Query 036326
Match_columns 225
No_of_seqs 127 out of 2362
Neff 10.6
Searched_HMMs 29240
Date Mon Mar 25 19:53:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036326.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036326hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1oy3_D Transcription factor in 100.0 1.8E-37 6.2E-42 239.9 20.5 195 22-224 6-266 (282)
2 3aji_A 26S proteasome non-ATPa 100.0 9.1E-37 3.1E-41 229.8 20.2 178 21-224 36-213 (231)
3 3b7b_A Euchromatic histone-lys 100.0 1.1E-36 3.9E-41 230.1 20.8 197 18-225 4-219 (237)
4 2dzn_A Probable 26S proteasome 100.0 1.5E-36 5.3E-41 228.0 21.3 182 21-225 32-217 (228)
5 4gpm_A Engineered protein OR26 100.0 1E-36 3.6E-41 219.0 19.4 156 27-205 6-161 (169)
6 1yyh_A HN1;, notch 1, ankyrin 100.0 4.5E-37 1.6E-41 234.8 18.0 178 22-225 54-232 (253)
7 4b93_B Ankyrin repeat domain-c 100.0 4E-37 1.4E-41 237.2 16.4 178 22-225 49-227 (269)
8 2f8y_A Notch homolog 1, transl 100.0 3E-36 1E-40 225.8 20.2 177 22-224 22-199 (223)
9 2xai_A ASB-9, ankyrin repeat a 100.0 3.8E-36 1.3E-40 230.8 21.1 177 21-225 32-208 (261)
10 1k1a_A B-cell lymphoma 3-encod 100.0 5.6E-36 1.9E-40 226.7 21.6 195 22-225 6-225 (241)
11 2rfa_A Transient receptor pote 100.0 2.1E-36 7E-41 228.1 18.8 184 24-225 2-206 (232)
12 1s70_B 130 kDa myosin-binding 100.0 6.2E-36 2.1E-40 233.5 20.0 178 22-225 37-274 (299)
13 2xai_A ASB-9, ankyrin repeat a 100.0 4.2E-36 1.4E-40 230.5 18.4 174 24-225 2-175 (261)
14 1ikn_D Protein (I-kappa-B-alph 100.0 4.3E-37 1.5E-41 232.5 12.2 179 23-224 6-192 (236)
15 3hra_A Ankyrin repeat family p 100.0 1.3E-35 4.4E-40 218.9 19.1 179 23-225 3-187 (201)
16 1yyh_A HN1;, notch 1, ankyrin 100.0 2.1E-36 7.2E-41 231.2 14.9 181 20-225 5-199 (253)
17 3d9h_A CDNA FLJ77766, highly s 100.0 1.5E-35 5.3E-40 230.2 19.8 200 14-225 48-264 (285)
18 1k1a_A B-cell lymphoma 3-encod 100.0 1.8E-35 6.2E-40 223.8 19.4 163 53-224 2-191 (241)
19 2dzn_A Probable 26S proteasome 100.0 1.4E-35 4.9E-40 222.7 18.6 177 25-224 2-182 (228)
20 3d9h_A CDNA FLJ77766, highly s 100.0 2.9E-35 1E-39 228.6 20.7 174 20-205 87-279 (285)
21 2etb_A Transient receptor pote 100.0 6.4E-36 2.2E-40 228.7 16.6 187 24-225 1-230 (256)
22 3aji_A 26S proteasome non-ATPa 100.0 3.1E-35 1E-39 221.4 19.4 177 23-224 4-180 (231)
23 3kea_A K1L; tropism, ANK repea 100.0 1.6E-35 5.6E-40 230.1 15.5 181 14-224 20-203 (285)
24 3ljn_A Hypothetical protein; a 100.0 1.2E-35 4.1E-40 238.1 15.0 192 22-225 17-253 (364)
25 3v30_A DNA-binding protein rfx 100.0 1.3E-34 4.6E-39 208.6 18.3 170 25-219 2-171 (172)
26 3utm_A Tankyrase-1; tankyrase, 100.0 2.8E-34 9.4E-39 228.4 20.1 194 20-224 53-321 (351)
27 2pnn_A Transient receptor pote 100.0 3.1E-35 1.1E-39 227.0 13.3 198 18-225 6-242 (273)
28 3jxi_A Vanilloid receptor-rela 100.0 1.6E-34 5.4E-39 221.4 15.6 192 22-225 2-234 (260)
29 1n11_A Ankyrin; clathrin, BAND 100.0 5.8E-34 2E-38 233.5 19.4 192 22-224 176-385 (437)
30 2fo1_E LIN-12 protein; beta-ba 100.0 2.7E-34 9.1E-39 231.2 17.0 181 20-224 161-354 (373)
31 1wdy_A 2-5A-dependent ribonucl 100.0 1.3E-33 4.5E-38 218.2 20.0 192 22-224 36-261 (285)
32 1ihb_A P18-INK4C(INK6), cyclin 100.0 7.3E-34 2.5E-38 202.7 17.0 159 24-205 4-162 (162)
33 1wdy_A 2-5A-dependent ribonucl 100.0 2.3E-33 7.8E-38 216.9 20.3 186 20-213 67-283 (285)
34 2rfm_A Putative ankyrin repeat 100.0 3.2E-33 1.1E-37 204.9 19.5 162 19-203 29-190 (192)
35 3utm_A Tankyrase-1; tankyrase, 100.0 2.7E-33 9.1E-38 222.7 20.6 190 21-225 87-348 (351)
36 4b93_B Ankyrin repeat domain-c 100.0 9.6E-35 3.3E-39 223.9 11.8 177 25-225 11-194 (269)
37 1n11_A Ankyrin; clathrin, BAND 100.0 1.2E-33 4E-38 231.6 18.8 192 22-224 11-220 (437)
38 4gpm_A Engineered protein OR26 100.0 9.6E-34 3.3E-38 203.5 15.6 140 62-225 6-145 (169)
39 3v31_A Ankyrin repeat family A 100.0 4.7E-33 1.6E-37 199.6 19.0 159 24-205 2-160 (167)
40 1ikn_D Protein (I-kappa-B-alph 100.0 7.4E-34 2.5E-38 214.7 15.0 188 19-224 39-227 (236)
41 3eu9_A Huntingtin-interacting 100.0 4.5E-33 1.5E-37 210.2 18.3 180 21-225 38-219 (240)
42 1sw6_A Regulatory protein SWI6 100.0 1.5E-33 5E-38 223.1 15.6 171 21-225 127-325 (327)
43 2y1l_E Darpin-8.4; hydrolase-i 100.0 9.4E-33 3.2E-37 198.5 18.4 160 21-203 10-169 (169)
44 3ljn_A Hypothetical protein; a 100.0 3E-33 1E-37 224.2 16.8 149 56-225 134-298 (364)
45 2fo1_E LIN-12 protein; beta-ba 100.0 1.1E-33 3.9E-38 227.5 14.1 177 23-225 123-322 (373)
46 4hbd_A KN motif and ankyrin re 100.0 6.8E-34 2.3E-38 220.0 10.6 175 26-224 77-258 (276)
47 2pnn_A Transient receptor pote 100.0 1.6E-32 5.6E-37 211.7 17.5 190 22-221 51-272 (273)
48 3twr_A Tankyrase-2; ankyrin re 100.0 5.6E-33 1.9E-37 198.8 13.6 162 20-204 3-164 (165)
49 2rfa_A Transient receptor pote 100.0 6.2E-32 2.1E-36 203.5 19.8 180 19-205 31-222 (232)
50 3f6q_A Integrin-linked protein 100.0 1.7E-32 5.8E-37 198.9 14.8 167 24-215 4-170 (179)
51 1bd8_A P19INK4D CDK4/6 inhibit 100.0 6.6E-32 2.3E-36 191.4 17.5 154 25-202 2-155 (156)
52 4g8k_A 2-5A-dependent ribonucl 100.0 3E-32 1E-36 216.2 17.5 190 24-224 24-281 (337)
53 2f8y_A Notch homolog 1, transl 100.0 1.8E-31 6.2E-36 199.7 20.6 164 20-205 53-216 (223)
54 1awc_B Protein (GA binding pro 100.0 1.1E-31 3.9E-36 189.8 18.0 151 25-199 2-152 (153)
55 4g8k_A 2-5A-dependent ribonucl 100.0 8.5E-32 2.9E-36 213.6 19.1 202 14-225 45-310 (337)
56 3kea_A K1L; tropism, ANK repea 100.0 1.3E-32 4.4E-37 213.8 13.7 175 13-214 50-226 (285)
57 3eu9_A Huntingtin-interacting 100.0 5.5E-32 1.9E-36 204.2 16.7 179 22-225 6-186 (240)
58 3hra_A Ankyrin repeat family p 100.0 1.9E-31 6.6E-36 196.5 19.2 161 20-203 34-201 (201)
59 2rfm_A Putative ankyrin repeat 100.0 4.5E-32 1.5E-36 198.8 15.0 149 52-224 27-175 (192)
60 3jxi_A Vanilloid receptor-rela 100.0 6.8E-32 2.3E-36 206.7 15.9 163 23-206 44-251 (260)
61 2etb_A Transient receptor pote 100.0 7.6E-32 2.6E-36 206.0 16.1 178 21-206 39-247 (256)
62 1ycs_B 53BP2, P53BP2; ankyrin 100.0 2.1E-32 7.3E-37 207.3 11.6 178 23-224 3-189 (239)
63 3v31_A Ankyrin repeat family A 100.0 3.2E-31 1.1E-35 190.0 15.9 142 59-224 2-143 (167)
64 4hbd_A KN motif and ankyrin re 100.0 7.1E-31 2.4E-35 203.0 18.0 163 19-203 105-273 (276)
65 2vge_A RELA-associated inhibit 100.0 4E-33 1.4E-37 210.0 2.8 178 22-225 18-197 (229)
66 2y1l_E Darpin-8.4; hydrolase-i 100.0 9.5E-31 3.2E-35 188.0 14.4 145 56-224 10-154 (169)
67 1awc_B Protein (GA binding pro 100.0 9.5E-31 3.2E-35 185.0 13.8 139 61-224 3-141 (153)
68 1oy3_D Transcription factor in 100.0 1.8E-30 6.1E-35 200.6 15.5 167 53-225 2-234 (282)
69 3v30_A DNA-binding protein rfx 100.0 2.5E-30 8.4E-35 186.2 14.9 142 60-225 2-144 (172)
70 3twr_A Tankyrase-2; ankyrin re 100.0 2.1E-30 7.3E-35 185.3 14.2 146 56-225 4-150 (165)
71 3f6q_A Integrin-linked protein 100.0 6.7E-30 2.3E-34 185.2 16.3 143 58-224 3-146 (179)
72 1ihb_A P18-INK4C(INK6), cyclin 100.0 2.9E-30 9.8E-35 184.0 12.2 142 59-224 4-145 (162)
73 3b7b_A Euchromatic histone-lys 100.0 1.9E-29 6.7E-34 190.3 16.7 164 52-224 3-185 (237)
74 1bi7_B P16INK4A, MTS1, multipl 100.0 3.9E-30 1.3E-34 182.4 10.9 146 53-223 5-151 (156)
75 1d9s_A Cyclin-dependent kinase 100.0 1.4E-29 4.7E-34 175.6 13.0 132 52-205 4-136 (136)
76 1s70_B 130 kDa myosin-binding 100.0 2E-29 6.8E-34 196.6 13.9 171 31-225 4-241 (299)
77 2vge_A RELA-associated inhibit 100.0 8.1E-30 2.8E-34 191.9 10.0 159 42-224 2-164 (229)
78 1bd8_A P19INK4D CDK4/6 inhibit 100.0 3.5E-29 1.2E-33 177.3 12.5 140 60-225 2-142 (156)
79 3t8k_A Uncharacterized protein 100.0 1.3E-29 4.4E-34 184.8 9.8 160 26-213 7-184 (186)
80 1n0r_A 4ANK, 4 ankyrin repeats 100.0 1.5E-27 5.2E-32 162.6 15.8 126 59-205 1-126 (126)
81 1ycs_B 53BP2, P53BP2; ankyrin 100.0 2.2E-28 7.5E-33 185.2 11.9 141 58-223 3-144 (239)
82 1bi7_B P16INK4A, MTS1, multipl 100.0 4.5E-28 1.5E-32 171.8 10.9 143 21-187 8-151 (156)
83 2jab_A H10-2-G3; HER2, darpin, 100.0 2.2E-27 7.5E-32 164.4 13.9 127 56-203 10-136 (136)
84 1d9s_A Cyclin-dependent kinase 99.9 2.7E-27 9.4E-32 163.9 13.2 130 19-171 6-136 (136)
85 1sw6_A Regulatory protein SWI6 99.9 3.2E-28 1.1E-32 192.5 6.9 163 29-225 101-292 (327)
86 3t8k_A Uncharacterized protein 99.9 1.4E-27 4.7E-32 174.1 7.7 140 60-225 6-163 (186)
87 1n0r_A 4ANK, 4 ankyrin repeats 99.9 6.9E-26 2.4E-30 154.3 15.6 126 24-171 1-126 (126)
88 2b0o_E UPLC1; arfgap, structur 99.9 6.3E-26 2.2E-30 177.2 16.9 142 60-225 151-295 (301)
89 2jab_A H10-2-G3; HER2, darpin, 99.9 2.9E-26 1E-30 158.7 13.3 126 22-169 11-136 (136)
90 3c5r_A BARD-1, BRCA1-associate 99.9 6.5E-26 2.2E-30 157.1 13.8 114 107-225 5-118 (137)
91 3c5r_A BARD-1, BRCA1-associate 99.9 1.4E-26 4.6E-31 160.6 7.8 130 55-205 5-134 (137)
92 2aja_A Ankyrin repeat family p 99.9 1.2E-28 4.1E-33 197.7 -3.0 161 24-213 91-255 (376)
93 3ui2_A Signal recognition part 99.9 6.2E-26 2.1E-30 172.3 12.0 143 22-205 42-185 (244)
94 3ehr_A Osteoclast-stimulating 99.9 1.9E-26 6.4E-31 172.6 8.5 135 56-211 69-204 (222)
95 3aaa_C Myotrophin, protein V-1 99.9 2.6E-25 8.8E-30 151.3 12.4 112 109-225 4-115 (123)
96 3deo_A Signal recognition part 99.9 1.6E-25 5.5E-30 162.7 11.7 140 22-202 41-181 (183)
97 2b0o_E UPLC1; arfgap, structur 99.9 4.9E-25 1.7E-29 172.2 11.9 140 25-193 151-299 (301)
98 3aaa_C Myotrophin, protein V-1 99.9 2.6E-24 9E-29 146.3 13.6 113 56-189 3-115 (123)
99 3jue_A Arfgap with coiled-coil 99.9 2.5E-24 8.7E-29 172.0 14.2 145 58-223 197-344 (368)
100 3lvq_E ARF-GAP with SH3 domain 99.9 4E-24 1.4E-28 177.9 15.7 143 60-220 132-277 (497)
101 2aja_A Ankyrin repeat family p 99.9 1.9E-26 6.4E-31 184.9 1.2 164 25-225 65-234 (376)
102 3ehr_A Osteoclast-stimulating 99.9 1E-24 3.5E-29 163.1 8.2 134 23-179 71-205 (222)
103 3deo_A Signal recognition part 99.9 3E-24 1E-28 156.0 10.2 112 108-225 40-152 (183)
104 1dcq_A PYK2-associated protein 99.9 2.4E-23 8.1E-28 160.9 15.6 129 62-205 132-263 (278)
105 3ui2_A Signal recognition part 99.9 1.7E-25 5.7E-30 169.9 2.1 113 56-189 41-153 (244)
106 1n0q_A 3ANK, 3 ankyrin repeats 99.9 5.8E-23 2E-27 132.7 11.9 93 111-205 1-93 (93)
107 3lvq_E ARF-GAP with SH3 domain 99.9 1.5E-22 5.1E-27 168.5 14.8 134 26-188 133-275 (497)
108 1dcq_A PYK2-associated protein 99.9 2.7E-22 9.1E-27 155.0 15.1 126 26-171 131-263 (278)
109 2l6b_A NR1C; ankyrin, consensu 99.9 3.3E-23 1.1E-27 139.1 8.3 110 107-221 4-113 (115)
110 3jue_A Arfgap with coiled-coil 99.9 1.4E-22 4.8E-27 162.0 13.0 160 24-205 198-364 (368)
111 1n0q_A 3ANK, 3 ankyrin repeats 99.9 4.5E-22 1.5E-26 128.5 11.8 93 59-171 1-93 (93)
112 2l6b_A NR1C; ankyrin, consensu 99.9 3.1E-22 1.1E-26 134.3 8.9 109 55-184 4-112 (115)
113 2zgd_A 3 repeat synthetic anky 99.8 5.6E-19 1.9E-23 117.5 10.9 94 104-199 16-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.8 4.6E-19 1.6E-23 117.9 9.7 93 53-165 17-109 (110)
115 1gp8_A Protein (scaffolding pr 57.8 7.5 0.00026 19.4 1.9 18 28-45 16-33 (40)
116 3mkq_B Coatomer subunit alpha; 55.8 49 0.0017 23.0 6.7 131 25-202 8-140 (177)
117 3zrh_A Ubiquitin thioesterase 28.6 1.7E+02 0.0058 23.5 6.4 48 120-167 30-90 (454)
118 4g26_A Pentatricopeptide repea 26.1 70 0.0024 26.2 4.1 149 27-202 31-200 (501)
119 3zrh_A Ubiquitin thioesterase 24.0 1E+02 0.0035 24.7 4.4 59 69-134 30-91 (454)
No 1
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=1.8e-37 Score=239.95 Aligned_cols=195 Identities=20% Similarity=0.131 Sum_probs=142.4
Q ss_pred cCCCChHHHHHHHcCCcHHHHHHHHhhCCc-cccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhccccc
Q 036326 22 QSQIDPNLFKATAAGNSEPFKDMAREICPS-LLLQVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGA 100 (225)
Q Consensus 22 ~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~ 100 (225)
+..|+||||.|++.|+.+++++|++.+... .++.++..|.|| ||+|+..|+.+++++|+++|++++..+ ..|.++
T Consensus 6 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~-L~~A~~~g~~~~v~~Ll~~ga~~~~~~---~~g~tp 81 (282)
T 1oy3_D 6 TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTA-LHLAAILGEASTVEKLYAAGAGVLVAE---RGGHTA 81 (282)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCH-HHHHHHHTCHHHHHHHHHTTCCSSCCC---TTSCCH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCH-HHHHHHcCCHHHHHHHHHcCCCCCCCC---CCCCCH
Confidence 445666666666666666666666555431 245566666666 666666666666666666666665332 122222
Q ss_pred ch-----------------------------------------------------------------hhhhcccccCccH
Q 036326 101 SR-----------------------------------------------------------------QTIRMTNQVKHTA 115 (225)
Q Consensus 101 ~~-----------------------------------------------------------------~~~~~~~~~g~t~ 115 (225)
++ ..++.++..|.||
T Consensus 82 L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~ 161 (282)
T 1oy3_D 82 LHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTP 161 (282)
T ss_dssp HHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCH
T ss_pred HHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCH
Confidence 21 1245677789999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCccccccCcCCcHHHHHHHcCCHHH
Q 036326 116 LHQAVFHITVDVVKILTREDPDYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVDNWGWNFLHYAVFSFEVEE 195 (225)
Q Consensus 116 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 195 (225)
||+|+..|+.+++++|++.|++++...+..|.||||+|+..|+.+++++|+++|++ ++.++..|+||||+|+..|+.++
T Consensus 162 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad-~~~~d~~g~tpL~~A~~~~~~~~ 240 (282)
T 1oy3_D 162 LHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGAD-PTARMYGGRTPLGSALLRPNPIL 240 (282)
T ss_dssp HHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHTSSCHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCC-CcccccCCCCHHHHHHHcCCcHH
Confidence 99999999999999999999998843335699999999999999999999999988 99999999999999999999999
Q ss_pred HHHHHHhchhhhccccCCCCCCCcchhcc
Q 036326 196 LRNLVDNMLASSLMNEGDAKGKSNVHFFA 224 (225)
Q Consensus 196 ~~~Ll~~g~~~~~~~~~d~~g~tpl~~a~ 224 (225)
+++|+++|++ ++.+|..|.|||++|.
T Consensus 241 v~~Ll~~ga~---~~~~~~~g~tpl~~a~ 266 (282)
T 1oy3_D 241 ARLLRAHGAP---EPEDGGDKLSPCSSSG 266 (282)
T ss_dssp HHHHHHTTCC---CCCCC-----------
T ss_pred HHHHHHcCCC---cCcCCCcccccccccC
Confidence 9999999999 8999999999999885
No 2
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=9.1e-37 Score=229.78 Aligned_cols=178 Identities=20% Similarity=0.180 Sum_probs=167.0
Q ss_pred CcCCCChHHHHHHHcCCcHHHHHHHHhhCCccccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhccccc
Q 036326 21 SQSQIDPNLFKATAAGNSEPFKDMAREICPSLLLQVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGA 100 (225)
Q Consensus 21 ~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~ 100 (225)
....|.||||.|+..|+.+++++|++.+. .++..+..|.|| ||+|+..|+.+++++|+++|++++
T Consensus 36 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~--~~~~~~~~g~t~-L~~A~~~~~~~~v~~Ll~~g~~~~------------ 100 (231)
T 3aji_A 36 TDQDSRTALHWACSAGHTEIVEFLLQLGV--PVNDKDDAGWSP-LHIAASAGXDEIVKALLVKGAHVN------------ 100 (231)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHTTC--CSCCCCTTSCCH-HHHHHHHTCHHHHHHHHHTTCCTT------------
T ss_pred CCCCCCCHHHHHHHcCcHHHHHHHHHhCC--CCCCcCCCCCCH-HHHHHHcCHHHHHHHHHHcCCCCC------------
Confidence 45678999999999999999999998765 477789999999 999999999999999999999988
Q ss_pred chhhhhcccccCccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCccccccCcC
Q 036326 101 SRQTIRMTNQVKHTALHQAVFHITVDVVKILTREDPDYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVDNWG 180 (225)
Q Consensus 101 ~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~ 180 (225)
.++..|.||||+|+..|+.+++++|++.|.+++ ..+..|.||||+|+..|+.+++++|++++++ ++.++..|
T Consensus 101 ------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g 172 (231)
T 3aji_A 101 ------AVNQNGCTPLHYAASKNRHEIAVMLLEGGANPD-AKDHYDATAMHRAAAKGNLKMVHILLFYKAS-TNIQDTEG 172 (231)
T ss_dssp ------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-SCCCCTTS
T ss_pred ------CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCcHHHHHHHcCCHHHHHHHHhcCCC-ccccCCCC
Confidence 788899999999999999999999999999987 7888999999999999999999999999988 99999999
Q ss_pred CcHHHHHHHcCCHHHHHHHHHhchhhhccccCCCCCCCcchhcc
Q 036326 181 WNFLHYAVFSFEVEELRNLVDNMLASSLMNEGDAKGKSNVHFFA 224 (225)
Q Consensus 181 ~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~a~ 224 (225)
+||||+|+..|+.+++++|+++|++ ++.+|..|+||+|+|+
T Consensus 173 ~t~L~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~t~l~~A~ 213 (231)
T 3aji_A 173 NTPLHLACDEERVEEAKFLVTQGAS---IYIENKEEKTPLQVAK 213 (231)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCC---SCCCCTTSCCHHHHSC
T ss_pred CCHHHHHHHCCCHHHHHHHHHCCCC---CCCCCCCCCCHHHHHH
Confidence 9999999999999999999999999 8889999999999986
No 3
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=1.1e-36 Score=230.10 Aligned_cols=197 Identities=16% Similarity=0.149 Sum_probs=162.8
Q ss_pred cccCcCCCChHHHHHHHcCCcHHHHHHHHhhCCccccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhcc
Q 036326 18 GEISQSQIDPNLFKATAAGNSEPFKDMAREICPSLLLQVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESG 97 (225)
Q Consensus 18 ~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~ 97 (225)
.+..+..|.||||.|+..|+.+++++|++.+. .++..+..|.|| ||+|+..|+.+++++|++.|++++..+ ..+
T Consensus 4 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~--~~~~~~~~g~t~-L~~A~~~~~~~~v~~Ll~~g~~~~~~~---~~g 77 (237)
T 3b7b_A 4 FKMEHQNKRSPLHAAAEAGHVDICHMLVQAGA--NIDTCSEDQRTP-LMEAAENNHLEAVKYLIKAGALVDPKD---AEG 77 (237)
T ss_dssp CCCSSCCSCCHHHHHHHHTCHHHHHHHHHTTC--CTTCCCTTCCCH-HHHHHHTTCHHHHHHHHTTTCCCCCCC---TTS
T ss_pred cccccCCCCCHHHHHHHcCcHHHHHHHHHcCC--CcCccCCCCCCH-HHHHHHhCCHHHHHHHHhCCCCCCCCC---CCC
Confidence 34456667788888888888888888877665 356677778888 888888888888888888877776433 223
Q ss_pred cccch-------------------hhhhcccccCccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCcHHHHHHHcCC
Q 036326 98 VGASR-------------------QTIRMTNQVKHTALHQAVFHITVDVVKILTREDPDYPYSANNYSKTPLCMAAEYKD 158 (225)
Q Consensus 98 ~~~~~-------------------~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~g~ 158 (225)
.++++ ..++.++..|.||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+..|+
T Consensus 78 ~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~ 156 (237)
T 3b7b_A 78 STCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDIN-IRDNEENICLHWAAFSGC 156 (237)
T ss_dssp CCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHHCC
T ss_pred CcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-ccCCCCCCHHHHHHHCCC
Confidence 33322 1223566789999999999999999999999999987 788899999999999999
Q ss_pred HHHHHHHHhhCCCccccccCcCCcHHHHHHHcCCHHHHHHHHHhchhhhccccCCCCCCCcchhccC
Q 036326 159 ARVVEAIISRNPECYELVDNWGWNFLHYAVFSFEVEELRNLVDNMLASSLMNEGDAKGKSNVHFFAA 225 (225)
Q Consensus 159 ~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~a~~ 225 (225)
.+++++|++.|++ ++.++..|.||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|++
T Consensus 157 ~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad---~~~~d~~g~t~l~~A~~ 219 (237)
T 3b7b_A 157 VDIAEILLAAKCD-LHAVNIHGDSPLHIAARENRYDCVVLFLSRDSD---VTLKNKEGETPLQCASL 219 (237)
T ss_dssp HHHHHHHHTTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC---TTCCCTTSCCHHHHSCT
T ss_pred HHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCC---CCccCCCCCCHHHHHHH
Confidence 9999999999987 999999999999999999999999999999999 88889999999999974
No 4
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=1.5e-36 Score=227.99 Aligned_cols=182 Identities=16% Similarity=0.121 Sum_probs=165.1
Q ss_pred CcCCCChHHHHHHHcCCcHHHHHHHHhhCCccccc-cCCCCCCHHHHHHHhcCcHHHHHHHHhcC--ccCccchhhhhcc
Q 036326 21 SQSQIDPNLFKATAAGNSEPFKDMAREICPSLLLQ-VNAKGDSRSLLNATKFGHCDIASVLIERA--KLVEHEDEELESG 97 (225)
Q Consensus 21 ~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~--~~~~~~~~~~~~~ 97 (225)
.+..|.||||.|+..|+.+++++|++.+....+.. .+..|.|| ||+|+..|+.+++++|++.| .+++
T Consensus 32 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~-L~~A~~~~~~~~~~~Ll~~g~~~~~~--------- 101 (228)
T 2dzn_A 32 KDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTP-FHIACSVGNLEVVKSLYDRPLKPDLN--------- 101 (228)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCH-HHHHHHHCCHHHHHHHHSSSSCCCTT---------
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCH-HHHHHHcCCHHHHHHHHhCCCCcccc---------
Confidence 45678899999999999999999998875445666 78889999 99999999999999999988 6666
Q ss_pred cccchhhhhcccccCccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCcccccc
Q 036326 98 VGASRQTIRMTNQVKHTALHQAVFHITVDVVKILTREDPDYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVD 177 (225)
Q Consensus 98 ~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~ 177 (225)
.++..|.||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+..|+.+++++|++.+..+++.++
T Consensus 102 ---------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d 171 (228)
T 2dzn_A 102 ---------KITNQGVTCLHLAVGKKWFEVSQFLIENGASVR-IKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQD 171 (228)
T ss_dssp ---------CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSC-CCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCC
T ss_pred ---------cCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCcc-ccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcC
Confidence 778899999999999999999999999999988 7888999999999999999999999999944499999
Q ss_pred CcCCcHHHHHHHcCCHHHHHHHH-HhchhhhccccCCCCCCCcchhccC
Q 036326 178 NWGWNFLHYAVFSFEVEELRNLV-DNMLASSLMNEGDAKGKSNVHFFAA 225 (225)
Q Consensus 178 ~~~~t~l~~a~~~~~~~~~~~Ll-~~g~~~~~~~~~d~~g~tpl~~a~~ 225 (225)
..|+||||+|+..|+.+++++|+ ++|++ ++.+|..|+||+|+|++
T Consensus 172 ~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~---~~~~~~~g~t~l~~A~~ 217 (228)
T 2dzn_A 172 KQGWTPLFHALAEGHGDAAVLLVEKYGAE---YDLVDNKGAKAEDVALN 217 (228)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHHHCCC---SCCBCTTSCBGGGGCSS
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHhcCCC---CCccCCCCCcHHHHHHH
Confidence 99999999999999999999999 89999 88999999999999964
No 5
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=1e-36 Score=218.99 Aligned_cols=156 Identities=25% Similarity=0.274 Sum_probs=147.4
Q ss_pred hHHHHHHHcCCcHHHHHHHHhhCCccccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhcccccchhhhh
Q 036326 27 PNLFKATAAGNSEPFKDMAREICPSLLLQVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGASRQTIR 106 (225)
Q Consensus 27 ~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (225)
++|+.||+.|+.++|+.|++.+. +++.+|..|.|| ||+|+..++.+++++|++.|++++
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Ga--dvn~~d~~g~t~-l~~a~~~~~~~~~~~ll~~gad~~------------------ 64 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGA--DVNASDSDGRTP-LHHAAENGHKEVVKLLISKGADVN------------------ 64 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTC--CTTCCCTTSCCH-HHHHHHTTCHHHHHHHHHTTCCTT------------------
T ss_pred HHHHHHHHcCCHHHHHHHHHCCC--CCCCcCCCCCCH-HHHHHHcCCHHHHHHHHhcccchh------------------
Confidence 46999999999999999998887 578899999999 999999999999999999999999
Q ss_pred cccccCccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCccccccCcCCcHHHH
Q 036326 107 MTNQVKHTALHQAVFHITVDVVKILTREDPDYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVDNWGWNFLHY 186 (225)
Q Consensus 107 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~ 186 (225)
.++..|.||||+|+..|+.+++++|++.|++++ ..+..|+||||+|+..|+.+++++|+++|++ ++.+|..|+||||+
T Consensus 65 ~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn-~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad-~~~~d~~G~TpL~~ 142 (169)
T 4gpm_A 65 AKDSDGRTPLHHAAENGHKEVVKLLISKGADVN-AKDSDGRTPLHHAAENGHKEVVKLLISKGAD-VNTSDSDGRTPLDL 142 (169)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHH
T ss_pred hhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccCCCCCCHHHH
Confidence 889999999999999999999999999999998 7899999999999999999999999999998 99999999999999
Q ss_pred HHHcCCHHHHHHHHHhchh
Q 036326 187 AVFSFEVEELRNLVDNMLA 205 (225)
Q Consensus 187 a~~~~~~~~~~~Ll~~g~~ 205 (225)
|+..|+.+++++|+++||+
T Consensus 143 A~~~g~~~iv~~Ll~~GA~ 161 (169)
T 4gpm_A 143 AREHGNEEVVKLLEKQGGW 161 (169)
T ss_dssp HHHTTCHHHHHHHHTC---
T ss_pred HHHcCCHHHHHHHHHCCCC
Confidence 9999999999999999998
No 6
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=4.5e-37 Score=234.84 Aligned_cols=178 Identities=14% Similarity=0.088 Sum_probs=167.7
Q ss_pred cCCCChHHHHHHHcCCcHHHHHHHHhhCCccccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCc-cCccchhhhhccccc
Q 036326 22 QSQIDPNLFKATAAGNSEPFKDMAREICPSLLLQVNAKGDSRSLLNATKFGHCDIASVLIERAK-LVEHEDEELESGVGA 100 (225)
Q Consensus 22 ~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~-~~~~~~~~~~~~~~~ 100 (225)
+..|.||||.|+..|+.+++++|++.+. +++..+..|.|| ||+|+..|+.+++++|++.+. +++
T Consensus 54 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~--~~~~~~~~g~t~-L~~A~~~~~~~~v~~Ll~~~~~~~~------------ 118 (253)
T 1yyh_A 54 DRTGETALHLAARYSRSDAAKRLLEASA--DANIQDNMGRTP-LHAAVSADAQGVFQILIRNRATDLD------------ 118 (253)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTTC--CTTCCCTTSCCH-HHHHHHHTCHHHHHHHHHSTTSCTT------------
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCC--CCCCCCCCCCCH-HHHHHHcCCHHHHHHHHHcCCCCcc------------
Confidence 5679999999999999999999998876 477789999999 999999999999999999987 666
Q ss_pred chhhhhcccccCccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCccccccCcC
Q 036326 101 SRQTIRMTNQVKHTALHQAVFHITVDVVKILTREDPDYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVDNWG 180 (225)
Q Consensus 101 ~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~ 180 (225)
.++..|.||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+..|+.+++++|+++|++ ++.++..|
T Consensus 119 ------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g 190 (253)
T 1yyh_A 119 ------ARMHDGTTPLILAARLAVEGMLEDLINSHADVN-AVDDLGKSALHWAAAVNNVDAAVVLLKNGAN-KDMQNNRE 190 (253)
T ss_dssp ------CCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTT-CBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTS
T ss_pred ------ccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCC
Confidence 778899999999999999999999999999988 7888999999999999999999999999988 99999999
Q ss_pred CcHHHHHHHcCCHHHHHHHHHhchhhhccccCCCCCCCcchhccC
Q 036326 181 WNFLHYAVFSFEVEELRNLVDNMLASSLMNEGDAKGKSNVHFFAA 225 (225)
Q Consensus 181 ~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~a~~ 225 (225)
.||||+|+..|+.+++++|+++|++ ++.+|..|+||+|+|++
T Consensus 191 ~tpL~~A~~~~~~~~v~~Ll~~ga~---~~~~d~~g~tpl~~A~~ 232 (253)
T 1yyh_A 191 ETPLFLAAREGSYETAKVLLDHFAN---RDITDHMDRLPRDIAQE 232 (253)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCC---TTCCCTTCCCHHHHHHH
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCCC---ccccccCCCCHHHHHHH
Confidence 9999999999999999999999999 88899999999999863
No 7
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=4e-37 Score=237.16 Aligned_cols=178 Identities=17% Similarity=0.149 Sum_probs=146.3
Q ss_pred cCCCChHHHHHHHcCCcH-HHHHHHHhhCCccccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhccccc
Q 036326 22 QSQIDPNLFKATAAGNSE-PFKDMAREICPSLLLQVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGA 100 (225)
Q Consensus 22 ~~~~~~~L~~A~~~g~~~-~v~~Ll~~~~~~~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~ 100 (225)
...+.+||+.|+..++.+ +++.|+..+. +++..|..|.|| ||+|+..|+.+++++|++.|++++
T Consensus 49 ~~~~~t~L~~a~~~~~~~~~v~~Ll~~Ga--dvn~~d~~G~Tp-Lh~A~~~g~~~~v~~Ll~~~a~~~------------ 113 (269)
T 4b93_B 49 DPEFCHPLCQCPKCAPAQKRLAKVPASGL--GVNVTSQDGSSP-LHVAALHGRADLIPLLLKHGANAG------------ 113 (269)
T ss_dssp --------------------------CCC--CTTCCCTTSCCH-HHHHHHTTCTTHHHHHHHTTCCTT------------
T ss_pred CccCCCHHHHHHHhCCHHHHHHHHHHCCC--CCCCcCCCCCCH-HHHHHHcCcHHHHHHHHhcCCCcC------------
Confidence 456789999999888764 7788887776 478899999999 999999999999999999999998
Q ss_pred chhhhhcccccCccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCccccccCcC
Q 036326 101 SRQTIRMTNQVKHTALHQAVFHITVDVVKILTREDPDYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVDNWG 180 (225)
Q Consensus 101 ~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~ 180 (225)
.++..|.||+++|+..++.+++++|++.|++++ ..+..|.||||+|+..|+.+++++|+++|++ ++.++..|
T Consensus 114 ------~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n-~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gad-vn~~~~~g 185 (269)
T 4b93_B 114 ------ARNADQAVPLHLACQQGHFQVVKCLLDSNAKPN-KKDLSGNTPLIYACSGGHHELVALLLQHGAS-INASNNKG 185 (269)
T ss_dssp ------CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSC-CCCTTCCCHHHHHHHTTCGGGHHHHHHTTCC-TTCBCTTS
T ss_pred ------ccCCCCCCccccccccChHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHCCCHHHHHHHHHCCCC-CCccccCC
Confidence 788899999999999999999999999999988 7899999999999999999999999999998 99999999
Q ss_pred CcHHHHHHHcCCHHHHHHHHHhchhhhccccCCCCCCCcchhccC
Q 036326 181 WNFLHYAVFSFEVEELRNLVDNMLASSLMNEGDAKGKSNVHFFAA 225 (225)
Q Consensus 181 ~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~a~~ 225 (225)
+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|++
T Consensus 186 ~t~Lh~A~~~g~~~~v~~Ll~~Gad---~~~~d~~G~TpL~~A~~ 227 (269)
T 4b93_B 186 NTALHEAVIEKHVFVVELLLLHGAS---VQVLNKRQRTAVDCAEQ 227 (269)
T ss_dssp CBHHHHHHHTTCHHHHHHHHHTTCC---SCCCCTTSCCSGGGSCT
T ss_pred CcHHHHHHHcCCHHHHHHHHHCCCC---CCCcCCCCCCHHHHHHh
Confidence 9999999999999999999999999 89999999999999975
No 8
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=3e-36 Score=225.80 Aligned_cols=177 Identities=14% Similarity=0.088 Sum_probs=166.3
Q ss_pred cCCCChHHHHHHHcCCcHHHHHHHHhhCCccccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCc-cCccchhhhhccccc
Q 036326 22 QSQIDPNLFKATAAGNSEPFKDMAREICPSLLLQVNAKGDSRSLLNATKFGHCDIASVLIERAK-LVEHEDEELESGVGA 100 (225)
Q Consensus 22 ~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~-~~~~~~~~~~~~~~~ 100 (225)
+..|.||||.|+..|+.+++++|++.+. .++..+..|.|| ||+|+..|+.+++++|++.+. +++
T Consensus 22 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~--~~~~~~~~g~t~-L~~A~~~~~~~~v~~Ll~~~~~~~~------------ 86 (223)
T 2f8y_A 22 DRTGETALHLAARYSRSDAAKRLLEASA--DANIQDNMGRTP-LHAAVSADAQGVFQILIRNRATDLD------------ 86 (223)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTTC--CTTCCCTTSCCH-HHHHHHTTCHHHHHHHHHBTTSCTT------------
T ss_pred CCCCCchHHHHHHcCCHHHHHHHHHcCC--CCCCcCCCCCCH-HHHHHHcCCHHHHHHHHHcCCCCcc------------
Confidence 4679999999999999999999998876 477799999999 999999999999999999887 666
Q ss_pred chhhhhcccccCccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCccccccCcC
Q 036326 101 SRQTIRMTNQVKHTALHQAVFHITVDVVKILTREDPDYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVDNWG 180 (225)
Q Consensus 101 ~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~ 180 (225)
.++..|.||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+..|+.+++++|+++|++ ++.++..|
T Consensus 87 ------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g 158 (223)
T 2f8y_A 87 ------ARMHDGTTPLILAARLAVEGMLEDLINSHADVN-AVDDLGKSALHWAAAVNNVDAAVVLLKNGAN-KDMQNNRE 158 (223)
T ss_dssp ------CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT-CBCTTSCBHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTC
T ss_pred ------cCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCc-CcCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCC
Confidence 778899999999999999999999999999987 7888999999999999999999999999987 99999999
Q ss_pred CcHHHHHHHcCCHHHHHHHHHhchhhhccccCCCCCCCcchhcc
Q 036326 181 WNFLHYAVFSFEVEELRNLVDNMLASSLMNEGDAKGKSNVHFFA 224 (225)
Q Consensus 181 ~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~a~ 224 (225)
.||||+|+..|+.+++++|+++|++ ++.+|..|.||+|+|+
T Consensus 159 ~t~L~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~t~l~~A~ 199 (223)
T 2f8y_A 159 ETPLFLAAREGSYETAKVLLDHFAN---RDITDHMDRLPRDIAQ 199 (223)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCC---TTCCCTTCCCHHHHHH
T ss_pred cCHHHHHHHcCCHHHHHHHHHcCCC---CccccccCCCHHHHHH
Confidence 9999999999999999999999999 8888999999999986
No 9
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=3.8e-36 Score=230.76 Aligned_cols=177 Identities=19% Similarity=0.146 Sum_probs=154.2
Q ss_pred CcCCCChHHHHHHHcCCcHHHHHHHHhhCCccccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhccccc
Q 036326 21 SQSQIDPNLFKATAAGNSEPFKDMAREICPSLLLQVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGA 100 (225)
Q Consensus 21 ~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~ 100 (225)
.+..|.||||.|+..|+.+++++|++.+. +++..+..|.|| ||+|+..|+.+++++|++.|++++
T Consensus 32 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~--~~~~~~~~g~t~-L~~A~~~~~~~~v~~Ll~~g~~~~------------ 96 (261)
T 2xai_A 32 ITADHVSPLHEACLGGHLSCVKILLKHGA--QVNGVTADWHTP-LFNACVSGSWDCVNLLLQHGASVQ------------ 96 (261)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTC--CTTCCCTTSCCH-HHHHHHHTCHHHHHHHHHTTCCSS------------
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHCCC--CCCCCCCCCCCH-HHHHHHcCCHHHHHHHHHCCCCCC------------
Confidence 35567788888888888888888887765 466677888888 888888888888888888887776
Q ss_pred chhhhhcccccCccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCccccccCcC
Q 036326 101 SRQTIRMTNQVKHTALHQAVFHITVDVVKILTREDPDYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVDNWG 180 (225)
Q Consensus 101 ~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~ 180 (225)
. +..|.||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+..|+.+++++|+++|++ ++. +..|
T Consensus 97 ------~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~-~~~g 166 (261)
T 2xai_A 97 ------P-ESDLASPIHEAARRGHVECVNSLIAYGGNID-HKISHLGTPLYLACENQQRACVKKLLESGAD-VNQ-GKGQ 166 (261)
T ss_dssp ------C-SCTTCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCBTTTBCHHHHHHHTTCHHHHHHHHHHTCC-TTC-CBTT
T ss_pred ------C-CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCC-cCCCCCCCHHHHHHHhCCHHHHHHHHHcCCC-CCC-CCCC
Confidence 2 3458899999999999999999999999988 7888999999999999999999999999987 774 7889
Q ss_pred CcHHHHHHHcCCHHHHHHHHHhchhhhccccCCCCCCCcchhccC
Q 036326 181 WNFLHYAVFSFEVEELRNLVDNMLASSLMNEGDAKGKSNVHFFAA 225 (225)
Q Consensus 181 ~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~a~~ 225 (225)
+||||+|+..|+.+++++|+++|++ ++.+|.+|+||+|+|++
T Consensus 167 ~t~Lh~A~~~~~~~~v~~Ll~~gad---~~~~d~~g~tpl~~A~~ 208 (261)
T 2xai_A 167 DSPLHAVARTASEELACLLMDFGAD---TQAKNAEGKRPVELVPP 208 (261)
T ss_dssp BCHHHHHHHHTCHHHHHHHHHTTCC---TTCCCTTSCCGGGGSCT
T ss_pred CChHHHHHHcCCHHHHHHHHHcCCC---CCCcCCCCCChhhhccc
Confidence 9999999999999999999999999 88999999999999973
No 10
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=5.6e-36 Score=226.66 Aligned_cols=195 Identities=18% Similarity=0.118 Sum_probs=145.4
Q ss_pred cCCCChHHHHHHHcCCcHHHHHHHHh--hCCccccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhcccc
Q 036326 22 QSQIDPNLFKATAAGNSEPFKDMARE--ICPSLLLQVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVG 99 (225)
Q Consensus 22 ~~~~~~~L~~A~~~g~~~~v~~Ll~~--~~~~~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~ 99 (225)
+.+|+||||.|++.|+.+++++|++. .....++..+..|.|| ||+|+..|+.+++++|++.|++++..+ ..+.+
T Consensus 6 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~-L~~A~~~~~~~~v~~Ll~~g~~~~~~~---~~g~t 81 (241)
T 1k1a_A 6 DEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTP-LHLAVITTLPSVVRLLVTAGASPMALD---RHGQT 81 (241)
T ss_dssp -CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCH-HHHHHHTTCHHHHHHHHHTTCCTTCCC---TTSCC
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCH-HHHHHHcCCHHHHHHHHHcCCCccccC---CCCCC
Confidence 34455555555555555555555531 1112344455555555 555555555555555555555554322 12222
Q ss_pred cch------------h----------hhhcccccCccHHHHHHHcCCHHHHHHHHhcCCCCCCCCC-CCCCcHHHHHHHc
Q 036326 100 ASR------------Q----------TIRMTNQVKHTALHQAVFHITVDVVKILTREDPDYPYSAN-NYSKTPLCMAAEY 156 (225)
Q Consensus 100 ~~~------------~----------~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~-~~~~t~l~~a~~~ 156 (225)
+++ . .++.++..|.||||+|+..|+.+++++|++.|++++ ..+ ..|.||||+|+..
