Query 036324
Match_columns 91
No_of_seqs 103 out of 223
Neff 6.0
Searched_HMMs 13730
Date Mon Mar 25 19:51:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036324.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/036324hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ijwc_ a.4.1.2 (C:) HIN recom 97.4 4.9E-05 3.6E-09 41.4 3.1 36 47-82 7-42 (47)
2 d1i5za1 a.4.5.4 (A:138-206) Ca 95.8 0.0071 5.1E-07 33.9 4.4 40 47-86 2-54 (69)
3 d1hlva1 a.4.1.7 (A:1-66) DNA-b 95.6 0.0078 5.7E-07 34.5 4.1 42 43-84 6-48 (66)
4 d1ft9a1 a.4.5.4 (A:134-213) CO 95.5 0.0089 6.5E-07 34.3 4.0 40 47-86 2-55 (80)
5 d1zyba1 a.4.5.4 (A:148-220) Pr 95.4 0.011 8E-07 33.8 4.2 43 45-87 3-53 (73)
6 d2gaua1 a.4.5.4 (A:152-232) Tr 95.2 0.013 9.4E-07 33.4 4.2 41 47-87 2-55 (81)
7 d1l3la1 a.4.6.2 (A:170-234) Qu 93.2 0.055 4E-06 29.8 3.8 35 55-89 13-47 (65)
8 d2zcwa1 a.4.5.4 (A:118-199) Tr 93.1 0.068 5E-06 30.4 4.3 40 47-86 2-54 (82)
9 d1a04a1 a.4.6.2 (A:150-216) Ni 92.9 0.064 4.7E-06 29.7 3.8 34 56-89 16-49 (67)
10 d1fsea_ a.4.6.2 (A:) Germinati 92.7 0.072 5.3E-06 29.4 3.8 34 56-89 14-47 (67)
11 d1rp3a2 a.4.13.2 (A:164-234) S 92.6 0.15 1.1E-05 27.7 5.2 45 44-89 21-65 (71)
12 d1yioa1 a.4.6.2 (A:131-200) Re 92.6 0.065 4.7E-06 30.0 3.6 32 58-89 24-55 (70)
13 d1k78a1 a.4.1.5 (A:19-81) Pax- 92.6 0.15 1.1E-05 28.5 5.1 44 40-84 10-53 (63)
14 d1vz0a1 a.4.14.1 (A:116-208) P 91.9 0.088 6.4E-06 31.3 3.8 37 46-83 5-41 (93)
15 d3e5ua1 a.4.5.4 (A:148-227) Ch 91.8 0.098 7.2E-06 29.5 3.8 41 47-87 2-56 (80)
16 d2bgca1 a.4.5.4 (A:138-237) Li 91.7 0.093 6.8E-06 31.6 3.7 26 61-86 31-57 (100)
17 d1r1ua_ a.4.5.5 (A:) Metal-sen 91.6 0.42 3.1E-05 28.0 6.7 57 22-87 1-57 (94)
18 d1r1ta_ a.4.5.5 (A:) SmtB repr 91.2 0.41 3E-05 28.2 6.3 58 21-87 5-62 (98)
19 d1pdnc_ a.4.1.5 (C:) Paired pr 91.2 0.18 1.3E-05 31.1 4.8 44 40-84 12-55 (123)
20 d1j1va_ a.4.12.2 (A:) Chromoso 90.7 0.24 1.7E-05 29.1 4.9 46 43-88 28-74 (94)
21 d1l8qa1 a.4.12.2 (A:290-399) C 90.6 0.19 1.4E-05 30.6 4.5 45 43-87 41-86 (110)
22 d2hsga1 a.35.1.5 (A:2-58) Gluc 90.4 0.063 4.6E-06 29.5 1.8 23 61-83 1-23 (57)
23 d1qpza1 a.35.1.5 (A:2-58) Puri 89.3 0.095 6.9E-06 28.7 2.0 22 63-84 2-23 (57)
24 d1p4wa_ a.4.6.2 (A:) Transcrip 88.5 0.23 1.7E-05 28.7 3.5 44 44-89 22-65 (87)
25 d1s7oa_ a.4.13.3 (A:) Hypothet 88.0 0.43 3.1E-05 28.8 4.7 44 45-89 17-60 (106)
26 d2jn6a1 a.4.1.19 (A:1-89) Unch 87.7 0.21 1.5E-05 28.8 2.9 42 44-85 5-47 (89)
27 d1aisb1 a.74.1.2 (B:1108-1205) 87.5 1.5 0.00011 25.0 8.6 75 15-89 12-90 (98)
28 d1biaa1 a.4.5.1 (A:1-63) Bioti 87.1 0.29 2.1E-05 26.7 3.2 24 62-85 20-43 (63)
29 d2d1ha1 a.4.5.50 (A:1-109) Hyp 85.9 0.44 3.2E-05 27.9 3.8 28 60-87 35-62 (109)
30 d1efaa1 a.35.1.5 (A:2-60) Lac 85.5 0.19 1.4E-05 27.6 1.8 22 62-83 3-24 (59)
31 d1j5ya1 a.4.5.1 (A:3-67) Putat 84.4 0.64 4.7E-05 25.2 3.8 24 62-85 23-46 (65)
32 d1yu8x1 a.14.1.1 (X:42-76) Vil 83.9 0.25 1.8E-05 24.7 1.6 23 11-33 2-24 (35)
33 d1unda_ a.14.1.1 (A:) Advillin 83.7 0.34 2.5E-05 24.2 2.1 23 11-33 3-25 (36)
34 d1vola1 a.74.1.2 (A:113-207) T 83.1 2.6 0.00019 23.8 7.8 75 15-89 12-90 (95)
35 d1uxda_ a.35.1.5 (A:) Fructose 82.5 0.33 2.4E-05 26.5 1.9 21 63-83 2-22 (59)
36 d1d5ya1 a.4.1.8 (A:3-56) Rob t 82.3 0.54 3.9E-05 24.3 2.7 27 60-86 18-44 (54)
37 d1ku9a_ a.4.5.36 (A:) DNA-bind 82.3 1.8 0.00013 25.9 5.7 59 24-87 9-67 (151)
38 d1jhga_ a.4.12.1 (A:) Trp repr 81.3 0.87 6.4E-05 27.5 3.8 36 47-82 44-79 (101)
39 d1jhfa1 a.4.5.2 (A:2-72) LexA 81.2 0.58 4.2E-05 26.0 2.7 27 59-85 22-49 (71)
40 d1ixca1 a.4.5.37 (A:1-89) LysR 81.2 0.93 6.7E-05 25.9 3.8 38 49-87 4-41 (89)
41 d1r71a_ a.4.14.1 (A:) Transcri 81.2 1.1 8.2E-05 26.5 4.3 38 45-83 15-52 (114)
42 d1xsva_ a.4.13.3 (A:) Hypothet 81.1 1.5 0.00011 26.2 4.9 42 48-89 21-62 (106)
43 d1ub9a_ a.4.5.28 (A:) Hypothet 79.2 0.97 7E-05 25.8 3.4 27 61-87 30-56 (100)
44 d2g7sa1 a.4.1.9 (A:3-76) Putat 79.2 0.73 5.3E-05 25.1 2.7 34 50-83 13-46 (74)
45 d2i10a1 a.4.1.9 (A:10-78) Puta 78.5 1.4 0.0001 23.6 3.8 36 48-83 7-42 (69)
46 d1u2wa1 a.4.5.5 (A:12-119) Cad 78.1 1.3 9.4E-05 26.3 3.8 41 48-88 31-72 (108)
47 d1ku3a_ a.4.13.2 (A:) Sigma70 78.0 3.2 0.00024 22.3 5.2 45 45-89 9-56 (61)
48 d1or7a1 a.4.13.2 (A:120-187) S 77.8 3.1 0.00023 22.0 5.2 44 45-89 19-62 (68)
49 d2frha1 a.4.5.28 (A:102-216) P 77.8 2.8 0.0002 24.5 5.3 66 14-86 7-74 (115)
50 d1lnwa_ a.4.5.28 (A:) MexR rep 76.9 4.6 0.00033 24.0 6.3 70 12-86 6-75 (141)
51 d2esna1 a.4.5.37 (A:3-91) Prob 76.3 1.4 0.0001 25.1 3.4 39 49-88 9-47 (89)
52 d1bl0a1 a.4.1.8 (A:9-62) MarA 75.8 1.2 8.9E-05 22.8 2.9 25 62-86 20-44 (54)
53 d2gena1 a.4.1.9 (A:6-75) Proba 75.6 1.3 9.6E-05 23.6 3.1 34 50-83 9-42 (70)
54 d2fx0a1 a.4.1.9 (A:4-76) Hemol 75.5 1.7 0.00012 23.7 3.6 33 51-83 14-46 (73)
55 d2hr3a1 a.4.5.28 (A:2-146) Pro 75.4 2 0.00015 25.8 4.3 58 26-86 16-74 (145)
56 d2id3a1 a.4.1.9 (A:13-80) Puta 74.7 1.7 0.00013 23.1 3.5 35 49-83 14-48 (68)
57 d2ppxa1 a.35.1.3 (A:30-91) Unc 74.7 0.76 5.5E-05 24.6 1.8 24 58-81 9-32 (62)
58 d2etha1 a.4.5.28 (A:1-140) Put 73.8 6.4 0.00047 23.1 6.6 43 44-86 29-71 (140)
59 d1mkma1 a.4.5.33 (A:1-75) Tran 73.2 4.1 0.0003 22.2 4.9 41 47-87 4-46 (75)
60 d1sgma1 a.4.1.9 (A:5-77) Putat 73.1 1.4 9.9E-05 23.8 2.7 36 47-82 8-43 (73)
61 d1z91a1 a.4.5.28 (A:8-144) Org 73.1 2.2 0.00016 25.4 4.0 64 15-86 8-72 (137)
62 d2vkva1 a.4.1.9 (A:6-67) Tetra 72.9 1.2 8.4E-05 23.6 2.3 33 51-83 9-41 (62)
63 d1z05a1 a.4.5.63 (A:10-80) Tra 72.7 3.3 0.00024 22.2 4.3 30 59-88 18-47 (71)
64 d2o7ta1 a.4.1.9 (A:1-78) Trans 72.4 1.1 8E-05 24.7 2.2 32 52-83 18-49 (78)
65 d2auwa1 a.35.1.10 (A:88-154) H 72.4 1.2 8.6E-05 24.7 2.3 26 56-81 9-34 (67)
66 d1aisb2 a.74.1.2 (B:1206-1300) 71.8 6.2 0.00045 22.1 7.7 73 16-89 11-88 (95)
67 d3bwga1 a.4.5.6 (A:5-82) Trans 71.7 4.8 0.00035 22.0 5.0 43 26-85 4-46 (78)
68 d3deua1 a.4.5.28 (A:2-141) Tra 71.7 3.6 0.00026 24.3 4.7 42 45-86 29-71 (140)
69 d2isya1 a.4.5.24 (A:2-64) Iron 71.7 2 0.00015 23.3 3.2 28 59-86 21-48 (63)
70 d1ttya_ a.4.13.2 (A:) Sigma70 70.8 5.4 0.00039 22.9 5.2 46 44-89 18-66 (87)
71 d1v7ba1 a.4.1.9 (A:1-74) Trans 70.6 1.3 9.8E-05 23.9 2.3 36 48-83 11-46 (74)
72 d2p7vb1 a.4.13.2 (B:546-613) S 70.2 4.5 0.00033 22.2 4.6 44 46-89 7-53 (68)
73 d2fbqa1 a.4.1.9 (A:2-80) Trans 70.1 2 0.00014 23.4 3.0 34 50-83 13-46 (79)
74 d2fbia1 a.4.5.28 (A:5-140) Pro 69.5 2.9 0.00021 24.7 4.0 42 45-86 28-69 (136)
75 d2hkua1 a.4.1.9 (A:18-87) Puta 69.4 3.1 0.00022 22.3 3.7 34 49-83 9-42 (70)
76 d2fbka1 a.4.5.28 (A:8-179) Tra 69.2 6 0.00044 24.5 5.6 65 16-86 38-104 (172)
77 d2bv6a1 a.4.5.28 (A:5-140) Tra 69.2 3.4 0.00025 24.4 4.2 68 12-86 5-73 (136)
78 d2id6a1 a.4.1.9 (A:1-75) Trans 68.5 2.3 0.00017 23.0 3.0 35 49-83 11-45 (75)
79 d1pb6a1 a.4.1.9 (A:14-85) Hypo 68.5 2.4 0.00018 22.8 3.1 32 52-83 15-46 (72)
80 d1p4xa2 a.4.5.28 (A:126-250) S 68.1 4 0.00029 24.3 4.4 56 25-86 17-74 (125)
81 d2gfna1 a.4.1.9 (A:4-80) Proba 67.6 2.4 0.00017 23.0 3.0 34 50-83 15-48 (77)
82 d1t56a1 a.4.1.9 (A:22-94) Ethr 67.5 1.7 0.00012 23.3 2.2 32 52-83 14-45 (73)
83 d1qzpa_ a.14.1.1 (A:) Dematin 67.2 1.5 0.00011 24.6 2.0 24 11-34 35-58 (68)
84 d2g7ga1 a.4.1.9 (A:9-73) Putat 67.2 1.8 0.00013 23.1 2.4 25 59-84 18-42 (65)
85 d1yu5x1 a.14.1.1 (X:10-76) Vil 66.8 1.3 9.1E-05 24.9 1.6 23 11-33 34-56 (67)
86 d1z6ra1 a.4.5.63 (A:12-81) Mlc 66.6 5.3 0.00038 21.5 4.3 27 62-88 20-46 (70)
87 d2g3ba1 a.4.1.9 (A:2-73) Putat 66.6 2.7 0.00019 22.5 3.0 32 52-83 13-44 (72)
88 d2ev0a1 a.4.5.24 (A:2-62) Mang 66.4 2 0.00015 23.1 2.4 28 59-86 19-46 (61)
89 d1vi0a1 a.4.1.9 (A:6-77) Hypot 65.5 2.4 0.00018 22.6 2.7 24 60-83 20-43 (72)
90 d1jt6a1 a.4.1.9 (A:2-72) Multi 65.3 4.4 0.00032 21.4 3.8 26 59-84 19-44 (71)
91 d2d6ya1 a.4.1.9 (A:7-74) Putat 65.1 4.5 0.00032 21.4 3.8 34 50-83 11-44 (68)
92 d2o38a1 a.35.1.13 (A:28-116) H 65.0 1.6 0.00012 24.8 1.9 28 56-83 19-46 (89)
93 d2a61a1 a.4.5.28 (A:5-143) Tra 64.7 6.9 0.0005 23.0 5.0 44 44-87 27-70 (139)
94 d1ulya_ a.4.5.58 (A:) Hypothet 64.3 4.1 0.0003 25.5 4.0 30 59-88 30-59 (190)
95 d2fd5a1 a.4.1.9 (A:1-76) Proba 63.7 2.5 0.00018 22.8 2.5 34 50-83 16-49 (76)
96 d1zk8a1 a.4.1.9 (A:6-77) Trans 63.6 1.6 0.00012 23.5 1.6 35 49-83 11-45 (72)
97 d1z0xa1 a.4.1.9 (A:4-71) Trans 62.4 0.83 6E-05 24.7 0.2 23 61-83 23-45 (68)
98 d1t33a1 a.4.1.9 (A:1-88) Putat 61.8 2.1 0.00015 23.9 1.9 25 59-83 29-53 (88)
99 d1vola2 a.74.1.2 (A:208-316) T 60.4 12 0.0009 21.4 6.5 73 14-87 10-87 (109)
100 d2iu5a1 a.4.1.9 (A:1-71) Trans 60.0 1 7.3E-05 24.4 0.3 24 60-83 25-48 (71)
101 d3c07a1 a.4.1.9 (A:15-89) Puta 59.9 3.1 0.00022 22.2 2.4 33 51-83 15-47 (75)
102 d2croa_ a.35.1.2 (A:) cro 434 59.4 2.4 0.00017 22.3 1.8 26 58-83 13-38 (65)
103 d3broa1 a.4.5.28 (A:3-137) Tra 58.8 8.1 0.00059 22.4 4.5 42 45-86 27-70 (135)
104 d2np5a1 a.4.1.9 (A:9-77) Trans 58.5 1.6 0.00012 23.1 1.0 24 59-82 19-42 (69)
105 d2fbha1 a.4.5.28 (A:8-144) Tra 58.2 6.1 0.00044 23.1 3.8 27 60-86 42-68 (137)
106 d1utxa_ a.35.1.3 (A:) Putative 58.0 2.6 0.00019 22.3 1.8 27 57-83 10-36 (66)
107 d1rkta1 a.4.1.9 (A:2-82) Hypot 57.8 2.6 0.00019 23.0 1.9 37 47-83 17-53 (81)
108 d1hw1a1 a.4.5.6 (A:5-78) Fatty 57.4 3.8 0.00028 22.5 2.6 41 28-85 11-51 (74)
109 d2o5ha1 d.363.1.1 (A:1-131) Hy 57.1 3.8 0.00027 25.7 2.7 34 22-55 48-86 (131)
110 d1sfxa_ a.4.5.50 (A:) Hypothet 56.9 8.6 0.00062 22.0 4.3 53 27-86 7-59 (109)
111 d2icta1 a.35.1.3 (A:8-94) Anti 56.8 3.5 0.00025 23.2 2.3 28 56-83 9-36 (87)
112 d2np3a1 a.4.1.9 (A:35-99) Puta 56.1 0.81 5.9E-05 24.6 -0.6 24 60-83 15-38 (65)
113 d1lmb3_ a.35.1.2 (3:) lambda C 56.0 2.7 0.0002 23.7 1.8 26 57-82 21-46 (87)
114 d2fq4a1 a.4.1.9 (A:9-77) Trans 55.2 5.1 0.00037 21.2 2.8 33 52-84 15-47 (69)
115 d1ui5a1 a.4.1.9 (A:5-75) A-fac 55.1 5.1 0.00037 21.3 2.8 34 50-83 14-47 (71)
116 d2hyja1 a.4.1.9 (A:8-82) Putat 55.0 3.1 0.00022 22.4 1.8 25 59-83 23-47 (75)
117 d1s3ja_ a.4.5.28 (A:) Putative 54.5 17 0.0012 21.1 6.1 59 20-86 15-74 (143)
118 d1gdta1 a.4.1.2 (A:141-183) ga 54.2 3.2 0.00024 21.2 1.7 26 59-84 16-41 (43)
119 d2fxaa1 a.4.5.28 (A:6-167) Pro 54.1 18 0.0013 22.1 5.9 43 44-86 38-80 (162)
120 d2oi8a1 a.4.1.9 (A:8-86) Putat 53.8 4 0.00029 22.1 2.2 31 53-83 21-51 (79)
121 d1af7a1 a.58.1.1 (A:11-91) Che 52.6 13 0.00094 20.1 4.4 46 18-63 9-56 (81)
122 d1i1ga1 a.4.5.32 (A:2-61) LprA 52.6 6.1 0.00045 20.6 2.8 27 62-88 18-44 (60)
123 d2cg4a1 a.4.5.32 (A:4-66) Regu 52.0 6.3 0.00046 20.7 2.8 27 61-87 19-45 (63)
124 d2cyya1 a.4.5.32 (A:5-64) Puta 51.8 6.5 0.00047 20.4 2.8 26 62-87 18-43 (60)
125 d1jgsa_ a.4.5.28 (A:) Multiple 51.3 16 0.0012 21.3 5.0 43 45-87 32-74 (138)
126 d2hs5a1 a.4.5.6 (A:25-93) Puta 49.9 4.1 0.0003 21.9 1.8 43 25-85 7-49 (69)
127 d1lj9a_ a.4.5.28 (A:) Transcri 49.9 7.9 0.00058 23.0 3.4 26 61-86 43-68 (144)
128 d1y7ya1 a.35.1.3 (A:5-73) Rest 49.0 4.4 0.00032 21.4 1.8 27 56-82 17-43 (69)
129 d2p4wa1 a.4.5.64 (A:1-194) Tra 48.7 9.8 0.00071 23.9 3.9 28 60-87 27-54 (194)
130 d1r69a_ a.35.1.2 (A:) 434 C1 r 47.6 4.9 0.00035 20.8 1.8 26 58-83 11-36 (63)
131 d2g7la1 a.4.1.9 (A:16-83) Puta 47.1 5.2 0.00038 21.1 2.0 34 50-83 13-46 (68)
132 d1b0na2 a.35.1.3 (A:1-68) SinR 46.3 6.6 0.00048 20.5 2.3 27 57-83 10-36 (68)
133 d1ujsa_ a.14.1.1 (A:) Actin-bi 45.7 3 0.00022 24.4 0.8 29 11-39 49-81 (88)
134 d2b5aa1 a.35.1.3 (A:1-77) Regu 45.5 6.8 0.0005 20.9 2.3 26 58-83 20-45 (77)
135 d2oa4a1 a.4.12.3 (A:1-93) Unch 45.3 25 0.0018 20.4 5.7 49 40-88 29-77 (93)
136 d1x57a1 a.35.1.12 (A:8-85) End 45.2 6.9 0.0005 21.3 2.3 27 56-82 14-40 (78)
137 d1b9ma1 a.4.5.8 (A:-1-126) N-t 44.9 6.9 0.0005 22.9 2.4 36 49-85 21-56 (127)
138 d2cfxa1 a.4.5.32 (A:1-63) Tran 44.6 8.1 0.00059 20.3 2.5 25 62-86 20-44 (63)
139 d2ofya1 a.35.1.3 (A:3-84) Puta 44.3 13 0.00092 20.6 3.5 33 49-81 13-45 (82)
140 d1hsja1 a.4.5.28 (A:373-487) S 42.8 26 0.0019 19.9 6.2 42 44-85 29-72 (115)
141 d2r1jl1 a.35.1.2 (L:3-68) P22 42.6 5.4 0.0004 20.7 1.5 26 58-83 13-38 (66)
142 d2hoea1 a.4.5.63 (A:10-71) N-a 41.6 13 0.00092 19.5 3.0 29 60-88 11-39 (62)
143 d1y9qa1 a.35.1.8 (A:4-82) Prob 41.2 6.2 0.00045 21.2 1.7 26 58-83 18-43 (79)
144 d2ezla_ a.4.1.2 (A:) Ibeta sub 40.6 8.8 0.00064 22.7 2.4 23 63-85 55-77 (99)
145 d3ctaa1 a.4.5.28 (A:5-89) Ta10 38.7 8.6 0.00063 21.4 2.1 26 61-86 21-46 (85)
146 d2a6ca1 a.35.1.13 (A:1-69) HTH 38.3 9.6 0.0007 20.1 2.2 27 57-83 15-41 (69)
147 d1rr7a_ a.4.1.14 (A:) Middle o 38.1 11 0.00077 21.7 2.5 26 60-85 65-90 (94)
148 d1j9ia_ a.6.1.5 (A:) Terminase 37.9 7.5 0.00054 21.6 1.6 20 63-82 4-23 (68)
149 d1v4ra1 a.4.5.6 (A:1-100) Tran 35.6 7.1 0.00052 22.4 1.4 21 63-83 35-55 (100)
150 d2g9wa1 a.4.5.39 (A:3-124) Hyp 35.6 22 0.0016 20.7 3.8 41 46-86 7-51 (122)
151 d1gv2a2 a.4.1.3 (A:144-190) c- 34.1 26 0.0019 17.3 3.6 41 46-86 5-46 (47)
152 d1zk8a2 a.121.1.1 (A:78-182) T 32.7 36 0.0027 18.6 6.8 74 11-90 21-101 (105)
153 d2p5ka1 a.4.5.3 (A:2-64) Argin 32.5 12 0.00087 20.1 1.9 31 44-85 17-47 (63)
154 d2o3fa1 a.4.1.20 (A:1-83) Puta 31.7 14 0.00099 20.5 2.1 37 46-84 18-59 (83)
155 d1p4xa1 a.4.5.28 (A:1-125) Sta 30.6 45 0.0033 19.0 6.5 43 44-86 31-75 (125)
156 d1zq1a2 c.88.1.1 (A:76-438) Gl 30.6 14 0.001 25.9 2.5 42 32-74 306-347 (363)
157 d1okra_ a.4.5.39 (A:) Methicil 28.5 42 0.0031 19.0 4.2 39 46-85 7-49 (120)
158 d1g2ha_ a.4.1.12 (A:) Transcri 28.3 24 0.0018 18.3 2.8 23 62-84 34-56 (61)
159 d1wsaa_ c.88.1.1 (A:) Asparagi 28.2 20 0.0014 24.6 2.9 33 41-73 295-327 (328)
160 d1pd0a4 d.109.2.1 (A:754-926) 27.7 5.5 0.0004 25.0 -0.2 37 52-89 54-106 (173)
161 d1ztda1 a.149.1.2 (A:2-125) Hy 26.2 39 0.0029 20.2 3.7 41 44-90 76-116 (124)
162 d1umqa_ a.4.1.12 (A:) Photosyn 25.7 18 0.0013 18.7 1.8 25 60-84 32-56 (60)
163 d2cu7a1 a.4.1.3 (A:8-72) MYSM1 25.6 42 0.003 17.1 4.9 43 46-88 6-49 (65)
164 d1nnsa_ c.88.1.1 (A:) Asparagi 25.6 22 0.0016 24.3 2.7 32 42-73 294-325 (326)
165 d1fx0a1 a.69.1.1 (A:373-501) F 25.5 31 0.0022 20.5 3.2 19 42-61 54-72 (129)
166 d1e0ga_ d.7.1.1 (A:) Membrane- 24.6 8.8 0.00064 19.4 0.3 25 56-80 5-29 (48)
167 d1b4aa1 a.4.5.3 (A:4-78) Argin 24.2 18 0.0013 20.0 1.7 31 44-85 15-45 (75)
168 d1xmka1 a.4.5.19 (A:294-366) Z 24.0 56 0.0041 17.9 4.0 39 47-89 6-44 (73)
169 d1aoya_ a.4.5.3 (A:) Arginine 23.6 21 0.0015 19.9 1.9 15 71-85 38-53 (78)
170 d2jdia1 a.69.1.1 (A:380-510) F 23.4 42 0.0031 19.8 3.5 21 40-61 52-72 (131)
171 d1o7ja_ c.88.1.1 (A:) Asparagi 22.1 22 0.0016 24.2 2.2 31 42-72 293-323 (325)
172 d1repc1 a.4.5.10 (C:15-143) Re 22.0 63 0.0046 18.5 4.1 29 62-90 48-76 (129)
173 d1ntca_ a.4.1.12 (A:) DNA-bind 21.8 60 0.0044 17.5 4.0 32 53-84 56-87 (91)
174 d2qaln1 g.39.1.7 (N:1-100) Rib 21.5 9.9 0.00072 22.2 0.1 25 8-32 65-89 (100)
175 d1ku1a_ a.118.3.1 (A:) ARF gua 21.2 98 0.0071 19.7 5.6 41 31-75 31-71 (211)
176 d2uubn1 g.39.1.7 (N:2-61) Ribo 20.8 12 0.00088 20.1 0.4 25 8-32 25-49 (60)
177 d1iufa1 a.4.1.7 (A:-2-75) Ars- 20.6 23 0.0017 19.9 1.7 40 43-82 10-57 (78)
178 d2ocda1 c.88.1.1 (A:2-337) Asp 20.4 36 0.0026 23.1 3.1 34 41-74 296-329 (336)
179 d1agxa_ c.88.1.1 (A:) Glutamin 20.1 32 0.0024 23.3 2.7 34 40-73 297-330 (331)
No 1
>d1ijwc_ a.4.1.2 (C:) HIN recombinase (DNA-binding domain) {Synthetic}
Probab=97.44 E-value=4.9e-05 Score=41.44 Aligned_cols=36 Identities=17% Similarity=0.174 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHhhcCcchhhhhhccccchhhHHHHH
Q 036324 47 IEEQLCMFLHILAHHVKSRTIHSRFLRSRETISRYF 82 (91)
Q Consensus 47 veE~vamFL~i~~~~~~~r~i~~~F~~S~eTisr~f 82 (91)
.+||++-..-.++.|.+..+|+..|++|+.||+|||
T Consensus 7 t~~q~~~a~~l~~~G~s~~~iA~~~gVSr~TiYry~ 42 (47)
T d1ijwc_ 7 NKHEQEQISRLLEKGHPRQQLAIIFGIGVSTLYRYF 42 (47)
T ss_dssp CHHHHHHHHHHHHTTCCHHHHHHHHTCCHHHHHHHS
T ss_pred CHHHHHHHHHHHHCCCCHHHHHHHHCcCHHHHHhhC
Confidence 357888888888999999999999999999999997
No 2
>d1i5za1 a.4.5.4 (A:138-206) Catabolite gene activator protein (CAP), C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=95.80 E-value=0.0071 Score=33.91 Aligned_cols=40 Identities=23% Similarity=0.286 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHhhc-------------CcchhhhhhccccchhhHHHHHHHHH
Q 036324 47 IEEQLCMFLHILAH-------------HVKSRTIHSRFLRSRETISRYFNLVL 86 (91)
Q Consensus 47 veE~vamFL~i~~~-------------~~~~r~i~~~F~~S~eTisr~f~~Vl 86 (91)
+.++||-||+.++. +.+..++++.-|-|++||||.+++.-
T Consensus 2 v~~Rla~~Ll~l~~~~g~~~~~~~i~l~lt~~~lA~~~G~sRetvsr~L~~l~ 54 (69)
T d1i5za1 2 VTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLE 54 (69)
T ss_dssp HHHHHHHHHHHGGGSTTCCCCSSSCEEECCHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCeeecCCCHHHHHHHHCCCHHHHHHHHHHHH
Confidence 56777777777663 26889999999999999999998753
No 3
>d1hlva1 a.4.1.7 (A:1-66) DNA-binding domain of centromere binding protein B (CENP-B) {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.63 E-value=0.0078 Score=34.49 Aligned_cols=42 Identities=14% Similarity=0.209 Sum_probs=36.0
Q ss_pred CCccHHHHHHHHHHHhhcC-cchhhhhhccccchhhHHHHHHH
Q 036324 43 GTVSIEEQLCMFLHILAHH-VKSRTIHSRFLRSRETISRYFNL 84 (91)
Q Consensus 43 ~~v~veE~vamFL~i~~~~-~~~r~i~~~F~~S~eTisr~f~~ 84 (91)
+.+|++|++.|--+.=.+. .++.+|+..||.+.+|||.+..+
T Consensus 6 k~LT~~eK~~ii~~~e~g~k~sq~eIA~~fGv~~STvs~IlKn 48 (66)
T d1hlva1 6 RQLTFREKSRIIQEVEENPDLRKGEIARRFNIPPSTLSTILKN 48 (66)
T ss_dssp CCCCHHHHHHHHHHHHHCTTSCHHHHHHHHTCCHHHHHHHHHT
T ss_pred ccCCHHHHHHHHHHHHcCCcchHHHHHHHhCCChhHHHHHHHH
Confidence 3689999999988777655 68999999999999999998753
No 4
>d1ft9a1 a.4.5.4 (A:134-213) CO-sensing protein CooA, C-terminal domain {Rhodospirillum rubrum [TaxId: 1085]}
