BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036334
(654 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 118/295 (40%), Positives = 175/295 (59%), Gaps = 18/295 (6%)
Query: 336 GGVYSFDLEDLLRAS-----AEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAV--GKREF 388
G + F L +L AS +LG+G G YK L +GT V VKRLKE G+ +F
Sbjct: 23 GQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQF 82
Query: 389 EMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNR 448
+ ++E++ H N++ LR F + E+LLVY YM GS+++ L R + PLDW R
Sbjct: 83 QTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLR-ERPESQPPLDWPKR 141
Query: 449 MRIALSAARGLAHL--HVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRV 506
RIAL +ARGLA+L H KI+H ++KA+NILL + +A V DFGL L
Sbjct: 142 QRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXX 201
Query: 507 A-----GYRAPEVVETRKVTFKSDVYSFGVLLLELLTG-KAPNQASLG-EEGIDLPRWVQ 559
A G+ APE + T K + K+DV+ +GV+LLEL+TG +A + A L ++ + L WV+
Sbjct: 202 AVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 261
Query: 560 SVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIE 614
+++E+ + DV+L + +EE+ QL+Q+A+ C + P +RP M EVVRM+E
Sbjct: 262 GLLKEKKLEALVDVDLQGNYK-DEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 185 bits (469), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 117/295 (39%), Positives = 174/295 (58%), Gaps = 18/295 (6%)
Query: 336 GGVYSFDLEDLLRAS-----AEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAV--GKREF 388
G + F L +L AS +LG+G G YK L +G V VKRLKE G+ +F
Sbjct: 15 GQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQF 74
Query: 389 EMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNR 448
+ ++E++ H N++ LR F + E+LLVY YM GS+++ L R + PLDW R
Sbjct: 75 QTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLR-ERPESQPPLDWPKR 133
Query: 449 MRIALSAARGLAHL--HVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRV 506
RIAL +ARGLA+L H KI+H ++KA+NILL + +A V DFGL L
Sbjct: 134 QRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXX 193
Query: 507 A-----GYRAPEVVETRKVTFKSDVYSFGVLLLELLTG-KAPNQASLG-EEGIDLPRWVQ 559
A G+ APE + T K + K+DV+ +GV+LLEL+TG +A + A L ++ + L WV+
Sbjct: 194 AVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 253
Query: 560 SVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIE 614
+++E+ + DV+L + +EE+ QL+Q+A+ C + P +RP M EVVRM+E
Sbjct: 254 GLLKEKKLEALVDVDLQGNYK-DEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/274 (33%), Positives = 144/274 (52%), Gaps = 19/274 (6%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVA-----VGKREFEMQMEVLGKIKHDNVVPLRA 408
+G+G G YK + TTV VK+L + K++F+ +++V+ K +H+N+V L
Sbjct: 39 MGEGGFGVVYKGYVN-NTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 97
Query: 409 FYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKI 468
F D+ LVY YMP GSL L S G PL W R +IA AA G+ LH + I
Sbjct: 98 FSSDGDDLCLVYVYMPNGSLLDRL--SCLDGTPPLSWHMRCKIAQGAANGINFLHENHHI 155
Query: 469 VHGNIKASNILLRPDHDACVSDFGL---NPLFGNTTPPTRVAG---YRAPEVVETRKVTF 522
H +IK++NILL A +SDFGL + F T +R+ G Y APE + ++T
Sbjct: 156 -HRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRG-EITP 213
Query: 523 KSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIE 582
KSD+YSFGV+LLE++TG P E + L + E+ + D ++ +
Sbjct: 214 KSDIYSFGVVLLEIITG-LPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTS 272
Query: 583 EEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
E + +A C+ ++RP +++V ++++ M
Sbjct: 273 VE--AMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/274 (33%), Positives = 143/274 (52%), Gaps = 19/274 (6%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVA-----VGKREFEMQMEVLGKIKHDNVVPLRA 408
+G+G G YK + TTV VK+L + K++F+ +++V+ K +H+N+V L
Sbjct: 39 MGEGGFGVVYKGYVN-NTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 97
Query: 409 FYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKI 468
F D+ LVY YMP GSL L S G PL W R +IA AA G+ LH + I
Sbjct: 98 FSSDGDDLCLVYVYMPNGSLLDRL--SCLDGTPPLSWHMRCKIAQGAANGINFLHENHHI 155
Query: 469 VHGNIKASNILLRPDHDACVSDFGL---NPLFGNTTPPTRVAG---YRAPEVVETRKVTF 522
H +IK++NILL A +SDFGL + F T R+ G Y APE + ++T
Sbjct: 156 -HRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALRG-EITP 213
Query: 523 KSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIE 582
KSD+YSFGV+LLE++TG P E + L + E+ + D ++ +
Sbjct: 214 KSDIYSFGVVLLEIITG-LPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTS 272
Query: 583 EEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
E + +A C+ ++RP +++V ++++ M
Sbjct: 273 VE--AMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/274 (33%), Positives = 142/274 (51%), Gaps = 19/274 (6%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVA-----VGKREFEMQMEVLGKIKHDNVVPLRA 408
+G+G G YK + TTV VK+L + K++F+ +++V+ K +H+N+V L
Sbjct: 33 MGEGGFGVVYKGYVN-NTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 91
Query: 409 FYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKI 468
F D+ LVY YMP GSL L S G PL W R +IA AA G+ LH + I
Sbjct: 92 FSSDGDDLCLVYVYMPNGSLLDRL--SCLDGTPPLSWHMRCKIAQGAANGINFLHENHHI 149
Query: 469 VHGNIKASNILLRPDHDACVSDFGL---NPLFGNTTPPTRVAG---YRAPEVVETRKVTF 522
H +IK++NILL A +SDFGL + F R+ G Y APE + ++T
Sbjct: 150 -HRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALRG-EITP 207
Query: 523 KSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIE 582
KSD+YSFGV+LLE++TG P E + L + E+ + D ++ +
Sbjct: 208 KSDIYSFGVVLLEIITG-LPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTS 266
Query: 583 EEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
E + +A C+ ++RP +++V ++++ M
Sbjct: 267 VE--AMYSVASQCLHEKKNKRPDIKKVQQLLQEM 298
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 95/297 (31%), Positives = 148/297 (49%), Gaps = 17/297 (5%)
Query: 325 EADRNKLVFFEGGVYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKR-LKEVAV 383
E+ R LV E +FD + L+ G G G YK VL +G V +KR E +
Sbjct: 25 ESYRVPLVDLEEATNNFDHKFLI-------GHGVFGKVYKGVLRDGAKVALKRRTPESSQ 77
Query: 384 GKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPL 443
G EFE ++E L +H ++V L F ++E +L+Y YM G+L L+GS + +
Sbjct: 78 GIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMS-M 136
Query: 444 DWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPL---FGNT 500
W+ R+ I + AARGL +LH I+H ++K+ NILL + ++DFG++ G T
Sbjct: 137 SWEQRLEICIGAARGLHYLHTRA-IIHRDVKSINILLDENFVPKITDFGISKKGTELGQT 195
Query: 501 TPPTRVA---GYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRW 557
V GY PE ++T KSDVYSFGV+L E+L ++ SL E ++L W
Sbjct: 196 HLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEW 255
Query: 558 VQSVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIE 614
++ D L E + + A+ C++ + RP+M +V+ +E
Sbjct: 256 AVESHNNGQLEQIVDPNLADKIR-PESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 94/298 (31%), Positives = 148/298 (49%), Gaps = 19/298 (6%)
Query: 325 EADRNKLVFFEGGVYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKR-LKEVAV 383
E+ R LV E +FD + L+ G G G YK VL +G V +KR E +
Sbjct: 25 ESYRVPLVDLEEATNNFDHKFLI-------GHGVFGKVYKGVLRDGAKVALKRRTPESSQ 77
Query: 384 GKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPL 443
G EFE ++E L +H ++V L F ++E +L+Y YM G+L L+GS + +
Sbjct: 78 GIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMS-M 136
Query: 444 DWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPP 503
W+ R+ I + AARGL +LH I+H ++K+ NILL + ++DFG++ G
Sbjct: 137 SWEQRLEICIGAARGLHYLHTRA-IIHRDVKSINILLDENFVPKITDFGISKK-GTELDQ 194
Query: 504 TRVA-------GYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPR 556
T + GY PE ++T KSDVYSFGV+L E+L ++ SL E ++L
Sbjct: 195 THLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAE 254
Query: 557 WVQSVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIE 614
W ++ D L E + + A+ C++ + RP+M +V+ +E
Sbjct: 255 WAVESHNNGQLEQIVDPNLADKIR-PESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/196 (39%), Positives = 109/196 (55%), Gaps = 16/196 (8%)
Query: 355 GKGSVGTSYKAVLEEGTTVVVKRLKEVA-----VGKREFEMQMEVLGKIKHDNVVPLRAF 409
G+G G YK + TTV VK+L + K++F+ +++V K +H+N+V L F
Sbjct: 31 GEGGFGVVYKGYVN-NTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGF 89
Query: 410 YYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIV 469
D+ LVY Y P GSL L S G PL W R +IA AA G+ LH + I
Sbjct: 90 SSDGDDLCLVYVYXPNGSLLDRL--SCLDGTPPLSWHXRCKIAQGAANGINFLHENHHI- 146
Query: 470 HGNIKASNILLRPDHDACVSDFGL---NPLFGNTTPPTRVAG---YRAPEVVETRKVTFK 523
H +IK++NILL A +SDFGL + F +R+ G Y APE + ++T K
Sbjct: 147 HRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALRG-EITPK 205
Query: 524 SDVYSFGVLLLELLTG 539
SD+YSFGV+LLE++TG
Sbjct: 206 SDIYSFGVVLLEIITG 221
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 115/223 (51%), Gaps = 17/223 (7%)
Query: 332 VFFEGGVYSFDLE----DLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEV---AVG 384
++F+G + D++ DL E +G GS GT ++A G+ V VK L E A
Sbjct: 21 LYFQGAMDGDDMDIPWCDL--NIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAER 77
Query: 385 KREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLD 444
EF ++ ++ +++H N+V +V +Y+ GSL LLH S R LD
Sbjct: 78 VNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKS--GAREQLD 135
Query: 445 WDNRMRIALSAARGLAHLH-VSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPP 503
R+ +A A+G+ +LH + IVH N+K+ N+L+ + V DFGL+ L +T
Sbjct: 136 ERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLS 195
Query: 504 TRVAG----YRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAP 542
++ A + APEV+ KSDVYSFGV+L EL T + P
Sbjct: 196 SKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 114/223 (51%), Gaps = 17/223 (7%)
Query: 332 VFFEGGVYSFDLE----DLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEV---AVG 384
++F+G + D++ DL E +G GS GT ++A G+ V VK L E A
Sbjct: 21 LYFQGAMDGDDMDIPWCDL--NIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAER 77
Query: 385 KREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLD 444
EF ++ ++ +++H N+V +V +Y+ GSL LLH S R LD
Sbjct: 78 VNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKS--GAREQLD 135
Query: 445 WDNRMRIALSAARGLAHLH-VSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPP 503
R+ +A A+G+ +LH + IVH ++K+ N+L+ + V DFGL+ L +
Sbjct: 136 ERRRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLX 195
Query: 504 TRVAG----YRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAP 542
++ A + APEV+ KSDVYSFGV+L EL T + P
Sbjct: 196 SKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 124/269 (46%), Gaps = 28/269 (10%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSK 413
LG G G + A + T V VK +K ++ F + V+ ++HD +V L A +K
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV-TK 254
Query: 414 DEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNI 473
+ ++ ++M GSL L GS + PL + + A G+A + I H ++
Sbjct: 255 EPIYIITEFMAKGSLLDFLKSDEGS-KQPLP--KLIDFSAQIAEGMAFIEQRNYI-HRDL 310
Query: 474 KASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVTFKSDVYS 528
+A+NIL+ ++DFGL + + R + APE + T KSDV+S
Sbjct: 311 RAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWS 370
Query: 529 FGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMVQ 587
FG+LL+E++T G+ P G+ P ++++ R + R N EE
Sbjct: 371 FGILLMEIVTYGRIPYP------GMSNPEVIRALER--------GYRMPRPENCPEE--- 413
Query: 588 LLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
L I M C P++RP + + ++++
Sbjct: 414 LYNIMMRCWKNRPEERPTFEYIQSVLDDF 442
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 124/264 (46%), Gaps = 28/264 (10%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSK 413
LG G G + A + T V VK +K ++ F + V+ ++HD +V L A +K
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV-TK 248
Query: 414 DEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNI 473
+ ++ ++M GSL L GS + PL + + A G+A + I H ++
Sbjct: 249 EPIYIITEFMAKGSLLDFLKSDEGS-KQPLP--KLIDFSAQIAEGMAFIEQRNYI-HRDL 304
Query: 474 KASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLL 533
+A+NIL+ ++DFGL + G P + APE + T KSDV+SFG+LL
Sbjct: 305 RAANILVSASLVCKIADFGLARV-GAKFP----IKWTAPEAINFGSFTIKSDVWSFGILL 359
Query: 534 LELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMVQLLQIA 592
+E++T G+ P G+ P ++++ R + R N EE L I
Sbjct: 360 MEIVTYGRIPY------PGMSNPEVIRALER--------GYRMPRPENCPEE---LYNIM 402
Query: 593 MGCVSTVPDQRPAMQEVVRMIENM 616
M C P++RP + + ++++
Sbjct: 403 MRCWKNRPEERPTFEYIQSVLDDF 426
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 132/283 (46%), Gaps = 44/283 (15%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKRE---FEMQMEVLGKIKHDNVVPLRAFY 410
+G GS GT YK V VK L A ++ F+ ++ VL K +H N++ L Y
Sbjct: 32 IGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGY 88
Query: 411 YSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVH 470
+K + +V + SL LH S T + + IA ARG+ +LH I+H
Sbjct: 89 STKPQLAIVTQWCEGSSLYHHLHASE----TKFEMKKLIDIARQTARGMDYLHAKS-IIH 143
Query: 471 GNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG------------YRAPEVV--- 515
++K++NI L D+ + DFGL T +R +G + APEV+
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGL------ATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 197
Query: 516 ETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVEL 575
++ +F+SDVY+FG++L EL+TG+ P + I ++ V R + ++ V
Sbjct: 198 DSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI-----IEMVGRGSLSPDLSKVR- 251
Query: 576 MRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNR 618
N + M +L+ C+ D+RP+ ++ IE + R
Sbjct: 252 ---SNCPKRMKRLM---AECLKKKRDERPSFPRILAEIEELAR 288
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 134/277 (48%), Gaps = 32/277 (11%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKRE---FEMQMEVLGKIKHDNVVPLRAFY 410
+G GS GT YK V VK L A ++ F+ ++ VL K +H N++ L Y
Sbjct: 20 IGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGY 76
Query: 411 YSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVH 470
+K + +V + SL LH S T + + IA ARG+ +LH I+H
Sbjct: 77 STKPQLAIVTQWCEGSSLYHHLHASE----TKFEMKKLIDIARQTARGMDYLHAKS-IIH 131
Query: 471 GNIKASNILLRPDHDACVSDFGLNPL---FGNTTPPTRVAG---YRAPEVV---ETRKVT 521
++K++NI L D+ + DFGL + + + +++G + APEV+ ++ +
Sbjct: 132 RDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYS 191
Query: 522 FKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNI 581
F+SDVY+FG++L EL+TG+ P + I ++ V R + ++ V N
Sbjct: 192 FQSDVYAFGIVLYELMTGQLPYSNINNRDQI-----IEMVGRGSLSPDLSKVR----SNC 242
Query: 582 EEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNR 618
+ M +L+ C+ D+RP+ ++ IE + R
Sbjct: 243 PKRMKRLM---AECLKKKRDERPSFPRILAEIEELAR 276
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 124/270 (45%), Gaps = 28/270 (10%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSK 413
LG G G + A + T V VK +K ++ F + V+ ++HD +V L A +K
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV-TK 81
Query: 414 DEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNI 473
+ ++ ++M GSL L GS + PL + + A G+A + I H ++
Sbjct: 82 EPIYIITEFMAKGSLLDFLKSDEGS-KQPLP--KLIDFSAQIAEGMAFIEQRNYI-HRDL 137
Query: 474 KASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVTFKSDVYS 528
+A+NIL+ ++DFGL + + R + APE + T KSDV+S
Sbjct: 138 RAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWS 197
Query: 529 FGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMVQ 587
FG+LL+E++T G+ P G+ P ++++ R + R N EE
Sbjct: 198 FGILLMEIVTYGRIPYP------GMSNPEVIRALER--------GYRMPRPENCPEE--- 240
Query: 588 LLQIAMGCVSTVPDQRPAMQEVVRMIENMN 617
L I M C P++RP + + ++++
Sbjct: 241 LYNIMMRCWKNRPEERPTFEYIQSVLDDFE 270
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 124/272 (45%), Gaps = 28/272 (10%)
Query: 351 AEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFY 410
E LG G G + T V VK LK+ ++ F + ++ +++H +V L A
Sbjct: 14 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 73
Query: 411 YSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVH 470
+++ ++ +YM GSL L G L + + +A A G+A + I H
Sbjct: 74 -TQEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIEERNYI-H 128
Query: 471 GNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVTFKSD 525
N++A+NIL+ ++DFGL L + R + APE + T KSD
Sbjct: 129 RNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 188
Query: 526 VYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEE 584
V+SFG+LL E++T G+ P G+ P +Q++ R ++R N EE
Sbjct: 189 VWSFGILLTEIVTHGRIPYP------GMTNPEVIQNLER--------GYRMVRPDNCPEE 234
Query: 585 MVQLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
+ QL+++ C P+ RP + ++E+
Sbjct: 235 LYQLMRL---CWKERPEDRPTFDYLRSVLEDF 263
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 123/270 (45%), Gaps = 28/270 (10%)
Query: 354 LGKGSVGTSYKAVLEEGT-TVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYS 412
LG G G Y+ V ++ + TV VK LKE + EF + V+ +IKH N+V L
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 326
Query: 413 KDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGN 472
+ ++ ++M G+L L R R ++ + +A + + +L +H N
Sbjct: 327 EPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLE-KKNFIHRN 382
Query: 473 IKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVTFKSDVY 527
+ A N L+ +H V+DFGL+ L T + APE + K + KSDV+
Sbjct: 383 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 442
Query: 528 SFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMV 586
+FGVLL E+ T G +P GIDL + + + + D + R E++
Sbjct: 443 AFGVLLWEIATYGMSPYP------GIDLSQVYELLEK--------DYRMERPEGCPEKVY 488
Query: 587 QLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
+L++ C P RP+ E+ + E M
Sbjct: 489 ELMR---ACWQWNPSDRPSFAEIHQAFETM 515
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 123/270 (45%), Gaps = 28/270 (10%)
Query: 354 LGKGSVGTSYKAVLEEGT-TVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYS 412
LG G G Y+ V ++ + TV VK LKE + EF + V+ +IKH N+V L
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 284
Query: 413 KDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGN 472
+ ++ ++M G+L L R R ++ + +A + + +L +H N
Sbjct: 285 EPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLE-KKNFIHRN 340
Query: 473 IKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVTFKSDVY 527
+ A N L+ +H V+DFGL+ L T + APE + K + KSDV+
Sbjct: 341 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 400
Query: 528 SFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMV 586
+FGVLL E+ T G +P GIDL + + + + D + R E++
Sbjct: 401 AFGVLLWEIATYGMSPYP------GIDLSQVYELLEK--------DYRMERPEGCPEKVY 446
Query: 587 QLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
+L++ C P RP+ E+ + E M
Sbjct: 447 ELMR---ACWQWNPSDRPSFAEIHQAFETM 473
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 122/270 (45%), Gaps = 28/270 (10%)
Query: 354 LGKGSVGTSYKAVLEEGT-TVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYS 412
LG G G Y+ V ++ + TV VK LKE + EF + V+ +IKH N+V L
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 287
Query: 413 KDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGN 472
+ ++ ++M G+L L R R + + +A + + +L +H N
Sbjct: 288 EPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLE-KKNFIHRN 343
Query: 473 IKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVTFKSDVY 527
+ A N L+ +H V+DFGL+ L T + APE + K + KSDV+
Sbjct: 344 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 403
Query: 528 SFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMV 586
+FGVLL E+ T G +P GIDL + + + + D + R E++
Sbjct: 404 AFGVLLWEIATYGMSPYP------GIDLSQVYELLEK--------DYRMERPEGCPEKVY 449
Query: 587 QLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
+L++ C P RP+ E+ + E M
Sbjct: 450 ELMR---ACWQWNPSDRPSFAEIHQAFETM 476
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 100/207 (48%), Gaps = 13/207 (6%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSK 413
LG+G G + T V +K LK + F + +V+ KI+H+ +V L A S+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVV-SE 84
Query: 414 DEKLLVYDYMPAGSLSALLHGSRGSG-RTPLDWDNRMRIALSAARGLAHLHVSGKIVHGN 472
+ +V +YM GSL L G G R P + +A A G+A++ VH +
Sbjct: 85 EPIYIVTEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVE-RMNYVHRD 139
Query: 473 IKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVTFKSDVY 527
++A+NIL+ + V+DFGL L + R + APE + T KSDV+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 528 SFGVLLLELLT-GKAPNQASLGEEGID 553
SFG+LL EL T G+ P + E +D
Sbjct: 200 SFGILLTELTTKGRVPYPGMVNREVLD 226
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 124/272 (45%), Gaps = 28/272 (10%)
Query: 351 AEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFY 410
E LG G G + T V VK LK+ ++ F + ++ +++H +V L A
Sbjct: 26 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 85
Query: 411 YSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVH 470
+++ ++ +YM GSL L G L + + +A A G+A + I H
Sbjct: 86 -TQEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIEERNYI-H 140
Query: 471 GNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVTFKSD 525
+++A+NIL+ ++DFGL L + R + APE + T KSD
Sbjct: 141 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 200
Query: 526 VYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEE 584
V+SFG+LL E++T G+ P G+ P +Q++ R ++R N EE
Sbjct: 201 VWSFGILLTEIVTHGRIPY------PGMTNPEVIQNLER--------GYRMVRPDNCPEE 246
Query: 585 MVQLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
+ QL+++ C P+ RP + ++E+
Sbjct: 247 LYQLMRL---CWKERPEDRPTFDYLRSVLEDF 275
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 131/283 (46%), Gaps = 44/283 (15%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKRE---FEMQMEVLGKIKHDNVVPLRAFY 410
+G GS GT YK V VK L A ++ F+ ++ VL K +H N++ L Y
Sbjct: 32 IGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGY 88
Query: 411 YSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVH 470
+ + +V + SL LH S T + + IA ARG+ +LH I+H
Sbjct: 89 STAPQLAIVTQWCEGSSLYHHLHASE----TKFEMKKLIDIARQTARGMDYLHAKS-IIH 143
Query: 471 GNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG------------YRAPEVV--- 515
++K++NI L D+ + DFGL T +R +G + APEV+
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGL------ATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 197
Query: 516 ETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVEL 575
++ +F+SDVY+FG++L EL+TG+ P + I ++ V R + ++ V
Sbjct: 198 DSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI-----IEMVGRGSLSPDLSKVR- 251
Query: 576 MRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNR 618
N + M +L+ C+ D+RP+ ++ IE + R
Sbjct: 252 ---SNCPKRMKRLM---AECLKKKRDERPSFPRILAEIEELAR 288
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 124/272 (45%), Gaps = 28/272 (10%)
Query: 351 AEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFY 410
E LG G G + T V VK LK+ ++ F + ++ +++H +V L A
Sbjct: 20 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 79
Query: 411 YSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVH 470
+++ ++ +YM GSL L G L + + +A A G+A + +H
Sbjct: 80 -TQEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIE-ERNYIH 134
Query: 471 GNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVTFKSD 525
+++A+NIL+ ++DFGL L + R + APE + T KSD
Sbjct: 135 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 194
Query: 526 VYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEE 584
V+SFG+LL E++T G+ P G+ P +Q++ R ++R N EE
Sbjct: 195 VWSFGILLTEIVTHGRIPYP------GMTNPEVIQNLER--------GYRMVRPDNCPEE 240
Query: 585 MVQLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
+ QL+++ C P+ RP + ++E+
Sbjct: 241 LYQLMRL---CWKERPEDRPTFDYLRSVLEDF 269
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 124/272 (45%), Gaps = 28/272 (10%)
Query: 351 AEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFY 410
E LG G G + T V VK LK+ ++ F + ++ +++H +V L A
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 411 YSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVH 470
+++ ++ +YM GSL L G L + + +A A G+A + +H
Sbjct: 78 -TQEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIE-ERNYIH 132
Query: 471 GNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVTFKSD 525
+++A+NIL+ ++DFGL L + R + APE + T KSD
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 526 VYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEE 584
V+SFG+LL E++T G+ P G+ P +Q++ R ++R N EE
Sbjct: 193 VWSFGILLTEIVTHGRIPYP------GMTNPEVIQNLER--------GYRMVRPDNCPEE 238
Query: 585 MVQLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
+ QL+++ C P+ RP + ++E+
Sbjct: 239 LYQLMRL---CWKERPEDRPTFDYLRSVLEDF 267
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 124/272 (45%), Gaps = 28/272 (10%)
Query: 351 AEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFY 410
E LG G G + T V VK LK+ ++ F + ++ +++H +V L A
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 411 YSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVH 470
+++ ++ +YM GSL L G L + + +A A G+A + +H
Sbjct: 78 -TQEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIE-ERNYIH 132
Query: 471 GNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVTFKSD 525
+++A+NIL+ ++DFGL L + R + APE + T KSD
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 526 VYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEE 584
V+SFG+LL E++T G+ P G+ P +Q++ R ++R N EE
Sbjct: 193 VWSFGILLTEIVTHGRIPYP------GMTNPEVIQNLER--------GYRMVRPDNCPEE 238
Query: 585 MVQLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
+ QL+++ C P+ RP + ++E+
Sbjct: 239 LYQLMRL---CWKERPEDRPTFDYLRSVLEDF 267
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 124/272 (45%), Gaps = 28/272 (10%)
Query: 351 AEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFY 410
E LG G G + T V VK LK+ ++ F + ++ +++H +V L A
Sbjct: 24 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 411 YSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVH 470
+++ ++ +YM GSL L G L + + +A A G+A + +H
Sbjct: 84 -TQEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIE-ERNYIH 138
Query: 471 GNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVTFKSD 525
+++A+NIL+ ++DFGL L + R + APE + T KSD
Sbjct: 139 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 198
Query: 526 VYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEE 584
V+SFG+LL E++T G+ P G+ P +Q++ R ++R N EE
Sbjct: 199 VWSFGILLTEIVTHGRIPY------PGMTNPEVIQNLER--------GYRMVRPDNCPEE 244
Query: 585 MVQLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
+ QL+++ C P+ RP + ++E+
Sbjct: 245 LYQLMRL---CWKERPEDRPTFDYLRSVLEDF 273
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 124/271 (45%), Gaps = 28/271 (10%)
Query: 352 EVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYY 411
E LG G G + T V VK LK+ ++ F + ++ +++H +V L A
Sbjct: 19 ERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV- 77
Query: 412 SKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHG 471
+++ ++ +YM GSL L G L + + +A A G+A + +H
Sbjct: 78 TQEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIE-ERNYIHR 133
Query: 472 NIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVTFKSDV 526
+++A+NIL+ ++DFGL L + R + APE + T KSDV
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 193
Query: 527 YSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEM 585
+SFG+LL E++T G+ P G+ P +Q++ R ++R N EE+
Sbjct: 194 WSFGILLTEIVTHGRIPY------PGMTNPEVIQNLER--------GYRMVRPDNCPEEL 239
Query: 586 VQLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
QL+++ C P+ RP + ++E+
Sbjct: 240 YQLMRL---CWKERPEDRPTFDYLRSVLEDF 267
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 124/272 (45%), Gaps = 28/272 (10%)
Query: 351 AEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFY 410
E LG G G + T V VK LK+ ++ F + ++ +++H +V L A
Sbjct: 27 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 86
Query: 411 YSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVH 470
+++ ++ +YM GSL L G L + + +A A G+A + +H
Sbjct: 87 -TQEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIE-ERNYIH 141
Query: 471 GNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVTFKSD 525
+++A+NIL+ ++DFGL L + R + APE + T KSD
Sbjct: 142 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 201
Query: 526 VYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEE 584
V+SFG+LL E++T G+ P G+ P +Q++ R ++R N EE
Sbjct: 202 VWSFGILLTEIVTHGRIPY------PGMTNPEVIQNLER--------GYRMVRPDNCPEE 247
Query: 585 MVQLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
+ QL+++ C P+ RP + ++E+
Sbjct: 248 LYQLMRL---CWKERPEDRPTFDYLRSVLEDF 276
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 124/272 (45%), Gaps = 28/272 (10%)
Query: 351 AEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFY 410
E LG G G + T V VK LK+ ++ F + ++ +++H +V L A
Sbjct: 19 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 78
Query: 411 YSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVH 470
+++ ++ +YM GSL L G L + + +A A G+A + +H
Sbjct: 79 -TQEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIE-ERNYIH 133
Query: 471 GNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVTFKSD 525
+++A+NIL+ ++DFGL L + R + APE + T KSD
Sbjct: 134 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 193
Query: 526 VYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEE 584
V+SFG+LL E++T G+ P G+ P +Q++ R ++R N EE
Sbjct: 194 VWSFGILLTEIVTHGRIPYP------GMTNPEVIQNLER--------GYRMVRPDNCPEE 239
Query: 585 MVQLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
+ QL+++ C P+ RP + ++E+
Sbjct: 240 LYQLMRL---CWKERPEDRPTFDYLRSVLEDF 268
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 101/213 (47%), Gaps = 19/213 (8%)
Query: 352 EVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYY 411
+V+G GS G Y+A L + +V +K+V GK +++++ K+ H N+V LR F+Y
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQGKAFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 412 SKDEKL------LVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
S EK LV DY+PA H SR P+ + L R LA++H
Sbjct: 84 SSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHSF 141
Query: 466 GKIVHGNIKASNILLRPDHDAC-VSDFGLNPLFGNTTPPTRVAG---YRAPEVV-ETRKV 520
G I H +IK N+LL PD + DFG P YRAPE++
Sbjct: 142 G-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDY 200
Query: 521 TFKSDVYSFGVLLLELLTGKAPNQASLGEEGID 553
T DV+S G +L ELL G+ G+ G+D
Sbjct: 201 TSSIDVWSAGCVLAELLLGQP---IFPGDSGVD 230
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 100/207 (48%), Gaps = 13/207 (6%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSK 413
LG+G G + T V +K LK + F + +V+ K++H+ +V L A S+
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SE 250
Query: 414 DEKLLVYDYMPAGSLSALLHGSRGSG-RTPLDWDNRMRIALSAARGLAHLHVSGKIVHGN 472
+ +V +YM GSL L G G R P + +A A G+A++ VH +
Sbjct: 251 EPIYIVTEYMSKGSLLDFLKGETGKYLRLP----QLVDMAAQIASGMAYVE-RMNYVHRD 305
Query: 473 IKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVTFKSDVY 527
++A+NIL+ + V+DFGL L + R + APE + T KSDV+
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 365
Query: 528 SFGVLLLELLT-GKAPNQASLGEEGID 553
SFG+LL EL T G+ P + E +D
Sbjct: 366 SFGILLTELTTKGRVPYPGMVNREVLD 392
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 100/207 (48%), Gaps = 13/207 (6%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSK 413
LG+G G + T V +K LK + F + +V+ K++H+ +V L A S+
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SE 250
Query: 414 DEKLLVYDYMPAGSLSALLHGSRGSG-RTPLDWDNRMRIALSAARGLAHLHVSGKIVHGN 472
+ +V +YM GSL L G G R P + +A A G+A++ VH +
Sbjct: 251 EPIYIVTEYMSKGSLLDFLKGETGKYLRLP----QLVDMAAQIASGMAYVE-RMNYVHRD 305
Query: 473 IKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVTFKSDVY 527
++A+NIL+ + V+DFGL L + R + APE + T KSDV+
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 365
Query: 528 SFGVLLLELLT-GKAPNQASLGEEGID 553
SFG+LL EL T G+ P + E +D
Sbjct: 366 SFGILLTELTTKGRVPYPGMVNREVLD 392
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 124/272 (45%), Gaps = 28/272 (10%)
Query: 351 AEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFY 410
E LG G G + T V VK LK+ ++ F + ++ +++H +V L A
Sbjct: 24 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 411 YSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVH 470
+++ ++ +YM GSL L G L + + +A A G+A + +H
Sbjct: 84 -TQEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIE-ERNYIH 138
Query: 471 GNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVTFKSD 525
+++A+NIL+ ++DFGL L + R + APE + T KSD
Sbjct: 139 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 198
Query: 526 VYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEE 584
V+SFG+LL E++T G+ P G+ P +Q++ R ++R N EE
Sbjct: 199 VWSFGILLTEIVTHGRIPY------PGMTNPEVIQNLER--------GYRMVRPDNCPEE 244
Query: 585 MVQLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
+ QL+++ C P+ RP + ++E+
Sbjct: 245 LYQLMRL---CWKERPEDRPTFDYLRSVLEDF 273
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 100/207 (48%), Gaps = 13/207 (6%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSK 413
LG+G G + T V +K LK + F + +V+ K++H+ +V L A S+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SE 84
Query: 414 DEKLLVYDYMPAGSLSALLHGSRGSG-RTPLDWDNRMRIALSAARGLAHLHVSGKIVHGN 472
+ +V +YM GSL L G G R P + +A A G+A++ VH +
Sbjct: 85 EPIYIVIEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVE-RMNYVHRD 139
Query: 473 IKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVTFKSDVY 527
++A+NIL+ + V+DFGL L + R + APE + T KSDV+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 528 SFGVLLLELLT-GKAPNQASLGEEGID 553
SFG+LL EL T G+ P + E +D
Sbjct: 200 SFGILLTELTTKGRVPYPGMVNREVLD 226
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 124/272 (45%), Gaps = 28/272 (10%)
Query: 351 AEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFY 410
E LG G G + T V VK LK+ ++ F + ++ +++H +V L A
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 411 YSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVH 470
+++ ++ +YM GSL L G L + + +A A G+A + I H
Sbjct: 78 -TQEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIEERNYI-H 132
Query: 471 GNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVTFKSD 525
+++A+NIL+ ++DFGL L + R + APE + T KSD
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 526 VYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEE 584
V+SFG+LL E++T G+ P G+ P +Q++ R ++R N EE
Sbjct: 193 VWSFGILLTEIVTHGRIPYP------GMTNPEVIQNLER--------GYRMVRPDNCPEE 238
Query: 585 MVQLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
+ QL+++ C P+ RP + ++E+
Sbjct: 239 LYQLMRL---CWKERPEDRPTFDYLRSVLEDF 267
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 124/272 (45%), Gaps = 28/272 (10%)
Query: 351 AEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFY 410
E LG G G + T V VK LK+ ++ F + ++ +++H +V L A
Sbjct: 23 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 82
Query: 411 YSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVH 470
+++ ++ +YM GSL L G L + + +A A G+A + +H
Sbjct: 83 -TQEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIE-ERNYIH 137
Query: 471 GNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVTFKSD 525
+++A+NIL+ ++DFGL L + R + APE + T KSD
Sbjct: 138 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 197
Query: 526 VYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEE 584
V+SFG+LL E++T G+ P G+ P +Q++ R ++R N EE
Sbjct: 198 VWSFGILLTEIVTHGRIPYP------GMTNPEVIQNLER--------GYRMVRPDNCPEE 243
Query: 585 MVQLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
+ QL+++ C P+ RP + ++E+
Sbjct: 244 LYQLMRL---CWKERPEDRPTFDYLRSVLEDF 272
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 124/272 (45%), Gaps = 28/272 (10%)
Query: 351 AEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFY 410
E LG G G + T V VK LK+ ++ F + ++ +++H +V L A
Sbjct: 13 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 72
Query: 411 YSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVH 470
+++ ++ +YM GSL L G L + + +A A G+A + I H
Sbjct: 73 -TQEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIEERNYI-H 127
Query: 471 GNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVTFKSD 525
+++A+NIL+ ++DFGL L + R + APE + T KSD
Sbjct: 128 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 187
Query: 526 VYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEE 584
V+SFG+LL E++T G+ P G+ P +Q++ R ++R N EE
Sbjct: 188 VWSFGILLTEIVTHGRIPYP------GMTNPEVIQNLER--------GYRMVRPDNCPEE 233
Query: 585 MVQLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
+ QL+++ C P+ RP + ++E+
Sbjct: 234 LYQLMRL---CWKERPEDRPTFDYLRSVLEDF 262
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 100/207 (48%), Gaps = 13/207 (6%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSK 413
LG+G G + T V +K LK + F + +V+ K++H+ +V L A S+
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SE 74
Query: 414 DEKLLVYDYMPAGSLSALLHGSRGSG-RTPLDWDNRMRIALSAARGLAHLHVSGKIVHGN 472
+ +V +YM GSL L G G R P + +A A G+A++ VH +
Sbjct: 75 EPIXIVTEYMSKGSLLDFLKGETGKYLRLP----QLVDMAAQIASGMAYVE-RMNYVHRD 129
Query: 473 IKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVTFKSDVY 527
++A+NIL+ + V+DFGL L + R + APE + T KSDV+
Sbjct: 130 LRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVW 189
Query: 528 SFGVLLLELLT-GKAPNQASLGEEGID 553
SFG+LL EL T G+ P + E +D
Sbjct: 190 SFGILLTELTTKGRVPYPGMVNREVLD 216
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 124/272 (45%), Gaps = 28/272 (10%)
Query: 351 AEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFY 410
E LG G G + T V VK LK+ ++ F + ++ +++H +V L A
Sbjct: 28 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 87
Query: 411 YSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVH 470
+++ ++ +YM GSL L G L + + +A A G+A + +H
Sbjct: 88 -TQEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIE-ERNYIH 142
Query: 471 GNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVTFKSD 525
+++A+NIL+ ++DFGL L + R + APE + T KSD
Sbjct: 143 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 202
Query: 526 VYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEE 584
V+SFG+LL E++T G+ P G+ P +Q++ R ++R N EE
Sbjct: 203 VWSFGILLTEIVTHGRIPY------PGMTNPEVIQNLER--------GYRMVRPDNCPEE 248
Query: 585 MVQLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
+ QL+++ C P+ RP + ++E+
Sbjct: 249 LYQLMRL---CWKERPEDRPTFDYLRSVLEDF 277
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 100/207 (48%), Gaps = 13/207 (6%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSK 413
LG+G G + T V +K LK + F + +V+ K++H+ +V L A S+
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SE 73
Query: 414 DEKLLVYDYMPAGSLSALLHGSRGSG-RTPLDWDNRMRIALSAARGLAHLHVSGKIVHGN 472
+ +V +YM GSL L G G R P + +A A G+A++ VH +
Sbjct: 74 EPIYIVTEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVE-RMNYVHRD 128
Query: 473 IKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVTFKSDVY 527
++A+NIL+ + V+DFGL L + R + APE + T KSDV+
Sbjct: 129 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 188
Query: 528 SFGVLLLELLT-GKAPNQASLGEEGID 553
SFG+LL EL T G+ P + E +D
Sbjct: 189 SFGILLTELTTKGRVPYPGMVNREVLD 215
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 100/207 (48%), Gaps = 13/207 (6%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSK 413
LG+G G + T V +K LK + F + +V+ K++H+ +V L A S+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SE 84
Query: 414 DEKLLVYDYMPAGSLSALLHGSRGSG-RTPLDWDNRMRIALSAARGLAHLHVSGKIVHGN 472
+ +V +YM GSL L G G R P + +A A G+A++ VH +
Sbjct: 85 EPIYIVIEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVE-RMNYVHRD 139
Query: 473 IKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVTFKSDVY 527
++A+NIL+ + V+DFGL L + R + APE + T KSDV+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 528 SFGVLLLELLT-GKAPNQASLGEEGID 553
SFG+LL EL T G+ P + E +D
Sbjct: 200 SFGILLTELTTKGRVPYPGMVNREVLD 226
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 100/207 (48%), Gaps = 13/207 (6%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSK 413
LG+G G + T V +K LK + F + +V+ K++H+ +V L A S+
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SE 251
Query: 414 DEKLLVYDYMPAGSLSALLHGSRGSG-RTPLDWDNRMRIALSAARGLAHLHVSGKIVHGN 472
+ +V +YM GSL L G G R P + +A A G+A++ VH +
Sbjct: 252 EPIYIVTEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVE-RMNYVHRD 306
Query: 473 IKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVTFKSDVY 527
++A+NIL+ + V+DFGL L + R + APE + T KSDV+
Sbjct: 307 LRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 366
Query: 528 SFGVLLLELLT-GKAPNQASLGEEGID 553
SFG+LL EL T G+ P + E +D
Sbjct: 367 SFGILLTELTTKGRVPYPGMVNREVLD 393
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 100/207 (48%), Gaps = 13/207 (6%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSK 413
LG+G G + T V +K LK + F + +V+ K++H+ +V L A S+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SE 84
Query: 414 DEKLLVYDYMPAGSLSALLHGSRGSG-RTPLDWDNRMRIALSAARGLAHLHVSGKIVHGN 472
+ +V +YM GSL L G G R P + +A A G+A++ VH +
Sbjct: 85 EPIYIVCEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVE-RMNYVHRD 139
Query: 473 IKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVTFKSDVY 527
++A+NIL+ + V+DFGL L + R + APE + T KSDV+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 528 SFGVLLLELLT-GKAPNQASLGEEGID 553
SFG+LL EL T G+ P + E +D
Sbjct: 200 SFGILLTELTTKGRVPYPGMVNREVLD 226
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 100/207 (48%), Gaps = 13/207 (6%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSK 413
LG+G G + T V +K LK + F + +V+ K++H+ +V L A S+
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SE 77
Query: 414 DEKLLVYDYMPAGSLSALLHGSRGSG-RTPLDWDNRMRIALSAARGLAHLHVSGKIVHGN 472
+ +V +YM GSL L G G R P + +A A G+A++ VH +
Sbjct: 78 EPIYIVTEYMSKGSLLDFLKGETGKYLRLP----QLVDMAAQIASGMAYVE-RMNYVHRD 132
Query: 473 IKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVTFKSDVY 527
++A+NIL+ + V+DFGL L + R + APE + T KSDV+
Sbjct: 133 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 192
Query: 528 SFGVLLLELLT-GKAPNQASLGEEGID 553
SFG+LL EL T G+ P + E +D
Sbjct: 193 SFGILLTELTTKGRVPYPGMVNREVLD 219
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 100/207 (48%), Gaps = 13/207 (6%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSK 413
LG+G G + T V +K LK + F + +V+ K++H+ +V L A S+
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SE 75
Query: 414 DEKLLVYDYMPAGSLSALLHGSRGSG-RTPLDWDNRMRIALSAARGLAHLHVSGKIVHGN 472
+ +V +YM GSL L G G R P + +A A G+A++ VH +
Sbjct: 76 EPIYIVTEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVE-RMNYVHRD 130
Query: 473 IKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVTFKSDVY 527
++A+NIL+ + V+DFGL L + R + APE + T KSDV+
Sbjct: 131 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 190
Query: 528 SFGVLLLELLT-GKAPNQASLGEEGID 553
SFG+LL EL T G+ P + E +D
Sbjct: 191 SFGILLTELTTKGRVPYPGMVNREVLD 217
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 100/207 (48%), Gaps = 13/207 (6%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSK 413
LG+G G + T V +K LK + F + +V+ K++H+ +V L A S+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SE 84
Query: 414 DEKLLVYDYMPAGSLSALLHGSRGSG-RTPLDWDNRMRIALSAARGLAHLHVSGKIVHGN 472
+ +V +YM GSL L G G R P + +A A G+A++ VH +
Sbjct: 85 EPIYIVTEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVE-RMNYVHRD 139
Query: 473 IKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVTFKSDVY 527
++A+NIL+ + V+DFGL L + R + APE + T KSDV+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 528 SFGVLLLELLT-GKAPNQASLGEEGID 553
SFG+LL EL T G+ P + E +D
Sbjct: 200 SFGILLTELTTKGRVPYPGMVNREVLD 226
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 100/207 (48%), Gaps = 13/207 (6%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSK 413
LG+G G + T V +K LK + F + +V+ K++H+ +V L A S+
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SE 250
Query: 414 DEKLLVYDYMPAGSLSALLHGSRGSG-RTPLDWDNRMRIALSAARGLAHLHVSGKIVHGN 472
+ +V +YM GSL L G G R P + +A A G+A++ VH +
Sbjct: 251 EPIYIVGEYMSKGSLLDFLKGETGKYLRLP----QLVDMAAQIASGMAYVE-RMNYVHRD 305
Query: 473 IKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVTFKSDVY 527
++A+NIL+ + V+DFGL L + R + APE + T KSDV+
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 365
Query: 528 SFGVLLLELLT-GKAPNQASLGEEGID 553
SFG+LL EL T G+ P + E +D
Sbjct: 366 SFGILLTELTTKGRVPYPGMVNREVLD 392
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 104/210 (49%), Gaps = 14/210 (6%)
Query: 342 DLEDLLRASAEV---LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKI 398
D+ ++ R S ++ LG G G + T V +K LK + F + +++ K+
Sbjct: 2 DVWEIPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKL 61
Query: 399 KHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARG 458
KHD +V L A S++ +V +YM GSL L G GR L N + +A A G
Sbjct: 62 KHDKLVQLYAV-VSEEPIYIVTEYMNKGSLLDFLKD--GEGRA-LKLPNLVDMAAQVAAG 117
Query: 459 LAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPE 513
+A++ I H +++++NIL+ ++DFGL L + R + APE
Sbjct: 118 MAYIERMNYI-HRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPE 176
Query: 514 VVETRKVTFKSDVYSFGVLLLELLT-GKAP 542
+ T KSDV+SFG+LL EL+T G+ P
Sbjct: 177 AALYGRFTIKSDVWSFGILLTELVTKGRVP 206
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 99/206 (48%), Gaps = 11/206 (5%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSK 413
LG+G G + T V +K LK + F + +V+ K++H+ +V L A S+
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SE 333
Query: 414 DEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNI 473