T Consensus 82 ~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~~g~t~L~~A~~~ 160 (241)
T 1k1a_A 82 AAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADID-AVDIKSGRSPLIHAVEN 160 (241)
T ss_dssp HHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTTCCCHHHHHHHT
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcc-cccccCCCcHHHHHHHc
Confidence 221 0 223667889999999999999999999999999988 445 7899999999999
Q ss_pred CCHHHHHHHHhhCCCccccccCcCCcHHHHHHHcCCHHHHHHHHHhchhhhccccCCCCCCCcchhccC
Q 036326 157 KDARVVEAIISRNPECYELVDNWGWNFLHYAVFSFEVEELRNLVDNMLASSLMNEGDAKGKSNVHFFAA 225 (225)
Q Consensus 157 g~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~a~~ 225 (225)
|+.+++++|+++|++ ++.++..|+||||+|+..|+.+++++|+++|++ ++.+|..|+||+|+|++
T Consensus 161 ~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~tpl~~A~~ 225 (241)
T 1k1a_A 161 NSLSMVQLLLQHGAN-VNAQMYSGSSALHSASGRGLLPLVRTLVRSGAD---SSLKNCHNDTPLMVARS 225 (241)
T ss_dssp TCHHHHHHHHHTTCC-TTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC---TTCCCTTSCCTTTTCSS
T ss_pred CCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCC---CCCcCCCCCCHHHHHHh
Confidence 999999999999988 999999999999999999999999999999999 88899999999999974
No 11
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=2.1e-36 Score=228.08 Aligned_cols=184 Identities=20% Similarity=0.237 Sum_probs=162.2
Q ss_pred CCChHHHHHHHcCCcHHHHHHHHh-hCCccccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhcccccch
Q 036326 24 QIDPNLFKATAAGNSEPFKDMARE-ICPSLLLQVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGASR 102 (225)
Q Consensus 24 ~~~~~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~ 102 (225)
.|+||||.|++.|+.+++++|+.. +. +++.+|..|.|| ||+|+..|+.+++++|++.|+++....
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~--~~~~~~~~g~t~-L~~A~~~g~~~~v~~Ll~~~~~~~~~~----------- 67 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGC--EVHQRGAMGETA-LHIAALYDNLEAAMVLMEAAPELVFEP----------- 67 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCS--CTTCCCTTSCCH-HHHHHHTTCHHHHHHHHHHCGGGGGCC-----------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCC--CcccCCCCCCCH-HHHHHHcCCHHHHHHHHHcCchhcccc-----------
Confidence 478999999999999999999976 44 578899999999 999999999999999999998763110
Q ss_pred hhhhcccccCccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCC-------------CCCcHHHHHHHcCCHHHHHHHHhhC
Q 036326 103 QTIRMTNQVKHTALHQAVFHITVDVVKILTREDPDYPYSANN-------------YSKTPLCMAAEYKDARVVEAIISRN 169 (225)
Q Consensus 103 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~-------------~~~t~l~~a~~~g~~~~~~~Ll~~~ 169 (225)
.+.++..|.||||+|+..|+.+++++|++.|++++ ..+. .|.||||+|+..|+.+++++|+++|
T Consensus 68 --~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 144 (232)
T 2rfa_A 68 --MTSELYEGQTALHIAVINQNVNLVRALLARGASVS-ARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHG 144 (232)
T ss_dssp --CCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTT
T ss_pred --ccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCC-cccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 11567789999999999999999999999999987 4433 6999999999999999999999999
Q ss_pred CCccccccCcCCcHHHHHHHcCCHHHH----HHHHHhchhhhc---cccCCCCCCCcchhccC
Q 036326 170 PECYELVDNWGWNFLHYAVFSFEVEEL----RNLVDNMLASSL---MNEGDAKGKSNVHFFAA 225 (225)
Q Consensus 170 ~~~~~~~~~~~~t~l~~a~~~~~~~~~----~~Ll~~g~~~~~---~~~~d~~g~tpl~~a~~ 225 (225)
++ ++.+|..|+||||+|+..|+.+++ ++|+++|++++. .+.+|..|+||||+|++
T Consensus 145 a~-~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~ 206 (232)
T 2rfa_A 145 AD-IRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGV 206 (232)
T ss_dssp CC-TTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHH
T ss_pred CC-CCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHH
Confidence 88 999999999999999999999988 999999998321 16889999999999973
No 12
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=6.2e-36 Score=233.47 Aligned_cols=178 Identities=20% Similarity=0.213 Sum_probs=162.7
Q ss_pred cCCCChHHHHHHHcCCcHHHHHHHHhhCCccccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhcccccc
Q 036326 22 QSQIDPNLFKATAAGNSEPFKDMAREICPSLLLQVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGAS 101 (225)
Q Consensus 22 ~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~ 101 (225)
...+.+|||.||..|+.+++++|+..+. +++..+..|.|| ||+|+..|+.+++++|++.|++++
T Consensus 37 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~--~~~~~~~~g~t~-L~~A~~~g~~~~v~~Ll~~ga~~~------------- 100 (299)
T 1s70_B 37 KFDDGAVFLAACSSGDTEEVLRLLERGA--DINYANVDGLTA-LHQACIDDNVDMVKFLVENGANIN------------- 100 (299)
T ss_dssp EECHHHHHHHHHHHTCHHHHHHHHHHCC--CTTCBCTTCCBH-HHHHHHTTCHHHHHHHHHTTCCTT-------------
T ss_pred ccCCccHHHHHHHcCCHHHHHHHHHcCC--CCcccCCCCCCH-HHHHHHcCCHHHHHHHHHCCCCCC-------------
Confidence 3456799999999999999999998876 477889999999 999999999999999999999998
Q ss_pred hhhhhcccccCccHHHHHHHcCCHHHHHHHHhcCCCCCCCCC--------------------------------------
Q 036326 102 RQTIRMTNQVKHTALHQAVFHITVDVVKILTREDPDYPYSAN-------------------------------------- 143 (225)
Q Consensus 102 ~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~-------------------------------------- 143 (225)
.++..|.||||+|+..|+.+++++|++.|++++ ..+
T Consensus 101 -----~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~ 174 (299)
T 1s70_B 101 -----QPDNEGWIPLHAAASCGYLDIAEYLISQGAHVG-AVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEE 174 (299)
T ss_dssp -----CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred -----CCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCC-CcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhh
Confidence 778899999999999999999999999988765 222
Q ss_pred ----------------------CCCCcHHHHHHHcCCHHHHHHHHhhCCCccccccCcCCcHHHHHHHcCCHHHHHHHHH
Q 036326 144 ----------------------NYSKTPLCMAAEYKDARVVEAIISRNPECYELVDNWGWNFLHYAVFSFEVEELRNLVD 201 (225)
Q Consensus 144 ----------------------~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~ 201 (225)
..|.||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|++
T Consensus 175 ~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~ 253 (299)
T 1s70_B 175 RIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYD-VNIKDYDGWTPLHAAAHWGKEEACRILVE 253 (299)
T ss_dssp HHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHhcCCHHHHHHHHH
Confidence 3578999999999999999999999988 99999999999999999999999999999
Q ss_pred hchhhhccccCCCCCCCcchhccC
Q 036326 202 NMLASSLMNEGDAKGKSNVHFFAA 225 (225)
Q Consensus 202 ~g~~~~~~~~~d~~g~tpl~~a~~ 225 (225)
+|++ ++.+|..|+||||+|++
T Consensus 254 ~gad---~~~~d~~g~t~l~~A~~ 274 (299)
T 1s70_B 254 NLCD---MEAVNKVGQTAFDVADE 274 (299)
T ss_dssp TTCC---TTCCCTTSCCTTTSCCS
T ss_pred cCCC---CCCcCCCCCCHHHHHHH
Confidence 9999 88899999999999964
No 13
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=4.2e-36 Score=230.51 Aligned_cols=174 Identities=17% Similarity=0.130 Sum_probs=161.3
Q ss_pred CCChHHHHHHHcCCcHHHHHHHHhhCCccccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhcccccchh
Q 036326 24 QIDPNLFKATAAGNSEPFKDMAREICPSLLLQVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGASRQ 103 (225)
Q Consensus 24 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~ 103 (225)
+|+||||.|+..|+.+++++|++.+. .++..|..|.|| ||+|+..|+.+++++|++.|++++
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~--~~~~~~~~g~t~-L~~A~~~g~~~~v~~Ll~~g~~~~--------------- 63 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGW--AVNIITADHVSP-LHEACLGGHLSCVKILLKHGAQVN--------------- 63 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTC--CSSCCCTTCCCH-HHHHHHHTCHHHHHHHHHTTCCTT---------------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCC--CCCCcCCCCCCH-HHHHHHcCCHHHHHHHHHCCCCCC---------------
Confidence 58899999999999999999998875 477899999999 999999999999999999999998
Q ss_pred hhhcccccCccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCccccccCcCCcH
Q 036326 104 TIRMTNQVKHTALHQAVFHITVDVVKILTREDPDYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVDNWGWNF 183 (225)
Q Consensus 104 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~t~ 183 (225)
.++..|.||||+|+..|+.+++++|++.|++++ .+..|.||||+|+..|+.+++++|+++|++ ++.++..|+||
T Consensus 64 ---~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~ 137 (261)
T 2xai_A 64 ---GVTADWHTPLFNACVSGSWDCVNLLLQHGASVQ--PESDLASPIHEAARRGHVECVNSLIAYGGN-IDHKISHLGTP 137 (261)
T ss_dssp ---CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSS--CSCTTCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCBTTTBCH
T ss_pred ---CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC--CCCCCCCHHHHHHHcCcHHHHHHHHHcCCC-CCcCCCCCCCH
Confidence 788999999999999999999999999999986 355699999999999999999999999988 99999999999
Q ss_pred HHHHHHcCCHHHHHHHHHhchhhhccccCCCCCCCcchhccC
Q 036326 184 LHYAVFSFEVEELRNLVDNMLASSLMNEGDAKGKSNVHFFAA 225 (225)
Q Consensus 184 l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~a~~ 225 (225)
||+|+..|+.+++++|+++|++ ++. |..|.||||+|++
T Consensus 138 L~~A~~~~~~~~v~~Ll~~g~~---~~~-~~~g~t~Lh~A~~ 175 (261)
T 2xai_A 138 LYLACENQQRACVKKLLESGAD---VNQ-GKGQDSPLHAVAR 175 (261)
T ss_dssp HHHHHHTTCHHHHHHHHHHTCC---TTC-CBTTBCHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHcCCC---CCC-CCCCCChHHHHHH
Confidence 9999999999999999999999 564 7899999999973
No 14
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=4.3e-37 Score=232.52 Aligned_cols=179 Identities=20% Similarity=0.089 Sum_probs=103.1
Q ss_pred CCCChHHHHHHHcCCcHHHHHHHHhhCC--ccccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhccccc
Q 036326 23 SQIDPNLFKATAAGNSEPFKDMAREICP--SLLLQVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGA 100 (225)
Q Consensus 23 ~~~~~~L~~A~~~g~~~~v~~Ll~~~~~--~~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~ 100 (225)
..|+||||.|+..|+.+++++|+..+.. ..++..+..|.|| ||+|+..|+.+++++|+++|++++
T Consensus 6 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~-L~~A~~~~~~~~v~~Ll~~g~~~~------------ 72 (236)
T 1ikn_D 6 EDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTP-LHLAVITNQPEIAEALLGAGCDPE------------ 72 (236)
T ss_dssp -CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCH-HHHHHHTTCHHHHHCCCSCCCCSC------------
T ss_pred CCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCH-HHHHHHcCCHHHHHHHHHcCCCCC------------
Confidence 4455666666666666666666544332 1345555666666 666666666666666666666655
Q ss_pred chhhhhcccccCccHHHHHHHcCCHHHHHHHHhcCCCC-----CCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCcccc
Q 036326 101 SRQTIRMTNQVKHTALHQAVFHITVDVVKILTREDPDY-----PYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYEL 175 (225)
Q Consensus 101 ~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~-----~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~ 175 (225)
.++..|.||||+|+..|+.+++++|++.+.+. ....+..|.||||+|+..|+.+++++|+++|++ ++.
T Consensus 73 ------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~ 145 (236)
T 1ikn_D 73 ------LRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGAD-VNA 145 (236)
T ss_dssp ------CCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCC-TTC
T ss_pred ------CcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCC
Confidence 45555666666666666666666666655431 113444566666666666666666666666555 555
Q ss_pred ccC-cCCcHHHHHHHcCCHHHHHHHHHhchhhhccccCCCCCCCcchhcc
Q 036326 176 VDN-WGWNFLHYAVFSFEVEELRNLVDNMLASSLMNEGDAKGKSNVHFFA 224 (225)
Q Consensus 176 ~~~-~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~a~ 224 (225)
++. .|+||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+
T Consensus 146 ~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~tpl~~A~ 192 (236)
T 1ikn_D 146 QEPCNGRTALHLAVDLQNPDLVSLLLKCGAD---VNRVTYQGYSPYQLTW 192 (236)
T ss_dssp CCTTTCCCHHHHHHHTTCHHHHHHHHTTTCC---SCCCCTTCCCGGGGCT
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CCcccCCCCCHHHHHH
Confidence 554 566666666666666666666666666 5555556666666654
No 15
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=1.3e-35 Score=218.91 Aligned_cols=179 Identities=18% Similarity=0.259 Sum_probs=164.0
Q ss_pred CCCChHHHHHHHcCCcHHHHHHHHhhCCccccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhcccccch
Q 036326 23 SQIDPNLFKATAAGNSEPFKDMAREICPSLLLQVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGASR 102 (225)
Q Consensus 23 ~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~ 102 (225)
..+.+|||.|+..|+.+.++.|+..+. ..++..+..|.|| ||+|+..|+.+++++|++.|++++
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~~~-~~~~~~~~~g~t~-L~~A~~~~~~~~v~~Ll~~g~~~~-------------- 66 (201)
T 3hra_A 3 TYEVGALLEAANQRDTKKVKEILQDTT-YQVDEVDTEGNTP-LNIAVHNNDIEIAKALIDRGADIN-------------- 66 (201)
T ss_dssp CCCTTHHHHHHHTTCHHHHHHHHTCTT-CCTTCCCTTSCCH-HHHHHHHTCHHHHHHHHHTTCCTT--------------
T ss_pred cccccHHHHHHHhccHHHHHHHHHcCC-CCCCCCCCCCCCH-HHHHHHcCCHHHHHHHHHcCCCCC--------------
Confidence 457899999999999999999996654 3578899999999 999999999999999999999998
Q ss_pred hhhhcccccCccHHHHHHHcCCHHHHHHHHhc-CCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCccccccCcCC
Q 036326 103 QTIRMTNQVKHTALHQAVFHITVDVVKILTRE-DPDYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVDNWGW 181 (225)
Q Consensus 103 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~ 181 (225)
.++..|.||||+|+..|+.+++++|++. +.+++ ..+..|.||||+|+..|+.+++++|++.+..+++.++..|+
T Consensus 67 ----~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~ 141 (201)
T 3hra_A 67 ----LQNSISDSPYLYAGAQGRTEILAYMLKHATPDLN-KHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGY 141 (201)
T ss_dssp ----CCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTT-CCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSC
T ss_pred ----CCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccc-cccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCC
Confidence 7889999999999999999999999955 55665 78889999999999999999999999999445999999999
Q ss_pred cHHHHHHHcCC-----HHHHHHHHHhchhhhccccCCCCCCCcchhccC
Q 036326 182 NFLHYAVFSFE-----VEELRNLVDNMLASSLMNEGDAKGKSNVHFFAA 225 (225)
Q Consensus 182 t~l~~a~~~~~-----~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~a~~ 225 (225)
||||+|+..++ .+++++|+++|++ ++.+|..|+||||+|++
T Consensus 142 t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~---~~~~~~~g~t~l~~A~~ 187 (201)
T 3hra_A 142 TALIEAVGLREGNQLYQDIVKLLMENGAD---QSIKDNSGRTAMDYANQ 187 (201)
T ss_dssp CHHHHHHHSSCCSHHHHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHH
T ss_pred CHHHHHHHhccchhhHHHHHHHHHHCCCC---CCccCCCCCCHHHHHHH
Confidence 99999999998 9999999999999 88899999999999863
No 16
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=2.1e-36 Score=231.16 Aligned_cols=181 Identities=22% Similarity=0.280 Sum_probs=139.2
Q ss_pred cCcCCCChHHHHHHHcC-------------CcHHHHHHHHhhCCccccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCcc
Q 036326 20 ISQSQIDPNLFKATAAG-------------NSEPFKDMAREICPSLLLQVNAKGDSRSLLNATKFGHCDIASVLIERAKL 86 (225)
Q Consensus 20 ~~~~~~~~~L~~A~~~g-------------~~~~v~~Ll~~~~~~~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~ 86 (225)
..+..|.||||.|+..| +.+++++|+..+.. .....|..|.|| ||+|+..|+.+++++|++.|++
T Consensus 5 ~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~-~~~~~d~~g~t~-L~~A~~~g~~~~v~~Ll~~g~~ 82 (253)
T 1yyh_A 5 VRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGAS-LHNQTDRTGETA-LHLAARYSRSDAAKRLLEASAD 82 (253)
T ss_dssp ------------------------------------------------CCCTTSCCH-HHHHHHTTCHHHHHHHHHTTCC
T ss_pred CCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCC-cccccCCCCCcH-HHHHHHcCCHHHHHHHHHcCCC
Confidence 44567999999999977 89999999987764 234468999999 9999999999999999999999
Q ss_pred CccchhhhhcccccchhhhhcccccCccHHHHHHHcCCHHHHHHHHhcCC-CCCCCCCCCCCcHHHHHHHcCCHHHHHHH
Q 036326 87 VEHEDEELESGVGASRQTIRMTNQVKHTALHQAVFHITVDVVKILTREDP-DYPYSANNYSKTPLCMAAEYKDARVVEAI 165 (225)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~t~l~~a~~~g~~~~~~~L 165 (225)
++ .++..|.||||+|+..|+.+++++|++.+. +++ ..+..|.||||+|+..|+.+++++|
T Consensus 83 ~~------------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~-~~~~~g~t~L~~A~~~~~~~~v~~L 143 (253)
T 1yyh_A 83 AN------------------IQDNMGRTPLHAAVSADAQGVFQILIRNRATDLD-ARMHDGTTPLILAARLAVEGMLEDL 143 (253)
T ss_dssp TT------------------CCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTT-CCCTTCCCHHHHHHHHTCSSHHHHH
T ss_pred CC------------------CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcc-ccCCCCCcHHHHHHHcChHHHHHHH
Confidence 98 788999999999999999999999999988 555 7888999999999999999999999
Q ss_pred HhhCCCccccccCcCCcHHHHHHHcCCHHHHHHHHHhchhhhccccCCCCCCCcchhccC
Q 036326 166 ISRNPECYELVDNWGWNFLHYAVFSFEVEELRNLVDNMLASSLMNEGDAKGKSNVHFFAA 225 (225)
Q Consensus 166 l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~a~~ 225 (225)
++.|++ ++.++..|+||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|++
T Consensus 144 l~~g~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~tpL~~A~~ 199 (253)
T 1yyh_A 144 INSHAD-VNAVDDLGKSALHWAAAVNNVDAAVVLLKNGAN---KDMQNNREETPLFLAAR 199 (253)
T ss_dssp HHTTCC-TTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHH
T ss_pred HHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CCCcCCCCCCHHHHHHH
Confidence 999988 999999999999999999999999999999999 88899999999999973
No 17
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.5e-35 Score=230.21 Aligned_cols=200 Identities=17% Similarity=0.097 Sum_probs=169.8
Q ss_pred ccCCcccCcCCCChHHHHHHHcCCcHHHHHHHHhhCCccccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhh
Q 036326 14 LDNNGEISQSQIDPNLFKATAAGNSEPFKDMAREICPSLLLQVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEE 93 (225)
Q Consensus 14 ~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~ 93 (225)
+..........|+||||.|+..|+.+++++|++.+. .++.+|..|.|| ||+|+..|+.+++++|++.|++++..+
T Consensus 48 ~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~--~~~~~~~~g~t~-L~~A~~~g~~~~v~~Ll~~ga~~~~~~-- 122 (285)
T 3d9h_A 48 LSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGW--AVNIITADHVSP-LHEACLGGHLSCVKILLKHGAQVNGVT-- 122 (285)
T ss_dssp CCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTC--CSCEECTTCCCH-HHHHHHTTCHHHHHHHHHTTCCSSCCC--
T ss_pred hhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCC--CCCCcCCCCCCH-HHHHHHCCcHHHHHHHHHCCCCCCCCC--
Confidence 444455567789999999999999999999998775 477899999999 999999999999999999999988443
Q ss_pred hhcccccch------------hhhh-----cccccCccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCcHHHHHHHc
Q 036326 94 LESGVGASR------------QTIR-----MTNQVKHTALHQAVFHITVDVVKILTREDPDYPYSANNYSKTPLCMAAEY 156 (225)
Q Consensus 94 ~~~~~~~~~------------~~~~-----~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~ 156 (225)
..+.+++. .++. ..+..|.||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+..
T Consensus 123 -~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-~~d~~g~t~L~~A~~~ 200 (285)
T 3d9h_A 123 -ADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNID-HKISHLGTPLYLACEN 200 (285)
T ss_dssp -TTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTTSCHHHHHHHHTCHHHHHHHHHTTCCTT-CCBTTTBCHHHHHHHT
T ss_pred -CCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-CcCCCCCCHHHHHHHc
Confidence 33444443 1111 123458899999999999999999999999987 7888999999999999
Q ss_pred CCHHHHHHHHhhCCCccccccCcCCcHHHHHHHcCCHHHHHHHHHhchhhhccccCCCCCCCcchhccC
Q 036326 157 KDARVVEAIISRNPECYELVDNWGWNFLHYAVFSFEVEELRNLVDNMLASSLMNEGDAKGKSNVHFFAA 225 (225)
Q Consensus 157 g~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~a~~ 225 (225)
|+.+++++|++.|++ ++ .+..|.||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|++
T Consensus 201 ~~~~~v~~Ll~~ga~-~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad---~~~~d~~g~t~l~~A~~ 264 (285)
T 3d9h_A 201 QQRACVKKLLESGAD-VN-QGKGQDSPLHAVVRTASEELACLLMDFGAD---TQAKNAEGKRPVELVPP 264 (285)
T ss_dssp TCHHHHHHHHHTTCC-TT-CCBTTBCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCGGGGSCT
T ss_pred CcHHHHHHHHHCCCC-CC-CCCCCCCHHHHHHHcCCHHHHHHHHHCCCC---CCCcCCCCCCHHHHhcC
Confidence 999999999999887 77 488899999999999999999999999999 88999999999999873
No 18
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=1.8e-35 Score=223.83 Aligned_cols=163 Identities=18% Similarity=0.166 Sum_probs=117.3
Q ss_pred ccccCCCCCCHHHHHHHhcCcHHHHHHHHh----cCccCccchhhhhcccccch------------------hhhhcccc
Q 036326 53 LLQVNAKGDSRSLLNATKFGHCDIASVLIE----RAKLVEHEDEELESGVGASR------------------QTIRMTNQ 110 (225)
Q Consensus 53 ~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~----~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~ 110 (225)
.+.+|..|.|| ||+|+..|+.+++++|++ .+.+++..+ ..|.++++ ..++.++.
T Consensus 2 ~~~~d~~g~t~-L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~---~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 77 (241)
T 1k1a_A 2 ATRADEDGDTP-LHIAVVQGNLPAVHRLVNLFQQGGRELDIYN---NLRQTPLHLAVITTLPSVVRLLVTAGASPMALDR 77 (241)
T ss_dssp -----CTTCCH-HHHHHHTTCHHHHHHHHHHHHHTTCCSCCCC---TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred ccccCCCCCcH-HHHHHHcCCHHHHHHHHHHHHhcCCCCCccc---ccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCC
Confidence 34588999999 999999999999999997 677777332 23333332 11234556
Q ss_pred cCccHHHHHHHcCCHHHHHHHHhcCC----CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCcccccc-CcCCcHHH
Q 036326 111 VKHTALHQAVFHITVDVVKILTREDP----DYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVD-NWGWNFLH 185 (225)
Q Consensus 111 ~g~t~L~~A~~~g~~~~v~~Ll~~~~----~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~-~~~~t~l~ 185 (225)
.|.||||+|+..|+.+++++|++.++ +++ ..+..|.||||+|+..|+.+++++|++.+++ ++..+ ..|.||||
T Consensus 78 ~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~~g~t~L~ 155 (241)
T 1k1a_A 78 HGQTAAHLACEHRSPTCLRALLDSAAPGTLDLE-ARNYDGLTALHVAVNTECQETVQLLLERGAD-IDAVDIKSGRSPLI 155 (241)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTTCCCHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCcccccc-ccCcCCCcHHHHHHHcCCHHHHHHHHHcCCC-cccccccCCCcHHH
Confidence 67777777777777777777777765 444 5566777777777777777777777777776 66666 67788888
Q ss_pred HHHHcCCHHHHHHHHHhchhhhccccCCCCCCCcchhcc
Q 036326 186 YAVFSFEVEELRNLVDNMLASSLMNEGDAKGKSNVHFFA 224 (225)
Q Consensus 186 ~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~a~ 224 (225)
+|+..|+.+++++|+++|++ ++.+|..|.||||+|+
T Consensus 156 ~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A~ 191 (241)
T 1k1a_A 156 HAVENNSLSMVQLLLQHGAN---VNAQMYSGSSALHSAS 191 (241)
T ss_dssp HHHHTTCHHHHHHHHHTTCC---TTCBCTTSCBHHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCC---CCCcCCCCCCHHHHHH
Confidence 88888888888888888877 6777778888888775
No 19
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=1.4e-35 Score=222.71 Aligned_cols=177 Identities=21% Similarity=0.163 Sum_probs=161.0
Q ss_pred CChHHHHHHHcCCcHHHHHHHHhhCCccccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhcccccchhh
Q 036326 25 IDPNLFKATAAGNSEPFKDMAREICPSLLLQVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGASRQT 104 (225)
Q Consensus 25 ~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~ 104 (225)
|+||||.|++.|+.+++++|++.+.. .....+..|.|| ||+|+..|+.+++++|++.|++++.
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~-~~~~~~~~g~t~-L~~A~~~~~~~~v~~Ll~~~~~~~~--------------- 64 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPS-LLLQKDQDGRIP-LHWSVSFQAHEITSFLLSKMENVNL--------------- 64 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGG-GTTCCCTTSCCH-HHHHHHTTCHHHHHHHHHTCTTCCG---------------
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCcc-ccccCCCCCCCH-HHHHHHcCCHHHHHHHHhccccccc---------------
Confidence 68999999999999999999977643 345589999999 9999999999999999999955441
Q ss_pred hhc-ccccCccHHHHHHHcCCHHHHHHHHhcC--CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCccccccCcCC
Q 036326 105 IRM-TNQVKHTALHQAVFHITVDVVKILTRED--PDYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVDNWGW 181 (225)
Q Consensus 105 ~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll~~~--~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~ 181 (225)
+. ++..|.||||+|+..|+.+++++|++.| ++++ ..+..|.||||+|+..|+.+++++|+++|++ ++.++..|+
T Consensus 65 -~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~ 141 (228)
T 2dzn_A 65 -DDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLN-KITNQGVTCLHLAVGKKWFEVSQFLIENGAS-VRIKDKFNQ 141 (228)
T ss_dssp -GGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-SCCCCTTSC
T ss_pred -cccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccc-cCCcCCCCHHHHHHHcCCHhHHHHHHHcCCC-ccccCCCCC
Confidence 13 6789999999999999999999999998 7776 7788999999999999999999999999988 999999999
Q ss_pred cHHHHHHHcCCHHHHHHHHHhc-hhhhccccCCCCCCCcchhcc
Q 036326 182 NFLHYAVFSFEVEELRNLVDNM-LASSLMNEGDAKGKSNVHFFA 224 (225)
Q Consensus 182 t~l~~a~~~~~~~~~~~Ll~~g-~~~~~~~~~d~~g~tpl~~a~ 224 (225)
||||+|+..|+.+++++|+++| ++ ++.+|..|.||||+|+
T Consensus 142 t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~~d~~g~t~L~~A~ 182 (228)
T 2dzn_A 142 IPLHRAASVGSLKLIELLCGLGKSA---VNWQDKQGWTPLFHAL 182 (228)
T ss_dssp CHHHHHHHTTCHHHHHHHHTTTCCC---SCCCCTTSCCHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHhcCccc---ccCcCCCCCCHHHHHH
Confidence 9999999999999999999999 88 8999999999999987
No 20
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.9e-35 Score=228.63 Aligned_cols=174 Identities=16% Similarity=0.085 Sum_probs=148.6
Q ss_pred cCcCCCChHHHHHHHcCCcHHHHHHHHhhCCccccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhcccc
Q 036326 20 ISQSQIDPNLFKATAAGNSEPFKDMAREICPSLLLQVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVG 99 (225)
Q Consensus 20 ~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~ 99 (225)
..+..|.||||.|+..|+.+++++|++.+. .++..+..|.|| ||+|+..|+.+++++|++.|++++..+ .+.+
T Consensus 87 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga--~~~~~~~~g~t~-L~~A~~~~~~~~v~~Ll~~g~~~~~~~----~g~t 159 (285)
T 3d9h_A 87 IITADHVSPLHEACLGGHLSCVKILLKHGA--QVNGVTADWHTP-LFNACVSGSWDCVNLLLQHGASVQPES----DLAS 159 (285)
T ss_dssp EECTTCCCHHHHHHHTTCHHHHHHHHHTTC--CSSCCCTTCCCH-HHHHHHHTCHHHHHHHHHTTCCSSCSC----TTSC
T ss_pred CcCCCCCCHHHHHHHCCcHHHHHHHHHCCC--CCCCCCCCCCCH-HHHHHHcCHHHHHHHHHHCCCCCCCCC----CCCC
Confidence 346678999999999999999999998765 477789999999 999999999999999999998876332 2444
Q ss_pred cch------------------hhhhcccccCccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCcHHHHHHHcCCHHH
Q 036326 100 ASR------------------QTIRMTNQVKHTALHQAVFHITVDVVKILTREDPDYPYSANNYSKTPLCMAAEYKDARV 161 (225)
Q Consensus 100 ~~~------------------~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~g~~~~ 161 (225)
+++ ..++.++..|.||||+|+..|+.+++++|++.|++++ .+..|.||||+|+..|+.++
T Consensus 160 ~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~--~~~~g~t~L~~A~~~~~~~~ 237 (285)
T 3d9h_A 160 PIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVN--QGKGQDSPLHAVVRTASEEL 237 (285)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTT--CCBTTBCHHHHHHHTTCHHH
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCC--CCCCCCCHHHHHHHcCCHHH
Confidence 433 1235678889999999999999999999999999987 47889999999999999999
Q ss_pred HHHHHhhCCCccccccCcCCcHHHHHHHcCCHHHHHHHHHh-chh
Q 036326 162 VEAIISRNPECYELVDNWGWNFLHYAVFSFEVEELRNLVDN-MLA 205 (225)
Q Consensus 162 ~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~-g~~ 205 (225)
+++|+++|++ ++.+|..|+||||+|+ ++.+++++|+++ |++
T Consensus 238 v~~Ll~~gad-~~~~d~~g~t~l~~A~--~~~~~~~~Ll~~~~a~ 279 (285)
T 3d9h_A 238 ACLLMDFGAD-TQAKNAEGKRPVELVP--PESPLAQLFLEREGAS 279 (285)
T ss_dssp HHHHHHTTCC-TTCCCTTSCCGGGGSC--TTSHHHHHHHHHC---
T ss_pred HHHHHHCCCC-CCCcCCCCCCHHHHhc--CccHHHHHHHHhhccC
Confidence 9999999988 9999999999999999 567999999999 776
No 21
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=6.4e-36 Score=228.70 Aligned_cols=187 Identities=20% Similarity=0.182 Sum_probs=158.9
Q ss_pred CCChHHHHHHHcCCcH----HHHHHHHhhCCccccc----cCCCCCCHHHHHHHhc---CcHHHHHHHHhcCccCccchh
Q 036326 24 QIDPNLFKATAAGNSE----PFKDMAREICPSLLLQ----VNAKGDSRSLLNATKF---GHCDIASVLIERAKLVEHEDE 92 (225)
Q Consensus 24 ~~~~~L~~A~~~g~~~----~v~~Ll~~~~~~~~~~----~~~~g~t~~lh~a~~~---g~~~~~~~Ll~~~~~~~~~~~ 92 (225)
+|+||||.|++.|+.+ ++++|+..+. .++. .|..|.|| ||+|+.. |+.+++++|++.|++++..+.
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~--~i~~~~~~~d~~g~t~-L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~ 77 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSK--YLTDSAYTEGSTGKTC-LMKAVLNLQDGVNACIMPLLQIDKDSGNPKP 77 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTC--CTTSGGGSBTTTTBCH-HHHHHHTCBTTBCTTHHHHHHHHHHTTCSSC
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCC--CcccccccCCCCCCCH-HHHHHHccccchHHHHHHHHhcCCcccchhh
Confidence 4789999999999997 4556655665 4666 79999999 9999999 999999999999987762210
Q ss_pred hhhcccccchhhhhcccccCccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCC-------------CCcHHHHHHHcCCH
Q 036326 93 ELESGVGASRQTIRMTNQVKHTALHQAVFHITVDVVKILTREDPDYPYSANNY-------------SKTPLCMAAEYKDA 159 (225)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~-------------~~t~l~~a~~~g~~ 159 (225)
.. ......++..|.||||+|+..|+.+++++|++.|++++ ..+.. |.||||+|+..|+.
T Consensus 78 ~~-------~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~ 149 (256)
T 2etb_A 78 LV-------NAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVH-LRACGRFFQKHQGTCFYFGELPLSLAACTKQW 149 (256)
T ss_dssp GG-------GCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCH
T ss_pred hc-------ccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCC-cccccccccccccccccCCCCHHHHHHHcCCH
Confidence 00 00011234679999999999999999999999999987 55554 99999999999999
Q ss_pred HHHHHHHh---hCCCccccccCcCCcHHHHHHH--cCCHH-------HHHHHHHhchhhhcc-------ccCCCCCCCcc
Q 036326 160 RVVEAIIS---RNPECYELVDNWGWNFLHYAVF--SFEVE-------ELRNLVDNMLASSLM-------NEGDAKGKSNV 220 (225)
Q Consensus 160 ~~~~~Ll~---~~~~~~~~~~~~~~t~l~~a~~--~~~~~-------~~~~Ll~~g~~~~~~-------~~~d~~g~tpl 220 (225)
+++++|++ .|++ ++.+|..|+||||+|+. .++.+ ++++|+++|++ + +.+|..|+|||
T Consensus 150 ~~v~~Ll~~~~~ga~-~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~---~~~~~~~~~~~d~~g~tpL 225 (256)
T 2etb_A 150 DVVTYLLENPHQPAS-LEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGAR---LCPTVQLEEISNHQGLTPL 225 (256)
T ss_dssp HHHHHHHHCSSCCCC-TTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHH---HSTTCCGGGCCCTTSCCHH
T ss_pred HHHHHHHhccccCCC-cCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCC---cccccccccccCCCCCCHH
Confidence 99999999 8887 99999999999999999 78888 99999999999 6 88999999999
Q ss_pred hhccC
Q 036326 221 HFFAA 225 (225)
Q Consensus 221 ~~a~~ 225 (225)
|+|++
T Consensus 226 ~~A~~ 230 (256)
T 2etb_A 226 KLAAK 230 (256)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99973
No 22
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=3.1e-35 Score=221.42 Aligned_cols=177 Identities=18% Similarity=0.173 Sum_probs=166.1
Q ss_pred CCCChHHHHHHHcCCcHHHHHHHHhhCCccccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhcccccch
Q 036326 23 SQIDPNLFKATAAGNSEPFKDMAREICPSLLLQVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGASR 102 (225)
Q Consensus 23 ~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~ 102 (225)
..+++|||.|+..|+.+.+++++.... ...+..+..|.|| ||+|+..|+.+++++|++.|++++
T Consensus 4 ~~~~~~l~~A~~~g~~~~v~~ll~~~~-~~~~~~~~~g~t~-L~~A~~~g~~~~v~~Ll~~g~~~~-------------- 67 (231)
T 3aji_A 4 CVSNIMICNLAYSGKLDELKERILADK-SLATRTDQDSRTA-LHWACSAGHTEIVEFLLQLGVPVN-------------- 67 (231)
T ss_dssp CCSSSHHHHHHHHTCHHHHHHHHHHCG-GGGGCCCTTSCCH-HHHHHHHTCHHHHHHHHHTTCCSC--------------
T ss_pred ccccchHHHHHHhCCHHHHHHHHHhch-hhhhcCCCCCCCH-HHHHHHcCcHHHHHHHHHhCCCCC--------------
Confidence 457789999999999999999997653 3477789999999 999999999999999999999998
Q ss_pred hhhhcccccCccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCccccccCcCCc
Q 036326 103 QTIRMTNQVKHTALHQAVFHITVDVVKILTREDPDYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVDNWGWN 182 (225)
Q Consensus 103 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~t 182 (225)
.++..|.||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+..|+.+++++|++++++ ++.++..|.|
T Consensus 68 ----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t 141 (231)
T 3aji_A 68 ----DKDDAGWSPLHIAASAGXDEIVKALLVKGAHVN-AVNQNGCTPLHYAASKNRHEIAVMLLEGGAN-PDAKDHYDAT 141 (231)
T ss_dssp ----CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCC
T ss_pred ----CcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCc
Confidence 788899999999999999999999999999987 7888999999999999999999999999988 9999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHhchhhhccccCCCCCCCcchhcc
Q 036326 183 FLHYAVFSFEVEELRNLVDNMLASSLMNEGDAKGKSNVHFFA 224 (225)
Q Consensus 183 ~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~a~ 224 (225)
|||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+
T Consensus 142 ~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A~ 180 (231)
T 3aji_A 142 AMHRAAAKGNLKMVHILLFYKAS---TNIQDTEGNTPLHLAC 180 (231)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCC---SCCCCTTSCCHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHhcCCC---ccccCCCCCCHHHHHH
Confidence 99999999999999999999999 8899999999999986
No 23
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=1.6e-35 Score=230.06 Aligned_cols=181 Identities=16% Similarity=0.090 Sum_probs=163.1
Q ss_pred ccCCcccCcCCCChHHHHHHHcCCcHHHHHHHHhhCCccccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhh
Q 036326 14 LDNNGEISQSQIDPNLFKATAAGNSEPFKDMAREICPSLLLQVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEE 93 (225)
Q Consensus 14 ~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~ 93 (225)
...+....+..|.||||.|+..|+.+++++|++.+. .++.. +|.|| ||+|+..|+.+++++|+++|++++
T Consensus 20 ~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~--~~~~~--~g~t~-L~~A~~~g~~~~v~~Ll~~ga~~~----- 89 (285)
T 3kea_A 20 SSKDTFKADVHGHSASYYAIADNNVRLVCTLLNAGA--LKNLL--ENEFP-LHQAATLEDTKIVKILLFSGLDDS----- 89 (285)
T ss_dssp HSTTTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTG--GGSCC--TTCCH-HHHHTTSSSCHHHHHHHHTTCCTT-----
T ss_pred HhCCCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCC--CCCCC--CCCCH-HHHHHHcCCHHHHHHHHHCCCCCC-----
Confidence 344555667789999999999999999999998865 34444 58999 999999999999999999999998
Q ss_pred hhcccccchhhhhcccccCccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCC-CcHHHHHHHcCCHHHHHHHHhhCCCc
Q 036326 94 LESGVGASRQTIRMTNQVKHTALHQAVFHITVDVVKILTREDPDYPYSANNYS-KTPLCMAAEYKDARVVEAIISRNPEC 172 (225)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~-~t~l~~a~~~g~~~~~~~Ll~~~~~~ 172 (225)
.++..|.||||+|+..|+.+++++|++.|++++ ..+..| .||||+|+..|+.+++++|+++++.
