)
....+.+||||+++++++ .+.++.++|..+.+ + ... -..+....|+||| .-.+
T Consensus 278 ~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG-----------~aY~ 346 (595)
T 1fwx_A 278 NPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRG-----------NAYT 346 (595)
T ss_dssp SCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTS-----------EEEE
T ss_pred CceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCC-----------eEEE
Confidence 456899999999998776 67899999998652 1 111 1245678999999 7666
Q ss_pred EecCCCcEEEEECCC
Q 036317 78 EGSGDGSVYAWSARS 92 (106)
Q Consensus 78 t~s~d~~i~~wd~~~ 92 (106)
+.-.|++|.+||+++
T Consensus 347 t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 347 SLFLDSQVVKWNIED 361 (595)
T ss_dssp EETTTTEEEEEEHHH
T ss_pred EEecCCcEEEEEhhH
Confidence 777789999999987
No 228
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=96.75 E-value=0.032 Score=38.45 Aligned_cols=77 Identities=6% Similarity=-0.027 Sum_probs=49.5
Q ss_pred CeeEEEECCCCCeEEEEeC--CCeEEEEEcCCCcee----c-cCCCcEEEEEecCCcceeeeeeecccEEEEecCCCcEE
Q 036317 14 DANEVKLSNDGRLMLLTTL--EGHIHVLHSFQGTLP----V-SHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSVY 86 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~~~~--~~~i~l~d~~~~~~~----~-~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~ 86 (106)
....++|+|||..+++++. ++.++++|..++++. . .......+++..+ +..++.-.++.+.
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~------------~lyv~t~~~~~v~ 89 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNE------------KLYQVVWLKNIGF 89 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETT------------EEEEEETTCSEEE
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCC------------EEEEEEecCCEEE
Confidence 4689999999865555553 689999999999881 1 1112233444422 2233344677899
Q ss_pred EEECCCCCCCcEEEeC
Q 036317 87 AWSARSGKEPPVIKWA 102 (106)
Q Consensus 87 ~wd~~~~~~v~~i~~s 102 (106)
++|.++.+.+..+.+.
T Consensus 90 viD~~t~~v~~~i~~g 105 (266)
T 2iwa_A 90 IYDRRTLSNIKNFTHQ 105 (266)
T ss_dssp EEETTTTEEEEEEECC
T ss_pred EEECCCCcEEEEEECC
Confidence 9999888755555443
No 229
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=96.74 E-value=0.0033 Score=48.36 Aligned_cols=52 Identities=23% Similarity=0.291 Sum_probs=39.0
Q ss_pred CeEEEEEcCCCce--e-ccCCCcEEEEEecCCcceeeeeeecccEEEEecCCCcEEEEECCCCCCC
Q 036317 34 GHIHVLHSFQGTL--P-VSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSVYAWSARSGKEP 96 (106)
Q Consensus 34 ~~i~l~d~~~~~~--~-~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~~wd~~~~~~v 96 (106)
+.+..||+.+|+. . ..........++..+ ..|+.|+.|+.++.||.++|+.+
T Consensus 455 g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tag-----------glvf~gt~dg~l~a~D~~tG~~l 509 (689)
T 1yiq_A 455 GKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAG-----------NLVFEGSADGRVIAYAADTGEKL 509 (689)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCCCEEEETT-----------TEEEEECTTSEEEEEETTTCCEE
T ss_pred eeEEEEECCCCCeEeEccCCCCccCccceECC-----------CEEEEECCCCcEEEEECCCCccc
Confidence 7799999999987 1 122222334566677 78888999999999999999933
No 230
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=96.69 E-value=0.017 Score=41.62 Aligned_cols=67 Identities=9% Similarity=0.205 Sum_probs=53.0
Q ss_pred CeeEEEECCCCCeEEEEe-CCCeEEEEEcCCCce---ecc---------------CCCcEEEEEecCCcceeeeeeeccc
Q 036317 14 DANEVKLSNDGRLMLLTT-LEGHIHVLHSFQGTL---PVS---------------HNSTLEASFSQHLSLVALSVLILRS 74 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~~~-~~~~i~l~d~~~~~~---~~~---------------~~~~~~~~fs~d~~~~~~~~~~~~~ 74 (106)
....++++|+|+.+++-. .++.|+.||..++++ ... ...+..+++++++ .
T Consensus 324 ~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g-----------~ 392 (409)
T 3hrp_A 324 QPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEG-----------G 392 (409)
T ss_dssp SEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSS-----------E
T ss_pred CCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCC-----------C
Confidence 478999999999777777 789999999777776 111 2346779999999 8
Q ss_pred EEEEecCCCcEEEEECC
Q 036317 75 WVLEGSGDGSVYAWSAR 91 (106)
Q Consensus 75 ~i~t~s~d~~i~~wd~~ 91 (106)
.+++-..++.|+.++++
T Consensus 393 lyVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 393 YWIAEAWGKAIRKYAVE 409 (409)
T ss_dssp EEEEESTTCEEEEEEEC
T ss_pred EEEEECCCCeEEEEEeC
Confidence 88888888899888764
No 231
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=96.52 E-value=0.012 Score=44.83 Aligned_cols=67 Identities=6% Similarity=0.080 Sum_probs=47.2
Q ss_pred eEEEECCCCCeEEEEeCCC-------------eEEEEEcCCCce--------ec-cCCCcEEEEEecCCcceeeeeeecc
Q 036317 16 NEVKLSNDGRLMLLTTLEG-------------HIHVLHSFQGTL--------PV-SHNSTLEASFSQHLSLVALSVLILR 73 (106)
Q Consensus 16 ~~v~~spdg~~l~~~~~~~-------------~i~l~d~~~~~~--------~~-~~~~~~~~~fs~d~~~~~~~~~~~~ 73 (106)
..++|+ ||+.++.+..+. .|++|++.++.. .. +......+.|||||
T Consensus 178 ~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg----------- 245 (693)
T 3iuj_A 178 SGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDD----------- 245 (693)
T ss_dssp CCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTS-----------
T ss_pred ccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCC-----------
Confidence 577899 999999888774 489999876642 11 22345678999999
Q ss_pred cEEEEec----CCCcEEEEECCCCC
Q 036317 74 SWVLEGS----GDGSVYAWSARSGK 94 (106)
Q Consensus 74 ~~i~t~s----~d~~i~~wd~~~~~ 94 (106)
++|+..+ .+..|+++|+.++.
T Consensus 246 ~~l~~~~~~~~~~~~i~~~d~~~~~ 270 (693)
T 3iuj_A 246 RFLLISAANSTSGNRLYVKDLSQEN 270 (693)
T ss_dssp CEEEEEEESSSSCCEEEEEETTSTT
T ss_pred CEEEEEEccCCCCcEEEEEECCCCC
Confidence 6553322 23589999998764
No 232
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=96.19 E-value=0.021 Score=44.19 Aligned_cols=70 Identities=9% Similarity=-0.036 Sum_probs=45.2
Q ss_pred eEEEECCCCCeEEEEeCC-----CeEEEEEcCCCce------e-ccCCCcEEEEEecCCcceeeeeeecccEEEEecCCC
Q 036317 16 NEVKLSNDGRLMLLTTLE-----GHIHVLHSFQGTL------P-VSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDG 83 (106)
Q Consensus 16 ~~v~~spdg~~l~~~~~~-----~~i~l~d~~~~~~------~-~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~ 83 (106)
..+.|+|||+.++.+..+ .+|+++++.++.. . ........+.|||||++|++.... ....
T Consensus 224 ~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~--------~~~~ 295 (751)
T 2xe4_A 224 GEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQS--------PETA 295 (751)
T ss_dssp SCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEEC--------SSCE
T ss_pred eeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecC--------CCCc
Confidence 468899999988877654 3678888876642 1 122344678999999444433211 1234
Q ss_pred cEEEEECCCC
Q 036317 84 SVYAWSARSG 93 (106)
Q Consensus 84 ~i~~wd~~~~ 93 (106)
.|+++|+.++
T Consensus 296 ~l~~~d~~~~ 305 (751)
T 2xe4_A 296 EVHLLDLRKG 305 (751)
T ss_dssp EEEEEESSSC
T ss_pred eEEEEECCCC
Confidence 7888888775
No 233
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=96.19 E-value=0.00082 Score=47.72 Aligned_cols=65 Identities=11% Similarity=0.109 Sum_probs=35.2
Q ss_pred CCCeEEEEeCCCeEEEEEcCCCcee--ccCCCcEEEEEecCCcceeeeeeecccEEEEecCCCcEEEEECCCCCCCcEEE
Q 036317 23 DGRLMLLTTLEGHIHVLHSFQGTLP--VSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSVYAWSARSGKEPPVIK 100 (106)
Q Consensus 23 dg~~l~~~~~~~~i~l~d~~~~~~~--~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~~wd~~~~~~v~~i~ 100 (106)
++..+++++.++.++.||..+|+.. ..... ...++|++ ..|+.++.|+.++.||.++|+.+....
T Consensus 91 ~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~--~~~~~p~~-----------~~v~~~~~dg~v~a~d~~tG~~~W~~~ 157 (369)
T 2hz6_A 91 SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF--ADSLSPST-----------SLLYLGRTEYTITMYDTKTRELRWNAT 157 (369)
T ss_dssp ----CCCCEEEEEEEEECCC-----------------------------------EEEEEEEEEEECCCSSSSSCCCEEE
T ss_pred cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC--cccccccC-----------CEEEEEecCCEEEEEECCCCCEEEeEe
Confidence 3445677788899999999999871 11111 23456788 888999999999999999998555543
No 234
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=96.13 E-value=0.038 Score=38.07 Aligned_cols=65 Identities=14% Similarity=0.036 Sum_probs=48.5
Q ss_pred EEECCCCCeEEEEeCCCeEEEEEcCCCce----ec-c----CCCcEEEEEecCCcceeeeeeecccEEEEecCCCcEEEE
Q 036317 18 VKLSNDGRLMLLTTLEGHIHVLHSFQGTL----PV-S----HNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSVYAW 88 (106)
Q Consensus 18 v~~spdg~~l~~~~~~~~i~l~d~~~~~~----~~-~----~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~~w 88 (106)
..+++||+.++++..++.++++|..+.+. .. . ...+..+.|. ++ +..+....++.|.+.
T Consensus 110 ~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg-----------~lyvn~~~~~~V~vI 177 (266)
T 2iwa_A 110 WGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NG-----------EVWANIWQTDCIARI 177 (266)
T ss_dssp CEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT-----------EEEEEETTSSEEEEE
T ss_pred EEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CC-----------EEEEecCCCCeEEEE
Confidence 45778898888888889999999998876 11 1 1124456777 77 655666567899999
Q ss_pred ECCCCC
Q 036317 89 SARSGK 94 (106)
Q Consensus 89 d~~~~~ 94 (106)
|.++++
T Consensus 178 D~~tg~ 183 (266)
T 2iwa_A 178 SAKDGT 183 (266)
T ss_dssp ETTTCC
T ss_pred ECCCCc
Confidence 999998
No 235
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=96.12 E-value=0.069 Score=36.41 Aligned_cols=71 Identities=13% Similarity=0.120 Sum_probs=46.8
Q ss_pred CCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce--eccCCCcEEEEEecCCcceeeeeeecccEEEEecCC--CcEEEE
Q 036317 13 SDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL--PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGD--GSVYAW 88 (106)
Q Consensus 13 ~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~--~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d--~~i~~w 88 (106)
.....++++++|+.+++-..++.|+.+|...... ......+..++++++| +.+++.... ..|..+
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~~~~~~~~~p~gia~~~dG-----------~l~vad~~~~~~~v~~~ 100 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQIHATVEGKVSGLAFTSNG-----------DLVATGWNADSIPVVSL 100 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEEECSSEEEEEEECTTS-----------CEEEEEECTTSCEEEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCceEEEEeCCCCceeEEEcCCC-----------cEEEEeccCCcceEEEE
Confidence 4678999999999666666889999999765433 1122345678999999 644444322 235556
Q ss_pred ECCCCC
Q 036317 89 SARSGK 94 (106)
Q Consensus 89 d~~~~~ 94 (106)
|..+|+
T Consensus 101 d~~~g~ 106 (306)
T 2p4o_A 101 VKSDGT 106 (306)
T ss_dssp ECTTSC
T ss_pred cCCCCe
Confidence 655554
No 236
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=95.90 E-value=0.072 Score=40.97 Aligned_cols=77 Identities=12% Similarity=0.176 Sum_probs=54.3
Q ss_pred eEEEECCCCCeEEEEeCCCe-------------------EEEEEcCCCce----ec-cC--------CCcEEEEEecCCc
Q 036317 16 NEVKLSNDGRLMLLTTLEGH-------------------IHVLHSFQGTL----PV-SH--------NSTLEASFSQHLS 63 (106)
Q Consensus 16 ~~v~~spdg~~l~~~~~~~~-------------------i~l~d~~~~~~----~~-~~--------~~~~~~~fs~d~~ 63 (106)
..+.++|++..+++++.++. +..+|..+|+. +. ++ ..........+|
T Consensus 238 ~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G- 316 (689)
T 1yiq_A 238 DSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDG- 316 (689)
T ss_dssp SCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETT-
T ss_pred cceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCC-
Confidence 46889999888888877753 89999999987 11 11 111222223355
Q ss_pred ceeeeeeeccc---EEEEecCCCcEEEEECCCCCCCcEEEeCC
Q 036317 64 LVALSVLILRS---WVLEGSGDGSVYAWSARSGKEPPVIKWAP 103 (106)
Q Consensus 64 ~~~~~~~~~~~---~i~t~s~d~~i~~wd~~~~~~v~~i~~sp 103 (106)
+ .++.++.+|.++++|.++|+.+....+.|
T Consensus 317 ----------~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~ 349 (689)
T 1yiq_A 317 ----------KPRKVLMQAPKNGFFYVIDRATGELLSAKGIVP 349 (689)
T ss_dssp ----------EEEEEEEECCTTSEEEEEETTTCCEEEEEESSC
T ss_pred ----------cEEEEEEEECCCCeEEEEECCCCCEeccccccc
Confidence 4 78899999999999999999665554443
No 237
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=95.84 E-value=0.24 Score=36.70 Aligned_cols=82 Identities=16% Similarity=0.153 Sum_probs=57.3
Q ss_pred ceeeecCC--CCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce----------------e-c-----cCCCcEEEEE
Q 036317 3 FDIFSDGG--DVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL----------------P-V-----SHNSTLEASF 58 (106)
Q Consensus 3 ~~~~~~~~--~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~----------------~-~-----~~~~~~~~~f 58 (106)
|...++.. ..++|..+..||+|++++..+ +++++|..+-.+.. . . ....+..+.|
T Consensus 54 Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlW 132 (452)
T 3pbp_A 54 YHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLF 132 (452)
T ss_dssp CEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEE
T ss_pred ceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEe
Confidence 44455542 345788999999999777764 67899988763321 0 0 1345778999
Q ss_pred ecCCcceeeeeeecccEEEEecCCCcEEEEECCCC
Q 036317 59 SQHLSLVALSVLILRSWVLEGSGDGSVYAWSARSG 93 (106)
Q Consensus 59 s~d~~~~~~~~~~~~~~i~t~s~d~~i~~wd~~~~ 93 (106)
+|-+ -....|+.--+|+.|++||+...
T Consensus 133 HPl~--------~~ds~LVVLtsD~~Ir~yDl~~s 159 (452)
T 3pbp_A 133 HPKS--------YRDSCIVVLKEDDTITMFDILNS 159 (452)
T ss_dssp CTTB--------GGGCEEEEEETTSCEEEEETTCT
T ss_pred cccc--------CCCCeEEEEecCCEEEEEEcccC
Confidence 9986 11247888888999999999963
No 238
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=95.78 E-value=0.1 Score=35.94 Aligned_cols=75 Identities=15% Similarity=0.119 Sum_probs=47.1
Q ss_pred CeeEEEECCCCCeEEEEeCCC--eEEEEEcCCCce----eccCCC-cEEEEEecCCcceeeeeeecccEEEEecCCCcEE
Q 036317 14 DANEVKLSNDGRLMLLTTLEG--HIHVLHSFQGTL----PVSHNS-TLEASFSQHLSLVALSVLILRSWVLEGSGDGSVY 86 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~~~~~~--~i~l~d~~~~~~----~~~~~~-~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~ 86 (106)
-...+.|+ ++..+.+++.++ .++.+|..++++ ...... ...++...+. -|+++ -.++.+.
T Consensus 44 ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~-----------ly~lt-w~~~~v~ 110 (262)
T 3nol_A 44 FTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDK-----------IVGLT-WKNGLGF 110 (262)
T ss_dssp EEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTE-----------EEEEE-SSSSEEE
T ss_pred ccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCE-----------EEEEE-eeCCEEE
Confidence 45789998 677667777765 899999999998 111111 1234443332 33333 3566888
Q ss_pred EEECCCCCCCcEEEe
Q 036317 87 AWSARSGKEPPVIKW 101 (106)
Q Consensus 87 ~wd~~~~~~v~~i~~ 101 (106)
++|.++.+.+..+.+
T Consensus 111 v~D~~t~~~~~ti~~ 125 (262)
T 3nol_A 111 VWNIRNLRQVRSFNY 125 (262)
T ss_dssp EEETTTCCEEEEEEC
T ss_pred EEECccCcEEEEEEC
Confidence 888888775555544
No 239
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=95.63 E-value=0.056 Score=36.96 Aligned_cols=44 Identities=5% Similarity=0.045 Sum_probs=32.7
Q ss_pred ceeeecCCCCCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce
Q 036317 3 FDIFSDGGDVSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL 46 (106)
Q Consensus 3 ~~~~~~~~~~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~ 46 (106)
+..+.+.+.-.....++++++|+.+.+...++.|..||..+++.
T Consensus 9 ~~~i~~~g~~~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~ 52 (322)
T 2fp8_A 9 LKEILIEAPSYAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGF 52 (322)
T ss_dssp -CEEEEECSSSCCCCEECCTTCSSEEEECTTSEEEEECCTTTCE
T ss_pred cceeecCCccCCceEEEEcCCCCEEEEEcCCCeEEEECCCCCce
Confidence 34455554444677899999999788888889999999877654
No 240
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=95.59 E-value=0.056 Score=41.36 Aligned_cols=77 Identities=17% Similarity=0.208 Sum_probs=54.3
Q ss_pred eeEEEECCCCCeEEEEeCCC-------------------eEEEEEcCCCce----ec-cC--------CCcEEEEEecCC
Q 036317 15 ANEVKLSNDGRLMLLTTLEG-------------------HIHVLHSFQGTL----PV-SH--------NSTLEASFSQHL 62 (106)
Q Consensus 15 v~~v~~spdg~~l~~~~~~~-------------------~i~l~d~~~~~~----~~-~~--------~~~~~~~fs~d~ 62 (106)
...++++|++..+..++.++ .+.-+|..+|+. +. ++ .......+..+|
T Consensus 232 w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G 311 (668)
T 1kv9_A 232 WDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDG 311 (668)
T ss_dssp CSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETT
T ss_pred ccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCC
Confidence 34678999888888887665 388999999987 11 11 122223334566
Q ss_pred cceeeeeeeccc---EEEEecCCCcEEEEECCCCCCCcEEEeC
Q 036317 63 SLVALSVLILRS---WVLEGSGDGSVYAWSARSGKEPPVIKWA 102 (106)
Q Consensus 63 ~~~~~~~~~~~~---~i~t~s~d~~i~~wd~~~~~~v~~i~~s 102 (106)
+ .|+.++.+|.++++|.++|+.+..+.+.
T Consensus 312 -----------~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~ 343 (668)
T 1kv9_A 312 -----------KPRKVLMQAPKNGFFYVLDRTNGKLISAEKFG 343 (668)
T ss_dssp -----------EEEEEEEECCTTSEEEEEETTTCCEEEEEESS
T ss_pred -----------cEEEEEEEECCCCEEEEEECCCCCEecccccc
Confidence 5 6889999999999999999966544443
No 241
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=95.56 E-value=0.027 Score=42.40 Aligned_cols=54 Identities=19% Similarity=0.164 Sum_probs=35.5
Q ss_pred CCeEEEEEcCCCce--ec-cCCCcEEEEEecCCcceeeeeeecccEEEEecCCCcEEEEECCCCCCCc
Q 036317 33 EGHIHVLHSFQGTL--PV-SHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSVYAWSARSGKEPP 97 (106)
Q Consensus 33 ~~~i~l~d~~~~~~--~~-~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~~wd~~~~~~v~ 97 (106)
++.+..+|..+++. .. .........+...+ ..|..++.|+.++.+|.++|+.+.