Probab=95.46 E-value=0.0089 Score=34.27 Aligned_cols=40 Identities=23% Similarity=0.249 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHhhc--------------CcchhhhhhccccchhhHHHHHHHHH
Q 036324 47 IEEQLCMFLHILAH--------------HVKSRTIHSRFLRSRETISRYFNLVL 86 (91)
Q Consensus 47 veE~vamFL~i~~~--------------~~~~r~i~~~F~~S~eTisr~f~~Vl 86 (91)
++++||=||+.++. +.+..++++.-|.|++||||.+.+.-
T Consensus 2 v~~Rla~~Ll~l~~~~g~~~~~~~~i~~~~t~~eiA~~lG~sretvsr~l~~l~ 55 (80)
T d1ft9a1 2 IKQRIAGFFIDHANTTGRQTQGGVIVSVDFTVEEIANLIGSSRQTTSTALNSLI 55 (80)
T ss_dssp HHHHHHHHHHHTCBCCCSCC--CCCCEECCCHHHHHHHHCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCeEEecCCCHHHHHHHHCCCHHHHHHHHHHHH
Confidence 67788888877644 45788999999999999999998754
No 5
>d1zyba1 a.4.5.4 (A:148-220) Probable transcription regulator BT4300, C-terminal domain {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=95.36 E-value=0.011 Score=33.78 Aligned_cols=43 Identities=16% Similarity=0.245 Sum_probs=35.0
Q ss_pred ccHHHHHHHHHHHhhcC--------cchhhhhhccccchhhHHHHHHHHHH
Q 036324 45 VSIEEQLCMFLHILAHH--------VKSRTIHSRFLRSRETISRYFNLVLN 87 (91)
Q Consensus 45 v~veE~vamFL~i~~~~--------~~~r~i~~~F~~S~eTisr~f~~Vl~ 87 (91)
.+++++||=||...+.. .+..++++..|.|++||||.+++.-+
T Consensus 3 ~dv~~Rla~~Ll~~~~~~~~~~~i~lt~~elA~~lg~sr~tvsr~l~~l~~ 53 (73)
T d1zyba1 3 LDLKSKIIRFFLSHCEKPQGEKTFKVKMDDLARCLDDTRLNISKTLNELQD 53 (73)
T ss_dssp CSHHHHHHHHHHTTCSSSSSCEEEECCHHHHHHHHTSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhhhhCCCeEeecCHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 36788888888776542 47889999999999999999987643
No 6
>d2gaua1 a.4.5.4 (A:152-232) Transcriptional regulator PG0396, C-terminal domain {Porphyromonas gingivalis [TaxId: 837]}
Probab=95.21 E-value=0.013 Score=33.38 Aligned_cols=41 Identities=12% Similarity=0.108 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHhhc-------------CcchhhhhhccccchhhHHHHHHHHHH
Q 036324 47 IEEQLCMFLHILAH-------------HVKSRTIHSRFLRSRETISRYFNLVLN 87 (91)
Q Consensus 47 veE~vamFL~i~~~-------------~~~~r~i~~~F~~S~eTisr~f~~Vl~ 87 (91)
|+++||-+|+.++. +.+..++++.-|-|++||||.+++.-+
T Consensus 2 v~~Rla~~Ll~l~~~~g~~~~~~~i~~~lt~~eLA~~~G~sretvsr~L~~l~~ 55 (81)
T d2gaua1 2 VRGRLAETLLILKENFGFENDGATLSIYLSREELATLSNMTVSNAIRTLSTFVS 55 (81)
T ss_dssp HHHHHHHHHHHHHHHHCBCTTSSBBSCCCCHHHHHHHTTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCEEeecCCHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 56777777776552 357889999999999999999987543
No 7
>d1l3la1 a.4.6.2 (A:170-234) Quorum-sensing transcription factor TraR, C-terminal domain {Agrobacterium tumefaciens [TaxId: 358]}
Probab=93.19 E-value=0.055 Score=29.81 Aligned_cols=35 Identities=9% Similarity=-0.032 Sum_probs=31.2
Q ss_pred HHHhhcCcchhhhhhccccchhhHHHHHHHHHHHH
Q 036324 55 LHILAHHVKSRTIHSRFLRSRETISRYFNLVLNAI 89 (91)
Q Consensus 55 L~i~~~~~~~r~i~~~F~~S~eTisr~f~~Vl~ai 89 (91)
|..++.|.++..|+...+.|..||..|...+.+.+
T Consensus 13 l~l~~~G~s~~eIA~~l~iS~~TV~~~~~~i~~Kl 47 (65)
T d1l3la1 13 LRWIAVGKTMEEIADVEGVKYNSVRVKLREAMKRF 47 (65)
T ss_dssp HHHHTTTCCHHHHHHHHTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHHHCCCHHHHHHHHHHHHHHc
Confidence 45678899999999999999999999999988754
No 8
>d2zcwa1 a.4.5.4 (A:118-199) Transcriptional regulator TTHA1359, C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=93.11 E-value=0.068 Score=30.41 Aligned_cols=40 Identities=13% Similarity=0.203 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHhhcC-------------cchhhhhhccccchhhHHHHHHHHH
Q 036324 47 IEEQLCMFLHILAHH-------------VKSRTIHSRFLRSRETISRYFNLVL 86 (91)
Q Consensus 47 veE~vamFL~i~~~~-------------~~~r~i~~~F~~S~eTisr~f~~Vl 86 (91)
++.+||-+|+.++.. .+..++++.-|-|.+||+|.+++.-
T Consensus 2 ~~~Rla~~Ll~l~~~~~~~~~~g~i~i~lt~~elA~~lg~sr~tv~r~L~~l~ 54 (82)
T d2zcwa1 2 LKNRMAAALLELSETPLAHEEEGKVVLKATHDELAAAVGSVRETVTKVIGELA 54 (82)
T ss_dssp HHHHHHHHHHHHTTSTTEEEETTEEEEECCHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCeEeecCCHHHHHHHHCCCHHHHHHHHHHHH
Confidence 567788888887543 3778999999999999999998753
No 9
>d1a04a1 a.4.6.2 (A:150-216) Nitrate/nitrite response regulator (NarL) {Escherichia coli [TaxId: 562]}
Probab=92.89 E-value=0.064 Score=29.71 Aligned_cols=34 Identities=15% Similarity=0.266 Sum_probs=30.2
Q ss_pred HHhhcCcchhhhhhccccchhhHHHHHHHHHHHH
Q 036324 56 HILAHHVKSRTIHSRFLRSRETISRYFNLVLNAI 89 (91)
Q Consensus 56 ~i~~~~~~~r~i~~~F~~S~eTisr~f~~Vl~ai 89 (91)
-.++.|.++.+|+...+.|..||..|...+++.+
T Consensus 16 ~ll~~G~s~~eIA~~l~iS~~TV~~~~~~i~~Kl 49 (67)
T d1a04a1 16 KLIAQGLPNKMIARRLDITESTVKVHVKHMLKKM 49 (67)
T ss_dssp HHHHTTCCHHHHHHHHTCCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCHHHHHHHHCCCHHHHHHHHHHHHHHh
Confidence 3466889999999999999999999999988765
No 10
>d1fsea_ a.4.6.2 (A:) Germination protein GerE {Bacillus subtilis [TaxId: 1423]}
Probab=92.67 E-value=0.072 Score=29.37 Aligned_cols=34 Identities=15% Similarity=0.305 Sum_probs=30.2
Q ss_pred HHhhcCcchhhhhhccccchhhHHHHHHHHHHHH
Q 036324 56 HILAHHVKSRTIHSRFLRSRETISRYFNLVLNAI 89 (91)
Q Consensus 56 ~i~~~~~~~r~i~~~F~~S~eTisr~f~~Vl~ai 89 (91)
--++.|.++.+|+...+.|..||..|...+.+.+
T Consensus 14 ~l~~~G~s~~eIA~~L~is~~TV~~~~~~i~~Kl 47 (67)
T d1fsea_ 14 ELLVQDKTTKEIASELFISEKTVRNHISNAMQKL 47 (67)
T ss_dssp HHHTTTCCHHHHHHHHTSCHHHHHHHHHHHHHHH
T ss_pred HHHHccCCHHHHHHHHCCCHHHHHHHHHHHHHHc
Confidence 3477999999999999999999999999988754
No 11
>d1rp3a2 a.4.13.2 (A:164-234) Sigma factor sigma-28 (FliA) {Aquifex aeolicus [TaxId: 63363]}
Probab=92.63 E-value=0.15 Score=27.74 Aligned_cols=45 Identities=13% Similarity=0.171 Sum_probs=36.2
Q ss_pred CccHHHHHHHHHHHhhcCcchhhhhhccccchhhHHHHHHHHHHHH
Q 036324 44 TVSIEEQLCMFLHILAHHVKSRTIHSRFLRSRETISRYFNLVLNAI 89 (91)
Q Consensus 44 ~v~veE~vamFL~i~~~~~~~r~i~~~F~~S~eTisr~f~~Vl~ai 89 (91)
..|..++-++-|+. -.+.++..|+..+|.|.+||++..+..++.+
T Consensus 21 ~L~~~~r~v~~l~~-~~~~s~~eIA~~lgis~~tv~~~~~ra~~~L 65 (71)
T d1rp3a2 21 KLPEREKLVIQLIF-YEELPAKEVAKILETSVSRVSQLKAKALERL 65 (71)
T ss_dssp TSCHHHHHHHHHHH-TSCCCHHHHHHHTTSCHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH-hHhCCHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 35666666655554 5789999999999999999999998877654
No 12
>d1yioa1 a.4.6.2 (A:131-200) Response regulatory protein StyR, C-terminal domain {Pseudomonas fluorescens [TaxId: 294]}
Probab=92.61 E-value=0.065 Score=30.02 Aligned_cols=32 Identities=6% Similarity=0.058 Sum_probs=29.2
Q ss_pred hhcCcchhhhhhccccchhhHHHHHHHHHHHH
Q 036324 58 LAHHVKSRTIHSRFLRSRETISRYFNLVLNAI 89 (91)
Q Consensus 58 ~~~~~~~r~i~~~F~~S~eTisr~f~~Vl~ai 89 (91)
++.|.++..|+...+.|..||..|...+...+
T Consensus 24 l~~G~s~~eIA~~l~iS~~TV~~~~~~i~~Kl 55 (70)
T d1yioa1 24 TIRGLMNKQIAGELGIAEVTVKVHRHNIMQKL 55 (70)
T ss_dssp HTTTCCHHHHHHHHTCCHHHHHHHHHHHHHHT
T ss_pred HHcCCCHHHHHHHHCCCHHHHHHHHHHHHHHc
Confidence 67899999999999999999999999988764
No 13
>d1k78a1 a.4.1.5 (A:19-81) Pax-5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.57 E-value=0.15 Score=28.53 Aligned_cols=44 Identities=9% Similarity=0.013 Sum_probs=32.4
Q ss_pred CCCCCccHHHHHHHHHHHhhcCcchhhhhhccccchhhHHHHHHH
Q 036324 40 KADGTVSIEEQLCMFLHILAHHVKSRTIHSRFLRSRETISRYFNL 84 (91)
Q Consensus 40 ~~s~~v~veE~vamFL~i~~~~~~~r~i~~~F~~S~eTisr~f~~ 84 (91)
.+.+..|++-.--|.=. +..+.|-|+|+.+|++|..||+++.+.
T Consensus 10 ~~GrPls~DLR~Riv~~-~~~G~s~r~aA~rf~VS~s~v~k~l~r 53 (63)
T d1k78a1 10 VNGRPLPDVVRQRIVEL-AHQGVRPCDISRQLRVSHGCVSKILGR 53 (63)
T ss_dssp CTTSCCCHHHHHHHHHH-HHTTCCHHHHHHHHTCCHHHHHHHHHH
T ss_pred cCCCcCCHHHHHHHHHH-HHcCCCHHHHHHHhCCCHHHHHHHHHH
Confidence 34555666555444433 347899999999999999999998765
No 14
>d1vz0a1 a.4.14.1 (A:116-208) Putative partitioning protein ParB/Spo0J {Thermus thermophilus [TaxId: 274]}
Probab=91.94 E-value=0.088 Score=31.33 Aligned_cols=37 Identities=14% Similarity=0.193 Sum_probs=31.7
Q ss_pred cHHHHHHHHHHHhhcCcchhhhhhccccchhhHHHHHH
Q 036324 46 SIEEQLCMFLHILAHHVKSRTIHSRFLRSRETISRYFN 83 (91)
Q Consensus 46 ~veE~vamFL~i~~~~~~~r~i~~~F~~S~eTisr~f~ 83 (91)
++||+.|.=-.+ -.|.+...|+.++|.|++||+...+
T Consensus 5 piEeA~a~~~L~-e~g~t~~~iA~~~Gks~~~V~~~Lr 41 (93)
T d1vz0a1 5 PVEEARGYQALL-EMGLTQEEVARRVGKARSTVANALR 41 (93)
T ss_dssp HHHHHHHHHHHH-HTTCCHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HcCCCHHHHHHHHccchHHHHHHHH
Confidence 688888876555 7889999999999999999998764
No 15
>d3e5ua1 a.4.5.4 (A:148-227) Chlorophenol reduction protein CprK {Desulfitobacterium hafniense [TaxId: 49338]}
Probab=91.81 E-value=0.098 Score=29.50 Aligned_cols=41 Identities=12% Similarity=0.048 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHhhc--------------CcchhhhhhccccchhhHHHHHHHHHH
Q 036324 47 IEEQLCMFLHILAH--------------HVKSRTIHSRFLRSRETISRYFNLVLN 87 (91)
Q Consensus 47 veE~vamFL~i~~~--------------~~~~r~i~~~F~~S~eTisr~f~~Vl~ 87 (91)
+.++||-+|+.++. +.+..++++.-|.|++||+|.+++.-+
T Consensus 2 ~~~Rla~~L~~L~~~~g~~~~~~~~i~~~lt~~elA~~~g~sretvsr~l~~l~~ 56 (80)
T d3e5ua1 2 PTIRILRLFYELCSSQGKRVGDTYEITMPLSQKSIGEITGVHHVTVSRVLASLKR 56 (80)
T ss_dssp HHHHHHHHHHHHHHHHCEEETTEEECCSCCCHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCeEEeeCCCHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 35566666665432 246788999999999999999988654
No 16
>d2bgca1 a.4.5.4 (A:138-237) Listeriolysin regulatory protein PrfA, C-terminal domain {Bacteria (Listeria monocytogenes) [TaxId: 1639]}
Probab=91.70 E-value=0.093 Score=31.55 Aligned_cols=26 Identities=8% Similarity=0.045 Sum_probs=22.2
Q ss_pred Ccchhhhhhccccc-hhhHHHHHHHHH
Q 036324 61 HVKSRTIHSRFLRS-RETISRYFNLVL 86 (91)
Q Consensus 61 ~~~~r~i~~~F~~S-~eTisr~f~~Vl 86 (91)
+.+..++++.-|-| ++||||.+++.-
T Consensus 31 ~lTqeeLA~~lG~s~ReTVsR~L~~L~ 57 (100)
T d2bgca1 31 NLTMQELGYSSGIAHSSAVSRIISKLK 57 (100)
T ss_dssp CCCHHHHHHHTTCCCHHHHHHHHHHHH
T ss_pred ccCHHHHHHHhCCchHHHHHHHHHHHH
Confidence 36889999999997 899999998753
No 17
>d1r1ua_ a.4.5.5 (A:) Metal-sensing transcriptional repressor CzrA {Staphylococcus aureus [TaxId: 1280]}
Probab=91.56 E-value=0.42 Score=27.97 Aligned_cols=57 Identities=12% Similarity=0.202 Sum_probs=42.3
Q ss_pred CHHHHHHHHHHHHhCCCCCCCCCccHHHHHHHHHHHhhcCcchhhhhhccccchhhHHHHHHHHHH
Q 036324 22 DKRTFELLCGLLRINGGLKADGTVSIEEQLCMFLHILAHHVKSRTIHSRFLRSRETISRYFNLVLN 87 (91)
Q Consensus 22 ~~~~F~~L~~~L~~~~~l~~s~~v~veE~vamFL~i~~~~~~~r~i~~~F~~S~eTisr~f~~Vl~ 87 (91)
+.+++.++.+.++. |.| .-++.|..+......+..++...++-|.+|||+|+...-+
T Consensus 1 n~d~~e~~a~~fka---L~d------~~Rl~Il~~L~~~~~~v~el~~~l~~s~~~vS~HL~~L~~ 57 (94)
T d1r1ua_ 1 NTDTLERVTEIFKA---LGD------YNRIRIMELLSVSEASVGHISHQLNLSQSNVSHQLKLLKS 57 (94)
T ss_dssp CHHHHHHHHHHHHH---TCS------HHHHHHHHHHHHCCBCHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHH---hCC------HHHHHHHHHHHcCCccHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 35677788888875 333 3345565555566788999999999999999999986544
No 18
>d1r1ta_ a.4.5.5 (A:) SmtB repressor {Cyanobacteria (Synechococcus), pcc7942 [TaxId: 1129]}
Probab=91.20 E-value=0.41 Score=28.18 Aligned_cols=58 Identities=10% Similarity=0.134 Sum_probs=43.1
Q ss_pred CCHHHHHHHHHHHHhCCCCCCCCCccHHHHHHHHHHHhhcCcchhhhhhccccchhhHHHHHHHHHH
Q 036324 21 MDKRTFELLCGLLRINGGLKADGTVSIEEQLCMFLHILAHHVKSRTIHSRFLRSRETISRYFNLVLN 87 (91)
Q Consensus 21 M~~~~F~~L~~~L~~~~~l~~s~~v~veE~vamFL~i~~~~~~~r~i~~~F~~S~eTisr~f~~Vl~ 87 (91)
+.++++..|.+.|+. |.+ .-++.|.-.......+..++++.++-|++|||.|....-+
T Consensus 5 ~~pe~~~~la~~~ka---L~~------p~Rl~Il~~L~~~~~~v~ela~~l~is~stvS~HL~~L~~ 62 (98)
T d1r1ta_ 5 IAPEVAQSLAEFFAV---LAD------PNRLRLLSLLARSELCVGDLAQAIGVSESAVSHQLRSLRN 62 (98)
T ss_dssp CCHHHHHHHHHHHHH---HCC------HHHHHHHHHHTTCCBCHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH---hCC------HHHHHHHHHHHcCCcCHHHHHHHHCcCHHHHHHHHHHHHH
Confidence 567788888888875 333 2345555444556789999999999999999999876544
No 19
>d1pdnc_ a.4.1.5 (C:) Paired protein (prd) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=91.18 E-value=0.18 Score=31.11 Aligned_cols=44 Identities=14% Similarity=0.120 Sum_probs=34.4
Q ss_pred CCCCCccHHHHHHHHHHHhhcCcchhhhhhccccchhhHHHHHHH
Q 036324 40 KADGTVSIEEQLCMFLHILAHHVKSRTIHSRFLRSRETISRYFNL 84 (91)
Q Consensus 40 ~~s~~v~veE~vamFL~i~~~~~~~r~i~~~F~~S~eTisr~f~~ 84 (91)
.+.+..|.+-...|--.. -.|.+.|+|+.+|+.|..||++++..
T Consensus 12 ~~GrpLs~dlR~rIv~~~-~~G~s~r~iA~~~~VS~~tV~k~l~r 55 (123)
T d1pdnc_ 12 INGRPLPNNIRLKIVEMA-ADGIRPCVISRQLRVSHGCVSKILNR 55 (123)
T ss_dssp ETTSCCCHHHHHHHHHHH-HTTCCHHHHHHHHTCCHHHHHHHHHH
T ss_pred cCCcCCCHHHHHHHHHHH-HhcCCHHHHHHHHCcCHHHHHHHHHH
Confidence 345667777766665543 56889999999999999999998875
No 20
>d1j1va_ a.4.12.2 (A:) Chromosomal replication initiation factor DnaA C-terminal domain IV {Escherichia coli [TaxId: 562]}
Probab=90.73 E-value=0.24 Score=29.13 Aligned_cols=46 Identities=17% Similarity=0.099 Sum_probs=39.8
Q ss_pred CCccHHHHHHHHHHHhhcCcchhhhhhccc-cchhhHHHHHHHHHHH
Q 036324 43 GTVSIEEQLCMFLHILAHHVKSRTIHSRFL-RSRETISRYFNLVLNA 88 (91)
Q Consensus 43 ~~v~veE~vamFL~i~~~~~~~r~i~~~F~-~S~eTisr~f~~Vl~a 88 (91)
+.+..--|+||||-.--.+.++.+|+..|| ++-+||.--.+.|=+.
T Consensus 28 ~~iv~aR~va~yL~r~~~~~sl~~Ig~~fg~rdHsTV~~a~kki~~~ 74 (94)
T d1j1va_ 28 RSVARPRQMAMALAKELTNHSLPEIGDAFGGRDHTTVLHACRKIEQL 74 (94)
T ss_dssp HHHHHHHHHHHHHHHHHSCCCHHHHHHHTTSCCHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHhCCCHHHHHHHhCCCCchHHHHHHHHHHHH
Confidence 467778999999999999999999999995 9999998888776543
No 21
>d1l8qa1 a.4.12.2 (A:290-399) Chromosomal replication initiation factor DnaA C-terminal domain IV {Aquifex aeolicus [TaxId: 63363]}
Probab=90.65 E-value=0.19 Score=30.56 Aligned_cols=45 Identities=16% Similarity=0.144 Sum_probs=39.0
Q ss_pred CCccHHHHHHHHHHHhhcCcchhhhhhccc-cchhhHHHHHHHHHH
Q 036324 43 GTVSIEEQLCMFLHILAHHVKSRTIHSRFL-RSRETISRYFNLVLN 87 (91)
Q Consensus 43 ~~v~veE~vamFL~i~~~~~~~r~i~~~F~-~S~eTisr~f~~Vl~ 87 (91)
+.+.---|+||+|-.--.+.++..|+..|| ++..||..-++.|=+
T Consensus 41 ~~vv~aR~ia~yL~r~~t~~sl~~IG~~fg~rdHsTV~~a~kki~~ 86 (110)
T d1l8qa1 41 KRTSEARKIAMYLCRKVCSASLIEIARAFKRKDHTTVIHAIRSVEE 86 (110)
T ss_dssp SSSHHHHHHHHHHHHHHHCCCHHHHHHHSSCCCSTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHhCCCCccHHHHHHHHHHH
Confidence 467788899999988888999999999996 999999988877643
No 22
>d2hsga1 a.35.1.5 (A:2-58) Glucose-resistance amylase regulator CcpA, N-terminal domain {Bacillus megaterium [TaxId: 1404]}
Probab=90.39 E-value=0.063 Score=29.49 Aligned_cols=23 Identities=26% Similarity=0.190 Sum_probs=20.6
Q ss_pred CcchhhhhhccccchhhHHHHHH
Q 036324 61 HVKSRTIHSRFLRSRETISRYFN 83 (91)
Q Consensus 61 ~~~~r~i~~~F~~S~eTisr~f~ 83 (91)
|.+-++|+..-|.|..||||.++
T Consensus 1 NvTi~dvA~~agvS~~TVSr~Ln 23 (57)
T d2hsga1 1 NVTIYDVAREASVSMATVSRVVN 23 (57)
T ss_dssp CCCHHHHHHHTTSCHHHHHHHHT
T ss_pred CcCHHHHHHHHCcCHHHHHHHhC
Confidence 56778999999999999999986
No 23
>d1qpza1 a.35.1.5 (A:2-58) Purine repressor (PurR), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=89.27 E-value=0.095 Score=28.73 Aligned_cols=22 Identities=23% Similarity=0.194 Sum_probs=19.4
Q ss_pred chhhhhhccccchhhHHHHHHH
Q 036324 63 KSRTIHSRFLRSRETISRYFNL 84 (91)
Q Consensus 63 ~~r~i~~~F~~S~eTisr~f~~ 84 (91)
+.++|+..-|.|..||||.++.
T Consensus 2 Ti~dvA~~agVS~sTVSr~ln~ 23 (57)
T d1qpza1 2 TIKDVAKRANVSTTTVSHVINK 23 (57)
T ss_dssp CHHHHHHHHTSCHHHHHHHHHT
T ss_pred CHHHHHHHHCcCHHHHHHHHCC
Confidence 5678999999999999999874
No 24
>d1p4wa_ a.4.6.2 (A:) Transcriptional regulator RcsB {Erwinia amylovora [TaxId: 552]}
Probab=88.53 E-value=0.23 Score=28.72 Aligned_cols=44 Identities=20% Similarity=0.197 Sum_probs=34.1
Q ss_pred CccHHHHHHHHHHHhhcCcchhhhhhccccchhhHHHHHHHHHHHH
Q 036324 44 TVSIEEQLCMFLHILAHHVKSRTIHSRFLRSRETISRYFNLVLNAI 89 (91)
Q Consensus 44 ~v~veE~vamFL~i~~~~~~~r~i~~~F~~S~eTisr~f~~Vl~ai 89 (91)
..|.-|.=.+ ..++.|.++..|+...+.|..||..+...+...+
T Consensus 22 ~LT~rE~~vl--~ll~~G~s~~eIA~~l~iS~~TV~~~~~~i~~Kl 65 (87)
T d1p4wa_ 22 RLSPKESEVL--RLFAEGFLVTEIAKKLNRSIKTISSQKKSAMMKL 65 (87)
T ss_dssp SCCHHHHHHH--HHHHHTCCHHHHHHHHTSCHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHH--HHHHcCCCHHHHHHHhCCCHHHHHHHHHHHHHHc
Confidence 4555554333 3456789999999999999999999999887654
No 25
>d1s7oa_ a.4.13.3 (A:) Hypothetical protein SPy1201 {Streptococcus pyogenes [TaxId: 1314]}
Probab=88.01 E-value=0.43 Score=28.83 Aligned_cols=44 Identities=14% Similarity=0.083 Sum_probs=34.8
Q ss_pred ccHHHHHHHHHHHhhcCcchhhhhhccccchhhHHHHHHHHHHHH
Q 036324 45 VSIEEQLCMFLHILAHHVKSRTIHSRFLRSRETISRYFNLVLNAI 89 (91)
Q Consensus 45 v~veE~vamFL~i~~~~~~~r~i~~~F~~S~eTisr~f~~Vl~ai 89 (91)
.|-.++-++-|+ .-.+.++..|+...|.|..||+..++.....+
T Consensus 17 Lp~~qR~v~~L~-y~~~ls~~EIA~~lgiS~~aV~~~l~RA~~~L 60 (106)
T d1s7oa_ 17 LTDKQMNYIELY-YADDYSLAEIADEFGVSRQAVYDNIKRTEKIL 60 (106)
T ss_dssp SCHHHHHHHHHH-HHTCCCHHHHHHHHTCCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHH-HHcCCCHHHHHHHHCcCHHHHHHHHHHHHHHH
Confidence 444555555554 45799999999999999999999999877665
No 26
>d2jn6a1 a.4.1.19 (A:1-89) Uncharacterized protein Cgl2762 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=87.69 E-value=0.21 Score=28.80 Aligned_cols=42 Identities=17% Similarity=-0.002 Sum_probs=31.3
Q ss_pred CccHHHHHHHH-HHHhhcCcchhhhhhccccchhhHHHHHHHH
Q 036324 44 TVSIEEQLCMF-LHILAHHVKSRTIHSRFLRSRETISRYFNLV 85 (91)
Q Consensus 44 ~v~veE~vamF-L~i~~~~~~~r~i~~~F~~S~eTisr~f~~V 85 (91)
.-|.|-+.-+- |+.-+.|.+.+.|+..||.|.+||+++.++.