T Consensus 90 -------------~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~- 154 (285)
T 3kea_A 90 -------------QFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLM-FYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPS- 154 (285)
T ss_dssp -------------CCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGG-GCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCT-
T ss_pred -------------CcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCC-ccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCc-
Confidence 788999999999999999999999999999987 777788 7999999999999999999999876
Q ss_pred cccccC-cCCcHHHHHHHcCCHHHHHHHHHhchhhhccccCCCCCCCc-chhcc
Q 036326 173 YELVDN-WGWNFLHYAVFSFEVEELRNLVDNMLASSLMNEGDAKGKSN-VHFFA 224 (225)
Q Consensus 173 ~~~~~~-~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tp-l~~a~ 224 (225)
. .+. .|.||||+|+..|+.+++++|+++|++ ++.+|..|+|| ||+|+
T Consensus 155 ~--~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad---~n~~~~~g~t~~L~~A~ 203 (285)
T 3kea_A 155 T--FDLAILLSCIHITIKNGHVDMMILLLDYMTS---TNTNNSLLFIPDIKLAI 203 (285)
T ss_dssp T--CCCSTHHHHHHHHHHTTCHHHHHHHHHHHHH---TCTTCCCBCCTTHHHHH
T ss_pred c--ccccCCccHHHHHHHcChHHHHHHHHHcCCC---CCcccCCCCChHHHHHH
Confidence 3 233 899999999999999999999999999 89999999998 99986
No 24
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=1.2e-35 Score=238.14 Aligned_cols=192 Identities=18% Similarity=0.192 Sum_probs=165.4
Q ss_pred cCCCChHHHHHHHcCCcHHHHHHHHhhCCccccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhcccccc
Q 036326 22 QSQIDPNLFKATAAGNSEPFKDMAREICPSLLLQVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGAS 101 (225)
Q Consensus 22 ~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~ 101 (225)
+..|.||||.|+..|+.+++++|++.+. +++..|..|.|| ||+|+..|+.+++++|++.|++++.. .+.+++
T Consensus 17 d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~--~~~~~d~~g~t~-L~~A~~~g~~~~v~~Ll~~g~~~~~~-----~g~t~L 88 (364)
T 3ljn_A 17 DDENMEKIHVAARKGQTDEVRRLIETGV--SPTIQNRFGCTA-LHLACKFGCVDTAKYLASVGEVHSLW-----HGQKPI 88 (364)
T ss_dssp CHHHHHHHHHHHHHTCHHHHHHHHHTTC--CTTCCCTTCCCH-HHHHHHHCCHHHHHHHHHHCCCCCCB-----TTBCHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCC--CccccCCCCCcH-HHHHHHcCCHHHHHHHHHCCCCcccc-----CCCCHH
Confidence 4457889999999999999999987765 467788889999 99999999999999999988866532 233333
Q ss_pred h------------hhhhc---------------------------ccccCccHHHHHHHcC--CHHHHHHHHhcCCCCCC
Q 036326 102 R------------QTIRM---------------------------TNQVKHTALHQAVFHI--TVDVVKILTREDPDYPY 140 (225)
Q Consensus 102 ~------------~~~~~---------------------------~~~~g~t~L~~A~~~g--~~~~v~~Ll~~~~~~~~ 140 (225)
+ .++.. ++..|.||||+|+..| +.+++++|++.|++++
T Consensus 89 ~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~- 167 (364)
T 3ljn_A 89 HLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPT- 167 (364)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTT-
T ss_pred HHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCc-
Confidence 2 22222 7778999999999999 9999999999999988
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCc----cccccCcCCcHHHHHHHcCCHHHHHHHHHhchhhhccccCCCCC
Q 036326 141 SANNYSKTPLCMAAEYKDARVVEAIISRNPEC----YELVDNWGWNFLHYAVFSFEVEELRNLVDNMLASSLMNEGDAKG 216 (225)
Q Consensus 141 ~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~----~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g 216 (225)
..+..|.||||+|+..|+.+++++|++++++. ++.++..|+||||+|+..|+.+++++|+++|++ ++.+|..|
T Consensus 168 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad---~~~~d~~g 244 (364)
T 3ljn_A 168 AKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGID---VNMEDNEH 244 (364)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCC---TTCCCTTS
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC---CCCCCCCC
Confidence 78889999999999999999999999988753 788899999999999999999999999999999 89999999
Q ss_pred CCcchhccC
Q 036326 217 KSNVHFFAA 225 (225)
Q Consensus 217 ~tpl~~a~~ 225 (225)
+||||+|++
T Consensus 245 ~tpL~~A~~ 253 (364)
T 3ljn_A 245 TVPLYLSVR 253 (364)
T ss_dssp CCHHHHHHH
T ss_pred CCHHHHHHH
Confidence 999999973
No 25
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=100.00 E-value=1.3e-34 Score=208.63 Aligned_cols=170 Identities=19% Similarity=0.213 Sum_probs=152.4
Q ss_pred CChHHHHHHHcCCcHHHHHHHHhhCCccccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhcccccchhh
Q 036326 25 IDPNLFKATAAGNSEPFKDMAREICPSLLLQVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGASRQT 104 (225)
Q Consensus 25 ~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~ 104 (225)
+.+|||.|+..|+.+.+++|+..+. ..++..+..|.|| ||+|+..|+.+++++|++.|++++
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~-~~~~~~~~~g~t~-L~~A~~~~~~~~v~~Ll~~g~~~~---------------- 63 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGD-NLVNKPDERGFTP-LIWASAFGEIETVRFLLEWGADPH---------------- 63 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCS-GGGGCCCTTSCCH-HHHHHHTTCHHHHHHHHHHTCCTT----------------
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCc-ccccCCCCCCCCH-HHHHHHcCCHHHHHHHHHcCCCch----------------
Confidence 4578999999999999999997654 3477889999999 999999999999999999999998
Q ss_pred hhcccccCccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCccccccCcCCcHH
Q 036326 105 IRMTNQVKHTALHQAVFHITVDVVKILTREDPDYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVDNWGWNFL 184 (225)
Q Consensus 105 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~t~l 184 (225)
.++..|.||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+..|+.+++++|+++|++ ++.++..|.|||
T Consensus 64 --~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l 139 (172)
T 3v30_A 64 --ILAKERESALSLASTGGYTDIVGLLLERDVDIN-IYDWNGGTPLLYAVRGNHVKCVEALLARGAD-LTTEADSGYTPM 139 (172)
T ss_dssp --CCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHH
T ss_pred --hhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccCCCCCCHH
Confidence 788899999999999999999999999999988 7888999999999999999999999999988 999999999999
Q ss_pred HHHHHcCCHHHHHHHHHhchhhhccccCCCCCCCc
Q 036326 185 HYAVFSFEVEELRNLVDNMLASSLMNEGDAKGKSN 219 (225)
Q Consensus 185 ~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tp 219 (225)
|+|+..|+.+++++|+++|++ ...++..|.||
T Consensus 140 ~~A~~~~~~~~~~~L~~~~~~---~~~~~~~~~~p 171 (172)
T 3v30_A 140 DLAVALGYRKVQQVIENHILK---LFQSNLVPADP 171 (172)
T ss_dssp HHHHHHTCHHHHHHHHHHHHH---HSCC-------
T ss_pred HHHHHhCcHHHHHHHHHHHHH---HhcccCCCCCC
Confidence 999999999999999999999 77777788887
No 26
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=2.8e-34 Score=228.36 Aligned_cols=194 Identities=20% Similarity=0.183 Sum_probs=151.5
Q ss_pred cCcCCCChHHHHHHHcCCcHHHHHHHHhhCCccccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhcccc
Q 036326 20 ISQSQIDPNLFKATAAGNSEPFKDMAREICPSLLLQVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVG 99 (225)
Q Consensus 20 ~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~ 99 (225)
..+..|.||||.|+..|+.+++++|++.+. .++..+..|.|| ||+|+..|+.+++++|+++|++++..+ ..+.+
T Consensus 53 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~--~~~~~~~~g~t~-L~~A~~~g~~~iv~~Ll~~g~~~~~~~---~~g~t 126 (351)
T 3utm_A 53 ASDGRKSTPLHLAAGYNRVRIVQLLLQHGA--DVHAKDKGGLVP-LHNACSYGHYEVTELLLKHGACVNAMD---LWQFT 126 (351)
T ss_dssp CSSTTCCCHHHHHHHTTCHHHHHHHHHTTC--CTTCCCTTCCCH-HHHHHHTTCHHHHHHHHHTTCCTTCCC---TTCCC
T ss_pred cCCCCCCCHHHHHHHcCCHHHHHHHHHcCC--CCCccCCCCCcH-HHHHHHCCCHHHHHHHHHCCCCCCCCC---CCCCC
Confidence 345678999999999999999999998876 477789999999 999999999999999999999888332 22333
Q ss_pred cch------------hhhh------------------------------------------------------------c
Q 036326 100 ASR------------QTIR------------------------------------------------------------M 107 (225)
Q Consensus 100 ~~~------------~~~~------------------------------------------------------------~ 107 (225)
+++ .++. .
T Consensus 127 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 206 (351)
T 3utm_A 127 PLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFK 206 (351)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhccccc
Confidence 332 1111 1
Q ss_pred ccccCccHHHHHHHc---CCHHHHHHHHhcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCccccccCcCCcHH
Q 036326 108 TNQVKHTALHQAVFH---ITVDVVKILTREDPDYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVDNWGWNFL 184 (225)
Q Consensus 108 ~~~~g~t~L~~A~~~---g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~t~l 184 (225)
.+..|.||||+|+.. +..+++++|++.|.+++ ..+..|.||||+|+..|+.+++++|+++|++ ++.++..|+|||
T Consensus 207 ~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~n~~d~~g~t~L 284 (351)
T 3utm_A 207 QPQSHETALHCAVASLHPKRKQVAELLLRKGANVN-EKNKDFMTPLHVAAERAHNDVMEVLHKHGAK-MNALDSLGQTAL 284 (351)
T ss_dssp CTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHH
T ss_pred CCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcC-CcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHH
Confidence 123455677777766 34567777777777766 6677888888888888888888888888877 888888888888
Q ss_pred HHHHHcCCHHHHHHHHHhchhhhccccCCCCCCCcchhcc
Q 036326 185 HYAVFSFEVEELRNLVDNMLASSLMNEGDAKGKSNVHFFA 224 (225)
Q Consensus 185 ~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~a~ 224 (225)
|+|+..|+.+++++|+++|++ ++.+|..|+||+++|.
T Consensus 285 ~~A~~~~~~~~v~~Ll~~gad---~~~~~~~g~tal~~a~ 321 (351)
T 3utm_A 285 HRAALAGHLQTCRLLLSYGSD---PSIISLQGFTAAQMGN 321 (351)
T ss_dssp HHHHHHTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHSC
T ss_pred HHHHHcCcHHHHHHHHHcCCC---CCCcCCCCCChhhhhh
Confidence 888888888888888888888 7777888888888774
No 27
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=3.1e-35 Score=226.97 Aligned_cols=198 Identities=18% Similarity=0.202 Sum_probs=159.2
Q ss_pred cccCcCCCChHHHHHHHcCCcHHHHHHHHhhC--Ccccc----ccCCCCCCHHHHHHHhc---CcHHHHHHHHhcCccCc
Q 036326 18 GEISQSQIDPNLFKATAAGNSEPFKDMAREIC--PSLLL----QVNAKGDSRSLLNATKF---GHCDIASVLIERAKLVE 88 (225)
Q Consensus 18 ~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~--~~~~~----~~~~~g~t~~lh~a~~~---g~~~~~~~Ll~~~~~~~ 88 (225)
.+..+..|+||||.|++.|+.++++.|++.+. ...++ ..+..|.|| ||+|+.. |+.+++++|++.|++++
T Consensus 6 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tp-L~~A~~~~~~g~~~~v~~Ll~~ga~~~ 84 (273)
T 2pnn_A 6 EKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTC-LLKAMLNLHNGQNDTIALLLDVARKTD 84 (273)
T ss_dssp -----CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCH-HHHHHHSCBTTBCHHHHHHHHHHHHTT
T ss_pred CCCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCH-HHHHHHHHhcCChHHHHHHHHhhcccc
Confidence 34456779999999999999999999986532 11222 357899999 9999986 99999999999987654
Q ss_pred cchhhhhcccccchhhhhcccccCccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCC--------------CCCcHHHHHH
Q 036326 89 HEDEELESGVGASRQTIRMTNQVKHTALHQAVFHITVDVVKILTREDPDYPYSANN--------------YSKTPLCMAA 154 (225)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~--------------~~~t~l~~a~ 154 (225)
....... .....++..|.||||+|+..|+.+++++|++.|++++ ..+. .|.||||+|+
T Consensus 85 ~~~~~i~-------~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~-~~~~~~~~~~~~~~~~~~~g~tpL~~A~ 156 (273)
T 2pnn_A 85 SLKQFVN-------ASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQ-AAANGDFFKKTKGRPGFYFGELPLSLAA 156 (273)
T ss_dssp CHHHHHT-------CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCBCSGGGSSCSSSCCCCSCBSHHHHHH
T ss_pred chhHHhh-------cccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcC-ccccccccccccccccccCCCCHHHHHH
Confidence 2110000 0001256689999999999999999999999999987 5554 7999999999
Q ss_pred HcCCHHHHHHHHh---hCCCccccccCcCCcHHHHHHHcCC---------HHHHHHHHHhchhhhc----cccCCCCCCC
Q 036326 155 EYKDARVVEAIIS---RNPECYELVDNWGWNFLHYAVFSFE---------VEELRNLVDNMLASSL----MNEGDAKGKS 218 (225)
Q Consensus 155 ~~g~~~~~~~Ll~---~~~~~~~~~~~~~~t~l~~a~~~~~---------~~~~~~Ll~~g~~~~~----~~~~d~~g~t 218 (225)
..|+.+++++|++ .|++ ++.++..|+||||+|+..|+ .+++++|+++|++++. ++.+|..|+|
T Consensus 157 ~~g~~~~v~~Ll~~~~~gad-~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~T 235 (273)
T 2pnn_A 157 CTNQLAIVKFLLQNSWQPAD-ISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLT 235 (273)
T ss_dssp HTTCHHHHHHHHHCSSCCCC-TTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCC
T ss_pred HcCCHHHHHHHHhcccCCCC-ceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCC
Confidence 9999999999999 8887 99999999999999999998 8999999999999321 1358999999
Q ss_pred cchhccC
Q 036326 219 NVHFFAA 225 (225)
Q Consensus 219 pl~~a~~ 225 (225)
|||+|++
T Consensus 236 pL~~A~~ 242 (273)
T 2pnn_A 236 PLALAAS 242 (273)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999973
No 28
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=100.00 E-value=1.6e-34 Score=221.38 Aligned_cols=192 Identities=19% Similarity=0.187 Sum_probs=157.5
Q ss_pred cCCCChHHHHHHHcCCcHHHHHHHH----hhCCccccccC----CCCCCHHHHHHH---hcCcHHHHHHHHhcCccCccc
Q 036326 22 QSQIDPNLFKATAAGNSEPFKDMAR----EICPSLLLQVN----AKGDSRSLLNAT---KFGHCDIASVLIERAKLVEHE 90 (225)
Q Consensus 22 ~~~~~~~L~~A~~~g~~~~v~~Ll~----~~~~~~~~~~~----~~g~t~~lh~a~---~~g~~~~~~~Ll~~~~~~~~~ 90 (225)
+++++++||.|++.|+.+.++.|+. .+.. ++..+ ..|.|| ||+|+ ..|+.+++++|++.|+++...
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~--~~~~~~~~~~~g~t~-L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~ 78 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHKKR--LTDEEFREPSTGKTC-LPKALLNLSAGRNDTIPILLDIAEKTGNM 78 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCC--TTSGGGSCTTTCCCH-HHHHHTSCBTTBCTHHHHHHHHHHHTTCH
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhcCCC--cchhhhhccCCCCcH-HHHHHHHhhcCCHHHHHHHHHhcccccch
Confidence 3568899999999999997666654 5543 44333 779999 99999 679999999999998764421
Q ss_pred hhhhhcccccchhhhhcccccCccHHHHHHHcCCHHHHHHHHhcCCCCCCCCC--------------CCCCcHHHHHHHc
Q 036326 91 DEELESGVGASRQTIRMTNQVKHTALHQAVFHITVDVVKILTREDPDYPYSAN--------------NYSKTPLCMAAEY 156 (225)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~--------------~~~~t~l~~a~~~ 156 (225)
..- +...++..+..|.||||+|+..|+.+++++|++.|++++ ..+ ..|.||||+|+..
T Consensus 79 ~~~-------~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~ 150 (260)
T 3jxi_A 79 REF-------INSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVH-AQARGRFFQPKDEGGYFYFGELPLSLAACT 150 (260)
T ss_dssp HHH-------HTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCEECCCSSSCCCCSCCSCSSHHHHHHHT
T ss_pred Hhh-------hcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcC-ccccccccCcccccccccCCCCHHHHHHHc
Confidence 100 001112455689999999999999999999999999988 555 5799999999999
Q ss_pred CCHHHHHHHHh---hCCCccccccCcCCcHHHHHHHcCC---------HHHHHHHHHhchhhhc----cccCCCCCCCcc
Q 036326 157 KDARVVEAIIS---RNPECYELVDNWGWNFLHYAVFSFE---------VEELRNLVDNMLASSL----MNEGDAKGKSNV 220 (225)
Q Consensus 157 g~~~~~~~Ll~---~~~~~~~~~~~~~~t~l~~a~~~~~---------~~~~~~Ll~~g~~~~~----~~~~d~~g~tpl 220 (225)
|+.+++++|++ .|++ ++.+|..|+||||+|+..++ .+++++|+++|++++. .+.+|..|+|||
T Consensus 151 g~~~~v~~Ll~~~~~ga~-~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL 229 (260)
T 3jxi_A 151 NQPHIVHYLTENGHKQAD-LRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPL 229 (260)
T ss_dssp TCHHHHHHHHHCSSCCCC-TTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHH
T ss_pred CCHHHHHHHHhccccCCC-CcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHH
Confidence 99999999999 8887 99999999999999999888 7999999999999210 167899999999
Q ss_pred hhccC
Q 036326 221 HFFAA 225 (225)
Q Consensus 221 ~~a~~ 225 (225)
|+|++
T Consensus 230 ~~A~~ 234 (260)
T 3jxi_A 230 MMAAK 234 (260)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99973
No 29
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=5.8e-34 Score=233.47 Aligned_cols=192 Identities=18% Similarity=0.157 Sum_probs=151.5
Q ss_pred cCCCChHHHHHHHcCCcHHHHHHHHhhCCccccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhcccccc
Q 036326 22 QSQIDPNLFKATAAGNSEPFKDMAREICPSLLLQVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGAS 101 (225)
Q Consensus 22 ~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~ 101 (225)
...|.||||.|+..|+.+++++|+..+.. .+..+..|.|| ||+|+..|+.+++++|++.|.+++..+ ..+.+++
T Consensus 176 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~--~~~~~~~g~t~-L~~A~~~~~~~~~~~Ll~~g~~~~~~~---~~g~t~L 249 (437)
T 1n11_A 176 GKNGLTPLHVAVHHNNLDIVKLLLPRGGS--PHSPAWNGYTP-LHIAAKQNQVEVARSLLQYGGSANAES---VQGVTPL 249 (437)
T ss_dssp CSSCCCHHHHHHHTTCHHHHHHHGGGTCC--SCCCCTTCCCH-HHHHHHTTCHHHHHHHHHTTCCTTCCC---TTCCCHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhCCCC--CCCcCCCCCCH-HHHHHHcCCHHHHHHHHHcCCCCCCCC---CCCCCHH
Confidence 44566777777777777777777766542 44556666777 777777777777777777766665332 2223332
Q ss_pred h------------hh------hhcccccCccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCcHHHHHHHcCCHHHHH
Q 036326 102 R------------QT------IRMTNQVKHTALHQAVFHITVDVVKILTREDPDYPYSANNYSKTPLCMAAEYKDARVVE 163 (225)
Q Consensus 102 ~------------~~------~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~ 163 (225)
+ .+ ++.++..|.||||+|+..|+.+++++|++.|.+++ ..+..|.||||+|+..|+.++++
T Consensus 250 ~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~L~~A~~~g~~~~v~ 328 (437)
T 1n11_A 250 HLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVD-ATTRMGYTPLHVASHYGNIKLVK 328 (437)
T ss_dssp HHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTT-CCCSSCCCHHHHHHHSSCSHHHH
T ss_pred HHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCC-CCCCCCCCHHHHHHHcCcHHHHH
Confidence 2 11 23667789999999999999999999999999987 78889999999999999999999
Q ss_pred HHHhhCCCccccccCcCCcHHHHHHHcCCHHHHHHHHHhchhhhccccCCCCCCCcchhcc
Q 036326 164 AIISRNPECYELVDNWGWNFLHYAVFSFEVEELRNLVDNMLASSLMNEGDAKGKSNVHFFA 224 (225)
Q Consensus 164 ~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~a~ 224 (225)
+|+++|++ ++.++..|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||+++|+
T Consensus 329 ~Ll~~gad-~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~---~~~~~~~g~t~l~~A~ 385 (437)
T 1n11_A 329 FLLQHQAD-VNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGAS---PNEVSSDGTTPLAIAK 385 (437)
T ss_dssp HHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---SCCCCSSSCCHHHHHH
T ss_pred HHHhcCCC-CCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCC---CCCCCCCCCCHHHHHH
Confidence 99999987 999999999999999999999999999999999 7888889999999886
No 30
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=2.7e-34 Score=231.22 Aligned_cols=181 Identities=15% Similarity=0.108 Sum_probs=165.6
Q ss_pred cCcCCCChHHHHHHHcCCcHHHHHHHHhhCCccccccCCCCCCHHHHHHHhcCcHHHHHHHHhcC---ccCccchhhhhc
Q 036326 20 ISQSQIDPNLFKATAAGNSEPFKDMAREICPSLLLQVNAKGDSRSLLNATKFGHCDIASVLIERA---KLVEHEDEELES 96 (225)
Q Consensus 20 ~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~---~~~~~~~~~~~~ 96 (225)
..+..|.||||.|+..|+.+++++|++.+. +++..+..|.|| ||+|+..|+.+++++|++.+ .+++
T Consensus 161 ~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga--~~~~~~~~g~t~-L~~A~~~g~~~~v~~Ll~~~~~~~~~~-------- 229 (373)
T 2fo1_E 161 AMDCDENTPLMLAVLARRRRLVAYLMKAGA--DPTIYNKSERSA-LHQAAANRDFGMMVYMLNSTKLKGDIE-------- 229 (373)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHTTC--CSCCCCTTCCCH-HHHHHHTTCHHHHHHHTTSHHHHHTTS--------
T ss_pred CCCCCCCCHHHHHHHcChHHHHHHHHHCCC--CCcccCCCCCCH-HHHHHHCCCHHHHHHHHhcCccccChh--------
Confidence 345679999999999999999999998876 467799999999 99999999999999999987 6777
Q ss_pred ccccchhhhhcccccCccHHHHHHHcC---CHHHHHHHHhcCCCCCC-------CCCCCCCcHHHHHHHcCCHHHHHHHH
Q 036326 97 GVGASRQTIRMTNQVKHTALHQAVFHI---TVDVVKILTREDPDYPY-------SANNYSKTPLCMAAEYKDARVVEAII 166 (225)
Q Consensus 97 ~~~~~~~~~~~~~~~g~t~L~~A~~~g---~~~~v~~Ll~~~~~~~~-------~~~~~~~t~l~~a~~~g~~~~~~~Ll 166 (225)
..+..|.||||+|+..+ +.+++++|++.|++++. ..+..|.||||+|+..|+.+++++|+
T Consensus 230 ----------~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll 299 (373)
T 2fo1_E 230 ----------ELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLV 299 (373)
T ss_dssp ----------CCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHH
T ss_pred ----------hcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHH
Confidence 77899999999999998 89999999999998762 24668999999999999999999999
Q ss_pred hhCCCccccccCcCCcHHHHHHHcCCHHHHHHHHHhchhhhccccCCCCCCCcchhcc
Q 036326 167 SRNPECYELVDNWGWNFLHYAVFSFEVEELRNLVDNMLASSLMNEGDAKGKSNVHFFA 224 (225)
Q Consensus 167 ~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~a~ 224 (225)
+.++.+++.++..|+||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+
T Consensus 300 ~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad---~~~~d~~g~t~l~~A~ 354 (373)
T 2fo1_E 300 GEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGAS---VEAVDATDHTARQLAQ 354 (373)
T ss_dssp HHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC---SSCCCSSSCCHHHHHH
T ss_pred HhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---ccCCCCCCCCHHHHHH
Confidence 987445999999999999999999999999999999999 8999999999999986
No 31
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.3e-33 Score=218.18 Aligned_cols=192 Identities=18% Similarity=0.186 Sum_probs=155.8
Q ss_pred cCCCChHHHHHHHcCCcHHHHHHHHhhCCccccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhcccccc
Q 036326 22 QSQIDPNLFKATAAGNSEPFKDMAREICPSLLLQVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGAS 101 (225)
Q Consensus 22 ~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~ 101 (225)
...|.||||.|+..|+.+++++|++.+. .++..+..|.|| ||+|+..|+.+++++|+++|++++..+ ..+.+++
T Consensus 36 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~--~~~~~~~~g~t~-L~~A~~~~~~~~v~~Ll~~g~~~~~~~---~~g~t~L 109 (285)
T 1wdy_A 36 EEGGWTPLHNAVQMSREDIVELLLRHGA--DPVLRKKNGATP-FLLAAIAGSVKLLKLFLSKGADVNECD---FYGFTAF 109 (285)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTTC--CTTCCCTTCCCH-HHHHHHHTCHHHHHHHHHTTCCTTCBC---TTCCBHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCC--CCcccCCCCCCH-HHHHHHcCCHHHHHHHHHcCCCCCccC---cccCCHH
Confidence 4567899999999999999999998766 466788889999 999999999999999999988887443 2233333
Q ss_pred h------------hhh------hcc----------cccCccHHHHHHHcCCHHHHHHHHhc-CCCCCCCCCCCCCcHHHH
Q 036326 102 R------------QTI------RMT----------NQVKHTALHQAVFHITVDVVKILTRE-DPDYPYSANNYSKTPLCM 152 (225)
Q Consensus 102 ~------------~~~------~~~----------~~~g~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~~~t~l~~ 152 (225)
+ .++ +.+ +..|.||||+|+..|+.+++++|++. |.+++ ..+..|.||||+
T Consensus 110 ~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~-~~~~~g~t~l~~ 188 (285)
T 1wdy_A 110 MEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVN-ACDNMGRNALIH 188 (285)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTT-CCCTTSCCHHHH
T ss_pred HHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCC-ccCCCCCCHHHH
Confidence 2 111 111 56678889999988888888888887 77776 677888899999
Q ss_pred HHHcCC----HHHHHHHHhhCCCccccccCcCCcHHHHHHHcCCHHHHHHHHH-hchhhhccccCCCCCCCcchhcc
Q 036326 153 AAEYKD----ARVVEAIISRNPECYELVDNWGWNFLHYAVFSFEVEELRNLVD-NMLASSLMNEGDAKGKSNVHFFA 224 (225)
Q Consensus 153 a~~~g~----~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~-~g~~~~~~~~~d~~g~tpl~~a~ 224 (225)
|+..++ .+++++|+++|++ ++.++..|.||||+|+..|+.+++++|++ .|++ ++.+|..|+||||+|+
T Consensus 189 a~~~~~~~~~~~i~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~---~~~~~~~g~t~l~~A~ 261 (285)
T 1wdy_A 189 ALLSSDDSDVEAITHLLLDHGAD-VNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIE---INDTDSDGKTALLLAV 261 (285)
T ss_dssp HHHCSCTTTHHHHHHHHHHTTCC-SSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCC---TTCCCTTSCCHHHHHH
T ss_pred HHHccccchHHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCC---ccccCCCCCcHHHHHH
Confidence 988888 8888899888887 88888889999999999999999999998 7888 7888889999999886
No 32
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=100.00 E-value=7.3e-34 Score=202.68 Aligned_cols=159 Identities=19% Similarity=0.166 Sum_probs=147.8
Q ss_pred CCChHHHHHHHcCCcHHHHHHHHhhCCccccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhcccccchh
Q 036326 24 QIDPNLFKATAAGNSEPFKDMAREICPSLLLQVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGASRQ 103 (225)
Q Consensus 24 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~ 103 (225)
...+|||.|+..|+.+++++|++.+. .++..+..|.|| ||+|+. |+.+++++|++.|++++
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~--~~~~~~~~g~t~-L~~A~~-~~~~~v~~Ll~~g~~~~--------------- 64 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNV--NVNAQNGFGRTA-LQVMKL-GNPEIARRLLLRGANPD--------------- 64 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCC--CTTCCCTTSCCH-HHHCCS-SCHHHHHHHHHTTCCTT---------------
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCC--CccccCccCccH-HHHHHc-CcHHHHHHHHHcCCCCC---------------
Confidence 35689999999999999999997665 577889999999 999999 99999999999999998
Q ss_pred hhhcccccCccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCccccccCcCCcH
Q 036326 104 TIRMTNQVKHTALHQAVFHITVDVVKILTREDPDYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVDNWGWNF 183 (225)
Q Consensus 104 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~t~ 183 (225)
.++..|.||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+..|+.+++++|+++++..++.++..|.||
T Consensus 65 ---~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~ 140 (162)
T 1ihb_A 65 ---LKDRTGFAVIHDAARAGFLDTLQTLLEFQADVN-IEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTA 140 (162)
T ss_dssp ---CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCH
T ss_pred ---CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcH
Confidence 788999999999999999999999999999988 7888999999999999999999999999998679999999999
Q ss_pred HHHHHHcCCHHHHHHHHHhchh
Q 036326 184 LHYAVFSFEVEELRNLVDNMLA 205 (225)
Q Consensus 184 l~~a~~~~~~~~~~~Ll~~g~~ 205 (225)
||+|+..|+.+++++|+++|||
T Consensus 141 l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 141 CDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp HHHHHHTTCHHHHHHHHHTC--
T ss_pred HHHHHHcCCHHHHHHHHHhCCC
Confidence 9999999999999999999986
No 33
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=2.3e-33 Score=216.85 Aligned_cols=186 Identities=18% Similarity=0.178 Sum_probs=161.0
Q ss_pred cCcCCCChHHHHHHHcCCcHHHHHHHHhhCCccccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhh------
Q 036326 20 ISQSQIDPNLFKATAAGNSEPFKDMAREICPSLLLQVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEE------ 93 (225)
Q Consensus 20 ~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~------ 93 (225)
..+..|.||||.|+..|+.+++++|++.+. .++..+..|.|| ||+|+..|+.+++++|++.|++++..+..
T Consensus 67 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~--~~~~~~~~g~t~-L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~ 143 (285)
T 1wdy_A 67 LRKKNGATPFLLAAIAGSVKLLKLFLSKGA--DVNECDFYGFTA-FMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQER 143 (285)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTC--CTTCBCTTCCBH-HHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCC--CCCccCcccCCH-HHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHh
Confidence 345678999999999999999999998876 477789999999 99999999999999999999988754211
Q ss_pred -hhcccccch------------h-------hhhcccccCccHHHHHHHcCC----HHHHHHHHhcCCCCCCCCCCCCCcH
Q 036326 94 -LESGVGASR------------Q-------TIRMTNQVKHTALHQAVFHIT----VDVVKILTREDPDYPYSANNYSKTP 149 (225)
Q Consensus 94 -~~~~~~~~~------------~-------~~~~~~~~g~t~L~~A~~~g~----~~~v~~Ll~~~~~~~~~~~~~~~t~ 149 (225)
...+.++++ . .++.++..|.||||+|+..++ .+++++|++.|++++ ..+..|.||
T Consensus 144 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~-~~~~~g~t~ 222 (285)
T 1wdy_A 144 LRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVN-VRGERGKTP 222 (285)
T ss_dssp TTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSS-CCCTTSCCH
T ss_pred hccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCC-CcCCCCCcH
Confidence 233344432 2 234567789999999999999 899999999999988 788899999
Q ss_pred HHHHHHcCCHHHHHHHHh-hCCCccccccCcCCcHHHHHHHcCCHHHHHHHHHhchhhhccccCC
Q 036326 150 LCMAAEYKDARVVEAIIS-RNPECYELVDNWGWNFLHYAVFSFEVEELRNLVDNMLASSLMNEGD 213 (225)
Q Consensus 150 l~~a~~~g~~~~~~~Ll~-~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d 213 (225)
||+|+..|+.+++++|++ .+++ ++.++..|.||||+|+..|+.+++++|+++|++ ++.+|
T Consensus 223 L~~A~~~~~~~~v~~Ll~~~g~~-~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~---~~~~d 283 (285)
T 1wdy_A 223 LILAVEKKHLGLVQRLLEQEHIE-INDTDSDGKTALLLAVELKLKKIAELLCKRGAS---TDCGD 283 (285)
T ss_dssp HHHHHHTTCHHHHHHHHHSSSCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSC---SCCSS
T ss_pred HHHHHHcCCHHHHHHHHhccCCC-ccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCC---CCccc
Confidence 999999999999999999 6665 999999999999999999999999999999999 66665
No 34
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=100.00 E-value=3.2e-33 Score=204.89 Aligned_cols=162 Identities=17% Similarity=0.163 Sum_probs=152.6
Q ss_pred ccCcCCCChHHHHHHHcCCcHHHHHHHHhhCCccccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhccc
Q 036326 19 EISQSQIDPNLFKATAAGNSEPFKDMAREICPSLLLQVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGV 98 (225)
Q Consensus 19 ~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~ 98 (225)
...+..|+||||.|+..|+.+++++|++.+. .++..+..|.|| ||+|+..|+.+++++|++.|++++
T Consensus 29 n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~--~~~~~~~~g~t~-L~~A~~~~~~~~v~~Ll~~g~~~~---------- 95 (192)
T 2rfm_A 29 NYRDSYNRTPLMVACMLGMENAIDKLVENFD--KLEDKDIEGSTA-LIWAVKNNRLGIAEKLLSKGSNVN---------- 95 (192)
T ss_dssp TCCCTTCCCHHHHHHHHTCGGGHHHHHHHHC--CTTCCCTTSCCH-HHHHHHTTCHHHHHHHHHHTCCTT----------
T ss_pred hCcCCCCCCHHHHHHHcCCHHHHHHHHHhcc--ccccccccCccH-HHHHHHcCCHHHHHHHHHCCCCCC----------
Confidence 3456779999999999999999999998876 477789999999 999999999999999999999988
Q ss_pred ccchhhhhcccccCccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCccccccC
Q 036326 99 GASRQTIRMTNQVKHTALHQAVFHITVDVVKILTREDPDYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVDN 178 (225)
Q Consensus 99 ~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~ 178 (225)
.++..|.||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+..|+.+++++|+++|++ ++.++.
T Consensus 96 --------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~ 165 (192)
T 2rfm_A 96 --------TKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVN-DRNLEGETPLIVASKYGRSEIVKKLLELGAD-ISARDL 165 (192)
T ss_dssp --------CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSS-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-TTCBCT
T ss_pred --------CCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCcCC
Confidence 788899999999999999999999999999988 7889999999999999999999999999988 999999
Q ss_pred cCCcHHHHHHHcCCHHHHHHHHHhc
Q 036326 179 WGWNFLHYAVFSFEVEELRNLVDNM 203 (225)
Q Consensus 179 ~~~t~l~~a~~~~~~~~~~~Ll~~g 203 (225)
.|.||+|+|+..|+.+++++|+++|
T Consensus 166 ~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 166 TGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp TSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 9999999999999999999999987
No 35
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=2.7e-33 Score=222.67 Aligned_cols=190 Identities=13% Similarity=0.063 Sum_probs=149.9
Q ss_pred CcCCCChHHHHHHHcCCcHHHHHHHHhhCCccccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhh------
Q 036326 21 SQSQIDPNLFKATAAGNSEPFKDMAREICPSLLLQVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEEL------ 94 (225)
Q Consensus 21 ~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~------ 94 (225)
.+..|.||||.|+..|+.+++++|++.+. .++..+..|.|| ||+|+..|+.+++++|+++|++++..+...