T Consensus 443 ~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~g-----------g~v~~g~~dg~l~a~D~~tG~~lw 499 (571)
T 2ad6_A 443 MGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKG-----------GLVWYATLDGYLKALDNKDGKELW 499 (571)
T ss_dssp CEEEEEECTTTCCEEEEEEESSCCCSBCEEETT-----------TEEEEECTTSEEEEEETTTCCEEE
T ss_pred CCeEEEEECCCCCEEEEecCCCCccceeEEECC-----------CEEEEEcCCCeEEEEECCCCCEEE
Confidence 47888999988887 11 11111112223344 566778899999999999999443
No 242
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=95.49 E-value=0.25 Score=32.63 Aligned_cols=80 Identities=11% Similarity=-0.083 Sum_probs=50.3
Q ss_pred CeeEEEECCCCCeEEEE-eCCCeEEEEEcCCCce---eccCCCcEEEEEecCCcceeeeeeecccEEEEecCCCcEEEEE
Q 036317 14 DANEVKLSNDGRLMLLT-TLEGHIHVLHSFQGTL---PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSVYAWS 89 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~~-~~~~~i~l~d~~~~~~---~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~~wd 89 (106)
..+.++++|+++++..+ ...+.|..+|...... ......+..++.. ++ ...++...++.|..+|
T Consensus 168 ~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~P~gi~~d-~~-----------~lyva~~~~~~v~~~d 235 (267)
T 1npe_A 168 LPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVTSY-GK-----------NLYYTDWKTNSVIAMD 235 (267)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCCSEEEEEEE-TT-----------EEEEEETTTTEEEEEE
T ss_pred CCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCCCCceEEEEe-CC-----------EEEEEECCCCeEEEEe
Confidence 56789999987766554 4668899999865433 1111233444443 23 3444444567999999
Q ss_pred CCCCC-----------CCcEEEeCCCC
Q 036317 90 ARSGK-----------EPPVIKWAPGS 105 (106)
Q Consensus 90 ~~~~~-----------~v~~i~~sp~~ 105 (106)
.++|+ .+..+.+.|+.
T Consensus 236 ~~~g~~~~~i~~g~~~~p~gi~~~~~~ 262 (267)
T 1npe_A 236 LAISKEMDTFHPHKQTRLYGITIALSQ 262 (267)
T ss_dssp TTTTEEEEEECCSSCCCCCCEEEECSC
T ss_pred CCCCCceEEEccccccccceeeecCcc
Confidence 98887 24566666653
No 243
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=95.44 E-value=0.11 Score=39.81 Aligned_cols=81 Identities=16% Similarity=0.192 Sum_probs=55.8
Q ss_pred eeEEEECCCCCeEEEEeCCC-------------------eEEEEEcCCCce----ec-cC--------CCcEEEEEecCC
Q 036317 15 ANEVKLSNDGRLMLLTTLEG-------------------HIHVLHSFQGTL----PV-SH--------NSTLEASFSQHL 62 (106)
Q Consensus 15 v~~v~~spdg~~l~~~~~~~-------------------~i~l~d~~~~~~----~~-~~--------~~~~~~~fs~d~ 62 (106)
...++++|++..+++++.++ .+..+|..+|+. +. .+ ..+.-+....+|
T Consensus 245 w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG 324 (677)
T 1kb0_A 245 WDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAG 324 (677)
T ss_dssp CSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETT
T ss_pred ccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCC
Confidence 35688999998888877654 489999999987 11 11 122223344466
Q ss_pred cceeeeeeecccEEEEecCCCcEEEEECCCCCCCcEEEeCC
Q 036317 63 SLVALSVLILRSWVLEGSGDGSVYAWSARSGKEPPVIKWAP 103 (106)
Q Consensus 63 ~~~~~~~~~~~~~i~t~s~d~~i~~wd~~~~~~v~~i~~sp 103 (106)
+ .++.++.++.+|.++++|.++|+.+..+.+.|
T Consensus 325 ~--------~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~ 357 (677)
T 1kb0_A 325 K--------PRKVILHAPKNGFFFVLDRTNGKFISAKNFVP 357 (677)
T ss_dssp E--------EEEEEEECCTTSEEEEEETTTCCEEEEEESSC
T ss_pred c--------EeeEEEEECCCCEEEEEECCCCCEeccccccc
Confidence 0 01368899999999999999999666665543
No 244
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=95.41 E-value=0.061 Score=37.27 Aligned_cols=64 Identities=9% Similarity=-0.102 Sum_probs=44.7
Q ss_pred EECCCCCeEEEEeCCCeEEEEEcCCCce----ec-----cCCCcEEEEEecCCcceeeeeeecccEEEEecCCCcEEEEE
Q 036317 19 KLSNDGRLMLLTTLEGHIHVLHSFQGTL----PV-----SHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSVYAWS 89 (106)
Q Consensus 19 ~~spdg~~l~~~~~~~~i~l~d~~~~~~----~~-----~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~~wd 89 (106)
.+++||+.+.++..+++++++|..+.+. .. ....+..+.|. +| +..+..-.+..|.+.|
T Consensus 140 GLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG-----------~lyanvw~s~~I~vID 207 (268)
T 3nok_A 140 GLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NG-----------VIYANIWHSSDVLEID 207 (268)
T ss_dssp CEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT-----------EEEEEETTCSEEEEEC
T ss_pred EEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CC-----------EEEEEECCCCeEEEEe
Confidence 3446788888887789999999998877 11 11233445666 77 6555555667899999
Q ss_pred CCCCC
Q 036317 90 ARSGK 94 (106)
Q Consensus 90 ~~~~~ 94 (106)
.++|+
T Consensus 208 p~TG~ 212 (268)
T 3nok_A 208 PATGT 212 (268)
T ss_dssp TTTCB
T ss_pred CCCCc
Confidence 99888
No 245
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=95.39 E-value=0.35 Score=32.95 Aligned_cols=73 Identities=14% Similarity=0.167 Sum_probs=51.6
Q ss_pred cCCCCCCeeEEEECCCCCeEE-EEeCCCeEEEEEcCCCce----e-ccCCCcEEEEEecCCcceeeeeeecccEEEEecC
Q 036317 8 DGGDVSDANEVKLSNDGRLML-LTTLEGHIHVLHSFQGTL----P-VSHNSTLEASFSQHLSLVALSVLILRSWVLEGSG 81 (106)
Q Consensus 8 ~~~~~~~v~~v~~spdg~~l~-~~~~~~~i~l~d~~~~~~----~-~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~ 81 (106)
+.+-.+.++.++++|+++.|. +...++.|..+|.. +++ + ........+++.+++ +++++.-.
T Consensus 22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g-----------~~~vs~E~ 89 (255)
T 3qqz_A 22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDN-----------QFVISDER 89 (255)
T ss_dssp CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTT-----------EEEEEETT
T ss_pred CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCC-----------EEEEEECC
Confidence 445556899999999876555 56677888888987 776 1 112345668888999 77776656
Q ss_pred CCcEEEEECCC
Q 036317 82 DGSVYAWSARS 92 (106)
Q Consensus 82 d~~i~~wd~~~ 92 (106)
++.+.++++..
T Consensus 90 ~~~l~~~~v~~ 100 (255)
T 3qqz_A 90 DYAIYVISLTP 100 (255)
T ss_dssp TTEEEEEEECT
T ss_pred CCcEEEEEcCC
Confidence 66777777654
No 246
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=95.36 E-value=0.1 Score=38.81 Aligned_cols=57 Identities=12% Similarity=0.068 Sum_probs=40.7
Q ss_pred CCeeEEEECCCCCeEEEEe-CCCeEEEEEcCC-Cce----eccCC----------------CcEEEEEecCCcceeeeee
Q 036317 13 SDANEVKLSNDGRLMLLTT-LEGHIHVLHSFQ-GTL----PVSHN----------------STLEASFSQHLSLVALSVL 70 (106)
Q Consensus 13 ~~v~~v~~spdg~~l~~~~-~~~~i~l~d~~~-~~~----~~~~~----------------~~~~~~fs~d~~~~~~~~~ 70 (106)
.....+.+||||++|.++. ..+.|.++|+.+ ++. ....+ .+..+.++|||
T Consensus 321 ~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDG-------- 392 (462)
T 2ece_A 321 PLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDG-------- 392 (462)
T ss_dssp CCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTS--------
T ss_pred CceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCC--------
Confidence 3578999999999998776 468999999853 222 11111 24568999999
Q ss_pred ecccEEEEec
Q 036317 71 ILRSWVLEGS 80 (106)
Q Consensus 71 ~~~~~i~t~s 80 (106)
++++.+.
T Consensus 393 ---k~LyVaN 399 (462)
T 2ece_A 393 ---RRVYVTN 399 (462)
T ss_dssp ---SEEEEEC
T ss_pred ---CEEEEEc
Confidence 7777666
No 247
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=95.17 E-value=0.086 Score=36.35 Aligned_cols=64 Identities=11% Similarity=0.074 Sum_probs=43.4
Q ss_pred EECCCCCeEEEEeCCCeEEEEEcCCCce----ec-c----CCCcEEEEEecCCcceeeeeeecccEEEEecCCCcEEEEE
Q 036317 19 KLSNDGRLMLLTTLEGHIHVLHSFQGTL----PV-S----HNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSVYAWS 89 (106)
Q Consensus 19 ~~spdg~~l~~~~~~~~i~l~d~~~~~~----~~-~----~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~~wd 89 (106)
.+++||+.+.++..+++++++|..+.+. .. . ...+..+.|. +| +..+..-.+..|.+.|
T Consensus 131 glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G-----------~lyan~w~~~~I~vID 198 (262)
T 3nol_A 131 GLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DG-----------EIFANVWQTNKIVRID 198 (262)
T ss_dssp CEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TT-----------EEEEEETTSSEEEEEC
T ss_pred EEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CC-----------EEEEEEccCCeEEEEE
Confidence 4456788787777788899999988876 11 1 1222345665 77 6555555667899999
Q ss_pred CCCCC
Q 036317 90 ARSGK 94 (106)
Q Consensus 90 ~~~~~ 94 (106)
.++|+
T Consensus 199 p~tG~ 203 (262)
T 3nol_A 199 PETGK 203 (262)
T ss_dssp TTTCB
T ss_pred CCCCc
Confidence 98888
No 248
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=95.14 E-value=0.11 Score=39.85 Aligned_cols=68 Identities=10% Similarity=0.185 Sum_probs=45.5
Q ss_pred CeeEEEECCCCCeEEEEeCCC--------------------------------------eEEEEEcCC--Cce-----ec
Q 036317 14 DANEVKLSNDGRLMLLTTLEG--------------------------------------HIHVLHSFQ--GTL-----PV 48 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~~~~~~--------------------------------------~i~l~d~~~--~~~-----~~ 48 (106)
.-..++++|||+++++++.+. .+.++|..+ ++. +.
T Consensus 196 ~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipv 275 (595)
T 1fwx_A 196 NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPI 275 (595)
T ss_dssp CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEE
T ss_pred CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEec
Confidence 346788999999999888553 355566555 222 11
Q ss_pred cCCCcEEEEEecCCcceeeeeeecccEEEEec-CCCcEEEEECCCC
Q 036317 49 SHNSTLEASFSQHLSLVALSVLILRSWVLEGS-GDGSVYAWSARSG 93 (106)
Q Consensus 49 ~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s-~d~~i~~wd~~~~ 93 (106)
. ..+-.+.++||| ++++.++ .+.+|.++|+.+.
T Consensus 276 g-~~PhGv~~sPDG-----------k~v~V~~~~s~~VsVid~~~~ 309 (595)
T 1fwx_A 276 A-NNPHGCNMAPDK-----------KHLCVAGKLSPTVTVLDVTRF 309 (595)
T ss_dssp E-SSCCCEEECTTS-----------SEEEEECTTSSBEEEEEGGGH
T ss_pred C-CCceEEEEcCCC-----------CEEEEeCCCCCeEEEEECccc
Confidence 1 123348999999 8766554 5679999999854
No 249
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=95.00 E-value=0.16 Score=35.25 Aligned_cols=61 Identities=21% Similarity=0.277 Sum_probs=38.5
Q ss_pred CCCeEEEEeCCCeEEEEEcCCCce--eccC----------CCcEEEEEecCCcceeeeeeecccEEEEecCCCcEEEEEC
Q 036317 23 DGRLMLLTTLEGHIHVLHSFQGTL--PVSH----------NSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSVYAWSA 90 (106)
Q Consensus 23 dg~~l~~~~~~~~i~l~d~~~~~~--~~~~----------~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~~wd~ 90 (106)
++..+.+++.++.+..+|..+|+. .... ..........++ ..|..++.++.++.+|.
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~v~v~~~~g~l~a~d~ 120 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSG-----------GHVYIGSEKAQVYALNT 120 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEET-----------TEEEEEETTSEEEEEET
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeC-----------CEEEEEcCCCEEEEEEC
Confidence 356688888889999999999987 1111 111222222233 45556666777777777
Q ss_pred CCCC
Q 036317 91 RSGK 94 (106)
Q Consensus 91 ~~~~ 94 (106)
++|+
T Consensus 121 ~tG~ 124 (376)
T 3q7m_A 121 SDGT 124 (376)
T ss_dssp TTCC
T ss_pred CCCC
Confidence 7776
No 250
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=94.98 E-value=0.27 Score=34.04 Aligned_cols=75 Identities=11% Similarity=0.136 Sum_probs=47.9
Q ss_pred CeeEEEECCCCCeEEEEeCCCeEEEEEcCCCceec--cCCCc--EEEEEecCCcceeeeeeecccEEEEecCCCcEEEEE
Q 036317 14 DANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTLPV--SHNST--LEASFSQHLSLVALSVLILRSWVLEGSGDGSVYAWS 89 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~~~--~~~~~--~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~~wd 89 (106)
-...+.|+ ++..+.+++.++.++.+|..++++.. -.... ..+++..+. -|++ .-.++.+.++|
T Consensus 56 ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~l~~~~FgeGit~~g~~-----------Ly~l-tw~~~~v~V~D 122 (268)
T 3nok_A 56 FTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWMERLGNIFAEGLASDGER-----------LYQL-TWTEGLLFTWS 122 (268)
T ss_dssp CEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEEECTTCCEEEEEECSSC-----------EEEE-ESSSCEEEEEE
T ss_pred ccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEECCCCcceeEEEEeCCE-----------EEEE-EccCCEEEEEE
Confidence 45788887 46666788888999999999998821 11111 234444333 3443 33566888888
Q ss_pred CCCCCCCcEEEe
Q 036317 90 ARSGKEPPVIKW 101 (106)
Q Consensus 90 ~~~~~~v~~i~~ 101 (106)
.++.+.+..+.+
T Consensus 123 ~~Tl~~~~ti~~ 134 (268)
T 3nok_A 123 GMPPQRERTTRY 134 (268)
T ss_dssp TTTTEEEEEEEC
T ss_pred CCcCcEEEEEeC
Confidence 888775555554
No 251
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=94.91 E-value=0.24 Score=33.78 Aligned_cols=68 Identities=12% Similarity=0.028 Sum_probs=46.6
Q ss_pred CeeEEEECC-CCCeEEEEeC-----------------CCeEEEEEcCCCcee---ccCCCcEEEEEecCCcceeeeeeec
Q 036317 14 DANEVKLSN-DGRLMLLTTL-----------------EGHIHVLHSFQGTLP---VSHNSTLEASFSQHLSLVALSVLIL 72 (106)
Q Consensus 14 ~v~~v~~sp-dg~~l~~~~~-----------------~~~i~l~d~~~~~~~---~~~~~~~~~~fs~d~~~~~~~~~~~ 72 (106)
..+.++++| +|+.+++... ++.+..+|..+++.. ........++++||+
T Consensus 127 ~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg---------- 196 (322)
T 2fp8_A 127 WLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELHVPGGAEVSADS---------- 196 (322)
T ss_dssp CEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEESCCCEEEECTTS----------
T ss_pred ccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccCCccCcceEECCCC----------
Confidence 568899999 9986665432 367888888777651 112234568999999
Q ss_pred ccEEEEe-cCCCcEEEEECCC
Q 036317 73 RSWVLEG-SGDGSVYAWSARS 92 (106)
Q Consensus 73 ~~~i~t~-s~d~~i~~wd~~~ 92 (106)
+++..+ ..++.|+++++..
T Consensus 197 -~~lyv~d~~~~~I~~~~~~~ 216 (322)
T 2fp8_A 197 -SFVLVAEFLSHQIVKYWLEG 216 (322)
T ss_dssp -SEEEEEEGGGTEEEEEESSS
T ss_pred -CEEEEEeCCCCeEEEEECCC
Confidence 755433 4567888888875
No 252
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=94.56 E-value=0.2 Score=34.13 Aligned_cols=65 Identities=14% Similarity=0.040 Sum_probs=43.3
Q ss_pred EEECCCCCeEEEEeCCCeEEEEEcCCCce----ec-----cCCCcEEEEEecCCcceeeeeeecccEEEEecCCCcEEEE
Q 036317 18 VKLSNDGRLMLLTTLEGHIHVLHSFQGTL----PV-----SHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSVYAW 88 (106)
Q Consensus 18 v~~spdg~~l~~~~~~~~i~l~d~~~~~~----~~-----~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~~w 88 (106)
..+++|++.+.++..+++++++|..+.+. .. ....+..+.+. +| +..+..-.+..|.+.
T Consensus 108 wglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G-----------~lyanvw~s~~I~vI 175 (243)
T 3mbr_X 108 WALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NG-----------ELLANVWLTSRIARI 175 (243)
T ss_dssp CEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT-----------EEEEEETTTTEEEEE
T ss_pred eEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CC-----------EEEEEECCCCeEEEE
Confidence 34557788788877889999999988876 11 11223345544 66 544454456688888
Q ss_pred ECCCCC
Q 036317 89 SARSGK 94 (106)
Q Consensus 89 d~~~~~ 94 (106)
|.++|+
T Consensus 176 Dp~tG~ 181 (243)
T 3mbr_X 176 DPASGK 181 (243)
T ss_dssp CTTTCB
T ss_pred ECCCCC
Confidence 888887
No 253
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=94.40 E-value=0.09 Score=39.72 Aligned_cols=52 Identities=27% Similarity=0.461 Sum_probs=34.4
Q ss_pred CCeEEEEEcCCCce--ec-cCCCcEEEEEecCCcceeeeeeecccEEEEecCCCcEEEEECCCCCC
Q 036317 33 EGHIHVLHSFQGTL--PV-SHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSVYAWSARSGKE 95 (106)
Q Consensus 33 ~~~i~l~d~~~~~~--~~-~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~~wd~~~~~~ 95 (106)
.+.+.-||..+|+. .. .............+ ..|..++.|+.++.+|.++|+.
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tag-----------glvf~g~~dg~l~A~D~~tG~~ 519 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAG-----------NLVFTGTGDGYFKAFDAKSGKE 519 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESSCCCSCCEEETT-----------TEEEEECTTSEEEEEETTTCCE
T ss_pred cceEEEEECCCCCEEEEecCCCCCcccceEeCC-----------CEEEEECCCCcEEEEECCCCCE
Confidence 57788899999887 11 11111111122234 5677789999999999999993
No 254
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=94.37 E-value=0.72 Score=31.33 Aligned_cols=33 Identities=12% Similarity=0.065 Sum_probs=25.7
Q ss_pred CCeeEEEECCCCCeEEEEeCC--CeEEEEEcCCCce
Q 036317 13 SDANEVKLSNDGRLMLLTTLE--GHIHVLHSFQGTL 46 (106)
Q Consensus 13 ~~v~~v~~spdg~~l~~~~~~--~~i~l~d~~~~~~ 46 (106)
.-...+.|++ +..+.+++.+ ..++.+|..++++
T Consensus 21 ~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv 55 (243)
T 3mbr_X 21 AFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRI 55 (243)
T ss_dssp CCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCE
T ss_pred cccccEEEEC-CEEEEECCCCCCceEEEEECCCCCE
Confidence 3677999987 5655666664 4899999999998
No 255
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=94.33 E-value=0.57 Score=33.83 Aligned_cols=80 Identities=11% Similarity=0.144 Sum_probs=49.7
Q ss_pred CCeeEEEECCCCCeEEEEeCC-----CeEEEEEcCCCce-----eccCCCcEEEEEec-CCcceeeeeeecccEEEEecC
Q 036317 13 SDANEVKLSNDGRLMLLTTLE-----GHIHVLHSFQGTL-----PVSHNSTLEASFSQ-HLSLVALSVLILRSWVLEGSG 81 (106)
Q Consensus 13 ~~v~~v~~spdg~~l~~~~~~-----~~i~l~d~~~~~~-----~~~~~~~~~~~fs~-d~~~~~~~~~~~~~~i~t~s~ 81 (106)
.....++|+++|++|+++... ..+.+++. ++.. ......+..++++| ++ ...++-..