+ +V +YM GSL L G G L + +A A G+A++ VH ++
Sbjct: 334 EPIYIVTEYMSKGSLLDFLKGETGKY---LRLPQLVDMAAQIASGMAYVE-RMNYVHRDL 389
Query: 474 KASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVTFKSDVYS 528
+A+NIL+ + V+DFGL L + R + APE + T KSDV+S
Sbjct: 390 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 449
Query: 529 FGVLLLELLT-GKAPNQASLGEEGID 553
FG+LL EL T G+ P + E +D
Sbjct: 450 FGILLTELTTKGRVPYPGMVNREVLD 475
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 100/213 (46%), Gaps = 19/213 (8%)
Query: 352 EVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYY 411
+V+G GS G Y+A L + +V +K+V KR +++++ K+ H N+V LR F+Y
Sbjct: 54 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 111
Query: 412 SKDEKL------LVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
S EK LV DY+P H SR P+ + L R LA++H
Sbjct: 112 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHSF 169
Query: 466 GKIVHGNIKASNILLRPDHDAC-VSDFGLNPLFGNTTPPTRVAG---YRAPEVV-ETRKV 520
G I H +IK N+LL PD + DFG P YRAPE++
Sbjct: 170 G-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDY 228
Query: 521 TFKSDVYSFGVLLLELLTGKAPNQASLGEEGID 553
T DV+S G +L ELL G+ G+ G+D
Sbjct: 229 TSSIDVWSAGCVLAELLLGQP---IFPGDSGVD 258
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 123/270 (45%), Gaps = 28/270 (10%)
Query: 354 LGKGSVGTSYKAVLEEGT-TVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYS 412
LG G G Y+ V ++ + TV VK LKE + EF + V+ +IKH N+V L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 413 KDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGN 472
+ ++ ++M G+L L R R ++ + +A + + +L +H +
Sbjct: 86 EPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLE-KKNFIHRD 141
Query: 473 IKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVTFKSDVY 527
+ A N L+ +H V+DFGL+ L T + APE + K + KSDV+
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 201
Query: 528 SFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMV 586
+FGVLL E+ T G +P GIDL + + + + D + R E++
Sbjct: 202 AFGVLLWEIATYGMSPYP------GIDLSQVYELLEK--------DYRMERPEGCPEKVY 247
Query: 587 QLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
+L++ C P RP+ E+ + E M
Sbjct: 248 ELMR---ACWQWNPSDRPSFAEIHQAFETM 274
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 100/213 (46%), Gaps = 19/213 (8%)
Query: 352 EVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYY 411
+V+G GS G Y+A L + +V +K+V KR +++++ K+ H N+V LR F+Y
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 117
Query: 412 SKDEKL------LVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
S EK LV DY+P H SR P+ + L R LA++H
Sbjct: 118 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHSF 175
Query: 466 GKIVHGNIKASNILLRPDHDAC-VSDFGLNPLFGNTTPPTRVAG---YRAPEVV-ETRKV 520
G I H +IK N+LL PD + DFG P YRAPE++
Sbjct: 176 G-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDY 234
Query: 521 TFKSDVYSFGVLLLELLTGKAPNQASLGEEGID 553
T DV+S G +L ELL G+ G+ G+D
Sbjct: 235 TSSIDVWSAGCVLAELLLGQP---IFPGDSGVD 264
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 123/270 (45%), Gaps = 28/270 (10%)
Query: 354 LGKGSVGTSYKAVLEEGT-TVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYS 412
LG G G Y+ V ++ + TV VK LKE + EF + V+ +IKH N+V L
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 413 KDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGN 472
+ ++ ++M G+L L R R ++ + +A + + +L +H +
Sbjct: 82 EPPFYIIIEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLE-KKNFIHRD 137
Query: 473 IKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVTFKSDVY 527
+ A N L+ +H V+DFGL+ L T + APE + K + KSDV+
Sbjct: 138 LAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 197
Query: 528 SFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMV 586
+FGVLL E+ T G +P GIDL + + + + D + R E++
Sbjct: 198 AFGVLLWEIATYGMSPYP------GIDLSQVYELLEK--------DYRMERPEGCPEKVY 243
Query: 587 QLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
+L++ C P RP+ E+ + E M
Sbjct: 244 ELMR---ACWQWNPSDRPSFAEIHQAFETM 270
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 100/213 (46%), Gaps = 19/213 (8%)
Query: 352 EVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYY 411
+V+G GS G Y+A L + +V +K+V KR +++++ K+ H N+V LR F+Y
Sbjct: 31 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 88
Query: 412 SKDEKL------LVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
S EK LV DY+P H SR P+ + L R LA++H
Sbjct: 89 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHSF 146
Query: 466 GKIVHGNIKASNILLRPDHDAC-VSDFGLNPLFGNTTPPTRVAG---YRAPEVV-ETRKV 520
G I H +IK N+LL PD + DFG P YRAPE++
Sbjct: 147 G-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDY 205
Query: 521 TFKSDVYSFGVLLLELLTGKAPNQASLGEEGID 553
T DV+S G +L ELL G+ G+ G+D
Sbjct: 206 TSSIDVWSAGCVLAELLLGQP---IFPGDSGVD 235
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 123/270 (45%), Gaps = 28/270 (10%)
Query: 354 LGKGSVGTSYKAVLEEGT-TVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYS 412
LG G G Y+ V ++ + TV VK LKE + EF + V+ +IKH N+V L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 413 KDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGN 472
+ ++ ++M G+L L R R ++ + +A + + +L +H +
Sbjct: 86 EPPFYIIIEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLE-KKNFIHRD 141
Query: 473 IKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVTFKSDVY 527
+ A N L+ +H V+DFGL+ L T + APE + K + KSDV+
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 201
Query: 528 SFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMV 586
+FGVLL E+ T G +P GIDL + + + + D + R E++
Sbjct: 202 AFGVLLWEIATYGMSPYP------GIDLSQVYELLEK--------DYRMERPEGCPEKVY 247
Query: 587 QLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
+L++ C P RP+ E+ + E M
Sbjct: 248 ELMR---ACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 100/213 (46%), Gaps = 19/213 (8%)
Query: 352 EVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYY 411
+V+G GS G Y+A L + +V +K+V KR +++++ K+ H N+V LR F+Y
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 412 SKDEKL------LVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
S EK LV DY+P H SR P+ + L R LA++H
Sbjct: 84 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHSF 141
Query: 466 GKIVHGNIKASNILLRPDHDAC-VSDFGLNPLFGNTTPPTRVAG---YRAPEVV-ETRKV 520
G I H +IK N+LL PD + DFG P YRAPE++
Sbjct: 142 G-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDY 200
Query: 521 TFKSDVYSFGVLLLELLTGKAPNQASLGEEGID 553
T DV+S G +L ELL G+ G+ G+D
Sbjct: 201 TSSIDVWSAGCVLAELLLGQP---IFPGDSGVD 230
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 100/213 (46%), Gaps = 19/213 (8%)
Query: 352 EVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYY 411
+V+G GS G Y+A L + +V +K+V KR +++++ K+ H N+V LR F+Y
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 117
Query: 412 SKDEKL------LVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
S EK LV DY+P H SR P+ + L R LA++H
Sbjct: 118 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHSF 175
Query: 466 GKIVHGNIKASNILLRPDHDAC-VSDFGLNPLFGNTTPPTRVAG---YRAPEVV-ETRKV 520
G I H +IK N+LL PD + DFG P YRAPE++
Sbjct: 176 G-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDY 234
Query: 521 TFKSDVYSFGVLLLELLTGKAPNQASLGEEGID 553
T DV+S G +L ELL G+ G+ G+D
Sbjct: 235 TSSIDVWSAGCVLAELLLGQP---IFPGDSGVD 264
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 100/213 (46%), Gaps = 19/213 (8%)
Query: 352 EVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYY 411
+V+G GS G Y+A L + +V +K+V KR +++++ K+ H N+V LR F+Y
Sbjct: 38 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 95
Query: 412 SKDEKL------LVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
S EK LV DY+P H SR P+ + L R LA++H
Sbjct: 96 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHSF 153
Query: 466 GKIVHGNIKASNILLRPDHDAC-VSDFGLNPLFGNTTPPTRVAG---YRAPEVV-ETRKV 520
G I H +IK N+LL PD + DFG P YRAPE++
Sbjct: 154 G-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDY 212
Query: 521 TFKSDVYSFGVLLLELLTGKAPNQASLGEEGID 553
T DV+S G +L ELL G+ G+ G+D
Sbjct: 213 TSSIDVWSAGCVLAELLLGQP---IFPGDSGVD 242
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 100/213 (46%), Gaps = 19/213 (8%)
Query: 352 EVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYY 411
+V+G GS G Y+A L + +V +K+V KR +++++ K+ H N+V LR F+Y
Sbjct: 45 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 102
Query: 412 SKDEKL------LVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
S EK LV DY+P H SR P+ + L R LA++H
Sbjct: 103 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHSF 160
Query: 466 GKIVHGNIKASNILLRPDHDAC-VSDFGLNPLFGNTTPPTRVAG---YRAPEVV-ETRKV 520
G I H +IK N+LL PD + DFG P YRAPE++
Sbjct: 161 G-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDY 219
Query: 521 TFKSDVYSFGVLLLELLTGKAPNQASLGEEGID 553
T DV+S G +L ELL G+ G+ G+D
Sbjct: 220 TSSIDVWSAGCVLAELLLGQP---IFPGDSGVD 249
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 100/213 (46%), Gaps = 19/213 (8%)
Query: 352 EVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYY 411
+V+G GS G Y+A L + +V +K+V KR +++++ K+ H N+V LR F+Y
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 412 SKDEKL------LVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
S EK LV DY+P H SR P+ + L R LA++H
Sbjct: 84 SSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHSF 141
Query: 466 GKIVHGNIKASNILLRPDHDAC-VSDFGLNPLFGNTTPPTRVAG---YRAPEVV-ETRKV 520
G I H +IK N+LL PD + DFG P YRAPE++
Sbjct: 142 G-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDY 200
Query: 521 TFKSDVYSFGVLLLELLTGKAPNQASLGEEGID 553
T DV+S G +L ELL G+ G+ G+D
Sbjct: 201 TSSIDVWSAGCVLAELLLGQP---IFPGDSGVD 230
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 99/207 (47%), Gaps = 13/207 (6%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSK 413
LG+G G + T V +K LK + F + +V+ K++H+ +V L A S+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SE 84
Query: 414 DEKLLVYDYMPAGSLSALLHGSRGSG-RTPLDWDNRMRIALSAARGLAHLHVSGKIVHGN 472
+ +V +YM G L L G G R P + +A A G+A++ VH +
Sbjct: 85 EPIYIVMEYMSKGCLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVE-RMNYVHRD 139
Query: 473 IKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVTFKSDVY 527
++A+NIL+ + V+DFGL L + R + APE + T KSDV+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 528 SFGVLLLELLT-GKAPNQASLGEEGID 553
SFG+LL EL T G+ P + E +D
Sbjct: 200 SFGILLTELTTKGRVPYPGMVNREVLD 226
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 100/213 (46%), Gaps = 19/213 (8%)
Query: 352 EVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYY 411
+V+G GS G Y+A L + +V +K+V KR +++++ K+ H N+V LR F+Y
Sbjct: 39 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 96
Query: 412 SKDEKL------LVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
S EK LV DY+P H SR P+ + L R LA++H
Sbjct: 97 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHSF 154
Query: 466 GKIVHGNIKASNILLRPDHDAC-VSDFGLNPLFGNTTPPTRVAG---YRAPEVV-ETRKV 520
G I H +IK N+LL PD + DFG P YRAPE++
Sbjct: 155 G-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDY 213
Query: 521 TFKSDVYSFGVLLLELLTGKAPNQASLGEEGID 553
T DV+S G +L ELL G+ G+ G+D
Sbjct: 214 TSSIDVWSAGCVLAELLLGQP---IFPGDSGVD 243
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 99/207 (47%), Gaps = 13/207 (6%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSK 413
LG+G G + T V +K LK + F + +V+ K++H+ +V L A S+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SE 84
Query: 414 DEKLLVYDYMPAGSLSALLHGSRGSG-RTPLDWDNRMRIALSAARGLAHLHVSGKIVHGN 472
+ +V +YM GSL L G G R P + +A A G+A++ VH +
Sbjct: 85 EPIYIVTEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVE-RMNYVHRD 139
Query: 473 IKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVTFKSDVY 527
+ A+NIL+ + V+DFGL L + R + APE + T KSDV+
Sbjct: 140 LAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 528 SFGVLLLELLT-GKAPNQASLGEEGID 553
SFG+LL EL T G+ P + E +D
Sbjct: 200 SFGILLTELTTKGRVPYPGMVNREVLD 226
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 100/213 (46%), Gaps = 19/213 (8%)
Query: 352 EVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYY 411
+V+G GS G Y+A L + +V +K+V KR +++++ K+ H N+V LR F+Y
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 412 SKDEKL------LVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
S EK LV DY+P H SR P+ + L R LA++H
Sbjct: 84 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHSF 141
Query: 466 GKIVHGNIKASNILLRPDHDAC-VSDFGLNPLFGNTTPPTRVAG---YRAPEVV-ETRKV 520
G I H +IK N+LL PD + DFG P YRAPE++
Sbjct: 142 G-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDY 200
Query: 521 TFKSDVYSFGVLLLELLTGKAPNQASLGEEGID 553
T DV+S G +L ELL G+ G+ G+D
Sbjct: 201 TSSIDVWSAGCVLAELLLGQP---IFPGDSGVD 230
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 100/213 (46%), Gaps = 19/213 (8%)
Query: 352 EVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYY 411
+V+G GS G Y+A L + +V +K+V KR +++++ K+ H N+V LR F+Y
Sbjct: 64 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 121
Query: 412 SKDEKL------LVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
S EK LV DY+P H SR P+ + L R LA++H
Sbjct: 122 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHSF 179
Query: 466 GKIVHGNIKASNILLRPDHDAC-VSDFGLNPLFGNTTPPTRVAG---YRAPEVV-ETRKV 520
G I H +IK N+LL PD + DFG P YRAPE++
Sbjct: 180 G-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDY 238
Query: 521 TFKSDVYSFGVLLLELLTGKAPNQASLGEEGID 553
T DV+S G +L ELL G+ G+ G+D
Sbjct: 239 TSSIDVWSAGCVLAELLLGQP---IFPGDSGVD 268
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 100/207 (48%), Gaps = 13/207 (6%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSK 413
LG+G G + T V +K LK + F + +V+ K++H+ +V L A S+
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SE 81
Query: 414 DEKLLVYDYMPAGSLSALLHGSRGSG-RTPLDWDNRMRIALSAARGLAHLHVSGKIVHGN 472
+ +V +YM GSL L G G R P D +IA G+A++ VH +
Sbjct: 82 EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIA----SGMAYVE-RMNYVHRD 136
Query: 473 IKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVTFKSDVY 527
++A+NIL+ + V+DFGL L + R + APE + T KSDV+
Sbjct: 137 LRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVW 196
Query: 528 SFGVLLLELLT-GKAPNQASLGEEGID 553
SFG+LL EL T G+ P + E +D
Sbjct: 197 SFGILLTELTTKGRVPYPGMVNREVLD 223
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 100/213 (46%), Gaps = 19/213 (8%)
Query: 352 EVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYY 411
+V+G GS G Y+A L + +V +K+V KR +++++ K+ H N+V LR F+Y
Sbjct: 62 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 119
Query: 412 SKDEKL------LVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
S EK LV DY+P H SR P+ + L R LA++H
Sbjct: 120 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHSF 177
Query: 466 GKIVHGNIKASNILLRPDHDAC-VSDFGLNPLFGNTTPPTRVAG---YRAPEVV-ETRKV 520
G I H +IK N+LL PD + DFG P YRAPE++
Sbjct: 178 G-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDY 236
Query: 521 TFKSDVYSFGVLLLELLTGKAPNQASLGEEGID 553
T DV+S G +L ELL G+ G+ G+D
Sbjct: 237 TSSIDVWSAGCVLAELLLGQP---IFPGDSGVD 266
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 100/213 (46%), Gaps = 19/213 (8%)
Query: 352 EVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYY 411
+V+G GS G Y+A L + +V +K+V KR +++++ K+ H N+V LR F+Y
Sbjct: 27 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 84
Query: 412 SKDEKL------LVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
S EK LV DY+P H SR P+ + L R LA++H
Sbjct: 85 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHSF 142
Query: 466 GKIVHGNIKASNILLRPDHDAC-VSDFGLNPLFGNTTPPTRVAG---YRAPEVV-ETRKV 520
G I H +IK N+LL PD + DFG P YRAPE++
Sbjct: 143 G-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDY 201
Query: 521 TFKSDVYSFGVLLLELLTGKAPNQASLGEEGID 553
T DV+S G +L ELL G+ G+ G+D
Sbjct: 202 TSSIDVWSAGCVLAELLLGQP---IFPGDSGVD 231
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 100/213 (46%), Gaps = 19/213 (8%)
Query: 352 EVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYY 411
+V+G GS G Y+A L + +V +K+V KR +++++ K+ H N+V LR F+Y
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 412 SKDEKL------LVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
S EK LV DY+P H SR P+ + L R LA++H
Sbjct: 84 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHSF 141
Query: 466 GKIVHGNIKASNILLRPDHDAC-VSDFGLNPLFGNTTPPTRVAG---YRAPEVV-ETRKV 520
G I H +IK N+LL PD + DFG P YRAPE++
Sbjct: 142 G-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDY 200
Query: 521 TFKSDVYSFGVLLLELLTGKAPNQASLGEEGID 553
T DV+S G +L ELL G+ G+ G+D
Sbjct: 201 TSSIDVWSAGCVLAELLLGQP---IFPGDSGVD 230
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 123/270 (45%), Gaps = 28/270 (10%)
Query: 354 LGKGSVGTSYKAVLEEGT-TVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYS 412
LG G G Y+ V ++ + TV VK LKE + EF + V+ +IKH N+V L
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 84
Query: 413 KDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGN 472
+ ++ ++M G+L L R R ++ + +A + + +L +H +
Sbjct: 85 EPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLE-KKNFIHRD 140
Query: 473 IKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVTFKSDVY 527
+ A N L+ +H V+DFGL+ L T + APE + K + KSDV+
Sbjct: 141 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 200
Query: 528 SFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMV 586
+FGVLL E+ T G +P GIDL + + + + D + R E++
Sbjct: 201 AFGVLLWEIATYGMSPYP------GIDLSQVYELLEK--------DYRMERPEGCPEKVY 246
Query: 587 QLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
+L++ C P RP+ E+ + E M
Sbjct: 247 ELMR---ACWQWNPSDRPSFAEIHQAFETM 273
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 100/213 (46%), Gaps = 19/213 (8%)
Query: 352 EVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYY 411
+V+G GS G Y+A L + +V +K+V GK +++++ K+ H N+V LR F+Y
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQGKAFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 412 SKDEKL------LVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
S EK LV DY+P H SR P+ + L R LA++H
Sbjct: 84 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHSF 141
Query: 466 GKIVHGNIKASNILLRPDHDAC-VSDFGLNPLFGNTTPPTRVAG---YRAPEVV-ETRKV 520
G I H +IK N+LL PD + DFG P YRAPE++
Sbjct: 142 G-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDY 200
Query: 521 TFKSDVYSFGVLLLELLTGKAPNQASLGEEGID 553
T DV+S G +L ELL G+ G+ G+D
Sbjct: 201 TSSIDVWSAGCVLAELLLGQP---IFPGDSGVD 230
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 100/213 (46%), Gaps = 19/213 (8%)
Query: 352 EVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYY 411
+V+G GS G Y+A L + +V +K+V KR +++++ K+ H N+V LR F+Y
Sbjct: 105 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 162
Query: 412 SKDEKL------LVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
S EK LV DY+P H SR P+ + L R LA++H
Sbjct: 163 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHSF 220
Query: 466 GKIVHGNIKASNILLRPDHDAC-VSDFGLNPLFGNTTPPTRVAG---YRAPEVV-ETRKV 520
G I H +IK N+LL PD + DFG P YRAPE++
Sbjct: 221 G-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDY 279
Query: 521 TFKSDVYSFGVLLLELLTGKAPNQASLGEEGID 553
T DV+S G +L ELL G+ G+ G+D
Sbjct: 280 TSSIDVWSAGCVLAELLLGQP---IFPGDSGVD 309
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 100/213 (46%), Gaps = 19/213 (8%)
Query: 352 EVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYY 411
+V+G GS G Y+A L + +V +K+V KR +++++ K+ H N+V LR F+Y
Sbjct: 30 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 87
Query: 412 SKDEKL------LVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
S EK LV DY+P H SR P+ + L R LA++H
Sbjct: 88 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHSF 145
Query: 466 GKIVHGNIKASNILLRPDHDAC-VSDFGLNPLFGNTTPPTRVAG---YRAPEVV-ETRKV 520
G I H +IK N+LL PD + DFG P YRAPE++
Sbjct: 146 G-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDY 204
Query: 521 TFKSDVYSFGVLLLELLTGKAPNQASLGEEGID 553
T DV+S G +L ELL G+ G+ G+D
Sbjct: 205 TSSIDVWSAGCVLAELLLGQP---IFPGDSGVD 234
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 100/213 (46%), Gaps = 19/213 (8%)
Query: 352 EVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYY 411
+V+G GS G Y+A L + +V +K+V GK +++++ K+ H N+V LR F+Y
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQGKAFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 412 SKDEKL------LVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
S EK LV DY+P H SR P+ + L R LA++H
Sbjct: 84 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHSF 141
Query: 466 GKIVHGNIKASNILLRPDHDAC-VSDFGLNPLFGNTTPPTRVAG---YRAPEVV-ETRKV 520
G I H +IK N+LL PD + DFG P YRAPE++
Sbjct: 142 G-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDY 200
Query: 521 TFKSDVYSFGVLLLELLTGKAPNQASLGEEGID 553
T DV+S G +L ELL G+ G+ G+D
Sbjct: 201 TSSIDVWSAGCVLAELLLGQP---IFPGDSGVD 230
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 100/213 (46%), Gaps = 19/213 (8%)
Query: 352 EVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYY 411
+V+G GS G Y+A L + +V +K+V KR +++++ K+ H N+V LR F+Y
Sbjct: 34 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 91
Query: 412 SKDEKL------LVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
S EK LV DY+P H SR P+ + L R LA++H
Sbjct: 92 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHSF 149
Query: 466 GKIVHGNIKASNILLRPDHDAC-VSDFGLNPLFGNTTPPTRVAG---YRAPEVV-ETRKV 520
G I H +IK N+LL PD + DFG P YRAPE++
Sbjct: 150 G-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDY 208
Query: 521 TFKSDVYSFGVLLLELLTGKAPNQASLGEEGID 553
T DV+S G +L ELL G+ G+ G+D
Sbjct: 209 TSSIDVWSAGCVLAELLLGQP---IFPGDSGVD 238
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 123/270 (45%), Gaps = 28/270 (10%)
Query: 354 LGKGSVGTSYKAVLEEGT-TVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYS 412
LG G G Y+ V ++ + TV VK LKE + EF + V+ +IKH N+V L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 413 KDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGN 472
+ ++ ++M G+L L R R ++ + +A + + +L +H +
Sbjct: 86 EPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLE-KKNFIHRD 141
Query: 473 IKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVTFKSDVY 527
+ A N L+ +H V+DFGL+ L T + APE + K + KSDV+
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 201
Query: 528 SFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMV 586
+FGVLL E+ T G +P GIDL + + + + D + R E++
Sbjct: 202 AFGVLLWEIATYGMSPYP------GIDLSQVYELLEK--------DYRMERPEGCPEKVY 247
Query: 587 QLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
+L++ C P RP+ E+ + E M
Sbjct: 248 ELMR---ACWQWNPSDRPSFAEIHQAFETM 274
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 100/207 (48%), Gaps = 13/207 (6%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSK 413
LG+G G + T V +K LK + F + +V+ K++H+ +V L A S+
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SE 81
Query: 414 DEKLLVYDYMPAGSLSALLHGSRGSG-RTPLDWDNRMRIALSAARGLAHLHVSGKIVHGN 472
+ +V +YM GSL L G G R P D +IA G+A++ VH +
Sbjct: 82 EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIA----SGMAYVE-RMNYVHRD 136
Query: 473 IKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVTFKSDVY 527
++A+NIL+ + V+DFGL L + R + APE + T KSDV+
Sbjct: 137 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 196
Query: 528 SFGVLLLELLT-GKAPNQASLGEEGID 553
SFG+LL EL T G+ P + E +D
Sbjct: 197 SFGILLTELTTKGRVPYPGMVNREVLD 223
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 123/270 (45%), Gaps = 28/270 (10%)
Query: 354 LGKGSVGTSYKAVLEEGT-TVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYS 412
LG G G Y+ V ++ + TV VK LKE + EF + V+ +IKH N+V L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 413 KDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGN 472
+ ++ ++M G+L L R R ++ + +A + + +L +H +
Sbjct: 86 EPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLE-KKNFIHRD 141
Query: 473 IKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVTFKSDVY 527
+ A N L+ +H V+DFGL+ L T + APE + K + KSDV+
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 201
Query: 528 SFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMV 586
+FGVLL E+ T G +P GIDL + + + + D + R E++
Sbjct: 202 AFGVLLWEIATYGMSPYP------GIDLSQVYELLEK--------DYRMERPEGCPEKVY 247
Query: 587 QLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
+L++ C P RP+ E+ + E M
Sbjct: 248 ELMR---ACWQWNPSDRPSFAEIHQAFETM 274
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 123/270 (45%), Gaps = 28/270 (10%)
Query: 354 LGKGSVGTSYKAVLEEGT-TVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYS 412
LG G G Y+ V ++ + TV VK LKE + EF + V+ +IKH N+V L
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 93
Query: 413 KDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGN 472
+ ++ ++M G+L L R R ++ + +A + + +L +H +
Sbjct: 94 EPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLE-KKNFIHRD 149
Query: 473 IKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVTFKSDVY 527
+ A N L+ +H V+DFGL+ L T + APE + K + KSDV+
Sbjct: 150 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 209
Query: 528 SFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMV 586
+FGVLL E+ T G +P GIDL + + + + D + R E++
Sbjct: 210 AFGVLLWEIATYGMSPYP------GIDLSQVYELLEK--------DYRMERPEGCPEKVY 255
Query: 587 QLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
+L++ C P RP+ E+ + E M
Sbjct: 256 ELMR---ACWQWNPSDRPSFAEIHQAFETM 282
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 100/213 (46%), Gaps = 19/213 (8%)
Query: 352 EVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYY 411
+V+G GS G Y+A L + +V +K+V KR +++++ K+ H N+V LR F+Y
Sbjct: 38 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 95
Query: 412 SKDEKL------LVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
S EK LV DY+P H SR P+ + L R LA++H
Sbjct: 96 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIHSF 153
Query: 466 GKIVHGNIKASNILLRPDHDAC-VSDFGLNPLFGNTTPPTRVAG---YRAPEVV-ETRKV 520
G I H +IK N+LL PD + DFG P YRAPE++
Sbjct: 154 G-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDY 212
Query: 521 TFKSDVYSFGVLLLELLTGKAPNQASLGEEGID 553
T DV+S G +L ELL G+ G+ G+D
Sbjct: 213 TSSIDVWSAGCVLAELLLGQP---IFPGDSGVD 242
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 123/270 (45%), Gaps = 28/270 (10%)
Query: 354 LGKGSVGTSYKAVLEEGT-TVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYS 412
LG G G Y+ V ++ + TV VK LKE + EF + V+ +IKH N+V L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 413 KDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGN 472
+ ++ ++M G+L L R R ++ + +A + + +L +H +
Sbjct: 81 EPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLE-KKNFIHRD 136
Query: 473 IKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVTFKSDVY 527
+ A N L+ +H V+DFGL+ L T + APE + K + KSDV+
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 196
Query: 528 SFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMV 586
+FGVLL E+ T G +P GIDL + + + + D + R E++
Sbjct: 197 AFGVLLWEIATYGMSPYP------GIDLSQVYELLEK--------DYRMERPEGCPEKVY 242
Query: 587 QLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
+L++ C P RP+ E+ + E M
Sbjct: 243 ELMR---ACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 123/270 (45%), Gaps = 28/270 (10%)
Query: 354 LGKGSVGTSYKAVLEEGT-TVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYS 412
LG G G Y+ V ++ + TV VK LKE + EF + V+ +IKH N+V L
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 413 KDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGN 472
+ ++ ++M G+L L R R ++ + +A + + +L +H +
Sbjct: 83 EPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLE-KKNFIHRD 138
Query: 473 IKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVTFKSDVY 527
+ A N L+ +H V+DFGL+ L T + APE + K + KSDV+
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 198
Query: 528 SFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMV 586
+FGVLL E+ T G +P GIDL + + + + D + R E++
Sbjct: 199 AFGVLLWEIATYGMSPYP------GIDLSQVYELLEK--------DYRMERPEGCPEKVY 244
Query: 587 QLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
+L++ C P RP+ E+ + E M
Sbjct: 245 ELMR---ACWQWNPSDRPSFAEIHQAFETM 271
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 99/207 (47%), Gaps = 13/207 (6%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSK 413
LG+G G + T V +K LK + F + +V+ K++H+ +V L A S+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SE 84
Query: 414 DEKLLVYDYMPAGSLSALLHGSRGSG-RTPLDWDNRMRIALSAARGLAHLHVSGKIVHGN 472
+ +V +YM G L L G G R P + +A A G+A++ VH +
Sbjct: 85 EPIYIVTEYMSKGCLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVE-RMNYVHRD 139
Query: 473 IKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVTFKSDVY 527
++A+NIL+ + V+DFGL L + R + APE + T KSDV+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 528 SFGVLLLELLT-GKAPNQASLGEEGID 553
SFG+LL EL T G+ P + E +D
Sbjct: 200 SFGILLTELTTKGRVPYPGMVNREVLD 226
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 123/270 (45%), Gaps = 28/270 (10%)
Query: 354 LGKGSVGTSYKAVLEEGT-TVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYS 412
LG G G Y+ V ++ + TV VK LKE + EF + V+ +IKH N+V L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 413 KDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGN 472
+ ++ ++M G+L L R R ++ + +A + + +L +H +
Sbjct: 81 EPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLE-KKNFIHRD 136
Query: 473 IKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVTFKSDVY 527
+ A N L+ +H V+DFGL+ L T + APE + K + KSDV+
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 196
Query: 528 SFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMV 586
+FGVLL E+ T G +P GIDL + + + + D + R E++
Sbjct: 197 AFGVLLWEIATYGMSPYP------GIDLSQVYELLEK--------DYRMERPEGCPEKVY 242
Query: 587 QLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
+L++ C P RP+ E+ + E M
Sbjct: 243 ELMR---ACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 123/270 (45%), Gaps = 28/270 (10%)
Query: 354 LGKGSVGTSYKAVLEEGT-TVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYS 412
LG G G Y+ V ++ + TV VK LKE + EF + V+ +IKH N+V L
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 413 KDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGN 472
+ ++ ++M G+L L R R ++ + +A + + +L +H +
Sbjct: 83 EPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLE-KKNFIHRD 138
Query: 473 IKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVTFKSDVY 527
+ A N L+ +H V+DFGL+ L T + APE + K + KSDV+
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 198
Query: 528 SFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMV 586
+FGVLL E+ T G +P GIDL + + + + D + R E++
Sbjct: 199 AFGVLLWEIATYGMSPYP------GIDLSQVYELLEK--------DYRMERPEGCPEKVY 244
Query: 587 QLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
+L++ C P RP+ E+ + E M
Sbjct: 245 ELMR---ACWQWNPSDRPSFAEIHQAFETM 271
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 122/270 (45%), Gaps = 28/270 (10%)
Query: 354 LGKGSVGTSYKAVLEEGT-TVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYS 412
LG G G Y+ V ++ + TV VK LKE + EF + V+ +IKH N+V L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 413 KDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGN 472
+ ++ ++M G+L L R R + + +A + + +L +H +
Sbjct: 81 EPPFYIIIEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLE-KKNFIHRD 136
Query: 473 IKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVTFKSDVY 527
+ A N L+ +H V+DFGL+ L T + APE + K + KSDV+
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 196
Query: 528 SFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMV 586
+FGVLL E+ T G +P GIDL + + + + D + R E++
Sbjct: 197 AFGVLLWEIATYGMSPYP------GIDLSQVYELLEK--------DYRMERPEGCPEKVY 242
Query: 587 QLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
+L++ C P RP+ E+ + E M
Sbjct: 243 ELMR---ACWQWNPSDRPSFAEIHQAFETM 269
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 122/270 (45%), Gaps = 28/270 (10%)
Query: 354 LGKGSVGTSYKAVLEEGT-TVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYS 412
LG G G Y+ V ++ + TV VK LKE + EF + V+ +IKH N+V L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 413 KDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGN 472
+ ++ ++M G+L L R R + + +A + + +L +H +
Sbjct: 86 EPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLE-KKNFIHRD 141
Query: 473 IKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVTFKSDVY 527
+ A N L+ +H V+DFGL+ L T + APE + K + KSDV+
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 201
Query: 528 SFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMV 586
+FGVLL E+ T G +P GIDL + + + + D + R E++
Sbjct: 202 AFGVLLWEIATYGMSPYP------GIDLSQVYELLEK--------DYRMERPEGCPEKVY 247
Query: 587 QLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
+L++ C P RP+ E+ + E M
Sbjct: 248 ELMR---ACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 127/270 (47%), Gaps = 28/270 (10%)
Query: 354 LGKGSVGTSYKAVLEEGT-TVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYS 412
LG G G Y+ V ++ + TV VK LKE + EF + V+ +IKH N+V L
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 413 KDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGN 472
+ ++ ++M G+L L R R ++ + +A + + +L +H +
Sbjct: 82 EPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLE-KKNFIHRD 137
Query: 473 IKASNILLRPDHDACVSDFGLNPLF-GNT-TPPTRVA---GYRAPEVVETRKVTFKSDVY 527
+ A N L+ +H V+DFGL+ L G+T T P + APE + K + KSDV+
Sbjct: 138 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVW 197
Query: 528 SFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMV 586
+FGVLL E+ T G +P GIDL + + + + D + R E++
Sbjct: 198 AFGVLLWEIATYGMSPYP------GIDLSQVYELLEK--------DYRMERPEGCPEKVY 243
Query: 587 QLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
+L++ C P RP+ E+ + E M
Sbjct: 244 ELMR---ACWQWNPSDRPSFAEIHQAFETM 270
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 122/270 (45%), Gaps = 28/270 (10%)
Query: 354 LGKGSVGTSYKAVLEEGT-TVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYS 412
LG G G Y+ V ++ + TV VK LKE + EF + V+ +IKH N+V L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 413 KDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGN 472
+ ++ ++M G+L L R R + + +A + + +L +H +
Sbjct: 81 EPPFYIIIEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLE-KKNFIHRD 136
Query: 473 IKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVTFKSDVY 527
+ A N L+ +H V+DFGL+ L T + APE + K + KSDV+
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 196
Query: 528 SFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMV 586
+FGVLL E+ T G +P GIDL + + + + D + R E++
Sbjct: 197 AFGVLLWEIATYGMSPYP------GIDLSQVYELLEK--------DYRMERPEGCPEKVY 242
Query: 587 QLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
+L++ C P RP+ E+ + E M
Sbjct: 243 ELMR---ACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 127/270 (47%), Gaps = 28/270 (10%)
Query: 354 LGKGSVGTSYKAVLEEGT-TVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYS 412
LG G G Y+ V ++ + TV VK LKE + EF + V+ +IKH N+V L
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 413 KDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGN 472
+ ++ ++M G+L L R R ++ + +A + + +L +H +
Sbjct: 83 EPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLE-KKNFIHRD 138
Query: 473 IKASNILLRPDHDACVSDFGLNPLF-GNT-TPPTRVA---GYRAPEVVETRKVTFKSDVY 527
+ A N L+ +H V+DFGL+ L G+T T P + APE + K + KSDV+
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVW 198
Query: 528 SFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMV 586
+FGVLL E+ T G +P GIDL + + + + D + R E++
Sbjct: 199 AFGVLLWEIATYGMSPYP------GIDLSQVYELLEK--------DYRMERPEGCPEKVY 244
Query: 587 QLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
+L++ C P RP+ E+ + E M
Sbjct: 245 ELMR---ACWQWNPSDRPSFAEIHQAFETM 271
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 122/270 (45%), Gaps = 28/270 (10%)
Query: 354 LGKGSVGTSYKAVLEEGT-TVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYS 412
LG G G Y+ V ++ + TV VK LKE + EF + V+ +IKH N+V L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 413 KDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGN 472
+ ++ ++M G+L L R R + + +A + + +L +H +
Sbjct: 81 EPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLE-KKNFIHRD 136
Query: 473 IKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVTFKSDVY 527
+ A N L+ +H V+DFGL+ L T + APE + K + KSDV+
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 196
Query: 528 SFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMV 586
+FGVLL E+ T G +P GIDL + + + + D + R E++
Sbjct: 197 AFGVLLWEIATYGMSPYP------GIDLSQVYELLEK--------DYRMERPEGCPEKVY 242
Query: 587 QLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
+L++ C P RP+ E+ + E M
Sbjct: 243 ELMR---ACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 122/270 (45%), Gaps = 28/270 (10%)
Query: 354 LGKGSVGTSYKAVLEEGT-TVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYS 412
LG G G Y+ V ++ + TV VK LKE + EF + V+ +IKH N+V L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 413 KDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGN 472
+ ++ ++M G+L L R R + + +A + + +L +H +
Sbjct: 81 EPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLE-KKNFIHRD 136
Query: 473 IKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVTFKSDVY 527
+ A N L+ +H V+DFGL+ L T + APE + K + KSDV+
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 196
Query: 528 SFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMV 586
+FGVLL E+ T G +P GIDL + + + + D + R E++
Sbjct: 197 AFGVLLWEIATYGMSPYP------GIDLSQVYELLEK--------DYRMERPEGCPEKVY 242
Query: 587 QLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
+L++ C P RP+ E+ + E M
Sbjct: 243 ELMR---ACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 122/270 (45%), Gaps = 28/270 (10%)
Query: 354 LGKGSVGTSYKAVLEEGT-TVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYS 412
LG G G Y+ V ++ + TV VK LKE + EF + V+ +IKH N+V L
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 413 KDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGN 472
+ ++ ++M G+L L R R + + +A + + +L +H +
Sbjct: 79 EPPFYIIIEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLE-KKNFIHRD 134
Query: 473 IKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVTFKSDVY 527
+ A N L+ +H V+DFGL+ L T + APE + K + KSDV+
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 194
Query: 528 SFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMV 586
+FGVLL E+ T G +P GID P V ++ + D + R E++
Sbjct: 195 AFGVLLWEIATYGMSPYP------GID-PSQVYELLEK-------DYRMERPEGCPEKVY 240
Query: 587 QLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
+L++ C P RP+ E+ + E M
Sbjct: 241 ELMR---ACWQWNPSDRPSFAEIHQAFETM 267
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 352 EVLGKGS---VGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRA 408
EV+G G+ V +Y A +E + L++ E +++ + + H N+V
Sbjct: 21 EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYT 80
Query: 409 FYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTP---LDWDNRMRIALSAARGLAHLHVS 465
+ KDE LV + GS+ ++ G LD I GL +LH +
Sbjct: 81 SFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN 140
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTR---------VAGYRAPEVVE 516
G+I H ++KA NILL D ++DFG++ TR + APEV+E
Sbjct: 141 GQI-HRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVME 199
Query: 517 -TRKVTFKSDVYSFGVLLLELLTGKAP 542
R FK+D++SFG+ +EL TG AP
Sbjct: 200 QVRGYDFKADIWSFGITAIELATGAAP 226
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 99/208 (47%), Gaps = 24/208 (11%)
Query: 352 EVLGKGSVGTSYKAVLEEGTTVVVKRLK-----EVAVGKREFEMQMEVLGKIKHDNVVPL 406
E++G G G Y+A G V VK + +++ + ++ +KH N++ L
Sbjct: 13 EIIGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIAL 71
Query: 407 RAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSG 466
R + LV ++ G L+ +L G R ++W A+ ARG+ +LH
Sbjct: 72 RGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNW------AVQIARGMNYLHDEA 125
Query: 467 --KIVHGNIKASNILLRPDHD--------ACVSDFGLNPLFGNTTPPTRVAGY--RAPEV 514
I+H ++K+SNIL+ + ++DFGL + TT + Y APEV
Sbjct: 126 IVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEV 185
Query: 515 VETRKVTFKSDVYSFGVLLLELLTGKAP 542
+ + SDV+S+GVLL ELLTG+ P
Sbjct: 186 IRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 131/288 (45%), Gaps = 32/288 (11%)
Query: 339 YSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEM---QMEVL 395
Y +++E + +G GS GT YK + V VK LK V +F+ ++ VL
Sbjct: 29 YYWEIEASEVMLSTRIGSGSFGTVYKG--KWHGDVAVKILKVVDPTPEQFQAFRNEVAVL 86
Query: 396 GKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSA 455
K +H N++ L Y +KD +V + SL LH T + IA
Sbjct: 87 RKTRHVNIL-LFMGYMTKDNLAIVTQWCEGSSLYKHLHVQE----TKFQMFQLIDIARQT 141
Query: 456 ARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFG------NTTPPTRVAGY 509
A+G+ +LH I+H ++K++NI L + DFGL + PT +
Sbjct: 142 AQGMDYLHAKN-IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLW 200
Query: 510 RAPEVVETRK---VTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEW 566
APEV+ + +F+SDVYS+G++L EL+TG+ P + I + V R
Sbjct: 201 MAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQI-----IFMVGRGYA 255
Query: 567 TAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIE 614
+ ++ + Y N + M +L+ CV V ++RP +++ IE
Sbjct: 256 SPDLSKL----YKNCPKAMKRLV---ADCVKKVKEERPLFPQILSSIE 296
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 352 EVLGKGS---VGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRA 408
EV+G G+ V +Y A +E + L++ E +++ + + H N+V
Sbjct: 16 EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYT 75
Query: 409 FYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTP---LDWDNRMRIALSAARGLAHLHVS 465
+ KDE LV + GS+ ++ G LD I GL +LH +
Sbjct: 76 SFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN 135
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTR---------VAGYRAPEVVE 516
G+I H ++KA NILL D ++DFG++ TR + APEV+E
Sbjct: 136 GQI-HRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVME 194
Query: 517 -TRKVTFKSDVYSFGVLLLELLTGKAP 542
R FK+D++SFG+ +EL TG AP
Sbjct: 195 QVRGYDFKADIWSFGITAIELATGAAP 221
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 122/270 (45%), Gaps = 28/270 (10%)
Query: 354 LGKGSVGTSYKAVLEEGT-TVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYS 412
LG G G Y+ V ++ + TV VK LKE + EF + V+ +IKH N+V L
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 413 KDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGN 472
+ ++ ++M G+L L R R + + +A + + +L +H +
Sbjct: 79 EPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLE-KKNFIHRD 134
Query: 473 IKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVTFKSDVY 527
+ A N L+ +H V+DFGL+ L T + APE + K + KSDV+
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 194
Query: 528 SFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMV 586
+FGVLL E+ T G +P GID P V ++ + D + R E++
Sbjct: 195 AFGVLLWEIATYGMSPYP------GID-PSQVYELLEK-------DYRMERPEGCPEKVY 240
Query: 587 QLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
+L++ C P RP+ E+ + E M
Sbjct: 241 ELMR---ACWQWNPSDRPSFAEIHQAFETM 267
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 103/208 (49%), Gaps = 27/208 (12%)
Query: 351 AEVLGKGSVGTSYKAVLEE-GTTVVVKRLKEV-AVGKREFEMQMEVLGKIKHDNVVPLRA 408
EVLGKG G + K E G +V+K L +R F +++V+ ++H NV+
Sbjct: 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIG 74
Query: 409 FYYSKDEKL-LVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGK 467
Y KD++L + +Y+ G+L ++ S + W R+ A A G+A+LH S
Sbjct: 75 VLY-KDKRLNFITEYIKGGTLRGIIK----SMDSQYPWSQRVSFAKDIASGMAYLH-SMN 128
Query: 468 IVHGNIKASNILLRPDHDACVSDFGLNPLFGN--TTP--------PTRVAGY-------- 509
I+H ++ + N L+R + + V+DFGL L + T P P R Y
Sbjct: 129 IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYW 188
Query: 510 RAPEVVETRKVTFKSDVYSFGVLLLELL 537
APE++ R K DV+SFG++L E++
Sbjct: 189 MAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 122/270 (45%), Gaps = 28/270 (10%)
Query: 354 LGKGSVGTSYKAVLEEGT-TVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYS 412
LG G G Y+ V ++ + TV VK LKE + EF + V+ +IKH N+V L
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 413 KDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGN 472
+ ++ ++M G+L L R R + + +A + + +L +H +
Sbjct: 79 EPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLE-KKNFIHRD 134
Query: 473 IKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVTFKSDVY 527
+ A N L+ +H V+DFGL+ L T + APE + K + KSDV+
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 194
Query: 528 SFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMV 586
+FGVLL E+ T G +P GID P V ++ + D + R E++
Sbjct: 195 AFGVLLWEIATYGMSPYP------GID-PSQVYELLEK-------DYRMERPEGCPEKVY 240
Query: 587 QLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
+L++ C P RP+ E+ + E M
Sbjct: 241 ELMR---ACWQWNPSDRPSFAEIHQAFETM 267
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 119/272 (43%), Gaps = 32/272 (11%)
Query: 354 LGKGSVGTSYKAVLEEGT-TVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYS 412
LG G G Y V ++ + TV VK LKE + EF + V+ +IKH N+V L
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTL 99
Query: 413 KDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGN 472