T Consensus 87 ~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~--~~~~~~~~g~t~-L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~ 163 (351)
T 3utm_A 87 KDKGGLVPLHNACSYGHYEVTELLLKHGA--CVNAMDLWQFTP-LHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDM 163 (351)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHTTC--CTTCCCTTCCCH-HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred cCCCCCcHHHHHHHCCCHHHHHHHHHCCC--CCCCCCCCCCCH-HHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHH
Confidence 46679999999999999999999998876 477789999999 999999999999999999999877443111
Q ss_pred ---------------------------------------------hcccccch---------------------hhhhcc
Q 036326 95 ---------------------------------------------ESGVGASR---------------------QTIRMT 108 (225)
Q Consensus 95 ---------------------------------------------~~~~~~~~---------------------~~~~~~ 108 (225)
..+.++++ ..++.+
T Consensus 164 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~ 243 (351)
T 3utm_A 164 APTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEK 243 (351)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCC
T ss_pred HhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCc
Confidence 11222222 123567
Q ss_pred cccCccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCccccccCcCCcHHHHHH
Q 036326 109 NQVKHTALHQAVFHITVDVVKILTREDPDYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVDNWGWNFLHYAV 188 (225)
Q Consensus 109 ~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~ 188 (225)
+..|.||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+..|+.+++++|+++|++ ++.++..|.||+++|
T Consensus 244 ~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n-~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad-~~~~~~~g~tal~~a- 320 (351)
T 3utm_A 244 NKDFMTPLHVAAERAHNDVMEVLHKHGAKMN-ALDSLGQTALHRAALAGHLQTCRLLLSYGSD-PSIISLQGFTAAQMG- 320 (351)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHS-
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-CcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC-CCCcCCCCCChhhhh-
Confidence 8899999999999999999999999999988 7889999999999999999999999999998 999999999999987
Q ss_pred HcCCHHHHHHHHHhchhhhccccCCCCCCCcchhccC
Q 036326 189 FSFEVEELRNLVDNMLASSLMNEGDAKGKSNVHFFAA 225 (225)
Q Consensus 189 ~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~a~~ 225 (225)
..+++++|.+.+.. . ...+.+++..|++
T Consensus 321 ---~~~~~~~l~~~~~~---~---~~~~~~~l~~A~~ 348 (351)
T 3utm_A 321 ---NEAVQQILSESTPM---R---TSDVDYRLLEASK 348 (351)
T ss_dssp ---CHHHHHHHHHC-----------------------
T ss_pred ---hHHHHHHHHhcccc---c---cCcceeehhhhhc
Confidence 67899999988754 2 2356778877764
No 36
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=9.6e-35 Score=223.87 Aligned_cols=177 Identities=19% Similarity=0.177 Sum_probs=137.0
Q ss_pred CChHHHHHHHcCCcHHHHHHHHhhCCc------cccccCCCCCCHHHHHHHhcCcH-HHHHHHHhcCccCccchhhhhcc
Q 036326 25 IDPNLFKATAAGNSEPFKDMAREICPS------LLLQVNAKGDSRSLLNATKFGHC-DIASVLIERAKLVEHEDEELESG 97 (225)
Q Consensus 25 ~~~~L~~A~~~g~~~~v~~Ll~~~~~~------~~~~~~~~g~t~~lh~a~~~g~~-~~~~~Ll~~~~~~~~~~~~~~~~ 97 (225)
+.++|+.|++.|+.++|++|++.+... .++..+..+.|| ||+|+..+.. .+++.|++.|++++
T Consensus 11 ~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~-L~~a~~~~~~~~~v~~Ll~~Gadvn--------- 80 (269)
T 4b93_B 11 EVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHP-LCQCPKCAPAQKRLAKVPASGLGVN--------- 80 (269)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHTCC-----------------------------------------CCCCTT---------
T ss_pred chhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCH-HHHHHHhCCHHHHHHHHHHCCCCCC---------
Confidence 458999999999999999999765431 245567889999 9999988765 57899999999999
Q ss_pred cccchhhhhcccccCccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCcccccc
Q 036326 98 VGASRQTIRMTNQVKHTALHQAVFHITVDVVKILTREDPDYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVD 177 (225)
Q Consensus 98 ~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~ 177 (225)
.++..|.||||+|+..|+.+++++|++.+++++ ..+..|.||+++|+..++.+++++|++.|++ ++.++
T Consensus 81 ---------~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~-~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~-~n~~d 149 (269)
T 4b93_B 81 ---------VTSQDGSSPLHVAALHGRADLIPLLLKHGANAG-ARNADQAVPLHLACQQGHFQVVKCLLDSNAK-PNKKD 149 (269)
T ss_dssp ---------CCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTT-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-SCCCC
T ss_pred ---------CcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcC-ccCCCCCCccccccccChHHHHHHHHHCCCC-CCCCC
Confidence 889999999999999999999999999999987 7888999999999999999999999999988 99999
Q ss_pred CcCCcHHHHHHHcCCHHHHHHHHHhchhhhccccCCCCCCCcchhccC
Q 036326 178 NWGWNFLHYAVFSFEVEELRNLVDNMLASSLMNEGDAKGKSNVHFFAA 225 (225)
Q Consensus 178 ~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~a~~ 225 (225)
..|+||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|++
T Consensus 150 ~~g~TpL~~A~~~g~~~~v~~Ll~~gad---vn~~~~~g~t~Lh~A~~ 194 (269)
T 4b93_B 150 LSGNTPLIYACSGGHHELVALLLQHGAS---INASNNKGNTALHEAVI 194 (269)
T ss_dssp TTCCCHHHHHHHTTCGGGHHHHHHTTCC---TTCBCTTSCBHHHHHHH
T ss_pred CCCCCHHHHHHHCCCHHHHHHHHHCCCC---CCccccCCCcHHHHHHH
Confidence 9999999999999999999999999999 89999999999999973
No 37
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.2e-33 Score=231.64 Aligned_cols=192 Identities=21% Similarity=0.206 Sum_probs=97.4
Q ss_pred cCCCChHHHHHHHcCCcHHHHHHHHhhCCccccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhcccccc
Q 036326 22 QSQIDPNLFKATAAGNSEPFKDMAREICPSLLLQVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGAS 101 (225)
Q Consensus 22 ~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~ 101 (225)
...|.||||.|+..|+.+++++|+..+. .++..+..|.|| ||+|+..|+.+++++|++.|++++..+ ..+.+++
T Consensus 11 ~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~--~~~~~~~~~~t~-L~~A~~~g~~~~v~~Ll~~g~~~~~~~---~~g~t~L 84 (437)
T 1n11_A 11 GESGLTPLHVASFMGHLPIVKNLLQRGA--SPNVSNVKVETP-LHMAARAGHTEVAKYLLQNKAKVNAKA---KDDQTPL 84 (437)
T ss_dssp ----CCHHHHHHHHTCHHHHHHHHHTTC--CSCCSSSCCCCH-HHHHHHHTCHHHHHHHHHHTCCSSCCC---TTSCCHH
T ss_pred CCCCCCHHHHHHHCCCHHHHHHHHHcCC--CCCCCCCCCCCH-HHHHHHcCCHHHHHHHHhCCCCCCCCC---CCCCCHH
Confidence 3456666777777777777777666554 344566666666 677666666666776666666666111 0000110
Q ss_pred h------------hh------hhcccccCccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCcHHHHHHHcCCHHHHH
Q 036326 102 R------------QT------IRMTNQVKHTALHQAVFHITVDVVKILTREDPDYPYSANNYSKTPLCMAAEYKDARVVE 163 (225)
Q Consensus 102 ~------------~~------~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~ 163 (225)
+ .+ ++..+..|.||||+|+..|+.+++++|++.+.+.. ..+..|.||||+|+..|+.++++
T Consensus 85 ~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~-~~~~~g~t~L~~A~~~g~~~~v~ 163 (437)
T 1n11_A 85 HCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQA-CMTKKGFTPLHVAAKYGKVRVAE 163 (437)
T ss_dssp HHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSC-CCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCc-CCCCCCCCHHHHHHHcCCHHHHH
Confidence 0 00 01334444455555555555555555555444443 33444555555555555555555
Q ss_pred HHHhhCCCccccccCcCCcHHHHHHHcCCHHHHHHHHHhchhhhccccCCCCCCCcchhcc
Q 036326 164 AIISRNPECYELVDNWGWNFLHYAVFSFEVEELRNLVDNMLASSLMNEGDAKGKSNVHFFA 224 (225)
Q Consensus 164 ~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~a~ 224 (225)
+|+++++. ++..+..|.||||+|+..|+.+++++|+++|++ ++.++..|.||||+|+
T Consensus 164 ~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A~ 220 (437)
T 1n11_A 164 LLLERDAH-PNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGS---PHSPAWNGYTPLHIAA 220 (437)
T ss_dssp HHHHTTCC-TTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCC---SCCCCTTCCCHHHHHH
T ss_pred HHHhCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCC---CCCcCCCCCCHHHHHH
Confidence 55555444 444555555555555555555555555555554 4444445555555543
No 38
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=9.6e-34 Score=203.52 Aligned_cols=140 Identities=27% Similarity=0.321 Sum_probs=134.5
Q ss_pred CHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhcccccchhhhhcccccCccHHHHHHHcCCHHHHHHHHhcCCCCCCC
Q 036326 62 SRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGASRQTIRMTNQVKHTALHQAVFHITVDVVKILTREDPDYPYS 141 (225)
Q Consensus 62 t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~ 141 (225)
++ |+.||+.|+.++++.|++.|++++ .++..|.||||+|+..++.+++++|++.|++++ .
T Consensus 6 ~~-L~~Aa~~G~~~~v~~Ll~~Gadvn------------------~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~-~ 65 (169)
T 4gpm_A 6 KR-LIEAAENGNKDRVKDLIENGADVN------------------ASDSDGRTPLHHAAENGHKEVVKLLISKGADVN-A 65 (169)
T ss_dssp HH-HHHHHHTTCHHHHHHHHHTTCCTT------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-C
T ss_pred HH-HHHHHHcCCHHHHHHHHHCCCCCC------------------CcCCCCCCHHHHHHHcCCHHHHHHHHhcccchh-h
Confidence 46 999999999999999999999999 889999999999999999999999999999988 7
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhhCCCccccccCcCCcHHHHHHHcCCHHHHHHHHHhchhhhccccCCCCCCCcch
Q 036326 142 ANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVDNWGWNFLHYAVFSFEVEELRNLVDNMLASSLMNEGDAKGKSNVH 221 (225)
Q Consensus 142 ~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~ 221 (225)
.+..|+||||+|+..|+.+++++|+++|++ ++.++..|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||
T Consensus 66 ~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad-vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad---~~~~d~~G~TpL~ 141 (169)
T 4gpm_A 66 KDSDGRTPLHHAAENGHKEVVKLLISKGAD-VNAKDSDGRTPLHHAAENGHKEVVKLLISKGAD---VNTSDSDGRTPLD 141 (169)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHH
T ss_pred hccCCCCHHHHHHHcCCHHHHHHHHHCcCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---ccccCCCCCCHHH
Confidence 899999999999999999999999999998 999999999999999999999999999999999 8899999999999
Q ss_pred hccC
Q 036326 222 FFAA 225 (225)
Q Consensus 222 ~a~~ 225 (225)
+|++
T Consensus 142 ~A~~ 145 (169)
T 4gpm_A 142 LARE 145 (169)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9973
No 39
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=100.00 E-value=4.7e-33 Score=199.56 Aligned_cols=159 Identities=16% Similarity=0.166 Sum_probs=151.1
Q ss_pred CCChHHHHHHHcCCcHHHHHHHHhhCCccccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhcccccchh
Q 036326 24 QIDPNLFKATAAGNSEPFKDMAREICPSLLLQVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGASRQ 103 (225)
Q Consensus 24 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~ 103 (225)
.|.||||.|+..|+.+++++|++.+. .++..+..|.|| ||+|+..|+.+++++|++.|++++
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~--~~~~~~~~g~t~-L~~A~~~~~~~~v~~Ll~~g~~~~--------------- 63 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQEN--VINHTDEEGFTP-LMWAAAHGQIAVVEFLLQNGADPQ--------------- 63 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSS--CTTCCCTTSCCH-HHHHHHTTCHHHHHHHHHTTCCTT---------------
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCC--CcCCCCCCCCCH-HHHHHHCCCHHHHHHHHHcCCCCC---------------
Confidence 36799999999999999999998865 478899999999 999999999999999999999998
Q ss_pred hhhcccccCccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCccccccCcCCcH
Q 036326 104 TIRMTNQVKHTALHQAVFHITVDVVKILTREDPDYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVDNWGWNF 183 (225)
Q Consensus 104 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~t~ 183 (225)
.++..|.||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+..|+.+++++|+++|++ ++.++..|.||
T Consensus 64 ---~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~ 138 (167)
T 3v31_A 64 ---LLGKGRESALSLACSKGYTDIVKMLLDCGVDVN-EYDWNGGTPLLYAVHGNHVKCVKMLLESGAD-PTIETDSGYNS 138 (167)
T ss_dssp ---CCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCH
T ss_pred ---CcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCC-cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCH
Confidence 788899999999999999999999999999988 7888999999999999999999999999988 99999999999
Q ss_pred HHHHHHcCCHHHHHHHHHhchh
Q 036326 184 LHYAVFSFEVEELRNLVDNMLA 205 (225)
Q Consensus 184 l~~a~~~~~~~~~~~Ll~~g~~ 205 (225)
+|+|+..|+.+++++|++++++
T Consensus 139 l~~A~~~~~~~~~~~L~~~~~~ 160 (167)
T 3v31_A 139 MDLAVALGYRSVQQVIESHLLK 160 (167)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHcCcHHHHHHHHHHHHH
Confidence 9999999999999999999977
No 40
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=7.4e-34 Score=214.71 Aligned_cols=188 Identities=16% Similarity=0.154 Sum_probs=165.2
Q ss_pred ccCcCCCChHHHHHHHcCCcHHHHHHHHhhCCccccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhccc
Q 036326 19 EISQSQIDPNLFKATAAGNSEPFKDMAREICPSLLLQVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGV 98 (225)
Q Consensus 19 ~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~ 98 (225)
...+..|.||||.|+..|+.+++++|++.+. .++.++..|.|| ||+|+..|+.+++++|++.+.++..
T Consensus 39 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~--~~~~~~~~g~t~-L~~A~~~~~~~~v~~Ll~~~~~~~~--------- 106 (236)
T 1ikn_D 39 NFQNNLQQTPLHLAVITNQPEIAEALLGAGC--DPELRDFRGNTP-LHLACEQGCLASVGVLTQSCTTPHL--------- 106 (236)
T ss_dssp CCCCTTCCCHHHHHHHTTCHHHHHCCCSCCC--CSCCCCTTCCCH-HHHHHHHTCHHHHHHHHHSTTTTSS---------
T ss_pred hccCCCCCCHHHHHHHcCCHHHHHHHHHcCC--CCCCcCCCCCCH-HHHHHHcCCHHHHHHHHhcccchhH---------
Confidence 3456679999999999999999999998776 477799999999 9999999999999999999876431
Q ss_pred ccchhhhhcccccCccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCC-CCCcHHHHHHHcCCHHHHHHHHhhCCCcccccc
Q 036326 99 GASRQTIRMTNQVKHTALHQAVFHITVDVVKILTREDPDYPYSANN-YSKTPLCMAAEYKDARVVEAIISRNPECYELVD 177 (225)
Q Consensus 99 ~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~-~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~ 177 (225)
...++..+..|.||||+|+..|+.+++++|++.|++++ ..+. .|.||||+|+..|+.+++++|+++|++ ++.++
T Consensus 107 ---~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~-~~~~~ 181 (236)
T 1ikn_D 107 ---HSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVN-AQEPCNGRTALHLAVDLQNPDLVSLLLKCGAD-VNRVT 181 (236)
T ss_dssp ---SCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTT-CCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCC-SCCCC
T ss_pred ---HHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccc
Confidence 11123678889999999999999999999999999988 5665 899999999999999999999999988 99999
Q ss_pred CcCCcHHHHHHHcCCHHHHHHHHHhchhhhccccCCCCCCCcchhcc
Q 036326 178 NWGWNFLHYAVFSFEVEELRNLVDNMLASSLMNEGDAKGKSNVHFFA 224 (225)
Q Consensus 178 ~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~a~ 224 (225)
..|.||||+|+..|+.+++++|+++|+++ ....++..|.||.+.+.
T Consensus 182 ~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~-~~~~~~~~~~~~~~~~~ 227 (236)
T 1ikn_D 182 YQGYSPYQLTWGRPSTRIQQQLGQLTLEN-LQMLPESEDEESYDTES 227 (236)
T ss_dssp TTCCCGGGGCTTSSCHHHHHHHHTTSCGG-GSSCCCCCTTTCCCCC-
T ss_pred CCCCCHHHHHHccCchHHHHHHHHcchhh-hhcCCccchHHHHhhhc
Confidence 99999999999999999999999999983 23477889999988664
No 41
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=4.5e-33 Score=210.20 Aligned_cols=180 Identities=17% Similarity=0.120 Sum_probs=154.1
Q ss_pred CcCCCChHHHHHHHcCCcHHHHHHHHhhCCccccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhccccc
Q 036326 21 SQSQIDPNLFKATAAGNSEPFKDMAREICPSLLLQVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGA 100 (225)
Q Consensus 21 ~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~ 100 (225)
....|.||||.|+..|+.+++++|++.+.. .....+..|.|| ||+|+..|+.+++++|++.|++++
T Consensus 38 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~-~~~~~~~~~~t~-L~~A~~~~~~~~v~~Ll~~g~~~~------------ 103 (240)
T 3eu9_A 38 PDKENVTLLHWAAINNRIDLVKYYISKGAI-VDQLGGDLNSTP-LHWATRQGHLSMVVQLMKYGADPS------------ 103 (240)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCBTTTTBCH-HHHHHHHTCHHHHHHHHHTTCCTT------------
T ss_pred CCCCCCCHHHHHHHhCCHHHHHHHHHcCCc-chhhcCCcCCCh-hHHHHHcCCHHHHHHHHHcCCCCc------------
Confidence 345678888888888888888888876653 222344557888 888888888888888888888877
Q ss_pred chhhhhcccccCccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCcHHHHHHHcCC-HHHHHHHHhhCCCccccccC-
Q 036326 101 SRQTIRMTNQVKHTALHQAVFHITVDVVKILTREDPDYPYSANNYSKTPLCMAAEYKD-ARVVEAIISRNPECYELVDN- 178 (225)
Q Consensus 101 ~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~g~-~~~~~~Ll~~~~~~~~~~~~- 178 (225)
.++..|.||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+..++ .+++++|+..+++ ++..+.
T Consensus 104 ------~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~-~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~-~~~~~~~ 175 (240)
T 3eu9_A 104 ------LIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVD-MMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVS-VNLGDKY 175 (240)
T ss_dssp ------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCC-TTCCCTT
T ss_pred ------ccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCcc-ccCCCCCcHHHHHHHhCChHHHHHHHHhcCCC-cchhhcc
Confidence 778889999999999999999999999999987 788899999999997776 7899999999987 888886
Q ss_pred cCCcHHHHHHHcCCHHHHHHHHHhchhhhccccCCCCCCCcchhccC
Q 036326 179 WGWNFLHYAVFSFEVEELRNLVDNMLASSLMNEGDAKGKSNVHFFAA 225 (225)
Q Consensus 179 ~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~a~~ 225 (225)
.|.||||+|+..|+.+++++|+++|++ ++.+|..|+||+|+|++
T Consensus 176 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~l~~A~~ 219 (240)
T 3eu9_A 176 HKNTALHWAVLAGNTTVISLLLEAGAN---VDAQNIKGESALDLAKQ 219 (240)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHHTCC---TTCBCTTSCBHHHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCC---CCCcCCCCCCHHHHHHH
Confidence 899999999999999999999999999 88889999999999863
No 42
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=1.5e-33 Score=223.10 Aligned_cols=171 Identities=18% Similarity=0.119 Sum_probs=145.9
Q ss_pred CcCCCChHHHHHHHcCCcHHHHHHHHhhCCccccccCCCCCCHHHHHHHhcCc---HHHHHHHHhcC-ccCccchhhhhc
Q 036326 21 SQSQIDPNLFKATAAGNSEPFKDMAREICPSLLLQVNAKGDSRSLLNATKFGH---CDIASVLIERA-KLVEHEDEELES 96 (225)
Q Consensus 21 ~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~~lh~a~~~g~---~~~~~~Ll~~~-~~~~~~~~~~~~ 96 (225)
.+..|+||||+|+..|+.+++++|++.+. +++.+|..|.|| ||+|+..|+ .++++.|++.+ .+++
T Consensus 127 ~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Ga--d~n~~d~~g~Tp-Lh~A~~~g~~~~~~~~~~ll~~~~~~~~-------- 195 (327)
T 1sw6_A 127 VDEHGNTPLHWLTSIANLELVKHLVKHGS--NRLYGDNMGESC-LVKAVKSVNNYDSGTFEALLDYLYPCLI-------- 195 (327)
T ss_dssp CSTTCCCHHHHHHHTTCHHHHHHHHHTTC--CTTBCCTTCCCH-HHHHHHSSHHHHTTCHHHHHHHHGGGGG--------
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcCC--CCCCcCCCCCCH-HHHHHHhcccccHHHHHHHHHhhhcccc--------
Confidence 45679999999999999999999999886 577899999999 999999998 78888888876 5566
Q ss_pred ccccchhhhhcccccCccHHHHHHH----cCCHHHHHHHHhc--------------------CCCCCCCCCCCCCcHHHH
Q 036326 97 GVGASRQTIRMTNQVKHTALHQAVF----HITVDVVKILTRE--------------------DPDYPYSANNYSKTPLCM 152 (225)
Q Consensus 97 ~~~~~~~~~~~~~~~g~t~L~~A~~----~g~~~~v~~Ll~~--------------------~~~~~~~~~~~~~t~l~~ 152 (225)
.++..|.||||+|+. .|+.+++++|++. |++++ ..+..|.||||+
T Consensus 196 ----------~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~-~~~~~g~t~L~~ 264 (327)
T 1sw6_A 196 ----------LEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPN-DKNGERKDSILE 264 (327)
T ss_dssp ----------EECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC-----------------CHHHH
T ss_pred ----------CCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcc-cccccCCChhHH
Confidence 788999999999999 8999999999987 77777 788899999999
Q ss_pred HHHcCCHHHHHHHHhhCCCccccccCcCCcHHHHHHHcCCHHHHHHHHHhchhhhccccCCCCCCCcchhccC
Q 036326 153 AAEYKDARVVEAIISRNPECYELVDNWGWNFLHYAVFSFEVEELRNLVDNMLASSLMNEGDAKGKSNVHFFAA 225 (225)
Q Consensus 153 a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~a~~ 225 (225)
|+. +++|+++ + ++.++..|+||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|++
T Consensus 265 a~~------~~~Ll~~--~-~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad---~~~~d~~G~TpL~~A~~ 325 (327)
T 1sw6_A 265 NLD------LKWIIAN--M-LNAQDSNGDTCLNIAARLGNISIVDALLDYGAD---PFIANKSGLRPVDFGAG 325 (327)
T ss_dssp HCS------HHHHHHH--T-TTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCC---TTCCCTTSCCGGGGTCC
T ss_pred HHH------HHHHHHh--C-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CcccCCCCCCHHHHHHh
Confidence 985 8899988 3 889999999999999999999999999999999 89999999999999985
No 43
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=100.00 E-value=9.4e-33 Score=198.51 Aligned_cols=160 Identities=19% Similarity=0.248 Sum_probs=148.3
Q ss_pred CcCCCChHHHHHHHcCCcHHHHHHHHhhCCccccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhccccc
Q 036326 21 SQSQIDPNLFKATAAGNSEPFKDMAREICPSLLLQVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGA 100 (225)
Q Consensus 21 ~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~ 100 (225)
+...+.++|+.|++.|+.+++++|++.+. +++..+..|.|| ||+|+..|+.+++++|++.|++++
T Consensus 10 ~~~~~~~~l~~A~~~g~~~~v~~Ll~~g~--~~~~~~~~g~t~-L~~A~~~~~~~~v~~Ll~~g~~~~------------ 74 (169)
T 2y1l_E 10 HGSDLGKKLLEAARAGRDDEVRILMANGA--DVNAEDASGWTP-LHLAAFNGHLEIVEVLLKNGADVN------------ 74 (169)
T ss_dssp ---CHHHHHHHHHHHTCHHHHHHHHHTTC--CTTCCCTTSCCH-HHHHHHTTCHHHHHHHHHTTCCTT------------
T ss_pred CCCcccchHHHHHHcCCHHHHHHHHHCCC--CCCCCCCCCCCH-HHHHHHcCCHHHHHHHHHcCCCCC------------
Confidence 34556789999999999999999998876 477899999999 999999999999999999999988
Q ss_pred chhhhhcccccCccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCccccccCcC
Q 036326 101 SRQTIRMTNQVKHTALHQAVFHITVDVVKILTREDPDYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVDNWG 180 (225)
Q Consensus 101 ~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~ 180 (225)
.++..|.||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+..|+.+++++|+++|++ ++.++..|
T Consensus 75 ------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g 146 (169)
T 2y1l_E 75 ------AVDHAGMTPLRLAALFGHLEIVEVLLKNGADVN-ANDMEGHTPLHLAAMFGHLEIVEVLLKNGAD-VNAQDKFG 146 (169)
T ss_dssp ------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTS
T ss_pred ------ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCC
Confidence 788899999999999999999999999999987 7888999999999999999999999999988 99999999
Q ss_pred CcHHHHHHHcCCHHHHHHHHHhc
Q 036326 181 WNFLHYAVFSFEVEELRNLVDNM 203 (225)
Q Consensus 181 ~t~l~~a~~~~~~~~~~~Ll~~g 203 (225)
.|||++|+..|+.+++++|+++|
T Consensus 147 ~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 147 KTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp CCHHHHHHHTTCHHHHHHHHTC-
T ss_pred CCHHHHHHHhCCHHHHHHHHHcC
Confidence 99999999999999999999886
No 44
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=3e-33 Score=224.23 Aligned_cols=149 Identities=15% Similarity=0.073 Sum_probs=125.8
Q ss_pred cCCCCCCHHHHHHHhcC--cHHHHHHHHhcCccCccchhhhhcccccchhhhhcccccCccHHHHHHHcCCHHHHHHHHh
Q 036326 56 VNAKGDSRSLLNATKFG--HCDIASVLIERAKLVEHEDEELESGVGASRQTIRMTNQVKHTALHQAVFHITVDVVKILTR 133 (225)
Q Consensus 56 ~~~~g~t~~lh~a~~~g--~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~ 133 (225)
.+..|.|| ||+|+..| +.+++++|++.|++++ .++..|.||||+|+..|+.+++++|++
T Consensus 134 ~~~~g~t~-L~~A~~~g~~~~~~v~~Ll~~ga~~~------------------~~d~~g~t~L~~A~~~g~~~~v~~Ll~ 194 (364)
T 3ljn_A 134 KHCKGQTA-LHWCVGLGPEYLEMIKILVQLGASPT------------------AKDKADETPLMRAMEFRNREALDLMMD 194 (364)
T ss_dssp EEESCCCH-HHHHHHSCGGGHHHHHHHHHHTCCTT------------------CCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCCCCCCH-HHHHHHcCCchHHHHHHHHHcCCCCc------------------ccCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 44556666 66666666 6666666666666666 778899999999999999999999999
Q ss_pred cCCC-----CCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCccccccCcCCcHHHHHHHcCCHHHHHHHHHhchhhhc
Q 036326 134 EDPD-----YPYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVDNWGWNFLHYAVFSFEVEELRNLVDNMLASSL 208 (225)
Q Consensus 134 ~~~~-----~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~ 208 (225)
.|++ ++ ..+..|.||||+|+..|+.+++++|+++|++ ++.++..|.||||+|+..|+.+++++|+++|++++.
T Consensus 195 ~g~~~~~~~~~-~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad-~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~ 272 (364)
T 3ljn_A 195 TVPSKSSLRLD-YANKQGNSHLHWAILINWEDVAMRFVEMGID-VNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLI 272 (364)
T ss_dssp HCSCSSSCCTT-CCCTTCCCTTHHHHTTTCHHHHHHHHTTTCC-TTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHHHH
T ss_pred ccccccccccc-ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCchhh
Confidence 9988 76 7888999999999999999999999999998 999999999999999999999999999999988543
Q ss_pred ccc---------CCCCCCCcchhccC
Q 036326 209 MNE---------GDAKGKSNVHFFAA 225 (225)
Q Consensus 209 ~~~---------~d~~g~tpl~~a~~ 225 (225)
... .+..++||++.|++
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~l~~aa~ 298 (364)
T 3ljn_A 273 QACPYHNGTTVLPDRVVWLDFVPAAA 298 (364)
T ss_dssp HTCTTBSSSSBCGGGCCCCTTSCSSC
T ss_pred hcCcccCcccccccccccccchhhhh
Confidence 332 45677888887763
No 45
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=1.1e-33 Score=227.55 Aligned_cols=177 Identities=15% Similarity=0.180 Sum_probs=161.6
Q ss_pred CCCChHHHHHHHcCCcHHHHHHH--------HhhCCccccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhh
Q 036326 23 SQIDPNLFKATAAGNSEPFKDMA--------REICPSLLLQVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEEL 94 (225)
Q Consensus 23 ~~~~~~L~~A~~~g~~~~v~~Ll--------~~~~~~~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~ 94 (225)
..|+||||.|+..|+.+++++|+ ..+. +++.+|..|.|| ||+|+..|+.+++++|+++|++++
T Consensus 123 ~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga--~vn~~d~~g~Tp-L~~A~~~g~~~iv~~Ll~~ga~~~------ 193 (373)
T 2fo1_E 123 RHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGA--DVNAMDCDENTP-LMLAVLARRRRLVAYLMKAGADPT------ 193 (373)
T ss_dssp SSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCC--CTTCCCTTSCCH-HHHHHHHTCHHHHHHHHHTTCCSC------
T ss_pred cCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCC--CCcCCCCCCCCH-HHHHHHcChHHHHHHHHHCCCCCc------
Confidence 67999999999999999888886 3444 578899999999 999999999999999999999999
Q ss_pred hcccccchhhhhcccccCccHHHHHHHcCCHHHHHHHHhcC---CCCCCCCCCCCCcHHHHHHHcC---CHHHHHHHHhh
Q 036326 95 ESGVGASRQTIRMTNQVKHTALHQAVFHITVDVVKILTRED---PDYPYSANNYSKTPLCMAAEYK---DARVVEAIISR 168 (225)
Q Consensus 95 ~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~---~~~~~~~~~~~~t~l~~a~~~g---~~~~~~~Ll~~ 168 (225)
.++..|.||||+|+..|+.+++++|++.+ .+++ ..+..|.||||+|+..+ +.+++++|+++
T Consensus 194 ------------~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~ 260 (373)
T 2fo1_E 194 ------------IYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIE-ELDRNGMTALMIVAHNEGRDQVASAKLLVEK 260 (373)
T ss_dssp ------------CCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTS-CCCTTSCCHHHHHHHSCSTTHHHHHHHHHHH
T ss_pred ------------ccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChh-hcCCCCCCHHHHHHHhCCcchHHHHHHHHHC
Confidence 78899999999999999999999999987 6766 78889999999999998 89999999999
Q ss_pred CCCcccc--------ccCcCCcHHHHHHHcCCHHHHHHHHHhc-hhhhccccCCCCCCCcchhccC
Q 036326 169 NPECYEL--------VDNWGWNFLHYAVFSFEVEELRNLVDNM-LASSLMNEGDAKGKSNVHFFAA 225 (225)
Q Consensus 169 ~~~~~~~--------~~~~~~t~l~~a~~~~~~~~~~~Ll~~g-~~~~~~~~~d~~g~tpl~~a~~ 225 (225)
|++ ++. ++..|.||||+|+..|+.+++++|+++| ++ ++.+|..|.||||+|++
T Consensus 261 g~~-~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~---~n~~d~~g~TpL~~A~~ 322 (373)
T 2fo1_E 261 GAK-VDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSN---KDKQDEDGKTPIMLAAQ 322 (373)
T ss_dssp TCC-SSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCC---TTCCCTTCCCHHHHHHH
T ss_pred CCC-cccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCC---ccCcCCCCCCHHHHHHH
Confidence 987 665 5678999999999999999999999987 88 89999999999999973
No 46
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=100.00 E-value=6.8e-34 Score=219.95 Aligned_cols=175 Identities=14% Similarity=0.139 Sum_probs=139.7
Q ss_pred ChHHHHHHHcCCcHHHHHHHHhhCCccccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCc-cCccchhhhhcccccchhh
Q 036326 26 DPNLFKATAAGNSEPFKDMAREICPSLLLQVNAKGDSRSLLNATKFGHCDIASVLIERAK-LVEHEDEELESGVGASRQT 104 (225)
Q Consensus 26 ~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~-~~~~~~~~~~~~~~~~~~~ 104 (225)
++++|.|+..|+.+.++.++..+....++..|..|.|| ||+|+..|+.+++++|++.|+ +++
T Consensus 77 ~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~-Lh~A~~~g~~~~v~~Ll~~g~~~~~---------------- 139 (276)
T 4hbd_A 77 RSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTA-LHYSVSHANFPVVQQLLDSGVCKVD---------------- 139 (276)
T ss_dssp STTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCH-HHHHHHTTCHHHHHHHHHTSCCCTT----------------
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCH-HHHHHHCCCHHHHHHHHHCCCCcCC----------------
Confidence 45567778888888888887665554567788888888 888888888888888888887 666
Q ss_pred hhcccccCccHHHHHH-----HcCCHHHHHHHHhcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCccccccCc
Q 036326 105 IRMTNQVKHTALHQAV-----FHITVDVVKILTREDPDYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVDNW 179 (225)
Q Consensus 105 ~~~~~~~g~t~L~~A~-----~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~ 179 (225)
.++..|.||||+|+ ..++.+++++|++.|.... ..+..|.||||+|+..|+.+++++|+++|++ ++.+|..
T Consensus 140 --~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~-~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad-~n~~d~~ 215 (276)
T 4hbd_A 140 --KQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINA-KASQAGQTALMLAVSHGRVDVVKALLACEAD-VNVQDDD 215 (276)
T ss_dssp --CCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTC-CCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTT
T ss_pred --CCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCcc-ccCCCCCCHHHHHHHcCCHHHHHHHHhCCCC-CCCCCCC
Confidence 67778888888888 5567788888888887665 6677788888888888888888888888877 8888888
Q ss_pred CCcHHHHHHHcCCHHHHHHHHH-hchhhhccccCCCCCCCcchhcc
Q 036326 180 GWNFLHYAVFSFEVEELRNLVD-NMLASSLMNEGDAKGKSNVHFFA 224 (225)
Q Consensus 180 ~~t~l~~a~~~~~~~~~~~Ll~-~g~~~~~~~~~d~~g~tpl~~a~ 224 (225)
|+||||+|+..|+.+++++|++ .|++ ++.+|..|+||||+|+
T Consensus 216 G~TpLh~A~~~g~~~iv~~Ll~~~gad---~~~~d~~g~TpL~~A~ 258 (276)
T 4hbd_A 216 GSTALMCACEHGHKEIAGLLLAVPSCD---ISLTDRDGSTALMVAL 258 (276)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHTSTTCC---TTCCCTTSCCHHHHHH
T ss_pred CCCHHHHHHHCCCHHHHHHHHhcCCCC---CcCcCCCCCCHHHHHH
Confidence 8888888888888888888888 7888 7777888888888876
No 47
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=1.6e-32 Score=211.70 Aligned_cols=190 Identities=16% Similarity=0.127 Sum_probs=146.2
Q ss_pred cCCCChHHHHHHHc---CCcHHHHHHHHhhCCc---------cccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCcc
Q 036326 22 QSQIDPNLFKATAA---GNSEPFKDMAREICPS---------LLLQVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEH 89 (225)
Q Consensus 22 ~~~~~~~L~~A~~~---g~~~~v~~Ll~~~~~~---------~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~ 89 (225)
...|.||||.|+.. |+.+++++|++.+... .....|..|.|| ||+|+..|+.+++++|+++|++++.
T Consensus 51 ~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tp-L~~A~~~g~~~~v~~Ll~~ga~~~~ 129 (273)
T 2pnn_A 51 PETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTA-LHIAIERRNMTLVTLLVENGADVQA 129 (273)
T ss_dssp TTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCH-HHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCH-HHHHHHcCCHHHHHHHHHCCCCcCc
Confidence 56799999999986 9999999999876421 122356789999 9999999999999999999999983
Q ss_pred chhhhhcccccchhhhhcccccCccHHHHHHHcCCHHHHHHHHh---cCCCCCCCCCCCCCcHHHHHHHcCC--------
Q 036326 90 EDEELESGVGASRQTIRMTNQVKHTALHQAVFHITVDVVKILTR---EDPDYPYSANNYSKTPLCMAAEYKD-------- 158 (225)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~---~~~~~~~~~~~~~~t~l~~a~~~g~-------- 158 (225)
.+..... ........+..|.||||+|+..|+.+++++|++ .|++++ ..+..|.||||+|+..|+
T Consensus 130 ~~~~~~~----~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~-~~d~~g~tpLh~A~~~~~~~~~~~~~ 204 (273)
T 2pnn_A 130 AANGDFF----KKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADIS-ARDSVGNTVLHALVEVADNTVDNTKF 204 (273)
T ss_dssp CBCSGGG----SSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTT-CCCTTSCCHHHHHHHHCCSCHHHHHH
T ss_pred ccccccc----ccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCce-eeCCCCCcHHHHHHHccCcchhHHHH
Confidence 2210000 000001112379999999999999999999999 899988 788999999999999998
Q ss_pred -HHHHHHHHhhCCCccc-------cccCcCCcHHHHHHHcCCHHHHHHHHHhch-hhhccccCCCCCCCcch
Q 036326 159 -ARVVEAIISRNPECYE-------LVDNWGWNFLHYAVFSFEVEELRNLVDNML-ASSLMNEGDAKGKSNVH 221 (225)
Q Consensus 159 -~~~~~~Ll~~~~~~~~-------~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~-~~~~~~~~d~~g~tpl~ 221 (225)
.+++++|+++|++ ++ .++..|+||||+|+..|+.+++++|+++|+ | .......+.+|.+
T Consensus 205 ~~~~v~~Ll~~ga~-~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~d---p~~~~~~~~~~~~ 272 (273)
T 2pnn_A 205 VTSMYNEILILGAK-LHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHE---PECRHAAAHHHHH 272 (273)
T ss_dssp HHHHHHHHHHHHHH-HCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC-----------------
T ss_pred HHHHHHHHHHhhhh-cccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCCCCC---chhhhhhhhhccC
Confidence 7999999999887 65 589999999999999999999999999999 6 5555556666654
No 48
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=100.00 E-value=5.6e-33 Score=198.77 Aligned_cols=162 Identities=16% Similarity=0.163 Sum_probs=146.7
Q ss_pred cCcCCCChHHHHHHHcCCcHHHHHHHHhhCCccccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhcccc
Q 036326 20 ISQSQIDPNLFKATAAGNSEPFKDMAREICPSLLLQVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVG 99 (225)
Q Consensus 20 ~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~ 99 (225)
+.+..+.++||.|++.|+.+.+++|+.... ......+..|.|| ||+|+..|+.+++++|+++|++++
T Consensus 3 ~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~-~~~~~~~~~g~t~-L~~A~~~~~~~~v~~Ll~~g~~~~----------- 69 (165)
T 3twr_A 3 MGNSEADRQLLEAAKAGDVETVKKLCTVQS-VNCRDIEGRQSTP-LHFAAGYNRVSVVEYLLQHGADVH----------- 69 (165)
T ss_dssp ---CHHHHHHHHHHHHTCHHHHHHHCCTTT-TTCCCTTTTCCCH-HHHHHHTTCHHHHHHHHHTTCCTT-----------
T ss_pred CCcchhhHHHHHHHHhCCHHHHHHHHHcCC-CCccccccCCCCH-HHHHHHcChHHHHHHHHhcCCCCC-----------
Confidence 456678899999999999999999996543 3567788889999 999999999999999999999998
Q ss_pred cchhhhhcccccCccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCccccccCc
Q 036326 100 ASRQTIRMTNQVKHTALHQAVFHITVDVVKILTREDPDYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVDNW 179 (225)
Q Consensus 100 ~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~ 179 (225)
.++..|.||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+..|+.+++++|+++|++ ++.++..
T Consensus 70 -------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~ 140 (165)
T 3twr_A 70 -------AKDKGGLVPLHNACSYGHYEVAELLVKHGAVVN-VADLWKFTPLHEAAAKGKYEICKLLLQHGAD-PTKKNRD 140 (165)
T ss_dssp -------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTT
T ss_pred -------ccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CcccCCC
Confidence 788999999999999999999999999999988 7888999999999999999999999999988 9999999
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhch
Q 036326 180 GWNFLHYAVFSFEVEELRNLVDNML 204 (225)
Q Consensus 180 ~~t~l~~a~~~~~~~~~~~Ll~~g~ 204 (225)
|.||+|+|+. ++.+++++|+++|+
T Consensus 141 g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 141 GNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp SCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred CCChhHhHhc-CChHHHHHHhhccc
Confidence 9999999876 99999999999986
No 49
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=6.2e-32 Score=203.51 Aligned_cols=180 Identities=12% Similarity=0.046 Sum_probs=152.7
Q ss_pred ccCcCCCChHHHHHHHcCCcHHHHHHHHhhCCc---cccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhh
Q 036326 19 EISQSQIDPNLFKATAAGNSEPFKDMAREICPS---LLLQVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELE 95 (225)
Q Consensus 19 ~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~---~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~ 95 (225)
...+..|+||||.|+..|+.+++++|++.+... .....|..|.|| ||+|+..|+.+++++|+++|++++..+..
T Consensus 31 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~-L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-- 107 (232)
T 2rfa_A 31 HQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTA-LHIAVINQNVNLVRALLARGASVSARATG-- 107 (232)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCH-HHHHHHTTCHHHHHHHHHTTCCTTCCCCS--
T ss_pred ccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCH-HHHHHHcCCHHHHHHHHhCCCCCCcccCC--
Confidence 344677999999999999999999999876532 115567899999 99999999999999999999998843211
Q ss_pred cccccchhhhhcccccCccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCcHHHHHHHcCCHHHH----HHHHhhCCC
Q 036326 96 SGVGASRQTIRMTNQVKHTALHQAVFHITVDVVKILTREDPDYPYSANNYSKTPLCMAAEYKDARVV----EAIISRNPE 171 (225)
Q Consensus 96 ~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~g~~~~~----~~Ll~~~~~ 171 (225)
..+....+..+..|.||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+..|+.+++ ++|++.++.
T Consensus 108 ---~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~ 183 (232)
T 2rfa_A 108 ---SVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIR-AQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGG 183 (232)
T ss_dssp ---GGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCS
T ss_pred ---cceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCc
Confidence 11111223345589999999999999999999999999988 7899999999999999999988 999999987
Q ss_pred cc-----ccccCcCCcHHHHHHHcCCHHHHHHHHHhchh
Q 036326 172 CY-----ELVDNWGWNFLHYAVFSFEVEELRNLVDNMLA 205 (225)
Q Consensus 172 ~~-----~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~ 205 (225)
.. +.++..|.||||+|+..|+.+++++|+++|++
T Consensus 184 ~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~ 222 (232)
T 2rfa_A 184 DHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKH 222 (232)
T ss_dssp CSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred hhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCcc
Confidence 22 68899999999999999999999999999988
No 50
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=100.00 E-value=1.7e-32 Score=198.91 Aligned_cols=167 Identities=20% Similarity=0.185 Sum_probs=152.8
Q ss_pred CCChHHHHHHHcCCcHHHHHHHHhhCCccccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhcccccchh
Q 036326 24 QIDPNLFKATAAGNSEPFKDMAREICPSLLLQVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGASRQ 103 (225)
Q Consensus 24 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~ 103 (225)
++.++||.|+..|+.+.+++|+.... ..++..+..|.|| ||+|+..|+.+++++|++.|++++
T Consensus 4 ~~~~~l~~A~~~g~~~~v~~ll~~~~-~~~~~~~~~g~t~-L~~A~~~~~~~~v~~Ll~~g~~~~--------------- 66 (179)
T 3f6q_A 4 EFMDDIFTQCREGNAVAVRLWLDNTE-NDLNQGDDHGFSP-LHWACREGRSAVVEMLIMRGARIN--------------- 66 (179)
T ss_dssp ---CCHHHHHHHTCHHHHHHHHHCTT-SCTTCCCTTSCCH-HHHHHHTTCHHHHHHHHHTTCCTT---------------
T ss_pred HHHHHHHHHHHcCCHHHHHHHHhcCc-ccccccCCCCCCH-HHHHHHcCcHHHHHHHHHcCCCCC---------------
Confidence 46688999999999999999997643 3578899999999 999999999999999999999998
Q ss_pred hhhcccccCccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCccccccCcCCcH
Q 036326 104 TIRMTNQVKHTALHQAVFHITVDVVKILTREDPDYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVDNWGWNF 183 (225)
Q Consensus 104 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~t~ 183 (225)
.++..|.||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+..|+.+++++|+++|++ ++.++..|.||
T Consensus 67 ---~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~tp 141 (179)
T 3f6q_A 67 ---VMNRGDDTPLHLAASHGHRDIVQKLLQYKADIN-AVNEHGNVPLHYACFWGQDQVAEDLVANGAL-VSICNKYGEMP 141 (179)
T ss_dssp ---CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-SSBCCTTSCCG
T ss_pred ---CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-ccCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-cchhccCCCCc
Confidence 788999999999999999999999999999988 7889999999999999999999999999988 99999999999
Q ss_pred HHHHHHcCCHHHHHHHHHhchhhhccccCCCC
Q 036326 184 LHYAVFSFEVEELRNLVDNMLASSLMNEGDAK 215 (225)
Q Consensus 184 l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~ 215 (225)
+++|+..++.+++++|+++|++ ++..+..