T Consensus 179 ~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~~~~~~~l~~~~~p~giavdp~~g-----------~lyv~d~~ 246 (430)
T 3tc9_A 179 SKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESGFKVITELTKGQNCNGAETHPING-----------ELYFNSWN 246 (430)
T ss_dssp SCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGTSCSEEEEEECSSCCCEEECTTTC-----------CEEEEETT
T ss_pred CCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCceeeeeeeccCCCceEEEEeCCCC-----------EEEEEECC
Confidence 467899999999977666542 13444443 2222 11223345578899 66 65555556
Q ss_pred CCcEEEEECCCCC-----------CCcEEEeCCC
Q 036317 82 DGSVYAWSARSGK-----------EPPVIKWAPG 104 (106)
Q Consensus 82 d~~i~~wd~~~~~-----------~v~~i~~sp~ 104 (106)
++.|+.++..++. ..+.++|+|+
T Consensus 247 ~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pd 280 (430)
T 3tc9_A 247 AGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPS 280 (430)
T ss_dssp TTEEEEEETTTTEEEEEEECSSSSCCEEEEECTT
T ss_pred CCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCC
Confidence 6788888877543 3567888775
No 256
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=94.32 E-value=0.35 Score=34.94 Aligned_cols=67 Identities=7% Similarity=0.052 Sum_probs=46.7
Q ss_pred CeeEEEECC-CCCeEEEEeCCCeEEEEEcCCCce----e-ccCCCcEEEEEecCCcceeeeeeecccEE-EEecCCCcEE
Q 036317 14 DANEVKLSN-DGRLMLLTTLEGHIHVLHSFQGTL----P-VSHNSTLEASFSQHLSLVALSVLILRSWV-LEGSGDGSVY 86 (106)
Q Consensus 14 ~v~~v~~sp-dg~~l~~~~~~~~i~l~d~~~~~~----~-~~~~~~~~~~fs~d~~~~~~~~~~~~~~i-~t~s~d~~i~ 86 (106)
....++++| +|..+++-..++.|..+|..++.. . .....+..++|+|++ +++ ++-..++.|+
T Consensus 227 ~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG-----------~~lyv~d~~~~~I~ 295 (430)
T 3tc9_A 227 NCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSG-----------NYAYIVVVNQHYIL 295 (430)
T ss_dssp SCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTS-----------SEEEEEETTTTEEE
T ss_pred CceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCC-----------CEEEEEECCCCEEE
Confidence 456788999 677666666778999999877654 1 122346779999999 743 4444566888
Q ss_pred EEECC
Q 036317 87 AWSAR 91 (106)
Q Consensus 87 ~wd~~ 91 (106)
.++..
T Consensus 296 ~~~~d 300 (430)
T 3tc9_A 296 RSDYD 300 (430)
T ss_dssp EEEEE
T ss_pred EEeCC
Confidence 87655
No 257
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=94.23 E-value=0.71 Score=30.40 Aligned_cols=68 Identities=9% Similarity=-0.074 Sum_probs=44.7
Q ss_pred CeeEEEECCCCCeEEEE-eCCCeEEEEEcCCCce----eccCCCcEEEEEecCCcceeeeeeecccEE-EEecCCCcEEE
Q 036317 14 DANEVKLSNDGRLMLLT-TLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVALSVLILRSWV-LEGSGDGSVYA 87 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~~-~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i-~t~s~d~~i~~ 87 (106)
....++++++++.+..+ ..++.|..+|...... ......+..+++++++ ..| ++-..++.|.+
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~-----------~~lyv~d~~~~~I~~ 105 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLG-----------RTIFWTDSQLDRIEV 105 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTT-----------TEEEEEETTTTEEEE
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecC-----------CeEEEEECCCCEEEE
Confidence 34688999976666554 4678999999866544 1122356678999875 433 34445567888
Q ss_pred EECCC
Q 036317 88 WSARS 92 (106)
Q Consensus 88 wd~~~ 92 (106)
+++..
T Consensus 106 ~~~~g 110 (267)
T 1npe_A 106 AKMDG 110 (267)
T ss_dssp EETTS
T ss_pred EEcCC
Confidence 87753
No 258
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=94.16 E-value=0.25 Score=37.46 Aligned_cols=67 Identities=10% Similarity=0.146 Sum_probs=47.1
Q ss_pred EEEECC-CCCeEEEEeCCC-----------eEEEEEcCCCce------ec-cCCCcEEEEEecCCcceeeeeeecccEEE
Q 036317 17 EVKLSN-DGRLMLLTTLEG-----------HIHVLHSFQGTL------PV-SHNSTLEASFSQHLSLVALSVLILRSWVL 77 (106)
Q Consensus 17 ~v~~sp-dg~~l~~~~~~~-----------~i~l~d~~~~~~------~~-~~~~~~~~~fs~d~~~~~~~~~~~~~~i~ 77 (106)
++++.| +|+.++.++.+. .+.+||..+++. +. .......+++.+++ +.++
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g-----------~lyv 258 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNG-----------QIVV 258 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTS-----------CEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCC-----------CEEE
Confidence 667777 888888876542 578999988875 11 12223346778899 8888
Q ss_pred EecC-CCcEEEEECCCCC
Q 036317 78 EGSG-DGSVYAWSARSGK 94 (106)
Q Consensus 78 t~s~-d~~i~~wd~~~~~ 94 (106)
.|+. +..+.+||.++++
T Consensus 259 ~GG~~~~~v~~yd~~t~~ 276 (656)
T 1k3i_A 259 TGGNDAKKTSLYDSSSDS 276 (656)
T ss_dssp ECSSSTTCEEEEEGGGTE
T ss_pred eCCCCCCceEEecCcCCc
Confidence 8774 4589999988765
No 259
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=93.98 E-value=0.22 Score=33.83 Aligned_cols=64 Identities=14% Similarity=-0.047 Sum_probs=42.9
Q ss_pred CeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce---------eccCC--CcEEEEEecCCcceeeeeeecccEEEEecCC
Q 036317 14 DANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL---------PVSHN--STLEASFSQHLSLVALSVLILRSWVLEGSGD 82 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~---------~~~~~--~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d 82 (106)
.+..++|+|+|...++ .++.++-.+..+... .+..+ ....+-|.|+| ...+. .|
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G-----------~LYav--~d 106 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNG-----------YLYAV--SK 106 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTS-----------CEEEE--ET
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCC-----------CEEEe--CC
Confidence 6789999999996666 777777777644222 11111 13568899999 76555 55
Q ss_pred CcEEEEECCC
Q 036317 83 GSVYAWSARS 92 (106)
Q Consensus 83 ~~i~~wd~~~ 92 (106)
|.|+-++--+
T Consensus 107 G~iyr~~pP~ 116 (236)
T 1tl2_A 107 DKLYKASPPQ 116 (236)
T ss_dssp TEEEEESCCC
T ss_pred CEEEEeCCCc
Confidence 8898887643
No 260
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=93.50 E-value=0.19 Score=38.40 Aligned_cols=52 Identities=19% Similarity=0.248 Sum_probs=37.6
Q ss_pred CeEEEEEcCCCce--ec-cCCCcEEEEEecCCcceeeeeeecccEEEEecCCCcEEEEECCCCCCC
Q 036317 34 GHIHVLHSFQGTL--PV-SHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSVYAWSARSGKEP 96 (106)
Q Consensus 34 ~~i~l~d~~~~~~--~~-~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~~wd~~~~~~v 96 (106)
+.+.-||..+|+. .. .........+...+ ..|+.++.|+.++.||.++|+.+
T Consensus 438 g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~g-----------g~vf~g~~dg~l~a~d~~tG~~l 492 (668)
T 1kv9_A 438 GALLAWDPVKQKAAWKVPYPTHWNGGTLSTAG-----------NLVFQGTAAGQMHAYSADKGEAL 492 (668)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCCCEEEETT-----------TEEEEECTTSEEEEEETTTCCEE
T ss_pred ceEEEEeCCCCcEEEEccCCCCCcCceeEeCC-----------CEEEEECCcccchhhhhhcChhh
Confidence 7789999999987 11 11222223445567 78888999999999999999843
No 261
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=93.26 E-value=0.23 Score=34.37 Aligned_cols=26 Identities=12% Similarity=0.130 Sum_probs=20.7
Q ss_pred cEEEEecCCCcEEEEECCCCCCCcEE
Q 036317 74 SWVLEGSGDGSVYAWSARSGKEPPVI 99 (106)
Q Consensus 74 ~~i~t~s~d~~i~~wd~~~~~~v~~i 99 (106)
..|+.++.+|.++++|.++|+.+...
T Consensus 319 ~~l~v~~~~g~l~~~d~~tG~~~~~~ 344 (376)
T 3q7m_A 319 GNLVVGDSEGYLHWINVEDGRFVAQQ 344 (376)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEE
Confidence 56778888999999999999844333
No 262
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=92.82 E-value=1.1 Score=33.73 Aligned_cols=76 Identities=8% Similarity=0.128 Sum_probs=51.0
Q ss_pred eEEEECCCCCeEEEEeC--------------------C----CeEEEEEcCCCce----ec-cC--------CCcEEEEE
Q 036317 16 NEVKLSNDGRLMLLTTL--------------------E----GHIHVLHSFQGTL----PV-SH--------NSTLEASF 58 (106)
Q Consensus 16 ~~v~~spdg~~l~~~~~--------------------~----~~i~l~d~~~~~~----~~-~~--------~~~~~~~f 58 (106)
..++++|+...+.+++. + +.+.-+|..+|+. +. ++ ....-+..
T Consensus 249 ~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~ 328 (582)
T 1flg_A 249 QSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDY 328 (582)
T ss_dssp SCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEE
T ss_pred CCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEee
Confidence 45778888777766653 2 5789999999988 11 11 11111222
Q ss_pred e-cCCcceeeeeeeccc---EEEEecCCCcEEEEECCCCCCCcEEEeC
Q 036317 59 S-QHLSLVALSVLILRS---WVLEGSGDGSVYAWSARSGKEPPVIKWA 102 (106)
Q Consensus 59 s-~d~~~~~~~~~~~~~---~i~t~s~d~~i~~wd~~~~~~v~~i~~s 102 (106)
. .+| + .++.++.+|.++++|.++|+.+....+.
T Consensus 329 ~~~~G-----------~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~ 365 (582)
T 1flg_A 329 KAKDG-----------KIVKATAHADRNGFFYVVDRSNGKLQNAFPFV 365 (582)
T ss_dssp ECSSS-----------CEEEEEEEECTTSEEEEEETTTCCEEEEEESS
T ss_pred ecCCC-----------CEEEEEEEECCCceEEEEECCCCCEecccccc
Confidence 2 466 4 6788999999999999999966555554
No 263
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=92.51 E-value=0.33 Score=36.92 Aligned_cols=54 Identities=17% Similarity=0.178 Sum_probs=34.1
Q ss_pred CCeEEEEEcCCCce--ecc-CCCcEEEEEecCCcceeeeeeecccEEEEecCCCcEEEEECCCCCCCc
Q 036317 33 EGHIHVLHSFQGTL--PVS-HNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSVYAWSARSGKEPP 97 (106)
Q Consensus 33 ~~~i~l~d~~~~~~--~~~-~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~~wd~~~~~~v~ 97 (106)
.+.+.-||..+|+. ... ..+...-.....+ ..|..++.|+.++.+|.++|+.+.
T Consensus 452 ~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tag-----------g~vf~gt~dg~l~A~D~~tG~~lW 508 (599)
T 1w6s_A 452 LGQIKAYNAITGDYKWEKMERFAVWGGTMATAG-----------DLVFYGTLDGYLKARDSDTGDLLW 508 (599)
T ss_dssp CEEEEEECTTTCCEEEEEEESSCCCSBCEEETT-----------TEEEEECTTSEEEEEETTTCCEEE
T ss_pred cCeEEEEECCCCCEEeEecCCCCccCcceEecC-----------CEEEEECCCCeEEEEECCCCCEEE
Confidence 36777888888876 111 1111111123344 566778899999999999999433
No 264
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=92.30 E-value=1.8 Score=29.26 Aligned_cols=69 Identities=10% Similarity=0.068 Sum_probs=42.4
Q ss_pred CeeEEEECCCCCeEEEEeCC--CeEEEEEcCCCcee----ccC-CCcEEEEEecCCcceeeeeeecccEEEEecCCCcEE
Q 036317 14 DANEVKLSNDGRLMLLTTLE--GHIHVLHSFQGTLP----VSH-NSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSVY 86 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~~~~~--~~i~l~d~~~~~~~----~~~-~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~ 86 (106)
....++++++|+.+++.... ..+..+|..++++. ... ......+..+++ ..+++-..++.|+
T Consensus 73 ~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~-----------~~~v~d~~~g~i~ 141 (306)
T 2p4o_A 73 KVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDT-----------QYLTADSYRGAIW 141 (306)
T ss_dssp EEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSS-----------EEEEEETTTTEEE
T ss_pred CceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCC-----------cEEEEECCCCeEE
Confidence 57789999999966555433 24777787777761 111 122234445555 5455555678888
Q ss_pred EEECCCC
Q 036317 87 AWSARSG 93 (106)
Q Consensus 87 ~wd~~~~ 93 (106)
.+|..++
T Consensus 142 ~~d~~~~ 148 (306)
T 2p4o_A 142 LIDVVQP 148 (306)
T ss_dssp EEETTTT
T ss_pred EEeCCCC
Confidence 8887643
No 265
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=91.78 E-value=0.78 Score=33.22 Aligned_cols=67 Identities=15% Similarity=0.246 Sum_probs=45.1
Q ss_pred CeeEEEECC-CCCeEEEEeCCCeEEEEEcCCCce-----e-ccCCCcEEEEEecCCcceeeeeeecccEE-EEecCCCcE
Q 036317 14 DANEVKLSN-DGRLMLLTTLEGHIHVLHSFQGTL-----P-VSHNSTLEASFSQHLSLVALSVLILRSWV-LEGSGDGSV 85 (106)
Q Consensus 14 ~v~~v~~sp-dg~~l~~~~~~~~i~l~d~~~~~~-----~-~~~~~~~~~~fs~d~~~~~~~~~~~~~~i-~t~s~d~~i 85 (106)
....++++| +|..+++-..++.|+.+|..++.. . ........++|+|++ ++| ++-..++.|
T Consensus 229 ~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG-----------~~LYvad~~~~~I 297 (433)
T 4hw6_A 229 GAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTG-----------DWAYIIYNGKHCI 297 (433)
T ss_dssp SBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTS-----------SEEEEEETTTTEE
T ss_pred CCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCC-----------CEEEEEeCCCCEE
Confidence 456788999 677555656778899999887765 1 112223469999999 744 344456788
Q ss_pred EEEECC
Q 036317 86 YAWSAR 91 (106)
Q Consensus 86 ~~wd~~ 91 (106)
+.+++.
T Consensus 298 ~~~~~d 303 (433)
T 4hw6_A 298 YRVDYN 303 (433)
T ss_dssp EEEEBC
T ss_pred EEEeCC
Confidence 887765
No 266
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=91.77 E-value=2.3 Score=30.24 Aligned_cols=68 Identities=13% Similarity=0.106 Sum_probs=50.3
Q ss_pred CeeEEEECCCCCeEEEEeCC-CeEEEEEcCCCce-------eccCC--CcEEEEEecCCcceeeeeeecccEEEEecCCC
Q 036317 14 DANEVKLSNDGRLMLLTTLE-GHIHVLHSFQGTL-------PVSHN--STLEASFSQHLSLVALSVLILRSWVLEGSGDG 83 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~~~~~-~~i~l~d~~~~~~-------~~~~~--~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~ 83 (106)
..+.++.+++|+..++.+.. +.|..++...... +.... ....++++||| +.|+....++
T Consensus 138 ~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg-----------~~Liv~~~~g 206 (334)
T 2p9w_A 138 GVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHS-----------NKLIAFGGPR 206 (334)
T ss_dssp EEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTT-----------TEEEEESSSS
T ss_pred CCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCC-----------CEEEEEcCCC
Confidence 47899999999988888888 8888877653333 11111 13479999999 8777776688
Q ss_pred cEEEEECCC
Q 036317 84 SVYAWSARS 92 (106)
Q Consensus 84 ~i~~wd~~~ 92 (106)
.+..+|+.+
T Consensus 207 ~L~~fD~~~ 215 (334)
T 2p9w_A 207 ALTAFDVSK 215 (334)
T ss_dssp SEEEEECSS
T ss_pred eEEEEcCCC
Confidence 999999873
No 267
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=91.70 E-value=0.85 Score=30.44 Aligned_cols=64 Identities=19% Similarity=0.195 Sum_probs=39.3
Q ss_pred CeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce----eccCCCcEEEEEecCCcceeeeeeecccEEEEecCCCcEEEEE
Q 036317 14 DANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSVYAWS 89 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~~wd 89 (106)
.+.++..+++|+ +.+++.++.+..+|.. ++. ......+..+...+++ ...++. +.++.+|
T Consensus 138 ~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g-----------~l~v~t---~~l~~~d 201 (330)
T 3hxj_A 138 IYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDG-----------TIYFGS---DKVYAIN 201 (330)
T ss_dssp CCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTC-----------CEEEES---SSEEEEC
T ss_pred eeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCC-----------EEEEEe---CEEEEEC
Confidence 456667777887 6667777889999987 655 1122233345556666 543333 5677777
Q ss_pred CCCCC
Q 036317 90 ARSGK 94 (106)
Q Consensus 90 ~~~~~ 94 (106)
.+++
T Consensus 202 -~~g~ 205 (330)
T 3hxj_A 202 -PDGT 205 (330)
T ss_dssp -TTSC
T ss_pred -CCCc
Confidence 5554
No 268
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=91.59 E-value=1.7 Score=32.22 Aligned_cols=68 Identities=16% Similarity=0.289 Sum_probs=46.7
Q ss_pred CCCeeEEEECCC---CCeEEEEeCCCeEEEEEcCCCce-e----------c---cCCCcEEEEEecCCcceeeeeeeccc
Q 036317 12 VSDANEVKLSND---GRLMLLTTLEGHIHVLHSFQGTL-P----------V---SHNSTLEASFSQHLSLVALSVLILRS 74 (106)
Q Consensus 12 ~~~v~~v~~spd---g~~l~~~~~~~~i~l~d~~~~~~-~----------~---~~~~~~~~~fs~d~~~~~~~~~~~~~ 74 (106)
..+|..+.|+|- |..+++-..|+.|++||+..... + + ....+.+++|+.++ .--
T Consensus 124 ~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~---------lTL 194 (452)
T 3pbp_A 124 KSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDG---------LTL 194 (452)
T ss_dssp CCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTS---------SCE
T ss_pred CCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCC---------cEE
Confidence 458999999996 45789999999999999875221 0 0 11345678888876 113
Q ss_pred EEEEecCCCcEEEE
Q 036317 75 WVLEGSGDGSVYAW 88 (106)
Q Consensus 75 ~i~t~s~d~~i~~w 88 (106)
|+++.+++|.|+-.