T Consensus 5 ~Ys~EfK~~aV~l~~~~~g~s~~~vA~~lGIs~~tl~~W~k~~ 47 (89)
T d2jn6a1 5 TYSEEFKRDAVALYENSDGASLQQIANDLGINRVTLKNWIIKY 47 (89)
T ss_dssp CCCHHHHHHHHHHHTTGGGSCHHHHHHHHTSCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCcHHHHHHHHCCCHHHHHHHHHHH
Confidence 45556444433 4444568999999999999999999998763
No 27
>d1aisb1 a.74.1.2 (B:1108-1205) Transcription factor IIB (TFIIB), core domain {Archaeon Pyrococcus woesei [TaxId: 2262]}
Probab=87.49 E-value=1.5 Score=25.03 Aligned_cols=75 Identities=16% Similarity=0.097 Sum_probs=53.0
Q ss_pred HHHHhCCCHHHHHHHHHHHHhCCCCCCCCCccHHHHHHHHHHH----hhcCcchhhhhhccccchhhHHHHHHHHHHHH
Q 036324 15 CVNQLRMDKRTFELLCGLLRINGGLKADGTVSIEEQLCMFLHI----LAHHVKSRTIHSRFLRSRETISRYFNLVLNAI 89 (91)
Q Consensus 15 c~~~fRM~~~~F~~L~~~L~~~~~l~~s~~v~veE~vamFL~i----~~~~~~~r~i~~~F~~S~eTisr~f~~Vl~ai 89 (91)
.-+.++++.++-..-.++.+.-....-+++-+..--.|--+|+ .+.+-+.++|++-++.|..||.+.++++++.+
T Consensus 12 ~~~~L~L~~~i~~~A~~i~k~~~~~~~~~g~~~~~iaaA~iY~Acr~~~~~~t~~eIa~~~~is~~ti~k~yk~i~~~L 90 (98)
T d1aisb1 12 ITAQLKLPRHVEEEAARLYREAVRKGLIRGRSIESVMAACVYAACRLLKVPRTLDEIADIARVDKKEIGRSYRFIARNL 90 (98)
T ss_dssp HHHHHTCCHHHHHHHHHHHHHHHTTTTTTTCCHHHHHHHHHHHHHHHHTCCCCHHHHHHHTTSCHHHHHHHHHHHHHHT
T ss_pred HHHHcCcCHHHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHcCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHc
Confidence 3356677766655555555443333444556666677777776 45668889999999999999999999988754
No 28
>d1biaa1 a.4.5.1 (A:1-63) Biotin repressor, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=87.11 E-value=0.29 Score=26.68 Aligned_cols=24 Identities=13% Similarity=0.159 Sum_probs=21.4
Q ss_pred cchhhhhhccccchhhHHHHHHHH
Q 036324 62 VKSRTIHSRFLRSRETISRYFNLV 85 (91)
Q Consensus 62 ~~~r~i~~~F~~S~eTisr~f~~V 85 (91)
.+..++++.|+.|..||+|++...
T Consensus 20 ~s~~eLa~~l~vS~~ti~r~i~~L 43 (63)
T d1biaa1 20 HSGEQLGETLGMSRAAINKHIQTL 43 (63)
T ss_dssp BCHHHHHHHHTSCHHHHHHHHHHH
T ss_pred CCHHHHHHHHCcCHHHHHHHHHHH
Confidence 577889999999999999999874
No 29
>d2d1ha1 a.4.5.50 (A:1-109) Hypothetical transcriptional regulator ST1889 {Sulfolobus tokodaii [TaxId: 111955]}
Probab=85.89 E-value=0.44 Score=27.87 Aligned_cols=28 Identities=14% Similarity=0.278 Sum_probs=23.5
Q ss_pred cCcchhhhhhccccchhhHHHHHHHHHH
Q 036324 60 HHVKSRTIHSRFLRSRETISRYFNLVLN 87 (91)
Q Consensus 60 ~~~~~r~i~~~F~~S~eTisr~f~~Vl~ 87 (91)
.+.+..+|++.++.|++||++......+
T Consensus 35 ~~~t~~eLa~~~~i~~~tvs~~l~~L~~ 62 (109)
T d2d1ha1 35 KPITSEELADIFKLSKTTVENSLKKLIE 62 (109)
T ss_dssp SCEEHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHCccHhHHHHHHHHHHH
Confidence 3467788999999999999999887654
No 30
>d1efaa1 a.35.1.5 (A:2-60) Lac repressor (LacR), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=85.52 E-value=0.19 Score=27.62 Aligned_cols=22 Identities=27% Similarity=0.138 Sum_probs=19.5
Q ss_pred cchhhhhhccccchhhHHHHHH
Q 036324 62 VKSRTIHSRFLRSRETISRYFN 83 (91)
Q Consensus 62 ~~~r~i~~~F~~S~eTisr~f~ 83 (91)
.+..+|+..-|.|..||||.++
T Consensus 3 ~Ti~diA~~agvS~sTVSr~l~ 24 (59)
T d1efaa1 3 VTLYDVAEYAGVSYQTVSRVVN 24 (59)
T ss_dssp CCHHHHHHTTTSCHHHHHHHHT
T ss_pred CCHHHHHHHHCCCHHHHHHHHC
Confidence 4568899999999999999986
No 31
>d1j5ya1 a.4.5.1 (A:3-67) Putative transcriptional regulator TM1602, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=84.40 E-value=0.64 Score=25.17 Aligned_cols=24 Identities=17% Similarity=0.232 Sum_probs=21.8
Q ss_pred cchhhhhhccccchhhHHHHHHHH
Q 036324 62 VKSRTIHSRFLRSRETISRYFNLV 85 (91)
Q Consensus 62 ~~~r~i~~~F~~S~eTisr~f~~V 85 (91)
.+-.++++.|+.|..||.|.+.+.
T Consensus 23 vs~~~La~~l~VS~~TI~rdi~~L 46 (65)
T d1j5ya1 23 VSGAQLAEELSVSRQVIVQDIAYL 46 (65)
T ss_dssp BCHHHHHHHHTSCHHHHHHHHHHH
T ss_pred CcHHHHHHHHCCCHHHHHHHHHHH
Confidence 688899999999999999999874
No 32
>d1yu8x1 a.14.1.1 (X:42-76) Villin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=83.86 E-value=0.25 Score=24.66 Aligned_cols=23 Identities=22% Similarity=0.128 Sum_probs=19.8
Q ss_pred ChhHHHHHhCCCHHHHHHHHHHH
Q 036324 11 SDIECVNQLRMDKRTFELLCGLL 33 (91)
Q Consensus 11 ~~~~c~~~fRM~~~~F~~L~~~L 33 (91)
+|.+....|+|+++.|.+|-.+=
T Consensus 2 sd~dF~~vfgmsr~eF~~LP~WK 24 (35)
T d1yu8x1 2 SDEDFKAVFGMTRSAFANLPLWK 24 (35)
T ss_dssp CHHHHHHHHSSCHHHHHTSCHHH
T ss_pred CHHHHHHHHCCCHHHHHHCcHhH
Confidence 57899999999999999986653
No 33
>d1unda_ a.14.1.1 (A:) Advillin {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.68 E-value=0.34 Score=24.25 Aligned_cols=23 Identities=22% Similarity=0.340 Sum_probs=19.9
Q ss_pred ChhHHHHHhCCCHHHHHHHHHHH
Q 036324 11 SDIECVNQLRMDKRTFELLCGLL 33 (91)
Q Consensus 11 ~~~~c~~~fRM~~~~F~~L~~~L 33 (91)
+|.+....|+|+++.|.+|-.+=
T Consensus 3 sd~dF~~vFgmsr~eF~~LP~WK 25 (36)
T d1unda_ 3 SEQDFVSVFGITRGQFAALPGWK 25 (36)
T ss_dssp CHHHHHHHHSSCHHHHHHSCHHH
T ss_pred CHHHHHHHHCcCHHHHHHCcHHH
Confidence 68899999999999999986653
No 34
>d1vola1 a.74.1.2 (A:113-207) Transcription factor IIB (TFIIB), core domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.11 E-value=2.6 Score=23.83 Aligned_cols=75 Identities=17% Similarity=0.169 Sum_probs=49.9
Q ss_pred HHHHhCCCHHHHHHHHHHHHhCCCCCCCCCccHHHHHHHHHHHh----hcCcchhhhhhccccchhhHHHHHHHHHHHH
Q 036324 15 CVNQLRMDKRTFELLCGLLRINGGLKADGTVSIEEQLCMFLHIL----AHHVKSRTIHSRFLRSRETISRYFNLVLNAI 89 (91)
Q Consensus 15 c~~~fRM~~~~F~~L~~~L~~~~~l~~s~~v~veE~vamFL~i~----~~~~~~r~i~~~F~~S~eTisr~f~~Vl~ai 89 (91)
.-+.+++++.+-..-..+.+.-....-.++-+.+--.|--+|+. +.+-+.++|++-|+.|..||.+.++.+.+.+
T Consensus 12 ~~~~L~L~~~i~~~A~~i~~~~~~~~~~~Gr~~~~i~AA~iY~acr~~~~p~t~~eIa~~~~i~~~~i~k~~k~i~~~L 90 (95)
T d1vola1 12 MADRINLPRNKVDRTNNLFRQAYEQKSLKGRANDAIASACLYIACRQEGVPRTFKEICAVSRISKKEIGRCFKLILKAL 90 (95)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHHHTCCCTTSCHHHHHHHHHHHHHHHTTCCCCHHHHHTTTCSCHHHHHHHHHHHHHHT
T ss_pred HHHHcCcCHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHcCCCCCHHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 34556777665555444444322222234455566666666664 4567899999999999999999999987654
No 35
>d1uxda_ a.35.1.5 (A:) Fructose repressor (FruR), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=82.52 E-value=0.33 Score=26.50 Aligned_cols=21 Identities=33% Similarity=0.088 Sum_probs=18.3
Q ss_pred chhhhhhccccchhhHHHHHH
Q 036324 63 KSRTIHSRFLRSRETISRYFN 83 (91)
Q Consensus 63 ~~r~i~~~F~~S~eTisr~f~ 83 (91)
+-.+|+..-|.|..||||.++
T Consensus 2 Tl~diA~~agvS~sTVSrvLn 22 (59)
T d1uxda_ 2 KLDEIARLAGVSRTTASYVIN 22 (59)
T ss_dssp CHHHHHHHHTSCTTHHHHHHH
T ss_pred CHHHHHHHHCcCHHHHHHHHc
Confidence 356889999999999999997
No 36
>d1d5ya1 a.4.1.8 (A:3-56) Rob transcription factor, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=82.32 E-value=0.54 Score=24.34 Aligned_cols=27 Identities=15% Similarity=0.143 Sum_probs=22.6
Q ss_pred cCcchhhhhhccccchhhHHHHHHHHH
Q 036324 60 HHVKSRTIHSRFLRSRETISRYFNLVL 86 (91)
Q Consensus 60 ~~~~~r~i~~~F~~S~eTisr~f~~Vl 86 (91)
.+.+-.+++..++.|..+++|.|++..
T Consensus 18 ~~itl~~lA~~~~~S~~~l~r~Fk~~~ 44 (54)
T d1d5ya1 18 QPLSLDNVAAKAGYSKWHLQRMFKDVT 44 (54)
T ss_dssp SSCCCHHHHTTTSSCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHCcCHHHHHHHHHHHH
Confidence 345666789999999999999999875
No 37
>d1ku9a_ a.4.5.36 (A:) DNA-binding protein Mj223 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=82.27 E-value=1.8 Score=25.85 Aligned_cols=59 Identities=14% Similarity=0.070 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHhCCCCCCCCCccHHHHHHHHHHHhhcCcchhhhhhccccchhhHHHHHHHHHH
Q 036324 24 RTFELLCGLLRINGGLKADGTVSIEEQLCMFLHILAHHVKSRTIHSRFLRSRETISRYFNLVLN 87 (91)
Q Consensus 24 ~~F~~L~~~L~~~~~l~~s~~v~veE~vamFL~i~~~~~~~r~i~~~F~~S~eTisr~f~~Vl~ 87 (91)
..|......+-..+|+.. .+=++-..|+.-+.+.+..+|++..+.|++|||+..+...+
T Consensus 9 ~~~~~~~~~~~~~~Gl~~-----~~~~i~~~L~~~~~plt~~ela~~l~vsk~~vs~~l~~L~~ 67 (151)
T d1ku9a_ 9 KLIIELFSELAKIHGLNK-----SVGAVYAILYLSDKPLTISDIMEELKISKGNVSMSLKKLEE 67 (151)
T ss_dssp HHHHHHHHHHHHHTTCCH-----HHHHHHHHHHHCSSCEEHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCH-----HHHHHHHHHHhCCCCcCHHHHHHHhCCCcchHHHHHHHHHH
Confidence 344444444444466654 33345555665555689999999999999999999887654
No 38
>d1jhga_ a.4.12.1 (A:) Trp repressor, TrpR {Escherichia coli [TaxId: 562]}
Probab=81.32 E-value=0.87 Score=27.49 Aligned_cols=36 Identities=14% Similarity=0.200 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHhhcCcchhhhhhccccchhhHHHHH
Q 036324 47 IEEQLCMFLHILAHHVKSRTIHSRFLRSRETISRYF 82 (91)
Q Consensus 47 veE~vamFL~i~~~~~~~r~i~~~F~~S~eTisr~f 82 (91)
+..++.|+=.-+....+||.|+...|.|..||+|.=
T Consensus 44 la~R~~ia~~L~~G~~s~reI~~~~gvs~aTItR~s 79 (101)
T d1jhga_ 44 LGTRVRIIEELLRGEMSQRELKNELGAGIATITRGS 79 (101)
T ss_dssp HHHHHHHHHHHHHCCSCHHHHHHHHCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCcCHHHHHHHhCCChHHHHHHH
Confidence 334444443333444799999999999999999863
No 39
>d1jhfa1 a.4.5.2 (A:2-72) LexA repressor, N-terminal DNA-binding domain {Escherichia coli [TaxId: 562]}
Probab=81.23 E-value=0.58 Score=26.01 Aligned_cols=27 Identities=11% Similarity=0.025 Sum_probs=22.7
Q ss_pred hcCcchhhhhhcccc-chhhHHHHHHHH
Q 036324 59 AHHVKSRTIHSRFLR-SRETISRYFNLV 85 (91)
Q Consensus 59 ~~~~~~r~i~~~F~~-S~eTisr~f~~V 85 (91)
|..-++|.|+..||- |.+||++++...
T Consensus 22 G~~Ps~rei~~~~g~~S~stv~~~l~~L 49 (71)
T d1jhfa1 22 GMPPTRAEIAQRLGFRSPNAAEEHLKAL 49 (71)
T ss_dssp SSCCCHHHHHHHTTCSSHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHcCCCCHHHHHHHHHHH
Confidence 455889999999996 999999997654
No 40
>d1ixca1 a.4.5.37 (A:1-89) LysR-type regulatory protein CbnR {Ralstonia eutropha [TaxId: 106590]}
Probab=81.20 E-value=0.93 Score=25.90 Aligned_cols=38 Identities=18% Similarity=0.222 Sum_probs=31.0
Q ss_pred HHHHHHHHHhhcCcchhhhhhccccchhhHHHHHHHHHH
Q 036324 49 EQLCMFLHILAHHVKSRTIHSRFLRSRETISRYFNLVLN 87 (91)
Q Consensus 49 E~vamFL~i~~~~~~~r~i~~~F~~S~eTisr~f~~Vl~ 87 (91)
+++-+|+-++-++ +...++...+.|++|||+.++..=+
T Consensus 4 ~~L~~f~~v~e~g-s~~~AA~~L~isq~avs~~i~~LE~ 41 (89)
T d1ixca1 4 RQLKYFIAVAEAG-NMAAAAKRLHVSQPPITRQMQALEA 41 (89)
T ss_dssp HHHHHHHHHHHHS-SHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC-CHHHHHHHhCCChHHHHHHHHHHHh
Confidence 5777888666555 8999999999999999999987643
No 41
>d1r71a_ a.4.14.1 (A:) Transcriptional repressor protein KorB DNA-binding domain {Escherichia coli [TaxId: 562]}
Probab=81.20 E-value=1.1 Score=26.48 Aligned_cols=38 Identities=18% Similarity=0.027 Sum_probs=30.4
Q ss_pred ccHHHHHHHHHHHhhcCcchhhhhhccccchhhHHHHHH
Q 036324 45 VSIEEQLCMFLHILAHHVKSRTIHSRFLRSRETISRYFN 83 (91)
Q Consensus 45 v~veE~vamFL~i~~~~~~~r~i~~~F~~S~eTisr~f~ 83 (91)
-++|+..|+= -.+..+.+...|+.++|+|..+|+++..
T Consensus 15 ~p~e~A~a~~-~l~~~g~s~~eiA~~~G~s~~~V~~~l~ 52 (114)
T d1r71a_ 15 TPREIADFIG-RELAKGKKKGDIAKEIGKSPAFITQHVT 52 (114)
T ss_dssp CHHHHHHHHH-HHHHTTCCHHHHHHHHTCCHHHHHHHHG
T ss_pred CHHHHHHHHH-HHHHhCCCHHHHHHHHCCcHHHHHHHHH
Confidence 4566666654 4457788999999999999999999874
No 42
>d1xsva_ a.4.13.3 (A:) Hypothetical protein SAV1236 {Staphylococcus aureus, strain Mu50 / ATCC 700699 [TaxId: 1280]}
Probab=81.12 E-value=1.5 Score=26.21 Aligned_cols=42 Identities=12% Similarity=0.067 Sum_probs=33.7
Q ss_pred HHHHHHHHHHhhcCcchhhhhhccccchhhHHHHHHHHHHHH
Q 036324 48 EEQLCMFLHILAHHVKSRTIHSRFLRSRETISRYFNLVLNAI 89 (91)
Q Consensus 48 eE~vamFL~i~~~~~~~r~i~~~F~~S~eTisr~f~~Vl~ai 89 (91)
+.|=.+|....-.+.|+..|+...|.|.+||+...+.-...+
T Consensus 21 e~QR~vl~L~~~e~ls~~EIA~~lgiS~~aV~~~l~Ra~~~L 62 (106)
T d1xsva_ 21 NKQRNYLELFYLEDYSLSEIADTFNVSRQAVYDNIRRTGDLV 62 (106)
T ss_dssp HHHHHHHHHHHTSCCCHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCcHHHHHHHHCcCHHHHHHHHHHHHHHH
Confidence 444455555566799999999999999999999998877654
No 43
>d1ub9a_ a.4.5.28 (A:) Hypothetical protein PH1061 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=79.23 E-value=0.97 Score=25.80 Aligned_cols=27 Identities=4% Similarity=0.000 Sum_probs=24.0
Q ss_pred CcchhhhhhccccchhhHHHHHHHHHH
Q 036324 61 HVKSRTIHSRFLRSRETISRYFNLVLN 87 (91)
Q Consensus 61 ~~~~r~i~~~F~~S~eTisr~f~~Vl~ 87 (91)
+.+..++++.++.|..|||+++...-+
T Consensus 30 ~~~~~eLa~~l~is~~~vs~~l~~L~~ 56 (100)
T d1ub9a_ 30 KAPFSQIQKVLDLTPGNLDSHIRVLER 56 (100)
T ss_dssp EEEHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred CeeHHHHHHHHhhccccccHHHHHHhh
Confidence 589999999999999999999887543
No 44
>d2g7sa1 a.4.1.9 (A:3-76) Putative transcriptional regulator Atu0279 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=79.21 E-value=0.73 Score=25.12 Aligned_cols=34 Identities=9% Similarity=-0.026 Sum_probs=26.8
Q ss_pred HHHHHHHHhhcCcchhhhhhccccchhhHHHHHH
Q 036324 50 QLCMFLHILAHHVKSRTIHSRFLRSRETISRYFN 83 (91)
Q Consensus 50 ~vamFL~i~~~~~~~r~i~~~F~~S~eTisr~f~ 83 (91)
.+.+|.-.=-.+.+.++|+..=|.|+.|+++||.
T Consensus 13 a~~l~~~~G~~~~s~~~Ia~~agvs~~~iY~~F~ 46 (74)
T d2g7sa1 13 ARTLIIRGGYNSFSYADISQVVGIRNASIHHHFP 46 (74)
T ss_dssp HHHHHHHHCGGGCCHHHHHHHHCCCHHHHHHHCS
T ss_pred HHHHHHHhCccccCHHHHHHHHCcCcchHHHHCc
Confidence 3444544444678999999999999999999984
No 45
>d2i10a1 a.4.1.9 (A:10-78) Putative transcriptional regulator RHA1_ro09068 {Rhodococcus sp. [TaxId: 1831]}
Probab=78.53 E-value=1.4 Score=23.65 Aligned_cols=36 Identities=6% Similarity=0.032 Sum_probs=29.1
Q ss_pred HHHHHHHHHHhhcCcchhhhhhccccchhhHHHHHH
Q 036324 48 EEQLCMFLHILAHHVKSRTIHSRFLRSRETISRYFN 83 (91)
Q Consensus 48 eE~vamFL~i~~~~~~~r~i~~~F~~S~eTisr~f~ 83 (91)
+-.+-+|.-.=-++.+.++|...-+.|+.|+++||.
T Consensus 7 ~aA~~lf~~~G~~~~ti~~Ia~~agvs~~~~Y~~F~ 42 (69)
T d2i10a1 7 QTAMELFWRQGYEGTSITDLTKALGINPPSLYAAFG 42 (69)
T ss_dssp HHHHHHHHHHTTTTCCHHHHHHHHTCCHHHHHHHHC
T ss_pred HHHHHHHHHHCcccCCHHHHHHHhCCChhHHHHHCc
Confidence 444556665555789999999999999999999994
No 46
>d1u2wa1 a.4.5.5 (A:12-119) Cadmium efflux system accessory protein CadC {Staphylococcus aureus [TaxId: 1280]}
Probab=78.12 E-value=1.3 Score=26.31 Aligned_cols=41 Identities=7% Similarity=-0.003 Sum_probs=31.2
Q ss_pred HHHHHHHHHHhh-cCcchhhhhhccccchhhHHHHHHHHHHH
Q 036324 48 EEQLCMFLHILA-HHVKSRTIHSRFLRSRETISRYFNLVLNA 88 (91)
Q Consensus 48 eE~vamFL~i~~-~~~~~r~i~~~F~~S~eTisr~f~~Vl~a 88 (91)
.-++.|+-+.+. ...+...++..++-|.+|||.|+...-+|
T Consensus 31 p~Rl~Il~~L~~~~~~~v~ela~~l~~s~s~vS~HL~~L~~a 72 (108)
T d1u2wa1 31 ENRAKITYALCQDEELCVCDIANILGVTIANASHHLRTLYKQ 72 (108)
T ss_dssp HHHHHHHHHHHHSSCEEHHHHHHHHTCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCCccHHHHHHHHccChhHHHHHHHHHHHC
Confidence 445677666554 44688999999999999999999765443
No 47
>d1ku3a_ a.4.13.2 (A:) Sigma70 (SigA, RpoD) {Thermus aquaticus [TaxId: 271]}
Probab=78.02 E-value=3.2 Score=22.26 Aligned_cols=45 Identities=18% Similarity=0.169 Sum_probs=36.1
Q ss_pred ccHHHHHHHHHHHh---hcCcchhhhhhccccchhhHHHHHHHHHHHH
Q 036324 45 VSIEEQLCMFLHIL---AHHVKSRTIHSRFLRSRETISRYFNLVLNAI 89 (91)
Q Consensus 45 v~veE~vamFL~i~---~~~~~~r~i~~~F~~S~eTisr~f~~Vl~ai 89 (91)
.+-.|+-.+-++.- +.+.+...|+..++.|.+.|++.-+..+..+
T Consensus 9 L~~rer~Ii~~ryGl~~~~~~tl~eIa~~lgiS~erVrqi~~~al~kL 56 (61)
T d1ku3a_ 9 LSEREAMVLKMRKGLIDGREHTLEEVGAYFGVTRERIRQIENKALRKL 56 (61)
T ss_dssp SCHHHHHHHHHHHTTTTSSCCCHHHHHHHHTCCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 55666666666652 5678899999999999999999998888754
No 48
>d1or7a1 a.4.13.2 (A:120-187) SigmaE factor (RpoE) {Escherichia coli [TaxId: 562]}
Probab=77.82 E-value=3.1 Score=22.01 Aligned_cols=44 Identities=14% Similarity=0.070 Sum_probs=34.2
Q ss_pred ccHHHHHHHHHHHhhcCcchhhhhhccccchhhHHHHHHHHHHHH
Q 036324 45 VSIEEQLCMFLHILAHHVKSRTIHSRFLRSRETISRYFNLVLNAI 89 (91)
Q Consensus 45 v~veE~vamFL~i~~~~~~~r~i~~~F~~S~eTisr~f~~Vl~ai 89 (91)
.+..++-++.|+.. .+.++..|+..+|.|..||....+.-...+
T Consensus 19 Lp~~~r~v~~l~~~-~~~s~~eIA~~lgis~~tv~~~l~ra~~~L 62 (68)
T d1or7a1 19 LPEDLRMAITLREL-DGLSYEEIAAIMDCPVGTVRSRIFRAREAI 62 (68)
T ss_dssp SCHHHHHHHHHHHT-TCCCHHHHHHHTTSCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH-hCCCHHHHHHHHCcCHHHHHHHHHHHHHHH
Confidence 45566666656554 578999999999999999999988766554
No 49
>d2frha1 a.4.5.28 (A:102-216) Pleiotropic regulator of virulence genes, SarA {Staphylococcus aureus [TaxId: 1280]}
Probab=77.79 E-value=2.8 Score=24.55 Aligned_cols=66 Identities=14% Similarity=0.206 Sum_probs=43.5
Q ss_pred HHHHHhCCCHHHHHHHHHHHHhCCCCCCCCCccHHHHHHH-HHHHhhc-CcchhhhhhccccchhhHHHHHHHHH
Q 036324 14 ECVNQLRMDKRTFELLCGLLRINGGLKADGTVSIEEQLCM-FLHILAH-HVKSRTIHSRFLRSRETISRYFNLVL 86 (91)
Q Consensus 14 ~c~~~fRM~~~~F~~L~~~L~~~~~l~~s~~v~veE~vam-FL~i~~~-~~~~r~i~~~F~~S~eTisr~f~~Vl 86 (91)
+|.+.++|.+. +.++.+.+...++ ++..|-..+ +|+.... +.+..+++...+.|++|||+.+...-
T Consensus 7 ~~~~l~~~~~~-~~~~~~~~~~~~~------Ls~~q~~vL~~l~~~~~~~~t~~~la~~l~~~~~tvs~~i~~Le 74 (115)
T d2frha1 7 DCFELLSMVTY-ADKLKSLIKKEFS------ISFEEFAVLTYISENKEKEYYLKDIINHLNYKQPQVVKAVKILS 74 (115)
T ss_dssp SHHHHHHHHHH-HHHHHHHHHHTTC------CCHHHHHHHHHHHHTCCSEEEHHHHHHHSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHcC------CCHHHHHHHHHHHcCCCCCCCHHHHHHHHCCCHhHHHHHHHHHH
Confidence 46666655543 3467777777664 555554443 3333322 35888999999999999999987653
No 50
>d1lnwa_ a.4.5.28 (A:) MexR repressor {Pseudomonas aeruginosa [TaxId: 287]}
Probab=76.92 E-value=4.6 Score=24.01 Aligned_cols=70 Identities=7% Similarity=-0.041 Sum_probs=41.8
Q ss_pred hhHHHHHhCCCHHHHHHHHHHHHhCCCCCCCCCccHHHHHHHHHHHhhcCcchhhhhhccccchhhHHHHHHHHH
Q 036324 12 DIECVNQLRMDKRTFELLCGLLRINGGLKADGTVSIEEQLCMFLHILAHHVKSRTIHSRFLRSRETISRYFNLVL 86 (91)
Q Consensus 12 ~~~c~~~fRM~~~~F~~L~~~L~~~~~l~~s~~v~veE~vamFL~i~~~~~~~r~i~~~F~~S~eTisr~f~~Vl 86 (91)
|+-.......-.+.-..+-..+..+ ..+++..|--.++.-.-..+.+..+++...+.|++||||.++..-
T Consensus 6 ~dl~~~l~~~~~~~~~~~~~~~~~~-----~~~lt~~q~~vL~~l~~~~~~t~~~la~~l~~~~~~vsr~l~~L~ 75 (141)
T d1lnwa_ 6 PDLMPALMAVFQHVRTRIQSELDCQ-----RLDLTPPDVHVLKLIDEQRGLNLQDLGRQMCRDKALITRKIRELE 75 (141)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHT-----TCCCCHHHHHHHHHHHSSTTCBHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhh-----cCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCccHhHHHHHHHHHH
Confidence 3344444444344444444444321 124666655444333334457999999999999999999987653
No 51
>d2esna1 a.4.5.37 (A:3-91) Probable LysR-type transcriptional regulator PA0477 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=76.32 E-value=1.4 Score=25.07 Aligned_cols=39 Identities=18% Similarity=0.152 Sum_probs=30.5
Q ss_pred HHHHHHHHHhhcCcchhhhhhccccchhhHHHHHHHHHHH
Q 036324 49 EQLCMFLHILAHHVKSRTIHSRFLRSRETISRYFNLVLNA 88 (91)
Q Consensus 49 E~vamFL~i~~~~~~~r~i~~~F~~S~eTisr~f~~Vl~a 88 (91)
.++-.|.-++-+ .++..++...+.|.+|||+.+++.=+.
