BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>036322
METNEYSYQNKRLQFTNNHRDSVNMGHTNESETWESGDNLLDSVGFRVSWNHMEKNLVYR
SSYNREKDENQIYSSMLREEKVNPEDDSHLTDHLRARESEISSSSSSKFIDDVMFDRYLT
EANDLPKHAKECMKSGWDEERAEMILHKSARLLSQAIAMQHMSLLAVDQLGNTYLVREEL
KLHFSCKLRRLLLEGDVISVEEQKRILKGLDYQFMNKDKIASLLVDACEECEELLVKAGR
KYRLALSIDGNDVRALYNWGLALFFLETAFDADKIFSAAIDNFDAMMLKGNIYAPDALFG
WAVALQQRSRLRPRNSKEKVKLLQQARRLYQDALHMNSDNLQVREALSSCMSELNHGDFF

High Scoring Gene Products

Symbol, full name Information P value
AT5G41950 protein from Arabidopsis thaliana 2.5e-05

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  036322
        (360 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2165725 - symbol:AT5G41950 species:3702 "Arabi...   130  2.5e-05   1


>TAIR|locus:2165725 [details] [associations]
            symbol:AT5G41950 species:3702 "Arabidopsis thaliana"
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005742 "mitochondrial
            outer membrane translocase complex" evidence=IEA] [GO:0045040
            "protein import into mitochondrial outer membrane" evidence=IEA]
            [GO:0005829 "cytosol" evidence=IDA] InterPro:IPR010547
            InterPro:IPR011990 Pfam:PF06552 GO:GO:0005829 EMBL:CP002688
            GenomeReviews:BA000015_GR EMBL:AB017067 Gene3D:1.25.40.10
            GO:GO:0045040 GO:GO:0005742 EMBL:AY085561 EMBL:AY128348
            EMBL:BT030345 IPI:IPI00527844 RefSeq:NP_199010.1 UniGene:At.20158
            ProteinModelPortal:Q9FHY8 SMR:Q9FHY8 PaxDb:Q9FHY8 PRIDE:Q9FHY8
            ProMEX:Q9FHY8 EnsemblPlants:AT5G41950.1 GeneID:834200
            KEGG:ath:AT5G41950 TAIR:At5g41950 eggNOG:NOG255396
            HOGENOM:HOG000243540 InParanoid:Q9FHY8 OMA:NHEGLQQ PhylomeDB:Q9FHY8
            ProtClustDB:CLSN2686420 ArrayExpress:Q9FHY8 Genevestigator:Q9FHY8
            Uniprot:Q9FHY8
        Length = 565

 Score = 130 (50.8 bits), Expect = 2.5e-05, P = 2.5e-05
 Identities = 41/134 (30%), Positives = 67/134 (50%)

Query:   232 EELLVKAGRKYRLALSIDGNDVRALYNWGLALFFLETAFDA---------DKIFSAAIDN 282
             + +L  A RKY  A+  + +D  ALYNW  AL   E+A +          D +   A   
Sbjct:   202 QRVLAFAARKYASAIERNPDDHDALYNW--ALILQESADNVSPDSVSPSKDDLLEEACKK 259

Query:   283 FD-AMMLKGNIYAPDALFGWAVALQQRSRLRPRNSKEKVKLLQQARRLYQDALHMNSDNL 341
             +D A  L   +Y  DA + WA+A+  R+++R R +KE  +L +QA   Y+ A+ +N ++ 
Sbjct:   260 YDEATRLCPTLY--DAYYNWAIAISDRAKIRGR-TKEAEELWEQAADNYEKAVQLNWNSS 316

Query:   342 QVREALSSCMSELN 355
             Q        + EL+
Sbjct:   317 QALNNWGLVLQELS 330


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.133   0.385    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      360       350    0.0010  116 3  11 22  0.38    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  607 (65 KB)
  Total size of DFA:  246 KB (2132 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  30.18u 0.07s 30.25t   Elapsed:  00:00:02
  Total cpu time:  30.18u 0.07s 30.25t   Elapsed:  00:00:02
  Start:  Sat May 11 10:28:38 2013   End:  Sat May 11 10:28:40 2013

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