T Consensus 195 Yvl~~t~~GDIYAl 208 (452)
T 3pbp_A 195 YCLNTTEGGDIFAF 208 (452)
T ss_dssp EEEECTTSCEEEEE
T ss_pred EEEecCCCCCEEEE
Confidence 45556677777643
No 269
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=91.53 E-value=2.5 Score=30.82 Aligned_cols=50 Identities=18% Similarity=0.327 Sum_probs=33.1
Q ss_pred CCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce------ec------cCCCcEEEEEecC
Q 036317 12 VSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL------PV------SHNSTLEASFSQH 61 (106)
Q Consensus 12 ~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~------~~------~~~~~~~~~fs~d 61 (106)
-.....++|.|||+.+++-...+.|.+++..+++. .. ....+..++|+||
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pd 87 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD 87 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCC
Confidence 34677999999999555443335788888665654 10 1234567999995
No 270
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=90.98 E-value=2.9 Score=29.17 Aligned_cols=46 Identities=20% Similarity=0.338 Sum_probs=33.3
Q ss_pred CCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce------e---ccCCCcEEEEEecC
Q 036317 13 SDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL------P---VSHNSTLEASFSQH 61 (106)
Q Consensus 13 ~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~------~---~~~~~~~~~~fs~d 61 (106)
..-..++|+|||+ ++++...+.|.+++ +++. + .....+..++|+||
T Consensus 31 ~~P~~ia~~pdG~-l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pd 85 (352)
T 2ism_A 31 EVPWALAFLPDGG-MLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPR 85 (352)
T ss_dssp SCEEEEEECTTSC-EEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTT
T ss_pred CCceEEEEcCCCe-EEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCC
Confidence 4667999999999 55666779999998 4443 1 11235677999998
No 271
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=90.80 E-value=1.4 Score=33.23 Aligned_cols=68 Identities=7% Similarity=0.026 Sum_probs=46.5
Q ss_pred eEEEECCCCCeEEEEe-CCCeEEEEEcCCCce----eccCCCc-EEEEEecCCcceeeeeeecccEEEEec-CC-----C
Q 036317 16 NEVKLSNDGRLMLLTT-LEGHIHVLHSFQGTL----PVSHNST-LEASFSQHLSLVALSVLILRSWVLEGS-GD-----G 83 (106)
Q Consensus 16 ~~v~~spdg~~l~~~~-~~~~i~l~d~~~~~~----~~~~~~~-~~~~fs~d~~~~~~~~~~~~~~i~t~s-~d-----~ 83 (106)
..+++.++|+.+++++ .+..+++||..+.+- .....+. ..++..+++ +.++.|+ .+ .
T Consensus 246 ~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg-----------~iyv~GG~~~~~~~~~ 314 (656)
T 1k3i_A 246 PGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDG-----------RVFTIGGSWSGGVFEK 314 (656)
T ss_dssp CEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTS-----------CEEEECCCCCSSSCCC
T ss_pred ccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCC-----------eEEEEeCcccCCcccc
Confidence 3467789999888887 456899999887765 1111221 234555788 7777776 33 5
Q ss_pred cEEEEECCCCC
Q 036317 84 SVYAWSARSGK 94 (106)
Q Consensus 84 ~i~~wd~~~~~ 94 (106)
.+.+||.++++
T Consensus 315 ~~e~yd~~t~~ 325 (656)
T 1k3i_A 315 NGEVYSPSSKT 325 (656)
T ss_dssp CEEEEETTTTE
T ss_pred cceEeCCCCCc
Confidence 79999998765
No 272
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=90.06 E-value=1.9 Score=28.68 Aligned_cols=68 Identities=24% Similarity=0.396 Sum_probs=40.8
Q ss_pred CCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce----eccCCCcEEEEEecCCcceeeeeeecccEEEEecCCCcEEE
Q 036317 12 VSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSVYA 87 (106)
Q Consensus 12 ~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~~ 87 (106)
...+.++..+++|. +.+++.++.+..+|. +++. .........+...+++ . |..++.++.++.
T Consensus 214 ~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g-----------~-l~v~t~~ggl~~ 279 (330)
T 3hxj_A 214 YWTVTRPAISEDGT-IYVTSLDGHLYAINP-DGTEKWRFKTGKRIESSPVIGNTD-----------T-IYFGSYDGHLYA 279 (330)
T ss_dssp SCCCSCCEECTTSC-EEEEETTTEEEEECT-TSCEEEEEECSSCCCSCCEECTTS-----------C-EEEECTTCEEEE
T ss_pred CcceeceEECCCCe-EEEEcCCCeEEEECC-CCCEeEEeeCCCCccccceEcCCC-----------e-EEEecCCCCEEE
Confidence 34677888888887 555666777888875 4443 1111112224445555 3 455666777888
Q ss_pred EECCCCC
Q 036317 88 WSARSGK 94 (106)
Q Consensus 88 wd~~~~~ 94 (106)
+|. +++
T Consensus 280 ~d~-~g~ 285 (330)
T 3hxj_A 280 INP-DGT 285 (330)
T ss_dssp ECT-TSC
T ss_pred ECC-CCc
Confidence 885 555
No 273
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=89.98 E-value=3.9 Score=31.08 Aligned_cols=79 Identities=15% Similarity=0.088 Sum_probs=50.6
Q ss_pred EEEECCCCCeEEEEeCC----------------CeEEEEEcCCCce----ec-cC--------CCcEEEEEe-cCCccee
Q 036317 17 EVKLSNDGRLMLLTTLE----------------GHIHVLHSFQGTL----PV-SH--------NSTLEASFS-QHLSLVA 66 (106)
Q Consensus 17 ~v~~spdg~~l~~~~~~----------------~~i~l~d~~~~~~----~~-~~--------~~~~~~~fs-~d~~~~~ 66 (106)
..+++++...+..++.+ ..+.-+|..+|+. +. ++ ....-+... .+|+
T Consensus 245 ~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~--- 321 (599)
T 1w6s_A 245 WYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGK--- 321 (599)
T ss_dssp CCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSC---
T ss_pred ceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCc---
Confidence 45677777777776654 3788899999988 11 11 111112222 4560
Q ss_pred eeeeecccEEEEecCCCcEEEEECCCCCCCcEEEeCC
Q 036317 67 LSVLILRSWVLEGSGDGSVYAWSARSGKEPPVIKWAP 103 (106)
Q Consensus 67 ~~~~~~~~~i~t~s~d~~i~~wd~~~~~~v~~i~~sp 103 (106)
.++.++.++.+|.+++.|.++|+.+....+.|
T Consensus 322 -----~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~ 353 (599)
T 1w6s_A 322 -----ARKLLTHPDRNGIVYTLDRTDGALVSANKLDD 353 (599)
T ss_dssp -----EEEEEEEECTTSEEEEEETTTCCEEEEEESST
T ss_pred -----EEEEEEEECCCcEEEEEECCCCCEeecccccC
Confidence 00256778899999999999999666665543
No 274
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=89.91 E-value=2.5 Score=33.85 Aligned_cols=33 Identities=9% Similarity=0.114 Sum_probs=29.8
Q ss_pred CeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce
Q 036317 14 DANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL 46 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~ 46 (106)
.+.++...++..++.+.+.|+++++|++.+++.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~ 269 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQC 269 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCe
Confidence 577888888999999999999999999999876
No 275
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=89.57 E-value=3.8 Score=29.59 Aligned_cols=70 Identities=9% Similarity=0.139 Sum_probs=39.7
Q ss_pred CCeeEEEECCCCCeEEEEeCC-----CeEEEEEcCCCce----eccCCCcEEEEEec-CCcceeeeeeecccEEEEecCC
Q 036317 13 SDANEVKLSNDGRLMLLTTLE-----GHIHVLHSFQGTL----PVSHNSTLEASFSQ-HLSLVALSVLILRSWVLEGSGD 82 (106)
Q Consensus 13 ~~v~~v~~spdg~~l~~~~~~-----~~i~l~d~~~~~~----~~~~~~~~~~~fs~-d~~~~~~~~~~~~~~i~t~s~d 82 (106)
.....++++++|+ |.++... ..+..++...+.. ......+..++++| ++ ...++-..+
T Consensus 182 ~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~~~~~P~giavd~~~G-----------~lyv~d~~~ 249 (433)
T 4hw6_A 182 GQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGFTERLSLCNARGAKTCAVHPQNG-----------KIYYTRYHH 249 (433)
T ss_dssp SCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTTCCEEEEEECSSBCCCEECTTTC-----------CEEECBTTC
T ss_pred CCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCeeccccccccCCCCEEEEeCCCC-----------eEEEEECCC
Confidence 4688999999999 5555432 1233334322211 11122344577788 56 544455556
Q ss_pred CcEEEEECCCCC
Q 036317 83 GSVYAWSARSGK 94 (106)
Q Consensus 83 ~~i~~wd~~~~~ 94 (106)
+.|+.+|..+++
T Consensus 250 ~~V~~~d~~~g~ 261 (433)
T 4hw6_A 250 AMISSYDPATGT 261 (433)
T ss_dssp SEEEEECTTTCC
T ss_pred CEEEEEECCCCe
Confidence 677777776554
No 276
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=88.11 E-value=4.9 Score=30.07 Aligned_cols=76 Identities=13% Similarity=0.022 Sum_probs=49.5
Q ss_pred EEEECCCCCeEEEEeCC----------------CeEEEEEcCCCce----ec-cC--------CCcEEEEEecCCcceee
Q 036317 17 EVKLSNDGRLMLLTTLE----------------GHIHVLHSFQGTL----PV-SH--------NSTLEASFSQHLSLVAL 67 (106)
Q Consensus 17 ~v~~spdg~~l~~~~~~----------------~~i~l~d~~~~~~----~~-~~--------~~~~~~~fs~d~~~~~~ 67 (106)
.++++++...+..++.+ +.+..+|..+|+. +. .+ ..+.-+...++|
T Consensus 239 ~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G----- 313 (571)
T 2ad6_A 239 WYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNG----- 313 (571)
T ss_dssp CCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETT-----
T ss_pred eEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCC-----
Confidence 46677776666665532 3588899999987 11 11 122223333577
Q ss_pred eeeeccc---EEEEecCCCcEEEEECCCCCCCcEEEeCC
Q 036317 68 SVLILRS---WVLEGSGDGSVYAWSARSGKEPPVIKWAP 103 (106)
Q Consensus 68 ~~~~~~~---~i~t~s~d~~i~~wd~~~~~~v~~i~~sp 103 (106)
+ .++.++.+|.+++.|.++|+.+....+.+
T Consensus 314 ------~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~ 346 (571)
T 2ad6_A 314 ------KMTPLLSHIDRNGILYTLNRENGNLIVAEKVDP 346 (571)
T ss_dssp ------EEEEEEEEECTTSEEEEEETTTCCEEEEEESST
T ss_pred ------cEEEEEEEeCCCcEEEEEECCCCCEEeeecccC
Confidence 5 46778899999999999999665555543
No 277
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=88.04 E-value=4.5 Score=32.41 Aligned_cols=21 Identities=10% Similarity=-0.065 Sum_probs=20.1
Q ss_pred cEEEEecCCCcEEEEECCCCC
Q 036317 74 SWVLEGSGDGSVYAWSARSGK 94 (106)
Q Consensus 74 ~~i~t~s~d~~i~~wd~~~~~ 94 (106)
.++.+-+.|+++++|++.+|+
T Consensus 248 ~~lftl~~D~~LRiWsl~t~~ 268 (950)
T 4gq2_M 248 NVLVMLSLDYKLKVLDLSTNQ 268 (950)
T ss_dssp TEEEEEETTCEEEEEETTTTE
T ss_pred cEEEEEECCCEEEEEECCCCC
Confidence 899999999999999999997
No 278
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=87.80 E-value=2.3 Score=32.52 Aligned_cols=55 Identities=16% Similarity=0.218 Sum_probs=35.2
Q ss_pred CeeEEEECCCCCeEEEEeCC------------CeEEEEEcCCCce----eccC-CCcEEEEEecCCcceeee
Q 036317 14 DANEVKLSNDGRLMLLTTLE------------GHIHVLHSFQGTL----PVSH-NSTLEASFSQHLSLVALS 68 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~~~~~------------~~i~l~d~~~~~~----~~~~-~~~~~~~fs~d~~~~~~~ 68 (106)
..-.|.|+|+|+.++..-.+ +.+.+.+..++++ .... ..++.++|+||++.|+++
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 34689999999944443221 3455667777776 2222 345679999999655543
No 279
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=87.26 E-value=4.2 Score=28.47 Aligned_cols=48 Identities=19% Similarity=0.268 Sum_probs=33.7
Q ss_pred CCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCc-e----e---ccCCCcEEEEEecC
Q 036317 12 VSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGT-L----P---VSHNSTLEASFSQH 61 (106)
Q Consensus 12 ~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~-~----~---~~~~~~~~~~fs~d 61 (106)
-.....++|.|||+ ++++..++.|+++| .+++ . + .....+..++++|+
T Consensus 28 l~~P~~ia~~pdG~-l~V~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pd 83 (354)
T 3a9g_A 28 LEVPWSIAPLGGGR-YLVTERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPE 83 (354)
T ss_dssp CSCEEEEEEEETTE-EEEEETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTT
T ss_pred CCCCeEEEEcCCCe-EEEEeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCC
Confidence 34678999999998 66666779999987 3444 1 1 11234677999998
No 280
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=86.60 E-value=4.7 Score=32.84 Aligned_cols=21 Identities=10% Similarity=-0.065 Sum_probs=20.2
Q ss_pred cEEEEecCCCcEEEEECCCCC
Q 036317 74 SWVLEGSGDGSVYAWSARSGK 94 (106)
Q Consensus 74 ~~i~t~s~d~~i~~wd~~~~~ 94 (106)
.++.+-+.|+++++|++.+++
T Consensus 250 ~~lftL~~D~~LRiWsl~t~~ 270 (1139)
T 4fhn_B 250 NVLVMLSLDYKLKVLDLSTNQ 270 (1139)
T ss_dssp TEEEEEBTTCEEEEEETTTTE
T ss_pred cEEEEEeCCCEEEEEECCCCC
Confidence 899999999999999999997
No 281
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=86.56 E-value=4.6 Score=31.18 Aligned_cols=68 Identities=15% Similarity=0.148 Sum_probs=48.1
Q ss_pred CeeEEEECCCCCeEEEEe-CCCeEEEEEcCCC------ce---------eccC-CCcEEEEEecCCcceeeeeeecccEE
Q 036317 14 DANEVKLSNDGRLMLLTT-LEGHIHVLHSFQG------TL---------PVSH-NSTLEASFSQHLSLVALSVLILRSWV 76 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~~~-~~~~i~l~d~~~~------~~---------~~~~-~~~~~~~fs~d~~~~~~~~~~~~~~i 76 (106)
....+.++|||+|+++++ -+.++.++|...- ++ ...- -.+....|.++| .-.
T Consensus 324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G-----------~aY 392 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRG-----------NAY 392 (638)
T ss_dssp SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSS-----------EEE
T ss_pred CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCC-----------ceE
Confidence 445788999999998776 5688999997631 11 1111 134668999999 655
Q ss_pred EEecCCCcEEEEECCC
Q 036317 77 LEGSGDGSVYAWSARS 92 (106)
Q Consensus 77 ~t~s~d~~i~~wd~~~ 92 (106)
.|-.-|.+|.-|+++.
T Consensus 393 TtlfidSqvvkWni~~ 408 (638)
T 3sbq_A 393 TTLFIDSQVVKWNMEE 408 (638)
T ss_dssp EEETTTTEEEEEEHHH
T ss_pred eeeeecceEEEEeccH
Confidence 5666788899998865
No 282
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=86.32 E-value=2.8 Score=29.86 Aligned_cols=66 Identities=5% Similarity=0.008 Sum_probs=42.5
Q ss_pred CCeeEEEECCCCCeEEEEeC-----------------CCeEEEEEcCCCce---eccCCCcEEEEEecCCcceeeeeeec
Q 036317 13 SDANEVKLSNDGRLMLLTTL-----------------EGHIHVLHSFQGTL---PVSHNSTLEASFSQHLSLVALSVLIL 72 (106)
Q Consensus 13 ~~v~~v~~spdg~~l~~~~~-----------------~~~i~l~d~~~~~~---~~~~~~~~~~~fs~d~~~~~~~~~~~ 72 (106)
...+++.+.++|.++++... .+.+.-+|. ++. ...-.....++||||+
T Consensus 165 ~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~~~~~~~~l~~pNGia~spDg---------- 232 (355)
T 3sre_A 165 PSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--NDVRVVAEGFDFANGINISPDG---------- 232 (355)
T ss_dssp SSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TCCEEEEEEESSEEEEEECTTS----------
T ss_pred CCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--CeEEEeecCCcccCcceECCCC----------
Confidence 36889999999997776541 234555554 333 1122345679999999
Q ss_pred ccEEEEe-cCCCcEEEEECC
Q 036317 73 RSWVLEG-SGDGSVYAWSAR 91 (106)
Q Consensus 73 ~~~i~t~-s~d~~i~~wd~~ 91 (106)
+++..+ +..+.|+.|++.
T Consensus 233 -~~lYvadt~~~~I~~~~~~ 251 (355)
T 3sre_A 233 -KYVYIAELLAHKIHVYEKH 251 (355)
T ss_dssp -SEEEEEEGGGTEEEEEEEC
T ss_pred -CEEEEEeCCCCeEEEEEEC
Confidence 665544 345688888876
No 283
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=85.37 E-value=4.2 Score=31.22 Aligned_cols=56 Identities=16% Similarity=0.219 Sum_probs=37.4
Q ss_pred CCeeEEEECCCCCeEEEEeC------------CCeEEEEEcCCCcee----cc-CCCcEEEEEecCCcceeee
Q 036317 13 SDANEVKLSNDGRLMLLTTL------------EGHIHVLHSFQGTLP----VS-HNSTLEASFSQHLSLVALS 68 (106)
Q Consensus 13 ~~v~~v~~spdg~~l~~~~~------------~~~i~l~d~~~~~~~----~~-~~~~~~~~fs~d~~~~~~~ 68 (106)
.....|.|+++|...+..-. ...+..++..++++. .. ...++.++|+||++.|.++
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 36679999999996664422 125677777778771 11 2245789999999555543
No 284
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=85.19 E-value=4 Score=28.53 Aligned_cols=48 Identities=17% Similarity=0.246 Sum_probs=33.2
Q ss_pred CCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce-------e----ccCCCcEEEEEecC
Q 036317 13 SDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL-------P----VSHNSTLEASFSQH 61 (106)
Q Consensus 13 ~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~-------~----~~~~~~~~~~fs~d 61 (106)
.....|+|.|||++++++...+.|++++. ++.. + ........++++|+
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~-~g~~~~~~~~~~~v~~~g~~g~~gia~~pd 76 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQA-GKGLSAPLSGVPDVWAHGQGGLLDVVLAPD 76 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEET-TTEECCCCBSCCCCCCSTTCSEEEEEECTT
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeC-CCceeeEecCCcccccCCCCCceeEEECCC
Confidence 36679999999995666667899999985 3332 1 11223467899996
No 285
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=84.39 E-value=8.5 Score=27.27 Aligned_cols=49 Identities=14% Similarity=0.143 Sum_probs=34.2
Q ss_pred CCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCcee----------ccCCCcEEEEEecC
Q 036317 13 SDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTLP----------VSHNSTLEASFSQH 61 (106)
Q Consensus 13 ~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~~----------~~~~~~~~~~fs~d 61 (106)
..-..++|.|||+.+++--..+.|++++..+++.. ........++|+||
T Consensus 32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pd 90 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPD 90 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTT
T ss_pred CCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccc
Confidence 46779999999994444434899999987666541 12334567999986
No 286
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=84.24 E-value=6 Score=29.55 Aligned_cols=66 Identities=6% Similarity=-0.015 Sum_probs=41.9
Q ss_pred CeeEEEECCCCCeE-EEEeCCCeEEEEEcC-------CCce-----------------eccCCCcEEEEEecCCcceeee
Q 036317 14 DANEVKLSNDGRLM-LLTTLEGHIHVLHSF-------QGTL-----------------PVSHNSTLEASFSQHLSLVALS 68 (106)
Q Consensus 14 ~v~~v~~spdg~~l-~~~~~~~~i~l~d~~-------~~~~-----------------~~~~~~~~~~~fs~d~~~~~~~ 68 (106)
....++++|++.+| ++-..++.+..+|.. ++.. .........++|+|+|
T Consensus 248 ~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G------ 321 (496)
T 3kya_A 248 QCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTG------ 321 (496)
T ss_dssp CCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTS------
T ss_pred CceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCC------
Confidence 35678899955445 555677889999987 5543 0112345679999999
Q ss_pred eeecccEEE-EecCCCcEEEEEC
Q 036317 69 VLILRSWVL-EGSGDGSVYAWSA 90 (106)
Q Consensus 69 ~~~~~~~i~-t~s~d~~i~~wd~ 90 (106)
+++. +=..+..|+.++.