T Consensus 9 ~~L~~f~~v~~~-gs~t~AA~~l~isq~avs~~l~~lE~~ 47 (89)
T d2esna1 9 NLLLVFDALYRH-RNVGTAASELAISASAFSHALGRLRQG 47 (89)
T ss_dssp THHHHHHHHHHH-SSHHHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-CCHHHHHHHHCCCCcHhhHHHHHHHhc
Confidence 345566655555 599999999999999999999876444
No 52
>d1bl0a1 a.4.1.8 (A:9-62) MarA {Escherichia coli [TaxId: 562]}
Probab=75.81 E-value=1.2 Score=22.78 Aligned_cols=25 Identities=16% Similarity=0.127 Sum_probs=20.1
Q ss_pred cchhhhhhccccchhhHHHHHHHHH
Q 036324 62 VKSRTIHSRFLRSRETISRYFNLVL 86 (91)
Q Consensus 62 ~~~r~i~~~F~~S~eTisr~f~~Vl 86 (91)
.+-.+++..++.|..+++|.|++.+
T Consensus 20 ~tl~~lA~~~~~s~~~l~r~Fk~~~ 44 (54)
T d1bl0a1 20 LSLEKVSERSGYSKWHLQRMFKKET 44 (54)
T ss_dssp CCCHHHHHHSSSCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHCcCHHHHHHHHHHHH
Confidence 3445677889999999999999865
No 53
>d2gena1 a.4.1.9 (A:6-75) Probable transcriptional regulator PA1836 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=75.65 E-value=1.3 Score=23.61 Aligned_cols=34 Identities=18% Similarity=0.091 Sum_probs=26.9
Q ss_pred HHHHHHHHhhcCcchhhhhhccccchhhHHHHHH
Q 036324 50 QLCMFLHILAHHVKSRTIHSRFLRSRETISRYFN 83 (91)
Q Consensus 50 ~vamFL~i~~~~~~~r~i~~~F~~S~eTisr~f~ 83 (91)
.+.+|.-.-=++.+.+.|...-|.|+.|+++||.
T Consensus 9 a~~l~~~~G~~~~si~~Ia~~agvs~~t~Y~~F~ 42 (70)
T d2gena1 9 ALACFSEHGVDATTIEMIRDRSGASIGSLYHHFG 42 (70)
T ss_dssp HHHHHHHHCTTTCCHHHHHHHHCCCHHHHHHHTC
T ss_pred HHHHHHHhCcccCCHHHHHHHHCcCHHHHHHHCC
Confidence 3444544444678999999999999999999994
No 54
>d2fx0a1 a.4.1.9 (A:4-76) Hemolysin II regulatory protein, HlyIIR {Bacillus cereus [TaxId: 1396]}
Probab=75.48 E-value=1.7 Score=23.66 Aligned_cols=33 Identities=18% Similarity=0.004 Sum_probs=26.0
Q ss_pred HHHHHHHhhcCcchhhhhhccccchhhHHHHHH
Q 036324 51 LCMFLHILAHHVKSRTIHSRFLRSRETISRYFN 83 (91)
Q Consensus 51 vamFL~i~~~~~~~r~i~~~F~~S~eTisr~f~ 83 (91)
+.+|.-.--.+.+.+.|+.+=|.|..|+++||.
T Consensus 14 ~~l~~~~G~~~~si~~Ia~~agvs~~~~Y~~F~ 46 (73)
T d2fx0a1 14 KKKFGERGYEGTSIQEIAKEAKVNVAMASYYFN 46 (73)
T ss_dssp HHHHHHHCTTTCCHHHHHHHHTSCHHHHHHHHT
T ss_pred HHHHHHhCcccCcHHHHHHHHCcChhHHHHHCc
Confidence 344444444568999999999999999999995
No 55
>d2hr3a1 a.4.5.28 (A:2-146) Probable transcriptional regulator PA3067 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=75.39 E-value=2 Score=25.78 Aligned_cols=58 Identities=10% Similarity=0.067 Sum_probs=38.4
Q ss_pred HHHHHHHHHhCCCCCCCCCccHHHHHH-HHHHHhhcCcchhhhhhccccchhhHHHHHHHHH
Q 036324 26 FELLCGLLRINGGLKADGTVSIEEQLC-MFLHILAHHVKSRTIHSRFLRSRETISRYFNLVL 86 (91)
Q Consensus 26 F~~L~~~L~~~~~l~~s~~v~veE~va-mFL~i~~~~~~~r~i~~~F~~S~eTisr~f~~Vl 86 (91)
...+...++.... ..+++..+-.+ .+|+.-+.+.+...++.+++.|++||++.+...-
T Consensus 16 ~~~i~~~~~~~~~---~~glt~~q~~vL~~L~~~~g~~t~~~La~~~~~~~~~vs~~i~~L~ 74 (145)
T d2hr3a1 16 VTTLTRRLRREAQ---ADPVQFSQLVVLGAIDRLGGDVTPSELAAAERMRSSNLAALLRELE 74 (145)
T ss_dssp HHHHHHHHHHTTC---CCHHHHHHHHHHHHHHHTTSCBCHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh---hcCCCHHHHHHHHHHHHcCCCCCHHHHHHHHCCCHHHHHHHHHHHH
Confidence 3444455555432 23566555443 3455444457999999999999999999988654
No 56
>d2id3a1 a.4.1.9 (A:13-80) Putative transcriptional regulator SCO5951 {Streptomyces coelicolor [TaxId: 1902]}
Probab=74.73 E-value=1.7 Score=23.14 Aligned_cols=35 Identities=11% Similarity=-0.071 Sum_probs=26.8
Q ss_pred HHHHHHHHHhhcCcchhhhhhccccchhhHHHHHH
Q 036324 49 EQLCMFLHILAHHVKSRTIHSRFLRSRETISRYFN 83 (91)
Q Consensus 49 E~vamFL~i~~~~~~~r~i~~~F~~S~eTisr~f~ 83 (91)
..+.+|.-.=-.+.+.++|+..-+.|..|+++||.
T Consensus 14 aa~~l~~~~G~~~~t~~~Ia~~agvs~~~iY~~F~ 48 (68)
T d2id3a1 14 AAGDALAADGFDALDLGEIARRAGVGKTTVYRRWG 48 (68)
T ss_dssp HHHHHHHHHCGGGCCHHHHHHHHTCCHHHHHHHHC
T ss_pred HHHHHHHHhCcccCCHHHHHHHHCcCHHHHHHHCc
Confidence 33444444444567899999999999999999994
No 57
>d2ppxa1 a.35.1.3 (A:30-91) Uncharacterized protein Atu1735 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=74.71 E-value=0.76 Score=24.62 Aligned_cols=24 Identities=13% Similarity=0.210 Sum_probs=21.1
Q ss_pred hhcCcchhhhhhccccchhhHHHH
Q 036324 58 LAHHVKSRTIHSRFLRSRETISRY 81 (91)
Q Consensus 58 ~~~~~~~r~i~~~F~~S~eTisr~ 81 (91)
-..|.+...++...|.|..|||++
T Consensus 9 ~~~gltQ~elA~~lGvs~~tvs~~ 32 (62)
T d2ppxa1 9 RALKLTQEEFSARYHIPLGTLRDW 32 (62)
T ss_dssp HHTTCCHHHHHHHHTCCHHHHHHH
T ss_pred HHcCCCHHHHHHHhCCCHHHHHHH
Confidence 346789999999999999999986
No 58
>d2etha1 a.4.5.28 (A:1-140) Putative transcriptional regulator TM0816 {Thermotoga maritima [TaxId: 2336]}
Probab=73.83 E-value=6.4 Score=23.11 Aligned_cols=43 Identities=9% Similarity=0.111 Sum_probs=30.4
Q ss_pred CccHHHHHHHHHHHhhcCcchhhhhhccccchhhHHHHHHHHH
Q 036324 44 TVSIEEQLCMFLHILAHHVKSRTIHSRFLRSRETISRYFNLVL 86 (91)
Q Consensus 44 ~v~veE~vamFL~i~~~~~~~r~i~~~F~~S~eTisr~f~~Vl 86 (91)
+++..|-..+..-.-..+.+...++..++.|++|||+..+...
T Consensus 29 ~lt~~q~~iL~~l~~~~~~t~~~La~~l~i~~~~vs~~v~~L~ 71 (140)
T d2etha1 29 DMKTTELYAFLYVALFGPKKMKEIAEFLSTTKSNVTNVVDSLE 71 (140)
T ss_dssp HSBHHHHHHHHHHHHHCCBCHHHHHHHTTSCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHcCCcCHHHHHHHHCcCHHHHHHHHHHHH
Confidence 5666554333222222357999999999999999999987654
No 59
>d1mkma1 a.4.5.33 (A:1-75) Transcriptional regulator IclR, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=73.20 E-value=4.1 Score=22.20 Aligned_cols=41 Identities=15% Similarity=0.245 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHh--hcCcchhhhhhccccchhhHHHHHHHHHH
Q 036324 47 IEEQLCMFLHIL--AHHVKSRTIHSRFLRSRETISRYFNLVLN 87 (91)
Q Consensus 47 veE~vamFL~i~--~~~~~~r~i~~~F~~S~eTisr~f~~Vl~ 87 (91)
++..+.|-=++. ..+.+..+|++.-+.+++|++|+.+...+
T Consensus 4 l~r~l~IL~~~a~~~~~~s~~eia~~~~~~~st~~rll~tL~~ 46 (75)
T d1mkma1 4 LKKAFEILDFIVKNPGDVSVSEIAEKFNMSVSNAYKYMVVLEE 46 (75)
T ss_dssp HHHHHHHHHHHHHCSSCBCHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCHHHHHHHHCcCHHHHHHHHHHHHH
Confidence 344444443333 34579999999999999999999887654
No 60
>d1sgma1 a.4.1.9 (A:5-77) Putative transcriptional regulator YxaF {Bacillus subtilis [TaxId: 1423]}
Probab=73.13 E-value=1.4 Score=23.81 Aligned_cols=36 Identities=8% Similarity=0.012 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHhhcCcchhhhhhccccchhhHHHHH
Q 036324 47 IEEQLCMFLHILAHHVKSRTIHSRFLRSRETISRYF 82 (91)
Q Consensus 47 veE~vamFL~i~~~~~~~r~i~~~F~~S~eTisr~f 82 (91)
++....+|.-.-=++.+.++|...=+.|..|+++||
T Consensus 8 l~aa~~l~~~~G~~~~si~~Ia~~agvs~~~iy~~F 43 (73)
T d1sgma1 8 LHTASRLSQLQGYHATGLNQIVKESGAPKGSLYHFF 43 (73)
T ss_dssp HHHHHHHHHHHCTTTCCHHHHHHHHCCCSCHHHHST
T ss_pred HHHHHHHHHHhCcccCCHHHHHHHhCCCHHHHHHHc
Confidence 445556666666678999999999999999999999
No 61
>d1z91a1 a.4.5.28 (A:8-144) Organic hydroperoxide resistance transcriptional regulator OhrR {Bacillus subtilis [TaxId: 1423]}
Probab=73.12 E-value=2.2 Score=25.41 Aligned_cols=64 Identities=8% Similarity=0.079 Sum_probs=39.5
Q ss_pred HHHHhCCCHHHHHHHHHHHHhCCCCCCCCCccHHHHHH-HHHHHhhcCcchhhhhhccccchhhHHHHHHHHH
Q 036324 15 CVNQLRMDKRTFELLCGLLRINGGLKADGTVSIEEQLC-MFLHILAHHVKSRTIHSRFLRSRETISRYFNLVL 86 (91)
Q Consensus 15 c~~~fRM~~~~F~~L~~~L~~~~~l~~s~~v~veE~va-mFL~i~~~~~~~r~i~~~F~~S~eTisr~f~~Vl 86 (91)
|+..++.++......-..+++ + +++..+-.. ++|+. ..+.+..+++...+.|+.||+|.++..-
T Consensus 8 ~~~l~~~~~~~~~~~~~~l~~-~------gLt~~q~~vL~~l~~-~~~~t~~~La~~~~i~~~~vsr~i~~L~ 72 (137)
T d1z91a1 8 SFLLYASSREMTKQYKPLLDK-L------NITYPQYLALLLLWE-HETLTVKKMGEQLYLDSGTLTPMLKRME 72 (137)
T ss_dssp HHHHHHHHHHHHTTSHHHHTT-T------CCCHHHHHHHHHHHH-HSEEEHHHHHHTTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH-c------CcCHHHHHHHHHHHc-CCCCCHHHHHHHHCcCHHHHHHHHHHHh
Confidence 444444444444444444432 3 344444332 33333 4579999999999999999999887653
No 62
>d2vkva1 a.4.1.9 (A:6-67) Tetracyclin repressor (Tet-repressor, TetR) {Escherichia coli [TaxId: 562]}
Probab=72.86 E-value=1.2 Score=23.59 Aligned_cols=33 Identities=9% Similarity=0.036 Sum_probs=26.4
Q ss_pred HHHHHHHhhcCcchhhhhhccccchhhHHHHHH
Q 036324 51 LCMFLHILAHHVKSRTIHSRFLRSRETISRYFN 83 (91)
Q Consensus 51 vamFL~i~~~~~~~r~i~~~F~~S~eTisr~f~ 83 (91)
..+|--.=-.+.+.++|+.+=|.|..||++||.
T Consensus 9 ~~l~~~~G~~~~s~~~Ia~~agvs~~tiy~~F~ 41 (62)
T d2vkva1 9 LELGNEVGIEGLTTRKLAQKLGVEQPTLYWHVK 41 (62)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHTSCHHHHHHHSC
T ss_pred HHHHHHhCcccCCHHHHHHHhCCCHHHHHHHCC
Confidence 344444445678999999999999999999994
No 63
>d1z05a1 a.4.5.63 (A:10-80) Transcriptional regulator VC2007 N-terminal domain {Vibrio cholerae [TaxId: 666]}
Probab=72.68 E-value=3.3 Score=22.22 Aligned_cols=30 Identities=7% Similarity=0.077 Sum_probs=25.9
Q ss_pred hcCcchhhhhhccccchhhHHHHHHHHHHH
Q 036324 59 AHHVKSRTIHSRFLRSRETISRYFNLVLNA 88 (91)
Q Consensus 59 ~~~~~~r~i~~~F~~S~eTisr~f~~Vl~a 88 (91)
....+-.+++...+-|..||+++..+..++
T Consensus 18 ~g~~sr~eLa~~~glS~~Tv~~~l~~L~~~ 47 (71)
T d1z05a1 18 KGPISRIDLSKESELAPASITKITRELIDA 47 (71)
T ss_dssp HCSBCHHHHHHHHTCCHHHHHHHHHHHHHT
T ss_pred cCCcCHHHHHHHHCCCHHHHHHHHHHHHHC
Confidence 346888999999999999999999987653
No 64
>d2o7ta1 a.4.1.9 (A:1-78) Transcriptional regulator Cgl1640/Cg1846 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=72.39 E-value=1.1 Score=24.68 Aligned_cols=32 Identities=13% Similarity=0.082 Sum_probs=24.9
Q ss_pred HHHHHHhhcCcchhhhhhccccchhhHHHHHH
Q 036324 52 CMFLHILAHHVKSRTIHSRFLRSRETISRYFN 83 (91)
Q Consensus 52 amFL~i~~~~~~~r~i~~~F~~S~eTisr~f~ 83 (91)
.+|.-.--++.+.++|..+=|.|..|+++||.
T Consensus 18 ~l~~~~G~~~~t~~~Ia~~agvs~~t~y~~F~ 49 (78)
T d2o7ta1 18 NLYRTHHHDSLTMENIAEQAGVGVATLYRNFP 49 (78)
T ss_dssp HHHHHSCGGGCCHHHHHHHHTCCHHHHHHHCS
T ss_pred HHHHHhCccccCHHHHHHHhCCCHHHHHHHCc
Confidence 33333333668899999999999999999984
No 65
>d2auwa1 a.35.1.10 (A:88-154) Hypothetical protein NE0471 C-terminal domain {Nitrosomonas europaea [TaxId: 915]}
Probab=72.36 E-value=1.2 Score=24.74 Aligned_cols=26 Identities=19% Similarity=0.193 Sum_probs=23.4
Q ss_pred HHhhcCcchhhhhhccccchhhHHHH
Q 036324 56 HILAHHVKSRTIHSRFLRSRETISRY 81 (91)
Q Consensus 56 ~i~~~~~~~r~i~~~F~~S~eTisr~ 81 (91)
|.-..|.+...+++..|.|..||++|
T Consensus 9 ~R~~~gltQ~elA~~LGvs~~ti~~y 34 (67)
T d2auwa1 9 WMHRNNLSLTTAAEALGISRRMVSYY 34 (67)
T ss_dssp HHHHTTCCHHHHHHHHTSCHHHHHHH
T ss_pred HHHHcCCCHHHHHHHhCCCHHHHHHH
Confidence 56678899999999999999999987
No 66
>d1aisb2 a.74.1.2 (B:1206-1300) Transcription factor IIB (TFIIB), core domain {Archaeon Pyrococcus woesei [TaxId: 2262]}
Probab=71.84 E-value=6.2 Score=22.11 Aligned_cols=73 Identities=7% Similarity=0.121 Sum_probs=44.9
Q ss_pred HHHhCCCHHHHH---HHHHHHHhCCCCCCCCCccHHHHHHHHHH--HhhcCcchhhhhhccccchhhHHHHHHHHHHHH
Q 036324 16 VNQLRMDKRTFE---LLCGLLRINGGLKADGTVSIEEQLCMFLH--ILAHHVKSRTIHSRFLRSRETISRYFNLVLNAI 89 (91)
Q Consensus 16 ~~~fRM~~~~F~---~L~~~L~~~~~l~~s~~v~veE~vamFL~--i~~~~~~~r~i~~~F~~S~eTisr~f~~Vl~ai 89 (91)
-+.++++.++-. .+++...+.. +..++....-=.-++|+- ..+.+-+.++|++-++.|.-||.+.+++..+.+
T Consensus 11 ~~~L~L~~~i~~~A~~i~~~~~~~~-~~~Gr~p~~vaAA~iY~a~r~~~~~~t~~eIa~~~~vs~~tI~~~yk~l~~~l 88 (95)
T d1aisb2 11 ADELGLSEKVRRRAIEILDEAYKRG-LTSGKSPAGLVAAALYIASLLEGEKRTQREVAEVARVTEVTVRNRYKELVEKL 88 (95)
T ss_dssp HHHHTCCHHHHHHHHHHHHHHHHTT-CCTTSCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTCCHHHHHHHHHHHHHHH
T ss_pred HHHcCcCHHHHHHHHHHHHHHHHcC-CcCCCcHHhHHHHHHHHHHHHcCCCcCHHHHHHHHCCCHHHHHHHHHHHHHHh
Confidence 445666654433 3334444433 333343333333344442 345567889999999999999999999887754
No 67
>d3bwga1 a.4.5.6 (A:5-82) Transcriptional regulator YydK {Bacillus subtilis [TaxId: 1423]}
Probab=71.75 E-value=4.8 Score=21.97 Aligned_cols=43 Identities=16% Similarity=0.246 Sum_probs=28.7
Q ss_pred HHHHHHHHHhCCCCCCCCCccHHHHHHHHHHHhhcCcchhhhhhccccchhhHHHHHHHH
Q 036324 26 FELLCGLLRINGGLKADGTVSIEEQLCMFLHILAHHVKSRTIHSRFLRSRETISRYFNLV 85 (91)
Q Consensus 26 F~~L~~~L~~~~~l~~s~~v~veE~vamFL~i~~~~~~~r~i~~~F~~S~eTisr~f~~V 85 (91)
...|.+.+.. +.+++...++.| +.++..|+.|+.||.+.+...
T Consensus 4 ~~~i~~~I~~-g~l~~G~~LPse----------------~~La~~~~vSr~tvr~Al~~L 46 (78)
T d3bwga1 4 ATEIETYIEE-HQLQQGDKLPVL----------------ETLMAQFEVSKSTITKSLELL 46 (78)
T ss_dssp HHHHHHHHHH-TTCCTTCBCCCH----------------HHHHHHTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHc-CCCCCcCCCcCH----------------HHHHHHHCCCHHHHHHHHHHH
Confidence 3445555554 445665556555 455789999999998877654
No 68
>d3deua1 a.4.5.28 (A:2-141) Transcriptional regulator SlyA {Salmonella typhimurium [TaxId: 90371]}
Probab=71.71 E-value=3.6 Score=24.30 Aligned_cols=42 Identities=7% Similarity=0.038 Sum_probs=31.7
Q ss_pred ccHHH-HHHHHHHHhhcCcchhhhhhccccchhhHHHHHHHHH
Q 036324 45 VSIEE-QLCMFLHILAHHVKSRTIHSRFLRSRETISRYFNLVL 86 (91)
Q Consensus 45 v~veE-~vamFL~i~~~~~~~r~i~~~F~~S~eTisr~f~~Vl 86 (91)
++..+ .+-.+|+..+.+.+..+++..++.+++||++..+...
T Consensus 29 lt~~~~~~L~~l~~~~~~~t~~~la~~l~i~~~~vs~~l~~L~ 71 (140)
T d3deua1 29 LTQTHWVTLHNIHQLPPDQSQIQLAKAIGIEQPSLVRTLDQLE 71 (140)
T ss_dssp CCHHHHHHHHHHHHSCSSEEHHHHHHHHTSCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcCCCccHHHHHHHHCCCHhHHHHHHHHHH
Confidence 44444 4555566555668999999999999999999887654
No 69
>d2isya1 a.4.5.24 (A:2-64) Iron-dependent regulator IdeR {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=71.67 E-value=2 Score=23.30 Aligned_cols=28 Identities=18% Similarity=0.081 Sum_probs=24.1
Q ss_pred hcCcchhhhhhccccchhhHHHHHHHHH
Q 036324 59 AHHVKSRTIHSRFLRSRETISRYFNLVL 86 (91)
Q Consensus 59 ~~~~~~r~i~~~F~~S~eTisr~f~~Vl 86 (91)
+...+..+|++.++.|++||++.++..-
T Consensus 21 ~~~v~~~~iA~~L~vs~~SVt~mvkrL~ 48 (63)
T d2isya1 21 GVTPLRARIAERLDQSGPTVSQTVSRME 48 (63)
T ss_dssp TCCCCHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred CCCCcHHHHHHHhCCCchhHHHHHHHHH
Confidence 4558889999999999999999988754
No 70
>d1ttya_ a.4.13.2 (A:) Sigma70 (SigA, RpoD) {Thermotoga maritima [TaxId: 2336]}
Probab=70.82 E-value=5.4 Score=22.85 Aligned_cols=46 Identities=17% Similarity=0.149 Sum_probs=36.2
Q ss_pred CccHHHHHHHHHHH---hhcCcchhhhhhccccchhhHHHHHHHHHHHH
Q 036324 44 TVSIEEQLCMFLHI---LAHHVKSRTIHSRFLRSRETISRYFNLVLNAI 89 (91)
Q Consensus 44 ~v~veE~vamFL~i---~~~~~~~r~i~~~F~~S~eTisr~f~~Vl~ai 89 (91)
..+..|+..+-++. -+...+...|+..|+.|+|.|..+-...+..+
T Consensus 18 ~L~~rE~~Ii~~rfGl~~~~~~tl~eI~~~lgiSrERVRQie~~al~kL 66 (87)
T d1ttya_ 18 TLSPREAMVLRMRYGLLDGKPKTLEEVGQYFNVTRERIRQIEVKALRKL 66 (87)
T ss_dssp TSCHHHHHHHHHHHTTTTSSCCCHHHHHHHHTCCHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHcCCCCCCcCCHHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 35667777777765 24668999999999999999998888877654
No 71
>d1v7ba1 a.4.1.9 (A:1-74) Transcriptional regulator Cgl2612 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=70.57 E-value=1.3 Score=23.88 Aligned_cols=36 Identities=6% Similarity=-0.056 Sum_probs=27.7
Q ss_pred HHHHHHHHHHhhcCcchhhhhhccccchhhHHHHHH
Q 036324 48 EEQLCMFLHILAHHVKSRTIHSRFLRSRETISRYFN 83 (91)
Q Consensus 48 eE~vamFL~i~~~~~~~r~i~~~F~~S~eTisr~f~ 83 (91)
+..+.+|.-.=-.+.+.+.|+..=|.|..|+++||.
T Consensus 11 ~aa~~l~~~~G~~~~s~~~Ia~~agvs~~t~Y~~F~ 46 (74)
T d1v7ba1 11 RTAIDYIGEYSLETLSYDSLAEATGLSKSGLIYHFP 46 (74)
T ss_dssp HHHHHHHHHSCSTTCCHHHHHHHHCSCHHHHHHHCS
T ss_pred HHHHHHHHHhCccccCHHHHHHHhCcCcchHhhhCC
Confidence 344445555555678999999999999999999984
No 72
>d2p7vb1 a.4.13.2 (B:546-613) Sigma70 (SigA, RpoD) {Escherichia coli [TaxId: 562]}
Probab=70.21 E-value=4.5 Score=22.17 Aligned_cols=44 Identities=14% Similarity=0.193 Sum_probs=30.9
Q ss_pred cHHHHHHHHHHH-h--hcCcchhhhhhccccchhhHHHHHHHHHHHH
Q 036324 46 SIEEQLCMFLHI-L--AHHVKSRTIHSRFLRSRETISRYFNLVLNAI 89 (91)
Q Consensus 46 ~veE~vamFL~i-~--~~~~~~r~i~~~F~~S~eTisr~f~~Vl~ai 89 (91)
+..|+--+-++. + +...+...|+..|+.|.|.|.++-...+..+
T Consensus 7 ~~rE~~Ii~~rfGl~~~~~~tl~eI~~~lgiSrerVrqie~~al~kL 53 (68)
T d2p7vb1 7 TAREAKVLRMRFGIDMNTDYTLEEVGKQFDVTRERIRQIEAKALRKL 53 (68)
T ss_dssp CHHHHHHHHHHTTTTSSSCCCHHHHHHHHTCCHHHHHHHHHHHHHGG
T ss_pred CHHHHHHHHHHcCCCCCCcCCHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 444444444443 1 2446788899999999999999888777654
No 73
>d2fbqa1 a.4.1.9 (A:2-80) Transcriptional regulator PsrA {Pseudomonas aeruginosa [TaxId: 287]}
Probab=70.14 E-value=2 Score=23.39 Aligned_cols=34 Identities=15% Similarity=0.026 Sum_probs=26.5
Q ss_pred HHHHHHHHhhcCcchhhhhhccccchhhHHHHHH
Q 036324 50 QLCMFLHILAHHVKSRTIHSRFLRSRETISRYFN 83 (91)
Q Consensus 50 ~vamFL~i~~~~~~~r~i~~~F~~S~eTisr~f~ 83 (91)
.+.+|.-.--.+.+.+.|...=|.|..|+++||.
T Consensus 13 a~~~~~~~G~~~~ti~~Ia~~agvs~~s~y~~F~ 46 (79)
T d2fbqa1 13 AEQLFAEKGFAETSLRLITSKAGVNLAAVNYHFG 46 (79)
T ss_dssp HHHHHHHHCSTTCCHHHHHHHHTSCHHHHHHHTC
T ss_pred HHHHHHHhCcccccHHHHHHHHCcChhHHHHHCc
Confidence 3444444444678999999999999999999994
No 74
>d2fbia1 a.4.5.28 (A:5-140) Probable transcriptional regulator PA4135 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=69.51 E-value=2.9 Score=24.68 Aligned_cols=42 Identities=5% Similarity=-0.002 Sum_probs=29.7
Q ss_pred ccHHHHHHHHHHHhhcCcchhhhhhccccchhhHHHHHHHHH
Q 036324 45 VSIEEQLCMFLHILAHHVKSRTIHSRFLRSRETISRYFNLVL 86 (91)
Q Consensus 45 v~veE~vamFL~i~~~~~~~r~i~~~F~~S~eTisr~f~~Vl 86 (91)
++..+-..+..-.-..+.+...++..++.+++|||+.+...-
T Consensus 28 lt~~q~~vL~~l~~~~~~t~~~la~~~~i~~~~vs~~i~~L~ 69 (136)
T d2fbia1 28 LTEQQWRVIRILRQQGEMESYQLANQACILRPSMTGVLARLE 69 (136)
T ss_dssp CCHHHHHHHHHHHHHCSEEHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcCCCCHHHHHHHHCCCHHHHHHHHHHHH
Confidence 444444433322234468889999999999999999988754
No 75
>d2hkua1 a.4.1.9 (A:18-87) Putative transcriptional regulator RHA1_ro03468 {Rhodococcus sp. RHA1 [TaxId: 101510]}
Probab=69.42 E-value=3.1 Score=22.34 Aligned_cols=34 Identities=15% Similarity=0.167 Sum_probs=27.5
Q ss_pred HHHHHHHHHhhcCcchhhhhhccccchhhHHHHHH
Q 036324 49 EQLCMFLHILAHHVKSRTIHSRFLRSRETISRYFN 83 (91)
Q Consensus 49 E~vamFL~i~~~~~~~r~i~~~F~~S~eTisr~f~ 83 (91)
-...+|. .-|.+.+.+.|...=|.|..|+++||.