+ +V +YMP G+L L R R + + +A + + +L +H +
Sbjct: 100 EPPFYIVTEYMPYGNLLDYL---RECNREEVTAVVLLYMATQISSAMEYLE-KKNFIHRD 155
Query: 473 IKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVTFKSDVY 527
+ A N L+ +H V+DFGL+ L T + APE + + KSDV+
Sbjct: 156 LAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVW 215
Query: 528 SFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMV 586
+FGVLL E+ T G +P GIDL ++V+D+ Y + E
Sbjct: 216 AFGVLLWEIATYGMSPYP------GIDL-------------SQVYDLLEKGYRMEQPEGC 256
Query: 587 --QLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
++ ++ C P RP+ E + E M
Sbjct: 257 PPKVYELMRACWKWSPADRPSFAETHQAFETM 288
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 114/267 (42%), Gaps = 30/267 (11%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSK 413
+G G G + V +K ++E A+ + +F + EV+ K+ H +V L +
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 74
Query: 414 DEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNI 473
LV+++M G LS L RG + + + L G+A+L ++H ++
Sbjct: 75 APICLVFEFMEHGCLSDYLRTQRGLFAA----ETLLGMCLDVCEGMAYLE-EASVIHRDL 129
Query: 474 KASNILLRPDHDACVSDFG-----LNPLFGNTTPPTRVAGYRAPEVVETRKVTFKSDVYS 528
A N L+ + VSDFG L+ + ++T + +PEV + + KSDV+S
Sbjct: 130 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 189
Query: 529 FGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVEL-MRYHNIEEEMV 586
FGVL+ E+ + GK P + E ++ D+ R +
Sbjct: 190 FGVLMWEVFSEGKIPYENRSNSEVVE------------------DISTGFRLYKPRLAST 231
Query: 587 QLLQIAMGCVSTVPDQRPAMQEVVRMI 613
+ QI C P+ RPA ++R +
Sbjct: 232 HVYQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 115/270 (42%), Gaps = 30/270 (11%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSK 413
+G G G + V +K ++E A+ + +F + EV+ K+ H +V L +
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 74
Query: 414 DEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNI 473
LV+++M G LS L RG + + + L G+A+L ++H ++
Sbjct: 75 APICLVFEFMEHGCLSDYLRTQRGLFAA----ETLLGMCLDVCEGMAYLE-EACVIHRDL 129
Query: 474 KASNILLRPDHDACVSDFG-----LNPLFGNTTPPTRVAGYRAPEVVETRKVTFKSDVYS 528
A N L+ + VSDFG L+ + ++T + +PEV + + KSDV+S
Sbjct: 130 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 189
Query: 529 FGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVEL-MRYHNIEEEMV 586
FGVL+ E+ + GK P + E ++ D+ R +
Sbjct: 190 FGVLMWEVFSEGKIPYENRSNSEVVE------------------DISTGFRLYKPRLAST 231
Query: 587 QLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
+ QI C P+ RPA ++R + +
Sbjct: 232 HVYQIMNHCWKERPEDRPAFSRLLRQLAEI 261
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 115/270 (42%), Gaps = 30/270 (11%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSK 413
+G G G + V +K ++E A+ + +F + EV+ K+ H +V L +
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 77
Query: 414 DEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNI 473
LV+++M G LS L RG + + + L G+A+L ++H ++
Sbjct: 78 APICLVFEFMEHGCLSDYLRTQRGLFAA----ETLLGMCLDVCEGMAYLE-EACVIHRDL 132
Query: 474 KASNILLRPDHDACVSDFG-----LNPLFGNTTPPTRVAGYRAPEVVETRKVTFKSDVYS 528
A N L+ + VSDFG L+ + ++T + +PEV + + KSDV+S
Sbjct: 133 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 192
Query: 529 FGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVEL-MRYHNIEEEMV 586
FGVL+ E+ + GK P + E ++ D+ R +
Sbjct: 193 FGVLMWEVFSEGKIPYENRSNSEVVE------------------DISTGFRLYKPRLAST 234
Query: 587 QLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
+ QI C P+ RPA ++R + +
Sbjct: 235 HVYQIMNHCWRERPEDRPAFSRLLRQLAEI 264
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 148/315 (46%), Gaps = 39/315 (12%)
Query: 336 GGVYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVL 395
G ++ D +++ EV+G+G+ G KA V +K++ E ++ F +++ L
Sbjct: 1 GSLHMIDYKEI--EVEEVVGRGAFGVVCKAKWR-AKDVAIKQI-ESESERKAFIVELRQL 56
Query: 396 GKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDW---DNRMRIA 452
++ H N+V L + + LV +Y GSL +LHG+ PL + + M
Sbjct: 57 SRVNHPNIVKL--YGACLNPVCLVMEYAEGGSLYNVLHGAE-----PLPYYTAAHAMSWC 109
Query: 453 LSAARGLAHLHV--SGKIVHGNIKASNILLRPDHDAC-VSDFGLN-PLFGNTTPPTRVAG 508
L ++G+A+LH ++H ++K N+LL + DFG + + T A
Sbjct: 110 LQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAA 169
Query: 509 YRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTA 568
+ APEV E + K DV+S+G++L E++T + P +G + V + R
Sbjct: 170 WMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFD-EIGGPAFRIMWAVHNGTRP---- 224
Query: 569 EVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGETDDGLRQS 628
L++ N+ + + L+ C S P QRP+M+E+V+++ ++ R
Sbjct: 225 -----PLIK--NLPKPIESLMT---RCWSKDPSQRPSMEEIVKIMTHLMR------YFPG 268
Query: 629 SDDPSKGSDGHTPPP 643
+D+P + H+ PP
Sbjct: 269 ADEPLQYPCQHSLPP 283
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 115/270 (42%), Gaps = 30/270 (11%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSK 413
+G G G + V +K ++E A+ + +F + EV+ K+ H +V L +
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 72
Query: 414 DEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNI 473
LV+++M G LS L RG + + + L G+A+L ++H ++
Sbjct: 73 APICLVFEFMEHGCLSDYLRTQRGLFAA----ETLLGMCLDVCEGMAYLE-EACVIHRDL 127
Query: 474 KASNILLRPDHDACVSDFG-----LNPLFGNTTPPTRVAGYRAPEVVETRKVTFKSDVYS 528
A N L+ + VSDFG L+ + ++T + +PEV + + KSDV+S
Sbjct: 128 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 187
Query: 529 FGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVEL-MRYHNIEEEMV 586
FGVL+ E+ + GK P + E ++ D+ R +
Sbjct: 188 FGVLMWEVFSEGKIPYENRSNSEVVE------------------DISTGFRLYKPRLAST 229
Query: 587 QLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
+ QI C P+ RPA ++R + +
Sbjct: 230 HVYQIMNHCWKERPEDRPAFSRLLRQLAEI 259
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 99/198 (50%), Gaps = 17/198 (8%)
Query: 352 EVLGKGSVGT----SYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLR 407
+ +GKG G Y+ G V VK +K A + F + V+ +++H N+V L
Sbjct: 27 QTIGKGEFGDVMLGDYR-----GNKVAVKCIKNDATAQ-AFLAEASVMTQLRHSNLVQLL 80
Query: 408 AFYYSKDEKL-LVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSG 466
+ L +V +YM GSL L R GR+ L D ++ +L + +L
Sbjct: 81 GVIVEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYLE-GN 136
Query: 467 KIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRV-AGYRAPEVVETRKVTFKSD 525
VH ++ A N+L+ D+ A VSDFGL +T ++ + APE + +K + KSD
Sbjct: 137 NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSD 196
Query: 526 VYSFGVLLLELLT-GKAP 542
V+SFG+LL E+ + G+ P
Sbjct: 197 VWSFGILLWEIYSFGRVP 214
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 97/195 (49%), Gaps = 9/195 (4%)
Query: 352 EVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYY 411
E LG+GS G+ YKA+ +E +V + V +E ++ ++ + +VV Y+
Sbjct: 35 EKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYF 94
Query: 412 SKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHG 471
+ +V +Y AGS+S ++ R +T L D I S +GL +LH KI H
Sbjct: 95 KNTDLWIVMEYCGAGSVSDII---RLRNKT-LTEDEIATILQSTLKGLEYLHFMRKI-HR 149
Query: 472 NIKASNILLRPDHDACVSDFGL-NPLFGNTTPPTRVAG---YRAPEVVETRKVTFKSDVY 527
+IKA NILL + A ++DFG+ L V G + APEV++ +D++
Sbjct: 150 DIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIW 209
Query: 528 SFGVLLLELLTGKAP 542
S G+ +E+ GK P
Sbjct: 210 SLGITAIEMAEGKPP 224
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 97/200 (48%), Gaps = 20/200 (10%)
Query: 354 LGKGSVGT----SYKAVLEE-GTTVVVKRLKEVAVGK-REFEMQMEVLGKIKHDNVVPLR 407
LGKG+ G+ Y + + G V VK+L+ R+FE ++E+L ++HDN+V +
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 408 AFYYSKDEK--LLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
YS + L+ +Y+P GSL L + +D ++ +G+ +L +
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQICKGMEYLG-T 133
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-------YRAPEVVETR 518
+ +H N+ NIL+ ++ + DFGL + +V + APE +
Sbjct: 134 KRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTES 193
Query: 519 KVTFKSDVYSFGVLLLELLT 538
K + SDV+SFGV+L EL T
Sbjct: 194 KFSVASDVWSFGVVLYELFT 213
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 141/299 (47%), Gaps = 37/299 (12%)
Query: 352 EVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYY 411
EV+G+G+ G KA V +K++ E ++ F +++ L ++ H N+V L +
Sbjct: 14 EVVGRGAFGVVCKAKWR-AKDVAIKQI-ESESERKAFIVELRQLSRVNHPNIVKL--YGA 69
Query: 412 SKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDW---DNRMRIALSAARGLAHLHV--SG 466
+ LV +Y GSL +LHG+ PL + + M L ++G+A+LH
Sbjct: 70 CLNPVCLVMEYAEGGSLYNVLHGAE-----PLPYYTAAHAMSWCLQCSQGVAYLHSMQPK 124
Query: 467 KIVHGNIKASNILLRPDHDAC-VSDFGLN-PLFGNTTPPTRVAGYRAPEVVETRKVTFKS 524
++H ++K N+LL + DFG + + T A + APEV E + K
Sbjct: 125 ALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKC 184
Query: 525 DVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEE 584
DV+S+G++L E++T + P +G + V + R L++ N+ +
Sbjct: 185 DVFSWGIILWEVITRRKPFD-EIGGPAFRIMWAVHNGTRP---------PLIK--NLPKP 232
Query: 585 MVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGETDDGLRQSSDDPSKGSDGHTPPP 643
+ L+ C S P QRP+M+E+V+++ ++ R +D+P + H+ PP
Sbjct: 233 IESLMT---RCWSKDPSQRPSMEEIVKIMTHLMR------YFPGADEPLQYPCQHSLPP 282
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 99/198 (50%), Gaps = 17/198 (8%)
Query: 352 EVLGKGSVGT----SYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLR 407
+ +GKG G Y+ G V VK +K A + F + V+ +++H N+V L
Sbjct: 12 QTIGKGEFGDVMLGDYR-----GNKVAVKCIKNDATAQ-AFLAEASVMTQLRHSNLVQLL 65
Query: 408 AFYYSKDEKL-LVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSG 466
+ L +V +YM GSL L R GR+ L D ++ +L + +L
Sbjct: 66 GVIVEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYLE-GN 121
Query: 467 KIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRV-AGYRAPEVVETRKVTFKSD 525
VH ++ A N+L+ D+ A VSDFGL +T ++ + APE + +K + KSD
Sbjct: 122 NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSD 181
Query: 526 VYSFGVLLLELLT-GKAP 542
V+SFG+LL E+ + G+ P
Sbjct: 182 VWSFGILLWEIYSFGRVP 199
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 109/217 (50%), Gaps = 20/217 (9%)
Query: 333 FFEGGVYSFDLEDLLRASAEVLGKGSVGT----SYKAVLEEGTTVVVKRLKEVAVGKREF 388
F+ G ++ ++++L + +GKG G Y+ G V VK +K A + F
Sbjct: 183 FYRSG-WALNMKEL--KLLQTIGKGEFGDVMLGDYR-----GNKVAVKCIKNDATAQ-AF 233
Query: 389 EMQMEVLGKIKHDNVVPLRAFYYSKDEKL-LVYDYMPAGSLSALLHGSRGSGRTPLDWDN 447
+ V+ +++H N+V L + L +V +YM GSL L R GR+ L D
Sbjct: 234 LAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDC 290
Query: 448 RMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRV- 506
++ +L + +L VH ++ A N+L+ D+ A VSDFGL +T ++
Sbjct: 291 LLKFSLDVCEAMEYLE-GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP 349
Query: 507 AGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAP 542
+ APE + +K + KSDV+SFG+LL E+ + G+ P
Sbjct: 350 VKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 386
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 104/222 (46%), Gaps = 26/222 (11%)
Query: 338 VYSFDLEDLLRASAEVLGKGSVGTSYKAVL----EEGTTVVVKRLKEVAVGKREFE---M 390
+Y +E +R + +G+GS G KA+L E+G V+K + + +E E
Sbjct: 18 LYFQSMEKYVRL--QKIGEGSFG---KAILVKSTEDGRQYVIKEINISRMSSKEREESRR 72
Query: 391 QMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRG---SGRTPLDWDN 447
++ VL +KH N+V R + +V DY G L ++ +G LDW
Sbjct: 73 EVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFV 132
Query: 448 RMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVA 507
++ +AL H+H KI+H +IK+ NI L D + DFG+ + +T R
Sbjct: 133 QICLALK------HVH-DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARAC 185
Query: 508 ----GYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQA 545
Y +PE+ E + KSD+++ G +L EL T K +A
Sbjct: 186 IGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEA 227
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 115/270 (42%), Gaps = 30/270 (11%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSK 413
+G G G + V +K +KE ++ + +F + EV+ K+ H +V L +
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQ 94
Query: 414 DEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNI 473
LV+++M G LS L RG + + + L G+A+L ++H ++
Sbjct: 95 APICLVFEFMEHGCLSDYLRTQRGLFAA----ETLLGMCLDVCEGMAYLE-EACVIHRDL 149
Query: 474 KASNILLRPDHDACVSDFG-----LNPLFGNTTPPTRVAGYRAPEVVETRKVTFKSDVYS 528
A N L+ + VSDFG L+ + ++T + +PEV + + KSDV+S
Sbjct: 150 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 209
Query: 529 FGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVEL-MRYHNIEEEMV 586
FGVL+ E+ + GK P + E ++ D+ R +
Sbjct: 210 FGVLMWEVFSEGKIPYENRSNSEVVE------------------DISTGFRLYKPRLAST 251
Query: 587 QLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
+ QI C P+ RPA ++R + +
Sbjct: 252 HVYQIMNHCWKERPEDRPAFSRLLRQLAEI 281
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 98/202 (48%), Gaps = 24/202 (11%)
Query: 354 LGKGSVGT----SYKAVLEE-GTTVVVKRLKEVAVGK-REFEMQMEVLGKIKHDNVVPLR 407
LGKG+ G+ Y + + G V VK+L+ R+FE ++E+L ++HDN+V +
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 408 AFYYSKDEK--LLVYDYMPAGSLSALL--HGSRGSGRTPLDWDNRMRIALSAARGLAHLH 463
YS + L+ +Y+P GSL L H R +D ++ +G+ +L
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAER------IDHIKLLQYTSQICKGMEYLG 134
Query: 464 VSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-------YRAPEVVE 516
+ + +H ++ NIL+ ++ + DFGL + +V + APE +
Sbjct: 135 -TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 517 TRKVTFKSDVYSFGVLLLELLT 538
K + SDV+SFGV+L EL T
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT 215
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 20/200 (10%)
Query: 354 LGKGSVGT----SYKAVLEE-GTTVVVKRLKEVAVGK-REFEMQMEVLGKIKHDNVVPLR 407
LGKG+ G+ Y + + G V VK+L+ R+FE ++E+L ++HDN+V +
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 408 AFYYSKDEK--LLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
YS + L+ +Y+P GSL L + +D ++ +G+ +L +
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQICKGMEYLG-T 163
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-------YRAPEVVETR 518
+ +H ++ NIL+ ++ + DFGL + +V + APE +
Sbjct: 164 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 223
Query: 519 KVTFKSDVYSFGVLLLELLT 538
K + SDV+SFGV+L EL T
Sbjct: 224 KFSVASDVWSFGVVLYELFT 243
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 20/200 (10%)
Query: 354 LGKGSVGT----SYKAVLEE-GTTVVVKRLKEVAVGK-REFEMQMEVLGKIKHDNVVPLR 407
LGKG+ G+ Y + + G V VK+L+ R+FE ++E+L ++HDN+V +
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 408 AFYYSKDEK--LLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
YS + L+ +Y+P GSL L + +D ++ +G+ +L +
Sbjct: 83 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQICKGMEYLG-T 137
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-------YRAPEVVETR 518
+ +H ++ NIL+ ++ + DFGL + +V + APE +
Sbjct: 138 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 197
Query: 519 KVTFKSDVYSFGVLLLELLT 538
K + SDV+SFGV+L EL T
Sbjct: 198 KFSVASDVWSFGVVLYELFT 217
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 20/200 (10%)
Query: 354 LGKGSVGT----SYKAVLEE-GTTVVVKRLKEVAVGK-REFEMQMEVLGKIKHDNVVPLR 407
LGKG+ G+ Y + + G V VK+L+ R+FE ++E+L ++HDN+V +
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 408 AFYYSKDEK--LLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
YS + L+ +Y+P GSL L + +D ++ +G+ +L +
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQICKGMEYLG-T 139
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-------YRAPEVVETR 518
+ +H ++ NIL+ ++ + DFGL + +V + APE +
Sbjct: 140 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 199
Query: 519 KVTFKSDVYSFGVLLLELLT 538
K + SDV+SFGV+L EL T
Sbjct: 200 KFSVASDVWSFGVVLYELFT 219
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 20/200 (10%)
Query: 354 LGKGSVGT----SYKAVLEE-GTTVVVKRLKEVAVGK-REFEMQMEVLGKIKHDNVVPLR 407
LGKG+ G+ Y + + G V VK+L+ R+FE ++E+L ++HDN+V +
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 408 AFYYSKDEK--LLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
YS + L+ +Y+P GSL L + +D ++ +G+ +L +
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQICKGMEYLG-T 135
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-------YRAPEVVETR 518
+ +H ++ NIL+ ++ + DFGL + +V + APE +
Sbjct: 136 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 195
Query: 519 KVTFKSDVYSFGVLLLELLT 538
K + SDV+SFGV+L EL T
Sbjct: 196 KFSVASDVWSFGVVLYELFT 215
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 104/220 (47%), Gaps = 20/220 (9%)
Query: 345 DLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVV 404
++ + +V+G GS G ++A L E V +K+ V KR +++++ +KH NVV
Sbjct: 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKK---VLQDKRFKNRELQIMRIVKHPNVV 95
Query: 405 PLRAFYYS----KDEKL--LVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARG 458
L+AF+YS KDE LV +Y+P A H ++ P+ L R
Sbjct: 96 DLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQL--LRS 153
Query: 459 LAHLHVSGKIVHGNIKASNILLRPDHDAC-VSDFGLNPLFGNTTPPTRVAG---YRAPEV 514
LA++H G I H +IK N+LL P + DFG + P YRAPE+
Sbjct: 154 LAYIHSIG-ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRYYRAPEL 212
Query: 515 V-ETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGID 553
+ T D++S G ++ EL+ G+ GE GID
Sbjct: 213 IFGATNYTTNIDIWSTGCVMAELMQGQP---LFPGESGID 249
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 97/200 (48%), Gaps = 20/200 (10%)
Query: 354 LGKGSVGT----SYKAVLEE-GTTVVVKRLKEVAVGK-REFEMQMEVLGKIKHDNVVPLR 407
LGKG+ G+ Y + + G V VK+L+ R+FE ++E+L ++HDN+V +
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 408 AFYYSKDEK--LLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
YS + L+ +Y+P GSL L + +D ++ +G+ +L +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQICKGMEYLG-T 132
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPL-------FGNTTPPTRVAGYRAPEVVETR 518
+ +H ++ NIL+ ++ + DFGL + F P + APE +
Sbjct: 133 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTES 192
Query: 519 KVTFKSDVYSFGVLLLELLT 538
K + SDV+SFGV+L EL T
Sbjct: 193 KFSVASDVWSFGVVLYELFT 212
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 20/200 (10%)
Query: 354 LGKGSVGT----SYKAVLEE-GTTVVVKRLKEVAVGK-REFEMQMEVLGKIKHDNVVPLR 407
LGKG+ G+ Y + + G V VK+L+ R+FE ++E+L ++HDN+V +
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 408 AFYYSKDEK--LLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
YS + L+ +Y+P GSL L + +D ++ +G+ +L +
Sbjct: 84 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQICKGMEYLG-T 138
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-------YRAPEVVETR 518
+ +H ++ NIL+ ++ + DFGL + +V + APE +
Sbjct: 139 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 198
Query: 519 KVTFKSDVYSFGVLLLELLT 538
K + SDV+SFGV+L EL T
Sbjct: 199 KFSVASDVWSFGVVLYELFT 218
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 20/200 (10%)
Query: 354 LGKGSVGT----SYKAVLEE-GTTVVVKRLKEVAVGK-REFEMQMEVLGKIKHDNVVPLR 407
LGKG+ G+ Y + + G V VK+L+ R+FE ++E+L ++HDN+V +
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 408 AFYYSKDEK--LLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
YS + L+ +Y+P GSL L + +D ++ +G+ +L +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQICKGMEYLG-T 132
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-------YRAPEVVETR 518
+ +H ++ NIL+ ++ + DFGL + +V + APE +
Sbjct: 133 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 192
Query: 519 KVTFKSDVYSFGVLLLELLT 538
K + SDV+SFGV+L EL T
Sbjct: 193 KFSVASDVWSFGVVLYELFT 212
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 20/200 (10%)
Query: 354 LGKGSVGT----SYKAVLEE-GTTVVVKRLKEVAVGK-REFEMQMEVLGKIKHDNVVPLR 407
LGKG+ G+ Y + + G V VK+L+ R+FE ++E+L ++HDN+V +
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 408 AFYYSKDEK--LLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
YS + L+ +Y+P GSL L + +D ++ +G+ +L +
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQICKGMEYLG-T 131
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-------YRAPEVVETR 518
+ +H ++ NIL+ ++ + DFGL + +V + APE +
Sbjct: 132 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 191
Query: 519 KVTFKSDVYSFGVLLLELLT 538
K + SDV+SFGV+L EL T
Sbjct: 192 KFSVASDVWSFGVVLYELFT 211
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 20/200 (10%)
Query: 354 LGKGSVGT----SYKAVLEE-GTTVVVKRLKEVAVGK-REFEMQMEVLGKIKHDNVVPLR 407
LGKG+ G+ Y + + G V VK+L+ R+FE ++E+L ++HDN+V +
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 408 AFYYSKDEK--LLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
YS + L+ +Y+P GSL L + +D ++ +G+ +L +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQICKGMEYLG-T 132
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-------YRAPEVVETR 518
+ +H ++ NIL+ ++ + DFGL + +V + APE +
Sbjct: 133 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 192
Query: 519 KVTFKSDVYSFGVLLLELLT 538
K + SDV+SFGV+L EL T
Sbjct: 193 KFSVASDVWSFGVVLYELFT 212
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 20/200 (10%)
Query: 354 LGKGSVGT----SYKAVLEE-GTTVVVKRLKEVAVGK-REFEMQMEVLGKIKHDNVVPLR 407
LGKG+ G+ Y + + G V VK+L+ R+FE ++E+L ++HDN+V +
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 408 AFYYSKDEK--LLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
YS + L+ +Y+P GSL L + +D ++ +G+ +L +
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQICKGMEYLG-T 130
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-------YRAPEVVETR 518
+ +H ++ NIL+ ++ + DFGL + +V + APE +
Sbjct: 131 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 190
Query: 519 KVTFKSDVYSFGVLLLELLT 538
K + SDV+SFGV+L EL T
Sbjct: 191 KFSVASDVWSFGVVLYELFT 210
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 20/200 (10%)
Query: 354 LGKGSVGT----SYKAVLEE-GTTVVVKRLKEVAVGK-REFEMQMEVLGKIKHDNVVPLR 407
LGKG+ G+ Y + + G V VK+L+ R+FE ++E+L ++HDN+V +
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 408 AFYYSKDEK--LLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
YS + L+ +Y+P GSL L + +D ++ +G+ +L +
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQICKGMEYLG-T 136
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-------YRAPEVVETR 518
+ +H ++ NIL+ ++ + DFGL + +V + APE +
Sbjct: 137 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 196
Query: 519 KVTFKSDVYSFGVLLLELLT 538
K + SDV+SFGV+L EL T
Sbjct: 197 KFSVASDVWSFGVVLYELFT 216
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 20/200 (10%)
Query: 354 LGKGSVGT----SYKAVLEE-GTTVVVKRLKEVAVGK-REFEMQMEVLGKIKHDNVVPLR 407
LGKG+ G+ Y + + G V VK+L+ R+FE ++E+L ++HDN+V +
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 408 AFYYSKDEK--LLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
YS + L+ +Y+P GSL L + +D ++ +G+ +L +
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQICKGMEYLG-T 150
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-------YRAPEVVETR 518
+ +H ++ NIL+ ++ + DFGL + +V + APE +
Sbjct: 151 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 210
Query: 519 KVTFKSDVYSFGVLLLELLT 538
K + SDV+SFGV+L EL T
Sbjct: 211 KFSVASDVWSFGVVLYELFT 230
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 20/200 (10%)
Query: 354 LGKGSVGT----SYKAVLEE-GTTVVVKRLKEVAVGK-REFEMQMEVLGKIKHDNVVPLR 407
LGKG+ G+ Y + + G V VK+L+ R+FE ++E+L ++HDN+V +
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 408 AFYYSKDEK--LLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
YS + L+ +Y+P GSL L + +D ++ +G+ +L +
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER----IDHIKLLQYTSQICKGMEYLG-T 150
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-------YRAPEVVETR 518
+ +H ++ NIL+ ++ + DFGL + +V + APE +
Sbjct: 151 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 210
Query: 519 KVTFKSDVYSFGVLLLELLT 538
K + SDV+SFGV+L EL T
Sbjct: 211 KFSVASDVWSFGVVLYELFT 230
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 114/270 (42%), Gaps = 30/270 (11%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSK 413
+G G G + V +K ++E A+ + +F + EV+ K+ H +V L +
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 75
Query: 414 DEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNI 473
LV ++M G LS L RG + + + L G+A+L ++H ++
Sbjct: 76 APICLVTEFMEHGCLSDYLRTQRGLFAA----ETLLGMCLDVCEGMAYLE-EACVIHRDL 130
Query: 474 KASNILLRPDHDACVSDFG-----LNPLFGNTTPPTRVAGYRAPEVVETRKVTFKSDVYS 528
A N L+ + VSDFG L+ + ++T + +PEV + + KSDV+S
Sbjct: 131 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 190
Query: 529 FGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVEL-MRYHNIEEEMV 586
FGVL+ E+ + GK P + E ++ D+ R +
Sbjct: 191 FGVLMWEVFSEGKIPYENRSNSEVVE------------------DISTGFRLYKPRLAST 232
Query: 587 QLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
+ QI C P+ RPA ++R + +
Sbjct: 233 HVYQIMNHCWRERPEDRPAFSRLLRQLAEI 262
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 103/201 (51%), Gaps = 20/201 (9%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKRE---FEMQMEVLGKIKHDNVVPLRAFY 410
+G GS GT YK + V VK L A ++ F+ ++ VL K +H N++ L Y
Sbjct: 21 IGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGY 77
Query: 411 YSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVH 470
+K + +V + SL LH T + + IA A+G+ +LH I+H
Sbjct: 78 STKPQLAIVTQWCEGSSLYHHLHIIE----TKFEMIKLIDIARQTAQGMDYLHAKS-IIH 132
Query: 471 GNIKASNILLRPDHDACVSDFGLNPL---FGNTTPPTRVAG---YRAPEVVETRK---VT 521
++K++NI L D + DFGL + + + +++G + APEV+ + +
Sbjct: 133 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 192
Query: 522 FKSDVYSFGVLLLELLTGKAP 542
F+SDVY+FG++L EL+TG+ P
Sbjct: 193 FQSDVYAFGIVLYELMTGQLP 213
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 32/207 (15%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKRE---FEMQMEVLGKIKHDNVVPLRAFY 410
+G GS GT YK + V VK L A ++ F+ ++ VL K +H N++ L Y
Sbjct: 16 IGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGY 72
Query: 411 YSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVH 470
+K + +V + SL LH T + + IA A+G+ +LH I+H
Sbjct: 73 STKPQLAIVTQWCEGSSLYHHLHIIE----TKFEMIKLIDIARQTAQGMDYLHAKS-IIH 127
Query: 471 GNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG------------YRAPEVVETR 518
++K++NI L D + DFGL T +R +G + APEV+ +
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGL------ATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 181
Query: 519 K---VTFKSDVYSFGVLLLELLTGKAP 542
+F+SDVY+FG++L EL+TG+ P
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 103/201 (51%), Gaps = 20/201 (9%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKRE---FEMQMEVLGKIKHDNVVPLRAFY 410
+G GS GT YK + V VK L A ++ F+ ++ VL K +H N++ L Y
Sbjct: 21 IGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGY 77
Query: 411 YSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVH 470
+K + +V + SL LH T + + IA A+G+ +LH I+H
Sbjct: 78 STKPQLAIVTQWCEGSSLYHHLHIIE----TKFEMIKLIDIARQTAQGMDYLHAKS-IIH 132
Query: 471 GNIKASNILLRPDHDACVSDFGLNPL---FGNTTPPTRVAG---YRAPEVVETRK---VT 521
++K++NI L D + DFGL + + + +++G + APEV+ + +
Sbjct: 133 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 192
Query: 522 FKSDVYSFGVLLLELLTGKAP 542
F+SDVY+FG++L EL+TG+ P
Sbjct: 193 FQSDVYAFGIVLYELMTGQLP 213
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 92/195 (47%), Gaps = 10/195 (5%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSK 413
LG G G + T V VK LK + + F + ++ ++HD +V L A +
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTRE 80
Query: 414 DEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNI 473
+ ++ +YM GSL L G G+ L + + A G+A++ I H ++
Sbjct: 81 EPIYIITEYMAKGSLLDFLKSDEG-GKVLL--PKLIDFSAQIAEGMAYIERKNYI-HRDL 136
Query: 474 KASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVTFKSDVYS 528
+A+N+L+ ++DFGL + + R + APE + T KSDV+S
Sbjct: 137 RAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWS 196
Query: 529 FGVLLLELLT-GKAP 542
FG+LL E++T GK P
Sbjct: 197 FGILLYEIVTYGKIP 211
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 103/201 (51%), Gaps = 20/201 (9%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKRE---FEMQMEVLGKIKHDNVVPLRAFY 410
+G GS GT YK + V VK L A ++ F+ ++ VL K +H N++ L Y
Sbjct: 16 IGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGY 72
Query: 411 YSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVH 470
+K + +V + SL LH T + + IA A+G+ +LH I+H
Sbjct: 73 STKPQLAIVTQWCEGSSLYHHLHIIE----TKFEMIKLIDIARQTAQGMDYLHAKS-IIH 127
Query: 471 GNIKASNILLRPDHDACVSDFGLNPL---FGNTTPPTRVAG---YRAPEVVETRK---VT 521
++K++NI L D + DFGL + + + +++G + APEV+ + +
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 187
Query: 522 FKSDVYSFGVLLLELLTGKAP 542
F+SDVY+FG++L EL+TG+ P
Sbjct: 188 FQSDVYAFGIVLYELMTGQLP 208
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 32/207 (15%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKRE---FEMQMEVLGKIKHDNVVPLRAFY 410
+G GS GT YK + V VK L A ++ F+ ++ VL K +H N++ L Y
Sbjct: 36 IGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGY 92
Query: 411 YSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVH 470
+K + +V + SL LH T + + IA A+G+ +LH I+H
Sbjct: 93 STKPQLAIVTQWCEGSSLYHHLHIIE----TKFEMIKLIDIARQTAQGMDYLHAKS-IIH 147
Query: 471 GNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG------------YRAPEVVETR 518
++K++NI L D + DFGL T +R +G + APEV+ +
Sbjct: 148 RDLKSNNIFLHEDLTVKIGDFGL------ATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 201
Query: 519 K---VTFKSDVYSFGVLLLELLTGKAP 542
+F+SDVY+FG++L EL+TG+ P
Sbjct: 202 DKNPYSFQSDVYAFGIVLYELMTGQLP 228
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 32/207 (15%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKRE---FEMQMEVLGKIKHDNVVPLRAFY 410
+G GS GT YK + V VK L A ++ F+ ++ VL K +H N++ L Y
Sbjct: 44 IGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGY 100
Query: 411 YSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVH 470
+K + +V + SL LH T + + IA A+G+ +LH I+H
Sbjct: 101 STKPQLAIVTQWCEGSSLYHHLHIIE----TKFEMIKLIDIARQTAQGMDYLHAKS-IIH 155
Query: 471 GNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG------------YRAPEVVETR 518
++K++NI L D + DFGL T +R +G + APEV+ +
Sbjct: 156 RDLKSNNIFLHEDLTVKIGDFGL------ATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 209
Query: 519 K---VTFKSDVYSFGVLLLELLTGKAP 542
+F+SDVY+FG++L EL+TG+ P
Sbjct: 210 DKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 103/201 (51%), Gaps = 20/201 (9%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKRE---FEMQMEVLGKIKHDNVVPLRAFY 410
+G GS GT YK + V VK L A ++ F+ ++ VL K +H N++ L Y
Sbjct: 18 IGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGY 74
Query: 411 YSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVH 470
+K + +V + SL LH T + + IA A+G+ +LH I+H
Sbjct: 75 STKPQLAIVTQWCEGSSLYHHLHIIE----TKFEMIKLIDIARQTAQGMDYLHAKS-IIH 129
Query: 471 GNIKASNILLRPDHDACVSDFGLNPL---FGNTTPPTRVAG---YRAPEVVETRK---VT 521
++K++NI L D + DFGL + + + +++G + APEV+ + +
Sbjct: 130 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 189
Query: 522 FKSDVYSFGVLLLELLTGKAP 542
F+SDVY+FG++L EL+TG+ P
Sbjct: 190 FQSDVYAFGIVLYELMTGQLP 210
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 103/201 (51%), Gaps = 20/201 (9%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKRE---FEMQMEVLGKIKHDNVVPLRAFY 410
+G GS GT YK + V VK L A ++ F+ ++ VL K +H N++ L Y
Sbjct: 43 IGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGY 99
Query: 411 YSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVH 470
+K + +V + SL LH T + + IA A+G+ +LH I+H
Sbjct: 100 STKPQLAIVTQWCEGSSLYHHLHIIE----TKFEMIKLIDIARQTAQGMDYLHAKS-IIH 154
Query: 471 GNIKASNILLRPDHDACVSDFGLNPL---FGNTTPPTRVAG---YRAPEVVETRK---VT 521
++K++NI L D + DFGL + + + +++G + APEV+ + +
Sbjct: 155 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 214
Query: 522 FKSDVYSFGVLLLELLTGKAP 542
F+SDVY+FG++L EL+TG+ P
Sbjct: 215 FQSDVYAFGIVLYELMTGQLP 235
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 97/200 (48%), Gaps = 20/200 (10%)
Query: 354 LGKGSVGT----SYKAVLEE-GTTVVVKRLKEVAVGK-REFEMQMEVLGKIKHDNVVPLR 407
LGKG+ G+ Y + + G V VK+L+ R+FE ++E+L ++HDN+V +
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 408 AFYYSKDEK--LLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
YS + L+ +++P GSL L + +D ++ +G+ +L +
Sbjct: 81 GVCYSAGRRNLKLIMEFLPYGSLREYLQKHKER----IDHIKLLQYTSQICKGMEYLG-T 135
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-------YRAPEVVETR 518
+ +H ++ NIL+ ++ + DFGL + +V + APE +
Sbjct: 136 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 195
Query: 519 KVTFKSDVYSFGVLLLELLT 538
K + SDV+SFGV+L EL T
Sbjct: 196 KFSVASDVWSFGVVLYELFT 215
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 103/201 (51%), Gaps = 20/201 (9%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKRE---FEMQMEVLGKIKHDNVVPLRAFY 410
+G GS GT YK + V VK L A ++ F+ ++ VL K +H N++ L Y
Sbjct: 44 IGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGY 100
Query: 411 YSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVH 470
+K + +V + SL LH T + + IA A+G+ +LH I+H
Sbjct: 101 STKPQLAIVTQWCEGSSLYHHLHIIE----TKFEMIKLIDIARQTAQGMDYLHAKS-IIH 155
Query: 471 GNIKASNILLRPDHDACVSDFGLNPL---FGNTTPPTRVAG---YRAPEVVETRK---VT 521
++K++NI L D + DFGL + + + +++G + APEV+ + +
Sbjct: 156 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 215
Query: 522 FKSDVYSFGVLLLELLTGKAP 542
F+SDVY+FG++L EL+TG+ P
Sbjct: 216 FQSDVYAFGIVLYELMTGQLP 236
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 98/195 (50%), Gaps = 13/195 (6%)
Query: 354 LGKGSVGTSYKAVLEE-GTTVVVKRLKEVAVGKREFEM-QMEVLGKIKHDNVVPLRAFYY 411
+G+GS G A + G V VK++ +RE ++ ++ HDNVV + + Y
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 412 SKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHG 471
DE +V +++ G+L+ ++ +R ++ + + LS R L++LH G ++H
Sbjct: 113 VGDELWVVMEFLEGGALTDIVTHTR------MNEEQIATVCLSVLRALSYLHNQG-VIHR 165
Query: 472 NIKASNILLRPDHDACVSDFGLNPLFGNTTPPTR----VAGYRAPEVVETRKVTFKSDVY 527
+IK+ +ILL D +SDFG P + + APEV+ + D++
Sbjct: 166 DIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIW 225
Query: 528 SFGVLLLELLTGKAP 542
S G++++E++ G+ P
Sbjct: 226 SLGIMVIEMIDGEPP 240
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 128/291 (43%), Gaps = 46/291 (15%)
Query: 354 LGKGSVGTSYKAVL------EEGTTVVVKRLKEVAV-GKREFEMQMEVLGKIKHDNVVPL 406
LG+G+ G + A ++ V VK LK+ + +++F + E+L ++H+++V
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 407 RAFYYSKDEKLLVYDYMPAGSLSALL--HG------SRGSGRTPLDWDNRMRIALSAARG 458
D ++V++YM G L+ L HG + G+ T L + IA A G
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 459 LAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLN---------PLFGNTTPPTRVAGY 509
+ +L S VH ++ N L+ + + DFG++ + G+T P R +
Sbjct: 141 MVYL-ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIR---W 196
Query: 510 RAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTA 568
PE + RK T +SDV+S GV+L E+ T GK P W Q E
Sbjct: 197 MPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP--------------WYQLSNNEVIEC 242
Query: 569 EVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRG 619
L R +E+ +L+ +GC P R ++ + +++N+ +
Sbjct: 243 ITQGRVLQRPRTCPQEVYELM---LGCWQREPHMRKNIKGIHTLLQNLAKA 290
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 97/198 (48%), Gaps = 17/198 (8%)
Query: 352 EVLGKGSVGT----SYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLR 407
+ +GKG G Y+ G V VK +K A + F + V+ +++H N+V L
Sbjct: 18 QTIGKGEFGDVMLGDYR-----GNKVAVKCIKNDATAQ-AFLAEASVMTQLRHSNLVQLL 71
Query: 408 AFYYSKDEKL-LVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSG 466
+ L +V +YM GSL L R GR+ L D ++ +L + +L
Sbjct: 72 GVIVEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYLE-GN 127
Query: 467 KIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRV-AGYRAPEVVETRKVTFKSD 525
VH ++ A N+L+ D+ A VSDFGL +T ++ + APE + + KSD
Sbjct: 128 NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREAAFSTKSD 187
Query: 526 VYSFGVLLLELLT-GKAP 542
V+SFG+LL E+ + G+ P
Sbjct: 188 VWSFGILLWEIYSFGRVP 205
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 119/265 (44%), Gaps = 33/265 (12%)
Query: 354 LGKGSVGTSYKAVLEE-----GTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRA 408
LGKG G Y A ++ V+ K E A + + ++E+ ++H N++ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 409 FYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKI 468
+++ L+ +Y P G++ L + D A L++ H S ++
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCH-SKRV 129
Query: 469 VHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG---YRAPEVVETRKVTFKSD 525
+H +IK N+LL + ++DFG + + ++ T + G Y PE++E R K D
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTELCGTLDYLPPEMIEGRMHDEKVD 188
Query: 526 VYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEM 585
++S GVL E L GK P +A+ +E + + R E+T F E R ++
Sbjct: 189 LWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR------DL 236
Query: 586 VQLLQIAMGCVSTVPDQRPAMQEVV 610
+ L + P QRP ++EV+
Sbjct: 237 ISRL------LKHNPSQRPMLREVL 255
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 126/297 (42%), Gaps = 55/297 (18%)
Query: 354 LGKGSVGTSYKAVL------EEGTTVVVKRLKEVAVGKR-EFEMQMEVLGKIKHDNVVPL 406
LG+G+ G + A ++ V VK LK+ + R +F+ + E+L ++H+++V
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 407 RAFYYSKDEKLLVYDYMPAGSLSALLH-----------GSRGSGRTPLDWDNRMRIALSA 455
D ++V++YM G L+ L G + L + IA
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 456 ARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNP---------LFGNTTPPTRV 506
A G+ +L S VH ++ N L+ + + DFG++ + G+T P R
Sbjct: 143 ASGMVYL-ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIR- 200
Query: 507 AGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREE 565
+ PE + RK T +SDV+SFGV+L E+ T GK P E I+ Q V E
Sbjct: 201 --WMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECI--TQGRVLER 256
Query: 566 ---WTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRG 619
EV+DV L GC P QR ++E+ +++ + +
Sbjct: 257 PRVCPKEVYDVML------------------GCWQREPQQRLNIKEIYKILHALGKA 295
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 102/201 (50%), Gaps = 20/201 (9%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKRE---FEMQMEVLGKIKHDNVVPLRAFY 410
+G GS GT YK + V VK L A ++ F+ ++ VL K +H N++ L Y
Sbjct: 16 IGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGY 72
Query: 411 YSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVH 470
+ + +V + SL LH T + + IA A+G+ +LH I+H
Sbjct: 73 STAPQLAIVTQWCEGSSLYHHLHIIE----TKFEMIKLIDIARQTAQGMDYLHAKS-IIH 127
Query: 471 GNIKASNILLRPDHDACVSDFGLNPL---FGNTTPPTRVAG---YRAPEVVETRK---VT 521
++K++NI L D + DFGL + + + +++G + APEV+ + +
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 187
Query: 522 FKSDVYSFGVLLLELLTGKAP 542
F+SDVY+FG++L EL+TG+ P
Sbjct: 188 FQSDVYAFGIVLYELMTGQLP 208
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 109/244 (44%), Gaps = 23/244 (9%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSK 413
LG G G + T V VK LK + + F + ++ ++HD +V L A +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKE 79
Query: 414 DEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNI 473
+ ++ ++M GSL L G G+ L + + A G+A++ I H ++
Sbjct: 80 EPIYIITEFMAKGSLLDFLKSDEG-GKVLL--PKLIDFSAQIAEGMAYIERKNYI-HRDL 135
Query: 474 KASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVTFKSDVYS 528
+A+N+L+ ++DFGL + + R + APE + T KS+V+S
Sbjct: 136 RAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWS 195
Query: 529 FGVLLLELLT-GKAP-------NQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHN 580
FG+LL E++T GK P + S +G +PR E E++D+ M +
Sbjct: 196 FGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPR------MENCPDELYDIMKMCWKE 249
Query: 581 IEEE 584
EE
Sbjct: 250 KAEE 253
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 117/268 (43%), Gaps = 39/268 (14%)
Query: 354 LGKGSVGTSYKAVLEE-----GTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRA 408
LGKG G Y A ++ V+ K E A + + ++E+ ++H N++ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 409 FYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKI 468
+++ L+ +Y P G++ L + D A L++ H S ++
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCH-SKRV 132
Query: 469 VHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG------YRAPEVVETRKVTF 522
+H +IK N+LL + ++DFG + P +R A Y PE++E R
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDYLPPEMIEGRMHDE 188
Query: 523 KSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIE 582
K D++S GVL E L GK P +A+ +E + + R E+T F E R
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR----- 237
Query: 583 EEMVQLLQIAMGCVSTVPDQRPAMQEVV 610
+++ L + P QRP ++EV+
Sbjct: 238 -DLISRL------LKHNPSQRPMLREVL 258
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 100/202 (49%), Gaps = 24/202 (11%)
Query: 352 EVLGKGSVGTSYKAVLEEGTTVVVKRLKEVA-------VGKREFEMQMEVLGKIKHDNVV 404
E +G+G+ G YKA +G V +KR++ A RE + +L ++ H N+V
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIRE----ISLLKELHHPNIV 82
Query: 405 PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIAL-SAARGLAHLH 463
L +S+ LV+++M L G D++++I L RG+AH H
Sbjct: 83 SLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQ------DSQIKIYLYQLLRGVAHCH 136
Query: 464 VSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFG----NTTPPTRVAGYRAPEVVE-TR 518
+I+H ++K N+L+ D ++DFGL FG + T YRAP+V+ ++
Sbjct: 137 -QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSK 195
Query: 519 KVTFKSDVYSFGVLLLELLTGK 540
K + D++S G + E++TGK
Sbjct: 196 KYSTSVDIWSIGCIFAEMITGK 217
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 100/202 (49%), Gaps = 24/202 (11%)
Query: 352 EVLGKGSVGTSYKAVLEEGTTVVVKRLKEVA-------VGKREFEMQMEVLGKIKHDNVV 404
E +G+G+ G YKA +G V +KR++ A RE + +L ++ H N+V
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIRE----ISLLKELHHPNIV 82
Query: 405 PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIAL-SAARGLAHLH 463
L +S+ LV+++M L G D++++I L RG+AH H
Sbjct: 83 SLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQ------DSQIKIYLYQLLRGVAHCH 136
Query: 464 VSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFG----NTTPPTRVAGYRAPEVVE-TR 518
+I+H ++K N+L+ D ++DFGL FG + T YRAP+V+ ++
Sbjct: 137 -QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSK 195
Query: 519 KVTFKSDVYSFGVLLLELLTGK 540
K + D++S G + E++TGK
Sbjct: 196 KYSTSVDIWSIGCIFAEMITGK 217
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 119/265 (44%), Gaps = 33/265 (12%)
Query: 354 LGKGSVGTSYKAVLEEGT-----TVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRA 408
LGKG G Y A ++ V+ K E A + + ++E+ ++H N++ L
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 409 FYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKI 468
+++ L+ +Y P G++ L + D A L++ H S ++
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCH-SKRV 155
Query: 469 VHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG---YRAPEVVETRKVTFKSD 525
+H +IK N+LL + ++DFG + + ++ T + G Y PE++E R K D
Sbjct: 156 IHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 214
Query: 526 VYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEM 585
++S GVL E L GK P +A+ +E + + R E+T F E R ++
Sbjct: 215 LWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR------DL 262
Query: 586 VQLLQIAMGCVSTVPDQRPAMQEVV 610
+ L + P QRP ++EV+
Sbjct: 263 ISRL------LKHNPSQRPMLREVL 281
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 119/265 (44%), Gaps = 33/265 (12%)
Query: 354 LGKGSVGTSYKAVLEE-----GTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRA 408
LGKG G Y A ++ V+ K E A + + ++E+ ++H N++ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 409 FYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKI 468
+++ L+ +Y P G++ L + D A L++ H S ++
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCH-SKRV 129
Query: 469 VHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG---YRAPEVVETRKVTFKSD 525
+H +IK N+LL + ++DFG + + ++ T + G Y PE++E R K D
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 188
Query: 526 VYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEM 585
++S GVL E L GK P +A+ +E + + R E+T F E R ++
Sbjct: 189 LWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR------DL 236
Query: 586 VQLLQIAMGCVSTVPDQRPAMQEVV 610
+ L + P QRP ++EV+
Sbjct: 237 ISRL------LKHNPSQRPMLREVL 255
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 119/265 (44%), Gaps = 33/265 (12%)
Query: 354 LGKGSVGTSYKAVLEEGT-----TVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRA 408
LGKG G Y A ++ V+ K E A + + ++E+ ++H N++ L
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 409 FYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKI 468
+++ L+ +Y P G++ L + D A L++ H S ++
Sbjct: 93 YFHDATRVYLILEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCH-SKRV 146
Query: 469 VHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG---YRAPEVVETRKVTFKSD 525
+H +IK N+LL + ++DFG + + ++ T + G Y PE++E R K D
Sbjct: 147 IHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 205
Query: 526 VYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEM 585
++S GVL E L GK P +A+ +E + + R E+T F E R ++
Sbjct: 206 LWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR------DL 253
Query: 586 VQLLQIAMGCVSTVPDQRPAMQEVV 610
+ L + P QRP ++EV+
Sbjct: 254 ISRL------LKHNPSQRPMLREVL 272
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 119/265 (44%), Gaps = 33/265 (12%)
Query: 354 LGKGSVGTSYKAVLEE-----GTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRA 408
LGKG G Y A ++ V+ K E A + + ++E+ ++H N++ L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 409 FYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKI 468
+++ L+ +Y P G++ L + D A L++ H S ++