T Consensus 322 -----~~lYvaD~~~h~I~kid~ 339 (496)
T 3kya_A 322 -----KYAYFGVINNHYFMRSDY 339 (496)
T ss_dssp -----SEEEEEETTTTEEEEEEE
T ss_pred -----CEEEEEeCCCCEEEEEec
Confidence 7433 3344556777543
No 287
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=83.62 E-value=4.4 Score=28.83 Aligned_cols=49 Identities=24% Similarity=0.240 Sum_probs=32.9
Q ss_pred CeeEEEECCCCCeEEEE-eCCCeEEEEEcC-CCceec-----cCCCcEEEEEec-CC
Q 036317 14 DANEVKLSNDGRLMLLT-TLEGHIHVLHSF-QGTLPV-----SHNSTLEASFSQ-HL 62 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~~-~~~~~i~l~d~~-~~~~~~-----~~~~~~~~~fs~-d~ 62 (106)
.-+.++|||||+.+..+ +..+.|+.|+.. ++++.. ..+.+-.++..+ +|
T Consensus 222 ~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G 278 (355)
T 3sre_A 222 FANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTG 278 (355)
T ss_dssp SEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTC
T ss_pred ccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCC
Confidence 56789999999888665 467899999975 344411 122334567777 47
No 288
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=83.50 E-value=13 Score=28.46 Aligned_cols=70 Identities=14% Similarity=0.213 Sum_probs=48.0
Q ss_pred CCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCceec------------cCCCcEEEEEecCCcceeeeeeecccEEEEec
Q 036317 13 SDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTLPV------------SHNSTLEASFSQHLSLVALSVLILRSWVLEGS 80 (106)
Q Consensus 13 ~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~~~------------~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s 80 (106)
..|.++..+++|+ +-+++.++-+..+|..+++... ....+.++...+++ +.|..|.
T Consensus 357 ~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g-----------~~lWigt 424 (795)
T 4a2l_A 357 NVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKK-----------SLVYIGT 424 (795)
T ss_dssp SSEEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTT-----------TEEEEEE
T ss_pred CeeEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCC-----------CEEEEEe
Confidence 3699999999998 5556777778889988776511 12345566777888 6344455
Q ss_pred CCCcEEEEECCCCC
Q 036317 81 GDGSVYAWSARSGK 94 (106)
Q Consensus 81 ~d~~i~~wd~~~~~ 94 (106)
.++-+..+|.++++
T Consensus 425 ~~~Gl~~~d~~~~~ 438 (795)
T 4a2l_A 425 HAGGLSILHRNSGQ 438 (795)
T ss_dssp TTTEEEEEETTTCC
T ss_pred CcCceeEEeCCCCc
Confidence 55558888877654
No 289
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=82.32 E-value=11 Score=26.73 Aligned_cols=86 Identities=8% Similarity=0.005 Sum_probs=54.7
Q ss_pred eeecCCCCCCeeEEEECC-CCCeEEEEeCCCeEEEEEcCCCce-----ec----cCC--CcEEEEE---ecCCcceeeee
Q 036317 5 IFSDGGDVSDANEVKLSN-DGRLMLLTTLEGHIHVLHSFQGTL-----PV----SHN--STLEASF---SQHLSLVALSV 69 (106)
Q Consensus 5 ~~~~~~~~~~v~~v~~sp-dg~~l~~~~~~~~i~l~d~~~~~~-----~~----~~~--~~~~~~f---s~d~~~~~~~~ 69 (106)
.+.+.....--.+.+|++ +|.++++....++|..||...+.. +. ... ....+.+ .|++
T Consensus 5 ~i~~~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~g------- 77 (334)
T 2p9w_A 5 QIDVKVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSK------- 77 (334)
T ss_dssp EEEECCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCC-------
T ss_pred eEEecCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCC-------
Confidence 344554455667889987 555555555899999999876543 11 111 1246888 6888
Q ss_pred eecccEEEEec-------------CCCcEEEEECC---CCCCCcEEEe
Q 036317 70 LILRSWVLEGS-------------GDGSVYAWSAR---SGKEPPVIKW 101 (106)
Q Consensus 70 ~~~~~~i~t~s-------------~d~~i~~wd~~---~~~~v~~i~~ 101 (106)
+.++... .+..+..+|+. +++.+..+..
T Consensus 78 ----rL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL 121 (334)
T 2p9w_A 78 ----RLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNF 121 (334)
T ss_dssp ----EEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEES
T ss_pred ----cEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecC
Confidence 5544322 36789999999 8886555443
No 290
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=82.19 E-value=15 Score=28.16 Aligned_cols=69 Identities=12% Similarity=0.160 Sum_probs=46.6
Q ss_pred CCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCceec--------cCCCcEEEEEecCCcceeeeeeecccEEEEecCCCc
Q 036317 13 SDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTLPV--------SHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGS 84 (106)
Q Consensus 13 ~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~~~--------~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~ 84 (106)
..|.++..+++|+.+.+++.++.+..+|..+++... ....+.++...++| +..++.. + -
T Consensus 406 ~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g-----------~lwigt~-~-G 472 (795)
T 4a2l_A 406 NNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEG-----------NLWLGTL-S-A 472 (795)
T ss_dssp SCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSS-----------CEEEEES-S-C
T ss_pred ccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCC-----------CEEEEec-C-c
Confidence 478899999999856667777779999998887611 12345566677777 5444333 3 3
Q ss_pred EEEEECCCCC
Q 036317 85 VYAWSARSGK 94 (106)
Q Consensus 85 i~~wd~~~~~ 94 (106)
+.+||.++++
T Consensus 473 l~~~~~~~~~ 482 (795)
T 4a2l_A 473 LVRFNPEQRS 482 (795)
T ss_dssp EEEEETTTTE
T ss_pred eeEEeCCCCe
Confidence 7778776543
No 291
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=82.09 E-value=6 Score=29.53 Aligned_cols=49 Identities=10% Similarity=0.179 Sum_probs=34.1
Q ss_pred CeeEEEECC-CCCeEEEE-eCCCeEEEEEcCCCce----ec---cCCCcEEEEE-------ecCC
Q 036317 14 DANEVKLSN-DGRLMLLT-TLEGHIHVLHSFQGTL----PV---SHNSTLEASF-------SQHL 62 (106)
Q Consensus 14 ~v~~v~~sp-dg~~l~~~-~~~~~i~l~d~~~~~~----~~---~~~~~~~~~f-------s~d~ 62 (106)
....|+|+| ++..|.++ ...+.|+++|..++++ .. ....+..++| ++++
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G 204 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEA 204 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTT
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCC
Confidence 567999999 34445444 4457889999988887 11 1224677999 9999
No 292
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=81.91 E-value=11 Score=26.20 Aligned_cols=80 Identities=9% Similarity=-0.069 Sum_probs=48.2
Q ss_pred CeeEEEECCCCCeE-EEEeCCCeEEEEEcCCCce----eccCCCcEEEEEecCCcceeeeeeecccEEE-EecCC-CcEE
Q 036317 14 DANEVKLSNDGRLM-LLTTLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVALSVLILRSWVL-EGSGD-GSVY 86 (106)
Q Consensus 14 ~v~~v~~spdg~~l-~~~~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~-t~s~d-~~i~ 86 (106)
....+++++.+..| .+-...+.|.+.+...... ......+..++++|++ .+|. +-..+ +.|+
T Consensus 117 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~-----------g~ly~td~~~~~~I~ 185 (349)
T 3v64_C 117 SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPME-----------GTIYWTDWGNTPRIE 185 (349)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTT-----------TEEEEEECSSSCEEE
T ss_pred CccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCc-----------CeEEEeccCCCCEEE
Confidence 45678888765545 4445667888888754332 1223456778999866 4333 33333 6777
Q ss_pred EEECCCCC----------CCcEEEeCCC
Q 036317 87 AWSARSGK----------EPPVIKWAPG 104 (106)
Q Consensus 87 ~wd~~~~~----------~v~~i~~sp~ 104 (106)
..++.... .++.|+++|.
T Consensus 186 r~~~dG~~~~~~~~~~~~~PnGla~d~~ 213 (349)
T 3v64_C 186 ASSMDGSGRRIIADTHLFWPNGLTIDYA 213 (349)
T ss_dssp EEETTSCSCEESCCSSCSCEEEEEEETT
T ss_pred EEeCCCCCcEEEEECCCCCcceEEEeCC
Confidence 77765322 4567777763
No 293
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=81.60 E-value=11 Score=26.40 Aligned_cols=68 Identities=9% Similarity=-0.002 Sum_probs=39.5
Q ss_pred CeeEEEECCCCCeEE-EEeCCCeEEEEEcCCCce----eccCCCcEEEEEecCCcceeeeeeecccEEEEecCCCcEEEE
Q 036317 14 DANEVKLSNDGRLML-LTTLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSVYAW 88 (106)
Q Consensus 14 ~v~~v~~spdg~~l~-~~~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~~w 88 (106)
....++|++.+..|. +-...+.|+.++...... ......+..+++++.+. ...++-...+.|.+.
T Consensus 117 ~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g----------~lY~~d~~~~~I~~~ 186 (386)
T 3v65_B 117 NAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHD----------KLYWTDSGTSRIEVA 186 (386)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTT----------EEEEEETTTTEEEEC
T ss_pred ccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCC----------eEEEEcCCCCeEEEE
Confidence 567788987655554 445668888888766543 11222344577776541 333344445566666
Q ss_pred ECC
Q 036317 89 SAR 91 (106)
Q Consensus 89 d~~ 91 (106)
++.
T Consensus 187 ~~d 189 (386)
T 3v65_B 187 NLD 189 (386)
T ss_dssp BTT
T ss_pred eCC
Confidence 665
No 294
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=80.11 E-value=12 Score=25.84 Aligned_cols=80 Identities=11% Similarity=0.091 Sum_probs=48.0
Q ss_pred CeeEEEECCCCCeEEEE-eCCCeEEEEEcCCCce----eccCCCcEEEEEecCCcceeeeeeecccEEEEecCCCcEEEE
Q 036317 14 DANEVKLSNDGRLMLLT-TLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSVYAW 88 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~~-~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~~w 88 (106)
....++|++.++.|..+ ...+.|+.++...... ......+..+++.+.+. +..++-...+.|.+.
T Consensus 74 ~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g----------~ly~~d~~~~~I~~~ 143 (349)
T 3v64_C 74 NAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHD----------KLYWTDSGTSRIEVA 143 (349)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTT----------EEEEEETTTTEEEEE
T ss_pred ceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCC----------eEEEEcCCCCeEEEE
Confidence 46788888765555544 4667888888765543 11223445678887540 333444555677777
Q ss_pred ECCCCC----------CCcEEEeCC
Q 036317 89 SARSGK----------EPPVIKWAP 103 (106)
Q Consensus 89 d~~~~~----------~v~~i~~sp 103 (106)
+++... .++.++++|
T Consensus 144 ~~dG~~~~~l~~~~l~~P~~iavdp 168 (349)
T 3v64_C 144 NLDGAHRKVLLWQSLEKPRAIALHP 168 (349)
T ss_dssp ETTSCSCEEEECTTCSCEEEEEEET
T ss_pred cCCCCceEEEEeCCCCCcceEEEec
Confidence 776432 455666665
No 295
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=78.90 E-value=12 Score=25.18 Aligned_cols=67 Identities=7% Similarity=0.061 Sum_probs=43.0
Q ss_pred CCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCc-e------e------ccCCCcEEEEEecCCcceeeeeeecccEEEEe
Q 036317 13 SDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGT-L------P------VSHNSTLEASFSQHLSLVALSVLILRSWVLEG 79 (106)
Q Consensus 13 ~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~-~------~------~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~ 79 (106)
.....+++.++|.++++.-.++.+.++++.... . . ........++|+|++ +.+.++
T Consensus 70 ~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~-----------~~L~va 138 (255)
T 3qqz_A 70 KDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQD-----------HTFWFF 138 (255)
T ss_dssp SSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTT-----------TEEEEE
T ss_pred CChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCC-----------CEEEEE
Confidence 467788999999876665567788888765432 1 1 012234679999998 666666
Q ss_pred cCCCcEEEEEC
Q 036317 80 SGDGSVYAWSA 90 (106)
Q Consensus 80 s~d~~i~~wd~ 90 (106)
.+.....+|.+
T Consensus 139 ~E~~p~~i~~~ 149 (255)
T 3qqz_A 139 KEKNPIEVYKV 149 (255)
T ss_dssp EESSSEEEEEE
T ss_pred ECcCCceEEEE
Confidence 55544444444
No 296
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=76.64 E-value=23 Score=27.06 Aligned_cols=69 Identities=17% Similarity=0.126 Sum_probs=43.3
Q ss_pred CCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCceec-------cCCCcEEEEEecCCcceeeeeeecccEEEEecCCCcE
Q 036317 13 SDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTLPV-------SHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSV 85 (106)
Q Consensus 13 ~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~~~-------~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i 85 (106)
..|.++..+++|+..+ ++.++-+..+|..+++... ....+.++...++| +..++.. +|-+
T Consensus 495 ~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g-----------~lWi~T~-~Glv 561 (781)
T 3v9f_A 495 NFVRSIAQDSEGRFWI-GTFGGGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKG-----------QMWLATG-EGLV 561 (781)
T ss_dssp SCEEEEEECTTCCEEE-EESSSCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTS-----------CEEEEET-TEEE
T ss_pred ceeEEEEEcCCCCEEE-EEcCCCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCC-----------CEEEEEC-CCce
Confidence 4789999999999554 4544447778887766511 12345567777788 5444433 5544
Q ss_pred EEEECCCCC
Q 036317 86 YAWSARSGK 94 (106)
Q Consensus 86 ~~wd~~~~~ 94 (106)
..||.++++
T Consensus 562 ~~~d~~~~~ 570 (781)
T 3v9f_A 562 CFPSARNFD 570 (781)
T ss_dssp EESCTTTCC
T ss_pred EEECCCCCc
Confidence 667666554
No 297
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=76.49 E-value=5.5 Score=28.25 Aligned_cols=44 Identities=14% Similarity=0.129 Sum_probs=32.3
Q ss_pred CCcEEEEEecCCcceeeeeeecccEEEEecCCCcEEEEECCCCC----------------CCcEEEeCCCC
Q 036317 51 NSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSVYAWSARSGK----------------EPPVIKWAPGS 105 (106)
Q Consensus 51 ~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~~wd~~~~~----------------~v~~i~~sp~~ 105 (106)
..+..++|.||| +.+++-...|.|++++..+++ ....|+++|+|
T Consensus 32 ~~P~~ia~~pdG-----------~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf 91 (347)
T 3das_A 32 NSPWGLAPLPGG-----------DLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDY 91 (347)
T ss_dssp SSEEEEEECTTS-----------CEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTH
T ss_pred CCceEEEEcCCC-----------cEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEecccc
Confidence 345779999999 877777658888888766554 23568888864
No 298
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=76.41 E-value=15 Score=24.87 Aligned_cols=49 Identities=4% Similarity=-0.074 Sum_probs=32.3
Q ss_pred CeeEEEECCCCCeEE-EEeCCCeEEEEEcCCCce----eccCCCcEEEEEecCC
Q 036317 14 DANEVKLSNDGRLML-LTTLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHL 62 (106)
Q Consensus 14 ~v~~v~~spdg~~l~-~~~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~ 62 (106)
....+++++.+..+. +-..++.|.++|...... ......+..++++|++
T Consensus 78 ~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~ 131 (316)
T 1ijq_A 78 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVH 131 (316)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTT
T ss_pred CcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCC
Confidence 567889987555454 446778899988754333 2223456778899866
No 299
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=72.80 E-value=4.5 Score=32.94 Aligned_cols=33 Identities=9% Similarity=0.114 Sum_probs=28.8
Q ss_pred CeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce
Q 036317 14 DANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL 46 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~ 46 (106)
.+.++...++..++.+.+.|+++++||+.+++.
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~ 271 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQC 271 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCe
Confidence 566677778999999999999999999999875
No 300
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=72.65 E-value=20 Score=24.52 Aligned_cols=79 Identities=5% Similarity=-0.086 Sum_probs=45.5
Q ss_pred CeeEEEECCCCCeE-EEEeCCCeEEEEEcCCCce----eccCCCcEEEEEecCCcceeeeeeecccEEEEec--CCCcEE
Q 036317 14 DANEVKLSNDGRLM-LLTTLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGS--GDGSVY 86 (106)
Q Consensus 14 ~v~~v~~spdg~~l-~~~~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s--~d~~i~ 86 (106)
....+++++.+..+ .+-...+.|.+++...... ......+..+++.|.+ .+|.-.. ..+.|+
T Consensus 80 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~-----------g~ly~td~~~~~~I~ 148 (318)
T 3sov_A 80 SPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSS-----------GFMYWTDWGEVPKIE 148 (318)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGG-----------TEEEEEECSSSCEEE
T ss_pred CccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCC-----------CEEEEEecCCCCEEE
Confidence 45578888755444 4445667888888754332 1233455678888875 4333332 245666
Q ss_pred EEECCCCC----------CCcEEEeCC
Q 036317 87 AWSARSGK----------EPPVIKWAP 103 (106)
Q Consensus 87 ~wd~~~~~----------~v~~i~~sp 103 (106)
..++.... ..+.|+++|
T Consensus 149 r~~~dG~~~~~~~~~~l~~Pnglavd~ 175 (318)
T 3sov_A 149 RAGMDGSSRFIIINSEIYWPNGLTLDY 175 (318)
T ss_dssp EEETTSCSCEEEECSSCSCEEEEEEET
T ss_pred EEEcCCCCeEEEEECCCCCccEEEEec
Confidence 66664211 456677765
No 301
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=72.56 E-value=3.7 Score=32.28 Aligned_cols=27 Identities=7% Similarity=0.043 Sum_probs=22.8
Q ss_pred cEEEEecCCCcEEEEECCCCCCCcEEE
Q 036317 74 SWVLEGSGDGSVYAWSARSGKEPPVIK 100 (106)
Q Consensus 74 ~~i~t~s~d~~i~~wd~~~~~~v~~i~ 100 (106)
.++++-+.|.++|+|++++++.+....
T Consensus 232 ~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 232 RYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp TEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred cEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 899999999999999999998444433
No 302
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=70.38 E-value=34 Score=26.15 Aligned_cols=68 Identities=12% Similarity=0.084 Sum_probs=43.0
Q ss_pred CCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce---ec-c-----CCCcEEEEEecCCcceeeeeeecccEEEEecCC
Q 036317 12 VSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL---PV-S-----HNSTLEASFSQHLSLVALSVLILRSWVLEGSGD 82 (106)
Q Consensus 12 ~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~---~~-~-----~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d 82 (106)
...|.++..+++|+..+ ++. +.+..+|..+++. .. . ...+..+...++| +..++...+
T Consensus 449 ~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g-----------~lWigt~~~ 515 (781)
T 3v9f_A 449 LLDVRVFYEDKNKKIWI-GTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEG-----------RFWIGTFGG 515 (781)
T ss_dssp CCCEEEEEECTTSEEEE-EET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTC-----------CEEEEESSS
T ss_pred CCeEEEEEECCCCCEEE-EEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCC-----------CEEEEEcCC
Confidence 34789999999998544 444 5688899887765 11 1 2345567777888 544443323
Q ss_pred CcEEEEECCCC
Q 036317 83 GSVYAWSARSG 93 (106)
Q Consensus 83 ~~i~~wd~~~~ 93 (106)
| +..+|.+++
T Consensus 516 G-l~~~~~~~~ 525 (781)
T 3v9f_A 516 G-VGIYTPDMQ 525 (781)
T ss_dssp C-EEEECTTCC
T ss_pred C-EEEEeCCCC
Confidence 3 666766544
No 303
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=68.12 E-value=29 Score=24.50 Aligned_cols=80 Identities=5% Similarity=-0.094 Sum_probs=46.6
Q ss_pred CeeEEEECCCCCeE-EEEeCCCeEEEEEcCCCce----eccCCCcEEEEEecCCcceeeeeeecccEEEEec--CCCcEE
Q 036317 14 DANEVKLSNDGRLM-LLTTLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGS--GDGSVY 86 (106)
Q Consensus 14 ~v~~v~~spdg~~l-~~~~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s--~d~~i~ 86 (106)
....+++++.++.| .+-...+.|.+.+...... ......+..++++|.+ .+|.-.. ..+.|.