T Consensus 142 l~~A~~~~~~~~~~~L~~~g~~---~~~~~~~ 170 (179)
T 3f6q_A 142 VDKAKAPLRELLRERAEKMGQN---LNRIPYK 170 (179)
T ss_dssp GGGSCHHHHHHHHHHHHHTTCC---CSCBCCC
T ss_pred HHHHHHHHHHHHHHHHHHhhcC---cccCCcc
Confidence 9999999999999999999999 5554443
No 51
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=100.00 E-value=6.6e-32 Score=191.39 Aligned_cols=154 Identities=18% Similarity=0.186 Sum_probs=144.5
Q ss_pred CChHHHHHHHcCCcHHHHHHHHhhCCccccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhcccccchhh
Q 036326 25 IDPNLFKATAAGNSEPFKDMAREICPSLLLQVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGASRQT 104 (225)
Q Consensus 25 ~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~ 104 (225)
+.++||.|+..|+.+.+++|++. .+..++..+..|.|| ||+ +..|+.+++++|++.|++++
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~-~~~~~~~~~~~g~t~-L~~-~~~~~~~~v~~Ll~~g~~~~---------------- 62 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHR-ELVHPDALNRFGKTA-LQV-MMFGSTAIALELLKQGASPN---------------- 62 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHT-TCCCTTCCCTTSCCH-HHH-SCTTCHHHHHHHHHTTCCTT----------------
T ss_pred cchHHHHHHHhCCHHHHHHHHHh-hCcCccccCCCCCcH-HHH-HHcCCHHHHHHHHHCCCCCC----------------
Confidence 45899999999999999999977 444678899999999 999 99999999999999999998
Q ss_pred hhcccccCccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCccccccCcCCcHH
Q 036326 105 IRMTNQVKHTALHQAVFHITVDVVKILTREDPDYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVDNWGWNFL 184 (225)
Q Consensus 105 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~t~l 184 (225)
.++..|.||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+..|+.+++++|++. ++ ++.++..|.|||
T Consensus 63 --~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~-~~~~~~~g~t~l 137 (156)
T 1bd8_A 63 --VQDTSGTSPVHDAARTGFLDTLKVLVEHGADVN-VPDGTGALPIHLAVQEGHTAVVSFLAAE-SD-LHRRDARGLTPL 137 (156)
T ss_dssp --CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSC-CCCTTSCCHHHHHHHHTCHHHHHHHHTT-SC-TTCCCTTSCCHH
T ss_pred --CcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCC-CcCCCCCcHHHHHHHhChHHHHHHHHhc-cC-CCCcCCCCCCHH
Confidence 788999999999999999999999999999987 7888999999999999999999999999 66 999999999999
Q ss_pred HHHHHcCCHHHHHHHHHh
Q 036326 185 HYAVFSFEVEELRNLVDN 202 (225)
Q Consensus 185 ~~a~~~~~~~~~~~Ll~~ 202 (225)
|+|+..|+.+++++|+++
T Consensus 138 ~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 138 ELALQRGAQDLVDILQGH 155 (156)
T ss_dssp HHHHHSCCHHHHHHHHTT
T ss_pred HHHHHcCcHHHHHHHHhh
Confidence 999999999999999875
No 52
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=3e-32 Score=216.21 Aligned_cols=190 Identities=18% Similarity=0.191 Sum_probs=128.2
Q ss_pred CCChHHHHHHHcCCcHHHHHHHHhhCCccccccCC-CCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhcccccch
Q 036326 24 QIDPNLFKATAAGNSEPFKDMAREICPSLLLQVNA-KGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGASR 102 (225)
Q Consensus 24 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~-~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~ 102 (225)
+++|+||.|++.|++++|++|++.|. +++.++. .|.|| ||+|+..|+.+++++|+++|++++..+.. +.++..
T Consensus 24 ~~~t~L~~Av~~g~~~~V~~LL~~Ga--dvn~~~~~~g~Tp-Lh~A~~~g~~~iv~~Ll~~ga~~~~~~~~---~~~~~~ 97 (337)
T 4g8k_A 24 EDNHLLIKAVQNEDVDLVQQLLEGGA--NVNFQEEEGGWTP-LHNAVQMSREDIVELLLRHGADPVLRKKN---GATPFI 97 (337)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHTC--CTTCCCTTTCCCH-HHHHHHTTCHHHHHHHHHTTCCTTCCCTT---CCCHHH
T ss_pred CCChHHHHHHHcCCHHHHHHHHHCCC--CCCccCCCCCcCH-HHHHHHcCCHHHHHHHHHcCCchhhhccC---CCchhH
Confidence 46899999999999999999999887 4666765 58999 99999999999999999999988754321 111110
Q ss_pred ------------------hhhhcccccC-------------------------------------------ccHHHHHHH
Q 036326 103 ------------------QTIRMTNQVK-------------------------------------------HTALHQAVF 121 (225)
Q Consensus 103 ------------------~~~~~~~~~g-------------------------------------------~t~L~~A~~ 121 (225)
..++.++..| .||||+|+.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~ 177 (337)
T 4g8k_A 98 LAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAE 177 (337)
T ss_dssp HHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHH
T ss_pred HHHhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHH
Confidence 1122333444 455555555
Q ss_pred cCCHHHHHHHHh-cCCCCCCCCCCCCCcHHHHHHHcCC----HHHHHHHHhhCCCccccccCcCCcHHHHHHHcCCHHHH
Q 036326 122 HITVDVVKILTR-EDPDYPYSANNYSKTPLCMAAEYKD----ARVVEAIISRNPECYELVDNWGWNFLHYAVFSFEVEEL 196 (225)
Q Consensus 122 ~g~~~~v~~Ll~-~~~~~~~~~~~~~~t~l~~a~~~g~----~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~ 196 (225)
.|+.+++++|++ .|++++ ..+..|.|+++.++..+. ..++++|+++|++ ++.++..|+||||+|+..|+.+++
T Consensus 178 ~g~~~~v~~LL~~~gad~n-~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad-~n~~d~~g~t~L~~a~~~~~~~~v 255 (337)
T 4g8k_A 178 KGHVEVLKILLDEMGADVN-ACDNMGRNALIHALLSSDDSDVEAITHLLLDHGAD-VNVRGERGKTPLILAVEKKHLGLV 255 (337)
T ss_dssp HTCHHHHHHHHHHSCCCTT-CCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCC-TTCCCGGGCCHHHHHHHTTCHHHH
T ss_pred CCCHHHHHHHHhccCCCcC-ccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHhhhhHHH
Confidence 555555555553 244444 444455555554443222 2344555555555 677777788888888888888888
Q ss_pred HHHHHh-chhhhccccCCCCCCCcchhcc
Q 036326 197 RNLVDN-MLASSLMNEGDAKGKSNVHFFA 224 (225)
Q Consensus 197 ~~Ll~~-g~~~~~~~~~d~~g~tpl~~a~ 224 (225)
++|++. |++ ++.+|.+|+||||+|+
T Consensus 256 ~~Ll~~~~~~---vn~~d~~G~TpL~~A~ 281 (337)
T 4g8k_A 256 QRLLEQEHIE---INDTDSDGKTALLLAV 281 (337)
T ss_dssp HHHHTSTTCC---TTCBCTTSCBHHHHHH
T ss_pred HHHHHhcCCc---ccCcCCCCCCHHHHHH
Confidence 888775 677 7777888888888876
No 53
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=1.8e-31 Score=199.72 Aligned_cols=164 Identities=20% Similarity=0.176 Sum_probs=153.6
Q ss_pred cCcCCCChHHHHHHHcCCcHHHHHHHHhhCCccccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhcccc
Q 036326 20 ISQSQIDPNLFKATAAGNSEPFKDMAREICPSLLLQVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVG 99 (225)
Q Consensus 20 ~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~ 99 (225)
..+..|.||||.|+..|+.+++++|++.+.. .++..+..|.|| ||+|+..|+.+++++|++.|++++
T Consensus 53 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~-~~~~~~~~g~t~-L~~A~~~~~~~~~~~Ll~~g~~~~----------- 119 (223)
T 2f8y_A 53 IQDNMGRTPLHAAVSADAQGVFQILIRNRAT-DLDARMHDGTTP-LILAARLAVEGMLEDLINSHADVN----------- 119 (223)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHBTTS-CTTCCCTTCCCH-HHHHHHHTCHHHHHHHHHTTCCTT-----------
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCcH-HHHHHHhCcHHHHHHHHHcCCCCc-----------
Confidence 3456789999999999999999999976642 477789999999 999999999999999999999998
Q ss_pred cchhhhhcccccCccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCccccccCc
Q 036326 100 ASRQTIRMTNQVKHTALHQAVFHITVDVVKILTREDPDYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVDNW 179 (225)
Q Consensus 100 ~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~ 179 (225)
.++..|.||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+..|+.+++++|+++|++ ++.++..
T Consensus 120 -------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~ 190 (223)
T 2f8y_A 120 -------AVDDLGKSALHWAAAVNNVDAAVVLLKNGANKD-MQNNREETPLFLAAREGSYETAKVLLDHFAN-RDITDHM 190 (223)
T ss_dssp -------CBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTT
T ss_pred -------CcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCcCHHHHHHHcCCHHHHHHHHHcCCC-Ccccccc
Confidence 778899999999999999999999999999988 7889999999999999999999999999998 9999999
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhchh
Q 036326 180 GWNFLHYAVFSFEVEELRNLVDNMLA 205 (225)
Q Consensus 180 ~~t~l~~a~~~~~~~~~~~Ll~~g~~ 205 (225)
|.||+++|+..++.+++++|+++|+.
T Consensus 191 g~t~l~~A~~~~~~~i~~~L~~~g~~ 216 (223)
T 2f8y_A 191 DRLPRDIAQERMHHDIVRLLDEYNLV 216 (223)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCS
T ss_pred CCCHHHHHHHhcchHHHHHHHHcCCC
Confidence 99999999999999999999999977
No 54
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=100.00 E-value=1.1e-31 Score=189.75 Aligned_cols=151 Identities=20% Similarity=0.251 Sum_probs=141.7
Q ss_pred CChHHHHHHHcCCcHHHHHHHHhhCCccccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhcccccchhh
Q 036326 25 IDPNLFKATAAGNSEPFKDMAREICPSLLLQVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGASRQT 104 (225)
Q Consensus 25 ~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~ 104 (225)
..++|+.|++.|+.+++++|++.+.+. ..+..|.|| ||+|+..|+.+++++|++.|++++
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~---~~~~~g~t~-L~~A~~~~~~~~v~~Ll~~g~~~~---------------- 61 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPF---TTDWLGTSP-LHLAAQYGHFSTTEVLLRAGVSRD---------------- 61 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCC---CCCTTCCCH-HHHHHHHTCHHHHHHHHTTTCCTT----------------
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCC---CcCCCCCCH-HHHHHHcCCHHHHHHHHHcCCCCC----------------
Confidence 358999999999999999999887643 268889999 999999999999999999999988
Q ss_pred hhcccccCccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCccccccCcCCcHH
Q 036326 105 IRMTNQVKHTALHQAVFHITVDVVKILTREDPDYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVDNWGWNFL 184 (225)
Q Consensus 105 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~t~l 184 (225)
.++..|.||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+..|+.+++++|+++|++ ++.++..|.|||
T Consensus 62 --~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l 137 (153)
T 1awc_B 62 --ARTKVDRTPLHMAASEGHANIVEVLLKHGADVN-AKDMLKMTALHWATEHNHQEVVELLIKYGAD-VHTQSKFCKTAF 137 (153)
T ss_dssp --CCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHH
T ss_pred --CCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccCCCCCCHH
Confidence 788899999999999999999999999999988 7888999999999999999999999999988 999999999999
Q ss_pred HHHHHcCCHHHHHHH
Q 036326 185 HYAVFSFEVEELRNL 199 (225)
Q Consensus 185 ~~a~~~~~~~~~~~L 199 (225)
|+|+..|+.+++++|
T Consensus 138 ~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 138 DISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHHTTCHHHHHHH
T ss_pred HHHHHcCCHHHHHHh
Confidence 999999999999987
No 55
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=8.5e-32 Score=213.64 Aligned_cols=202 Identities=16% Similarity=0.119 Sum_probs=164.3
Q ss_pred ccCCcccC---cCCCChHHHHHHHcCCcHHHHHHHHhhCCc-------------------------------cccccCCC
Q 036326 14 LDNNGEIS---QSQIDPNLFKATAAGNSEPFKDMAREICPS-------------------------------LLLQVNAK 59 (225)
Q Consensus 14 ~~~~~~~~---~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~-------------------------------~~~~~~~~ 59 (225)
++++..+. ...|+||||.|++.|+.+++++|++++... .++..|..
T Consensus 45 L~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 124 (337)
T 4g8k_A 45 LEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFLSKGADVNECDFY 124 (337)
T ss_dssp HHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCBCTT
T ss_pred HHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcccchhhHHhhhccchhhhhccC
Confidence 34454443 235899999999999999999999876532 35567889
Q ss_pred CCCHHHHHHHhcCcHHHHHHHHhcCccCccchh-------hhhcccccch------------h-------hhhcccccCc
Q 036326 60 GDSRSLLNATKFGHCDIASVLIERAKLVEHEDE-------ELESGVGASR------------Q-------TIRMTNQVKH 113 (225)
Q Consensus 60 g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~-------~~~~~~~~~~------------~-------~~~~~~~~g~ 113 (225)
|.|| ||+|+..|+.+++++|++.|++++.... ....|.++++ . .++.++..|.
T Consensus 125 g~t~-l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~ 203 (337)
T 4g8k_A 125 GFTA-FMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGR 203 (337)
T ss_dssp CCBH-HHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSC
T ss_pred CCCH-HHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCC
Confidence 9999 9999999999999999999998874331 1223444432 2 2345678899
Q ss_pred cHHHHHHHcCC----HHHHHHHHhcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCccccccCcCCcHHHHHHH
Q 036326 114 TALHQAVFHIT----VDVVKILTREDPDYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVDNWGWNFLHYAVF 189 (225)
Q Consensus 114 t~L~~A~~~g~----~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~ 189 (225)
|+++.++..+. ..++++|++.|++++ ..+..|.||||+|+..|+.+++++|+...+.+++.+|..|+||||+|+.
T Consensus 204 t~l~~~~~~~~~~~~~~i~~lLl~~gad~n-~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~ 282 (337)
T 4g8k_A 204 NALIHALLSSDDSDVEAITHLLLDHGADVN-VRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVE 282 (337)
T ss_dssp CHHHHHHHHSCTTTHHHHHHHHHHTTCCTT-CCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHH
T ss_pred cHHHHHHHHcCcccHHHHHHHHHHCCCCCC-CcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHH
Confidence 99998877654 358899999999988 7888999999999999999999999987544599999999999999999
Q ss_pred cCCHHHHHHHHHhchhhhccccCCCCCCCcchhccC
Q 036326 190 SFEVEELRNLVDNMLASSLMNEGDAKGKSNVHFFAA 225 (225)
Q Consensus 190 ~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~a~~ 225 (225)
.|+.+++++|+++|++ ++. .+|||+|++
T Consensus 283 ~g~~~iv~~Ll~~GAd---~n~-----~~~L~~A~~ 310 (337)
T 4g8k_A 283 LKLKKIAELLCKRGAS---TDC-----GDLVMTARR 310 (337)
T ss_dssp TTCHHHHHHHHTTSCS---STT-----CCHHHHHHH
T ss_pred cCCHHHHHHHHHCCCC---CCC-----CCHHHHHHH
Confidence 9999999999999999 554 469999863
No 56
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=1.3e-32 Score=213.75 Aligned_cols=175 Identities=13% Similarity=0.096 Sum_probs=158.0
Q ss_pred cccCCcccCcCCCChHHHHHHHcCCcHHHHHHHHhhCCccccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchh
Q 036326 13 LLDNNGEISQSQIDPNLFKATAAGNSEPFKDMAREICPSLLLQVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDE 92 (225)
Q Consensus 13 l~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~ 92 (225)
|++.+..+...+|.||||.|+..|+.+++++|++.+. +++.++..|.|| ||+|+..|+.+++++|+++|++++
T Consensus 50 Ll~~g~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga--~~~~~d~~g~t~-L~~A~~~g~~~~v~~Ll~~ga~~~---- 122 (285)
T 3kea_A 50 LLNAGALKNLLENEFPLHQAATLEDTKIVKILLFSGL--DDSQFDDKGNTA-LYYAVDSGNMQTVKLFVKKNWRLM---- 122 (285)
T ss_dssp HHHTTGGGSCCTTCCHHHHHTTSSSCHHHHHHHHTTC--CTTCCCTTSCCH-HHHHHHTTCHHHHHHHHHHCGGGG----
T ss_pred HHhCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCC--CCCCcCCCCCcH-HHHHHHcCCHHHHHHHHhcCCCCC----
Confidence 3445566666679999999999999999999998876 477799999999 999999999999999999999998
Q ss_pred hhhcccccchhhhhcccccC-ccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCC
Q 036326 93 ELESGVGASRQTIRMTNQVK-HTALHQAVFHITVDVVKILTREDPDYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPE 171 (225)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~g-~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~ 171 (225)
.++..| .||||+|+..|+.+++++|++.|++.. ....|.||||+|+..|+.+++++|+++|++
T Consensus 123 --------------~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad 186 (285)
T 3kea_A 123 --------------FYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTF--DLAILLSCIHITIKNGHVDMMILLLDYMTS 186 (285)
T ss_dssp --------------GCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTC--CCSTHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred --------------ccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccc--cccCCccHHHHHHHcChHHHHHHHHHcCCC
Confidence 778888 799999999999999999999998764 223899999999999999999999999987
Q ss_pred ccccccCcCCcH-HHHHHHcCCHHHHHHHHHhchhhhccccCCC
Q 036326 172 CYELVDNWGWNF-LHYAVFSFEVEELRNLVDNMLASSLMNEGDA 214 (225)
Q Consensus 172 ~~~~~~~~~~t~-l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~ 214 (225)
++.++..|+|| ||+|+..|+.+++++|+++|++ ++.+|.
T Consensus 187 -~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad---~~~~~~ 226 (285)
T 3kea_A 187 -TNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDIN---IYSANL 226 (285)
T ss_dssp -TCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBC---STTTTG
T ss_pred -CCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCC---CCCCCh
Confidence 99999999998 9999999999999999999999 666653
No 57
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=5.5e-32 Score=204.24 Aligned_cols=179 Identities=18% Similarity=0.243 Sum_probs=162.7
Q ss_pred cCCCChHHHHHHHcCCcHHHHHHHHhhCCccccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhcccccc
Q 036326 22 QSQIDPNLFKATAAGNSEPFKDMAREICPSLLLQVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGAS 101 (225)
Q Consensus 22 ~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~ 101 (225)
+..+.++|+.|++.|+.+.+++|++.+. +++..+..|.|| ||+|+..|+.+++++|++.|.+++.
T Consensus 6 d~~~~~~l~~A~~~g~~~~~~~Ll~~g~--~~~~~~~~g~t~-L~~A~~~~~~~~v~~Ll~~~~~~~~------------ 70 (240)
T 3eu9_A 6 DDYSTWDIVKATQYGIYERCRELVEAGY--DVRQPDKENVTL-LHWAAINNRIDLVKYYISKGAIVDQ------------ 70 (240)
T ss_dssp SCGGGCCHHHHHHTTCHHHHHHHHHTTC--CTTCCCTTSCCH-HHHHHHTTCHHHHHHHHHTTCCTTC------------
T ss_pred ccccchHHHHHHHcCChHHHHHHHHcCC--CcCCCCCCCCCH-HHHHHHhCCHHHHHHHHHcCCcchh------------
Confidence 3457789999999999999999998775 477889999999 9999999999999999999998771
Q ss_pred hhhhhcccccCccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCccccccCcCC
Q 036326 102 RQTIRMTNQVKHTALHQAVFHITVDVVKILTREDPDYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVDNWGW 181 (225)
Q Consensus 102 ~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~ 181 (225)
..+..|.||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+..|+.+++++|+++++. ++.++..|.
T Consensus 71 -----~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~-~~~~~~~g~ 143 (240)
T 3eu9_A 71 -----LGGDLNSTPLHWATRQGHLSMVVQLMKYGADPS-LIDGEGCSCIHLAAQFGHTSIVAYLIAKGQD-VDMMDQNGM 143 (240)
T ss_dssp -----CBTTTTBCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSC
T ss_pred -----hcCCcCCChhHHHHHcCCHHHHHHHHHcCCCCc-ccCCCCCCHHHHHHHcCHHHHHHHHHhcCCC-ccccCCCCC
Confidence 334568999999999999999999999999987 7888999999999999999999999999987 999999999
Q ss_pred cHHHHHHHcCC-HHHHHHHHHhchhhhccccCCC-CCCCcchhccC
Q 036326 182 NFLHYAVFSFE-VEELRNLVDNMLASSLMNEGDA-KGKSNVHFFAA 225 (225)
Q Consensus 182 t~l~~a~~~~~-~~~~~~Ll~~g~~~~~~~~~d~-~g~tpl~~a~~ 225 (225)
||||+|+..++ .+++++|++.|++ ++..+. .|.||||+|++
T Consensus 144 t~l~~a~~~~~~~~~~~~L~~~~~~---~~~~~~~~g~t~L~~A~~ 186 (240)
T 3eu9_A 144 TPLMWAAYRTHSVDPTRLLLTFNVS---VNLGDKYHKNTALHWAVL 186 (240)
T ss_dssp CHHHHHHHHCCSSTTHHHHHHTTCC---TTCCCTTTCCCHHHHHHH
T ss_pred cHHHHHHHhCChHHHHHHHHhcCCC---cchhhccCCCcHHHHHHH
Confidence 99999997766 8999999999999 888886 89999999873
No 58
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=1.9e-31 Score=196.51 Aligned_cols=161 Identities=20% Similarity=0.169 Sum_probs=148.6
Q ss_pred cCcCCCChHHHHHHHcCCcHHHHHHHHhhCCccccccCCCCCCHHHHHHHhcCcHHHHHHHH-hcCccCccchhhhhccc
Q 036326 20 ISQSQIDPNLFKATAAGNSEPFKDMAREICPSLLLQVNAKGDSRSLLNATKFGHCDIASVLI-ERAKLVEHEDEELESGV 98 (225)
Q Consensus 20 ~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll-~~~~~~~~~~~~~~~~~ 98 (225)
..+..|.||||.|++.|+.+++++|++.+. +++..+..|.|| ||+|+..|+.+++++|+ ..+.+++
T Consensus 34 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~--~~~~~~~~g~t~-l~~A~~~~~~~~~~~Ll~~~~~~~~---------- 100 (201)
T 3hra_A 34 EVDTEGNTPLNIAVHNNDIEIAKALIDRGA--DINLQNSISDSP-YLYAGAQGRTEILAYMLKHATPDLN---------- 100 (201)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHTTC--CTTCCCTTSCCH-HHHHHHTTCHHHHHHHHHHSCCCTT----------
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcCC--CCCCCCCCCCCH-HHHHHHcCCHHHHHHHHhccCcccc----------
Confidence 345678999999999999999999998876 477799999999 99999999999999999 4566777
Q ss_pred ccchhhhhcccccCccHHHHHHHcCCHHHHHHHHhcC-CCCCCCCCCCCCcHHHHHHHcCC-----HHHHHHHHhhCCCc
Q 036326 99 GASRQTIRMTNQVKHTALHQAVFHITVDVVKILTRED-PDYPYSANNYSKTPLCMAAEYKD-----ARVVEAIISRNPEC 172 (225)
Q Consensus 99 ~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~-~~~~~~~~~~~~t~l~~a~~~g~-----~~~~~~Ll~~~~~~ 172 (225)
.++..|.||||+|+..|+.+++++|++.| .+++ ..+..|.||||+|+..++ .+++++|+++|++
T Consensus 101 --------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~- 170 (201)
T 3hra_A 101 --------KHNRYGGNALIPAAEKGHIDNVKLLLEDGREDID-FQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGAD- 170 (201)
T ss_dssp --------CCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTT-CCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCC-
T ss_pred --------cccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcC-CCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCC-
Confidence 77889999999999999999999999999 6766 788899999999999998 9999999999988
Q ss_pred cccccCcCCcHHHHHHHcCCHHHHHHHHHhc
Q 036326 173 YELVDNWGWNFLHYAVFSFEVEELRNLVDNM 203 (225)
Q Consensus 173 ~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g 203 (225)
++.++..|.||||+|+..|+.+++++|+++|
T Consensus 171 ~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 171 QSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred CCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 9999999999999999999999999999987
No 59
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=100.00 E-value=4.5e-32 Score=198.78 Aligned_cols=149 Identities=16% Similarity=0.075 Sum_probs=141.9
Q ss_pred cccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhcccccchhhhhcccccCccHHHHHHHcCCHHHHHHH
Q 036326 52 LLLQVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGASRQTIRMTNQVKHTALHQAVFHITVDVVKIL 131 (225)
Q Consensus 52 ~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~L 131 (225)
.++.+|..|.|| ||+|+..|+.+++++|++.|.+++ .++..|.||||+|+..|+.+++++|
T Consensus 27 ~~n~~d~~g~t~-L~~A~~~g~~~~v~~Ll~~~~~~~------------------~~~~~g~t~L~~A~~~~~~~~v~~L 87 (192)
T 2rfm_A 27 LRNYRDSYNRTP-LMVACMLGMENAIDKLVENFDKLE------------------DKDIEGSTALIWAVKNNRLGIAEKL 87 (192)
T ss_dssp HHTCCCTTCCCH-HHHHHHHTCGGGHHHHHHHHCCTT------------------CCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHhCcCCCCCCH-HHHHHHcCCHHHHHHHHHhccccc------------------cccccCccHHHHHHHcCCHHHHHHH
Confidence 456789999999 999999999999999999999988 7788999999999999999999999
Q ss_pred HhcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCccccccCcCCcHHHHHHHcCCHHHHHHHHHhchhhhcccc
Q 036326 132 TREDPDYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVDNWGWNFLHYAVFSFEVEELRNLVDNMLASSLMNE 211 (225)
Q Consensus 132 l~~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~ 211 (225)
++.|++++ ..+..|.||||+|+..|+.+++++|+++|++ ++.++..|.||||+|+..|+.+++++|+++|++ ++.
T Consensus 88 l~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~---~~~ 162 (192)
T 2rfm_A 88 LSKGSNVN-TKDFSGKTPLMWSIIFGYSEMSYFLLEHGAN-VNDRNLEGETPLIVASKYGRSEIVKKLLELGAD---ISA 162 (192)
T ss_dssp HHHTCCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC---TTC
T ss_pred HHCCCCCC-CCCCCCCcHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC---CCC
Confidence 99999987 7888999999999999999999999999988 999999999999999999999999999999999 888
Q ss_pred CCCCCCCcchhcc
Q 036326 212 GDAKGKSNVHFFA 224 (225)
Q Consensus 212 ~d~~g~tpl~~a~ 224 (225)
+|..|.||+|+|+
T Consensus 163 ~~~~g~t~l~~A~ 175 (192)
T 2rfm_A 163 RDLTGLTAEASAR 175 (192)
T ss_dssp BCTTSCBHHHHHH
T ss_pred cCCCCCCHHHHHH
Confidence 8999999999986
No 60
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.98 E-value=6.8e-32 Score=206.68 Aligned_cols=163 Identities=18% Similarity=0.171 Sum_probs=146.8
Q ss_pred CCCChHHHHHH---HcCCcHHHHHHHHhhCC---------ccccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccc
Q 036326 23 SQIDPNLFKAT---AAGNSEPFKDMAREICP---------SLLLQVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHE 90 (225)
Q Consensus 23 ~~~~~~L~~A~---~~g~~~~v~~Ll~~~~~---------~~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~ 90 (225)
..|.||||.|+ +.|+.+++++|+..+.. ......|..|.|| ||+|+..|+.+++++|++.|++++
T Consensus 44 ~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~-L~~A~~~g~~~~v~~Ll~~ga~~~-- 120 (260)
T 3jxi_A 44 STGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTA-LHIAIERRCKHYVELLVEKGADVH-- 120 (260)
T ss_dssp TTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCH-HHHHHHTTCHHHHHHHHHTTCCTT--
T ss_pred CCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCH-HHHHHHcCCHHHHHHHHhCCCCcC--
Confidence 55999999999 77999999999987632 2344556689999 999999999999999999999998
Q ss_pred hhhhhcccccchhhhhccc--------------ccCccHHHHHHHcCCHHHHHHHHh---cCCCCCCCCCCCCCcHHHHH
Q 036326 91 DEELESGVGASRQTIRMTN--------------QVKHTALHQAVFHITVDVVKILTR---EDPDYPYSANNYSKTPLCMA 153 (225)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~--------------~~g~t~L~~A~~~g~~~~v~~Ll~---~~~~~~~~~~~~~~t~l~~a 153 (225)
.++ ..|.||||+|+..|+.+++++|++ .|++++ ..+..|.||||+|
T Consensus 121 ----------------~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~-~~d~~g~TpLh~A 183 (260)
T 3jxi_A 121 ----------------AQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLR-RQDSRGNTVLHAL 183 (260)
T ss_dssp ----------------CCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTT-CCCTTSCCHHHHH
T ss_pred ----------------ccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCc-ccCCCCCcHHHHH
Confidence 444 579999999999999999999999 899988 7899999999999
Q ss_pred HHcCC---------HHHHHHHHhhCCCcc-------ccccCcCCcHHHHHHHcCCHHHHHHHHHhchhh
Q 036326 154 AEYKD---------ARVVEAIISRNPECY-------ELVDNWGWNFLHYAVFSFEVEELRNLVDNMLAS 206 (225)
Q Consensus 154 ~~~g~---------~~~~~~Ll~~~~~~~-------~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~ 206 (225)
+..++ .+++++|+++|++ + +.++..|+||||+|+..|+.+++++|+++|+++
T Consensus 184 ~~~~~~~~~~~~~~~~~v~~Ll~~ga~-~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~ 251 (260)
T 3jxi_A 184 VAIADNTRENTKFVTKMYDLLLIKCAK-LFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIAD 251 (260)
T ss_dssp HHHCCSSHHHHHHHHHHHHHHHHHHHH-HCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHhccCchhHHHHHHHHHHHHHHhCcc-cccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHHhCCCc
Confidence 99887 7999999999887 6 679999999999999999999999999999883
No 61
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.98 E-value=7.6e-32 Score=206.04 Aligned_cols=178 Identities=15% Similarity=0.079 Sum_probs=148.0
Q ss_pred CcCCCChHHHHHHHc---CCcHHHHHHHHhhCCcc---------ccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCc
Q 036326 21 SQSQIDPNLFKATAA---GNSEPFKDMAREICPSL---------LLQVNAKGDSRSLLNATKFGHCDIASVLIERAKLVE 88 (225)
Q Consensus 21 ~~~~~~~~L~~A~~~---g~~~~v~~Ll~~~~~~~---------~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~ 88 (225)
....|+||||.|+.. |+.+++++|++.+.... ....|..|.|| ||+|+..|+.+++++|++.|++++
T Consensus 39 ~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~-L~~A~~~g~~~~v~~Ll~~ga~~~ 117 (256)
T 2etb_A 39 EGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSA-LHIAIEKRSLQCVKLLVENGADVH 117 (256)
T ss_dssp BTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCH-HHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred CCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCH-HHHHHHcCCHHHHHHHHHcCCCCC
Confidence 356799999999999 99999999998765321 11244779999 999999999999999999999998
Q ss_pred cchhhhhcccccchhhhhcccccCccHHHHHHHcCCHHHHHHHHh---cCCCCCCCCCCCCCcHHHHHHH--cCCHH---
Q 036326 89 HEDEELESGVGASRQTIRMTNQVKHTALHQAVFHITVDVVKILTR---EDPDYPYSANNYSKTPLCMAAE--YKDAR--- 160 (225)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~---~~~~~~~~~~~~~~t~l~~a~~--~g~~~--- 160 (225)
..+..... ....+..+..|.||||+|+..|+.+++++|++ .|++++ ..+..|.||||+|+. .++.+
T Consensus 118 ~~~~~~~~-----~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n-~~d~~g~TpLh~A~~~~~~~~~~~~ 191 (256)
T 2etb_A 118 LRACGRFF-----QKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLE-ATDSLGNTVLHALVMIADNSPENSA 191 (256)
T ss_dssp CCCCSGGG-----SCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTT-CCCTTSCCHHHHHHHHCCSCHHHHH
T ss_pred cccccccc-----cccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcC-ccCCCCCCHHHHHHHcccCCchhhH
Confidence 32211000 00000111239999999999999999999999 899988 789999999999999 78888
Q ss_pred ----HHHHHHhhCCCcc-------ccccCcCCcHHHHHHHcCCHHHHHHHHHhchhh
Q 036326 161 ----VVEAIISRNPECY-------ELVDNWGWNFLHYAVFSFEVEELRNLVDNMLAS 206 (225)
Q Consensus 161 ----~~~~Ll~~~~~~~-------~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~ 206 (225)
++++|+++|++ + +.+|..|+||||+|+..|+.+++++|+++|+++
T Consensus 192 ~~~~iv~~Ll~~ga~-~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~ 247 (256)
T 2etb_A 192 LVIHMYDGLLQMGAR-LCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREFSG 247 (256)
T ss_dssp HHHHHHHHHHHHHHH-HSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCC-cccccccccccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCC
Confidence 99999999987 7 889999999999999999999999999999883
No 62
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.98 E-value=2.1e-32 Score=207.30 Aligned_cols=178 Identities=16% Similarity=0.077 Sum_probs=131.7
Q ss_pred CCCChHHHHHHHcCCcHHHHHHHHhhCCccccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhcccccch
Q 036326 23 SQIDPNLFKATAAGNSEPFKDMAREICPSLLLQVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGASR 102 (225)
Q Consensus 23 ~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~ 102 (225)
..|.||||.|++.|+.+.++.|++++.... .+..|.|| ||+|+..|+.+++++|++.|++++
T Consensus 3 ~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~---~~~~~~t~-L~~A~~~g~~~~v~~Ll~~g~~~~-------------- 64 (239)
T 1ycs_B 3 ITGQVSLPPGKRTNLRKTGSERIAHGMRVK---FNPLPLAL-LLDSSLEGEFDLVQRIIYEVDDPS-------------- 64 (239)
T ss_dssp -------------------------------------CHHH-HHHHHHHTCHHHHHHHTSTTSSCC--------------
T ss_pred ccccccCchhhhhhhHHHHHHHhccCCCcc---cCchhhHH-HHHHHHcCCHHHHHHHHHcCCCCC--------------
Confidence 458999999999999999999998887533 34678999 999999999999999999999998
Q ss_pred hhhhcccccCccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCccccccCcCC-
Q 036326 103 QTIRMTNQVKHTALHQAVFHITVDVVKILTREDPDYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVDNWGW- 181 (225)
Q Consensus 103 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~- 181 (225)
.++..|.||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+..|+.+++++|+++|++ ++.++..|.
T Consensus 65 ----~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~~~~ 138 (239)
T 1ycs_B 65 ----LPNDEGITALHNAVCAGHTEIVKFLVQFGVNVN-AADSDGWTPLHCAASCNNVQVCKFLVESGAA-VFAMTYSDMQ 138 (239)
T ss_dssp ----CCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCSSSCC
T ss_pred ----CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-cceecCCCCc
Confidence 788999999999999999999999999999988 7888999999999999999999999999998 888888877
Q ss_pred cHHHHH--HHcCCHHHHHHHHHhchhhhccccC------CCCCCCcchhcc
Q 036326 182 NFLHYA--VFSFEVEELRNLVDNMLASSLMNEG------DAKGKSNVHFFA 224 (225)
Q Consensus 182 t~l~~a--~~~~~~~~~~~Ll~~g~~~~~~~~~------d~~g~tpl~~a~ 224 (225)
||||+| +..|+.+++++|+++|++++..+.. |..+.+|.+++.
T Consensus 139 t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~~~~~~~al~d~~~~~~~eLa~ 189 (239)
T 1ycs_B 139 TAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDELPM 189 (239)
T ss_dssp CHHHHCCSSSTTCCCHHHHHHHHHHHTTTTGGGEEEESSCBCCSSTTBCCB
T ss_pred chHHHHHHhhhccHHHHHHHHHhhhcccccccceEEEEeccCCCCCCcccc
Confidence 999999 7889999999999999995543322 777888888765
No 63
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.97 E-value=3.2e-31 Score=190.01 Aligned_cols=142 Identities=17% Similarity=0.155 Sum_probs=135.8
Q ss_pred CCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhcccccchhhhhcccccCccHHHHHHHcCCHHHHHHHHhcCCCC
Q 036326 59 KGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGASRQTIRMTNQVKHTALHQAVFHITVDVVKILTREDPDY 138 (225)
Q Consensus 59 ~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~ 138 (225)
.|.|| ||+|+..|+.+++++|++.+.+++ .++..|.||||+|+..|+.+++++|++.|+++
T Consensus 2 ~~~t~-L~~A~~~g~~~~v~~ll~~~~~~~------------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 62 (167)
T 3v31_A 2 ANSLS-VHQLAAQGEMLYLATRIEQENVIN------------------HTDEEGFTPLMWAAAHGQIAVVEFLLQNGADP 62 (167)
T ss_dssp TTCCC-HHHHHHTTCHHHHHHHHHHSSCTT------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred CCcch-HHHHHHCCCHHHHHHHHHcCCCcC------------------CCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC
Confidence 57899 999999999999999999999888 78899999999999999999999999999998
Q ss_pred CCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCccccccCcCCcHHHHHHHcCCHHHHHHHHHhchhhhccccCCCCCCC
Q 036326 139 PYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVDNWGWNFLHYAVFSFEVEELRNLVDNMLASSLMNEGDAKGKS 218 (225)
Q Consensus 139 ~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~t 218 (225)
+ ..+..|.||||+|+..|+.+++++|++++++ ++.++..|.||||+|+..|+.+++++|+++|++ ++.+|..|.|
T Consensus 63 ~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t 137 (167)
T 3v31_A 63 Q-LLGKGRESALSLACSKGYTDIVKMLLDCGVD-VNEYDWNGGTPLLYAVHGNHVKCVKMLLESGAD---PTIETDSGYN 137 (167)
T ss_dssp T-CCCTTCCCHHHHHHHHTCHHHHHHHHHHTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCC
T ss_pred C-CcCCCCCcHHHHHHHcCCHHHHHHHHHCCCC-CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CCCcCCCCCC
Confidence 7 7888999999999999999999999999988 999999999999999999999999999999999 8888999999
Q ss_pred cchhcc
Q 036326 219 NVHFFA 224 (225)
Q Consensus 219 pl~~a~ 224 (225)
|+|+|+
T Consensus 138 ~l~~A~ 143 (167)
T 3v31_A 138 SMDLAV 143 (167)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999986
No 64
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.97 E-value=7.1e-31 Score=203.01 Aligned_cols=163 Identities=21% Similarity=0.154 Sum_probs=150.8
Q ss_pred ccCcCCCChHHHHHHHcCCcHHHHHHHHhhCCccccccCCCCCCHHHHHHH-----hcCcHHHHHHHHhcCccCccchhh
Q 036326 19 EISQSQIDPNLFKATAAGNSEPFKDMAREICPSLLLQVNAKGDSRSLLNAT-----KFGHCDIASVLIERAKLVEHEDEE 93 (225)
Q Consensus 19 ~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~~lh~a~-----~~g~~~~~~~Ll~~~~~~~~~~~~ 93 (225)
+..+..|+||||.|+..|+.+++++|+..+.. .++..+..|.|| ||+|+ ..++.+++++|++.|...+
T Consensus 105 n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~-~~~~~~~~g~tp-L~~a~~~~~~~~~~~~~v~~Ll~~g~~~~----- 177 (276)
T 4hbd_A 105 NIADSNGNTALHYSVSHANFPVVQQLLDSGVC-KVDKQNRAGYSP-IMLTALATLKTQDDIETVLQLFRLGNINA----- 177 (276)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCC-CTTCCCTTSCCH-HHHGGGCCCCSHHHHHHHHHHHHHSCTTC-----
T ss_pred cCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCC-cCCCCCCCCCCH-HHHHHHHHhhhhhhHHHHHHHHHcCCCcc-----
Confidence 44567799999999999999999999987752 477899999999 99999 6688999999999998877
Q ss_pred hhcccccchhhhhcccccCccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHh-hCCCc
Q 036326 94 LESGVGASRQTIRMTNQVKHTALHQAVFHITVDVVKILTREDPDYPYSANNYSKTPLCMAAEYKDARVVEAIIS-RNPEC 172 (225)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~-~~~~~ 172 (225)
..+..|.||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+..|+.+++++|++ .|++
T Consensus 178 -------------~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n-~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad- 242 (276)
T 4hbd_A 178 -------------KASQAGQTALMLAVSHGRVDVVKALLACEADVN-VQDDDGSTALMCACEHGHKEIAGLLLAVPSCD- 242 (276)
T ss_dssp -------------CCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCC-
T ss_pred -------------ccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCC-CCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCC-
Confidence 678889999999999999999999999999988 789999999999999999999999999 7776
Q ss_pred cccccCcCCcHHHHHHHcCCHHHHHHHHHhc
Q 036326 173 YELVDNWGWNFLHYAVFSFEVEELRNLVDNM 203 (225)
Q Consensus 173 ~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g 203 (225)
++.+|..|.||||+|+..|+.+++++|++++
T Consensus 243 ~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 243 ISLTDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred CcCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 9999999999999999999999999999986
No 65
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.97 E-value=4e-33 Score=209.97 Aligned_cols=178 Identities=15% Similarity=0.023 Sum_probs=156.7
Q ss_pred cCCCChHHHHHHHcCCcHHHHHHHHhhCCccccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhcccccc
Q 036326 22 QSQIDPNLFKATAAGNSEPFKDMAREICPSLLLQVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGAS 101 (225)
Q Consensus 22 ~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~ 101 (225)
...+.||||.|+..|+.+++++|++.+. +++..|..|.|| ||+|+..|+.+++++|++.|++++
T Consensus 18 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~--~~~~~d~~g~tp-Lh~A~~~g~~~~v~~Ll~~ga~~n------------- 81 (229)
T 2vge_A 18 RLNPLVLLLDAALTGELEVVQQAVKEMN--DPSQPNEEGITA-LHNAICGANYSIVDFLITAGANVN------------- 81 (229)
T ss_dssp TSCHHHHHHHHHHHTCHHHHHHHHHHSS--CTTCCCTTSCCH-HHHHHHTTCHHHHHHHHHTTCCTT-------------
T ss_pred ccchhHHHHHHHHcCCHHHHHHHHhcCC--CCCCCCCCCCCH-HHHHHHcCCHHHHHHHHHCCCCCC-------------
Confidence 4456789999999999999999998876 477899999999 999999999999999999999998
Q ss_pred hhhhhcccccCccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCcHHHHH--HHcCCHHHHHHHHhhCCCccccccCc
Q 036326 102 RQTIRMTNQVKHTALHQAVFHITVDVVKILTREDPDYPYSANNYSKTPLCMA--AEYKDARVVEAIISRNPECYELVDNW 179 (225)
Q Consensus 102 ~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a--~~~g~~~~~~~Ll~~~~~~~~~~~~~ 179 (225)
.++..|.||||+|+..|+.+++++|++.|++++...+..|.||||+| +..|+.+++++|++.|++ ++.++..