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCH-SKRV 134
Query: 469 VHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG---YRAPEVVETRKVTFKSD 525
+H +IK N+LL + ++DFG + + ++ T + G Y PE++E R K D
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVD 193
Query: 526 VYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEM 585
++S GVL E L GK P +A+ +E + + R E+T F E R ++
Sbjct: 194 LWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR------DL 241
Query: 586 VQLLQIAMGCVSTVPDQRPAMQEVV 610
+ L + P QRP ++EV+
Sbjct: 242 ISRL------LKHNPSQRPMLREVL 260
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 118/265 (44%), Gaps = 33/265 (12%)
Query: 354 LGKGSVGTSYKAVLEE-----GTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRA 408
LGKG G Y A ++ V+ K E A + + ++E+ ++H N++ L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 409 FYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKI 468
+++ L+ +Y P G++ L + D A L++ H S ++
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCH-SKRV 134
Query: 469 VHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG---YRAPEVVETRKVTFKSD 525
+H +IK N+LL + ++DFG + + ++ T + G Y PE +E R K D
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEXIEGRXHDEKVD 193
Query: 526 VYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEM 585
++S GVL E L GK P +A+ +E + + R E+T F E R ++
Sbjct: 194 LWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR------DL 241
Query: 586 VQLLQIAMGCVSTVPDQRPAMQEVV 610
+ L + P QRP ++EV+
Sbjct: 242 ISRL------LKHNPSQRPXLREVL 260
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 119/265 (44%), Gaps = 33/265 (12%)
Query: 354 LGKGSVGTSYKAVLEE-----GTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRA 408
LGKG G Y A ++ V+ K E A + + ++E+ ++H N++ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 409 FYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKI 468
+++ L+ +Y P G++ L + D A L++ H S ++
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCH-SKRV 132
Query: 469 VHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG---YRAPEVVETRKVTFKSD 525
+H +IK N+LL + ++DFG + + ++ T + G Y PE++E R K D
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 191
Query: 526 VYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEM 585
++S GVL E L GK P +A+ +E + + R E+T F E R ++
Sbjct: 192 LWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR------DL 239
Query: 586 VQLLQIAMGCVSTVPDQRPAMQEVV 610
+ L + P QRP ++EV+
Sbjct: 240 ISRL------LKHNPSQRPMLREVL 258
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 119/265 (44%), Gaps = 33/265 (12%)
Query: 354 LGKGSVGTSYKAVLEE-----GTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRA 408
LGKG G Y A ++ V+ K E A + + ++E+ ++H N++ L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 409 FYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKI 468
+++ L+ +Y P G++ L + D A L++ H S ++
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCH-SKRV 134
Query: 469 VHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG---YRAPEVVETRKVTFKSD 525
+H +IK N+LL + ++DFG + + ++ T + G Y PE++E R K D
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 193
Query: 526 VYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEM 585
++S GVL E L GK P +A+ +E + + R E+T F E R ++
Sbjct: 194 LWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR------DL 241
Query: 586 VQLLQIAMGCVSTVPDQRPAMQEVV 610
+ L + P QRP ++EV+
Sbjct: 242 ISRL------LKHNPSQRPMLREVL 260
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 119/265 (44%), Gaps = 33/265 (12%)
Query: 354 LGKGSVGTSYKAVLEE-----GTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRA 408
LGKG G Y A ++ V+ K E A + + ++E+ ++H N++ L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 409 FYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKI 468
+++ L+ +Y P G++ L + D A L++ H S ++
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCH-SKRV 130
Query: 469 VHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG---YRAPEVVETRKVTFKSD 525
+H +IK N+LL + ++DFG + + ++ T + G Y PE++E R K D
Sbjct: 131 IHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVD 189
Query: 526 VYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEM 585
++S GVL E L GK P +A+ +E + + R E+T F E R ++
Sbjct: 190 LWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR------DL 237
Query: 586 VQLLQIAMGCVSTVPDQRPAMQEVV 610
+ L + P QRP ++EV+
Sbjct: 238 ISRL------LKHNPSQRPMLREVL 256
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 119/265 (44%), Gaps = 33/265 (12%)
Query: 354 LGKGSVGTSYKAVLEE-----GTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRA 408
LGKG G Y A ++ V+ K E A + + ++E+ ++H N++ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 409 FYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKI 468
+++ L+ +Y P G++ L + D A L++ H S ++
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCH-SKRV 129
Query: 469 VHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG---YRAPEVVETRKVTFKSD 525
+H +IK N+LL + ++DFG + + ++ T + G Y PE++E R K D
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTXLCGTLDYLPPEMIEGRMHDEKVD 188
Query: 526 VYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEM 585
++S GVL E L GK P +A+ +E + + R E+T F E R ++
Sbjct: 189 LWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR------DL 236
Query: 586 VQLLQIAMGCVSTVPDQRPAMQEVV 610
+ L + P QRP ++EV+
Sbjct: 237 ISRL------LKHNPSQRPMLREVL 255
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 119/265 (44%), Gaps = 33/265 (12%)
Query: 354 LGKGSVGTSYKAVLEE-----GTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRA 408
LGKG G Y A ++ V+ K E A + + ++E+ ++H N++ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 409 FYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKI 468
+++ L+ +Y P G++ L + D A L++ H S ++
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCH-SKRV 129
Query: 469 VHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG---YRAPEVVETRKVTFKSD 525
+H +IK N+LL + ++DFG + + ++ T + G Y PE++E R K D
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVD 188
Query: 526 VYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEM 585
++S GVL E L GK P +A+ +E + + R E+T F E R ++
Sbjct: 189 LWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR------DL 236
Query: 586 VQLLQIAMGCVSTVPDQRPAMQEVV 610
+ L + P QRP ++EV+
Sbjct: 237 ISRL------LKHNPSQRPMLREVL 255
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 118/265 (44%), Gaps = 33/265 (12%)
Query: 354 LGKGSVGTSYKAVLEE-----GTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRA 408
LGKG G Y A ++ V+ K E A + + ++E+ ++H N++ L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 409 FYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKI 468
+++ L+ +Y P G + L + D A L++ H S ++
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKL-----SKFDEQRTATYITELANALSYCH-SKRV 134
Query: 469 VHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG---YRAPEVVETRKVTFKSD 525
+H +IK N+LL + ++DFG + + ++ T + G Y PE++E R K D
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 193
Query: 526 VYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEM 585
++S GVL E L GK P +A+ +E + + R E+T F E R ++
Sbjct: 194 LWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR------DL 241
Query: 586 VQLLQIAMGCVSTVPDQRPAMQEVV 610
+ L + P QRP ++EV+
Sbjct: 242 ISRL------LKHNPSQRPMLREVL 260
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 98/197 (49%), Gaps = 13/197 (6%)
Query: 352 EVLGKGSVGTSYKAV-LEEGTTVVVKRLKEVAVGKREFEM-QMEVLGKIKHDNVVPLRAF 409
E +G+G+ GT Y A+ + G V ++++ K+E + ++ V+ + K+ N+V
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 410 YYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIV 469
Y DE +V +Y+ GSL+ ++ T +D + + L LH S +++
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVV------TETCMDEGQIAAVCRECLQALEFLH-SNQVI 139
Query: 470 HGNIKASNILLRPDHDACVSDFG----LNPLFGNTTPPTRVAGYRAPEVVETRKVTFKSD 525
H NIK+ NILL D ++DFG + P + + APEVV + K D
Sbjct: 140 HRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVD 199
Query: 526 VYSFGVLLLELLTGKAP 542
++S G++ +E++ G+ P
Sbjct: 200 IWSLGIMAIEMIEGEPP 216
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 119/265 (44%), Gaps = 33/265 (12%)
Query: 354 LGKGSVGTSYKAVLEE-----GTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRA 408
LGKG G Y A ++ V+ K E A + + ++E+ ++H N++ L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 409 FYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKI 468
+++ L+ +Y P G++ L + D A L++ H S ++
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCH-SKRV 130
Query: 469 VHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG---YRAPEVVETRKVTFKSD 525
+H +IK N+LL + ++DFG + ++ T ++G Y PE++E R K D
Sbjct: 131 IHRDIKPENLLLGSAGELKIADFGWS-CHAPSSRRTTLSGTLDYLPPEMIEGRMHDEKVD 189
Query: 526 VYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEM 585
++S GVL E L GK P +A+ +E + + R E+T F E R ++
Sbjct: 190 LWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR------DL 237
Query: 586 VQLLQIAMGCVSTVPDQRPAMQEVV 610
+ L + P QRP ++EV+
Sbjct: 238 ISRL------LKHNPSQRPMLREVL 256
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 119/265 (44%), Gaps = 33/265 (12%)
Query: 354 LGKGSVGTSYKAVLEE-----GTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRA 408
LGKG G Y A ++ V+ K E A + + ++E+ ++H N++ L
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 409 FYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKI 468
+++ L+ +Y P G++ L + D A L++ H S ++
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCH-SKRV 133
Query: 469 VHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG---YRAPEVVETRKVTFKSD 525
+H +IK N+LL + ++DFG + + ++ T + G Y PE++E R K D
Sbjct: 134 IHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 192
Query: 526 VYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEM 585
++S GVL E L GK P +A+ +E + + R E+T F E R ++
Sbjct: 193 LWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR------DL 240
Query: 586 VQLLQIAMGCVSTVPDQRPAMQEVV 610
+ L + P QRP ++EV+
Sbjct: 241 ISRL------LKHNPSQRPMLREVL 259
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 117/268 (43%), Gaps = 39/268 (14%)
Query: 354 LGKGSVGTSYKAVLEE-----GTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRA 408
LGKG G Y A ++ V+ K E A + + ++E+ ++H N++ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 409 FYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKI 468
+++ L+ +Y P G++ L + D A L++ H S ++
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCH-SKRV 129
Query: 469 VHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG------YRAPEVVETRKVTF 522
+H +IK N+LL + ++DFG + P +R A Y PE++E R
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDYLPPEMIEGRMHDE 185
Query: 523 KSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIE 582
K D++S GVL E L GK P +A+ +E + + R E+T F E R
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR----- 234
Query: 583 EEMVQLLQIAMGCVSTVPDQRPAMQEVV 610
+++ L + P QRP ++EV+
Sbjct: 235 -DLISRL------LKHNPSQRPMLREVL 255
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 119/265 (44%), Gaps = 33/265 (12%)
Query: 354 LGKGSVGTSYKAVLEE-----GTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRA 408
LGKG G Y A ++ V+ K E A + + ++E+ ++H N++ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 409 FYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKI 468
+++ L+ +Y P G++ L + D A L++ H S ++
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCH-SKRV 129
Query: 469 VHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG---YRAPEVVETRKVTFKSD 525
+H +IK N+LL + ++DFG + + ++ T + G Y PE++E R K D
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVD 188
Query: 526 VYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEM 585
++S GVL E L GK P +A+ +E + + R E+T F E R ++
Sbjct: 189 LWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR------DL 236
Query: 586 VQLLQIAMGCVSTVPDQRPAMQEVV 610
+ L + P QRP ++EV+
Sbjct: 237 ISRL------LKHNPSQRPMLREVL 255
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 119/265 (44%), Gaps = 33/265 (12%)
Query: 354 LGKGSVGTSYKAVLEE-----GTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRA 408
LGKG G Y A ++ V+ K E A + + ++E+ ++H N++ L
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 409 FYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKI 468
+++ L+ +Y P G++ L + D A L++ H S ++
Sbjct: 75 YFHDATRVYLILEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCH-SKRV 128
Query: 469 VHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG---YRAPEVVETRKVTFKSD 525
+H +IK N+LL + ++DFG + + ++ T + G Y PE++E R K D
Sbjct: 129 IHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 187
Query: 526 VYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEM 585
++S GVL E L GK P +A+ +E + + R E+T F E R ++
Sbjct: 188 LWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR------DL 235
Query: 586 VQLLQIAMGCVSTVPDQRPAMQEVV 610
+ L + P QRP ++EV+
Sbjct: 236 ISRL------LKHNPSQRPMLREVL 254
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 141/333 (42%), Gaps = 62/333 (18%)
Query: 332 VFFEGGVYSFDLEDLLRASAE----------VLGKGSVGTSYKAVLEEGT-----TVVVK 376
++F+G + S + +L+ + E V+G G G YK +L+ + V +K
Sbjct: 20 LYFQGAMGSDPNQAVLKFTTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIK 79
Query: 377 RLKEVAVGKREFEMQME--VLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHG 434
LK K+ + E ++G+ H N++ L +++ +YM G+L L
Sbjct: 80 TLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLRE 139
Query: 435 SRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLN 494
G L +R + + LA+++ VH ++ A NIL+ + VSDFGL+
Sbjct: 140 KDGEFSV-LQLVGMLRGIAAGMKYLANMNY----VHRDLAARNILVNSNLVCKVSDFGLS 194
Query: 495 PLFGNTTPPTRVAG-------YRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASL 547
+ + T + APE + RK T SDV+SFG+++ E++T
Sbjct: 195 RVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMT--------Y 246
Query: 548 GEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEM-------VQLLQIAMGCVSTVP 600
GE P W E+ + E+M+ N + + Q+ M C
Sbjct: 247 GER----PYW-----------ELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQER 291
Query: 601 DQRPAMQEVVRMIENMNRGETDDGLRQSSD-DP 632
+RP ++V +++ + R D L+ +D DP
Sbjct: 292 ARRPKFADIVSILDKLIRAP--DSLKTLADFDP 322
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 119/265 (44%), Gaps = 33/265 (12%)
Query: 354 LGKGSVGTSYKAVLEE-----GTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRA 408
LGKG G Y A ++ V+ K E A + + ++E+ ++H N++ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 409 FYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKI 468
+++ L+ +Y P G++ L + D A L++ H S ++
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCH-SKRV 132
Query: 469 VHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG---YRAPEVVETRKVTFKSD 525
+H +IK N+LL + ++DFG + + ++ T + G Y PE++E R K D
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 191
Query: 526 VYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEM 585
++S GVL E L GK P +A+ +E + + R E+T F E R ++
Sbjct: 192 LWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR------DL 239
Query: 586 VQLLQIAMGCVSTVPDQRPAMQEVV 610
+ L + P QRP ++EV+
Sbjct: 240 ISRL------LKHNPSQRPMLREVL 258
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 119/265 (44%), Gaps = 33/265 (12%)
Query: 354 LGKGSVGTSYKAVLEE-----GTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRA 408
LGKG G Y A ++ V+ K E A + + ++E+ ++H N++ L
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 409 FYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKI 468
+++ L+ +Y P G++ L + D A L++ H S ++
Sbjct: 73 YFHDATRVYLILEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCH-SKRV 126
Query: 469 VHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG---YRAPEVVETRKVTFKSD 525
+H +IK N+LL + ++DFG + + ++ T + G Y PE++E R K D
Sbjct: 127 IHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 185
Query: 526 VYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEM 585
++S GVL E L GK P +A+ +E + + R E+T F E R ++
Sbjct: 186 LWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR------DL 233
Query: 586 VQLLQIAMGCVSTVPDQRPAMQEVV 610
+ L + P QRP ++EV+
Sbjct: 234 ISRL------LKHNPSQRPMLREVL 252
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 116/268 (43%), Gaps = 39/268 (14%)
Query: 354 LGKGSVGTSYKAVLEEGT-----TVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRA 408
LGKG G Y A ++ V+ K E A + + ++E+ ++H N++ L
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 409 FYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKI 468
+++ L+ +Y P G++ L + D A L++ H S ++
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCH-SKRV 155
Query: 469 VHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTR------VAGYRAPEVVETRKVTF 522
+H +IK N+LL + ++DFG + P +R Y PE++E R
Sbjct: 156 IHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDE 211
Query: 523 KSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIE 582
K D++S GVL E L GK P +A+ +E + + R E+T F E R
Sbjct: 212 KVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR----- 260
Query: 583 EEMVQLLQIAMGCVSTVPDQRPAMQEVV 610
+++ L + P QRP ++EV+
Sbjct: 261 -DLISRL------LKHNPSQRPMLREVL 281
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 116/268 (43%), Gaps = 30/268 (11%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSK 413
LG G G + V VK +KE ++ + EF + + + K+ H +V +
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKE 75
Query: 414 DEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNI 473
+V +Y+ G L L S G G P + + G+A L S + +H ++
Sbjct: 76 YPIYIVTEYISNGCLLNYLR-SHGKGLEP---SQLLEMCYDVCEGMAFLE-SHQFIHRDL 130
Query: 474 KASNILLRPDHDACV--SDFGLNPLFGNTTPPTRV-----AGYRAPEVVETRKVTFKSDV 526
A N L+ D D CV SDFG+ + + V + APEV K + KSDV
Sbjct: 131 AARNCLV--DRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDV 188
Query: 527 YSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMV 586
++FG+L+ E+ SLG+ DL + V++ ++ R H +
Sbjct: 189 WAFGILMWEVF--------SLGKMPYDLYTNSEVVLKVSQGHRLY-----RPHLASD--- 232
Query: 587 QLLQIAMGCVSTVPDQRPAMQEVVRMIE 614
+ QI C +P++RP Q+++ IE
Sbjct: 233 TIYQIMYSCWHELPEKRPTFQQLLSSIE 260
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 106/230 (46%), Gaps = 22/230 (9%)
Query: 332 VFFEGGVYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEV-----AVGKR 386
++F+G + D L LG G+ G + ++EE ++ + + +K + V
Sbjct: 14 LYFQGTI------DDLFIFKRKLGSGAFGDVH--LVEERSSGLERVIKTINKDRSQVPME 65
Query: 387 EFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWD 446
+ E ++EVL + H N++ + + +V + G L + ++ G+ L
Sbjct: 66 QIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKA-LSEG 124
Query: 447 NRMRIALSAARGLAHLHVSGKIVHGNIKASNILLR---PDHDACVSDFGLNPLFGNTTPP 503
+ LA+ H S +VH ++K NIL + P + DFGL LF +
Sbjct: 125 YVAELMKQMMNALAYFH-SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHS 183
Query: 504 TRVAG---YRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEE 550
T AG Y APEV + R VTFK D++S GV++ LLTG P + EE
Sbjct: 184 TNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEE 232
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 116/268 (43%), Gaps = 39/268 (14%)
Query: 354 LGKGSVGTSYKAVLEE-----GTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRA 408
LGKG G Y A ++ V+ K E A + + ++E+ ++H N++ L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 409 FYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKI 468
+++ L+ +Y P G++ L + D A L++ H S ++
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCH-SKRV 130
Query: 469 VHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTR------VAGYRAPEVVETRKVTF 522
+H +IK N+LL + ++DFG + P +R Y PE++E R
Sbjct: 131 IHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDE 186
Query: 523 KSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIE 582
K D++S GVL E L GK P +A+ +E + + R E+T F E R
Sbjct: 187 KVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR----- 235
Query: 583 EEMVQLLQIAMGCVSTVPDQRPAMQEVV 610
+++ L + P QRP ++EV+
Sbjct: 236 -DLISRL------LKHNPSQRPMLREVL 256
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 116/268 (43%), Gaps = 39/268 (14%)
Query: 354 LGKGSVGTSYKAVLEE-----GTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRA 408
LGKG G Y A + V+ K E A + + ++E+ ++H N++ L
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 409 FYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKI 468
+++ L+ +Y P G++ L + D A L++ H S K+
Sbjct: 76 YFHDSTRVYLILEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCH-SKKV 129
Query: 469 VHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG------YRAPEVVETRKVTF 522
+H +IK N+LL + ++DFG + P +R A Y PE++E R
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDYLPPEMIEGRMHDE 185
Query: 523 KSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIE 582
K D++S GVL E L GK P +A+ ++ + + R E+T F E R
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQDT------YKRISRVEFTFPDFVTEGAR----- 234
Query: 583 EEMVQLLQIAMGCVSTVPDQRPAMQEVV 610
+++ L + P QRP ++EV+
Sbjct: 235 -DLISRL------LKHNPSQRPMLREVL 255
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 116/268 (43%), Gaps = 39/268 (14%)
Query: 354 LGKGSVGTSYKAVLEE-----GTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRA 408
LGKG G Y A ++ V+ K E A + + ++E+ ++H N++ L
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 409 FYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKI 468
+++ L+ +Y P G++ L + D A L++ H S ++
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCH-SKRV 131
Query: 469 VHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTR------VAGYRAPEVVETRKVTF 522
+H +IK N+LL + ++DFG + P +R Y PE++E R
Sbjct: 132 IHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDE 187
Query: 523 KSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIE 582
K D++S GVL E L GK P +A+ +E + + R E+T F E R
Sbjct: 188 KVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR----- 236
Query: 583 EEMVQLLQIAMGCVSTVPDQRPAMQEVV 610
+++ L + P QRP ++EV+
Sbjct: 237 -DLISRL------LKHNPSQRPMLREVL 257
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 116/268 (43%), Gaps = 39/268 (14%)
Query: 354 LGKGSVGTSYKAVLEE-----GTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRA 408
LGKG G Y A ++ V+ K E A + + ++E+ ++H N++ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 409 FYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKI 468
+++ L+ +Y P G++ L + D A L++ H S ++
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCH-SKRV 132
Query: 469 VHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTR------VAGYRAPEVVETRKVTF 522
+H +IK N+LL + ++DFG + P +R Y PE++E R
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDE 188
Query: 523 KSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIE 582
K D++S GVL E L GK P +A+ +E + + R E+T F E R
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR----- 237
Query: 583 EEMVQLLQIAMGCVSTVPDQRPAMQEVV 610
+++ L + P QRP ++EV+
Sbjct: 238 -DLISRL------LKHNPSQRPMLREVL 258
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 119/265 (44%), Gaps = 33/265 (12%)
Query: 354 LGKGSVGTSYKAVLEE-----GTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRA 408
LGKG G Y A ++ V+ K E A + + ++E+ ++H N++ L
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 409 FYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKI 468
+++ L+ +Y P G++ L + D A L++ H S ++
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCH-SKRV 131
Query: 469 VHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG---YRAPEVVETRKVTFKSD 525
+H +IK N+LL + +++FG + + ++ T + G Y PE++E R K D
Sbjct: 132 IHRDIKPENLLLGSAGELKIANFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 190
Query: 526 VYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEM 585
++S GVL E L GK P +A+ +E + + R E+T F E R ++
Sbjct: 191 LWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR------DL 238
Query: 586 VQLLQIAMGCVSTVPDQRPAMQEVV 610
+ L + P QRP ++EV+
Sbjct: 239 ISRL------LKHNPSQRPMLREVL 257
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 102/211 (48%), Gaps = 34/211 (16%)
Query: 352 EVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAF- 409
E +GKG G ++ + E V + ++ RE E+ V+ ++H+N++ A
Sbjct: 43 ECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVM--LRHENILGFIASD 100
Query: 410 ---YYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV-- 464
+S + L+ Y GSL L T LD + +RI LS A GLAHLH+
Sbjct: 101 MTSRHSSTQLWLITHYHEMGSLYDYLQ------LTTLDTVSCLRIVLSIASGLAHLHIEI 154
Query: 465 ---SGK--IVHGNIKASNILLRPDHDACVSDFGLNPLFGNTT--------PPTRVAGYRA 511
GK I H ++K+ NIL++ + C++D GL + +T P Y A
Sbjct: 155 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMA 214
Query: 512 PEVV-ETRKV-TFKS----DVYSFGVLLLEL 536
PEV+ ET +V F S D+++FG++L E+
Sbjct: 215 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 125/291 (42%), Gaps = 43/291 (14%)
Query: 349 ASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGK--REFEMQMEVLGKI-KHDNVVP 405
A +V+ +VG K +E TV VK LK+ A K + +ME++ I KH N++
Sbjct: 47 AFGQVVMAEAVGID-KDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIN 105
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSG--------RTP---LDWDNRMRIALS 454
L ++ +Y G+L L R G R P + + + +
Sbjct: 106 LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQ 165
Query: 455 AARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLN------PLFGNTTPPTRVAG 508
ARG+ +L S K +H ++ A N+L+ ++ ++DFGL + NTT
Sbjct: 166 LARGMEYL-ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVK 224
Query: 509 YRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWT 567
+ APE + R T +SDV+SFGVL+ E+ T G +P EE L +
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK----------- 273
Query: 568 AEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNR 618
E R +L + C VP QRP +++V E+++R
Sbjct: 274 ------EGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV---EDLDR 315
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 106/215 (49%), Gaps = 17/215 (7%)
Query: 352 EVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFE-----MQMEVLGKIKHDNVVPL 406
E LG G+ T YK + TT V LKEV + E ++ ++ ++KH+N+V L
Sbjct: 11 EKLGNGTYATVYKGL--NKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRL 68
Query: 407 RAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTP--LDWDNRMRIALSAARGLAHLHV 464
+++++ LV+++M L + SR G TP L+ + +GLA H
Sbjct: 69 YDVIHTENKLTLVFEFM-DNDLKKYM-DSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH- 125
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGLNPLFG---NTTPPTRVA-GYRAPEVVE-TRK 519
KI+H ++K N+L+ + DFGL FG NT V YRAP+V+ +R
Sbjct: 126 ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRT 185
Query: 520 VTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDL 554
+ D++S G +L E++TGK + EE + L
Sbjct: 186 YSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKL 220
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 98/197 (49%), Gaps = 13/197 (6%)
Query: 352 EVLGKGSVGTSYKAV-LEEGTTVVVKRLKEVAVGKREFEM-QMEVLGKIKHDNVVPLRAF 409
E +G+G+ GT Y A+ + G V ++++ K+E + ++ V+ + K+ N+V
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 410 YYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIV 469
Y DE +V +Y+ GSL+ ++ T +D + + L LH S +++
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVV------TETCMDEGQIAAVCRECLQALEFLH-SNQVI 138
Query: 470 HGNIKASNILLRPDHDACVSDFG----LNPLFGNTTPPTRVAGYRAPEVVETRKVTFKSD 525
H +IK+ NILL D ++DFG + P + + APEVV + K D
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVD 198
Query: 526 VYSFGVLLLELLTGKAP 542
++S G++ +E++ G+ P
Sbjct: 199 IWSLGIMAIEMIEGEPP 215
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 98/197 (49%), Gaps = 13/197 (6%)
Query: 352 EVLGKGSVGTSYKAV-LEEGTTVVVKRLKEVAVGKREFEM-QMEVLGKIKHDNVVPLRAF 409
E +G+G+ GT Y A+ + G V ++++ K+E + ++ V+ + K+ N+V
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 410 YYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIV 469
Y DE +V +Y+ GSL+ ++ T +D + + L LH S +++
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVV------TETCMDEGQIAAVCRECLQALEFLH-SNQVI 138
Query: 470 HGNIKASNILLRPDHDACVSDFG----LNPLFGNTTPPTRVAGYRAPEVVETRKVTFKSD 525
H +IK+ NILL D ++DFG + P + + APEVV + K D
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVD 198
Query: 526 VYSFGVLLLELLTGKAP 542
++S G++ +E++ G+ P
Sbjct: 199 IWSLGIMAIEMIEGEPP 215
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 98/197 (49%), Gaps = 13/197 (6%)
Query: 352 EVLGKGSVGTSYKAV-LEEGTTVVVKRLKEVAVGKREFEM-QMEVLGKIKHDNVVPLRAF 409
E +G+G+ GT Y A+ + G V ++++ K+E + ++ V+ + K+ N+V
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 410 YYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIV 469
Y DE +V +Y+ GSL+ ++ T +D + + L LH S +++
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVV------TETCMDEGQIAAVCRECLQALEFLH-SNQVI 139
Query: 470 HGNIKASNILLRPDHDACVSDFG----LNPLFGNTTPPTRVAGYRAPEVVETRKVTFKSD 525
H +IK+ NILL D ++DFG + P + + APEVV + K D
Sbjct: 140 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVD 199
Query: 526 VYSFGVLLLELLTGKAP 542
++S G++ +E++ G+ P
Sbjct: 200 IWSLGIMAIEMIEGEPP 216
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 119/265 (44%), Gaps = 33/265 (12%)
Query: 354 LGKGSVGTSYKAVLEE-----GTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRA 408
LGKG G Y A ++ V+ K E A + + ++E+ ++H N++ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 409 FYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKI 468
+++ L+ +Y P G++ L + D A L++ H S ++
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCH-SKRV 132
Query: 469 VHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG---YRAPEVVETRKVTFKSD 525
+H +IK N+LL + +++FG + + ++ T + G Y PE++E R K D
Sbjct: 133 IHRDIKPENLLLGSAGELKIANFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 191
Query: 526 VYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEM 585
++S GVL E L GK P +A+ +E + + R E+T F E R ++
Sbjct: 192 LWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR------DL 239
Query: 586 VQLLQIAMGCVSTVPDQRPAMQEVV 610
+ L + P QRP ++EV+
Sbjct: 240 ISRL------LKHNPSQRPMLREVL 258
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 116/268 (43%), Gaps = 39/268 (14%)
Query: 354 LGKGSVGTSYKAVLEE-----GTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRA 408
LGKG G Y A ++ V+ K E A + + ++E+ ++H N++ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 409 FYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKI 468
+++ L+ +Y P G++ L + D A L++ H S ++
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCH-SKRV 129
Query: 469 VHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTR------VAGYRAPEVVETRKVTF 522
+H +IK N+LL + ++DFG + P +R Y PE++E R
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDE 185
Query: 523 KSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIE 582
K D++S GVL E L GK P +A+ +E + + R E+T F E R
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR----- 234
Query: 583 EEMVQLLQIAMGCVSTVPDQRPAMQEVV 610
+++ L + P QRP ++EV+
Sbjct: 235 -DLISRL------LKHNPSQRPMLREVL 255
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 98/197 (49%), Gaps = 13/197 (6%)
Query: 352 EVLGKGSVGTSYKAV-LEEGTTVVVKRLKEVAVGKREFEM-QMEVLGKIKHDNVVPLRAF 409
E +G+G+ GT Y A+ + G V ++++ K+E + ++ V+ + K+ N+V
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 410 YYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIV 469
Y DE +V +Y+ GSL+ ++ T +D + + L LH S +++
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVV------TETCMDEGQIAAVCRECLQALEFLH-SNQVI 138
Query: 470 HGNIKASNILLRPDHDACVSDFG----LNPLFGNTTPPTRVAGYRAPEVVETRKVTFKSD 525
H +IK+ NILL D ++DFG + P + + APEVV + K D
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVD 198
Query: 526 VYSFGVLLLELLTGKAP 542
++S G++ +E++ G+ P
Sbjct: 199 IWSLGIMAIEMIEGEPP 215
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 115/268 (42%), Gaps = 39/268 (14%)
Query: 354 LGKGSVGTSYKAVLEE-----GTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRA 408
LGKG G Y A ++ V+ K E A + + ++E+ ++H N++ L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 409 FYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKI 468
+++ L+ +Y P G + L + D A L++ H S ++
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKL-----SKFDEQRTATYITELANALSYCH-SKRV 134
Query: 469 VHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTR------VAGYRAPEVVETRKVTF 522
+H +IK N+LL + ++DFG + P +R Y PE++E R
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLXGTLDYLPPEMIEGRMHDE 190
Query: 523 KSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIE 582
K D++S GVL E L GK P +A+ +E + + R E+T F E R
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR----- 239
Query: 583 EEMVQLLQIAMGCVSTVPDQRPAMQEVV 610
+++ L + P QRP ++EV+
Sbjct: 240 -DLISRL------LKHNPSQRPMLREVL 260
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 102/211 (48%), Gaps = 34/211 (16%)
Query: 352 EVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAF- 409
E +GKG G ++ + E V + ++ RE E+ V+ ++H+N++ A
Sbjct: 14 ECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVM--LRHENILGFIASD 71
Query: 410 ---YYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV-- 464
+S + L+ Y GSL L T LD + +RI LS A GLAHLH+
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQ------LTTLDTVSCLRIVLSIASGLAHLHIEI 125
Query: 465 ---SGK--IVHGNIKASNILLRPDHDACVSDFGLNPLFGNTT--------PPTRVAGYRA 511
GK I H ++K+ NIL++ + C++D GL + +T P Y A
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMA 185
Query: 512 PEVV-ETRKV-TFKS----DVYSFGVLLLEL 536
PEV+ ET +V F S D+++FG++L E+
Sbjct: 186 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 102/211 (48%), Gaps = 34/211 (16%)
Query: 352 EVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAF- 409
E +GKG G ++ + E V + ++ RE E+ V+ ++H+N++ A
Sbjct: 14 ECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVM--LRHENILGFIASD 71
Query: 410 ---YYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV-- 464
+S + L+ Y GSL L T LD + +RI LS A GLAHLH+
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQ------LTTLDTVSCLRIVLSIASGLAHLHIEI 125
Query: 465 ---SGK--IVHGNIKASNILLRPDHDACVSDFGLNPLFGNTT--------PPTRVAGYRA 511
GK I H ++K+ NIL++ + C++D GL + +T P Y A
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMA 185
Query: 512 PEVV-ETRKV-TFKS----DVYSFGVLLLEL 536
PEV+ ET +V F S D+++FG++L E+
Sbjct: 186 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 116/268 (43%), Gaps = 39/268 (14%)
Query: 354 LGKGSVGTSYKAVLEE-----GTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRA 408
LGKG G Y A ++ V+ K E A + + ++E+ ++H N++ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 409 FYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKI 468
+++ L+ +Y P G++ L + D A L++ H S ++
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCH-SKRV 132
Query: 469 VHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTR------VAGYRAPEVVETRKVTF 522
+H +IK N+LL + ++DFG + P +R Y PE++E R
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDE 188
Query: 523 KSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIE 582
K D++S GVL E L GK P +A+ +E + + R E+T F E R
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR----- 237
Query: 583 EEMVQLLQIAMGCVSTVPDQRPAMQEVV 610
+++ L + P QRP ++EV+
Sbjct: 238 -DLISRL------LKHNPSQRPMLREVL 258
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 103/216 (47%), Gaps = 38/216 (17%)
Query: 349 ASAEVLGKGSVGTSYKAVLEEGTTVVVKRL--KEVAVGKREFEMQMEVLGKIKHDNVVPL 406
A E +GKG G ++ L G +V VK ++ RE E+ VL ++HDN++
Sbjct: 11 ALVECVGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFRETEIYNTVL--LRHDNILGF 67
Query: 407 RAFYY----SKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHL 462
A S + L+ Y GSL L R L+ +R+A+SAA GLAHL
Sbjct: 68 IASDMTSRNSSTQLWLITHYHEHGSLYDFLQ------RQTLEPHLALRLAVSAACGLAHL 121
Query: 463 HV-----SGK--IVHGNIKASNILLRPDHDACVSDFGLNPL---------FGNTTPPTRV 506
HV GK I H + K+ N+L++ + C++D GL + GN P
Sbjct: 122 HVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGN-NPRVGT 180
Query: 507 AGYRAPEVV--ETRKVTFKS----DVYSFGVLLLEL 536
Y APEV+ + R F+S D+++FG++L E+
Sbjct: 181 KRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 96/203 (47%), Gaps = 23/203 (11%)
Query: 351 AEVLGKGSVGTSYKAV-LEEGTTV----VVKRLKEVAVGKREFEMQME--VLGKIKHDNV 403
+VLG G+ GT YK + + EG TV +K L E K E E ++ + H ++
Sbjct: 20 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHL 79
Query: 404 VPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGS--GRTPLDWDNRMRIALSAARGLAH 461
V L S +L V MP G L +H + + + L+W + A+G+ +
Sbjct: 80 VRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIAKGMMY 132
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAGYRAP------EVV 515
L ++VH ++ A N+L++ + ++DFGL L G + P E +
Sbjct: 133 LE-ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECI 191
Query: 516 ETRKVTFKSDVYSFGVLLLELLT 538
RK T +SDV+S+GV + EL+T
Sbjct: 192 HYRKFTHQSDVWSYGVTIWELMT 214
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 124/291 (42%), Gaps = 43/291 (14%)
Query: 349 ASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGK--REFEMQMEVLGKI-KHDNVVP 405
A +V+ +VG K +E TV VK LK+ A K + +ME++ I KH N++
Sbjct: 47 AFGQVVMAEAVGID-KDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIT 105
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSG--------RTP---LDWDNRMRIALS 454
L ++ +Y G+L L R G R P + + + +
Sbjct: 106 LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQ 165
Query: 455 AARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLN------PLFGNTTPPTRVAG 508
ARG+ +L S K +H ++ A N+L+ ++ ++DFGL + TT
Sbjct: 166 LARGMEYL-ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK 224
Query: 509 YRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWT 567
+ APE + R T +SDV+SFGVL+ E+ T G +P EE L +
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK----------- 273
Query: 568 AEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNR 618
E R +L + C VP QRP +++V E+++R
Sbjct: 274 ------EGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV---EDLDR 315
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 125/297 (42%), Gaps = 56/297 (18%)
Query: 354 LGKGSVGTSYKAVLEEG-----------TTVVVKRLKEVAVGKREFEM--QMEVLGKI-K 399
LG+G+ G + VL E T V VK LK A K ++ +ME++ I K
Sbjct: 77 LGEGAFG---QVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 133
Query: 400 HDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSG-----------RTPLDWDNR 448
H N++ L ++ +Y G+L L R G L +
Sbjct: 134 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 193
Query: 449 MRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLN------PLFGNTTP 502
+ A ARG+ +L S K +H ++ A N+L+ D+ ++DFGL + TT
Sbjct: 194 VSCAYQVARGMEYL-ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 252
Query: 503 PTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSV 561
+ APE + R T +SDV+SFGVLL E+ T G +P EE L + +
Sbjct: 253 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRM 312
Query: 562 VREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNR 618
+ N E+ +++ C VP QRP +++V E+++R
Sbjct: 313 DKPS--------------NCTNELYMMMR---DCWHAVPSQRPTFKQLV---EDLDR 349
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 96/203 (47%), Gaps = 23/203 (11%)
Query: 351 AEVLGKGSVGTSYKAV-LEEGTTV----VVKRLKEVAVGKREFEMQME--VLGKIKHDNV 403
+VLG G+ GT YK + + EG TV +K L E K E E ++ + H ++
Sbjct: 43 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHL 102
Query: 404 VPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGS--GRTPLDWDNRMRIALSAARGLAH 461
V L S +L V MP G L +H + + + L+W + A+G+ +
Sbjct: 103 VRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIAKGMMY 155
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAGYRAP------EVV 515
L ++VH ++ A N+L++ + ++DFGL L G + P E +
Sbjct: 156 LE-ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECI 214
Query: 516 ETRKVTFKSDVYSFGVLLLELLT 538
RK T +SDV+S+GV + EL+T
Sbjct: 215 HYRKFTHQSDVWSYGVTIWELMT 237
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 21/207 (10%)
Query: 352 EVLGKGSVGT----SYKAVLEEGTTVVVKRLK--EVAVGKREFEMQMEVLGKIKHDNVVP 405
EV+G G G KA ++ + V +K LK +REF + ++G+ +H N++
Sbjct: 22 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIR 81
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
L + +++ ++M G+L + L + G T + +R S R LA +
Sbjct: 82 LEGVVTNSMPVMILTEFMENGALDSFLRLNDGQF-TVIQLVGMLRGIASGMRYLAEM--- 137
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLF-GNTTPPTRVAG--------YRAPEVVE 516
VH ++ A NIL+ + VSDFGL+ N++ PT + + APE +
Sbjct: 138 -SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIA 196
Query: 517 TRKVTFKSDVYSFGVLLLELLT-GKAP 542
RK T SD +S+G+++ E+++ G+ P
Sbjct: 197 FRKFTSASDAWSYGIVMWEVMSFGERP 223
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 114/258 (44%), Gaps = 48/258 (18%)
Query: 352 EVLGKGSVGTSYKAVL------EEGTTVVVKRLKEVAVG--KREFEMQMEVLGKIKHDNV 403
E LG+ G YK L E+ V +K LK+ A G + EF + + +++H NV
Sbjct: 32 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 91
Query: 404 VPLRAFYYSKDEKL-LVYDYMPAGSLSALL-----HGSRGSG------RTPLDWDNRMRI 451
V L +KD+ L +++ Y G L L H GS ++ L+ + + +
Sbjct: 92 VCLLGVV-TKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHL 150
Query: 452 ALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL---------NPLFGNTTP 502
A G+ +L S +VH ++ N+L+ + +SD GL L GN+
Sbjct: 151 VAQIAAGMEYLS-SHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLL 209
Query: 503 PTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGI--------- 552
P R + APE + K + SD++S+GV+L E+ + G P ++ +
Sbjct: 210 PIR---WMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVL 266
Query: 553 ----DLPRWVQSVVREEW 566
D P WV +++ E W
Sbjct: 267 PCPDDCPAWVYALMIECW 284
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 114/233 (48%), Gaps = 11/233 (4%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVG---KREFEMQMEVLGKIKHDNVVPLRAFY 410
LG G+ G +K + V+ ++L + + + + +++VL + +V +
Sbjct: 33 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 92
Query: 411 YSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVH 470
YS E + ++M GSL +L + +GR P ++ IA+ +GL +L KI+H
Sbjct: 93 YSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAV--IKGLTYLREKHKIMH 147
Query: 471 GNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVA--GYRAPEVVETRKVTFKSDVYS 528
++K SNIL+ + + DFG++ ++ + V Y +PE ++ + +SD++S
Sbjct: 148 RDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWS 207
Query: 529 FGVLLLELLTGKAPNQASLGEEGI-DLPRWVQSVVREEWTAEVFDVELMRYHN 580
G+ L+E+ G+ P + G I +L ++ + + + VF +E + N
Sbjct: 208 MGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVN 260
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 134/332 (40%), Gaps = 52/332 (15%)
Query: 307 TMEAGTSSSKDDITGGAAEAD--RNKLVFFEGGVYSFDLEDLLRASAEVLGKGSVGTSYK 364
M +G+S S + G + N F + V+ D++ LG+G+ G +
Sbjct: 2 AMGSGSSLSPTEGKGSGLQGHIIENPQYFSDACVHHIKRRDIVLKWE--LGEGAFGKVFL 59
Query: 365 AVL------EEGTTVVVKRLKEVAVGKRE-FEMQMEVLGKIKHDNVVPLRAFYYSKDEKL 417
A ++ V VK LKE + R+ F+ + E+L ++H ++V L
Sbjct: 60 AECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLL 119
Query: 418 LVYDYMPAGSL----------SALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGK 467
+V++YM G L + LL G PL + +A A G+ +L
Sbjct: 120 MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL-AGLH 178
Query: 468 IVHGNIKASNILLRPDHDACVSDFGLNP---------LFGNTTPPTRVAGYRAPEVVETR 518
VH ++ N L+ + DFG++ + G T P R + PE + R
Sbjct: 179 FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR---WMPPESILYR 235
Query: 519 KVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMR 577
K T +SDV+SFGV+L E+ T GK P W Q E EL R
Sbjct: 236 KFTTESDVWSFGVVLWEIFTYGKQP--------------WYQLSNTEAIDCITQGRELER 281
Query: 578 YHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEV 609
E+ +++ GC P QR ++++V
Sbjct: 282 PRACPPEVYAIMR---GCWQREPQQRHSIKDV 310
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 98/194 (50%), Gaps = 10/194 (5%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVG---KREFEMQMEVLGKIKHDNVVPLRAFY 410
LG G+ G +K + V+ ++L + + + + +++VL + +V +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 411 YSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVH 470
YS E + ++M GSL +L + +GR P ++ IA+ +GL +L KI+H
Sbjct: 74 YSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAV--IKGLTYLREKHKIMH 128
Query: 471 GNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVA--GYRAPEVVETRKVTFKSDVYS 528
++K SNIL+ + + DFG++ ++ + V Y +PE ++ + +SD++S
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWS 188
Query: 529 FGVLLLELLTGKAP 542
G+ L+E+ G+ P
Sbjct: 189 MGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 98/194 (50%), Gaps = 10/194 (5%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVG---KREFEMQMEVLGKIKHDNVVPLRAFY 410
LG G+ G +K + V+ ++L + + + + +++VL + +V +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 411 YSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVH 470
YS E + ++M GSL +L + +GR P ++ IA+ +GL +L KI+H
Sbjct: 74 YSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAV--IKGLTYLREKHKIMH 128
Query: 471 GNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVA--GYRAPEVVETRKVTFKSDVYS 528
++K SNIL+ + + DFG++ ++ + V Y +PE ++ + +SD++S
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWS 188
Query: 529 FGVLLLELLTGKAP 542
G+ L+E+ G+ P
Sbjct: 189 MGLSLVEMAVGRYP 202
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 114/258 (44%), Gaps = 48/258 (18%)