T Consensus 160 ~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~-----------g~ly~td~~~~~~I~ 228 (400)
T 3p5b_L 160 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVH-----------GFMYWTDWGTPAKIK 228 (400)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTT-----------TEEEEEECSSSCCEE
T ss_pred CcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEeccc-----------CeEEEEeCCCCCEEE
Confidence 56788888754444 4445678888888765433 2233346778899866 3333322 235666
Q ss_pred EEECCCCC----------CCcEEEeCCC
Q 036317 87 AWSARSGK----------EPPVIKWAPG 104 (106)
Q Consensus 87 ~wd~~~~~----------~v~~i~~sp~ 104 (106)
..++.... .++.|+++|.
T Consensus 229 ~~~~dG~~~~~~~~~~l~~P~glavd~~ 256 (400)
T 3p5b_L 229 KGGLNGVDIYSLVTENIQWPNGITLDLL 256 (400)
T ss_dssp EEETTSCSCEEEECSSCSCEEEEEEETT
T ss_pred EEeCCCCccEEEEECCCCceEEEEEEeC
Confidence 66665322 4566666653
No 304
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=67.35 E-value=5.6 Score=28.14 Aligned_cols=59 Identities=19% Similarity=0.396 Sum_probs=36.7
Q ss_pred CeEEEEeCCCeEEEEEcCCCce--e--cc-CCCcEEEE---EecCCcceeeeeeecccEEEE-ecCCCcEEEEECCCCC
Q 036317 25 RLMLLTTLEGHIHVLHSFQGTL--P--VS-HNSTLEAS---FSQHLSLVALSVLILRSWVLE-GSGDGSVYAWSARSGK 94 (106)
Q Consensus 25 ~~l~~~~~~~~i~l~d~~~~~~--~--~~-~~~~~~~~---fs~d~~~~~~~~~~~~~~i~t-~s~d~~i~~wd~~~~~ 94 (106)
..+++++.||.++-+|..+|+. . .. ..++.... ...++ ..++. ...||.++.++.++|.
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~-----------~~~vv~p~~dG~l~a~~~~~G~ 78 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETY-----------ETLIIEPFGDGNIYYFNAHQGL 78 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSS-----------EEEEECCSTTTEEEEEETTTEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCC-----------cEEEEEECCCCEEEEEECCCCc
Confidence 3588889999999999999987 2 11 12222210 00122 33322 2689999999988875
No 305
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=67.00 E-value=27 Score=23.83 Aligned_cols=71 Identities=11% Similarity=0.012 Sum_probs=45.5
Q ss_pred CeeEEEECCCCCeEEEE-eCCCeEEEEEcCCCce----eccCCCcEEEEEecCCcceeeeeeecccEEEEecCCCcEEEE
Q 036317 14 DANEVKLSNDGRLMLLT-TLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSVYAW 88 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~~-~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~~w 88 (106)
.-+.++++|+++.|..+ +..+.|..+|...... ......+..+++..+ ....+-...+.|..+
T Consensus 167 ~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~~------------~lywtd~~~~~V~~~ 234 (318)
T 3sov_A 167 WPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED------------ILYWTDWSTHSILAC 234 (318)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEETT------------EEEEEETTTTEEEEE
T ss_pred CccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeCC------------EEEEEecCCCeEEEE
Confidence 45789999976666554 5668888888753222 112334455666533 444555667889999
Q ss_pred ECCCCCCC
Q 036317 89 SARSGKEP 96 (106)
Q Consensus 89 d~~~~~~v 96 (106)
+..+|+.+
T Consensus 235 ~~~~G~~~ 242 (318)
T 3sov_A 235 NKYTGEGL 242 (318)
T ss_dssp ETTTCCSC
T ss_pred ECCCCCce
Confidence 99888733
No 306
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=66.49 E-value=34 Score=24.67 Aligned_cols=39 Identities=10% Similarity=0.030 Sum_probs=26.9
Q ss_pred CcEEEEEecCCcceeeeeeecccEEEEecCCCcEEEEECCCCCCCcEEEe
Q 036317 52 STLEASFSQHLSLVALSVLILRSWVLEGSGDGSVYAWSARSGKEPPVIKW 101 (106)
Q Consensus 52 ~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~~wd~~~~~~v~~i~~ 101 (106)
.+.++..|+.. ..|.--..-|.++++|+++|..+-.-+.
T Consensus 261 FPVamqvs~ky-----------gviyviTK~G~ihlyDleTgt~i~~nrI 299 (365)
T 2xzh_A 261 FPVAMQISEKH-----------DVVFLITKYGYIHLYDLETGTCIYMNRI 299 (365)
T ss_dssp CEEEEEEETTT-----------TEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred ceEEEEecccC-----------CEEEEEeCCcEEEEEEcccCcEEEEecc
Confidence 34556666666 6666666779999999999984433333
No 307
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=65.22 E-value=29 Score=23.44 Aligned_cols=74 Identities=7% Similarity=-0.004 Sum_probs=47.6
Q ss_pred CeeEEEECCCCCeEEEE-eCCCeEEEEEcCCCce----ec--cCCCcEEEEEecCCcceeeeeeecccEEEEecCCCcEE
Q 036317 14 DANEVKLSNDGRLMLLT-TLEGHIHVLHSFQGTL----PV--SHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSVY 86 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~~-~~~~~i~l~d~~~~~~----~~--~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~ 86 (106)
..+.++++|+++.|..+ ...+.|..+|...... .. ....+..+++. .+ ...++-..++.|.
T Consensus 165 ~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~-----------~ly~~d~~~~~V~ 232 (316)
T 1ijq_A 165 WPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-ED-----------KVFWTDIINEAIF 232 (316)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TT-----------EEEEEETTTTEEE
T ss_pred CceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE-CC-----------EEEEEECCCCeEE
Confidence 56789999887766555 4667899999754322 11 12334556665 34 5555666778899
Q ss_pred EEECCCCCCCcEE
Q 036317 87 AWSARSGKEPPVI 99 (106)
Q Consensus 87 ~wd~~~~~~v~~i 99 (106)
.++..+|+.+..+
T Consensus 233 ~~~~~~g~~~~~i 245 (316)
T 1ijq_A 233 SANRLTGSDVNLL 245 (316)
T ss_dssp EEETTTCCCCEEE
T ss_pred EEeCCCCcceEEE
Confidence 9998888744433
No 308
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=65.21 E-value=9.2 Score=29.42 Aligned_cols=49 Identities=4% Similarity=-0.084 Sum_probs=28.6
Q ss_pred CeeEEEECCCCCeE-EEEeCCCeEEEEEcCCCce----eccCCCcEEEEEecCC
Q 036317 14 DANEVKLSNDGRLM-LLTTLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHL 62 (106)
Q Consensus 14 ~v~~v~~spdg~~l-~~~~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~ 62 (106)
....+++++.+..| ++-...+.|.+++...... ......+..++++|++
T Consensus 454 ~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~ 507 (699)
T 1n7d_A 454 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVH 507 (699)
T ss_dssp -CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSS
T ss_pred CcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCC
Confidence 34578888654444 4445667888888765443 1122334567888866
No 309
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=65.14 E-value=23 Score=23.40 Aligned_cols=61 Identities=11% Similarity=0.095 Sum_probs=34.3
Q ss_pred CCCeEEEEeCC-----CeEEEEEcCCCcee----ccCCCcEEEEEecCCcceeeeeeecccEEEEecCC-----CcEEEE
Q 036317 23 DGRLMLLTTLE-----GHIHVLHSFQGTLP----VSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGD-----GSVYAW 88 (106)
Q Consensus 23 dg~~l~~~~~~-----~~i~l~d~~~~~~~----~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d-----~~i~~w 88 (106)
+++.++.++.+ +.+.++|..+.+-. .............++ +.++.|+.+ ..+.+|
T Consensus 204 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~-----------~i~v~GG~~~~~~~~~v~~y 272 (302)
T 2xn4_A 204 NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAVNG-----------LLYVVGGDDGSCNLASVEYY 272 (302)
T ss_dssp TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETT-----------EEEEECCBCSSSBCCCEEEE
T ss_pred CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEECC-----------EEEEECCcCCCcccccEEEE
Confidence 55655666543 46888888777651 111111111222366 666666554 358999
Q ss_pred ECCCCC
Q 036317 89 SARSGK 94 (106)
Q Consensus 89 d~~~~~ 94 (106)
|+++.+
T Consensus 273 d~~~~~ 278 (302)
T 2xn4_A 273 NPTTDK 278 (302)
T ss_dssp ETTTTE
T ss_pred cCCCCe
Confidence 998876
No 310
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=65.06 E-value=35 Score=24.37 Aligned_cols=71 Identities=11% Similarity=0.193 Sum_probs=48.4
Q ss_pred CCeeEEEECCCCCeEEEEeCCCeEEEEEcC-----CCce--ecc----CCCcEEEEE--ecCCcceeeeeeeccc-EEEE
Q 036317 13 SDANEVKLSNDGRLMLLTTLEGHIHVLHSF-----QGTL--PVS----HNSTLEASF--SQHLSLVALSVLILRS-WVLE 78 (106)
Q Consensus 13 ~~v~~v~~spdg~~l~~~~~~~~i~l~d~~-----~~~~--~~~----~~~~~~~~f--s~d~~~~~~~~~~~~~-~i~t 78 (106)
+.+..+..++....|.++-.+..|..+|+. ++++ ... ...+..+++ .+++ + +++.
T Consensus 180 sq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g-----------~gyLiv 248 (355)
T 3amr_A 180 SQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADG-----------KGYLMA 248 (355)
T ss_dssp SCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGG-----------CEEEEE
T ss_pred CCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCC-----------CEEEEE
Confidence 478899999988889999998888888865 2333 111 123445555 5666 5 6666
Q ss_pred ec-CCCcEEEEECC-CCC
Q 036317 79 GS-GDGSVYAWSAR-SGK 94 (106)
Q Consensus 79 ~s-~d~~i~~wd~~-~~~ 94 (106)
++ .+.+..+||.+ +.+
T Consensus 249 SsQG~~s~~Vydr~~~~~ 266 (355)
T 3amr_A 249 SSQGNSSYAIYDRQGKNK 266 (355)
T ss_dssp EEGGGTEEEEEESSTTCC
T ss_pred EcCCCCEEEEEECCCCCc
Confidence 65 56699999997 444
No 311
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=64.81 E-value=19 Score=23.77 Aligned_cols=61 Identities=3% Similarity=0.030 Sum_probs=34.8
Q ss_pred CCCeEEEEeCC-----CeEEEEEcCCCcee----ccCCCcEEEEEecCCcceeeeeeecccEEEEecCC-----CcEEEE
Q 036317 23 DGRLMLLTTLE-----GHIHVLHSFQGTLP----VSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGD-----GSVYAW 88 (106)
Q Consensus 23 dg~~l~~~~~~-----~~i~l~d~~~~~~~----~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d-----~~i~~w 88 (106)
+++.++.++.+ ..+.++|..+.+-. .........+...++ +.++.|+.+ ..+.++
T Consensus 206 ~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~-----------~i~v~GG~~~~~~~~~v~~y 274 (301)
T 2vpj_A 206 NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVLRG-----------RLYAIAGYDGNSLLSSIECY 274 (301)
T ss_dssp TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETT-----------EEEEECCBCSSSBEEEEEEE
T ss_pred CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEECC-----------EEEEEcCcCCCcccccEEEE
Confidence 45555666543 56888998877651 111111112223366 666666554 468899
Q ss_pred ECCCCC
Q 036317 89 SARSGK 94 (106)
Q Consensus 89 d~~~~~ 94 (106)
|+++.+
T Consensus 275 d~~~~~ 280 (301)
T 2vpj_A 275 DPIIDS 280 (301)
T ss_dssp ETTTTE
T ss_pred cCCCCe
Confidence 998876
No 312
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=63.79 E-value=24 Score=25.64 Aligned_cols=32 Identities=13% Similarity=0.132 Sum_probs=22.6
Q ss_pred CcEEEEEecCCcceeeeeeecccEEEEecCCCcEEEEECCCCC
Q 036317 52 STLEASFSQHLSLVALSVLILRSWVLEGSGDGSVYAWSARSGK 94 (106)
Q Consensus 52 ~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~~wd~~~~~ 94 (106)
....++|.||| +.+++-...+.|++++..+|+
T Consensus 28 ~P~~~a~~pdG-----------~l~V~e~~gg~I~~~~~~~g~ 59 (454)
T 1cru_A 28 KPHALLWGPDN-----------QIWLTERATGKILRVNPESGS 59 (454)
T ss_dssp SEEEEEECTTS-----------CEEEEETTTCEEEEECTTTCC
T ss_pred CceEEEEcCCC-----------cEEEEEcCCCEEEEEECCCCc
Confidence 45679999999 776666554567777765554
No 313
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=63.29 E-value=36 Score=23.82 Aligned_cols=69 Identities=13% Similarity=-0.001 Sum_probs=44.0
Q ss_pred CeeEEEECCCCCeEEEE-eCCCeEEEEEcCCCce----eccCCCcEEEEEecCCcceeeeeeecccEEEEecCCCcEEEE
Q 036317 14 DANEVKLSNDGRLMLLT-TLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSVYAW 88 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~~-~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~~w 88 (106)
..+.++++|+++.|..+ ...+.|..+|...... ......+..+++. .+ ...++-..++.|..+
T Consensus 247 ~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav~-~~-----------~ly~td~~~~~V~~~ 314 (386)
T 3v65_B 247 WPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF-ED-----------SLYWTDWHTKSINSA 314 (386)
T ss_dssp CEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEEE-TT-----------EEEEEETTTTEEEEE
T ss_pred CeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEEE-CC-----------EEEEeeCCCCeEEEE
Confidence 46789999876666554 5667888888653322 1122344556663 34 455566677789998
Q ss_pred ECCCCC
Q 036317 89 SARSGK 94 (106)
Q Consensus 89 d~~~~~ 94 (106)
+..+|+
T Consensus 315 ~~~~G~ 320 (386)
T 3v65_B 315 NKFTGK 320 (386)
T ss_dssp ETTTCC
T ss_pred ECCCCc
Confidence 877776
No 314
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=62.41 E-value=20 Score=27.60 Aligned_cols=69 Identities=7% Similarity=0.013 Sum_probs=41.4
Q ss_pred CeeEEEECCCCCeEEEE-eCCCeEEEEEcCCCce--ec----cCCCcEEEEEecCCcceeeeeeecccEEEEecCCCcEE
Q 036317 14 DANEVKLSNDGRLMLLT-TLEGHIHVLHSFQGTL--PV----SHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSVY 86 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~~-~~~~~i~l~d~~~~~~--~~----~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~ 86 (106)
..+.|+|+|+++.|..+ ...+.|..+|...... .. ....+..+++..+ ..+++-...+.|.
T Consensus 541 ~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~------------~lywtd~~~~~V~ 608 (699)
T 1n7d_A 541 WPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED------------KVFWTDIINEAIF 608 (699)
T ss_dssp SCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT------------EEEEECSTTTCEE
T ss_pred CccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC------------EEEEEeCCCCeEE
Confidence 45689999986656544 5667899888754322 11 1122233444433 3444556677899
Q ss_pred EEECCCCC
Q 036317 87 AWSARSGK 94 (106)
Q Consensus 87 ~wd~~~~~ 94 (106)
.++..+|+
T Consensus 609 ~~d~~~G~ 616 (699)
T 1n7d_A 609 SANRLTGS 616 (699)
T ss_dssp EEETTTEE
T ss_pred EEEccCCC
Confidence 99987765
No 315
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=60.64 E-value=15 Score=28.84 Aligned_cols=25 Identities=20% Similarity=0.222 Sum_probs=22.5
Q ss_pred CCCCeEEEEeCCCeEEEEEcCCCce
Q 036317 22 NDGRLMLLTTLEGHIHVLHSFQGTL 46 (106)
Q Consensus 22 pdg~~l~~~~~~~~i~l~d~~~~~~ 46 (106)
.+..++++-+.|+++++||+.+++.
T Consensus 229 ~~~~fLftL~~Dh~LRiWsL~t~~l 253 (729)
T 3f7f_A 229 FHERYLIVLTQNCHLKIWDLTSFTL 253 (729)
T ss_dssp ETTTEEEEEETTCEEEEEETTTTEE
T ss_pred cCCcEEEEEEcCCeEEEEEcCCCce
Confidence 4578999999999999999999986
No 316
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=59.54 E-value=33 Score=22.63 Aligned_cols=62 Identities=8% Similarity=0.053 Sum_probs=35.2
Q ss_pred CCCCeEEEEeCC----CeEEEEEcCCCce----eccCCCcEEEEEecCCcceeeeeeecccEEEEecCC------CcEEE
Q 036317 22 NDGRLMLLTTLE----GHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGD------GSVYA 87 (106)
Q Consensus 22 pdg~~l~~~~~~----~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d------~~i~~ 87 (106)
-+++.++.++.+ ..+.++|..+.+. ..........+...++ +.++.|+.+ ..+.+
T Consensus 54 ~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~-----------~iyv~GG~~~~~~~~~~~~~ 122 (306)
T 3ii7_A 54 WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAAEG-----------KIYTSGGSEVGNSALYLFEC 122 (306)
T ss_dssp ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEETT-----------EEEEECCBBTTBSCCCCEEE
T ss_pred ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEECC-----------EEEEECCCCCCCcEeeeEEE
Confidence 356666666644 6788889887764 1111111112223366 665666544 46889
Q ss_pred EECCCCC
Q 036317 88 WSARSGK 94 (106)
Q Consensus 88 wd~~~~~ 94 (106)
+|.++.+
T Consensus 123 ~d~~~~~ 129 (306)
T 3ii7_A 123 YDTRTES 129 (306)
T ss_dssp EETTTTE
T ss_pred EeCCCCc
Confidence 9988765
No 317
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=59.52 E-value=47 Score=23.95 Aligned_cols=33 Identities=24% Similarity=0.265 Sum_probs=27.7
Q ss_pred CeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce
Q 036317 14 DANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL 46 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~ 46 (106)
---++..|+.-..+...+.-|.+|++|+++|..
T Consensus 261 FPVamqvs~kygviyviTK~G~ihlyDleTgt~ 293 (365)
T 2xzh_A 261 FPVAMQISEKHDVVFLITKYGYIHLYDLETGTC 293 (365)
T ss_dssp CEEEEEEETTTTEEEEEETTSEEEEEETTTCCE
T ss_pred ceEEEEecccCCEEEEEeCCcEEEEEEcccCcE
Confidence 445677777777788899999999999999988
No 318
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=58.96 E-value=64 Score=25.36 Aligned_cols=81 Identities=11% Similarity=-0.008 Sum_probs=45.0
Q ss_pred CCeeEEEECCCCCeEE-EEeCCCeEEEEEcCCC----ce----eccCCCcEEEEEecCCcceeeeeeecccEE-EEecCC
Q 036317 13 SDANEVKLSNDGRLML-LTTLEGHIHVLHSFQG----TL----PVSHNSTLEASFSQHLSLVALSVLILRSWV-LEGSGD 82 (106)
Q Consensus 13 ~~v~~v~~spdg~~l~-~~~~~~~i~l~d~~~~----~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i-~t~s~d 82 (106)
..+..++|++.+..|. +-...+.|+.+++... .. ......+..+++.+.+ +.| ++-...