T Consensus 82 -----~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~-~~~~~~~ 155 (229)
T 2vge_A 82 -----SPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQS-MGLMNSG 155 (229)
T ss_dssp -----CCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHH-TTTSGGG
T ss_pred -----CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCC-cccccCC
Confidence 78899999999999999999999999999999844457999999999 999999999999999987 9999999
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhchhhhccccCCCCCCCcchhccC
Q 036326 180 GWNFLHYAVFSFEVEELRNLVDNMLASSLMNEGDAKGKSNVHFFAA 225 (225)
Q Consensus 180 ~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~a~~ 225 (225)
+.||++.++... ..++|++.|+++ .++.+|..|+||||+|++
T Consensus 156 ~~~~l~~~~~~~---~~~~ll~~ga~~-~~~~~d~~G~TpL~~A~~ 197 (229)
T 2vge_A 156 AVYALWDYSAEF---GDELSFREGESV-TVLRRDGPEETDWWWAAL 197 (229)
T ss_dssp EEEESSCBCCSS---TTBCCBCTTCEE-EEEESSCTTCSSEEEEEE
T ss_pred chHHHHHHhhcc---ccccCccccccc-cccccCCCcccHHHHHHH
Confidence 999988655443 336788888772 246789999999999974
No 66
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.97 E-value=9.5e-31 Score=188.01 Aligned_cols=145 Identities=23% Similarity=0.310 Sum_probs=135.6
Q ss_pred cCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhcccccchhhhhcccccCccHHHHHHHcCCHHHHHHHHhcC
Q 036326 56 VNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGASRQTIRMTNQVKHTALHQAVFHITVDVVKILTRED 135 (225)
Q Consensus 56 ~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~ 135 (225)
....+.++ |++|+..|+.+++++|++.|++++ .++..|.||||+|+..|+.+++++|++.|
T Consensus 10 ~~~~~~~~-l~~A~~~g~~~~v~~Ll~~g~~~~------------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 70 (169)
T 2y1l_E 10 HGSDLGKK-LLEAARAGRDDEVRILMANGADVN------------------AEDASGWTPLHLAAFNGHLEIVEVLLKNG 70 (169)
T ss_dssp ---CHHHH-HHHHHHHTCHHHHHHHHHTTCCTT------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCCcccch-HHHHHHcCCHHHHHHHHHCCCCCC------------------CCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 34556788 999999999999999999999998 78889999999999999999999999999
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCccccccCcCCcHHHHHHHcCCHHHHHHHHHhchhhhccccCCCC
Q 036326 136 PDYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVDNWGWNFLHYAVFSFEVEELRNLVDNMLASSLMNEGDAK 215 (225)
Q Consensus 136 ~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~ 215 (225)
++++ ..+..|.||||+|+..|+.+++++|+++|++ ++.++..|.||||+|+..|+.+++++|+++|++ ++.+|..
T Consensus 71 ~~~~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~ 145 (169)
T 2y1l_E 71 ADVN-AVDHAGMTPLRLAALFGHLEIVEVLLKNGAD-VNANDMEGHTPLHLAAMFGHLEIVEVLLKNGAD---VNAQDKF 145 (169)
T ss_dssp CCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTT
T ss_pred CCCC-ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CCCcCCC
Confidence 9987 7888999999999999999999999999988 999999999999999999999999999999999 8889999
Q ss_pred CCCcchhcc
Q 036326 216 GKSNVHFFA 224 (225)
Q Consensus 216 g~tpl~~a~ 224 (225)
|.||+|+|+
T Consensus 146 g~t~l~~A~ 154 (169)
T 2y1l_E 146 GKTAFDISI 154 (169)
T ss_dssp SCCHHHHHH
T ss_pred CCCHHHHHH
Confidence 999999986
No 67
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.97 E-value=9.5e-31 Score=184.98 Aligned_cols=139 Identities=20% Similarity=0.224 Sum_probs=131.6
Q ss_pred CCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhcccccchhhhhcccccCccHHHHHHHcCCHHHHHHHHhcCCCCCC
Q 036326 61 DSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGASRQTIRMTNQVKHTALHQAVFHITVDVVKILTREDPDYPY 140 (225)
Q Consensus 61 ~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~ 140 (225)
.++ ||.|+..|+.+++++|++.|.+++ .+..|.||||+|+..|+.+++++|++.|++++
T Consensus 3 ~~~-L~~A~~~g~~~~v~~Ll~~g~~~~-------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~- 61 (153)
T 1awc_B 3 GKK-LLEAARAGQDDEVRILMANGAPFT-------------------TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRD- 61 (153)
T ss_dssp HHH-HHHHHHHTCHHHHHHHHHHTCCCC-------------------CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTT-
T ss_pred cHH-HHHHHHcCCHHHHHHHHHcCCCCC-------------------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-
Confidence 568 999999999999999999998766 47789999999999999999999999999987
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCccccccCcCCcHHHHHHHcCCHHHHHHHHHhchhhhccccCCCCCCCcc
Q 036326 141 SANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVDNWGWNFLHYAVFSFEVEELRNLVDNMLASSLMNEGDAKGKSNV 220 (225)
Q Consensus 141 ~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl 220 (225)
..+..|.||||+|+..|+.+++++|+++|++ ++.++..|+||||+|+..|+.+++++|+++|++ ++.+|..|.||+
T Consensus 62 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~t~l 137 (153)
T 1awc_B 62 ARTKVDRTPLHMAASEGHANIVEVLLKHGAD-VNAKDMLKMTALHWATEHNHQEVVELLIKYGAD---VHTQSKFCKTAF 137 (153)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHTTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHH
T ss_pred CCCCCCCCHHHHHHHcChHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---ccccCCCCCCHH
Confidence 7888999999999999999999999999988 999999999999999999999999999999999 888999999999
Q ss_pred hhcc
Q 036326 221 HFFA 224 (225)
Q Consensus 221 ~~a~ 224 (225)
|+|+
T Consensus 138 ~~A~ 141 (153)
T 1awc_B 138 DISI 141 (153)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9986
No 68
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.97 E-value=1.8e-30 Score=200.63 Aligned_cols=167 Identities=22% Similarity=0.148 Sum_probs=133.4
Q ss_pred ccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhcccccch------------------hhhhcccccCcc
Q 036326 53 LLQVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGASR------------------QTIRMTNQVKHT 114 (225)
Q Consensus 53 ~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~g~t 114 (225)
++.+|..|.|| ||+|+..|+.+++++|++.|.+++..+.....|.++++ ..++.++..|.|
T Consensus 2 ~~~~d~~g~t~-L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t 80 (282)
T 1oy3_D 2 FGYVTEDGDTA-LHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHT 80 (282)
T ss_dssp CCCCCTTCCCH-HHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCC
T ss_pred CCccCCCCCcH-HHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCC
Confidence 45689999999 99999999999999999999884433344445555554 112355667888
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCC-----------------------------------------------CCCCCCCCCC
Q 036326 115 ALHQAVFHITVDVVKILTREDPD-----------------------------------------------YPYSANNYSK 147 (225)
Q Consensus 115 ~L~~A~~~g~~~~v~~Ll~~~~~-----------------------------------------------~~~~~~~~~~ 147 (225)
|||+|+..|+.+++++|++.++. ++ ..+..|.
T Consensus 81 pL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~ 159 (282)
T 1oy3_D 81 ALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLE-AENYDGH 159 (282)
T ss_dssp HHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTT-CCCTTSC
T ss_pred HHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCC-CcCCCCc
Confidence 88888888888888888877654 22 4566788
Q ss_pred cHHHHHHHcCCHHHHHHHHhhCCCccccccCc-CCcHHHHHHHcCCHHHHHHHHHhchhhhccccCCCCCCCcchhccC
Q 036326 148 TPLCMAAEYKDARVVEAIISRNPECYELVDNW-GWNFLHYAVFSFEVEELRNLVDNMLASSLMNEGDAKGKSNVHFFAA 225 (225)
Q Consensus 148 t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~-~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~a~~ 225 (225)
||||+|+..|+.+++++|+++|++ ++.++.. |+||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|++
T Consensus 160 t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad---~~~~d~~g~tpL~~A~~ 234 (282)
T 1oy3_D 160 TPLHVAVIHKDAEMVRLLRDAGAD-LNKPEPTCGRTPLHLAVEAQAASVLELLLKAGAD---PTARMYGGRTPLGSALL 234 (282)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHT
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCC---CcccccCCCCHHHHHHH
Confidence 899999999999999999998887 7777754 89999999999999999999999998 78888899999998864
No 69
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.97 E-value=2.5e-30 Score=186.22 Aligned_cols=142 Identities=16% Similarity=0.141 Sum_probs=132.5
Q ss_pred CCCHHHHHHHhcCcHHHHHHHHhcCcc-CccchhhhhcccccchhhhhcccccCccHHHHHHHcCCHHHHHHHHhcCCCC
Q 036326 60 GDSRSLLNATKFGHCDIASVLIERAKL-VEHEDEELESGVGASRQTIRMTNQVKHTALHQAVFHITVDVVKILTREDPDY 138 (225)
Q Consensus 60 g~t~~lh~a~~~g~~~~~~~Ll~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~ 138 (225)
+.+| ||.|+..|+.++++.|++.+.. ++ .++..|.||||+|+..|+.+++++|++.|+++
T Consensus 2 ~~~~-L~~A~~~g~~~~v~~ll~~~~~~~~------------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 62 (172)
T 3v30_A 2 DSLS-IHQLAAQGELDQLKEHLRKGDNLVN------------------KPDERGFTPLIWASAFGEIETVRFLLEWGADP 62 (172)
T ss_dssp --CC-HHHHHHTTCHHHHHHHHTTCSGGGG------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT
T ss_pred chhh-HHHHHHcCCHHHHHHHHHcCccccc------------------CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc
Confidence 3678 9999999999999999998876 45 77889999999999999999999999999998
Q ss_pred CCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCccccccCcCCcHHHHHHHcCCHHHHHHHHHhchhhhccccCCCCCCC
Q 036326 139 PYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVDNWGWNFLHYAVFSFEVEELRNLVDNMLASSLMNEGDAKGKS 218 (225)
Q Consensus 139 ~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~t 218 (225)
+ ..+..|.||||+|+..|+.+++++|++++++ ++.++..|+||||+|+..|+.+++++|+++|++ ++.+|..|.|
T Consensus 63 ~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~t 137 (172)
T 3v30_A 63 H-ILAKERESALSLASTGGYTDIVGLLLERDVD-INIYDWNGGTPLLYAVRGNHVKCVEALLARGAD---LTTEADSGYT 137 (172)
T ss_dssp T-CCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCC
T ss_pred h-hhcccCCCHHHHHHHCCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---ccccCCCCCC
Confidence 7 7888999999999999999999999999988 999999999999999999999999999999999 8889999999
Q ss_pred cchhccC
Q 036326 219 NVHFFAA 225 (225)
Q Consensus 219 pl~~a~~ 225 (225)
|||+|++
T Consensus 138 ~l~~A~~ 144 (172)
T 3v30_A 138 PMDLAVA 144 (172)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999863
No 70
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.97 E-value=2.1e-30 Score=185.33 Aligned_cols=146 Identities=21% Similarity=0.237 Sum_probs=133.7
Q ss_pred cCCCCCCHHHHHHHhcCcHHHHHHHHhc-CccCccchhhhhcccccchhhhhcccccCccHHHHHHHcCCHHHHHHHHhc
Q 036326 56 VNAKGDSRSLLNATKFGHCDIASVLIER-AKLVEHEDEELESGVGASRQTIRMTNQVKHTALHQAVFHITVDVVKILTRE 134 (225)
Q Consensus 56 ~~~~g~t~~lh~a~~~g~~~~~~~Ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 134 (225)
.+..|.++ ||.|+..|+.++++.|++. +.+++ ..+..|.||||+|+..|+.+++++|++.
T Consensus 4 ~~~~~~~~-l~~A~~~g~~~~v~~ll~~~~~~~~------------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 64 (165)
T 3twr_A 4 GNSEADRQ-LLEAAKAGDVETVKKLCTVQSVNCR------------------DIEGRQSTPLHFAAGYNRVSVVEYLLQH 64 (165)
T ss_dssp --CHHHHH-HHHHHHHTCHHHHHHHCCTTTTTCC------------------CTTTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CcchhhHH-HHHHHHhCCHHHHHHHHHcCCCCcc------------------ccccCCCCHHHHHHHcChHHHHHHHHhc
Confidence 46678899 9999999999999999984 44444 6677889999999999999999999999
Q ss_pred CCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCccccccCcCCcHHHHHHHcCCHHHHHHHHHhchhhhccccCCC
Q 036326 135 DPDYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVDNWGWNFLHYAVFSFEVEELRNLVDNMLASSLMNEGDA 214 (225)
Q Consensus 135 ~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~ 214 (225)
|++++ ..+..|.||||+|+..|+.+++++|++++++ ++.++..|+||||+|+..|+.+++++|+++|++ ++.+|.
T Consensus 65 g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~---~~~~~~ 139 (165)
T 3twr_A 65 GADVH-AKDKGGLVPLHNACSYGHYEVAELLVKHGAV-VNVADLWKFTPLHEAAAKGKYEICKLLLQHGAD---PTKKNR 139 (165)
T ss_dssp TCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCT
T ss_pred CCCCC-ccCCCCCCHHHHHHHcCcHHHHHHHHhCCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CcccCC
Confidence 99988 7888999999999999999999999999988 999999999999999999999999999999999 889999
Q ss_pred CCCCcchhccC
Q 036326 215 KGKSNVHFFAA 225 (225)
Q Consensus 215 ~g~tpl~~a~~ 225 (225)
.|+||+|+|++
T Consensus 140 ~g~t~l~~a~~ 150 (165)
T 3twr_A 140 DGNTPLDLVKD 150 (165)
T ss_dssp TSCCTGGGSCT
T ss_pred CCCChhHhHhc
Confidence 99999999864
No 71
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.97 E-value=6.7e-30 Score=185.20 Aligned_cols=143 Identities=18% Similarity=0.182 Sum_probs=132.2
Q ss_pred CCCCCHHHHHHHhcCcHHHHHHHHhc-CccCccchhhhhcccccchhhhhcccccCccHHHHHHHcCCHHHHHHHHhcCC
Q 036326 58 AKGDSRSLLNATKFGHCDIASVLIER-AKLVEHEDEELESGVGASRQTIRMTNQVKHTALHQAVFHITVDVVKILTREDP 136 (225)
Q Consensus 58 ~~g~t~~lh~a~~~g~~~~~~~Ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~ 136 (225)
..+.++ ||.|+..|+.+++++|++. +.+++ .++..|.||||+|+..|+.+++++|++.|+
T Consensus 3 ~~~~~~-l~~A~~~g~~~~v~~ll~~~~~~~~------------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 63 (179)
T 3f6q_A 3 PEFMDD-IFTQCREGNAVAVRLWLDNTENDLN------------------QGDDHGFSPLHWACREGRSAVVEMLIMRGA 63 (179)
T ss_dssp ----CC-HHHHHHHTCHHHHHHHHHCTTSCTT------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHH-HHHHHHcCCHHHHHHHHhcCccccc------------------ccCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 346788 9999999999999999997 55566 788899999999999999999999999999
Q ss_pred CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCccccccCcCCcHHHHHHHcCCHHHHHHHHHhchhhhccccCCCCC
Q 036326 137 DYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVDNWGWNFLHYAVFSFEVEELRNLVDNMLASSLMNEGDAKG 216 (225)
Q Consensus 137 ~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g 216 (225)
+++ ..+..|.||||+|+..|+.+++++|+++|++ ++.++..|.||||+|+..|+.+++++|+++|++ ++.+|..|
T Consensus 64 ~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~g 138 (179)
T 3f6q_A 64 RIN-VMNRGDDTPLHLAASHGHRDIVQKLLQYKAD-INAVNEHGNVPLHYACFWGQDQVAEDLVANGAL---VSICNKYG 138 (179)
T ss_dssp CTT-CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---SSBCCTTS
T ss_pred CCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCC---cchhccCC
Confidence 988 7888999999999999999999999999988 999999999999999999999999999999999 88999999
Q ss_pred CCcchhcc
Q 036326 217 KSNVHFFA 224 (225)
Q Consensus 217 ~tpl~~a~ 224 (225)
.||+++|+
T Consensus 139 ~tpl~~A~ 146 (179)
T 3f6q_A 139 EMPVDKAK 146 (179)
T ss_dssp CCGGGGSC
T ss_pred CCcHHHHH
Confidence 99999986
No 72
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.97 E-value=2.9e-30 Score=183.98 Aligned_cols=142 Identities=15% Similarity=0.112 Sum_probs=133.2
Q ss_pred CCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhcccccchhhhhcccccCccHHHHHHHcCCHHHHHHHHhcCCCC
Q 036326 59 KGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGASRQTIRMTNQVKHTALHQAVFHITVDVVKILTREDPDY 138 (225)
Q Consensus 59 ~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~ 138 (225)
...|| ||.|+..|+.+++++|++.|.+++ .++..|.||||+|+. |+.+++++|++.|+++
T Consensus 4 ~~~~~-L~~A~~~g~~~~v~~Ll~~~~~~~------------------~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~ 63 (162)
T 1ihb_A 4 PWGNE-LASAAARGDLEQLTSLLQNNVNVN------------------AQNGFGRTALQVMKL-GNPEIARRLLLRGANP 63 (162)
T ss_dssp -CHHH-HHHHHHHTCHHHHHHHTTSCCCTT------------------CCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCT
T ss_pred hHhhH-HHHHHHcCCHHHHHHHHhCCCCcc------------------ccCccCccHHHHHHc-CcHHHHHHHHHcCCCC
Confidence 34688 999999999999999999999988 788999999999999 9999999999999998
Q ss_pred CCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCccccccCcCCcHHHHHHHcCCHHHHHHHHHhchhhhccccCCCCCCC
Q 036326 139 PYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVDNWGWNFLHYAVFSFEVEELRNLVDNMLASSLMNEGDAKGKS 218 (225)
Q Consensus 139 ~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~t 218 (225)
+ ..+..|.||||+|+..|+.+++++|+++|++ ++.++..|+||||+|+..|+.+++++|+++|++ .++.+|..|.|
T Consensus 64 ~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~--~~~~~~~~g~t 139 (162)
T 1ihb_A 64 D-LKDRTGFAVIHDAARAGFLDTLQTLLEFQAD-VNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTAS--NVGHRNHKGDT 139 (162)
T ss_dssp T-CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCC--CTTCCCTTSCC
T ss_pred C-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCC--CCCCcCCCCCc
Confidence 7 7888999999999999999999999999987 999999999999999999999999999999987 25888999999
Q ss_pred cchhcc
Q 036326 219 NVHFFA 224 (225)
Q Consensus 219 pl~~a~ 224 (225)
|||+|+
T Consensus 140 ~l~~A~ 145 (162)
T 1ihb_A 140 ACDLAR 145 (162)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999986
No 73
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.97 E-value=1.9e-29 Score=190.34 Aligned_cols=164 Identities=23% Similarity=0.255 Sum_probs=123.8
Q ss_pred cccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhcccccch------------hh------hhcccccCc
Q 036326 52 LLLQVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGASR------------QT------IRMTNQVKH 113 (225)
Q Consensus 52 ~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~------------~~------~~~~~~~g~ 113 (225)
+++..+..|.|| ||+|+..|+.+++++|++.|++++..+ ..+.+++. .+ ++.++..|.
T Consensus 3 ~~~~~~~~g~t~-L~~A~~~g~~~~v~~Ll~~g~~~~~~~---~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 78 (237)
T 3b7b_A 3 NFKMEHQNKRSP-LHAAAEAGHVDICHMLVQAGANIDTCS---EDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGS 78 (237)
T ss_dssp CCCCSSCCSCCH-HHHHHHHTCHHHHHHHHHTTCCTTCCC---TTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSC
T ss_pred CcccccCCCCCH-HHHHHHcCcHHHHHHHHHcCCCcCccC---CCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCC
Confidence 466789999999 999999999999999999999988433 22333332 11 234556677
Q ss_pred cHHHHHHHcCCHHHHHHHHhcC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCccccccCcCCcHHHHHHHcCC
Q 036326 114 TALHQAVFHITVDVVKILTRED-PDYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVDNWGWNFLHYAVFSFE 192 (225)
Q Consensus 114 t~L~~A~~~g~~~~v~~Ll~~~-~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~ 192 (225)
||||+|+..|+.+++++|++.+ .+++ ..+..|.||||+|+..|+.+++++|+++|++ ++.++..|.||||+|+..|+
T Consensus 79 t~L~~A~~~~~~~~~~~Ll~~~~~~~~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~ 156 (237)
T 3b7b_A 79 TCLHLAAKKGHYEVVQYLLSNGQMDVN-CQDDGGWTPMIWATEYKHVDLVKLLLSKGSD-INIRDNEENICLHWAAFSGC 156 (237)
T ss_dssp CHHHHHHHTTCHHHHHHHHTTTCCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHCC
T ss_pred cHHHHHHHcCCHHHHHHHHhCCCCCcc-cCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCccCCCCCCHHHHHHHCCC
Confidence 7777777777777777777777 4444 5666777788888877788888888877776 77777778888888888888
Q ss_pred HHHHHHHHHhchhhhccccCCCCCCCcchhcc
Q 036326 193 VEELRNLVDNMLASSLMNEGDAKGKSNVHFFA 224 (225)
Q Consensus 193 ~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~a~ 224 (225)
.+++++|+++|++ ++.+|..|.||||+|+
T Consensus 157 ~~~~~~Ll~~g~~---~~~~~~~g~t~L~~A~ 185 (237)
T 3b7b_A 157 VDIAEILLAAKCD---LHAVNIHGDSPLHIAA 185 (237)
T ss_dssp HHHHHHHHTTTCC---TTCCCTTCCCHHHHHH
T ss_pred HHHHHHHHHcCCC---CCCcCCCCCCHHHHHH
Confidence 8888888888877 6777777888888775
No 74
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.97 E-value=3.9e-30 Score=182.44 Aligned_cols=146 Identities=13% Similarity=0.041 Sum_probs=115.0
Q ss_pred ccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhcccccchhhhhcccccCccHHHHHHHcCCHHHHHHHH
Q 036326 53 LLQVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGASRQTIRMTNQVKHTALHQAVFHITVDVVKILT 132 (225)
Q Consensus 53 ~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll 132 (225)
....+..|.|| ||+|+..|+.+++++|++.|++++ .++..|.||||+|+ .|+.+++++|+
T Consensus 5 ~~~~~~~~~t~-L~~A~~~g~~~~v~~Ll~~g~~~~------------------~~~~~g~t~L~~A~-~~~~~~v~~Ll 64 (156)
T 1bi7_B 5 AGSSMEPSADW-LATAAARGRVEEVRALLEAGANPN------------------APNSYGRRPIQVMM-MGSARVAELLL 64 (156)
T ss_dssp -----CCSTTH-HHHHHHHTCHHHHHHHHTTTCCTT------------------CCCSSSCCTTTSSC-TTCHHHHHHHH
T ss_pred ccCCCccchHH-HHHHHHcCCHHHHHHHHHcCCCCC------------------CCCCCCCCHHHHHH-cCCHHHHHHHH
Confidence 34467788999 999999999999999999999888 77889999999985 89999999999
Q ss_pred hcCCCCCCCCCCCCCc-HHHHHHHcCCHHHHHHHHhhCCCccccccCcCCcHHHHHHHcCCHHHHHHHHHhchhhhcccc
Q 036326 133 REDPDYPYSANNYSKT-PLCMAAEYKDARVVEAIISRNPECYELVDNWGWNFLHYAVFSFEVEELRNLVDNMLASSLMNE 211 (225)
Q Consensus 133 ~~~~~~~~~~~~~~~t-~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~ 211 (225)
+.|++++ ..+..|.| |||+|+..|+.+++++|+++|++ ++.++..|+||||+|+..|+.+++++|+++|++ ++.
T Consensus 65 ~~g~~~~-~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~---~~~ 139 (156)
T 1bi7_B 65 LHGAEPN-CADPATLTRPVHDAAREGFLDTLVVLHRAGAR-LDVRDAWGRLPVDLAEELGHRDVARYLRAAAGG---TRG 139 (156)
T ss_dssp TTTCCCC-CCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC--------
T ss_pred HcCCCCC-CcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCC---CCc
Confidence 9999987 78888998 99999999999999999999887 999999999999999999999999999999999 888
Q ss_pred CCCCCCCcchhc
Q 036326 212 GDAKGKSNVHFF 223 (225)
Q Consensus 212 ~d~~g~tpl~~a 223 (225)
+|..|.||.+.+
T Consensus 140 ~~~~g~t~~~~~ 151 (156)
T 1bi7_B 140 SNHARIDAAEGP 151 (156)
T ss_dssp ------------
T ss_pred cCcCcCcccccC
Confidence 888998887644
No 75
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.96 E-value=1.4e-29 Score=175.59 Aligned_cols=132 Identities=14% Similarity=0.117 Sum_probs=123.7
Q ss_pred cccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhcccccchhhhhcccccCccHHHHHHHcCCHHHHHHH
Q 036326 52 LLLQVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGASRQTIRMTNQVKHTALHQAVFHITVDVVKIL 131 (225)
Q Consensus 52 ~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~L 131 (225)
+++..+..|.|| ||+|+..|+.+++++|++.|++++ .++..|.||||+|+. |+.+++++|
T Consensus 4 ~~~~~~~~g~t~-L~~A~~~~~~~~v~~Ll~~g~~~~------------------~~~~~g~t~L~~A~~-~~~~~v~~L 63 (136)
T 1d9s_A 4 GIHMLGGSSDAG-LATAAARGQVETVRQLLEAGADPN------------------ALNRFGRRPIQVMMM-GSAQVAELL 63 (136)
T ss_dssp CCSCCCCCCSCH-HHHHHHTTCHHHHHHHHHTTCCTT------------------CCCTTCCTTTTTSTT-SCHHHHHHH
T ss_pred CccCCCCCCccH-HHHHHHcCCHHHHHHHHHcCCCcC------------------CcCCCCCCHHHHHHc-CCHHHHHHH
Confidence 577789999999 999999999999999999999988 788899999999999 999999999
Q ss_pred HhcCCCCCCCCCCC-CCcHHHHHHHcCCHHHHHHHHhhCCCccccccCcCCcHHHHHHHcCCHHHHHHHHHhchh
Q 036326 132 TREDPDYPYSANNY-SKTPLCMAAEYKDARVVEAIISRNPECYELVDNWGWNFLHYAVFSFEVEELRNLVDNMLA 205 (225)
Q Consensus 132 l~~~~~~~~~~~~~-~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~ 205 (225)
++.|++++ ..+.. |.||||+|+..|+.+++++|+++|++ ++.++..|.||||+|+..++.+++++|+++|+|
T Consensus 64 l~~g~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 64 LLHGAEPN-CADPATLTRPVHDAAREGFLDTLVVLHRAGAR-LDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp HHHTCCSS-CCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCC-CCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred HHCCCCCC-CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 99999987 67777 99999999999999999999999987 999999999999999999999999999999975
No 76
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.96 E-value=2e-29 Score=196.58 Aligned_cols=171 Identities=25% Similarity=0.213 Sum_probs=146.8
Q ss_pred HHHHcCCcHHHHHHHHhhCCcc-------ccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhcccccchh
Q 036326 31 KATAAGNSEPFKDMAREICPSL-------LLQVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGASRQ 103 (225)
Q Consensus 31 ~A~~~g~~~~v~~Ll~~~~~~~-------~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~ 103 (225)
.+++.+..+.++.++....... ....+..|.|| ||.||..|+.+++++|++.|++++
T Consensus 4 ~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~t~-l~~A~~~g~~~~v~~Ll~~g~~~~--------------- 67 (299)
T 1s70_B 4 ADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAV-FLAACSSGDTEEVLRLLERGADIN--------------- 67 (299)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSCCSCCCCSCCCCEECHHHH-HHHHHHHTCHHHHHHHHHHCCCTT---------------
T ss_pred hHHHHHHHHHHHHHHccccccccccccCcccccccCCccH-HHHHHHcCCHHHHHHHHHcCCCCc---------------
Confidence 4667777788888875543211 11123456799 999999999999999999999998
Q ss_pred hhhcccccCccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCcccccc------
Q 036326 104 TIRMTNQVKHTALHQAVFHITVDVVKILTREDPDYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVD------ 177 (225)
Q Consensus 104 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~------ 177 (225)
.++..|.||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+..|+.+++++|+++|++ ++.++
T Consensus 68 ---~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~ 142 (299)
T 1s70_B 68 ---YANVDGLTALHQACIDDNVDMVKFLVENGANIN-QPDNEGWIPLHAAASCGYLDIAEYLISQGAH-VGAVNSEGDTP 142 (299)
T ss_dssp ---CBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCH
T ss_pred ---ccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-CCCCCCCcHHHHHHHcCCHHHHHHHHhCCCC-CCCcCCCCCCH
Confidence 788899999999999999999999999999988 7888999999999999999999999999876 55444
Q ss_pred ------------------------------------------------------CcCCcHHHHHHHcCCHHHHHHHHHhc
Q 036326 178 ------------------------------------------------------NWGWNFLHYAVFSFEVEELRNLVDNM 203 (225)
Q Consensus 178 ------------------------------------------------------~~~~t~l~~a~~~~~~~~~~~Ll~~g 203 (225)
..|.||||+|+..|+.+++++|+++|
T Consensus 143 l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g 222 (299)
T 1s70_B 143 LDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQAR 222 (299)
T ss_dssp HHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTT
T ss_pred HHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcC
Confidence 35778999999999999999999999
Q ss_pred hhhhccccCCCCCCCcchhccC
Q 036326 204 LASSLMNEGDAKGKSNVHFFAA 225 (225)
Q Consensus 204 ~~~~~~~~~d~~g~tpl~~a~~ 225 (225)
++ ++.+|..|.||||+|++
T Consensus 223 ~d---~~~~d~~g~tpL~~A~~ 241 (299)
T 1s70_B 223 YD---VNIKDYDGWTPLHAAAH 241 (299)
T ss_dssp CC---TTCCCTTCCCHHHHHHH
T ss_pred CC---CCCcCCCCCcHHHHHHh
Confidence 99 88999999999999973
No 77
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.96 E-value=8.1e-30 Score=191.90 Aligned_cols=159 Identities=16% Similarity=0.113 Sum_probs=137.2
Q ss_pred HHHHHhhCC-ccccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhcccccchhhhhcccccCccHHHHHH
Q 036326 42 KDMAREICP-SLLLQVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGASRQTIRMTNQVKHTALHQAV 120 (225)
Q Consensus 42 ~~Ll~~~~~-~~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~ 120 (225)
+.|+..+.. ......+..+.|| ||+|+..|+.+++++|++.|++++ .++..|.||||+|+
T Consensus 2 ~~ll~~~~~~~~~~~~~~~~~t~-L~~A~~~g~~~~v~~Ll~~g~~~~------------------~~d~~g~tpLh~A~ 62 (229)
T 2vge_A 2 RSVLRKAGSPRKARRARLNPLVL-LLDAALTGELEVVQQAVKEMNDPS------------------QPNEEGITALHNAI 62 (229)
T ss_dssp --------CCCCCCCTTSCHHHH-HHHHHHHTCHHHHHHHHHHSSCTT------------------CCCTTSCCHHHHHH
T ss_pred eehhccCCCCccccccccchhHH-HHHHHHcCCHHHHHHHHhcCCCCC------------------CCCCCCCCHHHHHH
Confidence 456655543 2234456677888 999999999999999999999998 78899999999999
Q ss_pred HcCCHHHHHHHHhcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCcccccc-CcCCcHHHHH--HHcCCHHHHH
Q 036326 121 FHITVDVVKILTREDPDYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVD-NWGWNFLHYA--VFSFEVEELR 197 (225)
Q Consensus 121 ~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~-~~~~t~l~~a--~~~~~~~~~~ 197 (225)
..|+.+++++|++.|++++ ..+..|.||||+|+..|+.+++++|++.|++ ++.++ ..|+||||+| +..|+.++++
T Consensus 63 ~~g~~~~v~~Ll~~ga~~n-~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~g~tpL~~A~a~~~~~~~~v~ 140 (229)
T 2vge_A 63 CGANYSIVDFLITAGANVN-SPDSHGWTPLHCAASCNDTVICMALVQHGAA-IFATTLSDGATAFEKCDPYREGYADCAT 140 (229)
T ss_dssp HTTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC-TTCCCSSTTCCTGGGCCTTSTTHHHHHH
T ss_pred HcCCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-cccccCCCCCCHHHHHHHHhcChHHHHH
Confidence 9999999999999999988 7888999999999999999999999999998 78775 6999999999 9999999999
Q ss_pred HHHHhchhhhccccCCCCCCCcchhcc
Q 036326 198 NLVDNMLASSLMNEGDAKGKSNVHFFA 224 (225)
Q Consensus 198 ~Ll~~g~~~~~~~~~d~~g~tpl~~a~ 224 (225)
+|+++|++ ++.+|..|.||++.++
T Consensus 141 ~Ll~~ga~---~~~~~~~~~~~l~~~~ 164 (229)
T 2vge_A 141 YLADVEQS---MGLMNSGAVYALWDYS 164 (229)
T ss_dssp HHHHHHHH---TTTSGGGEEEESSCBC
T ss_pred HHHHcCCC---cccccCCchHHHHHHh
Confidence 99999999 8888889999998554
No 78
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.96 E-value=3.5e-29 Score=177.34 Aligned_cols=140 Identities=16% Similarity=0.171 Sum_probs=130.3
Q ss_pred CCCHHHHHHHhcCcHHHHHHHHhc-CccCccchhhhhcccccchhhhhcccccCccHHHHHHHcCCHHHHHHHHhcCCCC
Q 036326 60 GDSRSLLNATKFGHCDIASVLIER-AKLVEHEDEELESGVGASRQTIRMTNQVKHTALHQAVFHITVDVVKILTREDPDY 138 (225)
Q Consensus 60 g~t~~lh~a~~~g~~~~~~~Ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~ 138 (225)
+.|| ||+|+..|+.+++++|++. +.+++ .++..|.||||+ +..|+.+++++|++.|+++
T Consensus 2 ~~~~-L~~A~~~g~~~~v~~ll~~~~~~~~------------------~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~ 61 (156)
T 1bd8_A 2 AGDR-LSGAAARGDVQEVRRLLHRELVHPD------------------ALNRFGKTALQV-MMFGSTAIALELLKQGASP 61 (156)
T ss_dssp HHHH-HHHHHHHTCHHHHHHHHHTTCCCTT------------------CCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCT
T ss_pred cchH-HHHHHHhCCHHHHHHHHHhhCcCcc------------------ccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCC
Confidence 4578 9999999999999999998 33666 778899999999 9999999999999999998
Q ss_pred CCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCccccccCcCCcHHHHHHHcCCHHHHHHHHHhchhhhccccCCCCCCC
Q 036326 139 PYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVDNWGWNFLHYAVFSFEVEELRNLVDNMLASSLMNEGDAKGKS 218 (225)
Q Consensus 139 ~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~t 218 (225)
+ ..+..|.||||+|+..|+.+++++|+++|++ ++.++..|+||||+|+..|+.+++++|+++ ++ ++.+|..|.|
T Consensus 62 ~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~---~~~~~~~g~t 135 (156)
T 1bd8_A 62 N-VQDTSGTSPVHDAARTGFLDTLKVLVEHGAD-VNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SD---LHRRDARGLT 135 (156)
T ss_dssp T-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SC---TTCCCTTSCC
T ss_pred C-CcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cC---CCCcCCCCCC
Confidence 8 7888999999999999999999999999987 999999999999999999999999999999 88 8899999999
Q ss_pred cchhccC
Q 036326 219 NVHFFAA 225 (225)
Q Consensus 219 pl~~a~~ 225 (225)
|||+|++
T Consensus 136 ~l~~A~~ 142 (156)
T 1bd8_A 136 PLELALQ 142 (156)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999963
No 79
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.96 E-value=1.3e-29 Score=184.79 Aligned_cols=160 Identities=14% Similarity=0.126 Sum_probs=141.6
Q ss_pred ChHHHHHHHcCCcHHHHHHHHhhCCccccccC-CCCCCHHHHHHHhcCcH----HHHHHHHhcCccCccchhhhhccccc
Q 036326 26 DPNLFKATAAGNSEPFKDMAREICPSLLLQVN-AKGDSRSLLNATKFGHC----DIASVLIERAKLVEHEDEELESGVGA 100 (225)
Q Consensus 26 ~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~-~~g~t~~lh~a~~~g~~----~~~~~Ll~~~~~~~~~~~~~~~~~~~ 100 (225)
.++|+.|++.|+++.++.++..+. +..+ ..|.|| ||+|+..|+. +++++|+++|++++
T Consensus 7 ~~~l~~Aa~~g~~~~~~~l~~~~~----~~~~~~~g~T~-Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn------------ 69 (186)
T 3t8k_A 7 YRTVSAAAMLGTYEDFLELFEKGY----EDKESVLKSNI-LYDVLRNNNDEARYKISMFLINKGADIK------------ 69 (186)
T ss_dssp CSSHHHHHHHSCHHHHHHHHHHSS----SCHHHHHTTTH-HHHHTTCSCHHHHHHHHHHHHHTTCCSS------------
T ss_pred ccHHHHHHHcCCHHHHHHHHhcCc----ccccccCCCCH-HHHHHHcCCcchHHHHHHHHHHCCCCCC------------
Confidence 467999999999999999986543 3344 779999 9999999975 59999999999999
Q ss_pred chhhhhcccccCccHHHHHHHcCC------HHHHHHHHhcCCCCCCCCCCCCC-cHHHHHHHcC-----CHHHHHHHHh-
Q 036326 101 SRQTIRMTNQVKHTALHQAVFHIT------VDVVKILTREDPDYPYSANNYSK-TPLCMAAEYK-----DARVVEAIIS- 167 (225)
Q Consensus 101 ~~~~~~~~~~~g~t~L~~A~~~g~------~~~v~~Ll~~~~~~~~~~~~~~~-t~l~~a~~~g-----~~~~~~~Ll~- 167 (225)
.++..|.||||+|+..|+ .+++++|++.|++++ ..+..|. ||||+|+..+ ..+++++|++
T Consensus 70 ------~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin-~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~ 142 (186)
T 3t8k_A 70 ------SRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADIT-ALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQ 142 (186)
T ss_dssp ------CCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSS-SCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTS
T ss_pred ------CCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCC-ccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHh
Confidence 889999999999999987 578999999999998 8889999 9999999844 3569999999
Q ss_pred hCCCccccccCcCCcHHHHHHHcCCHHHHHHHHHhchhhhccccCC
Q 036326 168 RNPECYELVDNWGWNFLHYAVFSFEVEELRNLVDNMLASSLMNEGD 213 (225)
Q Consensus 168 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d 213 (225)
+|++ ++.+|..|.||||+|+..|+.+++++|.++... .+.++
T Consensus 143 ~gad-~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~~---~~~~~ 184 (186)
T 3t8k_A 143 SGLQ-LLIKDKWGLTALEFVKRCQKPIALKMMEDYIKK---YNLKE 184 (186)
T ss_dssp TTCC-TTCCCTTSCCHHHHHHTTTCHHHHHHHHHHHHH---HTCCC
T ss_pred cCCC-CcccCCCCCCHHHHHHHcCCHHHHHHHHHHHHH---Hhccc
Confidence 8887 999999999999999999999999999999876 56654
No 80
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.96 E-value=1.5e-27 Score=162.57 Aligned_cols=126 Identities=25% Similarity=0.319 Sum_probs=120.4
Q ss_pred CCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhcccccchhhhhcccccCccHHHHHHHcCCHHHHHHHHhcCCCC
Q 036326 59 KGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGASRQTIRMTNQVKHTALHQAVFHITVDVVKILTREDPDY 138 (225)
Q Consensus 59 ~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~ 138 (225)
+|.|| ||+|+..|+.+++++|++.|.+++ .++..|.||||+|+..|+.+++++|++.|+++
T Consensus 1 ~g~t~-L~~A~~~~~~~~v~~Ll~~~~~~~------------------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~ 61 (126)
T 1n0r_A 1 NGRTP-LHLAARNGHLEVVKLLLEAGADVN------------------AKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61 (126)
T ss_dssp CCCCH-HHHHHHHTCHHHHHHHHHHTCCTT------------------CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred CCccH-HHHHHHcCcHHHHHHHHHcCCCCC------------------CcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCC
Confidence 48899 999999999999999999999988 77889999999999999999999999999998
Q ss_pred CCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCccccccCcCCcHHHHHHHcCCHHHHHHHHHhchh
Q 036326 139 PYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVDNWGWNFLHYAVFSFEVEELRNLVDNMLA 205 (225)
Q Consensus 139 ~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~ 205 (225)
+ ..+..|.||||+|+..|+.+++++|+++|++ ++.++..|.||||+|+..|+.+++++|+++|++
T Consensus 62 ~-~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 62 N-AKDKNGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp T-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred c-ccCCCCCcHHHHHHHcChHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 7 7888999999999999999999999999988 999999999999999999999999999999985
No 81
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.95 E-value=2.2e-28 Score=185.20 Aligned_cols=141 Identities=18% Similarity=0.135 Sum_probs=102.5
Q ss_pred CCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhcccccchhhhhcccccCccHHHHHHHcCCHHHHHHHHhcCCC
Q 036326 58 AKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGASRQTIRMTNQVKHTALHQAVFHITVDVVKILTREDPD 137 (225)
Q Consensus 58 ~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~ 137 (225)
..|.|| ||.|+..++.+.++.|+++|++++ . +..|.||||+|+..|+.+++++|++.|++
T Consensus 3 ~~g~t~-L~~a~~~~~~~~~~~ll~~g~~~~------------------~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~ 62 (239)
T 1ycs_B 3 ITGQVS-LPPGKRTNLRKTGSERIAHGMRVK------------------F-NPLPLALLLDSSLEGEFDLVQRIIYEVDD 62 (239)
T ss_dssp ------------------------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSS
T ss_pred cccccc-CchhhhhhhHHHHHHHhccCCCcc------------------c-CchhhHHHHHHHHcCCHHHHHHHHHcCCC
Confidence 468999 999999999999999999999988 3 36789999999999999999999999999
Q ss_pred CCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCccccccCcCCcHHHHHHHcCCHHHHHHHHHhchhhhccccCCCCCC
Q 036326 138 YPYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVDNWGWNFLHYAVFSFEVEELRNLVDNMLASSLMNEGDAKGK 217 (225)
Q Consensus 138 ~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~ 217 (225)
++ ..+..|.||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|..|.