T Consensus 9 aA~~l~~-~~G~~~t~~~Ia~~agvs~~~~Y~~F~ 42 (70)
T d2hkua1 9 AATELFL-EHGEGVPITQICAAAGAHPNQVTYYYG 42 (70)
T ss_dssp HHHHHHH-HHCTTSCHHHHHHHHTCCHHHHHHHHS
T ss_pred HHHHHHH-hcccCchHHHHHHHHCCChhhHHhcCC
Confidence 3445553 446789999999999999999999994
No 76
>d2fbka1 a.4.5.28 (A:8-179) Transcriptional regulator DR1159 {Deinococcus radiodurans [TaxId: 1299]}
Probab=69.19 E-value=6 Score=24.46 Aligned_cols=65 Identities=15% Similarity=0.020 Sum_probs=47.5
Q ss_pred HHHhCCCHHHHHHHHHHHHhCCCCCCCCCccHHHHHHHHHHHhhc--CcchhhhhhccccchhhHHHHHHHHH
Q 036324 16 VNQLRMDKRTFELLCGLLRINGGLKADGTVSIEEQLCMFLHILAH--HVKSRTIHSRFLRSRETISRYFNLVL 86 (91)
Q Consensus 16 ~~~fRM~~~~F~~L~~~L~~~~~l~~s~~v~veE~vamFL~i~~~--~~~~r~i~~~F~~S~eTisr~f~~Vl 86 (91)
.-+.|.....-..+-..|.+ ++|..+ +=.|-+.|+..|. +.+..+++...+.++.||++.++..-
T Consensus 38 ~ll~r~~~~l~~~~~~~l~~-~gLt~~-----q~~vL~~L~~~~~~~~lt~~eLa~~l~i~~~tvsr~l~~Le 104 (172)
T d2fbka1 38 LLLERLHAALGREIERTYAA-SGLNAA-----GWDLLLTLYRSAPPEGLRPTELSALAAISGPSTSNRIVRLL 104 (172)
T ss_dssp HHHHHHHHHHHHHHHHHHHT-TTCCHH-----HHHHHHHHHHHCCSSCBCHHHHHHHCSCCSGGGSSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH-cCCCHH-----HHHHHHHHHhhCCCCCcCHHHHHHHHCcCHhHHHHHHHHHH
Confidence 33456666777777777765 444432 2367778887775 47999999999999999999988754
No 77
>d2bv6a1 a.4.5.28 (A:5-140) Transcriptional regulator MgrA {Staphylococcus aureus [TaxId: 1280]}
Probab=69.15 E-value=3.4 Score=24.44 Aligned_cols=68 Identities=7% Similarity=0.107 Sum_probs=42.7
Q ss_pred hhHHHHHhCCCHHHHHHHHHH-HHhCCCCCCCCCccHHHHHHHHHHHhhcCcchhhhhhccccchhhHHHHHHHHH
Q 036324 12 DIECVNQLRMDKRTFELLCGL-LRINGGLKADGTVSIEEQLCMFLHILAHHVKSRTIHSRFLRSRETISRYFNLVL 86 (91)
Q Consensus 12 ~~~c~~~fRM~~~~F~~L~~~-L~~~~~l~~s~~v~veE~vamFL~i~~~~~~~r~i~~~F~~S~eTisr~f~~Vl 86 (91)
+.-|+..+...+..-....+. +.+ + +++..+-..+..-....+.+..+++...+.+++|++|.++..-
T Consensus 5 ~~l~~~l~~~~~~i~~~~~~~~l~~-~------glt~~q~~vL~~i~~~~~~t~~~la~~l~~~~~~~s~~l~~L~ 73 (136)
T d2bv6a1 5 EQLCFSLYNAQRQVNRYYSNKVFKK-Y------NLTYPQFLVLTILWDESPVNVKKVVTELALDTGTVSPLLKRME 73 (136)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHTHHH-H------TCCHHHHHHHHHHHHSSEEEHHHHHHHTTCCTTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhH-c------CCCHHHHHHHHHHHcCCCCCHHHHHHHHCCCHhHHHHHHHHHH
Confidence 344555554444333333333 333 3 3566665554444445678999999999999999999987653
No 78
>d2id6a1 a.4.1.9 (A:1-75) Transcriptional regulator TM1030 {Thermotoga maritima [TaxId: 2336]}
Probab=68.52 E-value=2.3 Score=22.98 Aligned_cols=35 Identities=14% Similarity=0.131 Sum_probs=27.2
Q ss_pred HHHHHHHHHhhcCcchhhhhhccccchhhHHHHHH
Q 036324 49 EQLCMFLHILAHHVKSRTIHSRFLRSRETISRYFN 83 (91)
Q Consensus 49 E~vamFL~i~~~~~~~r~i~~~F~~S~eTisr~f~ 83 (91)
-...+|.-.=-.+.+.+.|+..=|.|+.||++||.
T Consensus 11 aa~~l~~~~G~~~~ti~~Ia~~agvs~~~iY~~F~ 45 (75)
T d2id6a1 11 AAVEVFGKKGYDRATTDEIAEKAGVAKGLIFHYFK 45 (75)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHTCCTHHHHHHHS
T ss_pred HHHHHHHHhCccccCHHHHHHHhCCCHHHHHHHCC
Confidence 33444444445578999999999999999999995
No 79
>d1pb6a1 a.4.1.9 (A:14-85) Hypothetical transcriptional regulator YcdC {Escherichia coli [TaxId: 562]}
Probab=68.48 E-value=2.4 Score=22.76 Aligned_cols=32 Identities=19% Similarity=0.135 Sum_probs=25.1
Q ss_pred HHHHHHhhcCcchhhhhhccccchhhHHHHHH
Q 036324 52 CMFLHILAHHVKSRTIHSRFLRSRETISRYFN 83 (91)
Q Consensus 52 amFL~i~~~~~~~r~i~~~F~~S~eTisr~f~ 83 (91)
-+|.-.--.+.+.+.|...=|.|..|+++||.
T Consensus 15 ~l~~~~G~~~~ti~~Ia~~agvs~~t~y~~F~ 46 (72)
T d1pb6a1 15 DTFSQFGFHGTRLEQIAELAGVSKTNLLYYFP 46 (72)
T ss_dssp HHHHHHCTTTCCHHHHHHHTTSCHHHHHHHSS
T ss_pred HHHHHhCccccCHHHHHHHhCCChHHHHHHCc
Confidence 33443344568999999999999999999993
No 80
>d1p4xa2 a.4.5.28 (A:126-250) Staphylococcal accessory regulator A homolog, SarS {Staphylococcus aureus [TaxId: 1280]}
Probab=68.10 E-value=4 Score=24.32 Aligned_cols=56 Identities=9% Similarity=0.011 Sum_probs=37.1
Q ss_pred HHHHHHHHHHhCCCCCCCCCccHHHHHHH-HHHHhhc-CcchhhhhhccccchhhHHHHHHHHH
Q 036324 25 TFELLCGLLRINGGLKADGTVSIEEQLCM-FLHILAH-HVKSRTIHSRFLRSRETISRYFNLVL 86 (91)
Q Consensus 25 ~F~~L~~~L~~~~~l~~s~~v~veE~vam-FL~i~~~-~~~~r~i~~~F~~S~eTisr~f~~Vl 86 (91)
...++.+.+...++ +|..|-..+ +|+.... +.+..+|++..+.|.+|+|+.+...-
T Consensus 17 ~~~~~~~~~~k~~~------Ls~~q~~vL~~l~~~~~~~~~~~~ia~~l~~~~~~vs~~v~~L~ 74 (125)
T d1p4xa2 17 YTMYFKNIIKKHLT------LSFVEFTILAIITSQNKNIVLLKDLIETIHHKYPQTVRALNNLK 74 (125)
T ss_dssp HHHHHHHHHHHHCS------SCHHHHHHHHHHHTTTTCCEEHHHHHHHSSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcC------CCHHHHHHHHHHHHccCCCccHHHHHHHHCCCcchHHHHHHHHH
Confidence 44456667766664 455554332 3333222 35889999999999999999987654
No 81
>d2gfna1 a.4.1.9 (A:4-80) Probable transcriptional regulator RHA1_ro04631 {Rhodococcus sp. rha1 [TaxId: 101510]}
Probab=67.63 E-value=2.4 Score=22.98 Aligned_cols=34 Identities=18% Similarity=0.221 Sum_probs=26.1
Q ss_pred HHHHHHHHhhcCcchhhhhhccccchhhHHHHHH
Q 036324 50 QLCMFLHILAHHVKSRTIHSRFLRSRETISRYFN 83 (91)
Q Consensus 50 ~vamFL~i~~~~~~~r~i~~~F~~S~eTisr~f~ 83 (91)
.+.+|.--=-.+.+.+.|...=+.|+.|+++||.
T Consensus 15 a~~l~~~~G~~~~s~~~Ia~~agvs~~~lY~~F~ 48 (77)
T d2gfna1 15 VLALIAREGISAVTTRAVAEESGWSTGVLNHYFG 48 (77)
T ss_dssp HHHHHHHHCGGGCCHHHHHHHHSSCHHHHHHHTS
T ss_pred HHHHHHHhCccccCHHHHHHHHCCCHHHHHHHCc
Confidence 3444443333678999999999999999999994
No 82
>d1t56a1 a.4.1.9 (A:22-94) Ethr repressor {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=67.51 E-value=1.7 Score=23.31 Aligned_cols=32 Identities=16% Similarity=0.074 Sum_probs=24.8
Q ss_pred HHHHHHhhcCcchhhhhhccccchhhHHHHHH
Q 036324 52 CMFLHILAHHVKSRTIHSRFLRSRETISRYFN 83 (91)
Q Consensus 52 amFL~i~~~~~~~r~i~~~F~~S~eTisr~f~ 83 (91)
.+|.=.--.+.+.+.|...=|.|..|+++||.
T Consensus 14 ~l~~~~G~~~~t~~~Ia~~agvs~~t~Y~~F~ 45 (73)
T d1t56a1 14 NLLEDRPLADISVDDLAKGAGISRPTFYFYFP 45 (73)
T ss_dssp HHHHHSCGGGCCHHHHHHHHTCCHHHHHHHCS
T ss_pred HHHHHhCcccCCHHHHHHHhCCCHHHHHHHCc
Confidence 33333334568899999999999999999984
No 83
>d1qzpa_ a.14.1.1 (A:) Dematin {Human (Homo sapiens) [TaxId: 9606]}
Probab=67.21 E-value=1.5 Score=24.60 Aligned_cols=24 Identities=21% Similarity=0.153 Sum_probs=20.9
Q ss_pred ChhHHHHHhCCCHHHHHHHHHHHH
Q 036324 11 SDIECVNQLRMDKRTFELLCGLLR 34 (91)
Q Consensus 11 ~~~~c~~~fRM~~~~F~~L~~~L~ 34 (91)
++.++...|+|+++.|.+|-.+=+
T Consensus 35 sd~dF~~vFgms~~eF~~Lp~WKq 58 (68)
T d1qzpa_ 35 SAEDFSRVFAMSPEEFGKLALWKR 58 (68)
T ss_dssp CHHHHHHHSSSCHHHHHHSCHHHH
T ss_pred CHHHHHHHHCcCHHHHHHCcHHHH
Confidence 688999999999999999876643
No 84
>d2g7ga1 a.4.1.9 (A:9-73) Putative transcriptional regulator Rha04620 {Rhodococcus sp. rha1 [TaxId: 101510]}
Probab=67.18 E-value=1.8 Score=23.12 Aligned_cols=25 Identities=4% Similarity=-0.060 Sum_probs=22.6
Q ss_pred hcCcchhhhhhccccchhhHHHHHHH
Q 036324 59 AHHVKSRTIHSRFLRSRETISRYFNL 84 (91)
Q Consensus 59 ~~~~~~r~i~~~F~~S~eTisr~f~~ 84 (91)
| +.+.++|+..-+.|+.|+++||..
T Consensus 18 G-~~ti~~Ia~~agvs~~~iY~~F~~ 42 (65)
T d2g7ga1 18 G-DFRMPDLARHLNVQVSSIYHHAKG 42 (65)
T ss_dssp S-SCCHHHHHHHTTSCHHHHHTTSCH
T ss_pred C-CCCHHHHHHHhCccccchhhcCCC
Confidence 5 789999999999999999999853
No 85
>d1yu5x1 a.14.1.1 (X:10-76) Villin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=66.77 E-value=1.3 Score=24.90 Aligned_cols=23 Identities=22% Similarity=0.128 Sum_probs=20.2
Q ss_pred ChhHHHHHhCCCHHHHHHHHHHH
Q 036324 11 SDIECVNQLRMDKRTFELLCGLL 33 (91)
Q Consensus 11 ~~~~c~~~fRM~~~~F~~L~~~L 33 (91)
++.++...|+|+++.|.+|-.+=
T Consensus 34 sd~dF~~vFgms~~eF~~LP~WK 56 (67)
T d1yu5x1 34 SDEDFKAVFGMTRSAFANLPLWK 56 (67)
T ss_dssp CHHHHHHHHSSCHHHHHTSCHHH
T ss_pred CHHHHHHHHCcCHHHHHHCcHHH
Confidence 68899999999999999987663
No 86
>d1z6ra1 a.4.5.63 (A:12-81) Mlc protein N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=66.60 E-value=5.3 Score=21.46 Aligned_cols=27 Identities=15% Similarity=0.145 Sum_probs=23.9
Q ss_pred cchhhhhhccccchhhHHHHHHHHHHH
Q 036324 62 VKSRTIHSRFLRSRETISRYFNLVLNA 88 (91)
Q Consensus 62 ~~~r~i~~~F~~S~eTisr~f~~Vl~a 88 (91)
.+-.+++...+-|..||+++..+.+++
T Consensus 20 ~sr~eLa~~~gLS~~Tvs~iv~~L~~~ 46 (70)
T d1z6ra1 20 VSRIDLSRLAQLAPASITKIVHEMLEA 46 (70)
T ss_dssp CCHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHCcCHHHHHHHHHHHHHC
Confidence 677789999999999999999988764
No 87
>d2g3ba1 a.4.1.9 (A:2-73) Putative transcriptional regulator {Rhodococcus sp. rha1 [TaxId: 101510]}
Probab=66.57 E-value=2.7 Score=22.54 Aligned_cols=32 Identities=6% Similarity=-0.092 Sum_probs=24.9
Q ss_pred HHHHHHhhcCcchhhhhhccccchhhHHHHHH
Q 036324 52 CMFLHILAHHVKSRTIHSRFLRSRETISRYFN 83 (91)
Q Consensus 52 amFL~i~~~~~~~r~i~~~F~~S~eTisr~f~ 83 (91)
.+|.-.==.+.+.+.|...-+.|+.|+++||.
T Consensus 13 ~l~~~~G~~~~ti~~Ia~~agvs~~~ly~~F~ 44 (72)
T d2g3ba1 13 TAIAQRGIRGLRVNDVAEVAGVSPGLLYYHFK 44 (72)
T ss_dssp HHHHHHHHHHCCHHHHHHHHTSCHHHHHHHHC
T ss_pred HHHHHhCcccCCHHHHHHHhCcCHHHHHHHCc
Confidence 33333333558999999999999999999994
No 88
>d2ev0a1 a.4.5.24 (A:2-62) Manganese transport regulator MntR {Bacillus subtilis [TaxId: 1423]}
Probab=66.45 E-value=2 Score=23.08 Aligned_cols=28 Identities=4% Similarity=0.043 Sum_probs=23.9
Q ss_pred hcCcchhhhhhccccchhhHHHHHHHHH
Q 036324 59 AHHVKSRTIHSRFLRSRETISRYFNLVL 86 (91)
Q Consensus 59 ~~~~~~r~i~~~F~~S~eTisr~f~~Vl 86 (91)
+...+..+|+..++.|..||+..++..-
T Consensus 19 ~~~v~~~~iA~~L~vs~~SVs~mikrL~ 46 (61)
T d2ev0a1 19 KGYARVSDIAEALAVHPSSVTKMVQKLD 46 (61)
T ss_dssp HSSCCHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred CCCccHHHHHHHhCCCchhHHHHHHHHH
Confidence 3458899999999999999999887653
No 89
>d1vi0a1 a.4.1.9 (A:6-77) Hypothetical transcriptional regulator YsiA {Bacillus subtilis [TaxId: 1423]}
Probab=65.49 E-value=2.4 Score=22.55 Aligned_cols=24 Identities=25% Similarity=0.289 Sum_probs=21.8
Q ss_pred cCcchhhhhhccccchhhHHHHHH
Q 036324 60 HHVKSRTIHSRFLRSRETISRYFN 83 (91)
Q Consensus 60 ~~~~~r~i~~~F~~S~eTisr~f~ 83 (91)
.+.+.+.|...-|.|..|+++||.
T Consensus 20 ~~~ti~~Ia~~agvs~~~~y~~F~ 43 (72)
T d1vi0a1 20 HQSQVSKIAKQAGVADGTIYLYFK 43 (72)
T ss_dssp GGCCHHHHHHHHTSCHHHHHHHCS
T ss_pred ccccHHHHHHHHCcCHHHHHHHCc
Confidence 568899999999999999999985
No 90
>d1jt6a1 a.4.1.9 (A:2-72) Multidrug binding protein QacR {Staphylococcus aureus [TaxId: 1280]}
Probab=65.31 E-value=4.4 Score=21.44 Aligned_cols=26 Identities=12% Similarity=0.013 Sum_probs=22.7
Q ss_pred hcCcchhhhhhccccchhhHHHHHHH
Q 036324 59 AHHVKSRTIHSRFLRSRETISRYFNL 84 (91)
Q Consensus 59 ~~~~~~r~i~~~F~~S~eTisr~f~~ 84 (91)
=++.+.+.|...=|.|+.|+++||..
T Consensus 19 ~~~~s~~~Ia~~agvs~~~~y~~F~~ 44 (71)
T d1jt6a1 19 YNATTTGEIVKLSESSKGNLYYHFKT 44 (71)
T ss_dssp TTTCCHHHHHHHTTCCHHHHHHHHSS
T ss_pred ccccCHHHHHHHHCcCHhHHHHHCcC
Confidence 35688999999999999999999953
No 91
>d2d6ya1 a.4.1.9 (A:7-74) Putative regulator SCO4008 {Streptomyces coelicolor [TaxId: 1902]}
Probab=65.12 E-value=4.5 Score=21.44 Aligned_cols=34 Identities=12% Similarity=0.157 Sum_probs=26.8
Q ss_pred HHHHHHHHhhcCcchhhhhhccccchhhHHHHHH
Q 036324 50 QLCMFLHILAHHVKSRTIHSRFLRSRETISRYFN 83 (91)
Q Consensus 50 ~vamFL~i~~~~~~~r~i~~~F~~S~eTisr~f~ 83 (91)
.+.+|--.=-.+.+.++|...=+.|+.|+++||.
T Consensus 11 a~~l~~~~G~~~~ti~~Ia~~agvs~~~~Y~~F~ 44 (68)
T d2d6ya1 11 AVAEFARHGIAGARIDRIAAEARANKQLIYAYYG 44 (68)
T ss_dssp HHHHHHHHTTTSCCHHHHHHHHTCCHHHHHHHHS
T ss_pred HHHHHHHhCccccCHHHHHHHHCcchhHHHHHCc
Confidence 3444444445668999999999999999999995
No 92
>d2o38a1 a.35.1.13 (A:28-116) Hypothetical protein RPA3824 {Rhodopseudomonas palustris [TaxId: 1076]}
Probab=64.99 E-value=1.6 Score=24.81 Aligned_cols=28 Identities=14% Similarity=0.074 Sum_probs=24.6
Q ss_pred HHhhcCcchhhhhhccccchhhHHHHHH
Q 036324 56 HILAHHVKSRTIHSRFLRSRETISRYFN 83 (91)
Q Consensus 56 ~i~~~~~~~r~i~~~F~~S~eTisr~f~ 83 (91)
.+-..|.+++++++..|.|..|||++-+
T Consensus 19 ~r~~~gltq~~lA~~~gis~~~is~ie~ 46 (89)
T d2o38a1 19 VIDRARLSQAAAAARLGINQPKVSALRN 46 (89)
T ss_dssp HHHHTTCCHHHHHHHHTCCHHHHHHHHT
T ss_pred HHHHcCCCHHHHHHHHHhhHhHHHHHHc
Confidence 4567889999999999999999999864
No 93
>d2a61a1 a.4.5.28 (A:5-143) Transcriptional regulator TM0710 {Thermotoga maritima [TaxId: 2336]}
Probab=64.70 E-value=6.9 Score=22.99 Aligned_cols=44 Identities=2% Similarity=-0.055 Sum_probs=32.2
Q ss_pred CccHHHHHHHHHHHhhcCcchhhhhhccccchhhHHHHHHHHHH
Q 036324 44 TVSIEEQLCMFLHILAHHVKSRTIHSRFLRSRETISRYFNLVLN 87 (91)
Q Consensus 44 ~v~veE~vamFL~i~~~~~~~r~i~~~F~~S~eTisr~f~~Vl~ 87 (91)
+++..+-.++..-.-..+.+..+|+...+.+++||++..+...+
T Consensus 27 glt~~q~~iL~~i~~~~~~t~~~la~~l~i~~~tvs~~l~~L~~ 70 (139)
T d2a61a1 27 GITPAQFDILQKIYFEGPKRPGELSVLLGVAKSTVTGLVKRLEA 70 (139)
T ss_dssp TCCHHHHHHHHHHHHHCCBCHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHcCCCCHHHHHHHhCCCcccchHHHHHHHh
Confidence 35666554444433344688999999999999999999887543
No 94
>d1ulya_ a.4.5.58 (A:) Hypothetical protein PH1932 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=64.30 E-value=4.1 Score=25.46 Aligned_cols=30 Identities=10% Similarity=0.104 Sum_probs=25.5
Q ss_pred hcCcchhhhhhccccchhhHHHHHHHHHHH
Q 036324 59 AHHVKSRTIHSRFLRSRETISRYFNLVLNA 88 (91)
Q Consensus 59 ~~~~~~r~i~~~F~~S~eTisr~f~~Vl~a 88 (91)
-...+..+|+..++.|.+|||+|....-+|
T Consensus 30 ~~~~s~~ela~~lg~s~~~v~~hl~~L~~~ 59 (190)
T d1ulya_ 30 NKEMTISQLSEILGKTPQTIYHHIEKLKEA 59 (190)
T ss_dssp TCCBCHHHHHHHHTCCHHHHHHHHHHHHHT
T ss_pred hCCCCHHHHHHHHCcCHHHHHHHHHHHHHC
Confidence 446888999999999999999999876554
No 95
>d2fd5a1 a.4.1.9 (A:1-76) Probable transcriptional regulator PA3133 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=63.69 E-value=2.5 Score=22.79 Aligned_cols=34 Identities=9% Similarity=-0.131 Sum_probs=26.4
Q ss_pred HHHHHHHHhhcCcchhhhhhccccchhhHHHHHH
Q 036324 50 QLCMFLHILAHHVKSRTIHSRFLRSRETISRYFN 83 (91)
Q Consensus 50 ~vamFL~i~~~~~~~r~i~~~F~~S~eTisr~f~ 83 (91)
...+|.-.--.+.+.+.|...=|.|..|+++||.
T Consensus 16 a~~l~~~~G~~~~si~~Ia~~agvs~~t~Y~~F~ 49 (76)
T d2fd5a1 16 ATQALLERGAVEPSVGEVMGAAGLTVGGFYAHFQ 49 (76)
T ss_dssp HHHHHHHHTTTSCCHHHHHHHTTCCGGGGGGTCS
T ss_pred HHHHHHHhCcccccHHHHHHHhCCCccchhhcCC
Confidence 4445555555668889999999999999999984
No 96
>d1zk8a1 a.4.1.9 (A:6-77) Transcriptional regulator BC5000 {Bacillus cereus [TaxId: 1396]}
Probab=63.61 E-value=1.6 Score=23.47 Aligned_cols=35 Identities=3% Similarity=-0.132 Sum_probs=27.2
Q ss_pred HHHHHHHHHhhcCcchhhhhhccccchhhHHHHHH
Q 036324 49 EQLCMFLHILAHHVKSRTIHSRFLRSRETISRYFN 83 (91)
Q Consensus 49 E~vamFL~i~~~~~~~r~i~~~F~~S~eTisr~f~ 83 (91)
....+|.----.+.+.+.|..+-+.|..|+++||.
T Consensus 11 aa~~l~~~~G~~~~t~~~Ia~~agvs~~slY~yF~ 45 (72)
T d1zk8a1 11 TAAEIADANGVQEVTLASLAQTLGVRSPSLYNHVK 45 (72)
T ss_dssp HHHHHHHHHCGGGCCHHHHHHHHTSCHHHHTTTCS
T ss_pred HHHHHHHHhCCCcccHHHHHHHhCCCHHHHHHHCc
Confidence 34444554455678999999999999999999984
No 97
>d1z0xa1 a.4.1.9 (A:4-71) Transcriptional regulator EF0787 {Enterococcus faecalis [TaxId: 1351]}
Probab=62.38 E-value=0.83 Score=24.67 Aligned_cols=23 Identities=17% Similarity=0.317 Sum_probs=21.2
Q ss_pred CcchhhhhhccccchhhHHHHHH
Q 036324 61 HVKSRTIHSRFLRSRETISRYFN 83 (91)
Q Consensus 61 ~~~~r~i~~~F~~S~eTisr~f~ 83 (91)
+.+.++|...=|.|..|+++||.
T Consensus 23 ~~t~~~Ia~~agvs~~~iy~hF~ 45 (68)
T d1z0xa1 23 QLSMRKVAKQLGVQAPAIYWYFK 45 (68)
T ss_dssp GCCHHHHHHHHTSCHHHHHTTCS
T ss_pred ccCHHHHHHHHCcchhHHHHhcC
Confidence 57999999999999999999984
No 98
>d1t33a1 a.4.1.9 (A:1-88) Putative transcriptional repressor YbiH {Salmonella typhimurium [TaxId: 90371]}
Probab=61.80 E-value=2.1 Score=23.91 Aligned_cols=25 Identities=24% Similarity=0.347 Sum_probs=21.4
Q ss_pred hcCcchhhhhhccccchhhHHHHHH
Q 036324 59 AHHVKSRTIHSRFLRSRETISRYFN 83 (91)
Q Consensus 59 ~~~~~~r~i~~~F~~S~eTisr~f~ 83 (91)
|-..+.++|...-|.|..|+++||.
T Consensus 29 G~~~t~~~Ia~~agvs~~~~Y~~F~ 53 (88)
T d1t33a1 29 GLHATTRDIAALAGQNIAAITYYFG 53 (88)
T ss_dssp GGGSCHHHHHHHHTSCHHHHHHHHS
T ss_pred ccccCHHHHHHHhCCChhhhhccCC
Confidence 4445788999999999999999995
No 99
>d1vola2 a.74.1.2 (A:208-316) Transcription factor IIB (TFIIB), core domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=60.42 E-value=12 Score=21.37 Aligned_cols=73 Identities=11% Similarity=0.040 Sum_probs=45.2
Q ss_pred HHHHHhCCCHHHHHHHHHH---HHhCCCCCCCCCccHHHHHHHHHHH--hhcCcchhhhhhccccchhhHHHHHHHHHH
Q 036324 14 ECVNQLRMDKRTFELLCGL---LRINGGLKADGTVSIEEQLCMFLHI--LAHHVKSRTIHSRFLRSRETISRYFNLVLN 87 (91)
Q Consensus 14 ~c~~~fRM~~~~F~~L~~~---L~~~~~l~~s~~v~veE~vamFL~i--~~~~~~~r~i~~~F~~S~eTisr~f~~Vl~ 87 (91)
+.-+.+.++.++-..-.+. +.+.+ +...+....-=.-++|+-. .+.+-+.++|++-++.|..||.+.+++...
T Consensus 10 Rf~s~L~L~~~i~~~A~~i~~~~~~~~-~~~Gr~p~~iaAa~iY~a~r~~~~~~t~~eIa~~~~vs~~tI~k~yk~l~~ 87 (109)
T d1vola2 10 RFCSNLCLPKQVQMAATHIARKAVELD-LVPGRSPISVAAAAIYMASQASAEKRTQKEIGDIAGVADVTIRQSYRLIYP 87 (109)
T ss_dssp HHHHHHTCCHHHHHHHHHHHHHHHHTT-CSTTCCHHHHHHHHHHHHHHTSSSCCCHHHHHHHHTCCHHHHHHHHHHHGG
T ss_pred HHHHHcCcCHHHHHHHHHHHHHHHHcC-CcCCCCHHHHHHHHHHHHHHHcCCCCCHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 4456677777665444444 44444 4444443333333343322 345578899999999999999999887643
No 100
>d2iu5a1 a.4.1.9 (A:1-71) Transcriptional activator DhaS {Lactococcus lactis [TaxId: 1358]}
Probab=60.00 E-value=1 Score=24.41 Aligned_cols=24 Identities=25% Similarity=0.400 Sum_probs=20.8
Q ss_pred cCcchhhhhhccccchhhHHHHHH
Q 036324 60 HHVKSRTIHSRFLRSRETISRYFN 83 (91)
Q Consensus 60 ~~~~~r~i~~~F~~S~eTisr~f~ 83 (91)
.+.+.++|..+-|.|+.|+++||.