T Consensus 424 ~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~-----------~~LY~tD~~~ 492 (791)
T 3m0c_C 424 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH-----------SNIYWTDSVL 492 (791)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTT-----------TEEEEEETTT
T ss_pred CceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecC-----------CcEEEEecCC
Confidence 3567888888555454 4445677877776532 11 1122344567777665 333 344456
Q ss_pred CcEEEEECCCCC----------CCcEEEeCCC
Q 036317 83 GSVYAWSARSGK----------EPPVIKWAPG 104 (106)
Q Consensus 83 ~~i~~wd~~~~~----------~v~~i~~sp~ 104 (106)
+.|.+.++.... .++.|+++|.
T Consensus 493 ~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~ 524 (791)
T 3m0c_C 493 GTVSVADTKGVKRKTLFRENGSKPRAIVVDPV 524 (791)
T ss_dssp TEEEEEETTSSSEEEEEECTTCCEEEEEEETT
T ss_pred CeEEEEeCCCCeEEEEEeCCCCCcceEEEecC
Confidence 678887776432 4566676664
No 319
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=58.40 E-value=47 Score=23.68 Aligned_cols=68 Identities=16% Similarity=0.264 Sum_probs=46.3
Q ss_pred CCeeEEEE--CCC-CC-eEEEEeCCCeEEEEEcC---CCce------ec-cCCCcEEEEEecCCcceeeeeeecccEEEE
Q 036317 13 SDANEVKL--SND-GR-LMLLTTLEGHIHVLHSF---QGTL------PV-SHNSTLEASFSQHLSLVALSVLILRSWVLE 78 (106)
Q Consensus 13 ~~v~~v~~--spd-g~-~l~~~~~~~~i~l~d~~---~~~~------~~-~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t 78 (106)
..+..+++ +|. |+ ++++...++.+..|++. .++. .. -.+.+..|...+.. .+|..
T Consensus 128 ~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~-----------g~Lyv 196 (355)
T 3amr_A 128 NEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEY-----------GRLYI 196 (355)
T ss_dssp SSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTT-----------TEEEE
T ss_pred CCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCC-----------CeEEE
Confidence 35667788 774 54 67788888999888873 3333 11 12345578999888 89999
Q ss_pred ecCCCcEEEEECC
Q 036317 79 GSGDGSVYAWSAR 91 (106)
Q Consensus 79 ~s~d~~i~~wd~~ 91 (106)
+-++.-|..++.+
T Consensus 197 ~eEd~GIw~~da~ 209 (355)
T 3amr_A 197 AEEDEAIWKFSAE 209 (355)
T ss_dssp EETTTEEEEEECS
T ss_pred ecccceEEEEeCC
Confidence 9888666666644
No 320
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=55.41 E-value=65 Score=24.34 Aligned_cols=81 Identities=14% Similarity=0.016 Sum_probs=48.2
Q ss_pred CeeEEEECCCCCeEEEE-eCCCeEEEEEcCCCc--e---eccCCCcEEEEEecCCcceeeeeeecccEEEEecCCCcEEE
Q 036317 14 DANEVKLSNDGRLMLLT-TLEGHIHVLHSFQGT--L---PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSVYA 87 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~~-~~~~~i~l~d~~~~~--~---~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~~ 87 (106)
....++|++.+..+..+ ...+.|..++..... . ......+..+++.+.+ ++..++-...+.|.+
T Consensus 41 ~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~----------~~ly~~d~~~~~I~v 110 (619)
T 3s94_A 41 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLG----------EKLYWTDSETNRIEV 110 (619)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTT----------TEEEEEETTTTEEEE
T ss_pred ceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecC----------CEEEEEeCCCCEEEE
Confidence 56788999876666654 456778877765432 1 1122456678888855 034445555678888
Q ss_pred EECCCCC----------CCcEEEeCCC
Q 036317 88 WSARSGK----------EPPVIKWAPG 104 (106)
Q Consensus 88 wd~~~~~----------~v~~i~~sp~ 104 (106)
.++.... .++.|+++|.
T Consensus 111 ~~~dG~~~~~l~~~~l~~P~~Iavdp~ 137 (619)
T 3s94_A 111 SNLDGSLRKVLFWQELDQPRAIALDPS 137 (619)
T ss_dssp EETTSCSCEEEECSSCSCCCCEEEETT
T ss_pred EECCCCCEEEEEeCCCCCCceEEEecC
Confidence 8776432 4566666653
No 321
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=51.60 E-value=44 Score=22.80 Aligned_cols=64 Identities=8% Similarity=0.059 Sum_probs=36.6
Q ss_pred EEEECCCCCeEEEEe----CCCeEEEEEcCCCce-eccCCCcEEEEEecCCcceeeeeeecccEEEEecC-CCcEEEEEC
Q 036317 17 EVKLSNDGRLMLLTT----LEGHIHVLHSFQGTL-PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSG-DGSVYAWSA 90 (106)
Q Consensus 17 ~v~~spdg~~l~~~~----~~~~i~l~d~~~~~~-~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~-d~~i~~wd~ 90 (106)
...|+++|++++-+. .+..|...++..... ....... ..+++++ +.|.-.+. ..+|+.-++
T Consensus 108 ~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~--~~~~~~g-----------~~iy~t~~g~~~Iy~~~l 174 (302)
T 3s25_A 108 CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL--FTCNTSD-----------RYFYYNNPKNGQLYRYDT 174 (302)
T ss_dssp EEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC--CCSEEET-----------TEEEEECTTTCCEEEEET
T ss_pred ccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc--eEeeEEC-----------CEEEEEeCCCceEEEEEC
Confidence 447888999888665 345666666653332 1111111 3467888 66664443 457777776
Q ss_pred CCC
Q 036317 91 RSG 93 (106)
Q Consensus 91 ~~~ 93 (106)
..+
T Consensus 175 ~g~ 177 (302)
T 3s25_A 175 ASQ 177 (302)
T ss_dssp TTT
T ss_pred CCC
Confidence 544
No 322
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=50.66 E-value=55 Score=22.12 Aligned_cols=64 Identities=9% Similarity=0.063 Sum_probs=36.5
Q ss_pred CCCeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce-----eccCCCcEEEEEecCCcceeeeeeecccEEEEecCCCcEE
Q 036317 12 VSDANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL-----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSVY 86 (106)
Q Consensus 12 ~~~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~-----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~ 86 (106)
...+..+.++|++++++.+. ++.+..-+-..++. ......+..+.+++++ +.++.+ .+|.++
T Consensus 162 ~~~~~~~~~~~~~~~~~~g~-~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g-----------~~~~~~-~~G~~~ 228 (327)
T 2xbg_A 162 IGVMRNLNRSPSGEYVAVSS-RGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDG-----------RLWMIV-NGGKIA 228 (327)
T ss_dssp CCCEEEEEECTTSCEEEEET-TSSEEEEECTTCSSCEEEECCSSSCEEEEEECTTS-----------CEEEEE-TTTEEE
T ss_pred CcceEEEEEcCCCcEEEEEC-CCcEEEEeCCCCCceeECCCCCCCccceeEECCCC-----------CEEEEe-CCceEE
Confidence 34688999999998766554 44444322111222 1123345667888888 655444 355555
Q ss_pred EE
Q 036317 87 AW 88 (106)
Q Consensus 87 ~w 88 (106)
+.
T Consensus 229 ~s 230 (327)
T 2xbg_A 229 FS 230 (327)
T ss_dssp EE
T ss_pred Ee
Confidence 55
No 323
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=49.04 E-value=84 Score=23.74 Aligned_cols=81 Identities=11% Similarity=-0.017 Sum_probs=46.1
Q ss_pred CeeEEEECCCCCeEEEE-eCCCeEEEEEcCCCce----eccCCCcEEEEEecCCcceeeeeeecccEEEEecCCCcEEEE
Q 036317 14 DANEVKLSNDGRLMLLT-TLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSVYAW 88 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~~-~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~~w 88 (106)
.+..++|++.+..+..+ ...+.|..++...... ......+..+++.+.+ ++..++-+..+.|.+.
T Consensus 350 ~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~----------~~lY~tD~~~~~I~v~ 419 (619)
T 3s94_A 350 HAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVA----------RNLYWTDTGTDRIEVT 419 (619)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTT----------TEEEEEETTTTEEEEE
T ss_pred ccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEeccc----------CcEEEEeCCCCcEEEE
Confidence 45678888755545444 4567777777654322 1122345567777644 0344444556677777
Q ss_pred ECCCCC----------CCcEEEeCCC
Q 036317 89 SARSGK----------EPPVIKWAPG 104 (106)
Q Consensus 89 d~~~~~----------~v~~i~~sp~ 104 (106)
++.... .++.|+++|.
T Consensus 420 ~~~G~~~~~l~~~~l~~P~~iavdp~ 445 (619)
T 3s94_A 420 RLNGTMRKILISEDLEEPRAIVLDPM 445 (619)
T ss_dssp ETTSCSCEEEECTTCCSEEEEEEETT
T ss_pred eCCCCeEEEEEECCCCCeeeEEEEcC
Confidence 776432 4566666664
No 324
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=48.11 E-value=99 Score=24.30 Aligned_cols=49 Identities=4% Similarity=-0.070 Sum_probs=32.5
Q ss_pred CeeEEEECCCCCeEEE-EeCCCeEEEEEcCCCce----eccCCCcEEEEEecCC
Q 036317 14 DANEVKLSNDGRLMLL-TTLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHL 62 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~-~~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~ 62 (106)
....|++++.++.|.. -...+.|.+.+...... ......+..++++|.+
T Consensus 472 ~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~ 525 (791)
T 3m0c_C 472 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVH 525 (791)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTT
T ss_pred CcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCC
Confidence 5678899887765554 45668888888754433 2233346778889875
No 325
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=47.99 E-value=35 Score=24.02 Aligned_cols=21 Identities=24% Similarity=0.272 Sum_probs=19.4
Q ss_pred cEEEEecCCCcEEEEECCCCC
Q 036317 74 SWVLEGSGDGSVYAWSARSGK 94 (106)
Q Consensus 74 ~~i~t~s~d~~i~~wd~~~~~ 94 (106)
..|.+|+.++.++..|+++|+
T Consensus 112 g~Vy~Gs~~g~l~ald~~tG~ 132 (339)
T 2be1_A 112 EKVYTGSMRTIMYTINMLNGE 132 (339)
T ss_dssp EEEEECEEEEEEEEEETTTCC
T ss_pred CEEEEEecCCEEEEEECCCCc
Confidence 678899999999999999998
No 326
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=47.82 E-value=86 Score=23.53 Aligned_cols=33 Identities=24% Similarity=0.265 Sum_probs=28.3
Q ss_pred CeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce
Q 036317 14 DANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL 46 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~ 46 (106)
--.++..|+.-..+...+.-|.++++|+++|..
T Consensus 260 FPvamqvs~kygviyviTK~G~i~lyDleTgt~ 292 (494)
T 1bpo_A 260 FPVAMQISEKHDVVFLITKYGYIHLYDLETGTC 292 (494)
T ss_dssp CEEEEEEETTTTEEEEEETTSEEEEEETTTCCE
T ss_pred ceeEEEecccCCEEEEEecCceEEEEeccccee
Confidence 445778888777888999999999999999987
No 327
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=47.56 E-value=70 Score=22.45 Aligned_cols=72 Identities=7% Similarity=-0.020 Sum_probs=45.6
Q ss_pred CeeEEEECCCCCeEEEE-eCCCeEEEEEcCCCce----ec--cCCCcEEEEEecCCcceeeeeeecccEEEEecCCCcEE
Q 036317 14 DANEVKLSNDGRLMLLT-TLEGHIHVLHSFQGTL----PV--SHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSVY 86 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~~-~~~~~i~l~d~~~~~~----~~--~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~ 86 (106)
..+.++++|+++.|..+ ...+.|..+|...... .. ....+..++... + ...++-...+.|.
T Consensus 247 ~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~-~-----------~lywtd~~~~~V~ 314 (400)
T 3p5b_L 247 WPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-D-----------KVFWTDIINEAIF 314 (400)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEET-T-----------EEEEEESSSCSEE
T ss_pred ceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeC-C-----------EEEEecCCCCeEE
Confidence 56789999887767655 4567888888754332 11 123344555532 3 4445556778999
Q ss_pred EEECCCCCCCc
Q 036317 87 AWSARSGKEPP 97 (106)
Q Consensus 87 ~wd~~~~~~v~ 97 (106)
.+|..+|+.+.
T Consensus 315 ~~~~~~G~~~~ 325 (400)
T 3p5b_L 315 SANRLTGSDVN 325 (400)
T ss_dssp EEESSSCCCCE
T ss_pred EEEcCCCCceE
Confidence 99988887333
No 328
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=47.20 E-value=63 Score=21.79 Aligned_cols=49 Identities=16% Similarity=-0.022 Sum_probs=31.6
Q ss_pred eEEEECCCCCeEEEEeCCCeEEEEEcCC-Cce-------e-ccC--CCcEEEEEecCCccee
Q 036317 16 NEVKLSNDGRLMLLTTLEGHIHVLHSFQ-GTL-------P-VSH--NSTLEASFSQHLSLVA 66 (106)
Q Consensus 16 ~~v~~spdg~~l~~~~~~~~i~l~d~~~-~~~-------~-~~~--~~~~~~~fs~d~~~~~ 66 (106)
..+-|+|+|.+.++ .|+.|+-++.-+ +.. . ... .....+.|+|+|.+-|
T Consensus 91 ~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lya 150 (236)
T 1tl2_A 91 QFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYA 150 (236)
T ss_dssp SEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEE
T ss_pred eEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEE
Confidence 68899999997777 558887777533 221 1 111 2345688999994443
No 329
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=46.79 E-value=60 Score=21.46 Aligned_cols=62 Identities=10% Similarity=0.052 Sum_probs=33.8
Q ss_pred CCCCeEEEEeC------CCeEEEEEcCCCce----eccCCCcEEEEEecCCcceeeeeeecccEEEEecCCC-----cEE
Q 036317 22 NDGRLMLLTTL------EGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDG-----SVY 86 (106)
Q Consensus 22 pdg~~l~~~~~------~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~-----~i~ 86 (106)
-+++.++.++. ...+.++|..+.+- +.........+...++ +.++.|+.++ .+.
T Consensus 147 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~-----------~iyv~GG~~~~~~~~~~~ 215 (315)
T 4asc_A 147 HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDG-----------RIIVAAGVTDTGLTSSAE 215 (315)
T ss_dssp ETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETT-----------EEEEEEEECSSSEEEEEE
T ss_pred ECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEECC-----------EEEEEeccCCCCccceEE
Confidence 45565666665 24678888877754 1111111112222366 5555554433 588
Q ss_pred EEECCCCC
Q 036317 87 AWSARSGK 94 (106)
Q Consensus 87 ~wd~~~~~ 94 (106)
++|+++.+
T Consensus 216 ~yd~~~~~ 223 (315)
T 4asc_A 216 VYSITDNK 223 (315)
T ss_dssp EEETTTTE
T ss_pred EEECCCCe
Confidence 88988775
No 330
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=46.33 E-value=37 Score=25.26 Aligned_cols=33 Identities=9% Similarity=0.173 Sum_probs=25.1
Q ss_pred eecCCCCCCeeEEEECCCCCeEEEEeCCCeEEE
Q 036317 6 FSDGGDVSDANEVKLSNDGRLMLLTTLEGHIHV 38 (106)
Q Consensus 6 ~~~~~~~~~v~~v~~spdg~~l~~~~~~~~i~l 38 (106)
+++.....+|..+.+++++++|.+++.++-++|
T Consensus 455 i~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 455 MTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp ECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 344333468899999999999999888876665
No 331
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=45.21 E-value=95 Score=23.30 Aligned_cols=52 Identities=13% Similarity=0.202 Sum_probs=35.0
Q ss_pred CeEEEEEcCCC---ce-----------e--ccCCCcEEEEEecCCcceeeeeeecccEEEEecCCCcEEEEECCCCCCC
Q 036317 34 GHIHVLHSFQG---TL-----------P--VSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSVYAWSARSGKEP 96 (106)
Q Consensus 34 ~~i~l~d~~~~---~~-----------~--~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~~wd~~~~~~v 96 (106)
+.+|+.++... .. + .....+.+...|+.. ..|.--..-|.++++|+++|..+
T Consensus 226 ~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~ky-----------gviyviTK~G~i~lyDleTgt~i 293 (494)
T 1bpo_A 226 GKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKH-----------DVVFLITKYGYIHLYDLETGTCI 293 (494)
T ss_dssp CEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTT-----------TEEEEEETTSEEEEEETTTCCEE
T ss_pred cEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccC-----------CEEEEEecCceEEEEecccceee
Confidence 78999987543 11 0 112345566777666 66666667899999999999833
No 332
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=45.11 E-value=73 Score=21.90 Aligned_cols=50 Identities=14% Similarity=0.064 Sum_probs=30.1
Q ss_pred CCeeEEEECCC---CCeEEEE-eCC-----CeEEEEEcCCCce----------e--c-cCCCcEEEEEecCC
Q 036317 13 SDANEVKLSND---GRLMLLT-TLE-----GHIHVLHSFQGTL----------P--V-SHNSTLEASFSQHL 62 (106)
Q Consensus 13 ~~v~~v~~spd---g~~l~~~-~~~-----~~i~l~d~~~~~~----------~--~-~~~~~~~~~fs~d~ 62 (106)
.....++|+|| +.++.++ ... +.|..++...+++ + . .......+.|+|||
T Consensus 75 ~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG 146 (352)
T 2ism_A 75 SGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDG 146 (352)
T ss_dssp CSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTS
T ss_pred CCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCC
Confidence 46889999998 5545444 322 5677777654321 1 1 11123468999999
No 333
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=43.89 E-value=72 Score=21.52 Aligned_cols=62 Identities=8% Similarity=-0.046 Sum_probs=37.3
Q ss_pred CeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce----ec---cCCCcEEEEEecCCcceeeeeeecccEEEEecCCCcEE
Q 036317 14 DANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL----PV---SHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSVY 86 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~----~~---~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~ 86 (106)
.+..+.+.++++.+++ +.++.+. +....|+- .. .......+.|..++ +.+ .++.+|.|.