Query: 352 EVLGKGSVGTSYKAVL------EEGTTVVVKRLKEVAVG--KREFEMQMEVLGKIKHDNV 403
E LG+ G YK L E+ V +K LK+ A G + EF + + +++H NV
Sbjct: 15 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 74
Query: 404 VPLRAFYYSKDEKL-LVYDYMPAGSLSALL-----HGSRGSG------RTPLDWDNRMRI 451
V L +KD+ L +++ Y G L L H GS ++ L+ + + +
Sbjct: 75 VCLLGVV-TKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHL 133
Query: 452 ALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL---------NPLFGNTTP 502
A G+ +L S +VH ++ N+L+ + +SD GL L GN+
Sbjct: 134 VAQIAAGMEYLS-SHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLL 192
Query: 503 PTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGI--------- 552
P R + APE + K + SD++S+GV+L E+ + G P ++ +
Sbjct: 193 PIR---WMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVL 249
Query: 553 ----DLPRWVQSVVREEW 566
D P WV +++ E W
Sbjct: 250 PCPDDCPAWVYALMIECW 267
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 98/194 (50%), Gaps = 10/194 (5%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVG---KREFEMQMEVLGKIKHDNVVPLRAFY 410
LG G+ G +K + V+ ++L + + + + +++VL + +V +
Sbjct: 76 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 135
Query: 411 YSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVH 470
YS E + ++M GSL +L + +GR P ++ IA+ +GL +L KI+H
Sbjct: 136 YSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAV--IKGLTYLREKHKIMH 190
Query: 471 GNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVA--GYRAPEVVETRKVTFKSDVYS 528
++K SNIL+ + + DFG++ ++ + V Y +PE ++ + +SD++S
Sbjct: 191 RDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWS 250
Query: 529 FGVLLLELLTGKAP 542
G+ L+E+ G+ P
Sbjct: 251 MGLSLVEMAVGRYP 264
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 98/194 (50%), Gaps = 10/194 (5%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVG---KREFEMQMEVLGKIKHDNVVPLRAFY 410
LG G+ G +K + V+ ++L + + + + +++VL + +V +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 411 YSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVH 470
YS E + ++M GSL +L + +GR P ++ IA+ +GL +L KI+H
Sbjct: 74 YSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAV--IKGLTYLREKHKIMH 128
Query: 471 GNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVA--GYRAPEVVETRKVTFKSDVYS 528
++K SNIL+ + + DFG++ ++ + V Y +PE ++ + +SD++S
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWS 188
Query: 529 FGVLLLELLTGKAP 542
G+ L+E+ G+ P
Sbjct: 189 MGLSLVEMAVGRYP 202
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 116/272 (42%), Gaps = 42/272 (15%)
Query: 368 EEGTTVVVKRLKEVAVGK--REFEMQMEVLGKI-KHDNVVPLRAFYYSKDEKLLVYDYMP 424
+E TV VK LK+ A K + +ME++ I KH N++ L ++ +Y
Sbjct: 54 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 113
Query: 425 AGSLSALLHGSRGSG--------RTP---LDWDNRMRIALSAARGLAHLHVSGKIVHGNI 473
G+L L R G R P + + + + ARG+ +L S K +H ++
Sbjct: 114 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL-ASQKCIHRDL 172
Query: 474 KASNILLRPDHDACVSDFGLN------PLFGNTTPPTRVAGYRAPEVVETRKVTFKSDVY 527
A N+L+ ++ ++DFGL + TT + APE + R T +SDV+
Sbjct: 173 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 232
Query: 528 SFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMV 586
SFGVL+ E+ T G +P EE L + E R
Sbjct: 233 SFGVLMWEIFTLGGSPYPGIPVEELFKLLK-----------------EGHRMDKPANCTN 275
Query: 587 QLLQIAMGCVSTVPDQRPAMQEVVRMIENMNR 618
+L + C VP QRP +++V E+++R
Sbjct: 276 ELYMMMRDCWHAVPSQRPTFKQLV---EDLDR 304
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 116/272 (42%), Gaps = 42/272 (15%)
Query: 368 EEGTTVVVKRLKEVAVGK--REFEMQMEVLGKI-KHDNVVPLRAFYYSKDEKLLVYDYMP 424
+E TV VK LK+ A K + +ME++ I KH N++ L ++ +Y
Sbjct: 52 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 111
Query: 425 AGSLSALLHGSRGSG--------RTP---LDWDNRMRIALSAARGLAHLHVSGKIVHGNI 473
G+L L R G R P + + + + ARG+ +L S K +H ++
Sbjct: 112 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL-ASQKCIHRDL 170
Query: 474 KASNILLRPDHDACVSDFGLN------PLFGNTTPPTRVAGYRAPEVVETRKVTFKSDVY 527
A N+L+ ++ ++DFGL + TT + APE + R T +SDV+
Sbjct: 171 TARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 230
Query: 528 SFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMV 586
SFGVL+ E+ T G +P EE L + E R
Sbjct: 231 SFGVLMWEIFTLGGSPYPGIPVEELFKLLK-----------------EGHRMDKPANCTN 273
Query: 587 QLLQIAMGCVSTVPDQRPAMQEVVRMIENMNR 618
+L + C VP QRP +++V E+++R
Sbjct: 274 ELYMMMRDCWHAVPSQRPTFKQLV---EDLDR 302
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 98/194 (50%), Gaps = 10/194 (5%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVG---KREFEMQMEVLGKIKHDNVVPLRAFY 410
LG G+ G +K + V+ ++L + + + + +++VL + +V +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 411 YSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVH 470
YS E + ++M GSL +L + +GR P ++ IA+ +GL +L KI+H
Sbjct: 74 YSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAV--IKGLTYLREKHKIMH 128
Query: 471 GNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVA--GYRAPEVVETRKVTFKSDVYS 528
++K SNIL+ + + DFG++ ++ + V Y +PE ++ + +SD++S
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWS 188
Query: 529 FGVLLLELLTGKAP 542
G+ L+E+ G+ P
Sbjct: 189 MGLSLVEMAVGRYP 202
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 122/297 (41%), Gaps = 56/297 (18%)
Query: 354 LGKGSVGTSYKAVLEEG-----------TTVVVKRLKEVAVGKREFEM--QMEVLGKI-K 399
LG+G+ G + VL E T V VK LK A K ++ +ME++ I K
Sbjct: 25 LGEGAFG---QVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 81
Query: 400 HDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSG-----------RTPLDWDNR 448
H N++ L ++ +Y G+L L R G L +
Sbjct: 82 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 141
Query: 449 MRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLN------PLFGNTTP 502
+ A ARG+ +L S K +H ++ A N+L+ D+ ++DFGL + TT
Sbjct: 142 VSCAYQVARGMEYL-ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 200
Query: 503 PTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSV 561
+ APE + R T +SDV+SFGVLL E+ T G +P EE L +
Sbjct: 201 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK----- 255
Query: 562 VREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNR 618
E R +L + C VP QRP +++V E+++R
Sbjct: 256 ------------EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV---EDLDR 297
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 129/291 (44%), Gaps = 43/291 (14%)
Query: 349 ASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGK--REFEMQMEVLGKI-KHDNVVP 405
A +V+ +VG K +E TV VK LK+ A K + +ME++ I KH N++
Sbjct: 47 AFGQVVMAEAVGID-KDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIH 105
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSG--------RTP---LDWDNRMRIALS 454
L ++ +Y G+L L R G R P + + + +
Sbjct: 106 LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQ 165
Query: 455 AARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLN------PLFGNTTPPTRVAG 508
ARG+ +L S K +H ++ A N+L+ ++ ++DFGL + TT
Sbjct: 166 LARGMEYL-ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK 224
Query: 509 YRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWT 567
+ APE + R T +SDV+SFGVL+ E+ T G +P EE L ++ R +
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL---LKEGHRMDKP 281
Query: 568 AEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNR 618
A N E+ +++ C VP QRP +++V E+++R
Sbjct: 282 A-----------NCTNELYMMMR---DCWHAVPSQRPTFKQLV---EDLDR 315
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 100/210 (47%), Gaps = 33/210 (15%)
Query: 352 EVLGKGSVGTSYKA-VLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFY 410
EV +G G +KA +L E V + +++ + E+E+ L +KH+N++
Sbjct: 30 EVKARGRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNEYEVY--SLPGMKHENILQFIGAE 87
Query: 411 Y---SKDEKL-LVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLH--V 464
S D L L+ + GSLS L + + W+ IA + ARGLA+LH +
Sbjct: 88 KRGTSVDVDLWLITAFHEKGSLSDFLKAN------VVSWNELCHIAETMARGLAYLHEDI 141
Query: 465 SG-------KIVHGNIKASNILLRPDHDACVSDFGLNPLF------GNTTPPTRVAGYRA 511
G I H +IK+ N+LL+ + AC++DFGL F G+T Y A
Sbjct: 142 PGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMA 201
Query: 512 PEVVE-----TRKVTFKSDVYSFGVLLLEL 536
PEV+E R + D+Y+ G++L EL
Sbjct: 202 PEVLEGAINFQRDAFLRIDMYAMGLVLWEL 231
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 124/291 (42%), Gaps = 43/291 (14%)
Query: 349 ASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGK--REFEMQMEVLGKI-KHDNVVP 405
A +V+ +VG K +E TV VK LK+ A K + +ME++ I KH N++
Sbjct: 47 AFGQVVMAEAVGID-KDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIN 105
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSG--------RTP---LDWDNRMRIALS 454
L ++ +Y G+L L R G R P + + + +
Sbjct: 106 LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQ 165
Query: 455 AARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN------TTPPTRVAG 508
ARG+ +L S K +H ++ A N+L+ ++ ++DFGL N TT
Sbjct: 166 LARGMEYL-ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVK 224
Query: 509 YRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWT 567
+ APE + R T +SDV+SFGVL+ E+ T G +P EE L +
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK----------- 273
Query: 568 AEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNR 618
E R +L + C VP QRP +++V E+++R
Sbjct: 274 ------EGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV---EDLDR 315
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 93/200 (46%), Gaps = 20/200 (10%)
Query: 354 LGKGSVGTSYKAVLEE-----GTTVVVKRLKEVAVGK-REFEMQMEVLGKIKHDNVVPLR 407
LGKG+ G+ + G V VK+L+ + R+F+ ++++L + D +V R
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 408 AFYYS--KDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
Y + E LV +Y+P+G L L R LD + + +G+ +L S
Sbjct: 75 GVSYGPGRPELRLVMEYLPSGCLRDFLQRHRAR----LDASRLLLYSSQICKGMEYLG-S 129
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLFG-------NTTPPTRVAGYRAPEVVETR 518
+ VH ++ A NIL+ + ++DFGL L P + APE +
Sbjct: 130 RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDN 189
Query: 519 KVTFKSDVYSFGVLLLELLT 538
+ +SDV+SFGV+L EL T
Sbjct: 190 IFSRQSDVWSFGVVLYELFT 209
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 98/194 (50%), Gaps = 10/194 (5%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVG---KREFEMQMEVLGKIKHDNVVPLRAFY 410
LG G+ G +K + V+ ++L + + + + +++VL + +V +
Sbjct: 41 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 100
Query: 411 YSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVH 470
YS E + ++M GSL +L + +GR P ++ IA+ +GL +L KI+H
Sbjct: 101 YSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAV--IKGLTYLREKHKIMH 155
Query: 471 GNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVA--GYRAPEVVETRKVTFKSDVYS 528
++K SNIL+ + + DFG++ ++ + V Y +PE ++ + +SD++S
Sbjct: 156 RDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWS 215
Query: 529 FGVLLLELLTGKAP 542
G+ L+E+ G+ P
Sbjct: 216 MGLSLVEMAVGRYP 229
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 122/297 (41%), Gaps = 56/297 (18%)
Query: 354 LGKGSVGTSYKAVLEEG-----------TTVVVKRLKEVAVGKREFEM--QMEVLGKI-K 399
LG+G+ G + VL E T V VK LK A K ++ +ME++ I K
Sbjct: 21 LGEGAFG---QVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 77
Query: 400 HDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSG-----------RTPLDWDNR 448
H N++ L ++ +Y G+L L R G L +
Sbjct: 78 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 137
Query: 449 MRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLN------PLFGNTTP 502
+ A ARG+ +L S K +H ++ A N+L+ D+ ++DFGL + TT
Sbjct: 138 VSCAYQVARGMEYL-ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 196
Query: 503 PTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSV 561
+ APE + R T +SDV+SFGVLL E+ T G +P EE L +
Sbjct: 197 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK----- 251
Query: 562 VREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNR 618
E R +L + C VP QRP +++V E+++R
Sbjct: 252 ------------EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV---EDLDR 293
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 106/226 (46%), Gaps = 25/226 (11%)
Query: 334 FEGGVYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKR--EFEMQ 391
+E + ED E LG G+ G YKA +E + + ++ + + ++ ++
Sbjct: 26 YEHVTRDLNPEDFWEIIGE-LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVE 84
Query: 392 MEVLGKIKHDNVVPL-RAFYYSKDEKLLVYDYMPAGSLSA-LLHGSRGSGRTPLDWDNRM 449
+++L H N+V L AFYY + +L+ ++ G++ A +L R PL
Sbjct: 85 IDILASCDHPNIVKLLDAFYYENNLWILI-EFCAGGAVDAVMLELER-----PLTESQIQ 138
Query: 450 RIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTR---- 505
+ L +LH KI+H ++KA NIL D D ++DFG++ NT R
Sbjct: 139 VVCKQTLDALNYLH-DNKIIHRDLKAGNILFTLDGDIKLADFGVSA--KNTRXIQRRDXF 195
Query: 506 --VAGYRAPEVV-----ETRKVTFKSDVYSFGVLLLELLTGKAPNQ 544
+ APEVV + R +K+DV+S G+ L+E+ + P+
Sbjct: 196 IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHH 241
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 116/272 (42%), Gaps = 42/272 (15%)
Query: 368 EEGTTVVVKRLKEVAVGK--REFEMQMEVLGKI-KHDNVVPLRAFYYSKDEKLLVYDYMP 424
+E TV VK LK+ A K + +ME++ I KH N++ L ++ +Y
Sbjct: 57 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 116
Query: 425 AGSLSALLHGSRGSG--------RTP---LDWDNRMRIALSAARGLAHLHVSGKIVHGNI 473
G+L L R G R P + + + + ARG+ +L S K +H ++
Sbjct: 117 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL-ASQKCIHRDL 175
Query: 474 KASNILLRPDHDACVSDFGLN------PLFGNTTPPTRVAGYRAPEVVETRKVTFKSDVY 527
A N+L+ ++ ++DFGL + TT + APE + R T +SDV+
Sbjct: 176 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 235
Query: 528 SFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMV 586
SFGVL+ E+ T G +P EE L + E R
Sbjct: 236 SFGVLMWEIFTLGGSPYPGIPVEELFKLLK-----------------EGHRMDKPANCTN 278
Query: 587 QLLQIAMGCVSTVPDQRPAMQEVVRMIENMNR 618
+L + C VP QRP +++V E+++R
Sbjct: 279 ELYMMMRDCWHAVPSQRPTFKQLV---EDLDR 307
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 122/297 (41%), Gaps = 56/297 (18%)
Query: 354 LGKGSVGTSYKAVLEEG-----------TTVVVKRLKEVAVGKREFEM--QMEVLGKI-K 399
LG+G+ G + VL E T V VK LK A K ++ +ME++ I K
Sbjct: 28 LGEGAFG---QVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 84
Query: 400 HDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSG-----------RTPLDWDNR 448
H N++ L ++ +Y G+L L R G L +
Sbjct: 85 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 144
Query: 449 MRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLN------PLFGNTTP 502
+ A ARG+ +L S K +H ++ A N+L+ D+ ++DFGL + TT
Sbjct: 145 VSCAYQVARGMEYL-ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 203
Query: 503 PTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSV 561
+ APE + R T +SDV+SFGVLL E+ T G +P EE L +
Sbjct: 204 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK----- 258
Query: 562 VREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNR 618
E R +L + C VP QRP +++V E+++R
Sbjct: 259 ------------EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV---EDLDR 300
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 116/272 (42%), Gaps = 42/272 (15%)
Query: 368 EEGTTVVVKRLKEVAVGK--REFEMQMEVLGKI-KHDNVVPLRAFYYSKDEKLLVYDYMP 424
+E TV VK LK+ A K + +ME++ I KH N++ L ++ +Y
Sbjct: 111 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 170
Query: 425 AGSLSALLHGSRGSG--------RTP---LDWDNRMRIALSAARGLAHLHVSGKIVHGNI 473
G+L L R G R P + + + + ARG+ +L S K +H ++
Sbjct: 171 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL-ASQKCIHRDL 229
Query: 474 KASNILLRPDHDACVSDFGLN------PLFGNTTPPTRVAGYRAPEVVETRKVTFKSDVY 527
A N+L+ ++ ++DFGL + TT + APE + R T +SDV+
Sbjct: 230 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 289
Query: 528 SFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMV 586
SFGVL+ E+ T G +P EE L + E R
Sbjct: 290 SFGVLMWEIFTLGGSPYPGIPVEELFKLLK-----------------EGHRMDKPANCTN 332
Query: 587 QLLQIAMGCVSTVPDQRPAMQEVVRMIENMNR 618
+L + C VP QRP +++V E+++R
Sbjct: 333 ELYMMMRDCWHAVPSQRPTFKQLV---EDLDR 361
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 98/194 (50%), Gaps = 10/194 (5%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVG---KREFEMQMEVLGKIKHDNVVPLRAFY 410
LG G+ G +K + V+ ++L + + + + +++VL + +V +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 411 YSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVH 470
YS E + ++M GSL +L + +GR P ++ IA+ +GL +L KI+H
Sbjct: 74 YSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAV--IKGLTYLREKHKIMH 128
Query: 471 GNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVA--GYRAPEVVETRKVTFKSDVYS 528
++K SNIL+ + + DFG++ ++ + V Y +PE ++ + +SD++S
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWS 188
Query: 529 FGVLLLELLTGKAP 542
G+ L+E+ G+ P
Sbjct: 189 MGLSLVEMAVGRYP 202
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 125/297 (42%), Gaps = 56/297 (18%)
Query: 354 LGKGSVGTSYKAVLEEG-----------TTVVVKRLKEVAVGKREFEM--QMEVLGKI-K 399
LG+G+ G + VL E T V VK LK A K ++ +ME++ I K
Sbjct: 36 LGEGAFG---QVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 400 HDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSG-----------RTPLDWDNR 448
H N++ L ++ +Y G+L L R G L +
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 152
Query: 449 MRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLN------PLFGNTTP 502
+ A ARG+ +L S K +H ++ A N+L+ D+ ++DFGL + TT
Sbjct: 153 VSCAYQVARGMEYL-ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 503 PTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSV 561
+ APE + R T +SDV+SFGVLL E+ T G +P EE L + +
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRM 271
Query: 562 VREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNR 618
+ N E+ +++ C VP QRP +++V E+++R
Sbjct: 272 DKPS--------------NCTNELYMMMR---DCWHAVPSQRPTFKQLV---EDLDR 308
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 124/291 (42%), Gaps = 43/291 (14%)
Query: 349 ASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGK--REFEMQMEVLGKI-KHDNVVP 405
A +V+ +VG K +E TV VK LK+ A K + +ME++ I KH N++
Sbjct: 47 AFGQVVMAEAVGID-KDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIN 105
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSG--------RTP---LDWDNRMRIALS 454
L ++ +Y G+L L R G R P + + + +
Sbjct: 106 LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQ 165
Query: 455 AARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLN------PLFGNTTPPTRVAG 508
ARG+ +L S K +H ++ A N+L+ ++ ++DFGL + TT
Sbjct: 166 LARGMEYL-ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVK 224
Query: 509 YRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWT 567
+ APE + R T +SDV+SFGVL+ E+ T G +P EE L +
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK----------- 273
Query: 568 AEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNR 618
E R +L + C VP QRP +++V E+++R
Sbjct: 274 ------EGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV---EDLDR 315
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKR--EFEMQMEVLGKIKHDNVVPL-RAFY 410
LG G+ G YKA +E + + ++ + + ++ +++++L H N+V L AFY
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 411 YSKDEKLLVYDYMPAGSLSA-LLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIV 469
Y + +L+ ++ G++ A +L R PL + L +LH KI+
Sbjct: 105 YENNLWILI-EFCAGGAVDAVMLELER-----PLTESQIQVVCKQTLDALNYLH-DNKII 157
Query: 470 HGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTR------VAGYRAPEVV-----ETR 518
H ++KA NIL D D ++DFG++ NT R + APEVV + R
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSA--KNTRTIQRRDSFIGTPYWMAPEVVMCETSKDR 215
Query: 519 KVTFKSDVYSFGVLLLELLTGKAPNQ 544
+K+DV+S G+ L+E+ + P+
Sbjct: 216 PYDYKADVWSLGITLIEMAEIEPPHH 241
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 21/207 (10%)
Query: 352 EVLGKGSVGT----SYKAVLEEGTTVVVKRLK--EVAVGKREFEMQMEVLGKIKHDNVVP 405
EV+G G G KA ++ + V +K LK +REF + ++G+ +H N++
Sbjct: 20 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIR 79
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
L + +++ ++M G+L + L + G T + +R S R LA +
Sbjct: 80 LEGVVTNSMPVMILTEFMENGALDSFLRLNDGQF-TVIQLVGMLRGIASGMRYLAEM--- 135
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLF-GNTTPPTRVAG--------YRAPEVVE 516
VH ++ A NIL+ + VSDFGL+ N++ PT + + APE +
Sbjct: 136 -SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIA 194
Query: 517 TRKVTFKSDVYSFGVLLLELLT-GKAP 542
RK T SD +S+G+++ E+++ G+ P
Sbjct: 195 FRKFTSASDAWSYGIVMWEVMSFGERP 221
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKR--EFEMQMEVLGKIKHDNVVPL-RAFY 410
LG G+ G YKA +E + + ++ + + ++ +++++L H N+V L AFY
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 411 YSKDEKLLVYDYMPAGSLSA-LLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIV 469
Y + +L+ ++ G++ A +L R PL + L +LH KI+
Sbjct: 105 YENNLWILI-EFCAGGAVDAVMLELER-----PLTESQIQVVCKQTLDALNYLH-DNKII 157
Query: 470 HGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTR------VAGYRAPEVV-----ETR 518
H ++KA NIL D D ++DFG++ NT R + APEVV + R
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSA--KNTRXIQRRDSFIGTPYWMAPEVVMCETSKDR 215
Query: 519 KVTFKSDVYSFGVLLLELLTGKAPNQ 544
+K+DV+S G+ L+E+ + P+
Sbjct: 216 PYDYKADVWSLGITLIEMAEIEPPHH 241
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 125/300 (41%), Gaps = 52/300 (17%)
Query: 351 AEVLGKGSVGTSYKAVLEE------GTTVVVKRLKEVAVGK--REFEMQMEVLGKIKHDN 402
+ LG+G G KA TTV VK LKE A R+ + VL ++ H +
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPH 87
Query: 403 VVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSG-------------------RTPL 443
V+ L LL+ +Y GSL L SR G L
Sbjct: 88 VIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147
Query: 444 DWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLN-PLFGNTTP 502
+ + A ++G+ +L K+VH ++ A NIL+ +SDFGL+ ++ +
Sbjct: 148 TMGDLISFAWQISQGMQYL-AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSX 206
Query: 503 PTRVAG-----YRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPR 556
R G + A E + T +SDV+SFGVLL E++T G P E +L
Sbjct: 207 VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNL-- 264
Query: 557 WVQSVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
+++ R E R N EEM +L+ + C PD+RP ++ + +E M
Sbjct: 265 -LKTGHRME-----------RPDNCSEEMYRLM---LQCWKQEPDKRPVFADISKDLEKM 309
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 122/297 (41%), Gaps = 56/297 (18%)
Query: 354 LGKGSVGTSYKAVLEEG-----------TTVVVKRLKEVAVGKREFEM--QMEVLGKI-K 399
LG+G+ G + VL E T V VK LK A K ++ +ME++ I K
Sbjct: 36 LGEGAFG---QVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 400 HDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSG-----------RTPLDWDNR 448
H N++ L ++ +Y G+L L R G L +
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 449 MRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLN------PLFGNTTP 502
+ A ARG+ +L S K +H ++ A N+L+ D+ ++DFGL + TT
Sbjct: 153 VSCAYQVARGMEYL-ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 503 PTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSV 561
+ APE + R T +SDV+SFGVLL E+ T G +P EE L +
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK----- 266
Query: 562 VREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNR 618
E R +L + C VP QRP +++V E+++R
Sbjct: 267 ------------EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV---EDLDR 308
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 122/257 (47%), Gaps = 54/257 (21%)
Query: 354 LGKGSVGTSYKA-VLEEGTTVVVKRL--------KEVAVGKREFEMQMEVLGKIKHDNVV 404
+GKG G +K ++++ + V +K L E+ +EF+ ++ ++ + H N+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 405 PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLH- 463
L ++ +V +++P G L L P+ W ++R+ L A G+ ++
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLYHRLLDKA----HPIKWSVKLRLMLDIALGIEYMQN 140
Query: 464 VSGKIVHGNIKASNILLRP-DHDA--C--VSDFGLNP--------LFGNTTPPTRVAGYR 510
+ IVH ++++ NI L+ D +A C V+DFGL+ L GN +
Sbjct: 141 QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQ-------WM 193
Query: 511 APEVV--ETRKVTFKSDVYSFGVLLLELLTGKAP-NQASLG---------EEGI------ 552
APE + E T K+D YSF ++L +LTG+ P ++ S G EEG+
Sbjct: 194 APETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPE 253
Query: 553 DLPRWVQSVVREEWTAE 569
D P +++V+ W+ +
Sbjct: 254 DCPPRLRNVIELCWSGD 270
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 124/291 (42%), Gaps = 43/291 (14%)
Query: 349 ASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGK--REFEMQMEVLGKI-KHDNVVP 405
A +V+ +VG K +E TV VK LK+ A K + +ME++ I KH N++
Sbjct: 47 AFGQVVMAEAVGID-KDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIN 105
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSG--------RTP---LDWDNRMRIALS 454
L ++ +Y G+L L R G R P + + + +
Sbjct: 106 LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQ 165
Query: 455 AARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN------TTPPTRVAG 508
ARG+ +L S K +H ++ A N+L+ ++ ++DFGL N TT
Sbjct: 166 LARGMEYL-ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVK 224
Query: 509 YRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWT 567
+ APE + R T +SDV+SFGVL+ E+ T G +P EE L +
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK----------- 273
Query: 568 AEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNR 618
E R +L + C VP QRP +++V E+++R
Sbjct: 274 ------EGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV---EDLDR 315
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 99/227 (43%), Gaps = 31/227 (13%)
Query: 354 LGKGSVGTSYKAVL------EEGTTVVVKRLKEVAVGKRE-FEMQMEVLGKIKHDNVVPL 406
LG+G+ G + A ++ V VK LKE + R+ F+ + E+L ++H ++V
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 407 RAFYYSKDEKLLVYDYMPAGSL----------SALLHGSRGSGRTPLDWDNRMRIALSAA 456
L+V++YM G L + LL G PL + +A A
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 457 RGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNP---------LFGNTTPPTRVA 507
G+ +L VH ++ N L+ + DFG++ + G T P R
Sbjct: 140 AGMVYL-AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR-- 196
Query: 508 GYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGID 553
+ PE + RK T +SDV+SFGV+L E+ T GK P E ID
Sbjct: 197 -WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAID 242
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 17/214 (7%)
Query: 352 EVLGKGSVGTSY--KAVL--EEGTTVVVKRLKEVAVGKRE---FEMQMEVLGKIKHDNVV 404
+VLG+GS G + + V + G +K LK+ + R+ +M+ ++L + H VV
Sbjct: 34 KVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVV 93
Query: 405 PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
L + ++ + L+ D++ G L +R S ++ A GL HLH
Sbjct: 94 KLHYAFQTEGKLYLILDFLRGGDLF-----TRLSKEVMFTEEDVKFYLAELALGLDHLHS 148
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGLNP-LFGNTTPPTRVAG---YRAPEVVETRKV 520
G I++ ++K NILL + ++DFGL+ + G Y APEVV +
Sbjct: 149 LG-IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGH 207
Query: 521 TFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDL 554
+ +D +S+GVL+ E+LTG P Q +E + L
Sbjct: 208 SHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTL 241
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 99/227 (43%), Gaps = 31/227 (13%)
Query: 354 LGKGSVGTSYKAVL------EEGTTVVVKRLKEVAVGKRE-FEMQMEVLGKIKHDNVVPL 406
LG+G+ G + A ++ V VK LKE + R+ F+ + E+L ++H ++V
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 407 RAFYYSKDEKLLVYDYMPAGSL----------SALLHGSRGSGRTPLDWDNRMRIALSAA 456
L+V++YM G L + LL G PL + +A A
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 457 RGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNP---------LFGNTTPPTRVA 507
G+ +L VH ++ N L+ + DFG++ + G T P R
Sbjct: 146 AGMVYL-AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR-- 202
Query: 508 GYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGID 553
+ PE + RK T +SDV+SFGV+L E+ T GK P E ID
Sbjct: 203 -WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAID 248
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 97/195 (49%), Gaps = 13/195 (6%)
Query: 354 LGKGSVGTSYKA-VLEEGTTVVVKRLKEVAVGKREFEM-QMEVLGKIKHDNVVPLRAFYY 411
+G+GS G A V G V VK++ +RE ++ ++ +H+NVV + Y
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 412 SKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHG 471
DE +V +++ G+L+ ++ +R ++ + + L+ + L+ LH G ++H
Sbjct: 99 VGDELWVVMEFLEGGALTDIVTHTR------MNEEQIAAVCLAVLQALSVLHAQG-VIHR 151
Query: 472 NIKASNILLRPDHDACVSDFGLNPLFGNTTPPTR----VAGYRAPEVVETRKVTFKSDVY 527
+IK+ +ILL D +SDFG P + + APE++ + D++
Sbjct: 152 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIW 211
Query: 528 SFGVLLLELLTGKAP 542
S G++++E++ G+ P
Sbjct: 212 SLGIMVIEMVDGEPP 226
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 122/297 (41%), Gaps = 56/297 (18%)
Query: 354 LGKGSVGTSYKAVLEEG-----------TTVVVKRLKEVAVGKREFEM--QMEVLGKI-K 399
LG+G+ G + VL E T V VK LK A K ++ +ME++ I K
Sbjct: 29 LGEGAFG---QVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 85
Query: 400 HDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSG-----------RTPLDWDNR 448
H N++ L ++ +Y G+L L R G L +
Sbjct: 86 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 145
Query: 449 MRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLN------PLFGNTTP 502
+ A ARG+ +L S K +H ++ A N+L+ D+ ++DFGL + TT
Sbjct: 146 VSCAYQVARGMEYL-ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 204
Query: 503 PTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSV 561
+ APE + R T +SDV+SFGVLL E+ T G +P EE L +
Sbjct: 205 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK----- 259
Query: 562 VREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNR 618
E R +L + C VP QRP +++V E+++R
Sbjct: 260 ------------EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV---EDLDR 301
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 97/195 (49%), Gaps = 13/195 (6%)
Query: 354 LGKGSVGTSYKA-VLEEGTTVVVKRLKEVAVGKREFEM-QMEVLGKIKHDNVVPLRAFYY 411
+G+GS G A V G V VK++ +RE ++ ++ +H+NVV + Y
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 412 SKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHG 471
DE +V +++ G+L+ ++ +R ++ + + L+ + L+ LH G ++H
Sbjct: 97 VGDELWVVMEFLEGGALTDIVTHTR------MNEEQIAAVCLAVLQALSVLHAQG-VIHR 149
Query: 472 NIKASNILLRPDHDACVSDFGLNPLFGNTTPPTR----VAGYRAPEVVETRKVTFKSDVY 527
+IK+ +ILL D +SDFG P + + APE++ + D++
Sbjct: 150 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIW 209
Query: 528 SFGVLLLELLTGKAP 542
S G++++E++ G+ P
Sbjct: 210 SLGIMVIEMVDGEPP 224
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 97/195 (49%), Gaps = 13/195 (6%)
Query: 354 LGKGSVGTSYKA-VLEEGTTVVVKRLKEVAVGKREFEM-QMEVLGKIKHDNVVPLRAFYY 411
+G+GS G A V G V VK++ +RE ++ ++ +H+NVV + Y
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 412 SKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHG 471
DE +V +++ G+L+ ++ +R ++ + + L+ + L+ LH G ++H
Sbjct: 219 VGDELWVVMEFLEGGALTDIVTHTR------MNEEQIAAVCLAVLQALSVLHAQG-VIHR 271
Query: 472 NIKASNILLRPDHDACVSDFGLNPLFGNTTPPTR----VAGYRAPEVVETRKVTFKSDVY 527
+IK+ +ILL D +SDFG P + + APE++ + D++
Sbjct: 272 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIW 331
Query: 528 SFGVLLLELLTGKAP 542
S G++++E++ G+ P
Sbjct: 332 SLGIMVIEMVDGEPP 346
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 97/195 (49%), Gaps = 13/195 (6%)
Query: 354 LGKGSVGTSYKA-VLEEGTTVVVKRLKEVAVGKREFEM-QMEVLGKIKHDNVVPLRAFYY 411
+G+GS G A V G V VK++ +RE ++ ++ +H+NVV + Y
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 412 SKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHG 471
DE +V +++ G+L+ ++ +R ++ + + L+ + L+ LH G ++H
Sbjct: 88 VGDELWVVMEFLEGGALTDIVTHTR------MNEEQIAAVCLAVLQALSVLHAQG-VIHR 140
Query: 472 NIKASNILLRPDHDACVSDFGLNPLFGNTTPPTR----VAGYRAPEVVETRKVTFKSDVY 527
+IK+ +ILL D +SDFG P + + APE++ + D++
Sbjct: 141 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIW 200
Query: 528 SFGVLLLELLTGKAP 542
S G++++E++ G+ P
Sbjct: 201 SLGIMVIEMVDGEPP 215
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 105/224 (46%), Gaps = 26/224 (11%)
Query: 353 VLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAVG-----KREFEMQMEVLGKIKHDNVVPL 406
V+G G G L+ G V +K + VG +R+F + ++G+ H NVV L
Sbjct: 50 VIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHL 109
Query: 407 RAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSG 466
++V ++M G+L A L G T + +R + R LA +
Sbjct: 110 EGVVTRGKPVMIVIEFMENGALDAFLRKHDGQ-FTVIQLVGMLRGIAAGMRYLADM---- 164
Query: 467 KIVHGNIKASNILLRPDHDACVSDFGL------NPLFGNTTPPTRV-AGYRAPEVVETRK 519
VH ++ A NIL+ + VSDFGL +P TT ++ + APE ++ RK
Sbjct: 165 GYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRK 224
Query: 520 VTFKSDVYSFGVLLLELLT-GKAP-----NQASLG--EEGIDLP 555
T SDV+S+G+++ E+++ G+ P NQ + EEG LP
Sbjct: 225 FTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLP 268
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 21/207 (10%)
Query: 352 EVLGKGSVGTSYKAVLEEG---TTVVVKRLKEVAV--GKREFEMQMEVLGKI-KHDNVVP 405
+V+G+G+ G KA +++ +KR+KE A R+F ++EVL K+ H N++
Sbjct: 28 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 87
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSR-----------GSGRTPLDWDNRMRIALS 454
L + L +Y P G+L L SR S + L + A
Sbjct: 88 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 147
Query: 455 AARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLN---PLFGNTTPPTRVAGYRA 511
ARG+ +L + +H N+ A NIL+ ++ A ++DFGL+ ++ T + A
Sbjct: 148 VARGMDYLS-QKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMA 206
Query: 512 PEVVETRKVTFKSDVYSFGVLLLELLT 538
E + T SDV+S+GVLL E+++
Sbjct: 207 IESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 125/300 (41%), Gaps = 52/300 (17%)
Query: 351 AEVLGKGSVGTSYKAVLEE------GTTVVVKRLKEVAVGK--REFEMQMEVLGKIKHDN 402
+ LG+G G KA TTV VK LKE A R+ + VL ++ H +
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPH 87
Query: 403 VVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSG-------------------RTPL 443
V+ L LL+ +Y GSL L SR G L
Sbjct: 88 VIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147
Query: 444 DWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLN-PLFGNTTP 502
+ + A ++G+ +L K+VH ++ A NIL+ +SDFGL+ ++ +
Sbjct: 148 TMGDLISFAWQISQGMQYL-AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSY 206
Query: 503 PTRVAG-----YRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPR 556
R G + A E + T +SDV+SFGVLL E++T G P E +L
Sbjct: 207 VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNL-- 264
Query: 557 WVQSVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
+++ R E R N EEM +L+ + C PD+RP ++ + +E M
Sbjct: 265 -LKTGHRME-----------RPDNCSEEMYRLM---LQCWKQEPDKRPVFADISKDLEKM 309
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 99/207 (47%), Gaps = 21/207 (10%)
Query: 352 EVLGKGSVGTSYKAVLE----EGTTVVVKRLKEVAVGK--REFEMQMEVLGKIKHDNVVP 405
+V+G G G L+ V +K LK K R+F + ++G+ H NV+
Sbjct: 39 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 98
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
L +++ ++M GSL + L + G T + +R + + LA ++
Sbjct: 99 LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ-FTVIQLVGMLRGIAAGMKYLADMNY- 156
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLF-GNTTPPTRVAG--------YRAPEVVE 516
VH ++ A NIL+ + VSDFGL+ +T+ PT + + APE ++
Sbjct: 157 ---VHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQ 213
Query: 517 TRKVTFKSDVYSFGVLLLELLT-GKAP 542
RK T SDV+S+G+++ E+++ G+ P
Sbjct: 214 YRKFTSASDVWSYGIVMWEVMSYGERP 240
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 97/195 (49%), Gaps = 13/195 (6%)
Query: 354 LGKGSVGTSYKA-VLEEGTTVVVKRLKEVAVGKREFEM-QMEVLGKIKHDNVVPLRAFYY 411
+G+GS G A V G V VK++ +RE ++ ++ +H+NVV + Y
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 412 SKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHG 471
DE +V +++ G+L+ ++ +R ++ + + L+ + L+ LH G ++H
Sbjct: 92 VGDELWVVMEFLEGGALTDIVTHTR------MNEEQIAAVCLAVLQALSVLHAQG-VIHR 144
Query: 472 NIKASNILLRPDHDACVSDFGLNPLFGNTTPPTR----VAGYRAPEVVETRKVTFKSDVY 527
+IK+ +ILL D +SDFG P + + APE++ + D++
Sbjct: 145 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIW 204
Query: 528 SFGVLLLELLTGKAP 542
S G++++E++ G+ P
Sbjct: 205 SLGIMVIEMVDGEPP 219
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 97/195 (49%), Gaps = 13/195 (6%)
Query: 354 LGKGSVGTSYKA-VLEEGTTVVVKRLKEVAVGKREFEM-QMEVLGKIKHDNVVPLRAFYY 411
+G+GS G A V G V VK++ +RE ++ ++ +H+NVV + Y
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 412 SKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHG 471
DE +V +++ G+L+ ++ +R ++ + + L+ + L+ LH G ++H
Sbjct: 142 VGDELWVVMEFLEGGALTDIVTHTR------MNEEQIAAVCLAVLQALSVLHAQG-VIHR 194
Query: 472 NIKASNILLRPDHDACVSDFGLNPLFGNTTPPTR----VAGYRAPEVVETRKVTFKSDVY 527
+IK+ +ILL D +SDFG P + + APE++ + D++
Sbjct: 195 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIW 254
Query: 528 SFGVLLLELLTGKAP 542
S G++++E++ G+ P
Sbjct: 255 SLGIMVIEMVDGEPP 269
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 94/205 (45%), Gaps = 15/205 (7%)
Query: 354 LGKGSVGTSYKAVLEE-----GTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRA 408
LGKG G Y A + V+ K E A + + ++E+ ++H N++ L
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 409 FYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKI 468
+++ L+ +Y P G++ L + D A L++ H S ++
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKL-----SRFDEQRTATYITELANALSYCH-SKRV 133
Query: 469 VHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG---YRAPEVVETRKVTFKSD 525
+H +IK N+LL + + ++DFG + + ++ T + G Y PE++E R K D
Sbjct: 134 IHRDIKPENLLLGSNGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 192
Query: 526 VYSFGVLLLELLTGKAPNQASLGEE 550
++S GVL E L G P +A +E
Sbjct: 193 LWSLGVLCYEFLVGMPPFEAHTYQE 217
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 118/290 (40%), Gaps = 37/290 (12%)
Query: 335 EGGVYSFDLEDLLRASAEVLGKGSVGTSYKAV-LEEGTTVVVKRLKEV-AVGKREFEMQM 392
E + +D E VLGKG+ G Y L + +K + E + + ++
Sbjct: 11 ESDLLEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEI 70
Query: 393 EVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIA 452
+ +KH N+V + + + +P GSLSALL G PL DN I
Sbjct: 71 ALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWG----PLK-DNEQTIG 125
Query: 453 LSAAR---GLAHLHVSGKIVHGNIKASNILLRPDHDAC-VSDFGLNPLFGNTTPPTR--- 505
+ GL +LH +IVH +IK N+L+ +SDFG + P T
Sbjct: 126 FYTKQILEGLKYLH-DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT 184
Query: 506 -VAGYRAPEVVET--RKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVV 562
Y APE+++ R +D++S G ++E+ TGK P LGE
Sbjct: 185 GTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF-YELGEP------------ 231
Query: 563 REEWTAEVFDVELMRYH-NIEEEM-VQLLQIAMGCVSTVPDQRPAMQEVV 610
A +F V + + H I E M + + C PD+R +++
Sbjct: 232 ----QAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLL 277
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 86/188 (45%), Gaps = 20/188 (10%)
Query: 370 GTTVVVKRLKEVAVG---KREFEMQMEVLGKIKHDNVVPLRAFYYSKDEK--LLVYDYMP 424
G V VK LKE G + ++ ++E+L + H+++V + + EK LV +Y+P
Sbjct: 38 GEMVAVKALKE-GCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVP 96
Query: 425 AGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDH 484
GSL L R + + A G+A+LH +H + A N+LL D
Sbjct: 97 LGSLRDYL------PRHCVGLAQLLLFAQQICEGMAYLHAQ-HYIHRALAARNVLLDNDR 149
Query: 485 DACVSDFGLNPLFGNTTPPTRV-------AGYRAPEVVETRKVTFKSDVYSFGVLLLELL 537
+ DFGL RV + APE ++ K + SDV+SFGV L ELL
Sbjct: 150 LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELL 209
Query: 538 TGKAPNQA 545
T NQ+
Sbjct: 210 TYCDSNQS 217
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 86/180 (47%), Gaps = 16/180 (8%)
Query: 370 GTTVVVKRLKEVAVGKR--EFEMQMEVLGKIKHDNVVPLRAFYYSK--DEKLLVYDYMPA 425
G V VK LK + G + + ++E+L + H+N+V + + L+ +++P+
Sbjct: 50 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 109
Query: 426 GSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHD 485
GSL L ++ ++ +++ A+ +G+ +L S + VH ++ A N+L+ +H
Sbjct: 110 GSLKEYLPKNKNK----INLKQQLKYAVQICKGMDYLG-SRQYVHRDLAARNVLVESEHQ 164
Query: 486 ACVSDFGLNPLFGNTTPPTRVAGYR-------APEVVETRKVTFKSDVYSFGVLLLELLT 538
+ DFGL V R APE + K SDV+SFGV L ELLT
Sbjct: 165 VKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 95/200 (47%), Gaps = 20/200 (10%)
Query: 354 LGKGSVGT----SYKAVLEE-GTTVVVKRLKEVAVGK-REFEMQMEVLGKIKHDNVVPLR 407
LGKG+ G+ Y + + G V VK+L+ + R+F+ ++++L + D +V R
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 408 AFYYS--KDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
Y + LV +Y+P+G L L R LD + + +G+ +L S
Sbjct: 78 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR----LDASRLLLYSSQICKGMEYLG-S 132
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPL-------FGNTTPPTRVAGYRAPEVVETR 518
+ VH ++ A NIL+ + ++DFGL L + P + APE +
Sbjct: 133 RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDN 192
Query: 519 KVTFKSDVYSFGVLLLELLT 538
+ +SDV+SFGV+L EL T
Sbjct: 193 IFSRQSDVWSFGVVLYELFT 212
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 128/274 (46%), Gaps = 27/274 (9%)
Query: 354 LGKGSVGTSYKA-VLEEGTTVVVKRLKEV----AVGKREFEMQMEVLGKIKHDNVVPLRA 408
+G+G Y+A L +G V +K+++ A + + ++++L ++ H NV+ A
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYA 99
Query: 409 FYYSKDEKLLVYDYMPAGSLSALL-HGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGK 467
+ +E +V + AG LS ++ H + P + + L +A L H+H S +
Sbjct: 100 SFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSA--LEHMH-SRR 156
Query: 468 IVHGNIKASNILLRPDHDACVSDFGLNPLFGN-TTPPTRVAG---YRAPEVVETRKVTFK 523
++H +IK +N+ + + D GL F + TT + G Y +PE + FK
Sbjct: 157 VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFK 216
Query: 524 SDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEE 583
SD++S G LL E+ A Q+ + ++L + + E D + + E
Sbjct: 217 SDIWSLGCLLYEM----AALQSPFYGDKMNLYSLCKKI-------EQCDYPPLPSDHYSE 265
Query: 584 EMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMN 617
E+ QL+ + C++ P++RP + V + + M+
Sbjct: 266 ELRQLVNM---CINPDPEKRPDVTYVYDVAKRMH 296
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 95/200 (47%), Gaps = 20/200 (10%)
Query: 354 LGKGSVGT----SYKAVLEE-GTTVVVKRLKEVAVGK-REFEMQMEVLGKIKHDNVVPLR 407
LGKG+ G+ Y + + G V VK+L+ + R+F+ ++++L + D +V R
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 408 AFYYS--KDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
Y + LV +Y+P+G L L R LD + + +G+ +L S
Sbjct: 79 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR----LDASRLLLYSSQICKGMEYLG-S 133
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPL-------FGNTTPPTRVAGYRAPEVVETR 518
+ VH ++ A NIL+ + ++DFGL L + P + APE +
Sbjct: 134 RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDN 193
Query: 519 KVTFKSDVYSFGVLLLELLT 538
+ +SDV+SFGV+L EL T
Sbjct: 194 IFSRQSDVWSFGVVLYELFT 213
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 93/200 (46%), Gaps = 20/200 (10%)
Query: 354 LGKGSVGTSYKAVLE-----EGTTVVVKRLKEVAVGK-REFEMQMEVLGKIKHDNVVPLR 407
LGKG+ G+ + G V VK+L+ + R+F+ ++++L + D +V R
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 408 AFYYS--KDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
Y + LV +Y+P+G L L R LD + + +G+ +L S
Sbjct: 91 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR----LDASRLLLYSSQICKGMEYLG-S 145
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPL-------FGNTTPPTRVAGYRAPEVVETR 518
+ VH ++ A NIL+ + ++DFGL L + P + APE +
Sbjct: 146 RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDN 205
Query: 519 KVTFKSDVYSFGVLLLELLT 538
+ +SDV+SFGV+L EL T
Sbjct: 206 IFSRQSDVWSFGVVLYELFT 225
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 85/180 (47%), Gaps = 16/180 (8%)
Query: 370 GTTVVVKRLKEVAVGKR--EFEMQMEVLGKIKHDNVVPLRAFYYSK--DEKLLVYDYMPA 425
G V VK LK + G + + ++E+L + H+N+V + + L+ +++P+
Sbjct: 38 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 97
Query: 426 GSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHD 485
GSL L + ++ +++ A+ +G+ +L S + VH ++ A N+L+ +H
Sbjct: 98 GSLKEYL----PKNKNKINLKQQLKYAVQICKGMDYLG-SRQYVHRDLAARNVLVESEHQ 152
Query: 486 ACVSDFGLNPLFGNTTPPTRVAGYR-------APEVVETRKVTFKSDVYSFGVLLLELLT 538
+ DFGL V R APE + K SDV+SFGV L ELLT
Sbjct: 153 VKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 123/291 (42%), Gaps = 43/291 (14%)
Query: 349 ASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGK--REFEMQMEVLGKI-KHDNVVP 405
A +V+ +VG K +E TV VK LK+ A K + +ME++ I KH N++
Sbjct: 47 AFGQVVMAEAVGID-KDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIN 105
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSG--------RTP---LDWDNRMRIALS 454
L ++ Y G+L L R G R P + + + +
Sbjct: 106 LLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQ 165
Query: 455 AARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLN------PLFGNTTPPTRVAG 508
ARG+ +L S K +H ++ A N+L+ ++ ++DFGL + TT
Sbjct: 166 LARGMEYL-ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK 224
Query: 509 YRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWT 567
+ APE + R T +SDV+SFGVL+ E+ T G +P EE L +
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK----------- 273
Query: 568 AEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNR 618
E R +L + C VP QRP +++V E+++R
Sbjct: 274 ------EGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV---EDLDR 315
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 123/291 (42%), Gaps = 43/291 (14%)
Query: 349 ASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGK--REFEMQMEVLGKI-KHDNVVP 405
A +V+ +VG K +E TV VK LK+ A K + +ME++ I KH N++