T Consensus 25 ~~~sv~~Ia~~agvs~~t~Y~~F~ 48 (71)
T d2iu5a1 25 HQISVSDIMQTAKIRRQTFYNYFQ 48 (71)
T ss_dssp GGCCHHHHHHHHTSCGGGGGGTCS
T ss_pred ccCCHHHHHHHhCccccHHHHHcC
Confidence 347888999999999999999985
No 101
>d3c07a1 a.4.1.9 (A:15-89) Putative transcriptional regulator SCO4850 {Streptomyces coelicolor [TaxId: 1902]}
Probab=59.89 E-value=3.1 Score=22.18 Aligned_cols=33 Identities=18% Similarity=0.105 Sum_probs=24.8
Q ss_pred HHHHHHHhhcCcchhhhhhccccchhhHHHHHH
Q 036324 51 LCMFLHILAHHVKSRTIHSRFLRSRETISRYFN 83 (91)
Q Consensus 51 vamFL~i~~~~~~~r~i~~~F~~S~eTisr~f~ 83 (91)
+.+|.-.--.+.+.++|...=|.|..|+++||.
T Consensus 15 ~~l~~~~G~~~~t~~~Ia~~agvs~~~~y~~F~ 47 (75)
T d3c07a1 15 MRLFQERGYDRTTMRAIAQEAGVSVGNAYYYFA 47 (75)
T ss_dssp HHHHHHTCSTTCCHHHHHHHHTSCHHHHHHHCS
T ss_pred HHHHHHhCcccCCHHHHHHHHCcCHHHHHHHCc
Confidence 334443333568889999999999999999984
No 102
>d2croa_ a.35.1.2 (A:) cro 434 {Bacteriophage 434 [TaxId: 10712]}
Probab=59.44 E-value=2.4 Score=22.34 Aligned_cols=26 Identities=8% Similarity=0.065 Sum_probs=21.8
Q ss_pred hhcCcchhhhhhccccchhhHHHHHH
Q 036324 58 LAHHVKSRTIHSRFLRSRETISRYFN 83 (91)
Q Consensus 58 ~~~~~~~r~i~~~F~~S~eTisr~f~ 83 (91)
-..|.+..+++...+.|..||+++-+
T Consensus 13 ~~~gltq~~lA~~~gvs~~ti~~~E~ 38 (65)
T d2croa_ 13 IALKMTQTELATKAGVKQQSIQLIEA 38 (65)
T ss_dssp HHTTCCHHHHHHHHTSCHHHHHHHHT
T ss_pred HHcCCCHHHHHHHHCcCHhHHHHHHC
Confidence 45678899999999999999999743
No 103
>d3broa1 a.4.5.28 (A:3-137) Transcriptional regulator OEOE1854 {Oenococcus oeni [TaxId: 1247]}
Probab=58.84 E-value=8.1 Score=22.40 Aligned_cols=42 Identities=14% Similarity=0.148 Sum_probs=29.9
Q ss_pred ccHHH-HHHHHHHHh-hcCcchhhhhhccccchhhHHHHHHHHH
Q 036324 45 VSIEE-QLCMFLHIL-AHHVKSRTIHSRFLRSRETISRYFNLVL 86 (91)
Q Consensus 45 v~veE-~vamFL~i~-~~~~~~r~i~~~F~~S~eTisr~f~~Vl 86 (91)
++..+ .+-.+|+.- +.+.+.++|+...+.+++|||+..+..-
T Consensus 27 lt~~q~~vL~~l~~~~~~~it~~ela~~~~~~~~~vs~~l~~L~ 70 (135)
T d3broa1 27 LTGTQMTIIDYLSRNKNKEVLQRDLESEFSIKSSTATVLLQRME 70 (135)
T ss_dssp CCHHHHHHHHHHHHTTTSCCBHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcCCCCCCHHHHHHHHCcCHhHHHHHHHHHH
Confidence 44444 344455553 2347999999999999999999877653
No 104
>d2np5a1 a.4.1.9 (A:9-77) Transcriptional regulator RHA1_ro04179 {Rhodococcus sp. [TaxId: 1831]}
Probab=58.53 E-value=1.6 Score=23.12 Aligned_cols=24 Identities=17% Similarity=0.117 Sum_probs=21.7
Q ss_pred hcCcchhhhhhccccchhhHHHHH
Q 036324 59 AHHVKSRTIHSRFLRSRETISRYF 82 (91)
Q Consensus 59 ~~~~~~r~i~~~F~~S~eTisr~f 82 (91)
-.+.+.+.|...=|.|..||++||
T Consensus 19 ~~~~ti~~Ia~~agvs~~~iy~~F 42 (69)
T d2np5a1 19 LEGASVREVAKRAGVSIGAVQHHF 42 (69)
T ss_dssp GGGCCHHHHHHHHTCCHHHHHHHC
T ss_pred ccccCHHHHHHHhCCCHHHHHHHC
Confidence 356899999999999999999999
No 105
>d2fbha1 a.4.5.28 (A:8-144) Transcriptional regulator PA3341 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=58.23 E-value=6.1 Score=23.08 Aligned_cols=27 Identities=11% Similarity=0.096 Sum_probs=23.1
Q ss_pred cCcchhhhhhccccchhhHHHHHHHHH
Q 036324 60 HHVKSRTIHSRFLRSRETISRYFNLVL 86 (91)
Q Consensus 60 ~~~~~r~i~~~F~~S~eTisr~f~~Vl 86 (91)
.+.+..+++..++.+++|||+.+...-
T Consensus 42 ~~~t~~~la~~~~~~~~~vs~~v~~L~ 68 (137)
T d2fbha1 42 DSPTQRELAQSVGVEGPTLARLLDGLE 68 (137)
T ss_dssp SCCBHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHCCCHHHHHHHHHHHH
Confidence 346888999999999999999987654
No 106
>d1utxa_ a.35.1.3 (A:) Putative transcription regulator CylR2 {Enterococcus faecalis [TaxId: 1351]}
Probab=57.99 E-value=2.6 Score=22.29 Aligned_cols=27 Identities=15% Similarity=0.101 Sum_probs=23.1
Q ss_pred HhhcCcchhhhhhccccchhhHHHHHH
Q 036324 57 ILAHHVKSRTIHSRFLRSRETISRYFN 83 (91)
Q Consensus 57 i~~~~~~~r~i~~~F~~S~eTisr~f~ 83 (91)
...+|.+..+++..-|.|.+|+|++-+
T Consensus 10 R~~~g~tq~elA~~~gis~~~is~~e~ 36 (66)
T d1utxa_ 10 REKKKISQSELAALLEVSRQTINGIEK 36 (66)
T ss_dssp HHHTTCCHHHHHHHHTSCHHHHHHHHT
T ss_pred HHHcCCCHHHHHHhcccCHHHHHHHHc
Confidence 456788999999999999999999854
No 107
>d1rkta1 a.4.1.9 (A:2-82) Hypothetical transcriptional regulator YfiR {Bacillus subtilis [TaxId: 1423]}
Probab=57.82 E-value=2.6 Score=22.98 Aligned_cols=37 Identities=16% Similarity=0.117 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHhhcCcchhhhhhccccchhhHHHHHH
Q 036324 47 IEEQLCMFLHILAHHVKSRTIHSRFLRSRETISRYFN 83 (91)
Q Consensus 47 veE~vamFL~i~~~~~~~r~i~~~F~~S~eTisr~f~ 83 (91)
++....+|.-.--.+.+.+.|...=|.|..|+++||.
T Consensus 17 l~aa~~l~~~~G~~~~ti~~Ia~~agvs~~t~Y~~F~ 53 (81)
T d1rkta1 17 LEAAKTVFKRKGFELTTMKDVVEESGFSRGGVYLYFS 53 (81)
T ss_dssp HHHHHHHHHHHCSTTCCHHHHHHHHTSCHHHHHTTCS
T ss_pred HHHHHHHHHHhCcccCCHHHHHHHhCcCHHHHHHHCc
Confidence 3444455555545678999999999999999999985
No 108
>d1hw1a1 a.4.5.6 (A:5-78) Fatty acid responsive transcription factor FadR, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=57.45 E-value=3.8 Score=22.50 Aligned_cols=41 Identities=10% Similarity=0.118 Sum_probs=27.8
Q ss_pred HHHHHHHhCCCCCCCCCccHHHHHHHHHHHhhcCcchhhhhhccccchhhHHHHHHHH
Q 036324 28 LLCGLLRINGGLKADGTVSIEEQLCMFLHILAHHVKSRTIHSRFLRSRETISRYFNLV 85 (91)
Q Consensus 28 ~L~~~L~~~~~l~~s~~v~veE~vamFL~i~~~~~~~r~i~~~F~~S~eTisr~f~~V 85 (91)
.|.+.+.. +.+++...++.+ |.++..|+.|+.||.+-+...
T Consensus 11 ~i~~~I~~-g~~~~G~~LPs~----------------~eLa~~~~vSr~tvr~Al~~L 51 (74)
T d1hw1a1 11 YIIESIWN-NRFPPGTILPAE----------------RELSELIGVTRTTLREVLQRL 51 (74)
T ss_dssp HHHHHHHT-TSSCTTSBCCCH----------------HHHHHHHTCCHHHHHHHHHHH
T ss_pred HHHHHHHc-CCCCCcCCCccH----------------HHHHHHHCCCHHHHHHHHHHH
Confidence 44444444 556666556544 456789999999998887764
No 109
>d2o5ha1 d.363.1.1 (A:1-131) Hypothetical protein NMB0513 {Neisseria meningitidis [TaxId: 487]}
Probab=57.14 E-value=3.8 Score=25.66 Aligned_cols=34 Identities=26% Similarity=0.198 Sum_probs=26.7
Q ss_pred CHHHHHHHHHHHHhCCCCCCCC-----CccHHHHHHHHH
Q 036324 22 DKRTFELLCGLLRINGGLKADG-----TVSIEEQLCMFL 55 (91)
Q Consensus 22 ~~~~F~~L~~~L~~~~~l~~s~-----~v~veE~vamFL 55 (91)
.++.|+.|...|-..|.|+--+ .-+++|||.||=
T Consensus 48 rk~~Ff~ll~kLl~eG~LKLA~~G~fl~Gt~eEqVemFR 86 (131)
T d2o5ha1 48 KTEAFFILFKELLRRGHLKLQRDGQIIGHTPEEWEQIFR 86 (131)
T ss_dssp HHHHHHHHHHHHHHTTSEEEEETTEECCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcChhhhccCCcccCCCHHHHHHHHH
Confidence 4678999999998888775432 578999999984
No 110
>d1sfxa_ a.4.5.50 (A:) Hypothetical protein AF2008 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=56.85 E-value=8.6 Score=21.98 Aligned_cols=53 Identities=13% Similarity=0.083 Sum_probs=37.2
Q ss_pred HHHHHHHHhCCCCCCCCCccHHHHHHHHHHHhhcCcchhhhhhccccchhhHHHHHHHHH
Q 036324 27 ELLCGLLRINGGLKADGTVSIEEQLCMFLHILAHHVKSRTIHSRFLRSRETISRYFNLVL 86 (91)
Q Consensus 27 ~~L~~~L~~~~~l~~s~~v~veE~vamFL~i~~~~~~~r~i~~~F~~S~eTisr~f~~Vl 86 (91)
-+|.+.|++ .||.+ .+-++-..|+.. .+.+...|+...+.++.||++.+...-
T Consensus 7 ~~l~~~L~~-lGlt~-----~e~~v~~~L~~~-g~~t~~eia~~~~i~~~~v~~~l~~L~ 59 (109)
T d1sfxa_ 7 GELVKALEK-LSFKP-----SDVRIYSLLLER-GGMRVSEIARELDLSARFVRDRLKVLL 59 (109)
T ss_dssp HHHHHHHHH-TCCCH-----HHHHHHHHHHHH-CCBCHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHH-cCCCH-----HHHHHHHHHHhc-CCCCHHHHHHHhCCCcchHHHHHHHHH
Confidence 467778877 44543 333444444433 358999999999999999999887654
No 111
>d2icta1 a.35.1.3 (A:8-94) Antitoxin HigA {Escherichia coli [TaxId: 562]}
Probab=56.78 E-value=3.5 Score=23.19 Aligned_cols=28 Identities=18% Similarity=0.135 Sum_probs=24.2
Q ss_pred HHhhcCcchhhhhhccccchhhHHHHHH
Q 036324 56 HILAHHVKSRTIHSRFLRSRETISRYFN 83 (91)
Q Consensus 56 ~i~~~~~~~r~i~~~F~~S~eTisr~f~ 83 (91)
++-.+|.+.+.++...|.|..|||++.+
T Consensus 9 ~r~~~glsq~~LA~~lGvs~~~is~ie~ 36 (87)
T d2icta1 9 SLDELNVSLREFARAMEIAPSTASRLLT 36 (87)
T ss_dssp HHHHHTCCHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHcCCCHHHHHHHHhhcHHHHHHHHH
Confidence 3456789999999999999999999865
No 112
>d2np3a1 a.4.1.9 (A:35-99) Putative transcriptional regulator SCO0857 {Streptomyces coelicolor [TaxId: 1902]}
Probab=56.12 E-value=0.81 Score=24.58 Aligned_cols=24 Identities=8% Similarity=0.163 Sum_probs=1.4
Q ss_pred cCcchhhhhhccccchhhHHHHHH
Q 036324 60 HHVKSRTIHSRFLRSRETISRYFN 83 (91)
Q Consensus 60 ~~~~~r~i~~~F~~S~eTisr~f~ 83 (91)
++.+.++|...=+.|+.|+++||.
T Consensus 15 ~~~s~~~IA~~agvs~~~ly~~F~ 38 (65)
T d2np3a1 15 DATSLRRIAETAGVDQSLVHHFYG 38 (65)
T ss_dssp ----------------------CC
T ss_pred ccCCHHHHHHHHCcCHHHHHHHCC
Confidence 468899999999999999999984
No 113
>d1lmb3_ a.35.1.2 (3:) lambda C1 repressor, DNA-binding domain {Bacteriophage lambda [TaxId: 10710]}
Probab=56.03 E-value=2.7 Score=23.65 Aligned_cols=26 Identities=4% Similarity=0.098 Sum_probs=22.6
Q ss_pred HhhcCcchhhhhhccccchhhHHHHH
Q 036324 57 ILAHHVKSRTIHSRFLRSRETISRYF 82 (91)
Q Consensus 57 i~~~~~~~r~i~~~F~~S~eTisr~f 82 (91)
.-..|.+..+++...|.|..||+++-
T Consensus 21 R~~~gltq~~lA~~lgis~~~is~~E 46 (87)
T d1lmb3_ 21 KNELGLSQESVADKMGMGQSGVGALF 46 (87)
T ss_dssp HHHHTCCHHHHHHHHTSCHHHHHHHH
T ss_pred HHHcCCCHHHHHHHhCccHHHHHHHH
Confidence 34578899999999999999999984
No 114
>d2fq4a1 a.4.1.9 (A:9-77) Transcriptional regulator BC3163 {Bacillus cereus [TaxId: 1396]}
Probab=55.21 E-value=5.1 Score=21.25 Aligned_cols=33 Identities=21% Similarity=0.179 Sum_probs=25.4
Q ss_pred HHHHHHhhcCcchhhhhhccccchhhHHHHHHH
Q 036324 52 CMFLHILAHHVKSRTIHSRFLRSRETISRYFNL 84 (91)
Q Consensus 52 amFL~i~~~~~~~r~i~~~F~~S~eTisr~f~~ 84 (91)
.+|.-.=-.+.+.+.|..+=|.|+.|+++||..
T Consensus 15 ~l~~~~G~~~~t~~~Ia~~agvs~~~~y~~F~~ 47 (69)
T d2fq4a1 15 ELLLESGFKAVTVDKIAERAKVSKATIYKWWPN 47 (69)
T ss_dssp HHHHHHCTTTCCHHHHHHHHTCCHHHHHHHCSS
T ss_pred HHHHHhCcccCCHHHHHHHHCcCHHHHHHHCCC
Confidence 334444445688999999999999999999853
No 115
>d1ui5a1 a.4.1.9 (A:5-75) A-factor receptor homolog CprB {Streptomyces coelicolor [TaxId: 1902]}
Probab=55.07 E-value=5.1 Score=21.27 Aligned_cols=34 Identities=9% Similarity=-0.077 Sum_probs=26.4
Q ss_pred HHHHHHHHhhcCcchhhhhhccccchhhHHHHHH
Q 036324 50 QLCMFLHILAHHVKSRTIHSRFLRSRETISRYFN 83 (91)
Q Consensus 50 ~vamFL~i~~~~~~~r~i~~~F~~S~eTisr~f~ 83 (91)
.+.+|.-.=-++.+.++|...=|.|..|++.||.
T Consensus 14 a~~l~~~~G~~~~si~~Ia~~agvs~~~~y~~F~ 47 (71)
T d1ui5a1 14 AADLFDRRGYESTTLSEIVAHAGVTKGALYFHFA 47 (71)
T ss_dssp HHHHHHHHCTTTCCHHHHHHHHTCCHHHHHHHCS
T ss_pred HHHHHHHhCccccCHHHHHHHHCcCHhHHHHHCc
Confidence 3344444444668999999999999999999995
No 116
>d2hyja1 a.4.1.9 (A:8-82) Putative transcriptional regulator SCO4940 {Streptomyces coelicolor [TaxId: 1902]}
Probab=55.00 E-value=3.1 Score=22.44 Aligned_cols=25 Identities=8% Similarity=0.174 Sum_probs=21.9
Q ss_pred hcCcchhhhhhccccchhhHHHHHH
Q 036324 59 AHHVKSRTIHSRFLRSRETISRYFN 83 (91)
Q Consensus 59 ~~~~~~r~i~~~F~~S~eTisr~f~ 83 (91)
-.+.+.++|...-|.|..|+++||.
T Consensus 23 ~~~~t~~~Ia~~agvs~~~~Y~~F~ 47 (75)
T d2hyja1 23 LDGITIGRLAEELEMSKSGVHKHFG 47 (75)
T ss_dssp GGGCCHHHHHHHHTCCHHHHHTTCS
T ss_pred cccCcHHHHHHHHCcCHHHHHHHCc
Confidence 3568899999999999999999984
No 117
>d1s3ja_ a.4.5.28 (A:) Putative transcriptional regulator YusO {Bacillus subtilis [TaxId: 1423]}
Probab=54.55 E-value=17 Score=21.14 Aligned_cols=59 Identities=10% Similarity=0.047 Sum_probs=37.5
Q ss_pred CCCHHHHHHHHHHHHhCCCCCCCCCccHHHHHH-HHHHHhhcCcchhhhhhccccchhhHHHHHHHHH
Q 036324 20 RMDKRTFELLCGLLRINGGLKADGTVSIEEQLC-MFLHILAHHVKSRTIHSRFLRSRETISRYFNLVL 86 (91)
Q Consensus 20 RM~~~~F~~L~~~L~~~~~l~~s~~v~veE~va-mFL~i~~~~~~~r~i~~~F~~S~eTisr~f~~Vl 86 (91)
++.+.....+...|.. ++ ++..+--. .+|+.- .+.+..+++...+.|+.||++..+..-
T Consensus 15 ~l~~~~~~~~~~~l~~-~g------lt~~q~~iL~~l~~~-~~~t~~~la~~~~i~~~~vs~~l~~L~ 74 (143)
T d1s3ja_ 15 ALFQKIQPEMLESMEK-QG------VTPAQLFVLASLKKH-GSLKVSEIAERMEVKPSAVTLMADRLE 74 (143)
T ss_dssp HHHHHHHHHHHHHHHH-TT------CCHHHHHHHHHHHHH-SEEEHHHHHHHHTSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-cC------CCHHHHHHHHHHHHC-CCCCHHHHHHHHCcCHHHHHHHHHHHH
Confidence 3334455555555654 32 34433332 334332 368999999999999999999987654
No 118
>d1gdta1 a.4.1.2 (A:141-183) gamma,delta resolvase (C-terminal domain) {Escherichia coli [TaxId: 562]}
Probab=54.22 E-value=3.2 Score=21.24 Aligned_cols=26 Identities=15% Similarity=0.183 Sum_probs=23.1
Q ss_pred hcCcchhhhhhccccchhhHHHHHHH
Q 036324 59 AHHVKSRTIHSRFLRSRETISRYFNL 84 (91)
Q Consensus 59 ~~~~~~r~i~~~F~~S~eTisr~f~~ 84 (91)
..+..-..|+...+.|+.||+|.+++
T Consensus 16 ~~G~gat~IAk~lgI~R~SVYR~L~~ 41 (43)
T d1gdta1 16 QQGLGASHISKTMNIARSTVYKVINE 41 (43)
T ss_dssp HTTCCHHHHHHHHTCCHHHHHHHHHS
T ss_pred HcCCCHHHHHHHHCCCHHHHHHHHhh
Confidence 57788899999999999999998764
No 119
>d2fxaa1 a.4.5.28 (A:6-167) Protease production regulatory protein Hpr {Bacillus subtilis [TaxId: 1423]}
Probab=54.14 E-value=18 Score=22.10 Aligned_cols=43 Identities=9% Similarity=0.037 Sum_probs=31.2
Q ss_pred CccHHHHHHHHHHHhhcCcchhhhhhccccchhhHHHHHHHHH
Q 036324 44 TVSIEEQLCMFLHILAHHVKSRTIHSRFLRSRETISRYFNLVL 86 (91)
Q Consensus 44 ~v~veE~vamFL~i~~~~~~~r~i~~~F~~S~eTisr~f~~Vl 86 (91)
+++..|-..+.+-.-..+.+..+|+...+.+++|||+.+...-
T Consensus 38 ~Lt~~q~~vL~~l~~~~~~t~~~la~~~~l~~~tvs~~i~rL~ 80 (162)
T d2fxaa1 38 DLNINEHHILWIAYQLNGASISEIAKFGVMHVSTAFNFSKKLE 80 (162)
T ss_dssp TCCHHHHHHHHHHHHHTSEEHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHhhhccCCCcCHHHHHHHHcCCchhhHHHHHHHH
Confidence 4677775443322223357999999999999999999987654
No 120
>d2oi8a1 a.4.1.9 (A:8-86) Putative regulatory protein Sco4313 {Streptomyces coelicolor [TaxId: 1902]}
Probab=53.83 E-value=4 Score=22.07 Aligned_cols=31 Identities=23% Similarity=0.247 Sum_probs=24.4
Q ss_pred HHHHHhhcCcchhhhhhccccchhhHHHHHH
Q 036324 53 MFLHILAHHVKSRTIHSRFLRSRETISRYFN 83 (91)
Q Consensus 53 mFL~i~~~~~~~r~i~~~F~~S~eTisr~f~ 83 (91)
+|.-.--.+.+.++|...=+.|..|+++||.
T Consensus 21 l~~~~G~~~~t~~~Ia~~agvs~~~~Y~~F~ 51 (79)
T d2oi8a1 21 QIATAGASALSLNAIAKRMGMSGPALYRYFD 51 (79)
T ss_dssp HHHHHCTTSCCHHHHHHHTTCCHHHHHTTCS
T ss_pred HHHHhCccccCHHHHHHHhCCCCCchhhhcC
Confidence 3333334568999999999999999999985
No 121
>d1af7a1 a.58.1.1 (A:11-91) Chemotaxis receptor methyltransferase CheR, N-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=52.63 E-value=13 Score=20.10 Aligned_cols=46 Identities=17% Similarity=0.264 Sum_probs=37.7
Q ss_pred HhCCCHHHHHHHHHHHHhCCCC--CCCCCccHHHHHHHHHHHhhcCcc
Q 036324 18 QLRMDKRTFELLCGLLRINGGL--KADGTVSIEEQLCMFLHILAHHVK 63 (91)
Q Consensus 18 ~fRM~~~~F~~L~~~L~~~~~l--~~s~~v~veE~vamFL~i~~~~~~ 63 (91)
.+-|+.+.|..+++.+..+.|+ .+.+.-.++.+|+--+-.+|-+.=
T Consensus 9 ~~~lsd~~f~~~~~~i~~~~Gi~l~~~K~~~l~~RL~~rm~~~g~~s~ 56 (81)
T d1af7a1 9 RLALSDAHFRRICQLIYQRAGIVLADHKRDMVYNRLVRRLRALGLDDF 56 (81)
T ss_dssp CCCCCHHHHHHHHHHHHHHHCCCCCGGGHHHHHHHHHHHHHHHTCCCH
T ss_pred ccCCCHHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHhCCCCH
Confidence 3568889999999999998776 566788999999998888876543
No 122
>d1i1ga1 a.4.5.32 (A:2-61) LprA {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=52.57 E-value=6.1 Score=20.64 Aligned_cols=27 Identities=7% Similarity=0.047 Sum_probs=23.5
Q ss_pred cchhhhhhccccchhhHHHHHHHHHHH
Q 036324 62 VKSRTIHSRFLRSRETISRYFNLVLNA 88 (91)
Q Consensus 62 ~~~r~i~~~F~~S~eTisr~f~~Vl~a 88 (91)
.+++.++..-+.|.+||++.+....+.
T Consensus 18 ~s~~~lA~~~gls~~~v~~Ri~~L~~~ 44 (60)
T d1i1ga1 18 TPFTEIAKKLGISETAVRKRVKALEEK 44 (60)
T ss_dssp CCHHHHHHHHTSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHCcCHHHHHHHHHHHHHC
Confidence 589999999999999999999876543
No 123
>d2cg4a1 a.4.5.32 (A:4-66) Regulatory protein AsnC {Escherichia coli [TaxId: 562]}
Probab=52.02 E-value=6.3 Score=20.71 Aligned_cols=27 Identities=19% Similarity=0.105 Sum_probs=23.3
Q ss_pred CcchhhhhhccccchhhHHHHHHHHHH
Q 036324 61 HVKSRTIHSRFLRSRETISRYFNLVLN 87 (91)
Q Consensus 61 ~~~~r~i~~~F~~S~eTisr~f~~Vl~ 87 (91)
..++++++...+.|.+||++.++..-+
T Consensus 19 r~s~~eiA~~l~ls~~~v~~Ri~rL~~ 45 (63)
T d2cg4a1 19 RTAYAELAKQFGVSPETIHVRVEKMKQ 45 (63)
T ss_dssp TSCHHHHHHHHTSCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHCcCHHHHHHHHHHHHH
Confidence 368899999999999999999887654
No 124
>d2cyya1 a.4.5.32 (A:5-64) Putative transcriptional regulator PH1519 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=51.81 E-value=6.5 Score=20.41 Aligned_cols=26 Identities=15% Similarity=0.015 Sum_probs=23.0
Q ss_pred cchhhhhhccccchhhHHHHHHHHHH
Q 036324 62 VKSRTIHSRFLRSRETISRYFNLVLN 87 (91)
Q Consensus 62 ~~~r~i~~~F~~S~eTisr~f~~Vl~ 87 (91)
.+++.++...+.|.+||++.++...+
T Consensus 18 ~s~~eiA~~l~ls~~~v~~Ri~~L~~ 43 (60)
T d2cyya1 18 APLREISKITGLAESTIHERIRKLRE 43 (60)
T ss_dssp CCHHHHHHHHCSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHCcCHHHHHHHHHHHHH
Confidence 58899999999999999999887654
No 125
>d1jgsa_ a.4.5.28 (A:) Multiple antibiotic resistance repressor, MarR {Escherichia coli [TaxId: 562]}
Probab=51.34 E-value=16 Score=21.27 Aligned_cols=43 Identities=5% Similarity=0.053 Sum_probs=30.7
Q ss_pred ccHHHHHHHHHHHhhcCcchhhhhhccccchhhHHHHHHHHHH
Q 036324 45 VSIEEQLCMFLHILAHHVKSRTIHSRFLRSRETISRYFNLVLN 87 (91)
Q Consensus 45 v~veE~vamFL~i~~~~~~~r~i~~~F~~S~eTisr~f~~Vl~ 87 (91)
++..+-..+..-....+.+..+++...+.++.||++.+....+
T Consensus 32 Lt~~q~~vL~~l~~~~~~t~~ela~~~~i~~~~vs~~v~~L~~ 74 (138)
T d1jgsa_ 32 ITAAQFKVLCSIRCAACITPVELKKVLSVDLGALTRMLDRLVC 74 (138)
T ss_dssp SCHHHHHHHHHHHHHSSBCHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHhHHhCcCCCHHHHHHHHCCCHhHHHHHHHHHhh
Confidence 5555544333333334789999999999999999999876543
No 126
>d2hs5a1 a.4.5.6 (A:25-93) Putative transcriptional regulator RHA1_ro03477 {Rhodococcus sp. RHA1 [TaxId: 101510]}
Probab=49.94 E-value=4.1 Score=21.87 Aligned_cols=43 Identities=21% Similarity=0.295 Sum_probs=28.1
Q ss_pred HHHHHHHHHHhCCCCCCCCCccHHHHHHHHHHHhhcCcchhhhhhccccchhhHHHHHHHH
Q 036324 25 TFELLCGLLRINGGLKADGTVSIEEQLCMFLHILAHHVKSRTIHSRFLRSRETISRYFNLV 85 (91)
Q Consensus 25 ~F~~L~~~L~~~~~l~~s~~v~veE~vamFL~i~~~~~~~r~i~~~F~~S~eTisr~f~~V 85 (91)
+...|.+.+.. +.+++...++ |. +++..|+.|+.||.+-+...