T Consensus 251 ~~~~v~~~~~~~~~~~-g~~g~i~-~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~-----------~~~-~~G~~G~i~ 316 (327)
T 2xbg_A 251 GFLDLAYRTPNEVWLA-GGAGALL-CSQDGGQTWQQDVDVKKVPSNFYKILFFSPD-----------QGF-ILGQKGILL 316 (327)
T ss_dssp CEEEEEESSSSCEEEE-ESTTCEE-EESSTTSSCEECGGGTTSSSCCCEEEEEETT-----------EEE-EECSTTEEE
T ss_pred ceEEEEecCCCEEEEE-eCCCeEE-EeCCCCcccEEcCccCCCCCCeEEEEEECCC-----------ceE-EEcCCceEE
Confidence 5888999998885555 4566663 34333443 11 12345667887666 544 455677776
Q ss_pred EEE
Q 036317 87 AWS 89 (106)
Q Consensus 87 ~wd 89 (106)
-++
T Consensus 317 ~~~ 319 (327)
T 2xbg_A 317 RYV 319 (327)
T ss_dssp EEC
T ss_pred EEc
Confidence 665
No 334
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=43.56 E-value=68 Score=21.15 Aligned_cols=61 Identities=10% Similarity=0.046 Sum_probs=33.7
Q ss_pred CCCeEEEEeCC-----CeEEEEEcCCCcee----ccCCCcEEEEEecCCcceeeeeeecccEEEEecCC-----CcEEEE
Q 036317 23 DGRLMLLTTLE-----GHIHVLHSFQGTLP----VSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGD-----GSVYAW 88 (106)
Q Consensus 23 dg~~l~~~~~~-----~~i~l~d~~~~~~~----~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d-----~~i~~w 88 (106)
+++.++.++.+ ..+.++|..+.+-. .........+..-++ +.++.|+.+ ..+.++
T Consensus 168 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~-----------~iyv~GG~~~~~~~~~v~~y 236 (308)
T 1zgk_A 168 NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVLHN-----------CIYAAGGYDGQDQLNSVERY 236 (308)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETT-----------EEEEECCBCSSSBCCCEEEE
T ss_pred CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEECC-----------EEEEEeCCCCCCccceEEEE
Confidence 55655666543 45788888776641 111111111112266 666666543 468999
Q ss_pred ECCCCC
Q 036317 89 SARSGK 94 (106)
Q Consensus 89 d~~~~~ 94 (106)
|+++.+
T Consensus 237 d~~~~~ 242 (308)
T 1zgk_A 237 DVETET 242 (308)
T ss_dssp ETTTTE
T ss_pred eCCCCc
Confidence 998765
No 335
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=43.47 E-value=93 Score=22.68 Aligned_cols=49 Identities=18% Similarity=0.234 Sum_probs=33.8
Q ss_pred CCeeEEEECCCCC-eEEEEeCCCeEEEEEcCCCc---e----e--cc-------CCCcEEEEEecC
Q 036317 13 SDANEVKLSNDGR-LMLLTTLEGHIHVLHSFQGT---L----P--VS-------HNSTLEASFSQH 61 (106)
Q Consensus 13 ~~v~~v~~spdg~-~l~~~~~~~~i~l~d~~~~~---~----~--~~-------~~~~~~~~fs~d 61 (106)
..-..|+|.|||. .|+++...+.|++++..... . + .. ......++|+|+
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~ 79 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPN 79 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCC
Confidence 3567899999996 57778889999999753221 1 1 01 234567899987
No 336
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=42.94 E-value=13 Score=28.91 Aligned_cols=34 Identities=15% Similarity=0.119 Sum_probs=24.1
Q ss_pred EEE-EecCCcceeeeeeecccEEEEecCCCcEEEEECCCCC
Q 036317 55 EAS-FSQHLSLVALSVLILRSWVLEGSGDGSVYAWSARSGK 94 (106)
Q Consensus 55 ~~~-fs~d~~~~~~~~~~~~~~i~t~s~d~~i~~wd~~~~~ 94 (106)
.++ ++||+++++++...- |++-..++++|+++++
T Consensus 133 g~~~~~~~~~~~~~~ls~~------G~d~~~~~~~d~~t~~ 167 (711)
T 4hvt_A 133 GVSNCFQNPNRYLISMSFG------GKDEMFFREWDLEKKD 167 (711)
T ss_dssp EEEECSSSTTEEEEEEEET------TCSEEEEEEEETTTTE
T ss_pred ceeecCCCCCEEEEEeCCC------CCceeEEEEEECCcCC
Confidence 355 999996666554433 4455689999999987
No 337
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=41.43 E-value=75 Score=21.02 Aligned_cols=24 Identities=4% Similarity=0.224 Sum_probs=15.2
Q ss_pred CCCeEEEEeCC-----CeEEEEEcCCCce
Q 036317 23 DGRLMLLTTLE-----GHIHVLHSFQGTL 46 (106)
Q Consensus 23 dg~~l~~~~~~-----~~i~l~d~~~~~~ 46 (106)
+++.++.++.+ ..+.++|..+.+-
T Consensus 206 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 234 (318)
T 2woz_A 206 KGKIVIAGGVTEDGLSASVEAFDLKTNKW 234 (318)
T ss_dssp TTEEEEEEEEETTEEEEEEEEEETTTCCE
T ss_pred CCEEEEEcCcCCCCccceEEEEECCCCeE
Confidence 55656666533 3567888877765
No 338
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=41.41 E-value=1.1e+02 Score=23.08 Aligned_cols=81 Identities=9% Similarity=0.055 Sum_probs=48.2
Q ss_pred CeeEEEECCCCCeEEEE-eCCCeEEEEEcCCCce----eccCCCcEEEEEecCCcceeeeeeecccEEEEecCCCcEEEE
Q 036317 14 DANEVKLSNDGRLMLLT-TLEGHIHVLHSFQGTL----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSVYAW 88 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~~-~~~~~i~l~d~~~~~~----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~~w 88 (106)
.+..++|++.+..+..+ ..++.|..++...... ......+..+++.+.+ ++..++-...+.|.+.
T Consensus 38 ~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~----------~~LY~tD~~~~~I~v~ 107 (628)
T 4a0p_A 38 EASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLG----------KNLYWADTGTNRIEVS 107 (628)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTT----------TEEEEEETTTTEEEEE
T ss_pred ceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCC----------CEEEEEECCCCEEEEE
Confidence 56689999876666544 5678888888754433 1122345567777655 0333444455677777
Q ss_pred ECCCCC----------CCcEEEeCCC
Q 036317 89 SARSGK----------EPPVIKWAPG 104 (106)
Q Consensus 89 d~~~~~----------~v~~i~~sp~ 104 (106)
++.... .++.|+++|.
T Consensus 108 ~~dG~~~~~l~~~~l~~P~~iavdp~ 133 (628)
T 4a0p_A 108 KLDGQHRQVLVWKDLDSPRALALDPA 133 (628)
T ss_dssp ETTSTTCEEEECSSCCCEEEEEEETT
T ss_pred ecCCCcEEEEEeCCCCCcccEEEccC
Confidence 775332 4566666663
No 339
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=37.01 E-value=1e+02 Score=21.26 Aligned_cols=50 Identities=10% Similarity=-0.031 Sum_probs=29.0
Q ss_pred CCeeEEEECCC---CCeEEEEeC----C----CeEEEEEcCCC--ce----------ec-cCCCcEEEEEecCC
Q 036317 13 SDANEVKLSND---GRLMLLTTL----E----GHIHVLHSFQG--TL----------PV-SHNSTLEASFSQHL 62 (106)
Q Consensus 13 ~~v~~v~~spd---g~~l~~~~~----~----~~i~l~d~~~~--~~----------~~-~~~~~~~~~fs~d~ 62 (106)
.....++++|+ +..+.++.. + +.|..++...+ .+ +. .......+.|+|||
T Consensus 73 ~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG 146 (354)
T 3a9g_A 73 AGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDG 146 (354)
T ss_dssp CSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTS
T ss_pred CceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCC
Confidence 36789999998 444544332 2 56666665543 11 11 11123458999999
No 340
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=37.00 E-value=62 Score=25.11 Aligned_cols=32 Identities=9% Similarity=0.161 Sum_probs=26.0
Q ss_pred ecCCCCCCeeEEEECCCCCeEEEEeCCCeEEE
Q 036317 7 SDGGDVSDANEVKLSNDGRLMLLTTLEGHIHV 38 (106)
Q Consensus 7 ~~~~~~~~v~~v~~spdg~~l~~~~~~~~i~l 38 (106)
++..+..+|..+.+++++++|.+++.++-++|
T Consensus 464 ~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 464 TVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp ECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred eecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 34445568999999999999999998887776
No 341
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=33.65 E-value=1.2e+02 Score=20.90 Aligned_cols=49 Identities=6% Similarity=0.033 Sum_probs=33.6
Q ss_pred CeeEEEECC-------CCCeEEEEeCCCeEEEEEcCCCce-------eccCCCcEEEEEecCC
Q 036317 14 DANEVKLSN-------DGRLMLLTTLEGHIHVLHSFQGTL-------PVSHNSTLEASFSQHL 62 (106)
Q Consensus 14 ~v~~v~~sp-------dg~~l~~~~~~~~i~l~d~~~~~~-------~~~~~~~~~~~fs~d~ 62 (106)
....+.|.. +|+++++....+.|..++...++. ......+..+.+.|||
T Consensus 272 ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG 334 (353)
T 2g8s_A 272 AVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDG 334 (353)
T ss_dssp CEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTS
T ss_pred CcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCC
Confidence 566777753 577666666778888888766543 1123467789999999
No 342
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=31.63 E-value=1.2e+02 Score=20.35 Aligned_cols=24 Identities=17% Similarity=0.400 Sum_probs=15.7
Q ss_pred CCCeEEEEeC-C---------CeEEEEEcCCCce
Q 036317 23 DGRLMLLTTL-E---------GHIHVLHSFQGTL 46 (106)
Q Consensus 23 dg~~l~~~~~-~---------~~i~l~d~~~~~~ 46 (106)
+++.++.++. + ..+.++|..+.+-
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W 98 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSW 98 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTTTEE
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcE
Confidence 5666666654 1 4678888877765
No 343
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=31.62 E-value=76 Score=18.19 Aligned_cols=9 Identities=0% Similarity=-0.267 Sum_probs=6.8
Q ss_pred EEEEEecCC
Q 036317 54 LEASFSQHL 62 (106)
Q Consensus 54 ~~~~fs~d~ 62 (106)
+.+.+..+|
T Consensus 59 ~~l~l~~dG 67 (113)
T 3mez_B 59 CFMRLGHSG 67 (113)
T ss_dssp CEEEECTTS
T ss_pred EEEEEeCCC
Confidence 457788888
No 344
>1zso_A Hypothetical protein; structural genomics, PSI, protein structure initiative, STRU genomics of pathogenic protozoa consortium, SGPP; 2.17A {Plasmodium falciparum} SCOP: b.166.1.1
Probab=30.73 E-value=88 Score=19.76 Aligned_cols=28 Identities=11% Similarity=0.175 Sum_probs=20.7
Q ss_pred EEEecCCcceeeeeeecccEEEEecCCCcEEEEECCCCC
Q 036317 56 ASFSQHLSLVALSVLILRSWVLEGSGDGSVYAWSARSGK 94 (106)
Q Consensus 56 ~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~~wd~~~~~ 94 (106)
+.|.|++ .+++.+.+.|...=.|++.+.
T Consensus 115 ~eF~p~~-----------~w~a~~~esG~f~dvDLse~e 142 (164)
T 1zso_A 115 IDFFPSN-----------NFIVEDTKGKLYYDVNLSDQN 142 (164)
T ss_dssp EEECCCS-----------CEEEEETTSCEEEEECCTTSC
T ss_pred EEEecCC-----------cEEEEECCCCcEEeeecCCCc
Confidence 5788888 899988777744457777765
No 345
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=30.46 E-value=64 Score=24.78 Aligned_cols=19 Identities=11% Similarity=0.336 Sum_probs=15.7
Q ss_pred CCeeEEEECCCCCeEEEEe
Q 036317 13 SDANEVKLSNDGRLMLLTT 31 (106)
Q Consensus 13 ~~v~~v~~spdg~~l~~~~ 31 (106)
.+++.++||||++.|.++.
T Consensus 531 aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 531 CEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEEECTTSSEEEEEE
T ss_pred ccccCCEECCCCCEEEEEE
Confidence 4688999999999887765
No 346
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=29.98 E-value=2.3e+02 Score=23.32 Aligned_cols=73 Identities=10% Similarity=-0.066 Sum_probs=41.7
Q ss_pred CeeEEEECCCCCeEEEEeCCCeEEEEEcCCCce-----eccCCCcEEEEEecCCcceeeeeeecccEEEEecC-CCcEEE
Q 036317 14 DANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL-----PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSG-DGSVYA 87 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~-----~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~-d~~i~~ 87 (106)
.|...+.+. ..++.+. ++++.++++.++++ ..-...+.++++.|.. +.-...++++.|.. |+++++
T Consensus 515 ~I~~As~n~--~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~-----~~~~~s~~~aVg~~~d~tv~I 586 (1158)
T 3ei3_A 515 NISVASCNS--SQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLG-----DSNGLSPLCAIGLWTDISARI 586 (1158)
T ss_dssp CCCEEEECS--SEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCS-----SSTTCCSEEEEEETTTTEEEE
T ss_pred EEEEEEeCC--CEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCC-----CCcccccEEEEEECCCCEEEE
Confidence 455555443 3455554 67787777765554 1122345555665421 00001168888885 999999
Q ss_pred EECCCCC
Q 036317 88 WSARSGK 94 (106)
Q Consensus 88 wd~~~~~ 94 (106)
+++.+.+
T Consensus 587 ~sL~~l~ 593 (1158)
T 3ei3_A 587 LKLPSFE 593 (1158)
T ss_dssp EETTTCC
T ss_pred EECCCCC
Confidence 9998755
No 347
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=29.41 E-value=65 Score=24.98 Aligned_cols=33 Identities=6% Similarity=-0.105 Sum_probs=25.4
Q ss_pred CeeEEE-ECCCCCeEEEEeCC-----CeEEEEEcCCCce
Q 036317 14 DANEVK-LSNDGRLMLLTTLE-----GHIHVLHSFQGTL 46 (106)
Q Consensus 14 ~v~~v~-~spdg~~l~~~~~~-----~~i~l~d~~~~~~ 46 (106)
....+. ++||+++++.+-.+ ..++++|+.+++.
T Consensus 130 ~~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~ 168 (711)
T 4hvt_A 130 AYRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDF 168 (711)
T ss_dssp EEEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEE
T ss_pred EEeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCc
Confidence 345666 89999998876432 4789999999987
No 348
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=28.44 E-value=62 Score=24.28 Aligned_cols=34 Identities=15% Similarity=0.027 Sum_probs=24.8
Q ss_pred eeecCCCCCCee-EEEECCCCCeEEEEeCCCeEEE
Q 036317 5 IFSDGGDVSDAN-EVKLSNDGRLMLLTTLEGHIHV 38 (106)
Q Consensus 5 ~~~~~~~~~~v~-~v~~spdg~~l~~~~~~~~i~l 38 (106)
.+++..+..+|. .+.+++++.+|.+++.++-++|
T Consensus 442 ~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 442 MVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp EEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred EEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 344544345785 9999999999999887776665
No 349
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=27.20 E-value=2e+02 Score=21.69 Aligned_cols=69 Identities=13% Similarity=-0.028 Sum_probs=44.0
Q ss_pred CeeEEEECCCCCeEEEE-eCCCeEEEEEcCCCce---eccCCCcEEEEEecCCcceeeeeeecccEEEEecCCCcEEEEE
Q 036317 14 DANEVKLSNDGRLMLLT-TLEGHIHVLHSFQGTL---PVSHNSTLEASFSQHLSLVALSVLILRSWVLEGSGDGSVYAWS 89 (106)
Q Consensus 14 ~v~~v~~spdg~~l~~~-~~~~~i~l~d~~~~~~---~~~~~~~~~~~fs~d~~~~~~~~~~~~~~i~t~s~d~~i~~wd 89 (106)
..+.++++++++.|..+ ...+.|..+|...... ......+..+++.. + ...++-...+.|...|
T Consensus 167 ~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~v~~~~l~~P~glav~~-~-----------~ly~tD~~~~~I~~~d 234 (628)
T 4a0p_A 167 RANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIADDLPHPFGLTQYQ-D-----------YIYWTDWSRRSIERAN 234 (628)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECCSCEEEEEEET-T-----------EEEEEETTTTEEEEEE
T ss_pred CcceEEEccccCEEEEEECCCCEEEEEcCCCCceEEeeccCCCceEEEEEC-C-----------EEEEecCCCCEEEEEE
Confidence 56789999976666554 5667888888754322 11222344555554 3 4455555678899999
Q ss_pred CCCCC
Q 036317 90 ARSGK 94 (106)
Q Consensus 90 ~~~~~ 94 (106)
..+|+
T Consensus 235 k~tg~ 239 (628)
T 4a0p_A 235 KTSGQ 239 (628)
T ss_dssp TTTCC
T ss_pred CCCCC
Confidence 88887
No 350
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=24.16 E-value=91 Score=23.76 Aligned_cols=19 Identities=11% Similarity=0.336 Sum_probs=16.0
Q ss_pred CCeeEEEECCCCCeEEEEe
Q 036317 13 SDANEVKLSNDGRLMLLTT 31 (106)
Q Consensus 13 ~~v~~v~~spdg~~l~~~~ 31 (106)
.+++.+.|+||++.|.+..
T Consensus 531 aE~TG~~fspDg~tlfvni 549 (592)
T 3zwu_A 531 CEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEEECTTSSEEEEEE
T ss_pred ccCcCeeECCCCCEEEEEE
Confidence 4899999999999887653
No 351
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=23.36 E-value=3.8e+02 Score=23.47 Aligned_cols=32 Identities=25% Similarity=0.320 Sum_probs=26.7
Q ss_pred eeEEEECCCCCeEEEEeCCCeEEEEEcCCCce
Q 036317 15 ANEVKLSNDGRLMLLTTLEGHIHVLHSFQGTL 46 (106)
Q Consensus 15 v~~v~~spdg~~l~~~~~~~~i~l~d~~~~~~ 46 (106)
-.++..|+.-..+.+.+.-|.++++|+.||..
T Consensus 261 pv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~ 292 (1630)
T 1xi4_A 261 PVAMQISEKHDVVFLITKYGYIHLYDLETGTC 292 (1630)
T ss_pred ceEEEeccccCEEEEEecCceEEEEecccchh
Confidence 34677777777788889999999999999987
No 352
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=23.12 E-value=2.5e+02 Score=21.35 Aligned_cols=63 Identities=11% Similarity=0.213 Sum_probs=38.3
Q ss_pred CCCCeEEEEeCCC--eEEEEEcCCCce---e----c--cCCCcEEEEEecC-CcceeeeeeecccEEEEecC--C-----
Q 036317 22 NDGRLMLLTTLEG--HIHVLHSFQGTL---P----V--SHNSTLEASFSQH-LSLVALSVLILRSWVLEGSG--D----- 82 (106)
Q Consensus 22 pdg~~l~~~~~~~--~i~l~d~~~~~~---~----~--~~~~~~~~~fs~d-~~~~~~~~~~~~~~i~t~s~--d----- 82 (106)
.+++.++.++.++ .+.+||..+.+- . . .......+.+..+ + +.++.|+. +
T Consensus 499 ~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~-----------~iyv~GG~~~~~~~~~ 567 (695)
T 2zwa_A 499 PDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSK-----------QGIILGGGFMDQTTVS 567 (695)
T ss_dssp TTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTT-----------EEEEECCBCTTSSCBC
T ss_pred cCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCC-----------EEEEECCcCCCCCeee
Confidence 4777777776544 688999887765 1 0 1111123555554 6 66666654 2
Q ss_pred CcEEEEECCCCCC
Q 036317 83 GSVYAWSARSGKE 95 (106)
Q Consensus 83 ~~i~~wd~~~~~~ 95 (106)
..+.+||+++.++
T Consensus 568 ~~v~~yd~~~~~w 580 (695)
T 2zwa_A 568 DKAIIFKYDAENA 580 (695)
T ss_dssp CEEEEEEECTTCS
T ss_pred CcEEEEEccCCcc
Confidence 4688999988763
No 353
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=20.87 E-value=4.2e+02 Score=23.15 Aligned_cols=21 Identities=14% Similarity=0.161 Sum_probs=17.0
Q ss_pred cEEEEecCCCcEEEEECCCCC
Q 036317 74 SWVLEGSGDGSVYAWSARSGK 94 (106)
Q Consensus 74 ~~i~t~s~d~~i~~wd~~~~~ 94 (106)
..|.--..-|.++++|++||.
T Consensus 271 g~iy~itk~G~~~~~d~~t~~ 291 (1630)
T 1xi4_A 271 DVVFLITKYGYIHLYDLETGT 291 (1630)
T ss_pred CEEEEEecCceEEEEecccch
Confidence 555556677999999999998
No 354
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=20.85 E-value=3.6e+02 Score=22.26 Aligned_cols=34 Identities=9% Similarity=0.008 Sum_probs=27.6
Q ss_pred CCeeEEEECCC------CCeEEEEeC-CCeEEEEEcCCCce
Q 036317 13 SDANEVKLSND------GRLMLLTTL-EGHIHVLHSFQGTL 46 (106)
Q Consensus 13 ~~v~~v~~spd------g~~l~~~~~-~~~i~l~d~~~~~~ 46 (106)
++|.++++.|. +++++++.. |++++|+++.+.+.
T Consensus 554 ~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~ 594 (1158)
T 3ei3_A 554 HEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFEL 594 (1158)
T ss_dssp SCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCE
T ss_pred CceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCe
Confidence 48999999864 478899986 99999999976554
No 355
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1
Probab=20.80 E-value=1.3e+02 Score=17.33 Aligned_cols=11 Identities=18% Similarity=0.042 Sum_probs=7.3
Q ss_pred EEEEEecCCcc
Q 036317 54 LEASFSQHLSL 64 (106)
Q Consensus 54 ~~~~fs~d~~~ 64 (106)
..+.+..+|++
T Consensus 63 ~~l~l~~dGNL 73 (119)
T 1b2p_A 63 CRAVLQPDGVL 73 (119)
T ss_dssp CEEEECTTSCE
T ss_pred eEEEEccCCEE
Confidence 45777888833
Done!