Sbjct: 47 AFGQVVMAEAVGID-KDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIN 105
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSG--------RTP---LDWDNRMRIALS 454
L ++ Y G+L L R G R P + + + +
Sbjct: 106 LLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQ 165
Query: 455 AARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLN------PLFGNTTPPTRVAG 508
ARG+ +L S K +H ++ A N+L+ ++ ++DFGL + TT
Sbjct: 166 LARGMEYL-ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK 224
Query: 509 YRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWT 567
+ APE + R T +SDV+SFGVL+ E+ T G +P EE L +
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK----------- 273
Query: 568 AEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNR 618
E R +L + C VP QRP +++V E+++R
Sbjct: 274 ------EGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV---EDLDR 315
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 86/188 (45%), Gaps = 20/188 (10%)
Query: 370 GTTVVVKRLKEVAVG---KREFEMQMEVLGKIKHDNVVPLRAFYYSKDEK--LLVYDYMP 424
G V VK LKE G + ++ ++E+L + H+++V + + EK LV +Y+P
Sbjct: 37 GEMVAVKALKE-GCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVP 95
Query: 425 AGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDH 484
GSL L R + + A G+A+LH +H + A N+LL D
Sbjct: 96 LGSLRDYL------PRHCVGLAQLLLFAQQICEGMAYLHAQ-HYIHRALAARNVLLDNDR 148
Query: 485 DACVSDFGLNPLFGNTTPPTRV-------AGYRAPEVVETRKVTFKSDVYSFGVLLLELL 537
+ DFGL RV + APE ++ K + SDV+SFGV L ELL
Sbjct: 149 LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELL 208
Query: 538 TGKAPNQA 545
T NQ+
Sbjct: 209 TYCDSNQS 216
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 103/214 (48%), Gaps = 29/214 (13%)
Query: 352 EVLGKGSVGTSYKAV-LEEGTTV---VVKRLKEVAVGKREFEM---QMEVLGKIKHDNVV 404
+VLG G GT +K V + EG ++ V ++ E G++ F+ M +G + H ++V
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 405 PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGS--GRTPLDWDNRMRIALSAARGLAHL 462
L +L V Y+P GSL + RG+ + L+W + A+G+ +L
Sbjct: 97 RLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQLLLNW------GVQIAKGMYYL 149
Query: 463 HVSGKIVHGNIKASNILLRPDHDACVSDFG----LNP-----LFGNTTPPTRVAGYRAPE 513
G +VH N+ A N+LL+ V+DFG L P L+ P + + A E
Sbjct: 150 EEHG-MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIK---WMALE 205
Query: 514 VVETRKVTFKSDVYSFGVLLLELLTGKAPNQASL 547
+ K T +SDV+S+GV + EL+T A A L
Sbjct: 206 SIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGL 239
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 103/214 (48%), Gaps = 29/214 (13%)
Query: 352 EVLGKGSVGTSYKAV-LEEGTTV---VVKRLKEVAVGKREFEM---QMEVLGKIKHDNVV 404
+VLG G GT +K V + EG ++ V ++ E G++ F+ M +G + H ++V
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 405 PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGS--GRTPLDWDNRMRIALSAARGLAHL 462
L +L V Y+P GSL + RG+ + L+W + A+G+ +L
Sbjct: 79 RLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQLLLNW------GVQIAKGMYYL 131
Query: 463 HVSGKIVHGNIKASNILLRPDHDACVSDFG----LNP-----LFGNTTPPTRVAGYRAPE 513
G +VH N+ A N+LL+ V+DFG L P L+ P + + A E
Sbjct: 132 EEHG-MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIK---WMALE 187
Query: 514 VVETRKVTFKSDVYSFGVLLLELLTGKAPNQASL 547
+ K T +SDV+S+GV + EL+T A A L
Sbjct: 188 SIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGL 221
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 124/291 (42%), Gaps = 43/291 (14%)
Query: 349 ASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGK--REFEMQMEVLGKI-KHDNVVP 405
A +V+ +VG K +E TV VK LK+ A + + +ME++ I KH N++
Sbjct: 47 AFGQVVMAEAVGID-KDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIIN 105
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSG--------RTP---LDWDNRMRIALS 454
L ++ +Y G+L L R G R P + + + +
Sbjct: 106 LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQ 165
Query: 455 AARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLN------PLFGNTTPPTRVAG 508
ARG+ +L S K +H ++ A N+L+ ++ ++DFGL + TT
Sbjct: 166 LARGMEYL-ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK 224
Query: 509 YRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWT 567
+ APE + R T +SDV+SFGVL+ E+ T G +P EE L +
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK----------- 273
Query: 568 AEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNR 618
E R +L + C VP QRP +++V E+++R
Sbjct: 274 ------EGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV---EDLDR 315
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 21/208 (10%)
Query: 352 EVLGKGSVGTSYKAV-LEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHD-NVVPLRAF 409
E++G G+ G YK ++ G +K + + E + ++ +L K H N+
Sbjct: 30 ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGA 89
Query: 410 YYSK------DEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLH 463
+ K D+ LV ++ AGS++ L+ ++G+ L + I RGL+HLH
Sbjct: 90 FIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNT---LKEEWIAYICREILRGLSHLH 146
Query: 464 VSGKIVHGNIKASNILLRPDHDACVSDFG----LNPLFGNTTPPTRVAGYRAPEVVETRK 519
K++H +IK N+LL + + + DFG L+ G + APEV+ +
Sbjct: 147 -QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDE 205
Query: 520 -----VTFKSDVYSFGVLLLELLTGKAP 542
FKSD++S G+ +E+ G P
Sbjct: 206 NPDATYDFKSDLWSLGITAIEMAEGAPP 233
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 97/196 (49%), Gaps = 14/196 (7%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVG---KREFEMQMEVLGKIKHDNVVPLRAFY 410
LG G+ G +K + V+ ++L + + + + +++VL + +V +
Sbjct: 17 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 76
Query: 411 YSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVH 470
YS E + ++M GSL +L + +GR P ++ IA+ +GL +L KI+H
Sbjct: 77 YSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAV--IKGLTYLREKHKIMH 131
Query: 471 GNIKASNILLRPDHDACVSDFGLNPLF----GNTTPPTRVAGYRAPEVVETRKVTFKSDV 526
++K SNIL+ + + DFG++ N TR Y +PE ++ + +SD+
Sbjct: 132 RDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTR--SYMSPERLQGTHYSVQSDI 189
Query: 527 YSFGVLLLELLTGKAP 542
+S G+ L+E+ G+ P
Sbjct: 190 WSMGLSLVEMAVGRYP 205
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 98/207 (47%), Gaps = 21/207 (10%)
Query: 352 EVLGKGSVGTSYKAVLE----EGTTVVVKRLKEVAVGK--REFEMQMEVLGKIKHDNVVP 405
+V+G G G L+ V +K LK K R+F + ++G+ H NV+
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 72
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
L +++ ++M GSL + L + G T + +R + + LA ++
Sbjct: 73 LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ-FTVIQLVGMLRGIAAGMKYLADMNY- 130
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLF-GNTTPPTRVAG--------YRAPEVVE 516
VH + A NIL+ + VSDFGL+ +T+ PT + + APE ++
Sbjct: 131 ---VHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQ 187
Query: 517 TRKVTFKSDVYSFGVLLLELLT-GKAP 542
RK T SDV+S+G+++ E+++ G+ P
Sbjct: 188 YRKFTSASDVWSYGIVMWEVMSYGERP 214
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 94/206 (45%), Gaps = 20/206 (9%)
Query: 352 EVLGKGSVGTSYKAVL--EEGTTV--VVKRLKEVA-VGK-REFEMQMEVLGKIKHDNVVP 405
EV+G+G G Y L +G + VK L + +G+ +F + ++ H NV+
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 406 LRAFYY-SKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
L S+ L+V YM G L + R P D + L A+G+ +L
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTVKD-LIGFGLQVAKGMKYL-A 149
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGL--------NPLFGNTTPPTRVAGYRAPEVVE 516
S K VH ++ A N +L V+DFGL N T + A E ++
Sbjct: 150 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQ 209
Query: 517 TRKVTFKSDVYSFGVLLLELLTGKAP 542
T+K T KSDV+SFGVLL EL+T AP
Sbjct: 210 TQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 113/272 (41%), Gaps = 37/272 (13%)
Query: 353 VLGKGSVGTSYKAV-LEEGTTVVVKRLKEV-AVGKREFEMQMEVLGKIKHDNVVPLRAFY 410
VLGKG+ G Y L + +K + E + + ++ + +KH N+V +
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 411 YSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAAR---GLAHLHVSGK 467
+ + +P GSLSALL G PL DN I + GL +LH +
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSKWG----PLK-DNEQTIGFYTKQILEGLKYLH-DNQ 128
Query: 468 IVHGNIKASNILLRPDHDAC-VSDFGLNPLFGNTTPPTR----VAGYRAPEVVET--RKV 520
IVH +IK N+L+ +SDFG + P T Y APE+++ R
Sbjct: 129 IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGY 188
Query: 521 TFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYH- 579
+D++S G ++E+ TGK P LGE A +F V + + H
Sbjct: 189 GKAADIWSLGCTIIEMATGKPPFY-ELGEP----------------QAAMFKVGMFKVHP 231
Query: 580 NIEEEM-VQLLQIAMGCVSTVPDQRPAMQEVV 610
I E M + + C PD+R +++
Sbjct: 232 EIPESMSAEAKAFILKCFEPDPDKRACANDLL 263
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 121/297 (40%), Gaps = 56/297 (18%)
Query: 354 LGKGSVGTSYKAVLEEG-----------TTVVVKRLKEVAVGKREFEM--QMEVLGKI-K 399
LG+G+ G + VL E T V VK LK A K ++ +ME++ I K
Sbjct: 36 LGEGAFG---QVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 400 HDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSG-----------RTPLDWDNR 448
H N++ L ++ +Y G+L L R G L +
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDL 152
Query: 449 MRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLN------PLFGNTTP 502
+ A ARG+ +L S K +H ++ A N+L+ D+ ++DFGL TT
Sbjct: 153 VSCAYQVARGMEYL-ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTN 211
Query: 503 PTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSV 561
+ APE + R T +SDV+SFGVLL E+ T G +P EE L +
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK----- 266
Query: 562 VREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNR 618
E R +L + C VP QRP +++V E+++R
Sbjct: 267 ------------EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV---EDLDR 308
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 97/194 (50%), Gaps = 10/194 (5%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVG---KREFEMQMEVLGKIKHDNVVPLRAFY 410
LG G+ G K ++ ++L + + + + +++VL + +V +
Sbjct: 24 LGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 83
Query: 411 YSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVH 470
YS E + ++M GSL +L ++ R P + ++ IA+ RGLA+L +I+H
Sbjct: 84 YSDGEISICMEHMDGGSLDQVLKEAK---RIPEEILGKVSIAV--LRGLAYLREKHQIMH 138
Query: 471 GNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVA--GYRAPEVVETRKVTFKSDVYS 528
++K SNIL+ + + DFG++ ++ + V Y APE ++ + +SD++S
Sbjct: 139 RDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMAPERLQGTHYSVQSDIWS 198
Query: 529 FGVLLLELLTGKAP 542
G+ L+EL G+ P
Sbjct: 199 MGLSLVELAVGRYP 212
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 122/257 (47%), Gaps = 54/257 (21%)
Query: 354 LGKGSVGTSYKA-VLEEGTTVVVKRL--------KEVAVGKREFEMQMEVLGKIKHDNVV 404
+GKG G +K ++++ + V +K L E+ +EF+ ++ ++ + H N+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 405 PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLH- 463
L ++ +V +++P G L L P+ W ++R+ L A G+ ++
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLYHRLLDKA----HPIKWSVKLRLMLDIALGIEYMQN 140
Query: 464 VSGKIVHGNIKASNILLRP-DHDA--C--VSDFG--------LNPLFGNTTPPTRVAGYR 510
+ IVH ++++ NI L+ D +A C V+DFG ++ L GN +
Sbjct: 141 QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLLGNFQ-------WM 193
Query: 511 APEVV--ETRKVTFKSDVYSFGVLLLELLTGKAP-NQASLG---------EEGI------ 552
APE + E T K+D YSF ++L +LTG+ P ++ S G EEG+
Sbjct: 194 APETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPE 253
Query: 553 DLPRWVQSVVREEWTAE 569
D P +++V+ W+ +
Sbjct: 254 DCPPRLRNVIELCWSGD 270
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 100/207 (48%), Gaps = 20/207 (9%)
Query: 352 EVLGK-GSVGTSYKAVLEEGTTVVVKRLKEVAVGKR--EFEMQMEVLGKIKHDNVVPL-R 407
E++G+ G G YKA +E + + ++ + + ++ +++++L H N+V L
Sbjct: 15 EIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD 74
Query: 408 AFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGK 467
AFYY + +L+ ++ G++ A++ PL + L +LH K
Sbjct: 75 AFYYENNLWILI-EFCAGGAVDAVM----LELERPLTESQIQVVCKQTLDALNYLH-DNK 128
Query: 468 IVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTR-----VAGYRAPEVV-----ET 517
I+H ++KA NIL D D ++DFG++ T R + APEVV +
Sbjct: 129 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKD 188
Query: 518 RKVTFKSDVYSFGVLLLELLTGKAPNQ 544
R +K+DV+S G+ L+E+ + P+
Sbjct: 189 RPYDYKADVWSLGITLIEMAEIEPPHH 215
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 97/206 (47%), Gaps = 17/206 (8%)
Query: 352 EVLGKGSVGTSYKAVLEEGTTV----VVKRLKEVAVGKRE---FEMQMEVLGKIKHDNVV 404
+VLG+GS G + G+ +K LK+ + R+ +M+ ++L ++ H +V
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 405 PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
L + ++ + L+ D++ G L +R S ++ A L HLH
Sbjct: 90 KLHYAFQTEGKLYLILDFLRGGDLF-----TRLSKEVMFTEEDVKFYLAELALALDHLHS 144
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGLNPL-FGNTTPPTRVAG---YRAPEVVETRKV 520
G I++ ++K NILL + ++DFGL+ + G Y APEVV R
Sbjct: 145 LG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGH 203
Query: 521 TFKSDVYSFGVLLLELLTGKAPNQAS 546
T +D +SFGVL+ E+LTG P Q
Sbjct: 204 TQSADWWSFGVLMFEMLTGTLPFQGK 229
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 97/206 (47%), Gaps = 17/206 (8%)
Query: 352 EVLGKGSVGTSYKAVLEEGTTV----VVKRLKEVAVGKRE---FEMQMEVLGKIKHDNVV 404
+VLG+GS G + G+ +K LK+ + R+ +M+ ++L ++ H +V
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 405 PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
L + ++ + L+ D++ G L +R S ++ A L HLH
Sbjct: 90 KLHYAFQTEGKLYLILDFLRGGDLF-----TRLSKEVMFTEEDVKFYLAELALALDHLHS 144
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGLNPL-FGNTTPPTRVAG---YRAPEVVETRKV 520
G I++ ++K NILL + ++DFGL+ + G Y APEVV R
Sbjct: 145 LG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGH 203
Query: 521 TFKSDVYSFGVLLLELLTGKAPNQAS 546
T +D +SFGVL+ E+LTG P Q
Sbjct: 204 TQSADWWSFGVLMFEMLTGTLPFQGK 229
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 97/206 (47%), Gaps = 17/206 (8%)
Query: 352 EVLGKGSVGTSYKAVLEEGTTV----VVKRLKEVAVGKRE---FEMQMEVLGKIKHDNVV 404
+VLG+GS G + G+ +K LK+ + R+ +M+ ++L ++ H +V
Sbjct: 31 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 90
Query: 405 PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
L + ++ + L+ D++ G L +R S ++ A L HLH
Sbjct: 91 KLHYAFQTEGKLYLILDFLRGGDLF-----TRLSKEVMFTEEDVKFYLAELALALDHLHS 145
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGLNPL-FGNTTPPTRVAG---YRAPEVVETRKV 520
G I++ ++K NILL + ++DFGL+ + G Y APEVV R
Sbjct: 146 LG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGH 204
Query: 521 TFKSDVYSFGVLLLELLTGKAPNQAS 546
T +D +SFGVL+ E+LTG P Q
Sbjct: 205 TQSADWWSFGVLMFEMLTGTLPFQGK 230
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 123/280 (43%), Gaps = 34/280 (12%)
Query: 352 EVLGKGSVGTSYKAVLE----EGTTVVVKRLK--EVAVGKREFEMQMEVLGKIKHDNVVP 405
+V+G G G L+ + +V +K LK +R+F + ++G+ H N++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
L ++V +YM GSL + L + T + +R A G+ +L
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLR---GIASGMKYLSDM 166
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGL------NPLFGNTTPPTRV-AGYRAPEVVETR 518
G VH ++ A NIL+ + VSDFGL +P TT ++ + +PE + R
Sbjct: 167 G-FVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 519 KVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRY 578
K T SDV+S+G++L E++ S GE P W S + + D E R
Sbjct: 226 KFTSASDVWSYGIVLWEVM--------SYGER----PYWEMS---NQDVIKAVD-EGYRL 269
Query: 579 HNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNR 618
+ L Q+ + C + RP +++V +++ + R
Sbjct: 270 PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 96/206 (46%), Gaps = 20/206 (9%)
Query: 352 EVLGKGSVGTSYKAVL--EEGTTV--VVKRLKEVA-VGK-REFEMQMEVLGKIKHDNVVP 405
EV+G+G G Y L +G + VK L + +G+ +F + ++ H NV+
Sbjct: 54 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 113
Query: 406 LRAFYY-SKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
L S+ L+V YM G L + R P D + L A+G+ +L
Sbjct: 114 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTVKD-LIGFGLQVAKGMKYL-A 168
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGL-NPLFG-------NTTPPTRVAGYRAPEVVE 516
S K VH ++ A N +L V+DFGL ++ N T + A E ++
Sbjct: 169 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 228
Query: 517 TRKVTFKSDVYSFGVLLLELLTGKAP 542
T+K T KSDV+SFGVLL EL+T AP
Sbjct: 229 TQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 86/187 (45%), Gaps = 18/187 (9%)
Query: 370 GTTVVVKRLKEVAVGKRE--FEMQMEVLGKIKHDNVVPLRAFYYSKDEK--LLVYDYMPA 425
G V VK LK + ++ ++++L + H++++ + + EK LV +Y+P
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPL 102
Query: 426 GSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHD 485
GSL L R + + A G+A+LH S +H N+ A N+LL D
Sbjct: 103 GSLRDYL------PRHSIGLAQLLLFAQQICEGMAYLH-SQHYIHRNLAARNVLLDNDRL 155
Query: 486 ACVSDFGLNPLFGNTTPPTRV-------AGYRAPEVVETRKVTFKSDVYSFGVLLLELLT 538
+ DFGL RV + APE ++ K + SDV+SFGV L ELLT
Sbjct: 156 VKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
Query: 539 GKAPNQA 545
+Q+
Sbjct: 216 HCDSSQS 222
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 124/300 (41%), Gaps = 52/300 (17%)
Query: 351 AEVLGKGSVGTSYKAVLEE------GTTVVVKRLKEVAVGK--REFEMQMEVLGKIKHDN 402
+ LG+G G KA TTV VK LKE A R+ + VL ++ H +
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPH 87
Query: 403 VVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSG-------------------RTPL 443
V+ L LL+ +Y GSL L SR G L
Sbjct: 88 VIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147
Query: 444 DWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLN-PLFGNTTP 502
+ + A ++G+ +L +VH ++ A NIL+ +SDFGL+ ++ +
Sbjct: 148 TMGDLISFAWQISQGMQYL-AEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSX 206
Query: 503 PTRVAG-----YRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPR 556
R G + A E + T +SDV+SFGVLL E++T G P E +L
Sbjct: 207 VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNL-- 264
Query: 557 WVQSVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
+++ R E R N EEM +L+ + C PD+RP ++ + +E M
Sbjct: 265 -LKTGHRME-----------RPDNCSEEMYRLM---LQCWKQEPDKRPVFADISKDLEKM 309
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 21/208 (10%)
Query: 354 LGKGSVGTSYKAVLEE-----GTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRA 408
LGKG G Y A + V+ K E A + + ++E+ ++H N++ L
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 409 FYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKI 468
+++ L+ +Y P G++ L + D A L++ H S ++
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKL-----SRFDEQRTATYITELANALSYCH-SKRV 133
Query: 469 VHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTR------VAGYRAPEVVETRKVTF 522
+H +IK N+LL + + ++DFG + P +R Y PE++E R
Sbjct: 134 IHRDIKPENLLLGSNGELKIADFG----WSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDE 189
Query: 523 KSDVYSFGVLLLELLTGKAPNQASLGEE 550
K D++S GVL E L G P +A +E
Sbjct: 190 KVDLWSLGVLCYEFLVGMPPFEAHTYQE 217
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 99/207 (47%), Gaps = 21/207 (10%)
Query: 352 EVLGKGSVGTSYKAVLEEG---TTVVVKRLKEVAV--GKREFEMQMEVLGKI-KHDNVVP 405
+V+G+G+ G KA +++ +KR+KE A R+F ++EVL K+ H N++
Sbjct: 21 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 80
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSR-----------GSGRTPLDWDNRMRIALS 454
L + L +Y P G+L L SR S + L + A
Sbjct: 81 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 140
Query: 455 AARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLN---PLFGNTTPPTRVAGYRA 511
ARG+ +L + +H ++ A NIL+ ++ A ++DFGL+ ++ T + A
Sbjct: 141 VARGMDYLS-QKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMA 199
Query: 512 PEVVETRKVTFKSDVYSFGVLLLELLT 538
E + T SDV+S+GVLL E+++
Sbjct: 200 IESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 125/282 (44%), Gaps = 40/282 (14%)
Query: 353 VLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAVG-----KREFEMQMEVLGKIKHDNVVPL 406
V+G G G L+ G + +K + VG +R+F + ++G+ H N++ L
Sbjct: 29 VIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHL 88
Query: 407 RAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSG 466
++V +YM GSL L + G T + +R +SA G+ +L G
Sbjct: 89 EGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQ-FTVIQLVGMLR-GISA--GMKYLSDMG 144
Query: 467 KIVHGNIKASNILLRPDHDACVSDFGL------NPLFGNTTPPTRV-AGYRAPEVVETRK 519
VH ++ A NIL+ + VSDFGL +P TT ++ + APE + RK
Sbjct: 145 -YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRK 203
Query: 520 VTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWV---QSVVREEWTAEVFDVELM 576
T SDV+S+G+++ E++ S GE P W Q V++ E E
Sbjct: 204 FTSASDVWSYGIVMWEVV--------SYGER----PYWEMTNQDVIK---AVE----EGY 244
Query: 577 RYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNR 618
R + + L Q+ + C + RP E+V M++ + R
Sbjct: 245 RLPSPMDCPAALYQLMLDCWQKERNSRPKFDEIVNMLDKLIR 286
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 99/207 (47%), Gaps = 21/207 (10%)
Query: 352 EVLGKGSVGTSYKAVLEEG---TTVVVKRLKEVAV--GKREFEMQMEVLGKI-KHDNVVP 405
+V+G+G+ G KA +++ +KR+KE A R+F ++EVL K+ H N++
Sbjct: 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 90
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSR-----------GSGRTPLDWDNRMRIALS 454
L + L +Y P G+L L SR S + L + A
Sbjct: 91 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 150
Query: 455 AARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLN---PLFGNTTPPTRVAGYRA 511
ARG+ +L + +H ++ A NIL+ ++ A ++DFGL+ ++ T + A
Sbjct: 151 VARGMDYLS-QKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMA 209
Query: 512 PEVVETRKVTFKSDVYSFGVLLLELLT 538
E + T SDV+S+GVLL E+++
Sbjct: 210 IESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 96/206 (46%), Gaps = 20/206 (9%)
Query: 352 EVLGKGSVGTSYKAVL--EEGTTV--VVKRLKEVA-VGK-REFEMQMEVLGKIKHDNVVP 405
EV+G+G G Y L +G + VK L + +G+ +F + ++ H NV+
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 406 LRAFYY-SKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
L S+ L+V YM G L + R P D + L A+G+ +L
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTVKD-LIGFGLQVAKGMKYL-A 150
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGL-NPLFG-------NTTPPTRVAGYRAPEVVE 516
S K VH ++ A N +L V+DFGL ++ N T + A E ++
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 210
Query: 517 TRKVTFKSDVYSFGVLLLELLTGKAP 542
T+K T KSDV+SFGVLL EL+T AP
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 96/206 (46%), Gaps = 20/206 (9%)
Query: 352 EVLGKGSVGTSYKAVL--EEGTTV--VVKRLKEVA-VGK-REFEMQMEVLGKIKHDNVVP 405
EV+G+G G Y L +G + VK L + +G+ +F + ++ H NV+
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 406 LRAFYY-SKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
L S+ L+V YM G L + R P D + L A+G+ +L
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTVKD-LIGFGLQVAKGMKYL-A 148
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGL-NPLFG-------NTTPPTRVAGYRAPEVVE 516
S K VH ++ A N +L V+DFGL ++ N T + A E ++
Sbjct: 149 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 208
Query: 517 TRKVTFKSDVYSFGVLLLELLTGKAP 542
T+K T KSDV+SFGVLL EL+T AP
Sbjct: 209 TQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 121/297 (40%), Gaps = 56/297 (18%)
Query: 354 LGKGSVGTSYKAVLEEG-----------TTVVVKRLKEVAVGKREFEM--QMEVLGKI-K 399
LG+G+ G + VL E T V VK LK A K ++ +ME++ I K
Sbjct: 36 LGEGAFG---QVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 400 HDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSG-----------RTPLDWDNR 448
H N++ L ++ +Y G+L L G L +
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 449 MRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLN------PLFGNTTP 502
+ A ARG+ +L S K +H ++ A N+L+ D+ ++DFGL + TT
Sbjct: 153 VSCAYQVARGMEYL-ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 503 PTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSV 561
+ APE + R T +SDV+SFGVLL E+ T G +P EE L +
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK----- 266
Query: 562 VREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNR 618
E R +L + C VP QRP +++V E+++R
Sbjct: 267 ------------EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV---EDLDR 308
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 96/206 (46%), Gaps = 20/206 (9%)
Query: 352 EVLGKGSVGTSYKAVL--EEGTTV--VVKRLKEVA-VGK-REFEMQMEVLGKIKHDNVVP 405
EV+G+G G Y L +G + VK L + +G+ +F + ++ H NV+
Sbjct: 55 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 114
Query: 406 LRAFYY-SKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
L S+ L+V YM G L + R P D + L A+G+ +L
Sbjct: 115 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTVKD-LIGFGLQVAKGMKYL-A 169
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGL-NPLFG-------NTTPPTRVAGYRAPEVVE 516
S K VH ++ A N +L V+DFGL ++ N T + A E ++
Sbjct: 170 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 229
Query: 517 TRKVTFKSDVYSFGVLLLELLTGKAP 542
T+K T KSDV+SFGVLL EL+T AP
Sbjct: 230 TQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 96/206 (46%), Gaps = 20/206 (9%)
Query: 352 EVLGKGSVGTSYKAVL--EEGTTV--VVKRLKEVA-VGK-REFEMQMEVLGKIKHDNVVP 405
EV+G+G G Y L +G + VK L + +G+ +F + ++ H NV+
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 406 LRAFYY-SKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
L S+ L+V YM G L + R P D + L A+G+ +L
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTVKD-LIGFGLQVAKGMKYL-A 149
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGL-NPLFG-------NTTPPTRVAGYRAPEVVE 516
S K VH ++ A N +L V+DFGL ++ N T + A E ++
Sbjct: 150 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 209
Query: 517 TRKVTFKSDVYSFGVLLLELLTGKAP 542
T+K T KSDV+SFGVLL EL+T AP
Sbjct: 210 TQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 96/206 (46%), Gaps = 20/206 (9%)
Query: 352 EVLGKGSVGTSYKAVL--EEGTTV--VVKRLKEVA-VGK-REFEMQMEVLGKIKHDNVVP 405
EV+G+G G Y L +G + VK L + +G+ +F + ++ H NV+
Sbjct: 28 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 87
Query: 406 LRAFYY-SKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
L S+ L+V YM G L + R P D + L A+G+ +L
Sbjct: 88 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTVKD-LIGFGLQVAKGMKYL-A 142
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGL-NPLFG-------NTTPPTRVAGYRAPEVVE 516
S K VH ++ A N +L V+DFGL ++ N T + A E ++
Sbjct: 143 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 202
Query: 517 TRKVTFKSDVYSFGVLLLELLTGKAP 542
T+K T KSDV+SFGVLL EL+T AP
Sbjct: 203 TQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 96/206 (46%), Gaps = 20/206 (9%)
Query: 352 EVLGKGSVGTSYKAVL--EEGTTV--VVKRLKEVA-VGK-REFEMQMEVLGKIKHDNVVP 405
EV+G+G G Y L +G + VK L + +G+ +F + ++ H NV+
Sbjct: 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 92
Query: 406 LRAFYY-SKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
L S+ L+V YM G L + R P D + L A+G+ +L
Sbjct: 93 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTVKD-LIGFGLQVAKGMKYL-A 147
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGL-NPLFG-------NTTPPTRVAGYRAPEVVE 516
S K VH ++ A N +L V+DFGL ++ N T + A E ++
Sbjct: 148 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 207
Query: 517 TRKVTFKSDVYSFGVLLLELLTGKAP 542
T+K T KSDV+SFGVLL EL+T AP
Sbjct: 208 TQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 96/206 (46%), Gaps = 20/206 (9%)
Query: 352 EVLGKGSVGTSYKAVL--EEGTTV--VVKRLKEVA-VGK-REFEMQMEVLGKIKHDNVVP 405
EV+G+G G Y L +G + VK L + +G+ +F + ++ H NV+
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 90
Query: 406 LRAFYY-SKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
L S+ L+V YM G L + R P D + L A+G+ +L
Sbjct: 91 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTVKD-LIGFGLQVAKGMKYL-A 145
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGL-NPLFG-------NTTPPTRVAGYRAPEVVE 516
S K VH ++ A N +L V+DFGL ++ N T + A E ++
Sbjct: 146 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 205
Query: 517 TRKVTFKSDVYSFGVLLLELLTGKAP 542
T+K T KSDV+SFGVLL EL+T AP
Sbjct: 206 TQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 96/206 (46%), Gaps = 20/206 (9%)
Query: 352 EVLGKGSVGTSYKAVL--EEGTTV--VVKRLKEVA-VGK-REFEMQMEVLGKIKHDNVVP 405
EV+G+G G Y L +G + VK L + +G+ +F + ++ H NV+
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 406 LRAFYY-SKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
L S+ L+V YM G L + R P D + L A+G+ +L
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTVKD-LIGFGLQVAKGMKYL-A 150
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGL-NPLFG-------NTTPPTRVAGYRAPEVVE 516
S K VH ++ A N +L V+DFGL ++ N T + A E ++
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 210
Query: 517 TRKVTFKSDVYSFGVLLLELLTGKAP 542
T+K T KSDV+SFGVLL EL+T AP
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 121/257 (47%), Gaps = 54/257 (21%)
Query: 354 LGKGSVGTSYKA-VLEEGTTVVVKRL--------KEVAVGKREFEMQMEVLGKIKHDNVV 404
+GKG G +K ++++ + V +K L E+ +EF+ ++ ++ + H N+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 405 PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLH- 463
L ++ +V +++P G L L P+ W ++R+ L A G+ ++
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLYHRLLDKA----HPIKWSVKLRLMLDIALGIEYMQN 140
Query: 464 VSGKIVHGNIKASNILLRP-DHDA--C--VSDFGLNP--------LFGNTTPPTRVAGYR 510
+ IVH ++++ NI L+ D +A C V+DF L+ L GN +
Sbjct: 141 QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGLLGNFQ-------WM 193
Query: 511 APEVV--ETRKVTFKSDVYSFGVLLLELLTGKAP-NQASLG---------EEGI------ 552
APE + E T K+D YSF ++L +LTG+ P ++ S G EEG+
Sbjct: 194 APETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPE 253
Query: 553 DLPRWVQSVVREEWTAE 569
D P +++V+ W+ +
Sbjct: 254 DCPPRLRNVIELCWSGD 270
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 123/280 (43%), Gaps = 34/280 (12%)
Query: 352 EVLGKGSVGTSYKAVLE----EGTTVVVKRLK--EVAVGKREFEMQMEVLGKIKHDNVVP 405
+V+G G G L+ + +V +K LK +R+F + ++G+ H N++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
L ++V +YM GSL + L + T + +R A G+ +L
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLR---GIASGMKYLSDM 166
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGL------NPLFGNTTPPTRV-AGYRAPEVVETR 518
G VH ++ A NIL+ + VSDFGL +P TT ++ + +PE + R
Sbjct: 167 G-YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 519 KVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRY 578
K T SDV+S+G++L E++ S GE P W S + + D E R
Sbjct: 226 KFTSASDVWSYGIVLWEVM--------SYGER----PYWEMS---NQDVIKAVD-EGYRL 269
Query: 579 HNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNR 618
+ L Q+ + C + RP +++V +++ + R
Sbjct: 270 PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 354 LGKGSVGTSYKAVLEEGTTVV-VKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAF-YY 411
+GKGS G YK + VV +K + ++Q E+ + D+ R F Y
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSY 86
Query: 412 SKDEKL-LVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVH 470
K KL ++ +Y+ GS LL PL+ I +GL +LH KI H
Sbjct: 87 LKSTKLWIIMEYLGGGSALDLLKPG------PLEETYIATILREILKGLDYLHSERKI-H 139
Query: 471 GNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTR----VAGYRAPEVVETRKVTFKSDV 526
+IKA+N+LL D ++DFG+ +T + APEV++ FK+D+
Sbjct: 140 RDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKADI 199
Query: 527 YSFGVLLLELLTGKAPN 543
+S G+ +EL G+ PN
Sbjct: 200 WSLGITAIELAKGEPPN 216
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 123/280 (43%), Gaps = 34/280 (12%)
Query: 352 EVLGKGSVGTSYKAVLE----EGTTVVVKRLK--EVAVGKREFEMQMEVLGKIKHDNVVP 405
+V+G G G L+ + +V +K LK +R+F + ++G+ H N++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
L ++V +YM GSL + L + T + +R A G+ +L
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLR---GIASGMKYLSDM 166
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGL------NPLFGNTTPPTRV-AGYRAPEVVETR 518
G VH ++ A NIL+ + VSDFGL +P TT ++ + +PE + R
Sbjct: 167 G-YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 519 KVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRY 578
K T SDV+S+G++L E++ S GE P W S + + D E R
Sbjct: 226 KFTSASDVWSYGIVLWEVM--------SYGER----PYWEMS---NQDVIKAVD-EGYRL 269
Query: 579 HNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNR 618
+ L Q+ + C + RP +++V +++ + R
Sbjct: 270 PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 123/280 (43%), Gaps = 34/280 (12%)
Query: 352 EVLGKGSVGTSYKAVLE----EGTTVVVKRLK--EVAVGKREFEMQMEVLGKIKHDNVVP 405
+V+G G G L+ + +V +K LK +R+F + ++G+ H N++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
L ++V +YM GSL + L + T + +R A G+ +L
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLR---GIASGMKYLSDM 166
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGL------NPLFGNTTPPTRV-AGYRAPEVVETR 518
G VH ++ A NIL+ + VSDFGL +P TT ++ + +PE + R
Sbjct: 167 G-YVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 519 KVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRY 578
K T SDV+S+G++L E++ S GE P W S + + D E R
Sbjct: 226 KFTSASDVWSYGIVLWEVM--------SYGER----PYWEMS---NQDVIKAVD-EGYRL 269
Query: 579 HNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNR 618
+ L Q+ + C + RP +++V +++ + R
Sbjct: 270 PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 125/283 (44%), Gaps = 40/283 (14%)
Query: 352 EVLGKGSVGTSYKAVLE----EGTTVVVKRLKEVAVG-----KREFEMQMEVLGKIKHDN 402
+V+G G G L+ + +V +K LK VG +R+F + ++G+ H N
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK---VGYTEKQRRDFLGEASIMGQFDHPN 78
Query: 403 VVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHL 462
++ L ++V +YM GSL + L + T + +R A G+ +L
Sbjct: 79 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLR---GIASGMKYL 134
Query: 463 HVSGKIVHGNIKASNILLRPDHDACVSDFGL------NPLFGNTTPPTRV-AGYRAPEVV 515
G VH ++ A NIL+ + VSDFGL +P TT ++ + +PE +
Sbjct: 135 SDMG-YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 193
Query: 516 ETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVEL 575
RK T SDV+S+G++L E++ S GE P W S + + D E
Sbjct: 194 AYRKFTSASDVWSYGIVLWEVM--------SYGER----PYWEMS---NQDVIKAVD-EG 237
Query: 576 MRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNR 618
R + L Q+ + C + RP +++V +++ + R
Sbjct: 238 YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 280
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 125/283 (44%), Gaps = 40/283 (14%)
Query: 352 EVLGKGSVGTSYKAVLE----EGTTVVVKRLKEVAVG-----KREFEMQMEVLGKIKHDN 402
+V+G G G L+ + +V +K LK VG +R+F + ++G+ H N
Sbjct: 39 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK---VGYTEKQRRDFLGEASIMGQFDHPN 95
Query: 403 VVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHL 462
++ L ++V +YM GSL + L + T + +R A G+ +L
Sbjct: 96 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLR---GIASGMKYL 151
Query: 463 HVSGKIVHGNIKASNILLRPDHDACVSDFGL------NPLFGNTTPPTRV-AGYRAPEVV 515
G VH ++ A NIL+ + VSDFGL +P TT ++ + +PE +
Sbjct: 152 SDMG-YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 210
Query: 516 ETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVEL 575
RK T SDV+S+G++L E++ S GE P W S + + D E
Sbjct: 211 AYRKFTSASDVWSYGIVLWEVM--------SYGER----PYWEMS---NQDVIKAVD-EG 254
Query: 576 MRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNR 618
R + L Q+ + C + RP +++V +++ + R
Sbjct: 255 YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 297
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 123/280 (43%), Gaps = 34/280 (12%)
Query: 352 EVLGKGSVGTSYKAVLE----EGTTVVVKRLK--EVAVGKREFEMQMEVLGKIKHDNVVP 405
+V+G G G L+ + +V +K LK +R+F + ++G+ H N++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
L ++V +YM GSL + L + T + +R A G+ +L
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLR---GIASGMKYLSDM 166
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGL------NPLFGNTTPPTRV-AGYRAPEVVETR 518
G VH ++ A NIL+ + VSDFGL +P TT ++ + +PE + R
Sbjct: 167 G-YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 519 KVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRY 578
K T SDV+S+G++L E++ S GE P W S + + D E R
Sbjct: 226 KFTSASDVWSYGIVLWEVM--------SYGER----PYWEMS---NQDVIKAVD-EGYRL 269
Query: 579 HNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNR 618
+ L Q+ + C + RP +++V +++ + R
Sbjct: 270 PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 123/280 (43%), Gaps = 34/280 (12%)
Query: 352 EVLGKGSVGTSYKAVLE----EGTTVVVKRLK--EVAVGKREFEMQMEVLGKIKHDNVVP 405
+V+G G G L+ + +V +K LK +R+F + ++G+ H N++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
L ++V +YM GSL + L + T + +R A G+ +L
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLR---GIASGMKYLSDM 166
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGL------NPLFGNTTPPTRV-AGYRAPEVVETR 518
G VH ++ A NIL+ + VSDFGL +P TT ++ + +PE + R
Sbjct: 167 G-YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 519 KVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRY 578
K T SDV+S+G++L E++ S GE P W S + + D E R
Sbjct: 226 KFTSASDVWSYGIVLWEVM--------SYGER----PYWEMS---NQDVIKAVD-EGYRL 269
Query: 579 HNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNR 618
+ L Q+ + C + RP +++V +++ + R
Sbjct: 270 PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 123/280 (43%), Gaps = 34/280 (12%)
Query: 352 EVLGKGSVGTSYKAVLE----EGTTVVVKRLK--EVAVGKREFEMQMEVLGKIKHDNVVP 405
+V+G G G L+ + +V +K LK +R+F + ++G+ H N++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
L ++V +YM GSL + L + T + +R A G+ +L
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLR---GIASGMKYLSDM 166
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGL------NPLFGNTTPPTRV-AGYRAPEVVETR 518
G VH ++ A NIL+ + VSDFGL +P TT ++ + +PE + R
Sbjct: 167 G-YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 519 KVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRY 578
K T SDV+S+G++L E++ S GE P W S + + D E R
Sbjct: 226 KFTSASDVWSYGIVLWEVM--------SYGER----PYWEMS---NQDVIKAVD-EGYRL 269
Query: 579 HNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNR 618
+ L Q+ + C + RP +++V +++ + R
Sbjct: 270 PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 85/187 (45%), Gaps = 18/187 (9%)
Query: 370 GTTVVVKRLKEVAVGKRE--FEMQMEVLGKIKHDNVVPLRAFYYSKDEK--LLVYDYMPA 425
G V VK LK + ++ ++++L + H++++ + + EK LV +Y+P
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPL 102
Query: 426 GSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHD 485
GSL L R + + A G+A+LH +H N+ A N+LL D
Sbjct: 103 GSLRDYL------PRHSIGLAQLLLFAQQICEGMAYLHAQ-HYIHRNLAARNVLLDNDRL 155
Query: 486 ACVSDFGLNPLFGNTTPPTRV-------AGYRAPEVVETRKVTFKSDVYSFGVLLLELLT 538
+ DFGL RV + APE ++ K + SDV+SFGV L ELLT
Sbjct: 156 VKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
Query: 539 GKAPNQA 545
+Q+
Sbjct: 216 HCDSSQS 222
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 105/226 (46%), Gaps = 28/226 (12%)
Query: 352 EVLGKGSVGTSYKAVLE----EGTTVVVKRLKEVAVGK--REFEMQMEVLGKIKHDNVVP 405
+V+G G G L+ V +K LK K R+F + ++G+ H N++
Sbjct: 35 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 94
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGR-TPLDWDNRMRIALSAARGLAHLHV 464
L +++ +YM GSL A L + GR T + +R S + L+ +
Sbjct: 95 LEGVVTKCKPVMIITEYMENGSLDAFLR--KNDGRFTVIQLVGMLRGIGSGMKYLSDMSA 152
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGL------NPLFGNTTPPTRV-AGYRAPEVVET 517
VH ++ A NIL+ + VSDFG+ +P TT ++ + APE +
Sbjct: 153 ----VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAY 208
Query: 518 RKVTFKSDVYSFGVLLLELLT-GKAP-----NQASLG--EEGIDLP 555
RK T SDV+S+G+++ E+++ G+ P NQ + EEG LP
Sbjct: 209 RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLP 254
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 123/280 (43%), Gaps = 34/280 (12%)
Query: 352 EVLGKGSVGTSYKAVLE----EGTTVVVKRLK--EVAVGKREFEMQMEVLGKIKHDNVVP 405
+V+G G G L+ + +V +K LK +R+F + ++G+ H N++
Sbjct: 49 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 108
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
L ++V +YM GSL + L + T + +R A G+ +L
Sbjct: 109 LEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLR---GIASGMKYLSDM 164
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGL------NPLFGNTTPPTRV-AGYRAPEVVETR 518
G VH ++ A NIL+ + VSDFGL +P TT ++ + +PE + R
Sbjct: 165 G-YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 223
Query: 519 KVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRY 578
K T SDV+S+G++L E++ S GE P W S + + D E R
Sbjct: 224 KFTSASDVWSYGIVLWEVM--------SYGER----PYWEMS---NQDVIKAVD-EGYRL 267
Query: 579 HNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNR 618
+ L Q+ + C + RP +++V +++ + R
Sbjct: 268 PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 307
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 95/206 (46%), Gaps = 20/206 (9%)
Query: 352 EVLGKGSVGTSYKAVL--EEGTTV--VVKRLKEVA-VGK-REFEMQMEVLGKIKHDNVVP 405
EV+G+G G Y L +G + VK L + +G+ +F + ++ H NV+
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 406 LRAFYY-SKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
L S+ L+V YM G L + R P D + L A+G+ L
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTVKD-LIGFGLQVAKGMKFL-A 148
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGL-----NPLFG---NTTPPTRVAGYRAPEVVE 516
S K VH ++ A N +L V+DFGL + F N T + A E ++
Sbjct: 149 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 208
Query: 517 TRKVTFKSDVYSFGVLLLELLTGKAP 542
T+K T KSDV+SFGVLL EL+T AP
Sbjct: 209 TQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 352 EVLGKGSVGTSYKAVL--EEGTTV--VVKRLKEVA-VGK-REFEMQMEVLGKIKHDNVVP 405
EV+G+G G Y L +G + VK L + +G+ +F + ++ H NV+
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 406 LRAFYY-SKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
L S+ L+V YM G L + R P D + L A+G+ L
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTVKD-LIGFGLQVAKGMKFL-A 151
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGLN--------PLFGNTTPPTRVAGYRAPEVVE 516
S K VH ++ A N +L V+DFGL N T + A E ++
Sbjct: 152 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 211
Query: 517 TRKVTFKSDVYSFGVLLLELLTGKAP 542
T+K T KSDV+SFGVLL EL+T AP
Sbjct: 212 TQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 352 EVLGKGSVGTSYKAVL--EEGTTV--VVKRLKEVA-VGK-REFEMQMEVLGKIKHDNVVP 405
EV+G+G G Y L +G + VK L + +G+ +F + ++ H NV+
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 406 LRAFYY-SKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
L S+ L+V YM G L + R P D + L A+G+ L
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTVKD-LIGFGLQVAKGMKFL-A 151
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGLN--------PLFGNTTPPTRVAGYRAPEVVE 516
S K VH ++ A N +L V+DFGL N T + A E ++
Sbjct: 152 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQ 211
Query: 517 TRKVTFKSDVYSFGVLLLELLTGKAP 542
T+K T KSDV+SFGVLL EL+T AP
Sbjct: 212 TQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 352 EVLGKGSVGTSYKAVL--EEGTTV--VVKRLKEVA-VGK-REFEMQMEVLGKIKHDNVVP 405
EV+G+G G Y L +G + VK L + +G+ +F + ++ H NV+
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 406 LRAFYY-SKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
L S+ L+V YM G L + R P D + L A+G+ L
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTVKD-LIGFGLQVAKGMKFL-A 150
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGLN--------PLFGNTTPPTRVAGYRAPEVVE 516
S K VH ++ A N +L V+DFGL N T + A E ++
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 210
Query: 517 TRKVTFKSDVYSFGVLLLELLTGKAP 542
T+K T KSDV+SFGVLL EL+T AP
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 96/209 (45%), Gaps = 34/209 (16%)
Query: 354 LGKGSVGTSYKAVLE-EGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYY- 411
+GKG G + E V V E A RE E+ VL ++H+N++ A
Sbjct: 45 IGKGRYGEVWMGKWRGEKVAVKVFFTTEEASWFRETEIYQTVL--MRHENILGFIAADIK 102
Query: 412 ---SKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV---- 464
S + L+ DY GSL L T LD + +++A S+ GL HLH
Sbjct: 103 GTGSWTQLYLITDYHENGSLYDYLKS------TTLDAKSMLKLAYSSVSGLCHLHTEIFS 156
Query: 465 -SGK--IVHGNIKASNILLRPDHDACVSDFGLNPLFGNTT------PPTRVAG--YRAPE 513
GK I H ++K+ NIL++ + C++D GL F + T P TRV Y PE
Sbjct: 157 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPE 216
Query: 514 VVETR------KVTFKSDVYSFGVLLLEL 536
V++ + +D+YSFG++L E+
Sbjct: 217 VLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 352 EVLGKGSVGTSYKAVL--EEGTTV--VVKRLKEVA-VGK-REFEMQMEVLGKIKHDNVVP 405
EV+G+G G Y L +G + VK L + +G+ +F + ++ H NV+
Sbjct: 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 154
Query: 406 LRAFYY-SKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
L S+ L+V YM G L + R P D + L A+G+ L
Sbjct: 155 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTVKD-LIGFGLQVAKGMKFL-A 209
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGLN--------PLFGNTTPPTRVAGYRAPEVVE 516
S K VH ++ A N +L V+DFGL N T + A E ++
Sbjct: 210 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 269
Query: 517 TRKVTFKSDVYSFGVLLLELLTGKAP 542
T+K T KSDV+SFGVLL EL+T AP
Sbjct: 270 TQKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 114/242 (47%), Gaps = 30/242 (12%)
Query: 335 EGGVYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRL--KEVAVGKREFEMQM 392
+G VY D D+L E LG G+ G ++ V + V V + + K + ++
Sbjct: 46 QGSVY--DYYDIL----EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEI 99
Query: 393 EVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIA 452
++ ++ H ++ L + K E +L+ +++ G L + + + + N MR
Sbjct: 100 SIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRI-AAEDYKMSEAEVINYMR-- 156
Query: 453 LSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVS--DFGL----NP--LFGNTTPPT 504
A GL H+H IVH +IK NI+ + V DFGL NP + TT
Sbjct: 157 -QACEGLKHMH-EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTA-- 212