T Consensus 7 i~~~l~~~I~~-g~~~~G~~l~-~~----------------~La~~~~vSr~tvr~Al~~L 49 (69)
T d2hs5a1 7 VAGILRDAIID-GTFRPGARLS-EP----------------DICAALDVSRNTVREAFQIL 49 (69)
T ss_dssp HHHHHHHHHHH-TSSCTTCEEC-HH----------------HHHHHHTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHc-CCCCCcCccC-HH----------------HHHHHHCCCHHHHHHHHHHH
Confidence 44556666655 4455555565 43 45679999999998776653
No 127
>d1lj9a_ a.4.5.28 (A:) Transcriptional regulator SlyA {Enterococcus faecalis [TaxId: 1351]}
Probab=49.93 E-value=7.9 Score=22.99 Aligned_cols=26 Identities=15% Similarity=0.097 Sum_probs=22.6
Q ss_pred CcchhhhhhccccchhhHHHHHHHHH
Q 036324 61 HVKSRTIHSRFLRSRETISRYFNLVL 86 (91)
Q Consensus 61 ~~~~r~i~~~F~~S~eTisr~f~~Vl 86 (91)
+.+..+++..++.+++||++......
T Consensus 43 ~~t~~~la~~l~i~~~tvs~~l~~L~ 68 (144)
T d1lj9a_ 43 GIIQEKIAELIKVDRTTAARAIKRLE 68 (144)
T ss_dssp TEEHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHCccHhhHHHHHHHHH
Confidence 47778999999999999999987654
No 128
>d1y7ya1 a.35.1.3 (A:5-73) Restriction-modification controller protein C.AhdI {Aeromonas hydrophila [TaxId: 644]}
Probab=49.01 E-value=4.4 Score=21.43 Aligned_cols=27 Identities=11% Similarity=-0.125 Sum_probs=22.0
Q ss_pred HHhhcCcchhhhhhccccchhhHHHHH
Q 036324 56 HILAHHVKSRTIHSRFLRSRETISRYF 82 (91)
Q Consensus 56 ~i~~~~~~~r~i~~~F~~S~eTisr~f 82 (91)
..-..|.+..+++..-|.|.+||+++-
T Consensus 17 ~R~~~gltq~~lA~~~gis~~~i~~~E 43 (69)
T d1y7ya1 17 LRTAKGLSQETLAFLSGLDRSYVGGVE 43 (69)
T ss_dssp HHHHTTCCHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHcCCCHHHHHhHhCCCHHHHHHHH
Confidence 345677888899999999999999874
No 129
>d2p4wa1 a.4.5.64 (A:1-194) Transcriptional regulatory protein PF1790 {Pyrococcus furiosus [TaxId: 2261]}
Probab=48.72 E-value=9.8 Score=23.85 Aligned_cols=28 Identities=0% Similarity=0.004 Sum_probs=24.4
Q ss_pred cCcchhhhhhccccchhhHHHHHHHHHH
Q 036324 60 HHVKSRTIHSRFLRSRETISRYFNLVLN 87 (91)
Q Consensus 60 ~~~~~r~i~~~F~~S~eTisr~f~~Vl~ 87 (91)
...+..+++..++.|..||++|.+..-+
T Consensus 27 ~~~~~~ela~~l~~s~~~v~~HL~~L~~ 54 (194)
T d2p4wa1 27 RPYFVSELSRELGVGQKAVLEHLRILEE 54 (194)
T ss_dssp SCEEHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHCcCHHHHHHHHHHHHH
Confidence 4688899999999999999999987654
No 130
>d1r69a_ a.35.1.2 (A:) 434 C1 repressor, DNA-binding domain {Bacteriophage 434 [TaxId: 10712]}
Probab=47.60 E-value=4.9 Score=20.75 Aligned_cols=26 Identities=8% Similarity=0.176 Sum_probs=20.5
Q ss_pred hhcCcchhhhhhccccchhhHHHHHH
Q 036324 58 LAHHVKSRTIHSRFLRSRETISRYFN 83 (91)
Q Consensus 58 ~~~~~~~r~i~~~F~~S~eTisr~f~ 83 (91)
-..|.+..+++..-+.|..||+++-+
T Consensus 11 ~~~g~sq~elA~~~gvs~~~is~~E~ 36 (63)
T d1r69a_ 11 IQLGLNQAELAQKVGTTQQSIEQLEN 36 (63)
T ss_dssp HHTTCCHHHHHHHHTSCHHHHHHHHT
T ss_pred HHcCCcHHHHHHHhCcCHHHHHHHHC
Confidence 34677888888888899999988753
No 131
>d2g7la1 a.4.1.9 (A:16-83) Putative transcriptional regulator SCO7704 {Streptomyces coelicolor [TaxId: 1902]}
Probab=47.11 E-value=5.2 Score=21.14 Aligned_cols=34 Identities=9% Similarity=0.107 Sum_probs=25.9
Q ss_pred HHHHHHHHhhcCcchhhhhhccccchhhHHHHHH
Q 036324 50 QLCMFLHILAHHVKSRTIHSRFLRSRETISRYFN 83 (91)
Q Consensus 50 ~vamFL~i~~~~~~~r~i~~~F~~S~eTisr~f~ 83 (91)
...+|.-.=-.+.+.+.|...=+.|..|+++||.
T Consensus 13 a~~l~~~~g~~~~si~~ia~~~gvs~~~~y~hF~ 46 (68)
T d2g7la1 13 AVALMRAEGLEKVTMRRLAQELDTGPASLYVYVA 46 (68)
T ss_dssp HHHHHHHHCSSSCCHHHHHHHTTSCHHHHTTTCC
T ss_pred HHHHHHHhCcccCCHHHHHHHHCcCHhHhhHHCc
Confidence 3344444444568999999999999999999984
No 132
>d1b0na2 a.35.1.3 (A:1-68) SinR repressor, DNA-binding domain {Bacillus subtilis [TaxId: 1423]}
Probab=46.31 E-value=6.6 Score=20.53 Aligned_cols=27 Identities=4% Similarity=-0.119 Sum_probs=22.2
Q ss_pred HhhcCcchhhhhhccccchhhHHHHHH
Q 036324 57 ILAHHVKSRTIHSRFLRSRETISRYFN 83 (91)
Q Consensus 57 i~~~~~~~r~i~~~F~~S~eTisr~f~ 83 (91)
.-..|.+..+++..-+.|..||+++-+
T Consensus 10 R~~~gltq~~la~~~gis~~~i~~~E~ 36 (68)
T d1b0na2 10 RKEKGYSLSELAEKAGVAKSYLSSIER 36 (68)
T ss_dssp HHHTTCCHHHHHHHHTCCHHHHHHHHT
T ss_pred HHHcCCCHHHHHHHHCCCHHHHHHHHc
Confidence 345788889999999999999998764
No 133
>d1ujsa_ a.14.1.1 (A:) Actin-binding LIM protein homologue KIAA0843 {Human (Homo sapiens) [TaxId: 9606]}
Probab=45.73 E-value=3 Score=24.44 Aligned_cols=29 Identities=24% Similarity=0.230 Sum_probs=23.2
Q ss_pred ChhHHHHHhCCCHHHHHHHHHH----HHhCCCC
Q 036324 11 SDIECVNQLRMDKRTFELLCGL----LRINGGL 39 (91)
Q Consensus 11 ~~~~c~~~fRM~~~~F~~L~~~----L~~~~~l 39 (91)
++.++...|+|+++.|.+|-.| |+.+.+|
T Consensus 49 SdedF~~vFgMsr~eF~~LP~WKq~~lKK~~gL 81 (88)
T d1ujsa_ 49 SQEEFYQVFGMTISEFDRLALWKRNELKKQARL 81 (88)
T ss_dssp CTTHHHHHHSSCHHHHTTSCHHHHHHHHHHTTC
T ss_pred CHHHHHHHHCcCHHHHHHCcHHHHHHHHHHhCC
Confidence 6789999999999999999776 4444444
No 134
>d2b5aa1 a.35.1.3 (A:1-77) Regulatory protein C.BclI {Bacillus caldolyticus [TaxId: 1394]}
Probab=45.45 E-value=6.8 Score=20.91 Aligned_cols=26 Identities=15% Similarity=-0.029 Sum_probs=21.3
Q ss_pred hhcCcchhhhhhccccchhhHHHHHH
Q 036324 58 LAHHVKSRTIHSRFLRSRETISRYFN 83 (91)
Q Consensus 58 ~~~~~~~r~i~~~F~~S~eTisr~f~ 83 (91)
-.+|.+..+++..-|.|..||+++-+
T Consensus 20 ~~~gltq~~lA~~~gis~~~i~~~e~ 45 (77)
T d2b5aa1 20 TQKGVSQEELADLAGLHRTYISEVER 45 (77)
T ss_dssp HHTTCCHHHHHHHHTCCHHHHHHHHT
T ss_pred HHcCCCHHHHHHHHCCCHHHHHHHHc
Confidence 45678888899999999999988754
No 135
>d2oa4a1 a.4.12.3 (A:1-93) Uncharacterized protein SPO1678 {Silicibacter pomeroyi [TaxId: 89184]}
Probab=45.26 E-value=25 Score=20.39 Aligned_cols=49 Identities=4% Similarity=0.057 Sum_probs=44.4
Q ss_pred CCCCCccHHHHHHHHHHHhhcCcchhhhhhccccchhhHHHHHHHHHHH
Q 036324 40 KADGTVSIEEQLCMFLHILAHHVKSRTIHSRFLRSRETISRYFNLVLNA 88 (91)
Q Consensus 40 ~~s~~v~veE~vamFL~i~~~~~~~r~i~~~F~~S~eTisr~f~~Vl~a 88 (91)
++|+.=+.+++.++-+-+++.-.+...+..+++-|.|-+.+.-.++++.
T Consensus 29 ~~trRWva~RKaaVV~av~~Gl~S~~EAcrrY~LS~eEf~~W~~a~~~h 77 (93)
T d2oa4a1 29 ANTRRWVASRKIAVVRGVIYGLITLAEAKQTYGLSDEEFNSWVSALAEH 77 (93)
T ss_dssp SCCSCCCHHHHHHHHHHHHHTTCCHHHHHHTTCSSHHHHHHHHHHHHCC
T ss_pred cccccccHHHHHHHHHHHHcCcCCHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 4567889999999999999999999999999999999999998887653
No 136
>d1x57a1 a.35.1.12 (A:8-85) Endothelial differentiation-related factor 1, EDF1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=45.16 E-value=6.9 Score=21.30 Aligned_cols=27 Identities=7% Similarity=0.174 Sum_probs=23.3
Q ss_pred HHhhcCcchhhhhhccccchhhHHHHH
Q 036324 56 HILAHHVKSRTIHSRFLRSRETISRYF 82 (91)
Q Consensus 56 ~i~~~~~~~r~i~~~F~~S~eTisr~f 82 (91)
+.-..|.+..+++...+.|..|||++=
T Consensus 14 ~R~~~gltq~~lA~~~gis~~~is~~E 40 (78)
T d1x57a1 14 GRQSKGLTQKDLATKINEKPQVIADYE 40 (78)
T ss_dssp HHHTTTCCHHHHHHHHTSCHHHHHHHH
T ss_pred HHHHcCCChhHHHHcCCCCHHHHHHHH
Confidence 456778999999999999999999873
No 137
>d1b9ma1 a.4.5.8 (A:-1-126) N-terminal domain of molybdate-dependent transcriptional regulator ModE {Escherichia coli [TaxId: 562]}
Probab=44.91 E-value=6.9 Score=22.87 Aligned_cols=36 Identities=14% Similarity=-0.015 Sum_probs=28.6
Q ss_pred HHHHHHHHHhhcCcchhhhhhccccchhhHHHHHHHH
Q 036324 49 EQLCMFLHILAHHVKSRTIHSRFLRSRETISRYFNLV 85 (91)
Q Consensus 49 E~vamFL~i~~~~~~~r~i~~~F~~S~eTisr~f~~V 85 (91)
.++.+|.-+ +...+...++...+.|.+|||+.++..
T Consensus 21 ~~l~~~~ai-~~~gs~~~AA~~l~~sq~avs~~i~~l 56 (127)
T d1b9ma1 21 RRISLLKHI-ALSGSISQGAKDAGISYKSAWDAINEM 56 (127)
T ss_dssp HHHHHHHHH-HHHSSHHHHHHHHTCCHHHHHHHHHHH
T ss_pred HHHHHHHHH-HHhCChHHHHHHhcCChhHHHHHHHHH
Confidence 356666544 556789999999999999999998764
No 138
>d2cfxa1 a.4.5.32 (A:1-63) Transcriptional regulator LrpC {Bacillus subtilis [TaxId: 1423]}
Probab=44.61 E-value=8.1 Score=20.32 Aligned_cols=25 Identities=8% Similarity=0.122 Sum_probs=21.9
Q ss_pred cchhhhhhccccchhhHHHHHHHHH
Q 036324 62 VKSRTIHSRFLRSRETISRYFNLVL 86 (91)
Q Consensus 62 ~~~r~i~~~F~~S~eTisr~f~~Vl 86 (91)
.+++.++..-+.|.+||++.+...-
T Consensus 20 ~s~~~iA~~lgis~~tv~~Ri~~L~ 44 (63)
T d2cfxa1 20 LSMRELGRKIKLSPPSVTERVRQLE 44 (63)
T ss_dssp CCHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHCcCHHHHHHHHHHHH
Confidence 6889999999999999999988654
No 139
>d2ofya1 a.35.1.3 (A:3-84) Putative transcriptional regulator RHA1_ro04071 {Rhodococcus sp. RHA1 [TaxId: 101510]}
Probab=44.25 E-value=13 Score=20.59 Aligned_cols=33 Identities=18% Similarity=0.073 Sum_probs=26.5
Q ss_pred HHHHHHHHHhhcCcchhhhhhccccchhhHHHH
Q 036324 49 EQLCMFLHILAHHVKSRTIHSRFLRSRETISRY 81 (91)
Q Consensus 49 E~vamFL~i~~~~~~~r~i~~~F~~S~eTisr~ 81 (91)
++++--|-..-.+.+..+++..=|.|..|||++
T Consensus 13 ~~lG~~ir~~R~~~t~~eLA~~~Gvs~~~ls~i 45 (82)
T d2ofya1 13 QRLGELLRSARGDMSMVTVAFDAGISVETLRKI 45 (82)
T ss_dssp HHHHHHHHHHHTTSCHHHHHHHHTCCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHcCCHHHHHHH
Confidence 567777666767778888899999999999886
No 140
>d1hsja1 a.4.5.28 (A:373-487) Staphylococcal accessory regulator A homolog, SarR {Staphylococcus aureus [TaxId: 1280]}
Probab=42.84 E-value=26 Score=19.93 Aligned_cols=42 Identities=10% Similarity=0.086 Sum_probs=30.7
Q ss_pred CccHHHHHHH-HHHHh-hcCcchhhhhhccccchhhHHHHHHHH
Q 036324 44 TVSIEEQLCM-FLHIL-AHHVKSRTIHSRFLRSRETISRYFNLV 85 (91)
Q Consensus 44 ~v~veE~vam-FL~i~-~~~~~~r~i~~~F~~S~eTisr~f~~V 85 (91)
++|..|-..+ +|+.. ..+.+...|+..++.+++||++.+...
T Consensus 29 ~Lt~~q~~vL~~l~~~~~~~~t~~ela~~l~~~~~~vs~~i~~L 72 (115)
T d1hsja1 29 NLNYEEIYILNHILRSESNEISSKEIAKCSEFKPYYLTKALQKL 72 (115)
T ss_dssp CCCHHHHHHHHHHHTCSCSEEEHHHHHHSSCCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHccCCCCcCHHHHHHHHCCChhhHHHHHHHH
Confidence 5777774433 33322 335889999999999999999988764
No 141
>d2r1jl1 a.35.1.2 (L:3-68) P22 C2 repressor, DNA-binding domain {Salmonella bacteriophage P22 [TaxId: 10754]}
Probab=42.58 E-value=5.4 Score=20.74 Aligned_cols=26 Identities=12% Similarity=0.068 Sum_probs=21.9
Q ss_pred hhcCcchhhhhhccccchhhHHHHHH
Q 036324 58 LAHHVKSRTIHSRFLRSRETISRYFN 83 (91)
Q Consensus 58 ~~~~~~~r~i~~~F~~S~eTisr~f~ 83 (91)
-.+|.+..+++..-+.|.+||+++-+
T Consensus 13 ~~~g~tq~~lA~~~gvs~~~i~~~e~ 38 (66)
T d2r1jl1 13 KKLKIRQAALGKMVGVSNVAISQWER 38 (66)
T ss_dssp HHHTCCHHHHHHHHTSCHHHHHHHHT
T ss_pred HHcCCCHHHHHHHHCCCHHHHHHHHc
Confidence 45678999999999999999998743
No 142
>d2hoea1 a.4.5.63 (A:10-71) N-acetylglucosamine kinase {Thermotoga maritima [TaxId: 2336]}
Probab=41.60 E-value=13 Score=19.48 Aligned_cols=29 Identities=10% Similarity=0.158 Sum_probs=25.0
Q ss_pred cCcchhhhhhccccchhhHHHHHHHHHHH
Q 036324 60 HHVKSRTIHSRFLRSRETISRYFNLVLNA 88 (91)
Q Consensus 60 ~~~~~r~i~~~F~~S~eTisr~f~~Vl~a 88 (91)
++.+-.+++..-+-|..||+++..+.+++
T Consensus 11 ~pisr~eLa~~~gls~~TVs~~v~~L~~~ 39 (62)
T d2hoea1 11 SPVSRVELAEELGLTKTTVGEIAKIFLEK 39 (62)
T ss_dssp SCBCHHHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHCcCHHHHHHHHHHHHHC
Confidence 35778889999999999999999988764
No 143
>d1y9qa1 a.35.1.8 (A:4-82) Probable transcriptional regulator VC1968, N-terminal domain {Vibrio cholerae [TaxId: 666]}
Probab=41.24 E-value=6.2 Score=21.19 Aligned_cols=26 Identities=4% Similarity=-0.113 Sum_probs=21.9
Q ss_pred hhcCcchhhhhhccccchhhHHHHHH
Q 036324 58 LAHHVKSRTIHSRFLRSRETISRYFN 83 (91)
Q Consensus 58 ~~~~~~~r~i~~~F~~S~eTisr~f~ 83 (91)
-..|.+..+++..-|.|..+|+++.+
T Consensus 18 ~~~g~sq~~lA~~~gis~~~i~~~E~ 43 (79)
T d1y9qa1 18 KSRGLSLDATAQLTGVSKAMLGQIER 43 (79)
T ss_dssp HHTTCCHHHHHHHHSSCHHHHHHHHT
T ss_pred HHcCCCHHHHHHHHCcchhHHHHHHc
Confidence 45678889999999999999998865
No 144
>d2ezla_ a.4.1.2 (A:) Ibeta subdomain of the mu end DNA-binding domain of phage mu transposase {Bacteriophage mu [TaxId: 10677]}
Probab=40.63 E-value=8.8 Score=22.65 Aligned_cols=23 Identities=17% Similarity=0.198 Sum_probs=19.6
Q ss_pred chhhhhhccccchhhHHHHHHHH
Q 036324 63 KSRTIHSRFLRSRETISRYFNLV 85 (91)
Q Consensus 63 ~~r~i~~~F~~S~eTisr~f~~V 85 (91)
-+..+...|+.|..|+.+++..|
T Consensus 55 A~~~VA~~~~vs~~TL~nW~~~V 77 (99)
T d2ezla_ 55 AFATVAGHYQVSASTLRDKYYQV 77 (99)
T ss_dssp HHHHHHHHSSSCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHH
Confidence 35667889999999999999877
No 145
>d3ctaa1 a.4.5.28 (A:5-89) Ta1064 (RFK), N-terminal domain {Thermoplasma acidophilum [TaxId: 2303]}
Probab=38.74 E-value=8.6 Score=21.36 Aligned_cols=26 Identities=15% Similarity=0.045 Sum_probs=22.6
Q ss_pred CcchhhhhhccccchhhHHHHHHHHH
Q 036324 61 HVKSRTIHSRFLRSRETISRYFNLVL 86 (91)
Q Consensus 61 ~~~~r~i~~~F~~S~eTisr~f~~Vl 86 (91)
+.+..+++...+.|++||++..+..-
T Consensus 21 ~lt~~eLa~~l~i~~~~vs~~l~~Le 46 (85)
T d3ctaa1 21 YLTSSKLADMLGISQQSASRIIIDLE 46 (85)
T ss_dssp ECCHHHHHHHHTSCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHCCCHHHHHHHHHHHH
Confidence 36789999999999999999988654
No 146
>d2a6ca1 a.35.1.13 (A:1-69) HTH-motif protein NE1354 {Nitrosomonas europaea [TaxId: 915]}
Probab=38.27 E-value=9.6 Score=20.06 Aligned_cols=27 Identities=4% Similarity=-0.011 Sum_probs=21.3
Q ss_pred HhhcCcchhhhhhccccchhhHHHHHH
Q 036324 57 ILAHHVKSRTIHSRFLRSRETISRYFN 83 (91)
Q Consensus 57 i~~~~~~~r~i~~~F~~S~eTisr~f~ 83 (91)
+-..|.+..+++..-|.|.++||++.+
T Consensus 15 r~~~gltq~elA~~~gv~~~~is~ie~ 41 (69)
T d2a6ca1 15 LRNSGLTQFKAAELLGVTQPRVSDLMR 41 (69)
T ss_dssp HHTTTCCHHHHHHHHTSCHHHHHHHHT
T ss_pred HHHcCCCHHHHHHHHHcCHhHHHHHHc
Confidence 445678888888888888888888764
No 147
>d1rr7a_ a.4.1.14 (A:) Middle operon regulator, Mor {Bacteriophage Mu [TaxId: 10677]}
Probab=38.14 E-value=11 Score=21.71 Aligned_cols=26 Identities=8% Similarity=0.115 Sum_probs=23.1
Q ss_pred cCcchhhhhhccccchhhHHHHHHHH
Q 036324 60 HHVKSRTIHSRFLRSRETISRYFNLV 85 (91)
Q Consensus 60 ~~~~~r~i~~~F~~S~eTisr~f~~V 85 (91)
.|.+.+.++..|+-|-.+|.++++++
T Consensus 65 ~G~n~~eLA~kY~lS~~~I~~Ii~~~ 90 (94)
T d1rr7a_ 65 NGRNVSELTTRYGVTFNTVYKAIRRM 90 (94)
T ss_dssp CSSCHHHHHHHHTCCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHCCCHHHHHHHHHHH
Confidence 46778999999999999999999876
No 148
>d1j9ia_ a.6.1.5 (A:) Terminase gpNU1 subunit domain {Bacteriophage lambda [TaxId: 10710]}
Probab=37.88 E-value=7.5 Score=21.56 Aligned_cols=20 Identities=20% Similarity=0.242 Sum_probs=16.5
Q ss_pred chhhhhhccccchhhHHHHH
Q 036324 63 KSRTIHSRFLRSRETISRYF 82 (91)
Q Consensus 63 ~~r~i~~~F~~S~eTisr~f 82 (91)
.-.++++.||+|..||....
T Consensus 4 nk~~lA~iFGVS~~TI~~W~ 23 (68)
T d1j9ia_ 4 NKKQLADIFGASIRTIQNWQ 23 (68)
T ss_dssp EHHHHHHHTTCCHHHHHHHT
T ss_pred CHHHHHHHhCCCHHHHHHHH
Confidence 34678999999999998764
No 149
>d1v4ra1 a.4.5.6 (A:1-100) Transcriptional repressor TraR, N-terminal domain {Streptomyces sp. [TaxId: 1931]}
Probab=35.62 E-value=7.1 Score=22.37 Aligned_cols=21 Identities=24% Similarity=0.319 Sum_probs=15.8
Q ss_pred chhhhhhccccchhhHHHHHH
Q 036324 63 KSRTIHSRFLRSRETISRYFN 83 (91)
Q Consensus 63 ~~r~i~~~F~~S~eTisr~f~ 83 (91)
+-|.++..|+.|..||.+.+.
T Consensus 35 s~r~La~~~~vSr~tvr~Al~ 55 (100)
T d1v4ra1 35 SVADIRAQFGVAAKTVSRALA 55 (100)
T ss_dssp CHHHHHHHSSSCTTHHHHHTT
T ss_pred cHHHHHHHHCCCHHHHHHHHH
Confidence 345567789999999987654
No 150
>d2g9wa1 a.4.5.39 (A:3-124) Hypothetical protein Rv1846c {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=35.61 E-value=22 Score=20.65 Aligned_cols=41 Identities=12% Similarity=0.128 Sum_probs=32.6
Q ss_pred cHHHHHHHHHHHhhcCcchhhhhhccc----cchhhHHHHHHHHH
Q 036324 46 SIEEQLCMFLHILAHHVKSRTIHSRFL----RSRETISRYFNLVL 86 (91)
Q Consensus 46 ~veE~vamFL~i~~~~~~~r~i~~~F~----~S~eTisr~f~~Vl 86 (91)
..|.+|--.||-.|.+.+.++|.+.+. .+..||....+...
T Consensus 7 ~~E~~IM~~lW~~g~~~t~~eI~~~l~~~~~~~~sTV~T~L~rL~ 51 (122)
T d2g9wa1 7 DLERAVMDHLWSRTEPQTVRQVHEALSARRDLAYTTVMAVLQRLA 51 (122)
T ss_dssp HHHHHHHHHHHTCSSCEEHHHHHHHHTTTCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCccHHHHHHHHhccCCCcHHHHHHHHHHHH
Confidence 478889999999998889999998885 45668887766543
No 151
>d1gv2a2 a.4.1.3 (A:144-190) c-Myb, DNA-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=34.09 E-value=26 Score=17.27 Aligned_cols=41 Identities=15% Similarity=0.112 Sum_probs=28.9
Q ss_pred cHHHHHHHHHHHhhcCcchhhhhhcc-ccchhhHHHHHHHHH
Q 036324 46 SIEEQLCMFLHILAHHVKSRTIHSRF-LRSRETISRYFNLVL 86 (91)
Q Consensus 46 ~veE~vamFL~i~~~~~~~r~i~~~F-~~S~eTisr~f~~Vl 86 (91)
|-||--.+.-.+--+|..-..|+..| +||...|...++..+
T Consensus 5 T~eED~~L~~~v~~~G~~W~~Ia~~~~gRt~~~~knr~~~~l 46 (47)
T d1gv2a2 5 TEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTM 46 (47)
T ss_dssp CHHHHHHHHHHHHHHSSCHHHHHTTCTTCCHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHhhHHHHHHhHcCCCCHHHHHHHHHHHc
Confidence 44555555555555667888999999 899998887777654
No 152
>d1zk8a2 a.121.1.1 (A:78-182) Transcriptional regulator BC5000 {Bacillus cereus [TaxId: 1396]}
Probab=32.71 E-value=36 Score=18.63 Aligned_cols=74 Identities=12% Similarity=0.088 Sum_probs=47.8
Q ss_pred ChhHHHHHhCCCHH-------HHHHHHHHHHhCCCCCCCCCccHHHHHHHHHHHhhcCcchhhhhhccccchhhHHHHHH
Q 036324 11 SDIECVNQLRMDKR-------TFELLCGLLRINGGLKADGTVSIEEQLCMFLHILAHHVKSRTIHSRFLRSRETISRYFN 83 (91)
Q Consensus 11 ~~~~c~~~fRM~~~-------~F~~L~~~L~~~~~l~~s~~v~veE~vamFL~i~~~~~~~r~i~~~F~~S~eTisr~f~ 83 (91)
||....-||.-.+. .+..+.+.+ ..+++.+ .. -+..|.-+|...||.-.=.+...|+.+.+ +-+.+.
T Consensus 21 ~P~~y~lmf~~~~~~~~~~~~~~~~l~~~~-~~~~~~~---~d-~~~~a~~lWa~vHG~~~L~~~g~~~~~~d-~~~~~~ 94 (105)
T d1zk8a2 21 HPGLYEATFLRDEEVRKAGDGIVKLCLQVL-QQYGLEG---EN-ALHATRGFRSICHGFASIEQQGGFGLPLD-LDISLH 94 (105)
T ss_dssp CHHHHHHTTCCCHHHHHHHHHHHHHHHHHH-GGGTCCH---HH-HHHHHHHHHHHHHHHHHHHHHTCCCSSSC-HHHHHH
T ss_pred ChHHHHHHhCCCcchHHHHHHHHHHHHHHH-HhhCCCC---cc-HHHHHHHHHHHHHhHHHHHhcCCCCCCCC-HHHHHH
Confidence 77777777755442 333333333 3344332 22 23578999999999888888999988765 567777
Q ss_pred HHHHHHh
Q 036324 84 LVLNAIL 90 (91)
Q Consensus 84 ~Vl~ai~ 90 (91)
..+++++
T Consensus 95 ~~~~~~l 101 (105)
T d1zk8a2 95 VLLETFI 101 (105)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7777664
No 153
>d2p5ka1 a.4.5.3 (A:2-64) Arginine repressor (ArgR), N-terminal DNA-binding domain {Bacillus subtilis [TaxId: 1423]}
Probab=32.50 E-value=12 Score=20.12 Aligned_cols=31 Identities=16% Similarity=0.254 Sum_probs=20.8
Q ss_pred CccHHHHHHHHHHHhhcCcchhhhhhccccchhhHHHHHHHH
Q 036324 44 TVSIEEQLCMFLHILAHHVKSRTIHSRFLRSRETISRYFNLV 85 (91)
Q Consensus 44 ~v~veE~vamFL~i~~~~~~~r~i~~~F~~S~eTisr~f~~V 85 (91)
.|+..|.+.=.|--- -|..++.||||-+++.