T Consensus 63 ~~-~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~~~ 137 (239)
T 1ycs_B 63 PS-LPNDEGITALHNAVCAGHTEIVKFLVQFGVN-VNAADSDGWTPLHCAASCNNVQVCKFLVESGAA---VFAMTYSDM 137 (239)
T ss_dssp CC-CCCTTSCCHHHHHHHHTCHHHHHHHHHHTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCSSSC
T ss_pred CC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---cceecCCCC
Confidence 87 7889999999999999999999999999988 999999999999999999999999999999999 888887776
Q ss_pred -Ccchhc
Q 036326 218 -SNVHFF 223 (225)
Q Consensus 218 -tpl~~a 223 (225)
||+|+|
T Consensus 138 ~t~l~~a 144 (239)
T 1ycs_B 138 QTAADKC 144 (239)
T ss_dssp CCHHHHC
T ss_pred cchHHHH
Confidence 999998
No 82
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.95 E-value=4.5e-28 Score=171.80 Aligned_cols=143 Identities=15% Similarity=0.119 Sum_probs=116.8
Q ss_pred CcCCCChHHHHHHHcCCcHHHHHHHHhhCCccccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhccccc
Q 036326 21 SQSQIDPNLFKATAAGNSEPFKDMAREICPSLLLQVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGA 100 (225)
Q Consensus 21 ~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~ 100 (225)
....+.||||.|++.|+.+++++|++.+. .++..+..|.|| ||+|+ .|+.+++++|+++|++++
T Consensus 8 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~--~~~~~~~~g~t~-L~~A~-~~~~~~v~~Ll~~g~~~~------------ 71 (156)
T 1bi7_B 8 SMEPSADWLATAAARGRVEEVRALLEAGA--NPNAPNSYGRRP-IQVMM-MGSARVAELLLLHGAEPN------------ 71 (156)
T ss_dssp --CCSTTHHHHHHHHTCHHHHHHHHTTTC--CTTCCCSSSCCT-TTSSC-TTCHHHHHHHHTTTCCCC------------
T ss_pred CCccchHHHHHHHHcCCHHHHHHHHHcCC--CCCCCCCCCCCH-HHHHH-cCCHHHHHHHHHcCCCCC------------
Confidence 35568999999999999999999998765 577899999999 99985 899999999999999998
Q ss_pred chhhhhcccccCcc-HHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCccccccCc
Q 036326 101 SRQTIRMTNQVKHT-ALHQAVFHITVDVVKILTREDPDYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVDNW 179 (225)
Q Consensus 101 ~~~~~~~~~~~g~t-~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~ 179 (225)
.++..|.| |||+|+..|+.+++++|++.|++++ ..+..|.||||+|+..|+.+++++|+++|++ ++.++..
T Consensus 72 ------~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~-~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~ 143 (156)
T 1bi7_B 72 ------CADPATLTRPVHDAAREGFLDTLVVLHRAGARLD-VRDAWGRLPVDLAEELGHRDVARYLRAAAGG-TRGSNHA 143 (156)
T ss_dssp ------CCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSS-CCCTTCCCHHHHHHHHTCHHHHHHHSSCC----------
T ss_pred ------CcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCCc-ccCCCCCCHHHHHHHhCHHHHHHHHHHcCCC-CCccCcC
Confidence 78889999 9999999999999999999999988 7888999999999999999999999999998 9999999
Q ss_pred CCcHHHHH
Q 036326 180 GWNFLHYA 187 (225)
Q Consensus 180 ~~t~l~~a 187 (225)
|.||.+.+
T Consensus 144 g~t~~~~~ 151 (156)
T 1bi7_B 144 RIDAAEGP 151 (156)
T ss_dssp --------
T ss_pred cCcccccC
Confidence 99998744
No 83
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.95 E-value=2.2e-27 Score=164.44 Aligned_cols=127 Identities=18% Similarity=0.220 Sum_probs=118.6
Q ss_pred cCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhcccccchhhhhcccccCccHHHHHHHcCCHHHHHHHHhcC
Q 036326 56 VNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGASRQTIRMTNQVKHTALHQAVFHITVDVVKILTRED 135 (225)
Q Consensus 56 ~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~ 135 (225)
....+.|| ||+|+..|+.+++++|++.|++++ .++..|.||||+|+..|+.+++++|++.|
T Consensus 10 ~~~~~~t~-l~~A~~~g~~~~v~~Ll~~g~~~~------------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 70 (136)
T 2jab_A 10 HGSDLGKK-LLEAARAGQDDEVRILMANGADVN------------------AKDEYGLTPLYLATAHGHLEIVEVLLKNG 70 (136)
T ss_dssp --CHHHHH-HHHHHHHTCHHHHHHHHHTTCCTT------------------CCCTTSCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred ccccccHH-HHHHHHhCCHHHHHHHHHcCCCCC------------------CcCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 44567889 999999999999999999999988 78899999999999999999999999999
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCccccccCcCCcHHHHHHHcCCHHHHHHHHHhc
Q 036326 136 PDYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVDNWGWNFLHYAVFSFEVEELRNLVDNM 203 (225)
Q Consensus 136 ~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g 203 (225)
++++ ..+..|.||||+|+..|+.+++++|+++|++ ++.++..|.||||+|+..|+.+++++|+++|
T Consensus 71 ~~~~-~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 71 ADVN-AVDAIGFTPLHLAAFIGHLEIAEVLLKHGAD-VNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp CCTT-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred CCCC-cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 9987 7888999999999999999999999999988 9999999999999999999999999999987
No 84
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.95 E-value=2.7e-27 Score=163.94 Aligned_cols=130 Identities=15% Similarity=0.192 Sum_probs=120.7
Q ss_pred ccCcCCCChHHHHHHHcCCcHHHHHHHHhhCCccccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhccc
Q 036326 19 EISQSQIDPNLFKATAAGNSEPFKDMAREICPSLLLQVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGV 98 (225)
Q Consensus 19 ~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~ 98 (225)
......|.||||.|++.|+.+++++|++.+. .++.++..|.|| ||+|+. |+.+++++|+++|++++
T Consensus 6 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~--~~~~~~~~g~t~-L~~A~~-~~~~~v~~Ll~~g~~~~---------- 71 (136)
T 1d9s_A 6 HMLGGSSDAGLATAAARGQVETVRQLLEAGA--DPNALNRFGRRP-IQVMMM-GSAQVAELLLLHGAEPN---------- 71 (136)
T ss_dssp SCCCCCCSCHHHHHHHTTCHHHHHHHHHTTC--CTTCCCTTCCTT-TTTSTT-SCHHHHHHHHHHTCCSS----------
T ss_pred cCCCCCCccHHHHHHHcCCHHHHHHHHHcCC--CcCCcCCCCCCH-HHHHHc-CCHHHHHHHHHCCCCCC----------
Confidence 4456678999999999999999999998875 577899999999 999999 99999999999999999
Q ss_pred ccchhhhhccccc-CccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCC
Q 036326 99 GASRQTIRMTNQV-KHTALHQAVFHITVDVVKILTREDPDYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPE 171 (225)
Q Consensus 99 ~~~~~~~~~~~~~-g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~ 171 (225)
.++.. |.||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+..++.+++++|+++|++
T Consensus 72 --------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 72 --------CADPATLTRPVHDAAREGFLDTLVVLHRAGARLD-VCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp --------CCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCC-CCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred --------CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 78888 9999999999999999999999999988 7888999999999999999999999998763
No 85
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.95 E-value=3.2e-28 Score=192.49 Aligned_cols=163 Identities=12% Similarity=0.060 Sum_probs=130.5
Q ss_pred HHHHHHcCCcHHHHHHHHhhCCccccc-cCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhcccccchhhhhc
Q 036326 29 LFKATAAGNSEPFKDMAREICPSLLLQ-VNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGASRQTIRM 107 (225)
Q Consensus 29 L~~A~~~g~~~~v~~Ll~~~~~~~~~~-~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (225)
+|.|+..+..++++.|+..+. +++. .|..|.|| ||+|+..|+.+++++|+++|++++ .
T Consensus 101 ~~~a~~~~~~~~~~~l~~~g~--dvn~~~d~~g~Tp-Lh~Aa~~g~~~~v~~Ll~~Gad~n------------------~ 159 (327)
T 1sw6_A 101 QHVSFDSLLQEVNDAFPNTQL--NLNIPVDEHGNTP-LHWLTSIANLELVKHLVKHGSNRL------------------Y 159 (327)
T ss_dssp ---CHHHHHHHHHHHCTTSCC--CSCSCCSTTCCCH-HHHHHHTTCHHHHHHHHHTTCCTT------------------B
T ss_pred hHHHHHhhHHHHHHHHHhcCC--CcccccCCCCCcH-HHHHHHcCCHHHHHHHHHcCCCCC------------------C
Confidence 477777777788888876655 5777 89999999 999999999999999999999999 8
Q ss_pred ccccCccHHHHHHHcCC---HHHHHHHHhcC-CCCCCCCCCCCCcHHHHHHH----cCCHHHHHHHHhh-----------
Q 036326 108 TNQVKHTALHQAVFHIT---VDVVKILTRED-PDYPYSANNYSKTPLCMAAE----YKDARVVEAIISR----------- 168 (225)
Q Consensus 108 ~~~~g~t~L~~A~~~g~---~~~v~~Ll~~~-~~~~~~~~~~~~t~l~~a~~----~g~~~~~~~Ll~~----------- 168 (225)
++..|.||||+|+..|+ .++++.|++.+ .+++ ..+..|+||||+|+. .|+.+++++|++.
T Consensus 160 ~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~-~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~ 238 (327)
T 1sw6_A 160 GDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLI-LEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNR 238 (327)
T ss_dssp CCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGG-EECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGC
T ss_pred cCCCCCCHHHHHHHhcccccHHHHHHHHHhhhcccc-CCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccch
Confidence 89999999999999998 57777777775 4555 788899999999999 8999999999987
Q ss_pred ---------CCCccccccCcCCcHHHHHHHcCCHHHHHHHHHhchhhhccccCCCCCCCcchhccC
Q 036326 169 ---------NPECYELVDNWGWNFLHYAVFSFEVEELRNLVDNMLASSLMNEGDAKGKSNVHFFAA 225 (225)
Q Consensus 169 ---------~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~a~~ 225 (225)
+++ ++.++..|.||||.|+. +++|+++ + ++.+|..|+||||+|++
T Consensus 239 ~i~~~~~~~g~~-~~~~~~~g~t~L~~a~~------~~~Ll~~--~---~n~~d~~G~TpLh~A~~ 292 (327)
T 1sw6_A 239 PIQSGTNEKESK-PNDKNGERKDSILENLD------LKWIIAN--M---LNAQDSNGDTCLNIAAR 292 (327)
T ss_dssp CEEEC-----------------CHHHHHCS------HHHHHHH--T---TTCCCTTSCCHHHHHHH
T ss_pred HHHhhhhcccCC-cccccccCCChhHHHHH------HHHHHHh--C---CCCCCCCCCCHHHHHHH
Confidence 555 89999999999999985 8999998 4 78899999999999973
No 86
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.94 E-value=1.4e-27 Score=174.05 Aligned_cols=140 Identities=11% Similarity=0.046 Sum_probs=124.8
Q ss_pred CCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhcccccchhhhhccc-ccCccHHHHHHHcCCH----HHHHHHHhc
Q 036326 60 GDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGASRQTIRMTN-QVKHTALHQAVFHITV----DVVKILTRE 134 (225)
Q Consensus 60 g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~t~L~~A~~~g~~----~~v~~Ll~~ 134 (225)
+.++ |+.|+..|+.+.++.++..+.+ .++ ..|.||||+|+..|+. +++++|++.
T Consensus 6 ~~~~-l~~Aa~~g~~~~~~~l~~~~~~--------------------~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~ 64 (186)
T 3t8k_A 6 EYRT-VSAAAMLGTYEDFLELFEKGYE--------------------DKESVLKSNILYDVLRNNNDEARYKISMFLINK 64 (186)
T ss_dssp HCSS-HHHHHHHSCHHHHHHHHHHSSS--------------------CHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHT
T ss_pred cccH-HHHHHHcCCHHHHHHHHhcCcc--------------------cccccCCCCHHHHHHHcCCcchHHHHHHHHHHC
Confidence 3577 9999999999999999987643 234 6799999999999975 589999999
Q ss_pred CCCCCCCCCCCCCcHHHHHHHcCC------HHHHHHHHhhCCCccccccCcCC-cHHHHHHHcC-----CHHHHHHHHH-
Q 036326 135 DPDYPYSANNYSKTPLCMAAEYKD------ARVVEAIISRNPECYELVDNWGW-NFLHYAVFSF-----EVEELRNLVD- 201 (225)
Q Consensus 135 ~~~~~~~~~~~~~t~l~~a~~~g~------~~~~~~Ll~~~~~~~~~~~~~~~-t~l~~a~~~~-----~~~~~~~Ll~- 201 (225)
|++++ ..+..|+||||+|+..++ .+++++|+++|++ ++.+|..|+ ||||+|+..+ +.+++++|++
T Consensus 65 Gadvn-~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gad-in~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~ 142 (186)
T 3t8k_A 65 GADIK-SRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGAD-ITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQ 142 (186)
T ss_dssp TCCSS-CCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCC-SSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTS
T ss_pred CCCCC-CCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCC-CCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHh
Confidence 99998 788999999999999887 5789999999998 999999999 9999999954 4579999999
Q ss_pred hchhhhccccCCCCCCCcchhccC
Q 036326 202 NMLASSLMNEGDAKGKSNVHFFAA 225 (225)
Q Consensus 202 ~g~~~~~~~~~d~~g~tpl~~a~~ 225 (225)
+|++ ++.+|..|+||||+|++
T Consensus 143 ~gad---~~~~d~~G~TpL~~A~~ 163 (186)
T 3t8k_A 143 SGLQ---LLIKDKWGLTALEFVKR 163 (186)
T ss_dssp TTCC---TTCCCTTSCCHHHHHHT
T ss_pred cCCC---CcccCCCCCCHHHHHHH
Confidence 9999 89999999999999974
No 87
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.94 E-value=6.9e-26 Score=154.28 Aligned_cols=126 Identities=23% Similarity=0.269 Sum_probs=118.2
Q ss_pred CCChHHHHHHHcCCcHHHHHHHHhhCCccccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhcccccchh
Q 036326 24 QIDPNLFKATAAGNSEPFKDMAREICPSLLLQVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGASRQ 103 (225)
Q Consensus 24 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~ 103 (225)
+|+||||.|++.|+.+++++|++.+. .++..+..|.|| ||+|+..++.+++++|++.|.+++
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~--~~~~~~~~g~t~-L~~A~~~~~~~~~~~Ll~~g~~~~--------------- 62 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGA--DVNAKDKNGRTP-LHLAARNGHLEVVKLLLEAGADVN--------------- 62 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTC--CTTCCCTTSCCH-HHHHHHHTCHHHHHHHHHTTCCTT---------------
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCC--CCCCcCCCCCcH-HHHHHHcCcHHHHHHHHHcCCCCc---------------
Confidence 47899999999999999999998866 477789999999 999999999999999999999988
Q ss_pred hhhcccccCccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCC
Q 036326 104 TIRMTNQVKHTALHQAVFHITVDVVKILTREDPDYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPE 171 (225)
Q Consensus 104 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~ 171 (225)
.++..|.||||+|+..|+.+++++|++.|++++ ..+..|.||+++|+..|+.+++++|+++|++
T Consensus 63 ---~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 63 ---AKDKNGRTPLHLAARNGHLEVVKLLLEAGADVN-AKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp ---CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred ---ccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCc-ccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 788899999999999999999999999999987 7888999999999999999999999999864
No 88
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.94 E-value=6.3e-26 Score=177.20 Aligned_cols=142 Identities=14% Similarity=0.014 Sum_probs=124.2
Q ss_pred CCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhcccccchhhhhcccccCccHHHHHHHc---CCHHHHHHHHhcCC
Q 036326 60 GDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGASRQTIRMTNQVKHTALHQAVFH---ITVDVVKILTREDP 136 (225)
Q Consensus 60 g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~---g~~~~v~~Ll~~~~ 136 (225)
..++ |+.|+..|+.+.++.|++.|++++.... ....+..|.||||+|+.. |+.+++++|++.|+
T Consensus 151 ~~~~-L~~A~~~g~~~~v~~ll~~g~d~~~~~~------------~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~ga 217 (301)
T 2b0o_E 151 EPQR-LWTAICNRDLLSVLEAFANGQDFGQPLP------------GPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGG 217 (301)
T ss_dssp CHHH-HHHHHHTTCHHHHHHHHHTTCCTTSCEE------------CSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSS
T ss_pred hHHH-HhhhhhccCHHHHHHHHhcCCcccccCC------------CcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCC
Confidence 4467 9999999999999999999999881100 000578899999999997 89999999999999
Q ss_pred CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCccccccCcCCcHHHHHHHcCCHHHHHHHHHhchhhhccccCCCCC
Q 036326 137 DYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVDNWGWNFLHYAVFSFEVEELRNLVDNMLASSLMNEGDAKG 216 (225)
Q Consensus 137 ~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g 216 (225)
+++ ..+..|.||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|+++|++ .|
T Consensus 218 dvn-~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad-~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~---------~g 286 (301)
T 2b0o_E 218 HLD-AKAADGNTALHYAALYNQPDCLKLLLKGRAL-VGTVNEAGETALDIARKKHHKECEELLEQAQAG---------TF 286 (301)
T ss_dssp CTT-CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-CSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH---------TT
T ss_pred CCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC---------CC
Confidence 988 7889999999999999999999999999998 999999999999999999999999999999988 57
Q ss_pred CCcchhccC
Q 036326 217 KSNVHFFAA 225 (225)
Q Consensus 217 ~tpl~~a~~ 225 (225)
.||||+|++
T Consensus 287 ~tpLh~A~~ 295 (301)
T 2b0o_E 287 AFPLHVDYS 295 (301)
T ss_dssp SSCCC----
T ss_pred CChhHHHHh
Confidence 899999974
No 89
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.94 E-value=2.9e-26 Score=158.75 Aligned_cols=126 Identities=21% Similarity=0.311 Sum_probs=116.6
Q ss_pred cCCCChHHHHHHHcCCcHHHHHHHHhhCCccccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhcccccc
Q 036326 22 QSQIDPNLFKATAAGNSEPFKDMAREICPSLLLQVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGAS 101 (225)
Q Consensus 22 ~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~ 101 (225)
...+.||||.|+..|+.+++++|++.+. +++..|..|.|| ||+|+..|+.+++++|++.|++++
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~--~~~~~~~~g~t~-L~~A~~~~~~~~v~~Ll~~g~~~~------------- 74 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANGA--DVNAKDEYGLTP-LYLATAHGHLEIVEVLLKNGADVN------------- 74 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTTC--CTTCCCTTSCCH-HHHHHHHTCHHHHHHHHHTTCCTT-------------
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcCC--CCCCcCCCCCCH-HHHHHHcCCHHHHHHHHHcCCCCC-------------
Confidence 3457899999999999999999998876 477899999999 999999999999999999999998
Q ss_pred hhhhhcccccCccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhC
Q 036326 102 RQTIRMTNQVKHTALHQAVFHITVDVVKILTREDPDYPYSANNYSKTPLCMAAEYKDARVVEAIISRN 169 (225)
Q Consensus 102 ~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~ 169 (225)
.++..|.||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+..|+.+++++|++.|
T Consensus 75 -----~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 75 -----AVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVN-AQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp -----CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred -----cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc-CcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 788899999999999999999999999999987 78889999999999999999999999864
No 90
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.94 E-value=6.5e-26 Score=157.11 Aligned_cols=114 Identities=21% Similarity=0.153 Sum_probs=108.3
Q ss_pred cccccCccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCccccccCcCCcHHHH
Q 036326 107 MTNQVKHTALHQAVFHITVDVVKILTREDPDYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVDNWGWNFLHY 186 (225)
Q Consensus 107 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~ 186 (225)
.++..|.||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+..|+.+++++|++++++ ++.++..|.||||+
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~ 82 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPN-VKDHAGWTPLHEACNHGHLKVVELLLQHKAL-VNTTGYQNDSPLHD 82 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSC-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCGGGCCHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCc-ccCcCCCCCCHHHH
Confidence 367889999999999999999999999999987 7888999999999999999999999999987 99999999999999
Q ss_pred HHHcCCHHHHHHHHHhchhhhccccCCCCCCCcchhccC
Q 036326 187 AVFSFEVEELRNLVDNMLASSLMNEGDAKGKSNVHFFAA 225 (225)
Q Consensus 187 a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~a~~ 225 (225)
|+..|+.+++++|+++|++ ++.+|..|.||+|+|++
T Consensus 83 A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~tpl~~A~~ 118 (137)
T 3c5r_A 83 AAKNGHVDIVKLLLSYGAS---RNAVNIFGLRPVDYTDD 118 (137)
T ss_dssp HHHTTCHHHHHHHHHTTCC---TTCCCTTSCCGGGGCCC
T ss_pred HHHcCCHHHHHHHHHcCCC---CCCCCCCCCCHHHHHhh
Confidence 9999999999999999999 88999999999999974
No 91
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.93 E-value=1.4e-26 Score=160.57 Aligned_cols=130 Identities=19% Similarity=0.184 Sum_probs=108.7
Q ss_pred ccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhcccccchhhhhcccccCccHHHHHHHcCCHHHHHHHHhc
Q 036326 55 QVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGASRQTIRMTNQVKHTALHQAVFHITVDVVKILTRE 134 (225)
Q Consensus 55 ~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 134 (225)
.+|..|.|| ||+|+..|+.+++++|++.|++++ .++..|.||||+|+..|+.+++++|++.
T Consensus 5 ~~~~~g~t~-L~~A~~~~~~~~~~~Ll~~g~~~~------------------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~ 65 (137)
T 3c5r_A 5 FTNHRGETL-LHIASIKGDIPSVEYLLQNGSDPN------------------VKDHAGWTPLHEACNHGHLKVVELLLQH 65 (137)
T ss_dssp CCCTTCCCH-HHHHHHHTCHHHHHHHHHTTCCSC------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CcCCCCCCH-HHHHHHcCCHHHHHHHHHcCCCCC------------------cCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 477888999 999999999999999999888888 7788888999999999999999999998
Q ss_pred CCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCccccccCcCCcHHHHHHHcCCHHHHHHHHHhchh
Q 036326 135 DPDYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVDNWGWNFLHYAVFSFEVEELRNLVDNMLA 205 (225)
Q Consensus 135 ~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~ 205 (225)
|++++ ..+..|.||||+|+..|+.+++++|+++|++ ++.++..|.||+++|+..+..+++++|.+.+..
T Consensus 66 g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~s 134 (137)
T 3c5r_A 66 KALVN-TTGYQNDSPLHDAAKNGHVDIVKLLLSYGAS-RNAVNIFGLRPVDYTDDESMKSLLLLPEKNESS 134 (137)
T ss_dssp TCCTT-CCCGGGCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCGGGGCCCHHHHHHHSCC------
T ss_pred CCccc-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHhhccHHHHHhhccccccC
Confidence 88877 6788888999999999999999999988887 888888999999999888888888887776643
No 92
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.93 E-value=1.2e-28 Score=197.68 Aligned_cols=161 Identities=13% Similarity=0.011 Sum_probs=131.0
Q ss_pred CCChHHHHHHHcCCcHHHHHHHHhhCCc-cccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhcccccch
Q 036326 24 QIDPNLFKATAAGNSEPFKDMAREICPS-LLLQVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGASR 102 (225)
Q Consensus 24 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~ 102 (225)
.++||||.|++.|+.+++++|++.+.+. .....+..|.|| ||+|+..|+.+++++|+++|+++...+
T Consensus 91 ~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tp-L~~Aa~~G~~eiv~~Ll~~gad~~~~~----------- 158 (376)
T 2aja_A 91 KSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQA-FRLAAENGHLHVLNRLCELAPTEIMAM----------- 158 (376)
T ss_dssp CHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHH-HHHHHHTTCHHHHHHHHHSCTTTHHHH-----------
T ss_pred CcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCH-HHHHHHcCCHHHHHHHHhCCCCccccc-----------
Confidence 3469999999999999999999877632 122345567889 999999999999999999997532110
Q ss_pred hhhhcccccCccHHHHHHHcCCHHHHHHHHhcCCCCCCC--CCCCCCcHHHHHH-HcCCHHHHHHHHhhCCCccccccCc
Q 036326 103 QTIRMTNQVKHTALHQAVFHITVDVVKILTREDPDYPYS--ANNYSKTPLCMAA-EYKDARVVEAIISRNPECYELVDNW 179 (225)
Q Consensus 103 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~--~~~~~~t~l~~a~-~~g~~~~~~~Ll~~~~~~~~~~~~~ 179 (225)
..+.. .||||+|+..|+.+++++|++.|++++ . .+..|.||||+|+ ..|+.+++++|++.|+ .
T Consensus 159 ----i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~-~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga--------~ 224 (376)
T 2aja_A 159 ----IQAEN-YHAFRLAAENGHLHVLNRLCELAPTEA-TAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV--------M 224 (376)
T ss_dssp ----HSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGH-HHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH--------H
T ss_pred ----cCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccc-hhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC--------c
Confidence 22223 899999999999999999999998865 3 5677999999999 9999999999998653 2
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhchhhhccccCC
Q 036326 180 GWNFLHYAVFSFEVEELRNLVDNMLASSLMNEGD 213 (225)
Q Consensus 180 ~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d 213 (225)
|.||||+|+..|+.+++++|+++|++ ++.+|
T Consensus 225 ~~taL~~Aa~~g~~evv~lL~~~ga~---~~~~~ 255 (376)
T 2aja_A 225 LAYAEIHEFEYGEKYVNPFIARHVNR---LKEMH 255 (376)
T ss_dssp HHHHHHCTTTTTTTTHHHHHHHHHHH---HHHHH
T ss_pred cchHHHHHHHCCCHHHHHHHHhcCcc---ccccc
Confidence 78999999999999999999999998 55443
No 93
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.93 E-value=6.2e-26 Score=172.28 Aligned_cols=143 Identities=17% Similarity=0.134 Sum_probs=128.5
Q ss_pred cCCCChHHHHHHHcCCcHHHHHHHHhhCCccccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhcccccc
Q 036326 22 QSQIDPNLFKATAAGNSEPFKDMAREICPSLLLQVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGAS 101 (225)
Q Consensus 22 ~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~ 101 (225)
+..|.||||.|++.|+.++++.|+. +. +++.+|..|.|| ||+|+..|+.+++++|+++|++++
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~--~~~~~d~~g~t~-L~~A~~~g~~~~v~~Ll~~ga~~~------------- 104 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE-DR--DVDAVDENGRTA-LLFVAGLGSDKCVRLLAEAGADLD------------- 104 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT-TC--CTTCBCTTSCBH-HHHHHHHTCHHHHHHHHHTTCCTT-------------
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc-CC--CCCCcCCCCCCH-HHHHHHCCCHHHHHHHHHcCCCCC-------------
Confidence 3468899999999999999999997 44 578899999999 999999999999999999999998
Q ss_pred hhhhhccc-ccCccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCccccccCcC
Q 036326 102 RQTIRMTN-QVKHTALHQAVFHITVDVVKILTREDPDYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVDNWG 180 (225)
Q Consensus 102 ~~~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~ 180 (225)
.++ ..|.||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+..+. ...+
T Consensus 105 -----~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~d~~g~t~l~~A~~~~~------------------~~~~ 160 (244)
T 3ui2_A 105 -----HRDMRGGLTALHMAAGYVRPEVVEALVELGADIE-VEDERGLTALELAREILK------------------TTPK 160 (244)
T ss_dssp -----CCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHHHHT------------------TCCC
T ss_pred -----cCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-CCCCCCCcHHHHHHHHHh------------------ccCC
Confidence 666 789999999999999999999999999988 789999999999986221 2457
Q ss_pred CcHHHHHHHcCCHHHHHHHHHhchh
Q 036326 181 WNFLHYAVFSFEVEELRNLVDNMLA 205 (225)
Q Consensus 181 ~t~l~~a~~~~~~~~~~~Ll~~g~~ 205 (225)
.||||+|+..|+.+++++|++++.+
T Consensus 161 ~~~l~~a~~~g~~~iv~~L~~~~~~ 185 (244)
T 3ui2_A 161 GNPMQFGRRIGLEKVINVLEGQVFE 185 (244)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred CCHHHHHHHcChHHHHHHHHHhccc
Confidence 9999999999999999999998644
No 94
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.93 E-value=1.9e-26 Score=172.59 Aligned_cols=135 Identities=19% Similarity=0.099 Sum_probs=115.3
Q ss_pred cCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhcccccchhhhhcccccCccHHHHHHHcCCHHHHHHHHhc-
Q 036326 56 VNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGASRQTIRMTNQVKHTALHQAVFHITVDVVKILTRE- 134 (225)
Q Consensus 56 ~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~- 134 (225)
.+..|.|| ||+|+..|+.+++++|++.|++++ .++..|.||||+|+..|+.+++++|++.
T Consensus 69 ~~~~g~t~-L~~A~~~g~~~~v~~Ll~~g~~~~------------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~ 129 (222)
T 3ehr_A 69 QAESIDNP-LHEAAKRGNLSWLRECLDNRVGVN------------------GLDKAGSTALYWACHGGHKDIVEMLFTQP 129 (222)
T ss_dssp HEEEESCH-HHHHHHHTCHHHHHHHHHTTCCTT------------------CCCTTSCCHHHHHHHTTCHHHHHHHTTST
T ss_pred cccccccc-cccccccCcHHHHHHHHhCCCCcc------------------ccCCCCCCHHHHHHHcCCHHHHHHHHcCC
Confidence 45678999 999999999999999999999988 7889999999999999999999999999
Q ss_pred CCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCccccccCcCCcHHHHHHHcCCHHHHHHHHHhchhhhcccc
Q 036326 135 DPDYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVDNWGWNFLHYAVFSFEVEELRNLVDNMLASSLMNE 211 (225)
Q Consensus 135 ~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~ 211 (225)
|++++ ..+..|.||||+|+..|+.+++++|+++|++ ++.++..|.||||+|+..++.++++.|++.|+.....+.
T Consensus 130 g~~~~-~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~ 204 (222)
T 3ehr_A 130 NIELN-QQNKLGDTALHAAAWKGYADIVQLLLAKGAR-TDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNA 204 (222)
T ss_dssp TCCCC-CCCTTSCCHHHHHHHHTCHHHHHHHHHHTCC-SCCCCTTSCCHHHHCCSHHHHHHHC--------------
T ss_pred CCCcc-ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccch
Confidence 88887 7899999999999999999999999999988 999999999999999999999999999999999444444
No 95
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.93 E-value=2.6e-25 Score=151.28 Aligned_cols=112 Identities=15% Similarity=0.119 Sum_probs=104.3
Q ss_pred cccCccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCccccccCcCCcHHHHHH
Q 036326 109 NQVKHTALHQAVFHITVDVVKILTREDPDYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVDNWGWNFLHYAV 188 (225)
Q Consensus 109 ~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~ 188 (225)
+..|.||||+|+..|+.+++++|++.|.+++ ..+..|.||||+|+..|+.+++++|++++++ ++.++..|+||||+|+
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~tpL~~A~ 81 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVN-RTLEGGRKPLHYAADCGQLEILEFLLLKGAD-INAPDKHHITPLLSAV 81 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTT-SCCTTSSCHHHHHHHTTCHHHHHHHHTTTCC-TTCCCTTSCCHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcC-ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCHHHHHH
Confidence 4567899999999999999999999999987 7888999999999999999999999999988 9999999999999999
Q ss_pred HcCCHHHHHHHHHhchhhhccccCCCCCCCcchhccC
Q 036326 189 FSFEVEELRNLVDNMLASSLMNEGDAKGKSNVHFFAA 225 (225)
Q Consensus 189 ~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~a~~ 225 (225)
..|+.+++++|+++|++ ++.+|..|+||+|+|+.
T Consensus 82 ~~~~~~~v~~Ll~~ga~---~~~~~~~g~t~l~~A~~ 115 (123)
T 3aaa_C 82 YEGHVSCVKLLLSKGAD---KTVKGPDGLTAFEATDN 115 (123)
T ss_dssp HHTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHCCC
T ss_pred HcCCHHHHHHHHHcCCC---CCCcCCCCCCHHHHhCC
Confidence 99999999999999999 88899999999999863
No 96
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.93 E-value=1.6e-25 Score=162.71 Aligned_cols=140 Identities=17% Similarity=0.130 Sum_probs=125.7
Q ss_pred cCCCChHHHHHHHcCCcHHHHHHHHhhCCccccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhcccccc
Q 036326 22 QSQIDPNLFKATAAGNSEPFKDMAREICPSLLLQVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGAS 101 (225)
Q Consensus 22 ~~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~ 101 (225)
+..|.||||.|+..|+.++++.|+. +. +++.+|..|.|| ||+|+..|+.+++++|+++|++++
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~--~~~~~d~~g~t~-L~~A~~~~~~~~v~~Ll~~ga~~~------------- 103 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DR--DVDAVDENGRTA-LLFVAGLGSDKCVRLLAEAGADLD------------- 103 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TS--CTTCCCTTSCCH-HHHHHHHTCHHHHHHHHHTTCCTT-------------
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cC--CCCCcCCCCCCH-HHHHHHcCCHHHHHHHHHcCCCCC-------------
Confidence 3468899999999999999999997 44 578899999999 999999999999999999999998
Q ss_pred hhhhhccc-ccCccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCccccccCcC
Q 036326 102 RQTIRMTN-QVKHTALHQAVFHITVDVVKILTREDPDYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVDNWG 180 (225)
Q Consensus 102 ~~~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~ 180 (225)
.++ ..|.||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+..++. ..+
T Consensus 104 -----~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~-~~d~~g~tpl~~A~~~~~~------------------~~~ 159 (183)
T 3deo_A 104 -----HRDMRGGLTALHMAAGYVRPEVVEALVELGADIE-VEDERGLTALELAREILKT------------------TPK 159 (183)
T ss_dssp -----CCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCCTT-CCCTTSCCHHHHHHHHHHT------------------CCC
T ss_pred -----cCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCc-CCCCCCCCHHHHHHHhccC------------------ccc
Confidence 666 889999999999999999999999999988 7899999999999874321 346
Q ss_pred CcHHHHHHHcCCHHHHHHHHHh
Q 036326 181 WNFLHYAVFSFEVEELRNLVDN 202 (225)
Q Consensus 181 ~t~l~~a~~~~~~~~~~~Ll~~ 202 (225)
.++|++|+..|+.+++++|.++
T Consensus 160 ~~~l~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 160 GNPMQFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp CSHHHHHHHHHHHHHHHHHHTC
T ss_pred ccHHHHHHHcCHHHHHHHHHHh
Confidence 8999999999999999999875
No 97
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.92 E-value=4.9e-25 Score=172.18 Aligned_cols=140 Identities=16% Similarity=0.054 Sum_probs=121.0
Q ss_pred CChHHHHHHHcCCcHHHHHHHHhhCCccccc------cCCCCCCHHHHHHHhc---CcHHHHHHHHhcCccCccchhhhh
Q 036326 25 IDPNLFKATAAGNSEPFKDMAREICPSLLLQ------VNAKGDSRSLLNATKF---GHCDIASVLIERAKLVEHEDEELE 95 (225)
Q Consensus 25 ~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~------~~~~g~t~~lh~a~~~---g~~~~~~~Ll~~~~~~~~~~~~~~ 95 (225)
..++|+.|+..|+.+.++.|+..+.. ++. .+..|.|| ||+|+.. |+.+++++|++.|++++
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d--~~~~~~~~~~~~~g~t~-Lh~A~~~~~~~~~~iv~~Ll~~gadvn------- 220 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQD--FGQPLPGPDAQAPEELV-LHLAVKVANQASLPLVDFIIQNGGHLD------- 220 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCC--TTSCEECSSSCSCEECH-HHHHHHTCCTTTHHHHHHHHHHSSCTT-------
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCc--ccccCCCcccCCCCccH-HHHHHHhcccCcHHHHHHHHhcCCCCC-------
Confidence 34679999999999999999977663 444 58899999 9999997 89999999999999999
Q ss_pred cccccchhhhhcccccCccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCcccc
Q 036326 96 SGVGASRQTIRMTNQVKHTALHQAVFHITVDVVKILTREDPDYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYEL 175 (225)
Q Consensus 96 ~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~ 175 (225)
.++..|.||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+..|+.+++++|++++++
T Consensus 221 -----------~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~-~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~---- 284 (301)
T 2b0o_E 221 -----------AKAADGNTALHYAALYNQPDCLKLLLKGRALVG-TVNEAGETALDIARKKHHKECEELLEQAQAG---- 284 (301)
T ss_dssp -----------CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCS-CCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH----
T ss_pred -----------CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC----
Confidence 788999999999999999999999999999988 8899999999999999999999999998764
Q ss_pred ccCcCCcHHHHHHHcCCH
Q 036326 176 VDNWGWNFLHYAVFSFEV 193 (225)
Q Consensus 176 ~~~~~~t~l~~a~~~~~~ 193 (225)
.|.||||+|+..|+.
T Consensus 285 ---~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 285 ---TFAFPLHVDYSWVIS 299 (301)
T ss_dssp ---TTSSCCC--------
T ss_pred ---CCCChhHHHHhcCCc
Confidence 589999999988864
No 98
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.92 E-value=2.6e-24 Score=146.27 Aligned_cols=113 Identities=17% Similarity=0.147 Sum_probs=102.5
Q ss_pred cCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhcccccchhhhhcccccCccHHHHHHHcCCHHHHHHHHhcC
Q 036326 56 VNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGASRQTIRMTNQVKHTALHQAVFHITVDVVKILTRED 135 (225)
Q Consensus 56 ~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~ 135 (225)
.+..|.|| ||+|+..|+.+++++|++.|.+++ .++..|.||||+|+..|+.+++++|++.|
T Consensus 3 ~~~~~~~~-l~~A~~~~~~~~v~~ll~~~~~~~------------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 63 (123)
T 3aaa_C 3 LGSMCDKE-FMWALKNGDLDEVKDYVAKGEDVN------------------RTLEGGRKPLHYAADCGQLEILEFLLLKG 63 (123)
T ss_dssp ----CHHH-HHHHHHTTCHHHHHHHHHTTCCTT------------------SCCTTSSCHHHHHHHTTCHHHHHHHHTTT
T ss_pred cccccchH-HHHHHHcCCHHHHHHHHHcCCCcC------------------ccCCCCCcHHHHHHHcCCHHHHHHHHHcC
Confidence 34677899 999999999999999999999988 78889999999999999999999999999
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCccccccCcCCcHHHHHHH
Q 036326 136 PDYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVDNWGWNFLHYAVF 189 (225)
Q Consensus 136 ~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~ 189 (225)
++++ ..+..|.||||+|+..|+.+++++|+++|++ ++.++..|.||+|+|..