Query: 505 RVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVRE 564
A + APE+V+ V F +D+++ GVL LL+G +P GE+ ++ +Q+V R
Sbjct: 213 -TAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSP---FAGEDDLET---LQNVKRC 265
Query: 565 EW 566
+W
Sbjct: 266 DW 267
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 352 EVLGKGSVGTSYKAVL--EEGTTV--VVKRLKEVA-VGK-REFEMQMEVLGKIKHDNVVP 405
EV+G+G G Y L +G + VK L + +G+ +F + ++ H NV+
Sbjct: 41 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 100
Query: 406 LRAFYY-SKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
L S+ L+V YM G L + R P D + L A+G+ L
Sbjct: 101 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTVKD-LIGFGLQVAKGMKFL-A 155
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGLN--------PLFGNTTPPTRVAGYRAPEVVE 516
S K VH ++ A N +L V+DFGL N T + A E ++
Sbjct: 156 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 215
Query: 517 TRKVTFKSDVYSFGVLLLELLTGKAP 542
T+K T KSDV+SFGVLL EL+T AP
Sbjct: 216 TQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 352 EVLGKGSVGTSYKAVL--EEGTTV--VVKRLKEVA-VGK-REFEMQMEVLGKIKHDNVVP 405
EV+G+G G Y L +G + VK L + +G+ +F + ++ H NV+
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 406 LRAFYY-SKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
L S+ L+V YM G L + R P D + L A+G+ L
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTVKD-LIGFGLQVAKGMKFL-A 150
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGLN--------PLFGNTTPPTRVAGYRAPEVVE 516
S K VH ++ A N +L V+DFGL N T + A E ++
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 210
Query: 517 TRKVTFKSDVYSFGVLLLELLTGKAP 542
T+K T KSDV+SFGVLL EL+T AP
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 15/209 (7%)
Query: 342 DLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREF---EMQMEVLGKI 398
D E+L E +GKGS G +K + VV ++ ++ + E + ++ VL +
Sbjct: 20 DPEELF-TKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQC 78
Query: 399 KHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARG 458
V Y + ++ +Y+ GS LL P D + +G
Sbjct: 79 DSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAG------PFDEFQIATMLKEILKG 132
Query: 459 LAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPP--TRVAG--YRAPEV 514
L +LH S K +H +IKA+N+LL D ++DFG+ +T T V + APEV
Sbjct: 133 LDYLH-SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEV 191
Query: 515 VETRKVTFKSDVYSFGVLLLELLTGKAPN 543
++ K+D++S G+ +EL G+ PN
Sbjct: 192 IQQSAYDSKADIWSLGITAIELAKGEPPN 220
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 15/211 (7%)
Query: 340 SFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIK 399
S D E+L E +GKGS G +K + VV ++ ++ + E E + + +
Sbjct: 22 SMDPEELF-TKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLS 80
Query: 400 HDNVVPLRAFY--YSKDEKL-LVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAA 456
+ + +Y Y KD KL ++ +Y+ GS LL PLD I
Sbjct: 81 QCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG------PLDETQIATILREIL 134
Query: 457 RGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRV----AGYRAP 512
+GL +LH S K +H +IKA+N+LL + ++DFG+ +T + AP
Sbjct: 135 KGLDYLH-SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAP 193
Query: 513 EVVETRKVTFKSDVYSFGVLLLELLTGKAPN 543
EV++ K+D++S G+ +EL G+ P+
Sbjct: 194 EVIKQSAYDSKADIWSLGITAIELARGEPPH 224
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 105/226 (46%), Gaps = 28/226 (12%)
Query: 352 EVLGKGSVGTSYKAVLE----EGTTVVVKRLKEVAVGK--REFEMQMEVLGKIKHDNVVP 405
+V+G G G L+ V +K LK K R+F + ++G+ H N++
Sbjct: 20 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 79
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGR-TPLDWDNRMRIALSAARGLAHLHV 464
L +++ +YM GSL A L + GR T + +R S + L+ +
Sbjct: 80 LEGVVTKCKPVMIITEYMENGSLDAFLR--KNDGRFTVIQLVGMLRGIGSGMKYLSDMSY 137
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGL------NPLFGNTTPPTRV-AGYRAPEVVET 517
VH ++ A NIL+ + VSDFG+ +P TT ++ + APE +
Sbjct: 138 ----VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAY 193
Query: 518 RKVTFKSDVYSFGVLLLELLT-GKAP-----NQASLG--EEGIDLP 555
RK T SDV+S+G+++ E+++ G+ P NQ + EEG LP
Sbjct: 194 RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLP 239
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 105/226 (46%), Gaps = 28/226 (12%)
Query: 352 EVLGKGSVGTSYKAVLE----EGTTVVVKRLKEVAVGK--REFEMQMEVLGKIKHDNVVP 405
+V+G G G L+ V +K LK K R+F + ++G+ H N++
Sbjct: 14 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 73
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGR-TPLDWDNRMRIALSAARGLAHLHV 464
L +++ +YM GSL A L + GR T + +R S + L+ +
Sbjct: 74 LEGVVTKCKPVMIITEYMENGSLDAFLR--KNDGRFTVIQLVGMLRGIGSGMKYLSDMSY 131
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGL------NPLFGNTTPPTRV-AGYRAPEVVET 517
VH ++ A NIL+ + VSDFG+ +P TT ++ + APE +
Sbjct: 132 ----VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAY 187
Query: 518 RKVTFKSDVYSFGVLLLELLT-GKAP-----NQASLG--EEGIDLP 555
RK T SDV+S+G+++ E+++ G+ P NQ + EEG LP
Sbjct: 188 RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLP 233
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 99/203 (48%), Gaps = 13/203 (6%)
Query: 346 LLRASAEVLGKGSVGTSYKAVLEE-GTTVVVKRLKEVAVGKREFEM-QMEVLGKIKHDNV 403
LL S +G+GS G A + G V VK + +RE ++ ++ +H NV
Sbjct: 45 LLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNV 104
Query: 404 VPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLH 463
V + Y +E ++ +++ G+L+ ++ R L+ + + + + LA+LH
Sbjct: 105 VEMYKSYLVGEELWVLMEFLQGGALTDIVSQVR------LNEEQIATVCEAVLQALAYLH 158
Query: 464 VSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTR-VAG---YRAPEVVETRK 519
G ++H +IK+ +ILL D +SDFG P + + G + APEV+
Sbjct: 159 AQG-VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSL 217
Query: 520 VTFKSDVYSFGVLLLELLTGKAP 542
+ D++S G++++E++ G+ P
Sbjct: 218 YATEVDIWSLGIMVIEMVDGEPP 240
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 15/211 (7%)
Query: 340 SFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIK 399
S D E+L E +GKGS G +K + VV ++ ++ + E E + + +
Sbjct: 2 SLDPEELF-TKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLS 60
Query: 400 HDNVVPLRAFY--YSKDEKL-LVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAA 456
+ + +Y Y KD KL ++ +Y+ GS LL PLD I
Sbjct: 61 QCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG------PLDETQIATILREIL 114
Query: 457 RGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTR----VAGYRAP 512
+GL +LH S K +H +IKA+N+LL + ++DFG+ +T + AP
Sbjct: 115 KGLDYLH-SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAP 173
Query: 513 EVVETRKVTFKSDVYSFGVLLLELLTGKAPN 543
EV++ K+D++S G+ +EL G+ P+
Sbjct: 174 EVIKQSAYDSKADIWSLGITAIELARGEPPH 204
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 15/211 (7%)
Query: 340 SFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIK 399
S D E+L E +GKGS G +K + VV ++ ++ + E E + + +
Sbjct: 2 SLDPEELF-TKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLS 60
Query: 400 HDNVVPLRAFY--YSKDEKL-LVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAA 456
+ + +Y Y KD KL ++ +Y+ GS LL PLD I
Sbjct: 61 QCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG------PLDETQIATILREIL 114
Query: 457 RGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRV----AGYRAP 512
+GL +LH S K +H +IKA+N+LL + ++DFG+ +T + AP
Sbjct: 115 KGLDYLH-SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAP 173
Query: 513 EVVETRKVTFKSDVYSFGVLLLELLTGKAPN 543
EV++ K+D++S G+ +EL G+ P+
Sbjct: 174 EVIKQSAYDSKADIWSLGITAIELARGEPPH 204
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 90/204 (44%), Gaps = 26/204 (12%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVK-RLKEVAVGKRE-------FEMQMEVLGKIKHDNVVP 405
LG G + T Y L E T + +K +K + + RE FE ++ ++ H N+V
Sbjct: 19 LGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVS 75
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALL--HGSRGSGRTPLDWDNRMRIALSAARGLAHLH 463
+ D LV +Y+ +LS + HG PL D + G+ H H
Sbjct: 76 MIDVDEEDDCYYLVMEYIEGPTLSEYIESHG-------PLSVDTAINFTNQILDGIKHAH 128
Query: 464 VSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT--TPPTRVAG---YRAPEVVETR 518
+IVH +IK NIL+ + + DFG+ T T V G Y +PE +
Sbjct: 129 -DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGE 187
Query: 519 KVTFKSDVYSFGVLLLELLTGKAP 542
+D+YS G++L E+L G+ P
Sbjct: 188 ATDECTDIYSIGIVLYEMLVGEPP 211
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 89/204 (43%), Gaps = 21/204 (10%)
Query: 354 LGKGSVGTSYKAVLEEGTTVV-VKRLKEVAVGKREFEMQM----EVLGKIKHDNVVPLRA 408
LGKG G Y A ++ +V +K L + + K E Q+ E+ + H N++ L
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYN 90
Query: 409 FYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKI 468
++Y + L+ +Y P G L L S D I A L + H K+
Sbjct: 91 YFYDRRRIYLILEYAPRGELYKELQKS-----CTFDEQRTATIMEELADALMYCH-GKKV 144
Query: 469 VHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTR------VAGYRAPEVVETRKVTF 522
+H +IK N+LL + ++DFG + P R Y PE++E R
Sbjct: 145 IHRDIKPENLLLGLKGELKIADFG----WSVHAPSLRRKTMCGTLDYLPPEMIEGRMHNE 200
Query: 523 KSDVYSFGVLLLELLTGKAPNQAS 546
K D++ GVL ELL G P +++
Sbjct: 201 KVDLWCIGVLCYELLVGNPPFESA 224
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 129/310 (41%), Gaps = 59/310 (19%)
Query: 354 LGKGSVGTSYKA------VLEEGTTVVVKRLKEVAVG--KREFEMQMEVLGKIKHDNVVP 405
+G+G+ G ++A E T V VK LKE A + +F+ + ++ + + N+V
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHG-----------------SRGS--GRTPLDWD 446
L L+++YM G L+ L +R S G PL
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 447 NRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLF--------- 497
++ IA A G+A+L K VH ++ N L+ + ++DFGL+
Sbjct: 175 EQLCIARQVAAGMAYLS-ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKAD 233
Query: 498 GNTTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPR 556
GN P R + PE + + T +SDV+++GV+L E+ + G P EE I R
Sbjct: 234 GNDAIPIR---WMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVR 290
Query: 557 WVQSVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
+ E N E+ L+++ C S +P RP+ + R+++ M
Sbjct: 291 DGNILACPE--------------NCPLELYNLMRL---CWSKLPADRPSFCSIHRILQRM 333
Query: 617 -NRGETDDGL 625
R E G+
Sbjct: 334 CERAEGTVGV 343
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 98/200 (49%), Gaps = 22/200 (11%)
Query: 352 EVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFE-------MQMEVLGKIKHDNVV 404
E +G+G+ G YKA G T +K+++ ++E E ++ +L ++KH N+V
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRL----EKEDEGIPSTTIREISILKELKHSNIV 63
Query: 405 PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
L ++K +LV++++ L LL G L+ L G+A+ H
Sbjct: 64 KLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGG----LESVTAKSFLLQLLNGIAYCH- 117
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGLNPLFG----NTTPPTRVAGYRAPEVVE-TRK 519
+++H ++K N+L+ + + ++DFGL FG T YRAP+V+ ++K
Sbjct: 118 DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKK 177
Query: 520 VTFKSDVYSFGVLLLELLTG 539
+ D++S G + E++ G
Sbjct: 178 YSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 98/200 (49%), Gaps = 22/200 (11%)
Query: 352 EVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFE-------MQMEVLGKIKHDNVV 404
E +G+G+ G YKA G T +K+++ ++E E ++ +L ++KH N+V
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRL----EKEDEGIPSTTIREISILKELKHSNIV 63
Query: 405 PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
L ++K +LV++++ L LL G L+ L G+A+ H
Sbjct: 64 KLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGG----LESVTAKSFLLQLLNGIAYCH- 117
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGLNPLFG----NTTPPTRVAGYRAPEVVE-TRK 519
+++H ++K N+L+ + + ++DFGL FG T YRAP+V+ ++K
Sbjct: 118 DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKK 177
Query: 520 VTFKSDVYSFGVLLLELLTG 539
+ D++S G + E++ G
Sbjct: 178 YSTTIDIWSVGCIFAEMVNG 197
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 18/203 (8%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKR--EFEMQMEVLGKIKHDNVVPLRAFYY 411
LG G+ G YKA +E + ++ E + ++ +++E+L H +V L YY
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 412 SKDEKLLVYDYMPAGSLSA-LLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVH 470
+ ++ ++ P G++ A +L RG + R + L LH S +I+H
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQML-----EALNFLH-SKRIIH 132
Query: 471 GNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTR----VAGYRAPEVV--ETRKVT--- 521
++KA N+L+ + D ++DFG++ T + APEVV ET K T
Sbjct: 133 RDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYD 192
Query: 522 FKSDVYSFGVLLLELLTGKAPNQ 544
+K+D++S G+ L+E+ + P+
Sbjct: 193 YKADIWSLGITLIEMAQIEPPHH 215
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 98/200 (49%), Gaps = 22/200 (11%)
Query: 352 EVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFE-------MQMEVLGKIKHDNVV 404
E +G+G+ G YKA G T +K+++ ++E E ++ +L ++KH N+V
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRL----EKEDEGIPSTTIREISILKELKHSNIV 63
Query: 405 PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
L ++K +LV++++ L LL G L+ L G+A+ H
Sbjct: 64 KLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGG----LESVTAKSFLLQLLNGIAYCH- 117
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGLNPLFG----NTTPPTRVAGYRAPEVVE-TRK 519
+++H ++K N+L+ + + ++DFGL FG T YRAP+V+ ++K
Sbjct: 118 DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKK 177
Query: 520 VTFKSDVYSFGVLLLELLTG 539
+ D++S G + E++ G
Sbjct: 178 YSTTIDIWSVGCIFAEMVNG 197
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 18/203 (8%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKR--EFEMQMEVLGKIKHDNVVPLRAFYY 411
LG G+ G YKA +E + ++ E + ++ +++E+L H +V L YY
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 412 SKDEKLLVYDYMPAGSLSA-LLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVH 470
+ ++ ++ P G++ A +L RG + R + L LH S +I+H
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQML-----EALNFLH-SKRIIH 140
Query: 471 GNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTR----VAGYRAPEVV--ETRKVT--- 521
++KA N+L+ + D ++DFG++ T + APEVV ET K T
Sbjct: 141 RDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYD 200
Query: 522 FKSDVYSFGVLLLELLTGKAPNQ 544
+K+D++S G+ L+E+ + P+
Sbjct: 201 YKADIWSLGITLIEMAQIEPPHH 223
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 126/295 (42%), Gaps = 62/295 (21%)
Query: 352 EVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRA-- 408
E++G G G +KA +G T V++R+K + E +++ L K+ H N+V
Sbjct: 18 ELIGSGGFGQVFKAKHRIDGKTYVIRRVK---YNNEKAEREVKALAKLDHVNIVHYNGCW 74
Query: 409 --FYY---SKDEKLLVYDYMP----------------------AGSLSALLHGSRGSGRT 441
F Y + D+ L DY P G+L + RG
Sbjct: 75 DGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE--- 131
Query: 442 PLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTT 501
LD + + +G+ ++H S K++H ++K SNI L + DFGL N
Sbjct: 132 KLDKVLALELFEQITKGVDYIH-SKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDG 190
Query: 502 PPTRVAG---YRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWV 558
TR G Y +PE + ++ + D+Y+ G++L ELL + + + ++
Sbjct: 191 KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL--------HVCDTAFETSKFF 242
Query: 559 QSVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMI 613
+R+ +++FD + E+ ++Q L +S P+ RP E++R +
Sbjct: 243 TD-LRDGIISDIFDKK-------EKTLLQKL------LSKKPEDRPNTSEILRTL 283
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 15/209 (7%)
Query: 342 DLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHD 401
D E+L E +GKGS G +K + VV ++ ++ + E E + + +
Sbjct: 19 DPEELF-TKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC 77
Query: 402 NVVPLRAFY--YSKDEKL-LVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARG 458
+ + +Y Y KD KL ++ +Y+ GS LL PLD I +G
Sbjct: 78 DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG------PLDETQIATILREILKG 131
Query: 459 LAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTR----VAGYRAPEV 514
L +LH S K +H +IKA+N+LL + ++DFG+ +T + APEV
Sbjct: 132 LDYLH-SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEV 190
Query: 515 VETRKVTFKSDVYSFGVLLLELLTGKAPN 543
++ K+D++S G+ +EL G+ P+
Sbjct: 191 IKQSAYDSKADIWSLGITAIELARGEPPH 219
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 38/215 (17%)
Query: 352 EVLGKGSVGTSYKA-VLEEGTTVVVKRLKEVAVGKREFEMQMEVLGK--IKHDNVVPLRA 408
E+ +G G +KA ++ + V + L++ K+ ++ + E+ +KH+N++ A
Sbjct: 21 EIKARGRFGCVWKAQLMNDFVAVKIFPLQD----KQSWQSEREIFSTPGMKHENLLQFIA 76
Query: 409 FYYS----KDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLH- 463
+ E L+ + GSL+ L G+ + W+ +A + +RGL++LH
Sbjct: 77 AEKRGSNLEVELWLITAFHDKGSLTDYLKGN------IITWNELCHVAETMSRGLSYLHE 130
Query: 464 ----VSGK-----IVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG------ 508
G+ I H + K+ N+LL+ D A ++DFGL F PP G
Sbjct: 131 DVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRR 190
Query: 509 YRAPEVVE-----TRKVTFKSDVYSFGVLLLELLT 538
Y APEV+E R + D+Y+ G++L EL++
Sbjct: 191 YMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 99/231 (42%), Gaps = 24/231 (10%)
Query: 352 EVLGKGSVGTSYKAVLEEGTTVV-VKRLK-EVAVGKREFEMQM---EVLG-KIKHDNVVP 405
++LGKGS G + A ++ +K LK +V + + E M VL +H +
Sbjct: 23 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 82
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
+ + +K+ V +Y+ G L + D A GL LH
Sbjct: 83 MFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK-----FDLSRATFYAAEIILGLQFLHSK 137
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGL--NPLFGN--TTPPTRVAGYRAPEVVETRKVT 521
G IV+ ++K NILL D ++DFG+ + G+ T Y APE++ +K
Sbjct: 138 G-IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQKYN 196
Query: 522 FKSDVYSFGVLLLELLTGKAPNQASLGEEGID--------LPRWVQSVVRE 564
D +SFGVLL E+L G++P EE PRW++ ++
Sbjct: 197 HSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKD 247
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 90/192 (46%), Gaps = 30/192 (15%)
Query: 435 SRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL- 493
S G + P+ ++ + + ARG+ L S K +H ++ A NILL ++ + DFGL
Sbjct: 188 SDGFYKEPITMEDLISYSFQVARGMEFLS-SRKCIHRDLAARNILLSENNVVKICDFGLA 246
Query: 494 -----NPLF---GNTTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQ 544
NP + G+T P + + APE + + + KSDV+S+GVLL E+ + G +P
Sbjct: 247 RDIYKNPDYVRKGDTRLPLK---WMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYP 303
Query: 545 ASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRP 604
G+ + S +RE MR E ++ QI + C P +RP
Sbjct: 304 ------GVQMDEDFCSRLREG----------MRMRAPEYSTPEIYQIMLDCWHRDPKERP 347
Query: 605 AMQEVVRMIENM 616
E+V + ++
Sbjct: 348 RFAELVEKLGDL 359
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 99/231 (42%), Gaps = 24/231 (10%)
Query: 352 EVLGKGSVGTSYKAVLEEGTTVV-VKRLK-EVAVGKREFEMQM---EVLG-KIKHDNVVP 405
++LGKGS G + A ++ +K LK +V + + E M VL +H +
Sbjct: 24 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 83
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
+ + +K+ V +Y+ G L + D A GL LH
Sbjct: 84 MFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK-----FDLSRATFYAAEIILGLQFLHSK 138
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGL--NPLFGN--TTPPTRVAGYRAPEVVETRKVT 521
G IV+ ++K NILL D ++DFG+ + G+ T Y APE++ +K
Sbjct: 139 G-IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQKYN 197
Query: 522 FKSDVYSFGVLLLELLTGKAPNQASLGEEGID--------LPRWVQSVVRE 564
D +SFGVLL E+L G++P EE PRW++ ++
Sbjct: 198 HSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKD 248
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 96/199 (48%), Gaps = 15/199 (7%)
Query: 352 EVLGKGSVGTSY--KAVLEEGTTVVVKRLKEV-AVGKREFEMQMEVLGKIKHDNVVPLRA 408
EVLG G+ + K L G +K +K+ A E ++ VL KIKH+N+V L
Sbjct: 15 EVLGSGAFSEVFLVKQRLT-GKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLED 73
Query: 409 FYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKI 468
Y S LV + G L + RG T D ++ LSA + +LH +G I
Sbjct: 74 IYESTTHYYLVMQLVSGGELFDRI-LERGV-YTEKDASLVIQQVLSAVK---YLHENG-I 127
Query: 469 VHGNIKASNIL-LRPDHDA--CVSDFGLNPLFGNTTPPTRVA--GYRAPEVVETRKVTFK 523
VH ++K N+L L P+ ++ ++DFGL+ + N T GY APEV+ + +
Sbjct: 128 VHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQKPYSKA 187
Query: 524 SDVYSFGVLLLELLTGKAP 542
D +S GV+ LL G P
Sbjct: 188 VDCWSIGVITYILLCGYPP 206
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 105/228 (46%), Gaps = 31/228 (13%)
Query: 352 EVLGKGSVGTSYKAV-LEEGTTV----VVKRLKEVAVGKREFEMQME--VLGKIKHDNVV 404
+VLG G+ GT YK + + EG V +K L+E K E+ E V+ + + +V
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 405 PLRAFYYSKDEKLLVYDYMPAGSLSALL--HGSRGSGRTPLDWDNRMRIALSAARGLAHL 462
L + +L++ MP G L + H + L+W + A+G+ +L
Sbjct: 82 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 134
Query: 463 HVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAGYRAP------EVVE 516
++VH ++ A N+L++ ++DFGL L G G + P E +
Sbjct: 135 E-DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 193
Query: 517 TRKVTFKSDVYSFGVLLLELLT-GKAPNQ-------ASLGEEGIDLPR 556
R T +SDV+S+GV + EL+T G P +S+ E+G LP+
Sbjct: 194 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 241
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 96/228 (42%), Gaps = 33/228 (14%)
Query: 353 VLGKGSVGTSYKA----VLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRA 408
+LGKGS G K +E V+ + ++E+L K+ H N++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 409 FYYSKDEKLLVYDYMPAGSL-SALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGK 467
+V + G L ++ R S + RI G+ ++H
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEH------DAARIIKQVFSGITYMH-KHN 141
Query: 468 IVHGNIKASNILLRPDHDAC---VSDFGLNPLFG-NTTPPTRV--AGYRAPEVVETRKVT 521
IVH ++K NILL C + DFGL+ F NT R+ A Y APEV+ + T
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVL---RGT 198
Query: 522 F--KSDVYSFGVLLLELLTGKAP----------NQASLGEEGIDLPRW 557
+ K DV+S GV+L LL+G P + G+ DLP+W
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQW 246
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 105/228 (46%), Gaps = 31/228 (13%)
Query: 352 EVLGKGSVGTSYKAV-LEEGTTV----VVKRLKEVAVGKREFEMQME--VLGKIKHDNVV 404
+VLG G+ GT YK + + EG V +K L+E K E+ E V+ + + +V
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 405 PLRAFYYSKDEKLLVYDYMPAGSLSALL--HGSRGSGRTPLDWDNRMRIALSAARGLAHL 462
L + +L++ MP G L + H + L+W + A+G+ +L
Sbjct: 84 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 136
Query: 463 HVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAGYRAP------EVVE 516
++VH ++ A N+L++ ++DFGL L G G + P E +
Sbjct: 137 E-DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 517 TRKVTFKSDVYSFGVLLLELLT-GKAPNQ-------ASLGEEGIDLPR 556
R T +SDV+S+GV + EL+T G P +S+ E+G LP+
Sbjct: 196 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 243
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 122/280 (43%), Gaps = 34/280 (12%)
Query: 352 EVLGKGSVGTSYKAVLE----EGTTVVVKRLK--EVAVGKREFEMQMEVLGKIKHDNVVP 405
+V+G G G L+ + +V +K LK +R+F + ++G+ H N++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
L ++V + M GSL + L + T + +R A G+ +L
Sbjct: 111 LEGVVTKSKPVMIVTEXMENGSLDSFLR-KHDAQFTVIQLVGMLR---GIASGMKYLSDM 166
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGL------NPLFGNTTPPTRV-AGYRAPEVVETR 518
G VH ++ A NIL+ + VSDFGL +P TT ++ + +PE + R
Sbjct: 167 GA-VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 519 KVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRY 578
K T SDV+S+G++L E++ S GE P W S + + D E R
Sbjct: 226 KFTSASDVWSYGIVLWEVM--------SYGER----PYWEMS---NQDVIKAVD-EGYRL 269
Query: 579 HNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNR 618
+ L Q+ + C + RP +++V +++ + R
Sbjct: 270 PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 105/228 (46%), Gaps = 31/228 (13%)
Query: 352 EVLGKGSVGTSYKAV-LEEGTTV----VVKRLKEVAVGKREFEMQME--VLGKIKHDNVV 404
+VLG G+ GT YK + + EG V +K L+E K E+ E V+ + + +V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 405 PLRAFYYSKDEKLLVYDYMPAGSLSALL--HGSRGSGRTPLDWDNRMRIALSAARGLAHL 462
L + +L++ MP G L + H + L+W + A+G+ +L
Sbjct: 83 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 135
Query: 463 HVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAGYRAP------EVVE 516
++VH ++ A N+L++ ++DFGL L G G + P E +
Sbjct: 136 E-DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 517 TRKVTFKSDVYSFGVLLLELLT-GKAPNQ-------ASLGEEGIDLPR 556
R T +SDV+S+GV + EL+T G P +S+ E+G LP+
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 242
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 105/228 (46%), Gaps = 31/228 (13%)
Query: 352 EVLGKGSVGTSYKAV-LEEGTTV----VVKRLKEVAVGKREFEMQME--VLGKIKHDNVV 404
+VLG G+ GT YK + + EG V +K L+E K E+ E V+ + + +V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 405 PLRAFYYSKDEKLLVYDYMPAGSLSALL--HGSRGSGRTPLDWDNRMRIALSAARGLAHL 462
L + +L++ MP G L + H + L+W + A+G+ +L
Sbjct: 81 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 133
Query: 463 HVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAGYRAP------EVVE 516
++VH ++ A N+L++ ++DFGL L G G + P E +
Sbjct: 134 E-DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 517 TRKVTFKSDVYSFGVLLLELLT-GKAPNQ-------ASLGEEGIDLPR 556
R T +SDV+S+GV + EL+T G P +S+ E+G LP+
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 240
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 123/290 (42%), Gaps = 44/290 (15%)
Query: 354 LGKGSVGTSYKA----VLEEGT--TVVVKRLKEVAVG--KREFEMQMEVLGKIKHD-NVV 404
LG+G+ G +A + + T TV VK LKE A R ++++L I H NVV
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 405 PLRAFYYSKDEKLLVY-DYMPAGSLSALLHGSRGS---GRTPLDW-------DNRMRIAL 453
L L+V ++ G+LS L R +TP D ++ + +
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 454 SAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAGYR--- 510
A+G+ L S K +H ++ A NILL + + DFGL R R
Sbjct: 156 QVAKGMEFL-ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 214
Query: 511 ---APEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEW 566
APE + R T +SDV+SFGVLL E+ + G +P G+ + EE+
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP------GVK--------IDEEF 260
Query: 567 TAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
+ + MR + ++ Q + C P QRP E+V + N+
Sbjct: 261 CRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 102/216 (47%), Gaps = 44/216 (20%)
Query: 352 EVLGKGSVGTSYKAVLEEGTTVVVKRL--KEVAVGKREFEMQMEVLGKIKHDNVVPLRAF 409
E +GKG G ++ G V VK +E RE E+ V+ ++H+N++
Sbjct: 15 ESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM--LRHENILG---- 67
Query: 410 YYSKDEK--------LLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
+ + D K LV DY GSL L+ R + + +++ALS A GLAH
Sbjct: 68 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN------RYTVTVEGMIKLALSTASGLAH 121
Query: 462 LHV-----SGK--IVHGNIKASNILLRPDHDACVSDFGLNPLFGNTT------PPTRVAG 508
LH+ GK I H ++K+ NIL++ + C++D GL + T P RV
Sbjct: 122 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 181
Query: 509 --YRAPEVVE-----TRKVTFK-SDVYSFGVLLLEL 536
Y APEV++ +FK +D+Y+ G++ E+
Sbjct: 182 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 94/214 (43%), Gaps = 13/214 (6%)
Query: 337 GVYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLG 396
G + D +DL + LG G G V +K +KE ++ + EF + +V+
Sbjct: 17 GSWEIDPKDL--TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMM 74
Query: 397 KIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAA 456
+ H+ +V L + ++ +YM G L L R +T + +
Sbjct: 75 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT----QQLLEMCKDVC 130
Query: 457 RGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRA 511
+ +L S + +H ++ A N L+ VSDFGL+ + + V +
Sbjct: 131 EAMEYLE-SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSP 189
Query: 512 PEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQ 544
PEV+ K + KSD+++FGVL+ E+ + GK P +
Sbjct: 190 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 223
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 124/283 (43%), Gaps = 40/283 (14%)
Query: 352 EVLGKGSVGTSYKAVLE----EGTTVVVKRLKEVAVG-----KREFEMQMEVLGKIKHDN 402
+V+G G G L+ + +V +K LK VG +R+F + ++G+ H N
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK---VGYTEKQRRDFLGEASIMGQFDHPN 78
Query: 403 VVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHL 462
++ L ++V + M GSL + L + T + +R A G+ +L
Sbjct: 79 IIRLEGVVTKSKPVMIVTEXMENGSLDSFLR-KHDAQFTVIQLVGMLR---GIASGMKYL 134
Query: 463 HVSGKIVHGNIKASNILLRPDHDACVSDFGL------NPLFGNTTPPTRV-AGYRAPEVV 515
G VH ++ A NIL+ + VSDFGL +P TT ++ + +PE +
Sbjct: 135 SDMG-YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 193
Query: 516 ETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVEL 575
RK T SDV+S+G++L E++ S GE P W S + + D E
Sbjct: 194 AYRKFTSASDVWSYGIVLWEVM--------SYGER----PYWEMS---NQDVIKAVD-EG 237
Query: 576 MRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNR 618
R + L Q+ + C + RP +++V +++ + R
Sbjct: 238 YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 280
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 105/228 (46%), Gaps = 31/228 (13%)
Query: 352 EVLGKGSVGTSYKAV-LEEG----TTVVVKRLKEVAVGKREFEMQME--VLGKIKHDNVV 404
+VLG G+ GT YK + + EG V +K L+E K E+ E V+ + + +V
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 405 PLRAFYYSKDEKLLVYDYMPAGSLSALL--HGSRGSGRTPLDWDNRMRIALSAARGLAHL 462
L + +L++ MP G L + H + L+W + A+G+ +L
Sbjct: 85 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 137
Query: 463 HVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAGYRAP------EVVE 516
++VH ++ A N+L++ ++DFGL L G G + P E +
Sbjct: 138 E-DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 196
Query: 517 TRKVTFKSDVYSFGVLLLELLT-GKAPNQ-------ASLGEEGIDLPR 556
R T +SDV+S+GV + EL+T G P +S+ E+G LP+
Sbjct: 197 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 244
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 102/216 (47%), Gaps = 44/216 (20%)
Query: 352 EVLGKGSVGTSYKAVLEEGTTVVVKRL--KEVAVGKREFEMQMEVLGKIKHDNVVPLRAF 409
E +GKG G ++ G V VK +E RE E+ V+ ++H+N++
Sbjct: 10 ESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM--LRHENILG---- 62
Query: 410 YYSKDEK--------LLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
+ + D K LV DY GSL L+ R + + +++ALS A GLAH
Sbjct: 63 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN------RYTVTVEGMIKLALSTASGLAH 116
Query: 462 LHV-----SGK--IVHGNIKASNILLRPDHDACVSDFGLNPLFGNTT------PPTRVAG 508
LH+ GK I H ++K+ NIL++ + C++D GL + T P RV
Sbjct: 117 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 176
Query: 509 --YRAPEVVE-----TRKVTFK-SDVYSFGVLLLEL 536
Y APEV++ +FK +D+Y+ G++ E+
Sbjct: 177 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 102/216 (47%), Gaps = 44/216 (20%)
Query: 352 EVLGKGSVGTSYKAVLEEGTTVVVKRL--KEVAVGKREFEMQMEVLGKIKHDNVVPLRAF 409
E +GKG G ++ G V VK +E RE E+ V+ ++H+N++
Sbjct: 12 ESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM--LRHENILG---- 64
Query: 410 YYSKDEK--------LLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
+ + D K LV DY GSL L+ R + + +++ALS A GLAH
Sbjct: 65 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN------RYTVTVEGMIKLALSTASGLAH 118
Query: 462 LHV-----SGK--IVHGNIKASNILLRPDHDACVSDFGLNPLFGNTT------PPTRVAG 508
LH+ GK I H ++K+ NIL++ + C++D GL + T P RV
Sbjct: 119 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 178
Query: 509 --YRAPEVVE-----TRKVTFK-SDVYSFGVLLLEL 536
Y APEV++ +FK +D+Y+ G++ E+
Sbjct: 179 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 103/213 (48%), Gaps = 38/213 (17%)
Query: 352 EVLGKGSVGTSYKAVLEEGTTVVVKRL--KEVAVGKREFEMQMEVLGKIKHDNVVPLRAF 409
E +GKG G ++ G V VK +E RE E+ V+ ++H+N++ A
Sbjct: 35 ESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM--LRHENILGFIAA 91
Query: 410 YYSKD-----EKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
+KD + LV DY GSL L+ R + + +++ALS A GLAHLH+
Sbjct: 92 D-NKDNGTWTQLWLVSDYHEHGSLFDYLN------RYTVTVEGMIKLALSTASGLAHLHM 144
Query: 465 -----SGK--IVHGNIKASNILLRPDHDACVSDFGLNPLFGNTT------PPTRVAG--Y 509
GK I H ++K+ NIL++ + C++D GL + T P RV Y
Sbjct: 145 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 204
Query: 510 RAPEVVE-----TRKVTFK-SDVYSFGVLLLEL 536
APEV++ +FK +D+Y+ G++ E+
Sbjct: 205 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 96/218 (44%), Gaps = 19/218 (8%)
Query: 336 GGVYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVL 395
GG + D +DL + LG G G V +K +KE ++ + EF + +V+
Sbjct: 1 GGSWEIDPKDL--TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVM 58
Query: 396 GKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSA 455
+ H+ +V L + ++ +YM G L L R +T + +
Sbjct: 59 MNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT----QQLLEMCKDV 114
Query: 456 ARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN--------TTPPTRVA 507
+ +L S + +H ++ A N L+ VSDFGL+ + + P R
Sbjct: 115 CEAMEYLE-SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVR-- 171
Query: 508 GYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQ 544
+ PEV+ K + KSD+++FGVL+ E+ + GK P +
Sbjct: 172 -WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 208
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 99/235 (42%), Gaps = 51/235 (21%)
Query: 340 SFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREF---EMQMEVLG 396
S DL++L E++G+G G YK L+E V K + R+ E + +
Sbjct: 9 SLDLDNL--KLLELIGRGRYGAVYKGSLDERPVAV----KVFSFANRQNFINEKNIYRVP 62
Query: 397 KIKHDNVVPL-----RAFYYSKDEKLLVYDYMPAGSLSALL--HGSRGSGRTPLDWDNRM 449
++HDN+ R + E LLV +Y P GSL L H S DW +
Sbjct: 63 LMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS--------DWVSSC 114
Query: 450 RIALSAARGLAHLHVS--------GKIVHGNIKASNILLRPDHDACVSDFGLN-PLFGN- 499
R+A S RGLA+LH I H ++ + N+L++ D +SDFGL+ L GN
Sbjct: 115 RLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNR 174
Query: 500 ----------TTPPTRVAGYRAPEVVE-------TRKVTFKSDVYSFGVLLLELL 537
Y APEV+E + D+Y+ G++ E+
Sbjct: 175 LVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 105/228 (46%), Gaps = 31/228 (13%)
Query: 352 EVLGKGSVGTSYKAV-LEEGTTV----VVKRLKEVAVGKREFEMQME--VLGKIKHDNVV 404
+VLG G+ GT YK + + EG V +K L+E K E+ E V+ + + +V
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 405 PLRAFYYSKDEKLLVYDYMPAGSLSALL--HGSRGSGRTPLDWDNRMRIALSAARGLAHL 462
L + +L++ MP G L + H + L+W + A+G+ +L
Sbjct: 82 RLLGICLTSTVQLIM-QLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 134
Query: 463 HVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAGYRAP------EVVE 516
++VH ++ A N+L++ ++DFGL L G G + P E +
Sbjct: 135 E-DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 193
Query: 517 TRKVTFKSDVYSFGVLLLELLT-GKAPNQ-------ASLGEEGIDLPR 556
R T +SDV+S+GV + EL+T G P +S+ E+G LP+
Sbjct: 194 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 241
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 104/228 (45%), Gaps = 31/228 (13%)
Query: 352 EVLGKGSVGTSYKAV-LEEGTTV----VVKRLKEVAVGKREFEMQME--VLGKIKHDNVV 404
+VLG G+ GT YK + + EG V +K L+E K E+ E V+ + + +V
Sbjct: 46 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 105
Query: 405 PLRAFYYSKDEKLLVYDYMPAGSLSALL--HGSRGSGRTPLDWDNRMRIALSAARGLAHL 462
L + +L+ MP G L + H + L+W + A+G+ +L
Sbjct: 106 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 158
Query: 463 HVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAGYRAP------EVVE 516
++VH ++ A N+L++ ++DFGL L G G + P E +
Sbjct: 159 E-DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 217
Query: 517 TRKVTFKSDVYSFGVLLLELLT-GKAPNQ-------ASLGEEGIDLPR 556
R T +SDV+S+GV + EL+T G P +S+ E+G LP+
Sbjct: 218 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 265
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 122/280 (43%), Gaps = 34/280 (12%)
Query: 352 EVLGKGSVGTSYKAVLE----EGTTVVVKRLK--EVAVGKREFEMQMEVLGKIKHDNVVP 405
+V+G G G L+ + +V +K LK +R+F + ++G+ H N++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
L ++V + M GSL + L + T + +R A G+ +L
Sbjct: 111 LEGVVTKSKPVMIVTEXMENGSLDSFLR-KHDAQFTVIQLVGMLR---GIASGMKYLSDM 166
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGL------NPLFGNTTPPTRV-AGYRAPEVVETR 518
G VH ++ A NIL+ + VSDFGL +P TT ++ + +PE + R
Sbjct: 167 G-YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 519 KVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRY 578
K T SDV+S+G++L E++ S GE P W S + + D E R
Sbjct: 226 KFTSASDVWSYGIVLWEVM--------SYGER----PYWEMS---NQDVIKAVD-EGYRL 269
Query: 579 HNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNR 618
+ L Q+ + C + RP +++V +++ + R
Sbjct: 270 PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 119/285 (41%), Gaps = 44/285 (15%)
Query: 354 LGKGSVGTSYKAVL------EEGTTVVVKRLKEVAVGKR--EFEMQMEVLGKIKHDNVVP 405
LG+GS G Y+ E T V VK + E A + EF + V+ +VV
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSR-----GSGRTPLDWDNRMRIALSAARGLA 460
L L+V + M G L + L R GR P +++A A G+A
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 461 HLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLF---------GNTTPPTRVAGYRA 511
+L+ + K VH N+ A N ++ D + DFG+ G P R + A
Sbjct: 146 YLN-AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR---WMA 201
Query: 512 PEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVF 571
PE ++ T SD++SFGV+L E+ SL E+ Q + E+ V
Sbjct: 202 PESLKDGVFTTSSDMWSFGVVLWEI--------TSLAEQPY------QGLSNEQVLKFVM 247
Query: 572 D-VELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIEN 615
D L + N E + L+++ C P+ RP E+V ++++
Sbjct: 248 DGGYLDQPDNCPERVTDLMRM---CWQFNPNMRPTFLEIVNLLKD 289
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 127/308 (41%), Gaps = 47/308 (15%)
Query: 334 FEGGVYSFDLEDLLRASAEVL---GKGSVGTSYKAVL------EEGTTVVVKRLKEVAVG 384
F VY D ++ R +L G+GS G Y+ E T V VK + E A
Sbjct: 2 FPSSVYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASL 61
Query: 385 KR--EFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSR-----G 437
+ EF + V+ +VV L L+V + M G L + L R
Sbjct: 62 RERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENN 121
Query: 438 SGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLF 497
GR P +++A A G+A+L+ + K VH N+ A N ++ D + DFG+
Sbjct: 122 PGRPPPTLQEMIQMAAEIADGMAYLN-AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDI 180
Query: 498 ---------GNTTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLG 548
G P R + APE ++ T SD++SFGV+L E+ SL
Sbjct: 181 YETDYYRKGGKGLLPVR---WMAPESLKDGVFTTSSDMWSFGVVLWEI--------TSLA 229
Query: 549 EEGIDLPRWVQSVVREEWTAEVFD-VELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQ 607
E+ Q + E+ V D L + N E + L+++ C P+ RP
Sbjct: 230 EQPY------QGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRM---CWQFNPNMRPTFL 280
Query: 608 EVVRMIEN 615
E+V ++++
Sbjct: 281 EIVNLLKD 288
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 104/228 (45%), Gaps = 31/228 (13%)
Query: 352 EVLGKGSVGTSYKAV-LEEGTTV----VVKRLKEVAVGKREFEMQME--VLGKIKHDNVV 404
+VLG G+ GT YK + + EG V +K L+E K E+ E V+ + + +V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 405 PLRAFYYSKDEKLLVYDYMPAGSLSALL--HGSRGSGRTPLDWDNRMRIALSAARGLAHL 462
L + +L+ MP G L + H + L+W + A+G+ +L
Sbjct: 81 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 133
Query: 463 HVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAGYRAP------EVVE 516
++VH ++ A N+L++ ++DFGL L G G + P E +
Sbjct: 134 E-DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 517 TRKVTFKSDVYSFGVLLLELLT-GKAPNQ-------ASLGEEGIDLPR 556
R T +SDV+S+GV + EL+T G P +S+ E+G LP+
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 240
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 102/216 (47%), Gaps = 44/216 (20%)
Query: 352 EVLGKGSVGTSYKAVLEEGTTVVVKRL--KEVAVGKREFEMQMEVLGKIKHDNVVPLRAF 409
E +GKG G ++ G V VK +E RE E+ V+ ++H+N++
Sbjct: 9 ESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM--LRHENILG---- 61
Query: 410 YYSKDEK--------LLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
+ + D K LV DY GSL L+ R + + +++ALS A GLAH
Sbjct: 62 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN------RYTVTVEGMIKLALSTASGLAH 115
Query: 462 LHV-----SGK--IVHGNIKASNILLRPDHDACVSDFGLNPLFGNTT------PPTRVAG 508
LH+ GK I H ++K+ NIL++ + C++D GL + T P RV
Sbjct: 116 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 175
Query: 509 --YRAPEVVE-----TRKVTFK-SDVYSFGVLLLEL 536
Y APEV++ +FK +D+Y+ G++ E+
Sbjct: 176 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 103/213 (48%), Gaps = 38/213 (17%)
Query: 352 EVLGKGSVGTSYKAVLEEGTTVVVKRL--KEVAVGKREFEMQMEVLGKIKHDNVVPLRAF 409
E +GKG G ++ G V VK +E RE E+ V+ ++H+N++ A
Sbjct: 48 ESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM--LRHENILGFIAA 104
Query: 410 YYSKD-----EKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
+KD + LV DY GSL L+ R + + +++ALS A GLAHLH+
Sbjct: 105 D-NKDNGTWTQLWLVSDYHEHGSLFDYLN------RYTVTVEGMIKLALSTASGLAHLHM 157
Query: 465 -----SGK--IVHGNIKASNILLRPDHDACVSDFGLNPLFGNTT------PPTRVAG--Y 509
GK I H ++K+ NIL++ + C++D GL + T P RV Y
Sbjct: 158 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 217
Query: 510 RAPEVVE-----TRKVTFK-SDVYSFGVLLLEL 536
APEV++ +FK +D+Y+ G++ E+
Sbjct: 218 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 104/228 (45%), Gaps = 31/228 (13%)
Query: 352 EVLGKGSVGTSYKAV-LEEGTTV----VVKRLKEVAVGKREFEMQME--VLGKIKHDNVV 404
+VLG G+ GT YK + + EG V +K L+E K E+ E V+ + + +V
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 405 PLRAFYYSKDEKLLVYDYMPAGSLSALL--HGSRGSGRTPLDWDNRMRIALSAARGLAHL 462
L + +L+ MP G L + H + L+W + A+G+ +L
Sbjct: 84 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 136
Query: 463 HVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAGYRAP------EVVE 516
++VH ++ A N+L++ ++DFGL L G G + P E +
Sbjct: 137 E-DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 517 TRKVTFKSDVYSFGVLLLELLT-GKAPNQ-------ASLGEEGIDLPR 556
R T +SDV+S+GV + EL+T G P +S+ E+G LP+
Sbjct: 196 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 243
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 104/228 (45%), Gaps = 31/228 (13%)
Query: 352 EVLGKGSVGTSYKAV-LEEGTTV----VVKRLKEVAVGKREFEMQME--VLGKIKHDNVV 404
+VLG G+ GT YK + + EG V +K L+E K E+ E V+ + + +V
Sbjct: 31 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 90
Query: 405 PLRAFYYSKDEKLLVYDYMPAGSLSALL--HGSRGSGRTPLDWDNRMRIALSAARGLAHL 462
L + +L+ MP G L + H + L+W + A+G+ +L
Sbjct: 91 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 143
Query: 463 HVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAGYRAP------EVVE 516
++VH ++ A N+L++ ++DFGL L G G + P E +
Sbjct: 144 E-DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 202
Query: 517 TRKVTFKSDVYSFGVLLLELLT-GKAPNQ-------ASLGEEGIDLPR 556
R T +SDV+S+GV + EL+T G P +S+ E+G LP+
Sbjct: 203 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 250
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 104/228 (45%), Gaps = 31/228 (13%)
Query: 352 EVLGKGSVGTSYKAV-LEEGTTV----VVKRLKEVAVGKREFEMQME--VLGKIKHDNVV 404
+VLG G+ GT YK + + EG V +K L+E K E+ E V+ + + +V
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 405 PLRAFYYSKDEKLLVYDYMPAGSLSALL--HGSRGSGRTPLDWDNRMRIALSAARGLAHL 462
L + +L+ MP G L + H + L+W + A+G+ +L
Sbjct: 84 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 136
Query: 463 HVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAGYRAP------EVVE 516
++VH ++ A N+L++ ++DFGL L G G + P E +
Sbjct: 137 E-DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 517 TRKVTFKSDVYSFGVLLLELLT-GKAPNQ-------ASLGEEGIDLPR 556
R T +SDV+S+GV + EL+T G P +S+ E+G LP+
Sbjct: 196 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 243
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 104/228 (45%), Gaps = 31/228 (13%)
Query: 352 EVLGKGSVGTSYKAV-LEEGTTV----VVKRLKEVAVGKREFEMQME--VLGKIKHDNVV 404
+VLG G+ GT YK + + EG V +K L+E K E+ E V+ + + +V
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 405 PLRAFYYSKDEKLLVYDYMPAGSLSALL--HGSRGSGRTPLDWDNRMRIALSAARGLAHL 462
L + +L+ MP G L + H + L+W + A+G+ +L
Sbjct: 84 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 136
Query: 463 HVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAGYRAP------EVVE 516
++VH ++ A N+L++ ++DFGL L G G + P E +
Sbjct: 137 E-DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 517 TRKVTFKSDVYSFGVLLLELLT-GKAPNQ-------ASLGEEGIDLPR 556
R T +SDV+S+GV + EL+T G P +S+ E+G LP+
Sbjct: 196 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 243
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 104/228 (45%), Gaps = 31/228 (13%)
Query: 352 EVLGKGSVGTSYKAV-LEEGTTV----VVKRLKEVAVGKREFEMQME--VLGKIKHDNVV 404
+VLG G+ GT YK + + EG V +K L+E K E+ E V+ + + +V
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 405 PLRAFYYSKDEKLLVYDYMPAGSLSALL--HGSRGSGRTPLDWDNRMRIALSAARGLAHL 462
L + +L+ MP G L + H + L+W + A+G+ +L
Sbjct: 88 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 140
Query: 463 HVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAGYRAP------EVVE 516
++VH ++ A N+L++ ++DFGL L G G + P E +
Sbjct: 141 E-DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 517 TRKVTFKSDVYSFGVLLLELLT-GKAPNQ-------ASLGEEGIDLPR 556
R T +SDV+S+GV + EL+T G P +S+ E+G LP+
Sbjct: 200 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 247
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 104/228 (45%), Gaps = 31/228 (13%)
Query: 352 EVLGKGSVGTSYKAV-LEEGTTV----VVKRLKEVAVGKREFEMQME--VLGKIKHDNVV 404
+VLG G+ GT YK + + EG V +K L+E K E+ E V+ + + +V
Sbjct: 15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 74
Query: 405 PLRAFYYSKDEKLLVYDYMPAGSLSALL--HGSRGSGRTPLDWDNRMRIALSAARGLAHL 462
L + +L+ MP G L + H + L+W + A+G+ +L
Sbjct: 75 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 127