T Consensus 17 ~i~tQ~eL~~~L~~~-----------G~~vTQaTlSRDL~eL 47 (63)
T d2p5ka1 17 EIETQDELVDMLKQD-----------GYKVTQATVSRDIKEL 47 (63)
T ss_dssp CCCSHHHHHHHHHHT-----------TCCCCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHc-----------CCCeeHHHHHHHHHHh
Confidence 466666665555333 3667889999988774
No 154
>d2o3fa1 a.4.1.20 (A:1-83) Putative transcriptional regulator YbbH {Bacillus subtilis [TaxId: 1423]}
Probab=31.66 E-value=14 Score=20.53 Aligned_cols=37 Identities=24% Similarity=0.266 Sum_probs=28.2
Q ss_pred cHHHHHHHHHHHhhc-----CcchhhhhhccccchhhHHHHHHH
Q 036324 46 SIEEQLCMFLHILAH-----HVKSRTIHSRFLRSRETISRYFNL 84 (91)
Q Consensus 46 ~veE~vamFL~i~~~-----~~~~r~i~~~F~~S~eTisr~f~~ 84 (91)
+.|.+||=| ++.| ..+-++++..-+.|.+||.|-.+.
T Consensus 18 ~~e~~ia~y--il~~~~~~~~~si~~lA~~~~vS~sTi~Rf~kk 59 (83)
T d2o3fa1 18 PSERKLADY--ILAHPHKAIESTVNEISALANSSDAAVIRLCKS 59 (83)
T ss_dssp HHHHHHHHH--HHHCHHHHHTCCHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHHHHHH--HHcCHHHHHHccHHHHHHHHCCCHHHHHHHHHH
Confidence 456666654 4444 478999999999999999997654
No 155
>d1p4xa1 a.4.5.28 (A:1-125) Staphylococcal accessory regulator A homolog, SarS {Staphylococcus aureus [TaxId: 1280]}
Probab=30.59 E-value=45 Score=19.05 Aligned_cols=43 Identities=12% Similarity=0.196 Sum_probs=29.9
Q ss_pred CccHHHHHHHH-HHHhhc-CcchhhhhhccccchhhHHHHHHHHH
Q 036324 44 TVSIEEQLCMF-LHILAH-HVKSRTIHSRFLRSRETISRYFNLVL 86 (91)
Q Consensus 44 ~v~veE~vamF-L~i~~~-~~~~r~i~~~F~~S~eTisr~f~~Vl 86 (91)
++|..|-..+. |+.... +.+...|+...+.+++||++..+..-
T Consensus 31 ~Lt~~q~~iL~~l~~~~~~~~t~~eia~~~~~~~~~vs~~l~~L~ 75 (125)
T d1p4xa1 31 DMTIKEFILLTYLFHQQENTLPFKKIVSDLCYKQSDLVQHIKVLV 75 (125)
T ss_dssp SSCHHHHHHHHHHHSCSCSEEEHHHHHHHSSSCGGGTHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhccCCcCHHHHHHHhCCCcchHHHHHHHHH
Confidence 46666654442 222211 35889999999999999999987654
No 156
>d1zq1a2 c.88.1.1 (A:76-438) Glutamyl-tRNA(Gln) amidotransferase subunit D, GatD {Pyrococcus abyssi [TaxId: 29292]}
Probab=30.58 E-value=14 Score=25.88 Aligned_cols=42 Identities=14% Similarity=0.182 Sum_probs=34.6
Q ss_pred HHHhCCCCCCCCCccHHHHHHHHHHHhhcCcchhhhhhccccc
Q 036324 32 LLRINGGLKADGTVSIEEQLCMFLHILAHHVKSRTIHSRFLRS 74 (91)
Q Consensus 32 ~L~~~~~l~~s~~v~veE~vamFL~i~~~~~~~r~i~~~F~~S 74 (91)
.|.. .|.-+...++.|.+...-+|.++++.+...|++.|..+
T Consensus 306 ~l~~-~GvI~~gdlt~ekArikLm~lL~~~~~~~eI~~~f~~n 347 (363)
T d1zq1a2 306 KLLK-AGVIPCEDMLPETAYVKLMWVLGHTQNLEEVRKMMLTN 347 (363)
T ss_dssp HHHH-TTCEECTTCCHHHHHHHHHHHHTTCCCHHHHHHHHHSC
T ss_pred HHHh-CCEEECCCCCHHHHHHHHHHHHcCCCCHHHHHHHHccc
Confidence 4444 33555678999999999999999999999999999774
No 157
>d1okra_ a.4.5.39 (A:) Methicillin resistance regulatory protein MecI {Staphylococcus aureus [TaxId: 1280]}
Probab=28.50 E-value=42 Score=18.97 Aligned_cols=39 Identities=15% Similarity=0.101 Sum_probs=30.7
Q ss_pred cHHHHHHHHHHHhhcCcchhhhhhcc----ccchhhHHHHHHHH
Q 036324 46 SIEEQLCMFLHILAHHVKSRTIHSRF----LRSRETISRYFNLV 85 (91)
Q Consensus 46 ~veE~vamFL~i~~~~~~~r~i~~~F----~~S~eTisr~f~~V 85 (91)
..|..|-..||-.+ +.+.+.|.+.. +.+..||....+..
T Consensus 7 ~~E~~VM~~lW~~~-~~t~~ei~~~l~~~~~~~~sTv~t~L~rL 49 (120)
T d1okra_ 7 SAEWEVMNIIWMKK-YASANNIIEEIQMQKDWSPKTIRTLITRL 49 (120)
T ss_dssp HHHHHHHHHHHHHS-SEEHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCC-CCCHHHHHHHHhcccCccHHhHHHHHHHH
Confidence 46888999999987 68888877765 67888998876654
No 158
>d1g2ha_ a.4.1.12 (A:) Transcriptional regulator TyrR, C-terminal domain {Haemophilus influenzae [TaxId: 727]}
Probab=28.35 E-value=24 Score=18.28 Aligned_cols=23 Identities=17% Similarity=0.218 Sum_probs=19.6
Q ss_pred cchhhhhhccccchhhHHHHHHH
Q 036324 62 VKSRTIHSRFLRSRETISRYFNL 84 (91)
Q Consensus 62 ~~~r~i~~~F~~S~eTisr~f~~ 84 (91)
...+.++...|.|+.|++|+.++
T Consensus 34 gn~~~aA~~Lgisr~tL~rKlkk 56 (61)
T d1g2ha_ 34 PSTRKLAQRLGVSHTAIANKLKQ 56 (61)
T ss_dssp CSHHHHHHHTTSCTHHHHHHHHT
T ss_pred CCHHHHHHHHCCCHHHHHHHHHH
Confidence 35678999999999999998764
No 159
>d1wsaa_ c.88.1.1 (A:) Asparaginase type II {Wolinella succinogenes [TaxId: 844]}
Probab=28.19 E-value=20 Score=24.57 Aligned_cols=33 Identities=12% Similarity=0.218 Sum_probs=28.8
Q ss_pred CCCCccHHHHHHHHHHHhhcCcchhhhhhcccc
Q 036324 41 ADGTVSIEEQLCMFLHILAHHVKSRTIHSRFLR 73 (91)
Q Consensus 41 ~s~~v~veE~vamFL~i~~~~~~~r~i~~~F~~ 73 (91)
+...++.|...+.-+|.++++.+...|++.|++
T Consensus 295 ~~gdlt~ekA~vkL~~~L~~~~d~~~i~~~f~t 327 (328)
T d1wsaa_ 295 ATESLNPQKARVLLMLALTKTSDREAIQKIFST 327 (328)
T ss_dssp ECBSCCHHHHHHHHHHHHTTCCCHHHHHHHHTT
T ss_pred ECCCCCHHHHHHHHHHHHcCCCCHHHHHHHHHh
Confidence 345799999999999999999999999998863
No 160
>d1pd0a4 d.109.2.1 (A:754-926) Sec24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=27.75 E-value=5.5 Score=25.01 Aligned_cols=37 Identities=11% Similarity=0.219 Sum_probs=28.4
Q ss_pred HHHHHHhhcCcchhhhhhccccch----------------hhHHHHHHHHHHHH
Q 036324 52 CMFLHILAHHVKSRTIHSRFLRSR----------------ETISRYFNLVLNAI 89 (91)
Q Consensus 52 amFL~i~~~~~~~r~i~~~F~~S~----------------eTisr~f~~Vl~ai 89 (91)
.+|||+ |.+++...+++.||.+. ..+|+.+++++.++
T Consensus 54 ~~~Lwv-G~~v~p~ll~dlFGv~s~~~l~~~~~~lp~~~~~~~s~rv~~ii~~l 106 (173)
T d1pd0a4 54 ELFLWM-GGDAVPALVFDVFGTQDIFDIPIGKQEIPVVENSEFNQRVRNIINQL 106 (173)
T ss_dssp CEEEEE-CTTCCHHHHHHHHSCSCGGGSCCEECCCCCCTTCHHHHHHHHHHHHH
T ss_pred EEEEEE-CCCCCHHHHHHHcCCCCHHHcCcccccCcccCCcHHHHHHHHHHHHH
Confidence 367776 88899999999998641 13788898888775
No 161
>d1ztda1 a.149.1.2 (A:2-125) Hypothetical protein PF0609 {Pyrococcus furiosus [TaxId: 2261]}
Probab=26.16 E-value=39 Score=20.24 Aligned_cols=41 Identities=20% Similarity=0.320 Sum_probs=32.8
Q ss_pred CccHHHHHHHHHHHhhcCcchhhhhhccccchhhHHHHHHHHHHHHh
Q 036324 44 TVSIEEQLCMFLHILAHHVKSRTIHSRFLRSRETISRYFNLVLNAIL 90 (91)
Q Consensus 44 ~v~veE~vamFL~i~~~~~~~r~i~~~F~~S~eTisr~f~~Vl~ai~ 90 (91)
.+++||+|-| +-.|.+..++ .|.+-.|+|-+.|-++++.|-
T Consensus 76 ~it~eEavEi----lk~nl~~dvl--~f~rkkeaig~a~a~ll~~i~ 116 (124)
T d1ztda1 76 LISEREAVEI----IKKNLYPEVL--DFSKKKEAIGRALAPLLVIIS 116 (124)
T ss_dssp SSCHHHHHHH----HHTTCCGGGG--CTTTHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHH----HHHhCcHHHh--hhhHHHHHHHHHHHHHHHHHH
Confidence 5889999876 5667666554 578999999999999998774
No 162
>d1umqa_ a.4.1.12 (A:) Photosynthetic apparatus regulatory protein PprA (RegA), DNA-binding domain {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=25.69 E-value=18 Score=18.75 Aligned_cols=25 Identities=16% Similarity=0.149 Sum_probs=20.0
Q ss_pred cCcchhhhhhccccchhhHHHHHHH
Q 036324 60 HHVKSRTIHSRFLRSRETISRYFNL 84 (91)
Q Consensus 60 ~~~~~r~i~~~F~~S~eTisr~f~~ 84 (91)
++.....++..-|.|+.|++|+.++
T Consensus 32 ~~gn~~~aA~~LGIsR~TL~rkmkk 56 (60)
T d1umqa_ 32 CDRNVSETARRLNMHRRTLQRILAK 56 (60)
T ss_dssp TTSCHHHHHHHHTSCHHHHHHHHHT
T ss_pred hcCcHHHHHHHHCCCHHHHHHHHHH
Confidence 3344568999999999999998764
No 163
>d2cu7a1 a.4.1.3 (A:8-72) MYSM1 (KIAA1915) {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.65 E-value=42 Score=17.06 Aligned_cols=43 Identities=14% Similarity=0.097 Sum_probs=28.2
Q ss_pred cHHHHHHHHHHHhhcCcchhhhhhcc-ccchhhHHHHHHHHHHH
Q 036324 46 SIEEQLCMFLHILAHHVKSRTIHSRF-LRSRETISRYFNLVLNA 88 (91)
Q Consensus 46 ~veE~vamFL~i~~~~~~~r~i~~~F-~~S~eTisr~f~~Vl~a 88 (91)
|.||...+.-.+--+|.....|+..| +||...|-.+....+..
T Consensus 6 T~eEd~~l~~~~~~~G~~W~~Ia~~~~~Rt~~q~k~ry~~~~~~ 49 (65)
T d2cu7a1 6 TIEEKELFEQGLAKFGRRWTKISKLIGSRTVLQVKSYARQYFKN 49 (65)
T ss_dssp CHHHHHHHHHHHHHTCSCHHHHHHHHSSSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhcchHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence 34454444444555667888999998 68888877666666543
No 164
>d1nnsa_ c.88.1.1 (A:) Asparaginase type II {Escherichia coli [TaxId: 562]}
Probab=25.64 E-value=22 Score=24.34 Aligned_cols=32 Identities=16% Similarity=0.266 Sum_probs=28.2
Q ss_pred CCCccHHHHHHHHHHHhhcCcchhhhhhcccc
Q 036324 42 DGTVSIEEQLCMFLHILAHHVKSRTIHSRFLR 73 (91)
Q Consensus 42 s~~v~veE~vamFL~i~~~~~~~r~i~~~F~~ 73 (91)
...++.|.....-+|.++++.+...|++.|.+
T Consensus 294 ~gdmt~ekA~ikL~~~L~~~~~~~~i~~~f~~ 325 (326)
T d1nnsa_ 294 SGTLNPQKARVLLQLALTQTKDPQQIQQIFNQ 325 (326)
T ss_dssp CBTCCHHHHHHHHHHHTTTCCCHHHHHHHHTT
T ss_pred CCCCCHHHHHHHHHHHHhCCCCHHHHHHHHHh
Confidence 34699999999999999999999999998864
No 165
>d1fx0a1 a.69.1.1 (A:373-501) F1 ATP synthase alpha subunit, domain 3 {Spinach (Spinacia oleracea), chloroplast [TaxId: 3562]}
Probab=25.54 E-value=31 Score=20.50 Aligned_cols=19 Identities=16% Similarity=0.242 Sum_probs=14.7
Q ss_pred CCCccHHHHHHHHHHHhhcC
Q 036324 42 DGTVSIEEQLCMFLHILAHH 61 (91)
Q Consensus 42 s~~v~veE~vamFL~i~~~~ 61 (91)
-.+++++|||++ ||....|
T Consensus 54 ~~Pl~v~eQv~i-LyA~~~G 72 (129)
T d1fx0a1 54 SAPLTVEEQVMT-IYTGTNG 72 (129)
T ss_dssp TCCCCHHHHHHH-HHHHHTT
T ss_pred ccCCCHHHHHHH-HHHHHcC
Confidence 457999999987 6776666
No 166
>d1e0ga_ d.7.1.1 (A:) Membrane-bound lytic murein transclycosylase D, MltD {Escherichia coli [TaxId: 562]}
Probab=24.62 E-value=8.8 Score=19.36 Aligned_cols=25 Identities=12% Similarity=-0.000 Sum_probs=19.7
Q ss_pred HHhhcCcchhhhhhccccchhhHHH
Q 036324 56 HILAHHVKSRTIHSRFLRSRETISR 80 (91)
Q Consensus 56 ~i~~~~~~~r~i~~~F~~S~eTisr 80 (91)
|.+..|.+--.|+.+|+.|.+.|-+
T Consensus 5 y~V~~GDTl~~IA~~y~vs~~~i~~ 29 (48)
T d1e0ga_ 5 YRVRKGDSLSSIAKRHGVNIKDVMR 29 (48)
T ss_dssp EEECTTCCHHHHHHHHTCCHHHHHH
T ss_pred EEECCCCCHHHHHHHHCCCHHHHHH
Confidence 5667788888899999998877643
No 167
>d1b4aa1 a.4.5.3 (A:4-78) Arginine repressor (ArgR), N-terminal DNA-binding domain {Bacillus stearothermophilus [TaxId: 1422]}
Probab=24.23 E-value=18 Score=19.98 Aligned_cols=31 Identities=19% Similarity=0.250 Sum_probs=20.8
Q ss_pred CccHHHHHHHHHHHhhcCcchhhhhhccccchhhHHHHHHHH
Q 036324 44 TVSIEEQLCMFLHILAHHVKSRTIHSRFLRSRETISRYFNLV 85 (91)
Q Consensus 44 ~v~veE~vamFL~i~~~~~~~r~i~~~F~~S~eTisr~f~~V 85 (91)
.|+..|.|+=-|-.-| |..+..||||-+++.
T Consensus 15 ~i~tQ~eL~~~L~~~G-----------i~vTQaTlSRDL~eL 45 (75)
T d1b4aa1 15 DIETQDELVDRLREAG-----------FNVTQATVSRDIKEM 45 (75)
T ss_dssp CCCSHHHHHHHHHHTT-----------CCCCHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHcC-----------CceeHHHHHHHHHHh
Confidence 4666666666554444 556788999988763
No 168
>d1xmka1 a.4.5.19 (A:294-366) Z-alpha domain of dsRNA-specific adenosine deaminase, ADAR1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.98 E-value=56 Score=17.91 Aligned_cols=39 Identities=18% Similarity=0.326 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHhhcCcchhhhhhccccchhhHHHHHHHHHHHH
Q 036324 47 IEEQLCMFLHILAHHVKSRTIHSRFLRSRETISRYFNLVLNAI 89 (91)
Q Consensus 47 veE~vamFL~i~~~~~~~r~i~~~F~~S~eTisr~f~~Vl~ai 89 (91)
.||+|.=||+-.| +.+-.+|+...|.+..+ -++.+|+++
T Consensus 6 ~eekI~~~L~~~g-~~~Al~iak~lGl~kak---eVN~~LY~L 44 (73)
T d1xmka1 6 IKEKICDYLFNVS-DSSALNLAKNIGLTKAR---DINAVLIDM 44 (73)
T ss_dssp HHHHHHHHHHHTC-CEEHHHHHHHHCGGGHH---HHHHHHHHH
T ss_pred HHHHHHHHHHHcC-CchHHHHHHHhCCCcHH---HHhHHHHHH
Confidence 5778888888777 57777788888777543 344455443
No 169
>d1aoya_ a.4.5.3 (A:) Arginine repressor (ArgR), N-terminal DNA-binding domain {Escherichia coli [TaxId: 562]}
Probab=23.57 E-value=21 Score=19.89 Aligned_cols=15 Identities=20% Similarity=0.304 Sum_probs=12.2
Q ss_pred cc-cchhhHHHHHHHH
Q 036324 71 FL-RSRETISRYFNLV 85 (91)
Q Consensus 71 F~-~S~eTisr~f~~V 85 (91)
|. .++.||||-+++.
T Consensus 38 ~~~vTQaTiSRDL~eL 53 (78)
T d1aoya_ 38 FDNINQSKVSRMLTKF 53 (78)
T ss_dssp CSSCCHHHHHHHHHHH
T ss_pred CcchhHHHHHHHHHHh
Confidence 54 6899999998874
No 170
>d2jdia1 a.69.1.1 (A:380-510) F1 ATP synthase alpha subunit, domain 3 {Cow (Bos taurus) [TaxId: 9913]}
Probab=23.41 E-value=42 Score=19.80 Aligned_cols=21 Identities=19% Similarity=0.186 Sum_probs=14.6
Q ss_pred CCCCCccHHHHHHHHHHHhhcC
Q 036324 40 KADGTVSIEEQLCMFLHILAHH 61 (91)
Q Consensus 40 ~~s~~v~veE~vamFL~i~~~~ 61 (91)
+.-.+++++|||++ ||....|
T Consensus 52 ~q~~Pl~v~eQv~i-L~A~~~G 72 (131)
T d2jdia1 52 GQYSPMAIEEQVAV-IYAGVRG 72 (131)
T ss_dssp CSSCCCCHHHHHHH-HHHHHTT
T ss_pred ccccchhHHHHHHH-HHHHhcC
Confidence 34468999999987 4555444
No 171
>d1o7ja_ c.88.1.1 (A:) Asparaginase type II {Erwinia chrysanthemi [TaxId: 556]}
Probab=22.14 E-value=22 Score=24.20 Aligned_cols=31 Identities=10% Similarity=0.219 Sum_probs=27.6
Q ss_pred CCCccHHHHHHHHHHHhhcCcchhhhhhccc
Q 036324 42 DGTVSIEEQLCMFLHILAHHVKSRTIHSRFL 72 (91)
Q Consensus 42 s~~v~veE~vamFL~i~~~~~~~r~i~~~F~ 72 (91)
...++.|.+...-+|.+|++.+...|++.|+
T Consensus 293 ~g~ltpekA~ikL~~~L~~~~~~~~i~~~f~ 323 (325)
T d1o7ja_ 293 SDSLNPAHARILLMLALTRTSDPKVIQEYFH 323 (325)
T ss_dssp CBTCCHHHHHHHHHHHTTTCCCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 4579999999999999999999998988885
No 172
>d1repc1 a.4.5.10 (C:15-143) RepE54 {Escherichia coli, mini-F plasmid [TaxId: 562]}
Probab=22.05 E-value=63 Score=18.50 Aligned_cols=29 Identities=10% Similarity=0.082 Sum_probs=22.8
Q ss_pred cchhhhhhccccchhhHHHHHHHHHHHHh
Q 036324 62 VKSRTIHSRFLRSRETISRYFNLVLNAIL 90 (91)
Q Consensus 62 ~~~r~i~~~F~~S~eTisr~f~~Vl~ai~ 90 (91)
.+..+.++.||.+..+.++.+.+.++.+.
T Consensus 48 i~~~e~~~~~g~~~~~~y~~l~~a~~~L~ 76 (129)
T d1repc1 48 IHVAKYAEIFGLTSAEASKDIRQALKSFA 76 (129)
T ss_dssp EEHHHHHHHTTCCHHHHHHHHHHHHHTTT
T ss_pred EEHHHHHHHHCCCchhHHHHHHHHHHHHh
Confidence 34456788899999999999988887654
No 173
>d1ntca_ a.4.1.12 (A:) DNA-binding domain of NTRC {Salmonella typhimurium [TaxId: 90371]}
Probab=21.81 E-value=60 Score=17.50 Aligned_cols=32 Identities=3% Similarity=-0.061 Sum_probs=24.7
Q ss_pred HHHHHhhcCcchhhhhhccccchhhHHHHHHH
Q 036324 53 MFLHILAHHVKSRTIHSRFLRSRETISRYFNL 84 (91)
Q Consensus 53 mFL~i~~~~~~~r~i~~~F~~S~eTisr~f~~ 84 (91)
|---.-.++.....++..-|.|+.|+.++.++
T Consensus 56 I~~aL~~~~Gn~~~AA~~LGI~R~TL~~Klk~ 87 (91)
T d1ntca_ 56 LTTALRHTQGHKQEAARLLGWGAATLTAKLKE 87 (91)
T ss_dssp HHHHHHHTTTCTTHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHHHHhCCcHHHHHHHHCCCHHHHHHHHHH
Confidence 33333446777788999999999999999875
No 174
>d2qaln1 g.39.1.7 (N:1-100) Ribosomal protein S14 {Escherichia coli [TaxId: 562]}
Probab=21.47 E-value=9.9 Score=22.21 Aligned_cols=25 Identities=4% Similarity=-0.011 Sum_probs=20.7
Q ss_pred hcCChhHHHHHhCCCHHHHHHHHHH
Q 036324 8 IIGSDIECVNQLRMDKRTFELLCGL 32 (91)
Q Consensus 8 l~~~~~~c~~~fRM~~~~F~~L~~~ 32 (91)
+-|.|.-.+..|++++.+|..|.+.
T Consensus 65 ~TGR~Rg~~r~f~lsRi~fR~la~~ 89 (100)
T d2qaln1 65 QTGRPHGFLRKFGLSRIKVREAAMR 89 (100)
T ss_dssp SSCCSSSCBTTTTBCHHHHHHHHHH
T ss_pred cCCCcceeeccccchHHHHHHHHHc
Confidence 4467777889999999999998764
No 175
>d1ku1a_ a.118.3.1 (A:) ARF guanine-exchange factor 2, Gea2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=21.22 E-value=98 Score=19.71 Aligned_cols=41 Identities=17% Similarity=0.234 Sum_probs=30.9
Q ss_pred HHHHhCCCCCCCCCccHHHHHHHHHHHhhcCcchhhhhhccccch
Q 036324 31 GLLRINGGLKADGTVSIEEQLCMFLHILAHHVKSRTIHSRFLRSR 75 (91)
Q Consensus 31 ~~L~~~~~l~~s~~v~veE~vamFL~i~~~~~~~r~i~~~F~~S~ 75 (91)
+.|.+++.+.+. .-+.+|=||+....+..-..|++.++...
T Consensus 31 ~~L~~~~~i~~~----~~~~iA~FL~~~~~~Ldk~~iGeyLg~~~ 71 (211)
T d1ku1a_ 31 PMLIEKGFIASD----SDKDIAEFLFNNNNRMNKKTIGLLLCHPD 71 (211)
T ss_dssp HHHHHTTSSSCS----SHHHHHHHHHHTTTTSCHHHHHHHHTCGG
T ss_pred HHHHHCCCcCCC----CHHHHHHHHHhcCCCCCHHHHHHHHCCCc
Confidence 456666666442 23679999998888899999999998654
No 176
>d2uubn1 g.39.1.7 (N:2-61) Ribosomal protein S14 {Thermus thermophilus [TaxId: 274]}
Probab=20.80 E-value=12 Score=20.12 Aligned_cols=25 Identities=8% Similarity=-0.024 Sum_probs=20.6
Q ss_pred hcCChhHHHHHhCCCHHHHHHHHHH
Q 036324 8 IIGSDIECVNQLRMDKRTFELLCGL 32 (91)
Q Consensus 8 l~~~~~~c~~~fRM~~~~F~~L~~~ 32 (91)
+-|.|.-.+..|++++..|.+|...
T Consensus 25 ~tGR~Rg~~r~F~lsR~~fR~la~~ 49 (60)
T d2uubn1 25 RCGRARSVYRFFGLCRICLRELAHK 49 (60)
T ss_dssp TTCCCSSBCTTTSCBHHHHHHHHHH
T ss_pred CCCCCceeecccccHHHHHHHHHHc
Confidence 4577777888999999999998763
No 177
>d1iufa1 a.4.1.7 (A:-2-75) Ars-binding protein 1, ABP1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=20.60 E-value=23 Score=19.95 Aligned_cols=40 Identities=10% Similarity=0.164 Sum_probs=32.0
Q ss_pred CCccHHHHHHHHHHHh--hcCcchhhhhhccc------cchhhHHHHH
Q 036324 43 GTVSIEEQLCMFLHIL--AHHVKSRTIHSRFL------RSRETISRYF 82 (91)
Q Consensus 43 ~~v~veE~vamFL~i~--~~~~~~r~i~~~F~------~S~eTisr~f 82 (91)
..|+.+++.|+==|.- .+..++.++..+|+ .|.+|||++.
T Consensus 10 ~aIs~~qK~ALR~~~~~~~~~~sqk~l~~WFe~~y~q~IsqssVS~iL 57 (78)
T d1iufa1 10 RAITEHEKRALRHYFFQLQNRSGQQDLIEWFREKFGKDISQPSVSQIL 57 (78)
T ss_dssp SCCCSHHHHHHHHHHHSSSSCCCHHHHHHHHHHHHSSCCSSSSTTHHH
T ss_pred ccCCHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHCCcchHHHHHHHh
Confidence 4799999999988864 44588888888886 5888998875
No 178
>d2ocda1 c.88.1.1 (A:2-337) Asparaginase type II {Vibrio cholerae [TaxId: 666]}
Probab=20.44 E-value=36 Score=23.14 Aligned_cols=34 Identities=9% Similarity=0.205 Sum_probs=30.6
Q ss_pred CCCCccHHHHHHHHHHHhhcCcchhhhhhccccc
Q 036324 41 ADGTVSIEEQLCMFLHILAHHVKSRTIHSRFLRS 74 (91)
Q Consensus 41 ~s~~v~veE~vamFL~i~~~~~~~r~i~~~F~~S 74 (91)
+...++.|.+...-+|.++++.+...|++.|.++
T Consensus 296 ~~~~lt~ekArvkL~~~L~~~~~~~~i~~~f~~~ 329 (336)
T d2ocda1 296 SGYDMTPEAALAKLHYLLSQNLSYEEVKAKMQQV 329 (336)
T ss_dssp ECTTCCHHHHHHHHHHHHHTCCCHHHHHHHHTSC
T ss_pred ECCCCCHHHHHHHHHHHHcCCCCHHHHHHHHhhh
Confidence 4567999999999999999999999999999875
No 179
>d1agxa_ c.88.1.1 (A:) Glutaminase-asparaginase {Acinetobacter glutaminasificans [TaxId: 474]}
Probab=20.09 E-value=32 Score=23.32 Aligned_cols=34 Identities=12% Similarity=0.160 Sum_probs=28.9
Q ss_pred CCCCCccHHHHHHHHHHHhhcCcchhhhhhcccc
Q 036324 40 KADGTVSIEEQLCMFLHILAHHVKSRTIHSRFLR 73 (91)
Q Consensus 40 ~~s~~v~veE~vamFL~i~~~~~~~r~i~~~F~~ 73 (91)
-+...++.|.+...-+|.++++.+...|++.|.+
T Consensus 297 I~~gdmtpe~A~ikL~~~L~~~~~~~~i~~~F~~ 330 (331)
T d1agxa_ 297 IAAHDLNPQKARLLMALALTKTNDAKEIQNMFWN 330 (331)
T ss_dssp EECBTCCHHHHHHHHHHHTTTCCCHHHHHHHHTT
T ss_pred EECCCCCHHHHHHHHHHHHhCCCCHHHHHHHHHh
Confidence 3345799999999999999999999999998853
Done!