T Consensus 64 ~~~~-~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~ 115 (123)
T 3aaa_C 64 ADIN-APDKHHITPLLSAVYEGHVSCVKLLLSKGAD-KTVKGPDGLTAFEATDN 115 (123)
T ss_dssp CCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHCCC
T ss_pred CCCC-cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHhCC
Confidence 9987 7888999999999999999999999999988 99999999999999943
No 99
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.92 E-value=2.5e-24 Score=172.03 Aligned_cols=145 Identities=16% Similarity=0.138 Sum_probs=118.2
Q ss_pred CCCCCHHHHHHHhc-CcHHHHHHHHhcCccCccchhhhhcccccchhhhhccc--ccCccHHHHHHHcCCHHHHHHHHhc
Q 036326 58 AKGDSRSLLNATKF-GHCDIASVLIERAKLVEHEDEELESGVGASRQTIRMTN--QVKHTALHQAVFHITVDVVKILTRE 134 (225)
Q Consensus 58 ~~g~t~~lh~a~~~-g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~t~L~~A~~~g~~~~v~~Ll~~ 134 (225)
..+.|+ ||.|+.. |+.++++.|++.|++++ ..+ ..|.||||+|+..|+.+++++|++.
T Consensus 197 ~~~~t~-L~~Aa~~~g~~~~v~~LL~~Gadvn------------------~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~ 257 (368)
T 3jue_A 197 LHPGAL-LFRASGHPPSLPTMADALAHGADVN------------------WVNGGQDNATPLIQATAANSLLACEFLLQN 257 (368)
T ss_dssp CCHHHH-HHHHTSSSCCHHHHHHHHHTTCCTT------------------CCCTTTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CCCCcH-HHHHHHccCCHHHHHHHHHcCCCCC------------------ccccccCCCCHHHHHHHCCCHHHHHHHHHc
Confidence 445678 9999999 99999999999999998 556 7899999999999999999999999
Q ss_pred CCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCccccccCcCCcHHHHHHHcCCHHHHHHHHHhchhhhccccCCC
Q 036326 135 DPDYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVDNWGWNFLHYAVFSFEVEELRNLVDNMLASSLMNEGDA 214 (225)
Q Consensus 135 ~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~ 214 (225)
|++++ ..+..|.||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..++.+++++|+.+|.........+.
T Consensus 258 Gadvn-~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad-~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~ 335 (368)
T 3jue_A 258 GANVN-QADSAGRGPLHHATILGHTGLACLFLKRGAD-LGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQA 335 (368)
T ss_dssp TCCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC----------
T ss_pred CCCCC-CCCCCCCCHHHHHHHcCcHHHHHHHHHCcCC-CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCC
Confidence 99998 7889999999999999999999999999988 999999999999999999999999999999855333455566
Q ss_pred CCCCcchhc
Q 036326 215 KGKSNVHFF 223 (225)
Q Consensus 215 ~g~tpl~~a 223 (225)
.+.|+++++
T Consensus 336 ~~~t~l~i~ 344 (368)
T 3jue_A 336 GDETYLDIF 344 (368)
T ss_dssp ---------
T ss_pred CCCCHHHHH
Confidence 788888764
No 100
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.92 E-value=4e-24 Score=177.88 Aligned_cols=143 Identities=13% Similarity=-0.001 Sum_probs=117.5
Q ss_pred CCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhcccccchhhhhcccccCccHHHHHHH---cCCHHHHHHHHhcCC
Q 036326 60 GDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGASRQTIRMTNQVKHTALHQAVF---HITVDVVKILTREDP 136 (225)
Q Consensus 60 g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~---~g~~~~v~~Ll~~~~ 136 (225)
..+. ||.|+..|+.+.++.|++.|++++.... ....+..|.||||+|+. .|+.+++++|++.|+
T Consensus 132 ~~~~-L~~A~~~g~~~~v~~ll~~g~~~n~~~~------------~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga 198 (497)
T 3lvq_E 132 EPQR-LWTAICNRDLLSVLEAFANGQDFGQPLP------------GPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGG 198 (497)
T ss_dssp CHHH-HHHHHHHTCHHHHHHHHHTTCCSSSCBC------------CSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSC
T ss_pred cHHH-HHHHHhccCHHHHHHHHhhcccccCCCC------------CcccccccchHHHHHHHhcccccHHHHHHHHHcCC
Confidence 3467 9999999999999999999999881100 00127789999999976 899999999999999
Q ss_pred CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCccccccCcCCcHHHHHHHcCCHHHHHHHHHhchhhhccccCCCCC
Q 036326 137 DYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVDNWGWNFLHYAVFSFEVEELRNLVDNMLASSLMNEGDAKG 216 (225)
Q Consensus 137 ~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g 216 (225)
+++ ..+..|.||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|+++|++ ++......
T Consensus 199 ~vn-~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~---~~~~~~h~ 273 (497)
T 3lvq_E 199 HLD-AKAADGNTALHYAALYNQPDCLKLLLKGRAL-VGTVNEAGETALDIARKKHHKECEELLEQAQAG---TFAFPLHV 273 (497)
T ss_dssp CTT-CCCSSSCCHHHHHTTTTCHHHHHHHHHTCCC-CSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC------------
T ss_pred CCC-ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCC---CCCCccee
Confidence 998 7899999999999999999999999999998 999999999999999999999999999999999 55533344
Q ss_pred CCcc
Q 036326 217 KSNV 220 (225)
Q Consensus 217 ~tpl 220 (225)
.++|
T Consensus 274 ~~~~ 277 (497)
T 3lvq_E 274 DYSW 277 (497)
T ss_dssp ----
T ss_pred eccc
Confidence 3443
No 101
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.92 E-value=1.9e-26 Score=184.93 Aligned_cols=164 Identities=13% Similarity=0.008 Sum_probs=130.3
Q ss_pred CChHHHHHHH-cCCcHHHHHHHHhhCCccccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhcccccchh
Q 036326 25 IDPNLFKATA-AGNSEPFKDMAREICPSLLLQVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGASRQ 103 (225)
Q Consensus 25 ~~~~L~~A~~-~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~ 103 (225)
+.++++.|.. .++.+.++++++.+. .+.|| ||+|+..|+.+++++|++.|+.....
T Consensus 65 ~ll~~~~a~~~~~~~~~~~~l~~~g~---------~~~T~-Lh~Aa~~G~~e~v~~Ll~~ga~~~~~------------- 121 (376)
T 2aja_A 65 QLLCLYYAHYNRNAKQLWSDAHKKGI---------KSEVI-CFVAAITGCSSALDTLCLLLTSDEIV------------- 121 (376)
T ss_dssp HHHHHHHHHTTTTCTTHHHHHHHHTC---------CHHHH-HHHHHHHCCHHHHHHHTTC--CCSSC-------------
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHcCC---------CcCCH-HHHHHHcCCHHHHHHHHHcCCcHHHH-------------
Confidence 4456777766 578888888886654 23599 99999999999999999998732100
Q ss_pred hhhcccccCccHHHHHHHcCCHHHHHHHHhcCCCCC--CCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCcccc--ccCc
Q 036326 104 TIRMTNQVKHTALHQAVFHITVDVVKILTREDPDYP--YSANNYSKTPLCMAAEYKDARVVEAIISRNPECYEL--VDNW 179 (225)
Q Consensus 104 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~--~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~--~~~~ 179 (225)
...+..|.||||+|+..|+.+++++|++.|++.. ...... .||||+|+..|+.+++++|+++|++ ++. ++..
T Consensus 122 --~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~-~~~~~~d~~ 197 (376)
T 2aja_A 122 --KVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPT-EATAMIQAE 197 (376)
T ss_dssp --C--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGG-GHHHHHHHH
T ss_pred --HHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCc-cchhccCCC
Confidence 0234467789999999999999999999997521 012222 8999999999999999999999987 776 8889
Q ss_pred CCcHHHHHH-HcCCHHHHHHHHHhchhhhccccCCCCCCCcchhccC
Q 036326 180 GWNFLHYAV-FSFEVEELRNLVDNMLASSLMNEGDAKGKSNVHFFAA 225 (225)
Q Consensus 180 ~~t~l~~a~-~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~a~~ 225 (225)
|+||||+|+ ..|+.+++++|+++|++ |.||+|.|++
T Consensus 198 g~TpL~~Aa~~~G~~eiv~~Ll~~ga~----------~~taL~~Aa~ 234 (376)
T 2aja_A 198 NYYAFRWAAVGRGHHNVINFLLDCPVM----------LAYAEIHEFE 234 (376)
T ss_dssp HHHHHHHHHSTTCCHHHHHHHTTSHHH----------HHHHHHCTTT
T ss_pred CCCHHHHHHHHCCCHHHHHHHHhCCCc----------cchHHHHHHH
Confidence 999999999 99999999999998854 6789988874
No 102
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.91 E-value=1e-24 Score=163.09 Aligned_cols=134 Identities=22% Similarity=0.216 Sum_probs=112.1
Q ss_pred CCCChHHHHHHHcCCcHHHHHHHHhhCCccccccCCCCCCHHHHHHHhcCcHHHHHHHHhc-CccCccchhhhhcccccc
Q 036326 23 SQIDPNLFKATAAGNSEPFKDMAREICPSLLLQVNAKGDSRSLLNATKFGHCDIASVLIER-AKLVEHEDEELESGVGAS 101 (225)
Q Consensus 23 ~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~-~~~~~~~~~~~~~~~~~~ 101 (225)
..|.||||.|+..|+.++++.|+..+. .++.+|..|.|| ||+|+..|+.+++++|++. |++++
T Consensus 71 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~--~~~~~~~~g~t~-L~~A~~~~~~~~v~~Ll~~~g~~~~------------- 134 (222)
T 3ehr_A 71 ESIDNPLHEAAKRGNLSWLRECLDNRV--GVNGLDKAGSTA-LYWACHGGHKDIVEMLFTQPNIELN------------- 134 (222)
T ss_dssp EEESCHHHHHHHHTCHHHHHHHHHTTC--CTTCCCTTSCCH-HHHHHHTTCHHHHHHHTTSTTCCCC-------------
T ss_pred cccccccccccccCcHHHHHHHHhCCC--CccccCCCCCCH-HHHHHHcCCHHHHHHHHcCCCCCcc-------------
Confidence 356899999999999999999998776 477899999999 9999999999999999998 99998
Q ss_pred hhhhhcccccCccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCccccccCc
Q 036326 102 RQTIRMTNQVKHTALHQAVFHITVDVVKILTREDPDYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVDNW 179 (225)
Q Consensus 102 ~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~ 179 (225)
.++..|.||||+|+..|+.+++++|++.|++++ ..+..|.|||++|+..++.++++.|+..++. ...++..
T Consensus 135 -----~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~-~~~~~~~ 205 (222)
T 3ehr_A 135 -----QQNKLGDTALHAAAWKGYADIVQLLLAKGARTD-LRNIEKKLAFDMATNAACASLLKKKQGTDAV-RTLSNAE 205 (222)
T ss_dssp -----CCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSC-CCCTTSCCHHHHCCSHHHHHHHC----------------
T ss_pred -----ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc-cccCCCCCHHHHhcchhHHHHHHHHhccchh-hhccchh
Confidence 889999999999999999999999999999988 7899999999999999999999999998876 5555544
No 103
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.91 E-value=3e-24 Score=155.95 Aligned_cols=112 Identities=17% Similarity=0.170 Sum_probs=104.7
Q ss_pred ccccCccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCcccccc-CcCCcHHHH
Q 036326 108 TNQVKHTALHQAVFHITVDVVKILTREDPDYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVD-NWGWNFLHY 186 (225)
Q Consensus 108 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~-~~~~t~l~~ 186 (225)
.+..|.||||+|+..|+.++++.|++ +.+++ ..+..|.||||+|+..|+.+++++|+++|++ ++.++ ..|+||||+
T Consensus 40 ~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~-~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~~g~tpL~~ 116 (183)
T 3deo_A 40 VVSEYETPWWTAARKADEQALSQLLE-DRDVD-AVDENGRTALLFVAGLGSDKCVRLLAEAGAD-LDHRDMRGGLTALHM 116 (183)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHTT-TSCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCSSSSCCHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHh-cCCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCCHHHH
Confidence 35678899999999999999999999 88887 7888999999999999999999999999988 88888 889999999
Q ss_pred HHHcCCHHHHHHHHHhchhhhccccCCCCCCCcchhccC
Q 036326 187 AVFSFEVEELRNLVDNMLASSLMNEGDAKGKSNVHFFAA 225 (225)
Q Consensus 187 a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~~a~~ 225 (225)
|+..|+.+++++|+++|++ ++.+|..|+||||+|++
T Consensus 117 A~~~~~~~~v~~Ll~~ga~---~~~~d~~g~tpl~~A~~ 152 (183)
T 3deo_A 117 AAGYVRPEVVEALVELGAD---IEVEDERGLTALELARE 152 (183)
T ss_dssp HHHTTCHHHHHHHHHHTCC---TTCCCTTSCCHHHHHHH
T ss_pred HHhcCcHHHHHHHHHcCCC---CcCCCCCCCCHHHHHHH
Confidence 9999999999999999999 88999999999999863
No 104
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.91 E-value=2.4e-23 Score=160.90 Aligned_cols=129 Identities=15% Similarity=0.080 Sum_probs=117.4
Q ss_pred CHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhcccccchhhhhcccccCccHHHHHHHc---CCHHHHHHHHhcCCCC
Q 036326 62 SRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGASRQTIRMTNQVKHTALHQAVFH---ITVDVVKILTREDPDY 138 (225)
Q Consensus 62 t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~---g~~~~v~~Ll~~~~~~ 138 (225)
++ |+.|+..|+.+.++.+++.|.+++.. .+++..+..|.||||+|+.. |+.+++++|++.|+++
T Consensus 132 ~~-l~~a~~~~d~~~~~~ll~~g~~~~~~------------~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~i 198 (278)
T 1dcq_A 132 HS-LCEAVKTRDIFGLLQAYADGVDLTEK------------IPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNL 198 (278)
T ss_dssp HH-HHHHHHTTCHHHHHHHHHTTCCTTSB------------CCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCT
T ss_pred hh-hhhHhhhcccHHHHHHHHhhcchhhh------------ccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCc
Confidence 56 99999999999999999999886511 01235578899999999999 8999999999999998
Q ss_pred CCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCccccccCcCCcHHHHHHHcCCHHHHHHHHHhchh
Q 036326 139 PYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVDNWGWNFLHYAVFSFEVEELRNLVDNMLA 205 (225)
Q Consensus 139 ~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~ 205 (225)
+ ..+..|.||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|+++|++
T Consensus 199 n-~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~ 263 (278)
T 1dcq_A 199 D-KQTGKGSTALHYCCLTDNAECLKLLLRGKAS-IEIANESGETPLDIAKRLKHEHCEELLTQALSG 263 (278)
T ss_dssp T-CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred c-ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 8 7889999999999999999999999999998 999999999999999999999999999999987
No 105
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.90 E-value=1.7e-25 Score=169.90 Aligned_cols=113 Identities=24% Similarity=0.207 Sum_probs=99.0
Q ss_pred cCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhcccccchhhhhcccccCccHHHHHHHcCCHHHHHHHHhcC
Q 036326 56 VNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGASRQTIRMTNQVKHTALHQAVFHITVDVVKILTRED 135 (225)
Q Consensus 56 ~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~ 135 (225)
.+..|.|| ||+|+..|+.++++.|++ |.+++ .++..|.||||+|+..|+.+++++|++.|
T Consensus 41 ~~~~g~t~-L~~A~~~g~~~~v~~Ll~-~~~~~------------------~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g 100 (244)
T 3ui2_A 41 VVSEYETP-WWTAARKADEQALSQLLE-DRDVD------------------AVDENGRTALLFVAGLGSDKCVRLLAEAG 100 (244)
T ss_dssp HHHHHHHH-HHHHHTTTCHHHHHHTTT-TCCTT------------------CBCTTSCBHHHHHHHHTCHHHHHHHHHTT
T ss_pred cccCCCCH-HHHHHHcCCHHHHHHHHc-CCCCC------------------CcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 45688899 999999999999999998 88888 77888999999999999999999999999
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCccccccCcCCcHHHHHHH
Q 036326 136 PDYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVDNWGWNFLHYAVF 189 (225)
Q Consensus 136 ~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~ 189 (225)
++++...+..|.||||+|+..|+.+++++|+++|++ ++.++..|+||||+|+.
T Consensus 101 a~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~d~~g~t~l~~A~~ 153 (244)
T 3ui2_A 101 ADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGAD-IEVEDERGLTALELARE 153 (244)
T ss_dssp CCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHH
T ss_pred CCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCcHHHHHHH
Confidence 988733337899999999999999999999999887 88899999999999875
No 106
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.90 E-value=5.8e-23 Score=132.73 Aligned_cols=93 Identities=25% Similarity=0.283 Sum_probs=88.0
Q ss_pred cCccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCccccccCcCCcHHHHHHHc
Q 036326 111 VKHTALHQAVFHITVDVVKILTREDPDYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVDNWGWNFLHYAVFS 190 (225)
Q Consensus 111 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~ 190 (225)
+|.||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+..|+.+++++|+++|++ ++.++..|+||||+|+..
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n-~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~t~l~~A~~~ 78 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVN-AKDKNGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARN 78 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCc-ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHc
Confidence 37899999999999999999999999988 7889999999999999999999999999998 999999999999999999
Q ss_pred CCHHHHHHHHHhchh
Q 036326 191 FEVEELRNLVDNMLA 205 (225)
Q Consensus 191 ~~~~~~~~Ll~~g~~ 205 (225)
|+.+++++|+++|++
T Consensus 79 ~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 79 GHLEVVKLLLEAGAY 93 (93)
T ss_dssp TCHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHcCCC
Confidence 999999999999975
No 107
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.89 E-value=1.5e-22 Score=168.46 Aligned_cols=134 Identities=17% Similarity=0.088 Sum_probs=114.6
Q ss_pred ChHHHHHHHcCCcHHHHHHHHhhCCcccccc------CCCCCCHHHHHHHh---cCcHHHHHHHHhcCccCccchhhhhc
Q 036326 26 DPNLFKATAAGNSEPFKDMAREICPSLLLQV------NAKGDSRSLLNATK---FGHCDIASVLIERAKLVEHEDEELES 96 (225)
Q Consensus 26 ~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~------~~~g~t~~lh~a~~---~g~~~~~~~Ll~~~~~~~~~~~~~~~ 96 (225)
.+.||.|+..|+.+.++.|+..+.. ++.. +..|.|| ||+||. .|+.+++++|+++|++++
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~g~~--~n~~~~~~~~~~~g~t~-Lh~A~~~a~~g~~~~v~~Ll~~ga~vn-------- 201 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFANGQD--FGQPLPGPDAQAPEELV-LHLAVKVANQASLPLVDFIIQNGGHLD-------- 201 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCC--SSSCBCCSSSCCSCBCH-HHHHHHTCCTTTHHHHHHHHHHSCCTT--------
T ss_pred HHHHHHHHhccCHHHHHHHHhhccc--ccCCCCCcccccccchH-HHHHHHhcccccHHHHHHHHHcCCCCC--------
Confidence 3679999999999999999988864 4444 7899999 999966 899999999999999999
Q ss_pred ccccchhhhhcccccCccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCccccc
Q 036326 97 GVGASRQTIRMTNQVKHTALHQAVFHITVDVVKILTREDPDYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELV 176 (225)
Q Consensus 97 ~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~ 176 (225)
.++..|.||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+..|+.+++++|+++|++ ++.
T Consensus 202 ----------~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~-~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~-~~~- 268 (497)
T 3lvq_E 202 ----------AKAADGNTALHYAALYNQPDCLKLLLKGRALVG-TVNEAGETALDIARKKHHKECEELLEQAQAG-TFA- 268 (497)
T ss_dssp ----------CCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCCS-CCCTTCCCHHHHHHHTTCHHHHHHHHHTCC------
T ss_pred ----------ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHhCCC-CCC-
Confidence 889999999999999999999999999999988 7899999999999999999999999999987 554
Q ss_pred cCcCCcHHHHHH
Q 036326 177 DNWGWNFLHYAV 188 (225)
Q Consensus 177 ~~~~~t~l~~a~ 188 (225)
+|+|.+.
T Consensus 269 -----~~~h~~~ 275 (497)
T 3lvq_E 269 -----FPLHVDY 275 (497)
T ss_dssp ------------
T ss_pred -----Ccceeec
Confidence 4666544
No 108
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.89 E-value=2.7e-22 Score=154.99 Aligned_cols=126 Identities=17% Similarity=0.148 Sum_probs=115.8
Q ss_pred ChHHHHHHHcCCcHHHHHHHHhhCCcc----ccccCCCCCCHHHHHHHhc---CcHHHHHHHHhcCccCccchhhhhccc
Q 036326 26 DPNLFKATAAGNSEPFKDMAREICPSL----LLQVNAKGDSRSLLNATKF---GHCDIASVLIERAKLVEHEDEELESGV 98 (225)
Q Consensus 26 ~~~L~~A~~~g~~~~v~~Ll~~~~~~~----~~~~~~~g~t~~lh~a~~~---g~~~~~~~Ll~~~~~~~~~~~~~~~~~ 98 (225)
.++|+.|+..|+.+.++.++..+.... ++..+..|.|| ||+|+.. |+.+++++|+++|++++
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~-Lh~A~~~~~~~~~~~v~~Ll~~ga~in---------- 199 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETA-LHLAVRSVDRTSLHIVDFLVQNSGNLD---------- 199 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBH-HHHHHHHCCTTTHHHHHHHHHHCSCTT----------
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCc-chHHHHhcccchHHHHHHHHHCCCCcc----------
Confidence 368999999999999999998776432 44558899999 9999999 89999999999999999
Q ss_pred ccchhhhhcccccCccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCC
Q 036326 99 GASRQTIRMTNQVKHTALHQAVFHITVDVVKILTREDPDYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPE 171 (225)
Q Consensus 99 ~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~ 171 (225)
.++..|.||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+..|+.+++++|+++++.
T Consensus 200 --------~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~-~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~ 263 (278)
T 1dcq_A 200 --------KQTGKGSTALHYCCLTDNAECLKLLLRGKASIE-IANESGETPLDIAKRLKHEHCEELLTQALSG 263 (278)
T ss_dssp --------CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred --------ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CccCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 889999999999999999999999999999988 8899999999999999999999999999875
No 109
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.89 E-value=3.3e-23 Score=139.10 Aligned_cols=110 Identities=20% Similarity=0.162 Sum_probs=101.0
Q ss_pred cccccCccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCccccccCcCCcHHHH
Q 036326 107 MTNQVKHTALHQAVFHITVDVVKILTREDPDYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVDNWGWNFLHY 186 (225)
Q Consensus 107 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~ 186 (225)
.++..|.||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+..++.+++++|+++|++ ++.++..|+||||+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~d~~g~tpl~~ 81 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVN-ARSKDGNTPLHLAAKNGHAEIVKLLLAKGAD-VNARSKDGNTPEHL 81 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSS-CCCSSSCCTTHHHHTTTCHHHHHHHTTTTCC-TTCCCTTCCCTTHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC-CcccCCCCCCHHHH
Confidence 568899999999999999999999999999987 7888999999999999999999999999988 99999999999999
Q ss_pred HHHcCCHHHHHHHHHhchhhhccccCCCCCCCcch
Q 036326 187 AVFSFEVEELRNLVDNMLASSLMNEGDAKGKSNVH 221 (225)
Q Consensus 187 a~~~~~~~~~~~Ll~~g~~~~~~~~~d~~g~tpl~ 221 (225)
|+..++.+++++|+++|++ ++.++..|.+|-.
T Consensus 82 A~~~~~~~~~~~Ll~~ga~---~n~~~~~~~~~~~ 113 (115)
T 2l6b_A 82 AKKNGHHEIVKLLDAKGAD---VNARSWGSSHHHH 113 (115)
T ss_dssp HHTTTCHHHHHHHHTTSSS---HHHHSCCCC----
T ss_pred HHHCCCHHHHHHHHHcCCC---CCcCCcccccccc
Confidence 9999999999999999999 8888889988853
No 110
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.89 E-value=1.4e-22 Score=161.96 Aligned_cols=160 Identities=14% Similarity=0.112 Sum_probs=115.7
Q ss_pred CCChHHHHHHHc-CCcHHHHHHHHhhCCccccccC--CCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhccccc
Q 036326 24 QIDPNLFKATAA-GNSEPFKDMAREICPSLLLQVN--AKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGA 100 (225)
Q Consensus 24 ~~~~~L~~A~~~-g~~~~v~~Ll~~~~~~~~~~~~--~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~ 100 (225)
.+.++||.|+.. |++++++.|+..+.. ++..+ ..|.|| ||+|+..|+.+++++|+++|++++
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL~~Gad--vn~~~~~~~g~Tp-Lh~Aa~~g~~~iv~~LL~~Gadvn------------ 262 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADALAHGAD--VNWVNGGQDNATP-LIQATAANSLLACEFLLQNGANVN------------ 262 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHHHTTCC--TTCCCTTTTCCCH-HHHHHHTTCHHHHHHHHHTTCCTT------------
T ss_pred CCCcHHHHHHHccCCHHHHHHHHHcCCC--CCccccccCCCCH-HHHHHHCCCHHHHHHHHHcCCCCC------------
Confidence 345799999999 999999999988774 55666 899999 999999999999999999999999
Q ss_pred chhhhhcccccCccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCc--cccccC
Q 036326 101 SRQTIRMTNQVKHTALHQAVFHITVDVVKILTREDPDYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPEC--YELVDN 178 (225)
Q Consensus 101 ~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~--~~~~~~ 178 (225)
.++..|.||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+..|+.+++++|+..+... ....+.
T Consensus 263 ------~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~-~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~ 335 (368)
T 3jue_A 263 ------QADSAGRGPLHHATILGHTGLACLFLKRGADLG-ARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQA 335 (368)
T ss_dssp ------CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHHHC----------
T ss_pred ------CCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCCC-CcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCC
Confidence 889999999999999999999999999999987 88999999999999999999999999875332 234455
Q ss_pred cCCcHHHHHHHcC--CHHHHHHHHHhchh
Q 036326 179 WGWNFLHYAVFSF--EVEELRNLVDNMLA 205 (225)
Q Consensus 179 ~~~t~l~~a~~~~--~~~~~~~Ll~~g~~ 205 (225)
.+.|+++++.... ..+-.+.|..++.+
T Consensus 336 ~~~t~l~i~~~~~~~~~~~~ekl~r~~~~ 364 (368)
T 3jue_A 336 GDETYLDIFRDFSLMASDDPEKLSRRSHD 364 (368)
T ss_dssp -----------------------------
T ss_pred CCCCHHHHHHHHHhhcCCCHHHHHhcCCC
Confidence 6778887766543 22333444444443
No 111
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.88 E-value=4.5e-22 Score=128.52 Aligned_cols=93 Identities=26% Similarity=0.369 Sum_probs=87.1
Q ss_pred CCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhcccccchhhhhcccccCccHHHHHHHcCCHHHHHHHHhcCCCC
Q 036326 59 KGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGASRQTIRMTNQVKHTALHQAVFHITVDVVKILTREDPDY 138 (225)
Q Consensus 59 ~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~ 138 (225)
+|.|| ||+|+..|+.+++++|++.|++++ .++..|.||||+|+..|+.+++++|++.|+++
T Consensus 1 ~g~t~-L~~A~~~~~~~~v~~Ll~~g~~~n------------------~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 61 (93)
T 1n0q_A 1 NGRTP-LHLAARNGHLEVVKLLLEAGADVN------------------AKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61 (93)
T ss_dssp --CCH-HHHHHHHTCHHHHHHHHHTTCCTT------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred CCCcH-HHHHHHcCCHHHHHHHHHcCCCCc------------------ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 47899 999999999999999999999998 78899999999999999999999999999998
Q ss_pred CCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCC
Q 036326 139 PYSANNYSKTPLCMAAEYKDARVVEAIISRNPE 171 (225)
Q Consensus 139 ~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~ 171 (225)
+ ..+..|.||||+|+..|+.+++++|+++|++
T Consensus 62 ~-~~d~~g~t~l~~A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 62 N-AKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp T-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred C-ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 8 7889999999999999999999999998863
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.87 E-value=3.1e-22 Score=134.30 Aligned_cols=109 Identities=19% Similarity=0.219 Sum_probs=96.8
Q ss_pred ccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhcccccchhhhhcccccCccHHHHHHHcCCHHHHHHHHhc
Q 036326 55 QVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGASRQTIRMTNQVKHTALHQAVFHITVDVVKILTRE 134 (225)
Q Consensus 55 ~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 134 (225)
.+|..|.|| ||+|+..|+.+++++|++.|++++ .++..|.||||+|+..|+.+++++|++.
T Consensus 4 ~~d~~g~t~-L~~A~~~~~~~~~~~Ll~~g~~~~------------------~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ 64 (115)
T 2l6b_A 4 WGSKDGNTP-LHNAAKNGHAEEVKKLLSKGADVN------------------ARSKDGNTPLHLAAKNGHAEIVKLLLAK 64 (115)
T ss_dssp CCSCSSCCH-HHHHHHHTCHHHHHHHTTTTCCSS------------------CCCSSSCCTTHHHHTTTCHHHHHHHTTT
T ss_pred ccCCCCCCH-HHHHHHcCCHHHHHHHHHcCCCCC------------------CcCCCCCCHHHHHHHcCcHHHHHHHHHc
Confidence 478899999 999999999999999999999888 7788899999999999999999999999
Q ss_pred CCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCccccccCcCCcHH
Q 036326 135 DPDYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVDNWGWNFL 184 (225)
Q Consensus 135 ~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~t~l 184 (225)
|++++ ..+..|.||||+|+..++.+++++|+++|++ ++.++..+.+|-
T Consensus 65 g~~~~-~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~-~n~~~~~~~~~~ 112 (115)
T 2l6b_A 65 GADVN-ARSKDGNTPEHLAKKNGHHEIVKLLDAKGAD-VNARSWGSSHHH 112 (115)
T ss_dssp TCCTT-CCCTTCCCTTHHHHTTTCHHHHHHHHTTSSS-HHHHSCCCC---
T ss_pred CCCCc-ccCCCCCCHHHHHHHCCCHHHHHHHHHcCCC-CCcCCccccccc
Confidence 99887 7788899999999999999999999999988 899998888874
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.80 E-value=5.6e-19 Score=117.46 Aligned_cols=94 Identities=18% Similarity=0.153 Sum_probs=84.5
Q ss_pred hhhcccccCccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhhCCCccccccCcCCcH
Q 036326 104 TIRMTNQVKHTALHQAVFHITVDVVKILTREDPDYPYSANNYSKTPLCMAAEYKDARVVEAIISRNPECYELVDNWGWNF 183 (225)
Q Consensus 104 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~t~ 183 (225)
.....+..|.||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+..|+.+++++|+++|++ ++.++..|+||
T Consensus 16 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~-~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~tp 93 (110)
T 2zgd_A 16 RGSHMGSDLGKKLLEAARAGQDDEVRILMANGADVA-AKDKNGSTPLHLAARNGHLEVVKLLLEAGAD-VXAQDKFGKTA 93 (110)
T ss_dssp ------CCHHHHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCH
T ss_pred cccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCC-ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccccCCCcH
Confidence 334567889999999999999999999999999988 7888999999999999999999999999987 99999999999
Q ss_pred HHHHHHcCCHHHHHHH
Q 036326 184 LHYAVFSFEVEELRNL 199 (225)
Q Consensus 184 l~~a~~~~~~~~~~~L 199 (225)
||+|+..|+.+++++|
T Consensus 94 l~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 94 FDISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHHHTCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHh
Confidence 9999999999999987
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.79 E-value=4.6e-19 Score=117.88 Aligned_cols=93 Identities=20% Similarity=0.301 Sum_probs=67.3
Q ss_pred ccccCCCCCCHHHHHHHhcCcHHHHHHHHhcCccCccchhhhhcccccchhhhhcccccCccHHHHHHHcCCHHHHHHHH
Q 036326 53 LLQVNAKGDSRSLLNATKFGHCDIASVLIERAKLVEHEDEELESGVGASRQTIRMTNQVKHTALHQAVFHITVDVVKILT 132 (225)
Q Consensus 53 ~~~~~~~g~t~~lh~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll 132 (225)
....+..|.|+ ||+|+..|+.+++++|++.|++++ .++..|.||||+|+..|+.+++++|+
T Consensus 17 ~~~~~~~g~t~-L~~A~~~g~~~~v~~Ll~~g~~i~------------------~~d~~g~tpLh~A~~~~~~~~v~~Ll 77 (110)
T 2zgd_A 17 GSHMGSDLGKK-LLEAARAGQDDEVRILMANGADVA------------------AKDKNGSTPLHLAARNGHLEVVKLLL 77 (110)
T ss_dssp -----CCHHHH-HHHHHHHTCHHHHHHHHHTTCCTT------------------CCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred ccccCCccchH-HHHHHHcCCHHHHHHHHHcCCCCC------------------ccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 34466777777 777777777777777777777776 66777777777777777777777777
Q ss_pred hcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHH
Q 036326 133 REDPDYPYSANNYSKTPLCMAAEYKDARVVEAI 165 (225)
Q Consensus 133 ~~~~~~~~~~~~~~~t~l~~a~~~g~~~~~~~L 165 (225)
+.|++++ ..+..|.||||+|+..|+.+++++|
T Consensus 78 ~~ga~~~-~~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 78 EAGADVX-AQDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp HTTCCTT-CCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HcCCCcc-ccccCCCcHHHHHHHcCCHHHHHHh
Confidence 7777766 6677777777777777777777765
No 115
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=57.77 E-value=7.5 Score=19.42 Aligned_cols=18 Identities=17% Similarity=0.455 Sum_probs=15.2
Q ss_pred HHHHHHHcCCcHHHHHHH
Q 036326 28 NLFKATAAGNSEPFKDMA 45 (225)
Q Consensus 28 ~L~~A~~~g~~~~v~~Ll 45 (225)
-+..||..||++.++.|=
T Consensus 16 qiyvA~seGd~etv~~Le 33 (40)
T 1gp8_A 16 QMDAAASKGDVETYRKLK 33 (40)
T ss_dssp HHHHHHTTSCHHHHHHHH
T ss_pred HHHHHHhcCCHHHHHHHH
Confidence 378899999999998884
No 116
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=55.79 E-value=49 Score=23.03 Aligned_cols=131 Identities=10% Similarity=-0.019 Sum_probs=84.7
Q ss_pred CChHHHHHHHcCCcHHHHHHHHhhCCccccccCCCCCCHHH-HHHHhcCcHHHHHHHHhcCccCccchhhhhcccccchh
Q 036326 25 IDPNLFKATAAGNSEPFKDMAREICPSLLLQVNAKGDSRSL-LNATKFGHCDIASVLIERAKLVEHEDEELESGVGASRQ 103 (225)
Q Consensus 25 ~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~~l-h~a~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~ 103 (225)
-++-|-.|.+.|+++....+...... ... +.- | ..|...|+.++++....+-.++.
T Consensus 8 ~~~rF~LAL~lg~l~~A~e~a~~l~~-----~~~--Wk~-Lg~~AL~~gn~~lAe~cy~~~~D~~--------------- 64 (177)
T 3mkq_B 8 PHIRFDLALEYGNLDAALDEAKKLND-----SIT--WER-LIQEALAQGNASLAEMIYQTQHSFD--------------- 64 (177)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHCC-----HHH--HHH-HHHHHHHTTCHHHHHHHHHHTTCHH---------------
T ss_pred hHHHHHHHHhcCCHHHHHHHHHHhCC-----HHH--HHH-HHHHHHHcCChHHHHHHHHHhCCHH---------------
Confidence 34668999999999998777644321 111 222 3 56677899999999988754443
Q ss_pred hhhcccccCccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCcHHHHHHHcCCH-HHHHHHHhhCCCccccccCcCCc
Q 036326 104 TIRMTNQVKHTALHQAVFHITVDVVKILTREDPDYPYSANNYSKTPLCMAAEYKDA-RVVEAIISRNPECYELVDNWGWN 182 (225)
Q Consensus 104 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~g~~-~~~~~Ll~~~~~~~~~~~~~~~t 182 (225)
..+.+....|+.+-++.+-+.- .....-....+.+...|+. ++++.|.+.+.. .-
T Consensus 65 ----------~L~~Ly~~tg~~e~L~kla~iA-----~~~g~~n~af~~~l~lGdv~~~i~lL~~~~r~---------~e 120 (177)
T 3mkq_B 65 ----------KLSFLYLVTGDVNKLSKMQNIA-----QTREDFGSMLLNTFYNNSTKERSSIFAEGGSL---------PL 120 (177)
T ss_dssp ----------HHHHHHHHHTCHHHHHHHHHHH-----HHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCH---------HH
T ss_pred ----------HHHHHHHHhCCHHHHHHHHHHH-----HHCccHHHHHHHHHHcCCHHHHHHHHHHCCCh---------HH
Confidence 3456666678877766665321 1122233457777788886 577777765432 12
Q ss_pred HHHHHHHcCCHHHHHHHHHh
Q 036326 183 FLHYAVFSFEVEELRNLVDN 202 (225)
Q Consensus 183 ~l~~a~~~~~~~~~~~Ll~~ 202 (225)
+...|.-+|..++++-+++.
T Consensus 121 A~~~A~t~g~~~~a~~~~~~ 140 (177)
T 3mkq_B 121 AYAVAKANGDEAAASAFLEQ 140 (177)
T ss_dssp HHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHcCcHHHHHHHHHH
Confidence 46677788999998888765
No 117
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=28.56 E-value=1.7e+02 Score=23.52 Aligned_cols=48 Identities=8% Similarity=0.179 Sum_probs=34.5
Q ss_pred HHcCCHHHHHHHHhcCCCCCCCCC-------------CCCCcHHHHHHHcCCHHHHHHHHh
Q 036326 120 VFHITVDVVKILTREDPDYPYSAN-------------NYSKTPLCMAAEYKDARVVEAIIS 167 (225)
Q Consensus 120 ~~~g~~~~v~~Ll~~~~~~~~~~~-------------~~~~t~l~~a~~~g~~~~~~~Ll~ 167 (225)
+-.|+...|+.-+..|.+.....+ ..|.|..|+|.+..+.+++..|+.
T Consensus 30 v~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 30 VVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp HHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhh
Confidence 445888888888888877653222 257788888888888888777775
No 118
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=26.06 E-value=70 Score=26.21 Aligned_cols=149 Identities=9% Similarity=-0.045 Sum_probs=0.0
Q ss_pred hHHHHHHHcCCcHHHHHHHHhhCCccccccCCCCCCHHHHHHHhcCc-------------HHHHHHHHhcCccCccchhh
Q 036326 27 PNLFKATAAGNSEPFKDMAREICPSLLLQVNAKGDSRSLLNATKFGH-------------CDIASVLIERAKLVEHEDEE 93 (225)
Q Consensus 27 ~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~~lh~a~~~g~-------------~~~~~~Ll~~~~~~~~~~~~ 93 (225)
..|..+++.|+++....++.......+.--...-++. |+..+..+. .++++.+...|..++
T Consensus 31 ~~id~c~k~G~~~~A~~lf~~M~~~Gv~pd~~tyn~L-i~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~G~~Pd----- 104 (501)
T 4g26_A 31 QKLDMCSKKGDVLEALRLYDEARRNGVQLSQYHYNVL-LYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKVVPN----- 104 (501)
T ss_dssp HHHHHTTTSCCHHHHHHHHHHHHHHTCCCCHHHHHHH-HHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHTTCCCC-----
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHcCCCCCHhHHHHH-HHHHHhCCchhhhhhcchHHHHHHHHHHHHHhCCCCC-----
Q ss_pred hhcccccchhhhhcccccCccHHHHHHHcCCHHHHHHHHhc----CCCCCCCCCCCCCcHHHHHHHcCCHH----HHHHH
Q 036326 94 LESGVGASRQTIRMTNQVKHTALHQAVFHITVDVVKILTRE----DPDYPYSANNYSKTPLCMAAEYKDAR----VVEAI 165 (225)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~----~~~~~~~~~~~~~t~l~~a~~~g~~~----~~~~L 165 (225)
...-.+.+...+..|+.+-+..+++. |..++ .....+.+...+..|+.+ +.+.+
T Consensus 105 ---------------~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd---~~tyn~lI~~~~~~g~~~~A~~l~~~M 166 (501)
T 4g26_A 105 ---------------EATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPR---LRSYGPALFGFCRKGDADKAYEVDAHM 166 (501)
T ss_dssp ---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCC---HHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred ---------------HHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCc---cceehHHHHHHHHCCCHHHHHHHHHHH
Q ss_pred HhhCCCccccccCcCCcHHHHHHHcCCHHHHHHHHHh
Q 036326 166 ISRNPECYELVDNWGWNFLHYAVFSFEVEELRNLVDN 202 (225)
Q Consensus 166 l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~ 202 (225)
.+.| +......-.+.+...+..|+.+-+.-+++.
T Consensus 167 ~~~G---~~Pd~~ty~~Li~~~~~~g~~d~A~~ll~~ 200 (501)
T 4g26_A 167 VESE---VVPEEPELAALLKVSMDTKNADKVYKTLQR 200 (501)
T ss_dssp HHTT---CCCCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HhcC---CCCCHHHHHHHHHHHhhCCCHHHHHHHHHH
No 119
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=24.00 E-value=1e+02 Score=24.73 Aligned_cols=59 Identities=17% Similarity=0.140 Sum_probs=37.8
Q ss_pred HhcCcHHHHHHHHhcCccCccchhhhhcccccch-hhhhcc--cccCccHHHHHHHcCCHHHHHHHHhc
Q 036326 69 TKFGHCDIASVLIERAKLVEHEDEELESGVGASR-QTIRMT--NQVKHTALHQAVFHITVDVVKILTRE 134 (225)
Q Consensus 69 ~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~ 134 (225)
+..|+...|+..+..|.+++-. .+... .+++-. -..|.|-+|+|++..+.+++..|+..
T Consensus 30 v~e~~~~~ve~y~~~gg~~~r~-------lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~~ 91 (454)
T 3zrh_A 30 VVEGDLAAIEAYKSSGGDIARQ-------LTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLTE 91 (454)
T ss_dssp HHHTCHHHHHHHHTTTCCTTCC-------CCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHHH
T ss_pred HHcCChhHHHHHHhcCCchhcc-------cCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhhc
Confidence 3457777777777777766511 00000 111111 13588999999999999999999863
Done!