Query: 463 HVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAGYRAP------EVVE 516
++VH ++ A N+L++ ++DFGL L G G + P E +
Sbjct: 128 E-DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 186
Query: 517 TRKVTFKSDVYSFGVLLLELLT-GKAPNQ-------ASLGEEGIDLPR 556
R T +SDV+S+GV + EL+T G P +S+ E+G LP+
Sbjct: 187 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 234
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 104/228 (45%), Gaps = 31/228 (13%)
Query: 352 EVLGKGSVGTSYKAV-LEEGTTV----VVKRLKEVAVGKREFEMQME--VLGKIKHDNVV 404
+VLG G+ GT YK + + EG V +K L+E K E+ E V+ + + +V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 405 PLRAFYYSKDEKLLVYDYMPAGSLSALL--HGSRGSGRTPLDWDNRMRIALSAARGLAHL 462
L + +L+ MP G L + H + L+W + A+G+ +L
Sbjct: 83 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 135
Query: 463 HVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAGYRAP------EVVE 516
++VH ++ A N+L++ ++DFGL L G G + P E +
Sbjct: 136 E-DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 517 TRKVTFKSDVYSFGVLLLELLT-GKAPNQ-------ASLGEEGIDLPR 556
R T +SDV+S+GV + EL+T G P +S+ E+G LP+
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 242
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 104/228 (45%), Gaps = 31/228 (13%)
Query: 352 EVLGKGSVGTSYKAV-LEEGTTV----VVKRLKEVAVGKREFEMQME--VLGKIKHDNVV 404
+VLG G+ GT YK + + EG V +K L+E K E+ E V+ + + +V
Sbjct: 27 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 86
Query: 405 PLRAFYYSKDEKLLVYDYMPAGSLSALL--HGSRGSGRTPLDWDNRMRIALSAARGLAHL 462
L + +L+ MP G L + H + L+W + A+G+ +L
Sbjct: 87 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 139
Query: 463 HVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAGYRAP------EVVE 516
++VH ++ A N+L++ ++DFGL L G G + P E +
Sbjct: 140 E-DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 198
Query: 517 TRKVTFKSDVYSFGVLLLELLT-GKAPNQ-------ASLGEEGIDLPR 556
R T +SDV+S+GV + EL+T G P +S+ E+G LP+
Sbjct: 199 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 246
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 94/214 (43%), Gaps = 13/214 (6%)
Query: 337 GVYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLG 396
G + D +DL + LG G G V +K +KE ++ + EF + +V+
Sbjct: 17 GSWEIDPKDL--TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMM 74
Query: 397 KIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAA 456
+ H+ +V L + ++ +YM G L L R +T + +
Sbjct: 75 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT----QQLLEMCKDVC 130
Query: 457 RGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRA 511
+ +L S + +H ++ A N L+ VSDFGL+ + + V +
Sbjct: 131 EAMEYLE-SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP 189
Query: 512 PEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQ 544
PEV+ K + KSD+++FGVL+ E+ + GK P +
Sbjct: 190 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 223
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 104/228 (45%), Gaps = 31/228 (13%)
Query: 352 EVLGKGSVGTSYKAV-LEEGTTV----VVKRLKEVAVGKREFEMQME--VLGKIKHDNVV 404
+VLG G+ GT YK + + EG V +K L+E K E+ E V+ + + +V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 405 PLRAFYYSKDEKLLVYDYMPAGSLSALL--HGSRGSGRTPLDWDNRMRIALSAARGLAHL 462
L + +L+ MP G L + H + L+W + A+G+ +L
Sbjct: 81 RLLGICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 133
Query: 463 HVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAGYRAP------EVVE 516
++VH ++ A N+L++ ++DFGL L G G + P E +
Sbjct: 134 E-DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 517 TRKVTFKSDVYSFGVLLLELLT-GKAPNQ-------ASLGEEGIDLPR 556
R T +SDV+S+GV + EL+T G P +S+ E+G LP+
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 240
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 104/228 (45%), Gaps = 31/228 (13%)
Query: 352 EVLGKGSVGTSYKAV-LEEGTTV----VVKRLKEVAVGKREFEMQME--VLGKIKHDNVV 404
+VLG G+ GT YK + + EG V +K L+E K E+ E V+ + + +V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 405 PLRAFYYSKDEKLLVYDYMPAGSLSALL--HGSRGSGRTPLDWDNRMRIALSAARGLAHL 462
L + +L+ MP G L + H + L+W + A+G+ +L
Sbjct: 81 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 133
Query: 463 HVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAGYRAP------EVVE 516
++VH ++ A N+L++ ++DFGL L G G + P E +
Sbjct: 134 E-DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 517 TRKVTFKSDVYSFGVLLLELLT-GKAPNQ-------ASLGEEGIDLPR 556
R T +SDV+S+GV + EL+T G P +S+ E+G LP+
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 240
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 94/214 (43%), Gaps = 13/214 (6%)
Query: 337 GVYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLG 396
G + D +DL + LG G G V +K +KE ++ + EF + +V+
Sbjct: 2 GSWEIDPKDL--TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMM 59
Query: 397 KIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAA 456
+ H+ +V L + ++ +YM G L L R +T + +
Sbjct: 60 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT----QQLLEMCKDVC 115
Query: 457 RGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRA 511
+ +L S + +H ++ A N L+ VSDFGL+ + + V +
Sbjct: 116 EAMEYLE-SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP 174
Query: 512 PEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQ 544
PEV+ K + KSD+++FGVL+ E+ + GK P +
Sbjct: 175 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 208
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 99/228 (43%), Gaps = 31/228 (13%)
Query: 352 EVLGKGSVGTSYKAVLEE----GTTVVVKRLKEVAVGKRE--FEMQMEVLGKIKHDNVVP 405
E LG G+ + VL E G VK + + A+ +E E ++ VL KIKH+N+V
Sbjct: 28 ETLGTGAFS---EVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVA 84
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
L Y S + LV + G L + T D +R L A + +LH
Sbjct: 85 LEDIYESPNHLYLVMQLVSGGELFDRI--VEKGFYTEKDASTLIRQVLDA---VYYLHRM 139
Query: 466 GKIVHGNIKASNILLRPDHDAC---VSDFGLNPLFGN---TTPPTRVAGYRAPEVVETRK 519
G IVH ++K N+L + +SDFGL+ + G + GY APEV+ +
Sbjct: 140 G-IVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKP 198
Query: 520 VTFKSDVYSFGVLLLELLTGKAP----NQASLGEE------GIDLPRW 557
+ D +S GV+ LL G P N + L E+ D P W
Sbjct: 199 YSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYW 246
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 125/282 (44%), Gaps = 49/282 (17%)
Query: 352 EVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRA-- 408
E++G G G +KA +G T V+KR+K + E +++ L K+ H N+V
Sbjct: 17 ELIGSGGFGQVFKAKHRIDGKTYVIKRVK---YNNEKAEREVKALAKLDHVNIVHYNGCW 73
Query: 409 --FYY-----------SKDEKLLV-YDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALS 454
F Y SK + L + ++ G+L + RG LD + +
Sbjct: 74 DGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE---KLDKVLALELFEQ 130
Query: 455 AARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG---YRA 511
+G+ ++H S K+++ ++K SNI L + DFGL N R G Y +
Sbjct: 131 ITKGVDYIH-SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSKGTLRYMS 189
Query: 512 PEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVF 571
PE + ++ + D+Y+ G++L ELL + + + ++ +R+ +++F
Sbjct: 190 PEQISSQDYGKEVDLYALGLILAELL--------HVCDTAFETSKFFTD-LRDGIISDIF 240
Query: 572 DVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMI 613
D + E+ ++Q L +S P+ RP E++R +
Sbjct: 241 DKK-------EKTLLQKL------LSKKPEDRPNTSEILRTL 269
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 94/214 (43%), Gaps = 13/214 (6%)
Query: 337 GVYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLG 396
G + D +DL + LG G G V +K +KE ++ + EF + +V+
Sbjct: 1 GSWEIDPKDL--TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMM 58
Query: 397 KIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAA 456
+ H+ +V L + ++ +YM G L L R +T + +
Sbjct: 59 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT----QQLLEMCKDVC 114
Query: 457 RGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRA 511
+ +L S + +H ++ A N L+ VSDFGL+ + + V +
Sbjct: 115 EAMEYLE-SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP 173
Query: 512 PEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQ 544
PEV+ K + KSD+++FGVL+ E+ + GK P +
Sbjct: 174 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 207
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 94/214 (43%), Gaps = 13/214 (6%)
Query: 337 GVYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLG 396
G + D +DL + LG G G V +K +KE ++ + EF + +V+
Sbjct: 8 GSWEIDPKDL--TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMM 65
Query: 397 KIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAA 456
+ H+ +V L + ++ +YM G L L R +T + +
Sbjct: 66 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT----QQLLEMCKDVC 121
Query: 457 RGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRA 511
+ +L S + +H ++ A N L+ VSDFGL+ + + V +
Sbjct: 122 EAMEYLE-SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP 180
Query: 512 PEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQ 544
PEV+ K + KSD+++FGVL+ E+ + GK P +
Sbjct: 181 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 214
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 103/215 (47%), Gaps = 14/215 (6%)
Query: 339 YSFDLEDLLRASAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAVGKREFEMQMEVLGK 397
+ F EDL + E+ G+G+ G+ K V + G + VKR++ K + ++ M++
Sbjct: 17 WDFTAEDL-KDLGEI-GRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVV 74
Query: 398 IKHDNVVPLRAFY---YSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALS 454
++ + + FY + + + + + M + S + + +I L+
Sbjct: 75 MRSSDCPYIVQFYGALFREGDCWICMELM-STSFDKFYKYVYSVLDDVIPEEILGKITLA 133
Query: 455 AARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG---YRA 511
+ L HL + KI+H +IK SNILL + + DFG++ ++ TR AG Y A
Sbjct: 134 TVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMA 193
Query: 512 PEVVE----TRKVTFKSDVYSFGVLLLELLTGKAP 542
PE ++ + +SDV+S G+ L EL TG+ P
Sbjct: 194 PERIDPSASRQGYDVRSDVWSLGITLYELATGRFP 228
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 127/290 (43%), Gaps = 47/290 (16%)
Query: 354 LGKGSVGTSYKA----VLEEGT--TVVVKRLKEVAVG--KREFEMQMEVLGKIKHD-NVV 404
LG+G+ G +A + + T TV VK LKE A R ++++L I H NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 405 PLRAFYYSKDEKLLVY-DYMPAGSLSALLHGSRGS-------GRTPLDWDNRMRIALSAA 456
L L+V ++ G+LS L R + L ++ + + A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 457 RGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL------NPLF---GNTTPPTRVA 507
+G+ L S K +H ++ A NILL + + DFGL +P + G+ P +
Sbjct: 155 KGMEFL-ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK-- 211
Query: 508 GYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEW 566
+ APE + R T +SDV+SFGVLL E+ + G +P G+ + EE+
Sbjct: 212 -WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP------GVK--------IDEEF 256
Query: 567 TAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
+ + MR + ++ Q + C P QRP E+V + N+
Sbjct: 257 CRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNL 304
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 127/290 (43%), Gaps = 47/290 (16%)
Query: 354 LGKGSVGTSYKA----VLEEGT--TVVVKRLKEVAVG--KREFEMQMEVLGKIKHD-NVV 404
LG+G+ G +A + + T TV VK LKE A R ++++L I H NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 405 PLRAFYYSKDEKLLVY-DYMPAGSLSALLHGSRGS-------GRTPLDWDNRMRIALSAA 456
L L+V ++ G+LS L R + L ++ + + A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 457 RGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL------NPLF---GNTTPPTRVA 507
+G+ L S K +H ++ A NILL + + DFGL +P + G+ P +
Sbjct: 155 KGMEFL-ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLK-- 211
Query: 508 GYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEW 566
+ APE + R T +SDV+SFGVLL E+ + G +P G+ + EE+
Sbjct: 212 -WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP------GVK--------IDEEF 256
Query: 567 TAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
+ + MR + ++ Q + C P QRP E+V + N+
Sbjct: 257 XRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNL 304
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 96/228 (42%), Gaps = 33/228 (14%)
Query: 353 VLGKGSVGTSYKA----VLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRA 408
+LGKGS G K +E V+ + ++E+L K+ H N++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 409 FYYSKDEKLLVYDYMPAGSL-SALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGK 467
+V + G L ++ R S + RI G+ ++H
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEH------DAARIIKQVFSGITYMH-KHN 141
Query: 468 IVHGNIKASNILLRPDHDAC---VSDFGLNPLFG-NTTPPTRV--AGYRAPEVVETRKVT 521
IVH ++K NILL C + DFGL+ F NT R+ A Y APEV+ + T
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVL---RGT 198
Query: 522 F--KSDVYSFGVLLLELLTGKAP----------NQASLGEEGIDLPRW 557
+ K DV+S GV+L LL+G P + G+ DLP+W
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQW 246
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 110/243 (45%), Gaps = 26/243 (10%)
Query: 312 TSSSKDDITGGAAEADRNKLVFFEGGVYSFDLEDLLRASAEVLGKGSVGTSYKAVLEE-- 369
TS+ DI A D + +G V SF + E+LG G G +K EE
Sbjct: 59 TSALAVDIPAPPAPFDHRIVTAKQGAVNSF----YTVSKTEILGGGRFGQVHKC--EETA 112
Query: 370 -GTTVVVKRLKEVAV-GKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGS 427
G + K +K + K E + ++ V+ ++ H N++ L + SK++ +LV +Y+ G
Sbjct: 113 TGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGE 172
Query: 428 LSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILL--RPDHD 485
L + T LD M+ G+ H+H I+H ++K NIL R
Sbjct: 173 LFDRI-IDESYNLTELDTILFMK---QICEGIRHMH-QMYILHLDLKPENILCVNRDAKQ 227
Query: 486 ACVSDFGLNPLFGNTTPPTRVA------GYRAPEVVETRKVTFKSDVYSFGVLLLELLTG 539
+ DFGL + P ++ + APEVV V+F +D++S GV+ LL+G
Sbjct: 228 IKIIDFGLARRY---KPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSG 284
Query: 540 KAP 542
+P
Sbjct: 285 LSP 287
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 26/210 (12%)
Query: 352 EVLGKGSVGTSYKAVLEE-GTTVVVKRLK-EVAVGKRE-FEMQMEVLGKIKHDNVVPLRA 408
E LG G G + + ++ G V +K+ + E++ RE + ++++++ K+ H NVV R
Sbjct: 21 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSARE 80
Query: 409 F------YYSKDEKLLVYDYMPAGSLSALLH---GSRGSGRTPLDWDNRMRIALS-AARG 458
D LL +Y G L L+ G P+ R LS +
Sbjct: 81 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPI------RTLLSDISSA 134
Query: 459 LAHLHVSGKIVHGNIKASNILLRPDHDACVS---DFGLNPLFGNTTPPTRVAG---YRAP 512
L +LH +I+H ++K NI+L+P + D G T G Y AP
Sbjct: 135 LRYLH-ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAP 193
Query: 513 EVVETRKVTFKSDVYSFGVLLLELLTGKAP 542
E++E +K T D +SFG L E +TG P
Sbjct: 194 ELLEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 96/228 (42%), Gaps = 33/228 (14%)
Query: 353 VLGKGSVGTSYKA----VLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRA 408
+LGKGS G K +E V+ + ++E+L K+ H N++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 409 FYYSKDEKLLVYDYMPAGSL-SALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGK 467
+V + G L ++ R S + RI G+ ++H
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEH------DAARIIKQVFSGITYMH-KHN 141
Query: 468 IVHGNIKASNILLRPDHDAC---VSDFGLNPLFG-NTTPPTRV--AGYRAPEVVETRKVT 521
IVH ++K NILL C + DFGL+ F NT R+ A Y APEV+ + T
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVL---RGT 198
Query: 522 F--KSDVYSFGVLLLELLTGKAP----------NQASLGEEGIDLPRW 557
+ K DV+S GV+L LL+G P + G+ DLP+W
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQW 246
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 100/219 (45%), Gaps = 18/219 (8%)
Query: 344 EDLLRASAEVLGKGSVGTSYKAVL---EEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKH 400
++LL A E LG G+ G+ + V ++ V +K LK+ EM E +
Sbjct: 335 DNLLIADIE-LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL 393
Query: 401 DNVVPLRAFYYSKDEKL-LVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGL 459
DN +R + E L LV + G L L G R + N + + G+
Sbjct: 394 DNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREE----IPVSNVAELLHQVSMGM 449
Query: 460 AHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFG--NTTPPTRVAG-----YRAP 512
+L VH N+ A N+LL H A +SDFGL+ G ++ R AG + AP
Sbjct: 450 KYLE-EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAP 508
Query: 513 EVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEE 550
E + RK + +SDV+S+GV + E L+ G+ P + G E
Sbjct: 509 ECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE 547
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 87/197 (44%), Gaps = 11/197 (5%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSK 413
LG G G V +K +KE ++ + EF + +V+ + H+ +V L +
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 71
Query: 414 DEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNI 473
++ +YM G L L R +T + + + +L S + +H ++
Sbjct: 72 RPIFIITEYMANGCLLNYLREMRHRFQT----QQLLEMCKDVCEAMEYLE-SKQFLHRDL 126
Query: 474 KASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVTFKSDVYS 528
A N L+ VSDFGL+ + + V + PEV+ K + KSD+++
Sbjct: 127 AARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 186
Query: 529 FGVLLLELLT-GKAPNQ 544
FGVL+ E+ + GK P +
Sbjct: 187 FGVLMWEIYSLGKMPYE 203
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 124/302 (41%), Gaps = 48/302 (15%)
Query: 343 LEDLLRASAE-----VLGKGSVGTSYKAVL--EEGT--TVVVKRLKEVAVGK---REFEM 390
LED+L + +LGKG G+ +A L E+G+ V VK LK + EF
Sbjct: 15 LEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLR 74
Query: 391 QMEVLGKIKHDNVVPLRAFYYSKDEK------LLVYDYMPAGSLSALLHGSR-GSGRTPL 443
+ + + H +V L K +++ +M G L A L SR G L
Sbjct: 75 EAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNL 134
Query: 444 DWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLN------PLF 497
+R + A G+ +L S +H ++ A N +L D CV+DFGL+ +
Sbjct: 135 PLQTLVRFMVDIACGMEYLS-SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYY 193
Query: 498 GNTTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPR 556
+ A E + T SDV++FGV + E++T G+ P GI+
Sbjct: 194 RQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYA------GIE--- 244
Query: 557 WVQSVVREEWTAEVFDVEL--MRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIE 614
AE+++ + R E M ++ + C S P QRP+ + +E
Sbjct: 245 ----------NAEIYNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELE 294
Query: 615 NM 616
N+
Sbjct: 295 NI 296
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 26/210 (12%)
Query: 352 EVLGKGSVGTSYKAVLEE-GTTVVVKRLK-EVAVGKRE-FEMQMEVLGKIKHDNVVPLRA 408
E LG G G + + ++ G V +K+ + E++ RE + ++++++ K+ H NVV R
Sbjct: 20 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSARE 79
Query: 409 F------YYSKDEKLLVYDYMPAGSLSALLH---GSRGSGRTPLDWDNRMRIALS-AARG 458
D LL +Y G L L+ G P+ R LS +
Sbjct: 80 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPI------RTLLSDISSA 133
Query: 459 LAHLHVSGKIVHGNIKASNILLRPDHDACVS---DFGLNPLFGNTTPPTRVAG---YRAP 512
L +LH +I+H ++K NI+L+P + D G T G Y AP
Sbjct: 134 LRYLH-ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAP 192
Query: 513 EVVETRKVTFKSDVYSFGVLLLELLTGKAP 542
E++E +K T D +SFG L E +TG P
Sbjct: 193 ELLEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 103/228 (45%), Gaps = 31/228 (13%)
Query: 352 EVLGKGSVGTSYKAV-LEEGTTV----VVKRLKEVAVGKREFEMQME--VLGKIKHDNVV 404
+VLG G+ GT YK + + EG V +K L+E K E+ E V+ + + +V
Sbjct: 18 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 77
Query: 405 PLRAFYYSKDEKLLVYDYMPAGSLSALL--HGSRGSGRTPLDWDNRMRIALSAARGLAHL 462
L + +L+ MP G L + H + L+W + A G+ +L
Sbjct: 78 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAEGMNYL 130
Query: 463 HVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAGYRAP------EVVE 516
++VH ++ A N+L++ ++DFGL L G G + P E +
Sbjct: 131 E-DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 189
Query: 517 TRKVTFKSDVYSFGVLLLELLT-GKAPNQ-------ASLGEEGIDLPR 556
R T +SDV+S+GV + EL+T G P +S+ E+G LP+
Sbjct: 190 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 237
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 127/308 (41%), Gaps = 47/308 (15%)
Query: 334 FEGGVYSFDLEDLLRASAEVL---GKGSVGTSYKAVL------EEGTTVVVKRLKEVAVG 384
F VY D ++ R +L G+GS G Y+ E T V VK + E A
Sbjct: 2 FPSSVYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASL 61
Query: 385 KR--EFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSR-----G 437
+ EF + V+ +VV L L+V + M G L + L R
Sbjct: 62 RERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENN 121
Query: 438 SGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLF 497
GR P +++A A G+A+L+ + K VH ++ A N ++ D + DFG+
Sbjct: 122 PGRPPPTLQEMIQMAAEIADGMAYLN-AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI 180
Query: 498 GNTTP---------PTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLG 548
T P R + APE ++ T SD++SFGV+L E+ SL
Sbjct: 181 XETDXXRKGGKGLLPVR---WMAPESLKDGVFTTSSDMWSFGVVLWEI--------TSLA 229
Query: 549 EEGIDLPRWVQSVVREEWTAEVFD-VELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQ 607
E+ Q + E+ V D L + N E + L+++ C P+ RP
Sbjct: 230 EQPY------QGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRM---CWQFNPNMRPTFL 280
Query: 608 EVVRMIEN 615
E+V ++++
Sbjct: 281 EIVNLLKD 288
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 99/222 (44%), Gaps = 28/222 (12%)
Query: 343 LEDLLRASAEVLGKGSVGTSYKAV-LEEGTTVVVKRL-KEVAVGKREFEMQMEVLGKIK- 399
ED+ + ++E+LG+G+ AV L+ G VK + K+ + ++E L + +
Sbjct: 10 FEDMYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQG 69
Query: 400 HDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGL 459
+ N++ L F+ LV++ + GS+ A + + + R+ A L
Sbjct: 70 NKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKH-----FNEREASRVVRDVAAAL 124
Query: 460 AHLHVSGKIVHGNIKASNILLRPDHDAC---VSDFGL-------NPLFGNTTP----PTR 505
LH G I H ++K NIL + DF L N TTP P
Sbjct: 125 DFLHTKG-IAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCG 183
Query: 506 VAGYRAPEVVE--TRKVTF---KSDVYSFGVLLLELLTGKAP 542
A Y APEVVE T + TF + D++S GV+L +L+G P
Sbjct: 184 SAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPP 225
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 119/288 (41%), Gaps = 42/288 (14%)
Query: 351 AEVLGKGSVGTSYKAVL--EEGTT--VVVKRLKEVAVGKREFE---MQMEVLGKIKHDNV 403
++LG+G G+ + L E+GT+ V VK +K +RE E + + H NV
Sbjct: 39 GKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNV 98
Query: 404 VPLRAFYYSKDEK-----LLVYDYMPAGSLSALLHGSR---GSGRTPLDWDNRMRIALSA 455
+ L + +++ +M G L L SR G PL ++ +
Sbjct: 99 IRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQ--TLLKFMVDI 156
Query: 456 ARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLF--GNTTPPTRVA----GY 509
A G+ +L + +H ++ A N +LR D CV+DFGL+ G+ R+A +
Sbjct: 157 ALGMEYLS-NRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKW 215
Query: 510 RAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTA 568
A E + R T KSDV++FGV + E+ T G P E D
Sbjct: 216 IAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYD--------------- 260
Query: 569 EVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
+ + R E+ + +L +I C T P RP + +E +
Sbjct: 261 --YLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKL 306
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 125/299 (41%), Gaps = 48/299 (16%)
Query: 354 LGKGSVGTSYKAVL------EEGTTVVVKRLKEVAVGKR--EFEMQMEVLGKIKHDNVVP 405
LG+GS G Y+ V E T V +K + E A + EF + V+ + +VV
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 77
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGR-----TPLDWDNRMRIALSAARGLA 460
L L++ + M G L + L R P +++A A G+A
Sbjct: 78 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 137
Query: 461 HLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTP---------PTRVAGYRA 511
+L+ + K VH ++ A N ++ D + DFG+ T P R + +
Sbjct: 138 YLN-ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR---WMS 193
Query: 512 PEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEV 570
PE ++ T SDV+SFGV+L E+ T + P Q E+ V+R +
Sbjct: 194 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ----------VLRFVMEGGL 243
Query: 571 FDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGETDDGLRQSS 629
D + N + +++L+++ C P RP+ E++ I+ E + G R+ S
Sbjct: 244 LD----KPDNCPDMLLELMRM---CWQYNPKMRPSFLEIISSIKE----EMEPGFREVS 291
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 135/334 (40%), Gaps = 51/334 (15%)
Query: 322 GAAEADRNKLVFFEGGVYSFDLEDLLRASAEV---LGKGSVGTSYKAVL------EEGTT 372
G A N F VY D ++ R + LG+GS G Y+ V E T
Sbjct: 20 GVLYASVNPEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR 79
Query: 373 VVVKRLKEVAVGKR--EFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSA 430
V +K + E A + EF + V+ + +VV L L++ + M G L +
Sbjct: 80 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 139
Query: 431 LLHGSRGSGR-----TPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHD 485
L R P +++A A G+A+L+ + K VH ++ A N ++ D
Sbjct: 140 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN-ANKFVHRDLAARNCMVAEDFT 198
Query: 486 ACVSDFGLNPLF---------GNTTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLEL 536
+ DFG+ G P R + +PE ++ T SDV+SFGV+L E+
Sbjct: 199 VKIGDFGMTRDIYETDYYRKGGKGLLPVR---WMSPESLKDGVFTTYSDVWSFGVVLWEI 255
Query: 537 LT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGC 595
T + P Q E+ V+R + D + N + + +L+++ C
Sbjct: 256 ATLAEQPYQGLSNEQ----------VLRFVMEGGLLD----KPDNCPDMLFELMRM---C 298
Query: 596 VSTVPDQRPAMQEVVRMIENMNRGETDDGLRQSS 629
P RP+ E++ I+ E + G R+ S
Sbjct: 299 WQYNPKMRPSFLEIISSIKE----EMEPGFREVS 328
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 101/219 (46%), Gaps = 18/219 (8%)
Query: 344 EDLLRASAEVLGKGSVGTSYKAVL---EEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKH 400
++LL A E LG G+ G+ + V ++ V +K LK+ EM E +
Sbjct: 9 DNLLIADIE-LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL 67
Query: 401 DNVVPLRAFYYSKDEKL-LVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGL 459
DN +R + E L LV + G L L G R P+ N + + G+
Sbjct: 68 DNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREE--IPVS--NVAELLHQVSMGM 123
Query: 460 AHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFG--NTTPPTRVAG-----YRAP 512
+L VH ++ A N+LL H A +SDFGL+ G ++ R AG + AP
Sbjct: 124 KYLE-EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAP 182
Query: 513 EVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEE 550
E + RK + +SDV+S+GV + E L+ G+ P + G E
Sbjct: 183 ECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE 221
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 70/157 (44%), Gaps = 7/157 (4%)
Query: 391 QMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMR 450
+ ++L K+ VV L Y +KD LV M G L ++ G+ +
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHM---GQAGFPEARAVF 290
Query: 451 IALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLN---PLFGNTTPPTRVA 507
A GL LH +IV+ ++K NILL +SD GL P
Sbjct: 291 YAAEICCGLEDLHRE-RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTV 349
Query: 508 GYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQ 544
GY APEVV+ + TF D ++ G LL E++ G++P Q
Sbjct: 350 GYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQ 386
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 70/157 (44%), Gaps = 7/157 (4%)
Query: 391 QMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMR 450
+ ++L K+ VV L Y +KD LV M G L ++ G+ +
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHM---GQAGFPEARAVF 290
Query: 451 IALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLN---PLFGNTTPPTRVA 507
A GL LH +IV+ ++K NILL +SD GL P
Sbjct: 291 YAAEICCGLEDLHRE-RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTV 349
Query: 508 GYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQ 544
GY APEVV+ + TF D ++ G LL E++ G++P Q
Sbjct: 350 GYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQ 386
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 121/289 (41%), Gaps = 43/289 (14%)
Query: 354 LGKGSVGTSYKA----VLEEGT--TVVVKRLKEVAVG--KREFEMQMEVLGKIKHD-NVV 404
LG+G+ G +A + + T TV VK LKE A R ++++L I H NVV
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 405 PLRAFYYSKDEKLLVY-DYMPAGSLSALLHGSRGS---------GRTPLDWDNRMRIALS 454
L L+V ++ G+LS L R + L ++ + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 455 AARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAGYR---- 510
A+G+ L S K +H ++ A NILL + + DFGL R R
Sbjct: 157 VAKGMEFL-ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK 215
Query: 511 --APEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWT 567
APE + R T +SDV+SFGVLL E+ + G +P G+ + EE+
Sbjct: 216 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP------GVK--------IDEEFC 261
Query: 568 AEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
+ + MR + ++ Q + C P QRP E+V + N+
Sbjct: 262 RRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 124/299 (41%), Gaps = 48/299 (16%)
Query: 354 LGKGSVGTSYKAVL------EEGTTVVVKRLKEVAVGKR--EFEMQMEVLGKIKHDNVVP 405
LG+GS G Y+ V E T V +K + E A + EF + V+ + +VV
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGR-----TPLDWDNRMRIALSAARGLA 460
L L++ + M G L + L R P +++A A G+A
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 461 HLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTP---------PTRVAGYRA 511
+L+ + K VH ++ A N ++ D + DFG+ T P R + +
Sbjct: 147 YLN-ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR---WMS 202
Query: 512 PEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEV 570
PE ++ T SDV+SFGV+L E+ T + P Q E+ V+R +
Sbjct: 203 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ----------VLRFVMEGGL 252
Query: 571 FDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGETDDGLRQSS 629
D + N + + +L+++ C P RP+ E++ I+ E + G R+ S
Sbjct: 253 LD----KPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIKE----EMEPGFREVS 300
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 127/294 (43%), Gaps = 51/294 (17%)
Query: 354 LGKGSVGTSYKA----VLEEGT--TVVVKRLKEVAVG--KREFEMQMEVLGKIKHD-NVV 404
LG+G+ G +A + + T TV VK LKE A R ++++L I H NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 405 PLRAFYYSKDEKLLVY-DYMPAGSLSALLHGSRGS-----------GRTPLDWDNRMRIA 452
L L+V ++ G+LS L R + L ++ + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 453 LSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL------NPLF---GNTTPP 503
A+G+ L S K +H ++ A NILL + + DFGL +P + G+ P
Sbjct: 146 FQVAKGMEFL-ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 204
Query: 504 TRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVV 562
+ + APE + R T +SDV+SFGVLL E+ + G +P G+ +
Sbjct: 205 LK---WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP------GVK--------I 247
Query: 563 REEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
EE+ + + MR + ++ Q + C P QRP E+V + N+
Sbjct: 248 DEEFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNL 299
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 118/285 (41%), Gaps = 44/285 (15%)
Query: 354 LGKGSVGTSYKAVL------EEGTTVVVKRLKEVAVGKR--EFEMQMEVLGKIKHDNVVP 405
LG+GS G Y+ E T V VK + E A + EF + V+ +VV
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSR-----GSGRTPLDWDNRMRIALSAARGLA 460
L L+V + M G L + L R GR P +++A A G+A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 461 HLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTP---------PTRVAGYRA 511
+L+ + K VH ++ A N ++ D + DFG+ T P R + A
Sbjct: 145 YLN-AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR---WMA 200
Query: 512 PEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVF 571
PE ++ T SD++SFGV+L E+ SL E+ Q + E+ V
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEI--------TSLAEQPY------QGLSNEQVLKFVM 246
Query: 572 D-VELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIEN 615
D L + N E + L+++ C P RP E+V ++++
Sbjct: 247 DGGYLDQPDNCPERVTDLMRM---CWQFNPKMRPTFLEIVNLLKD 288
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 104/232 (44%), Gaps = 40/232 (17%)
Query: 353 VLGKGSVGTSYKAVL--------EEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVV 404
VLGKGS G + +L E V+ KR + K ++++L ++ H N++
Sbjct: 33 VLGKGSFG---EVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIM 89
Query: 405 PLRAFYYSKDEKLLVYDYMPAGSL-SALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLH 463
L F+ K LV + G L ++ R S +D +R LS G+ ++H
Sbjct: 90 KLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFS---EVDAARIIRQVLS---GITYMH 143
Query: 464 VSGKIVHGNIKASNILLR---PDHDACVSDFGLNPLFGNTTPPTRVAG---YRAPEVVET 517
KIVH ++K N+LL D + + DFGL+ F + G Y APEV+
Sbjct: 144 -KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG 202
Query: 518 RKVTF--KSDVYSFGVLLLELLTGKAP----------NQASLGEEGIDLPRW 557
T+ K DV+S GV+L LL+G P + G+ +LP+W
Sbjct: 203 ---TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW 251
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 118/285 (41%), Gaps = 44/285 (15%)
Query: 354 LGKGSVGTSYKAVL------EEGTTVVVKRLKEVAVGKR--EFEMQMEVLGKIKHDNVVP 405
LG+GS G Y+ E T V VK + E A + EF + V+ +VV
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSR-----GSGRTPLDWDNRMRIALSAARGLA 460
L L+V + M G L + L R GR P +++A A G+A
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 461 HLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTP---------PTRVAGYRA 511
+L+ + K VH ++ A N ++ D + DFG+ T P R + A
Sbjct: 142 YLN-AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR---WMA 197
Query: 512 PEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVF 571
PE ++ T SD++SFGV+L E+ SL E+ Q + E+ V
Sbjct: 198 PESLKDGVFTTSSDMWSFGVVLWEI--------TSLAEQPY------QGLSNEQVLKFVM 243
Query: 572 D-VELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIEN 615
D L + N E + L+++ C P RP E+V ++++
Sbjct: 244 DGGYLDQPDNCPERVTDLMRM---CWQFNPKMRPTFLEIVNLLKD 285
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 82/174 (47%), Gaps = 19/174 (10%)
Query: 374 VVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLH 433
+V RLK+V E M L + H ++ + + + ++ DY+ G L +LL
Sbjct: 43 IVVRLKQVEHTNDERLM----LSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLL- 97
Query: 434 GSRGSGRTPLDWDNRMRIALSAARGLA--HLHVSGKIVHGNIKASNILLRPDHDACVSDF 491
R S R P N + +A LA +LH S I++ ++K NILL + ++DF
Sbjct: 98 --RKSQRFP----NPVAKFYAAEVCLALEYLH-SKDIIYRDLKPENILLDKNGHIKITDF 150
Query: 492 GLNPLFGNTTPPTRVAG---YRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAP 542
G + T + G Y APEVV T+ D +SFG+L+ E+L G P
Sbjct: 151 GFAKYVPDVT--YXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTP 202
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 127/294 (43%), Gaps = 51/294 (17%)
Query: 354 LGKGSVGTSYKA----VLEEGT--TVVVKRLKEVAVG--KREFEMQMEVLGKIKHD-NVV 404
LG+G+ G +A + + T TV VK LKE A R ++++L I H NVV
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 405 PLRAFYYSKDEKLLVY-DYMPAGSLSALLHGSRGS----GRTPLDW-------DNRMRIA 452
L L+V ++ G+LS L R P D ++ + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 453 LSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL------NPLF---GNTTPP 503
A+G+ L S K +H ++ A NILL + + DFGL +P + G+ P
Sbjct: 157 FQVAKGMEFL-ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 215
Query: 504 TRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVV 562
+ + APE + R T +SDV+SFGVLL E+ + G +P G+ +
Sbjct: 216 LK---WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP------GVK--------I 258
Query: 563 REEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
EE+ + + MR + ++ Q + C P QRP E+V + N+
Sbjct: 259 DEEFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNL 310
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 127/294 (43%), Gaps = 51/294 (17%)
Query: 354 LGKGSVGTSYKA----VLEEGT--TVVVKRLKEVAVG--KREFEMQMEVLGKIKHD-NVV 404
LG+G+ G +A + + T TV VK LKE A R ++++L I H NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 405 PLRAFYYSKDEKLLVY-DYMPAGSLSALLHGSRGS-----------GRTPLDWDNRMRIA 452
L L+V ++ G+LS L R + L ++ + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 453 LSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL------NPLF---GNTTPP 503
A+G+ L S K +H ++ A NILL + + DFGL +P + G+ P
Sbjct: 146 FQVAKGMEFL-ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 204
Query: 504 TRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVV 562
+ + APE + R T +SDV+SFGVLL E+ + G +P G+ +
Sbjct: 205 LK---WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP------GVK--------I 247
Query: 563 REEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
EE+ + + MR + ++ Q + C P QRP E+V + N+
Sbjct: 248 DEEFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNL 299
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 18/180 (10%)
Query: 370 GTTVVVKRLKEVAVGKRE--FEMQMEVLGKIKHDNVVPLRAFYYSKDEK--LLVYDYMPA 425
G V VK LK A + ++ ++++L + H++++ + LV +Y+P
Sbjct: 60 GEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPL 119
Query: 426 GSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHD 485
GSL L R + + A G+A+LH +H ++ A N+LL D
Sbjct: 120 GSLRDYL------PRHSIGLAQLLLFAQQICEGMAYLHAQ-HYIHRDLAARNVLLDNDRL 172
Query: 486 ACVSDFGLNPLFGNTTPPTRV-------AGYRAPEVVETRKVTFKSDVYSFGVLLLELLT 538
+ DFGL RV + APE ++ K + SDV+SFGV L ELLT
Sbjct: 173 VKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 127/294 (43%), Gaps = 51/294 (17%)
Query: 354 LGKGSVGTSYKA----VLEEGT--TVVVKRLKEVAVG--KREFEMQMEVLGKIKHD-NVV 404
LG+G+ G +A + + T TV VK LKE A R ++++L I H NVV
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 405 PLRAFYYSKDEKLLVY-DYMPAGSLSALLHGSRGS-----------GRTPLDWDNRMRIA 452
L L+V ++ G+LS L R + L ++ + +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 453 LSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL------NPLF---GNTTPP 503
A+G+ L S K +H ++ A NILL + + DFGL +P + G+ P
Sbjct: 192 FQVAKGMEFL-ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 250
Query: 504 TRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVV 562
+ + APE + R T +SDV+SFGVLL E+ + G +P G+ +
Sbjct: 251 LK---WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP------GVK--------I 293
Query: 563 REEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
EE+ + + MR + ++ Q + C P QRP E+V + N+
Sbjct: 294 DEEFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNL 345
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 127/294 (43%), Gaps = 51/294 (17%)
Query: 354 LGKGSVGTSYKA----VLEEGT--TVVVKRLKEVAVG--KREFEMQMEVLGKIKHD-NVV 404
LG+G+ G +A + + T TV VK LKE A R ++++L I H NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 405 PLRAFYYSKDEKLLVY-DYMPAGSLSALLHGSRGS-----------GRTPLDWDNRMRIA 452
L L+V ++ G+LS L R + L ++ + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 453 LSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL------NPLF---GNTTPP 503
A+G+ L S K +H ++ A NILL + + DFGL +P + G+ P
Sbjct: 155 FQVAKGMEFL-ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 213
Query: 504 TRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVV 562
+ + APE + R T +SDV+SFGVLL E+ + G +P G+ +
Sbjct: 214 LK---WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP------GVK--------I 256
Query: 563 REEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
EE+ + + MR + ++ Q + C P QRP E+V + N+
Sbjct: 257 DEEFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 26/225 (11%)
Query: 352 EVLGKGSVG-TSYKAVLEEGTTVVVKRLKEVAVG-----KREFEMQMEVLGKIKHDNVVP 405
+++G G G Y + G V +K + G +R+F + ++G+ H N++
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
L ++V +YM GSL L G T + +R + R L+ L
Sbjct: 115 LEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQF-TIMQLVGMLRGVGAGMRYLSDL--- 170
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGL------NPLFGNTTPPTRV-AGYRAPEVVETR 518
VH ++ A N+L+ + VSDFGL +P TT ++ + APE + R
Sbjct: 171 -GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFR 229
Query: 519 KVTFKSDVYSFGVLLLELLT-GKAP-------NQASLGEEGIDLP 555
+ SDV+SFGV++ E+L G+ P + S EEG LP
Sbjct: 230 TFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLP 274
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 104/228 (45%), Gaps = 31/228 (13%)
Query: 352 EVLGKGSVGTSYKAV-LEEGTTV----VVKRLKEVAVGKREFEMQME--VLGKIKHDNVV 404
+VL G+ GT YK + + EG V +K L+E K E+ E V+ + + +V
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 405 PLRAFYYSKDEKLLVYDYMPAGSLSALL--HGSRGSGRTPLDWDNRMRIALSAARGLAHL 462
L + +L++ MP G L + H + L+W + A+G+ +L
Sbjct: 88 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 140
Query: 463 HVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAGYRAP------EVVE 516
++VH ++ A N+L++ ++DFGL L G G + P E +
Sbjct: 141 E-DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 517 TRKVTFKSDVYSFGVLLLELLT-GKAPNQ-------ASLGEEGIDLPR 556
R T +SDV+S+GV + EL+T G P +S+ E+G LP+
Sbjct: 200 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 247
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 104/228 (45%), Gaps = 31/228 (13%)
Query: 352 EVLGKGSVGTSYKAV-LEEGTTV----VVKRLKEVAVGKREFEMQME--VLGKIKHDNVV 404
+VLG G+ GT YK + + EG V +K L+E K E+ E V+ + + +V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 405 PLRAFYYSKDEKLLVYDYMPAGSLSALL--HGSRGSGRTPLDWDNRMRIALSAARGLAHL 462
L + +L++ MP G L + H + L+W + A+G+ +L
Sbjct: 83 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 135
Query: 463 HVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAGYRAP------EVVE 516
++VH ++ A N+L++ ++DFG L G G + P E +
Sbjct: 136 E-DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 517 TRKVTFKSDVYSFGVLLLELLT-GKAPNQ-------ASLGEEGIDLPR 556
R T +SDV+S+GV + EL+T G P +S+ E+G LP+
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 242
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 80/184 (43%), Gaps = 25/184 (13%)
Query: 391 QMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSL-SALLHGSRGSGRTPLDWDNRM 449
++ VL + H N++ L F+ K LV + G L ++H R + +
Sbjct: 86 EVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIH------RMKFNEVDAA 139
Query: 450 RIALSAARGLAHLHVSGKIVHGNIKASNILLR-PDHDACVS--DFGLNPLFGNTTPPTRV 506
I G+ +LH IVH ++K N+LL + DA + DFGL+ +F N
Sbjct: 140 VIIKQVLSGVTYLH-KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKER 198
Query: 507 AG---YRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAP----------NQASLGEEGID 553
G Y APEV+ +K K DV+S GV+L LL G P + G+ D
Sbjct: 199 LGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFD 257
Query: 554 LPRW 557
P W
Sbjct: 258 SPEW 261
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 104/232 (44%), Gaps = 40/232 (17%)
Query: 353 VLGKGSVGTSYKAVL--------EEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVV 404
VLGKGS G + +L E V+ KR + K ++++L ++ H N++
Sbjct: 56 VLGKGSFG---EVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIM 112
Query: 405 PLRAFYYSKDEKLLVYDYMPAGSL-SALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLH 463
L F+ K LV + G L ++ R S +D +R LS G+ ++H
Sbjct: 113 KLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFS---EVDAARIIRQVLS---GITYMH 166
Query: 464 VSGKIVHGNIKASNILLR---PDHDACVSDFGLNPLFGNTTPPTRVAG---YRAPEVVET 517
KIVH ++K N+LL D + + DFGL+ F + G Y APEV+
Sbjct: 167 -KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG 225
Query: 518 RKVTF--KSDVYSFGVLLLELLTGKAP----------NQASLGEEGIDLPRW 557
T+ K DV+S GV+L LL+G P + G+ +LP+W
Sbjct: 226 ---TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW 274
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 131/314 (41%), Gaps = 50/314 (15%)
Query: 354 LGKGSVGTSYKAVL------EEGTTVVVKRLKEVAVGKR--EFEMQMEVLGKIKHDNVVP 405
LG+GS G Y+ V E T V +K + E A + EF + V+ + +VV
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGR-----TPLDWDNRMRIALSAARGLA 460
L L++ + M G L + L R + P +++A A G+A
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 461 HLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLF---------GNTTPPTRVAGYRA 511
+L+ + K VH ++ A N ++ D + DFG+ G P R + +
Sbjct: 153 YLN-ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR---WMS 208
Query: 512 PEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEV 570
PE ++ T SDV+SFGV+L E+ T + P Q E+ V+R +
Sbjct: 209 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ----------VLRFVMEGGL 258
Query: 571 FDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGETDDGLRQSSD 630
D + N + + +L+++ C P RP+ E++ I + E + G R+ S
Sbjct: 259 LD----KPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSI----KEEMEPGFREVSF 307
Query: 631 DPSKGSDGHTPPPE 644
S+ + P PE
Sbjct: 308 YYSE--ENKLPEPE 319
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 104/228 (45%), Gaps = 31/228 (13%)
Query: 352 EVLGKGSVGTSYKAV-LEEGTTV----VVKRLKEVAVGKREFEMQME--VLGKIKHDNVV 404
+VLG G+ GT YK + + EG V +K L+E K E+ E V+ + + +V
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 405 PLRAFYYSKDEKLLVYDYMPAGSLSALL--HGSRGSGRTPLDWDNRMRIALSAARGLAHL 462
L + +L++ MP G L + H + L+W + A+G+ +L
Sbjct: 85 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 137
Query: 463 HVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAGYRAP------EVVE 516
++VH ++ A N+L++ ++DFG L G G + P E +
Sbjct: 138 E-DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 196
Query: 517 TRKVTFKSDVYSFGVLLLELLT-GKAPNQ-------ASLGEEGIDLPR 556
R T +SDV+S+GV + EL+T G P +S+ E+G LP+
Sbjct: 197 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 244
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 124/299 (41%), Gaps = 48/299 (16%)
Query: 354 LGKGSVGTSYKAVL------EEGTTVVVKRLKEVAVGKR--EFEMQMEVLGKIKHDNVVP 405
LG+GS G Y+ V E T V +K + E A + EF + V+ + +VV
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGR-----TPLDWDNRMRIALSAARGLA 460
L L++ + M G L + L R P +++A A G+A
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 461 HLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLF---------GNTTPPTRVAGYRA 511
+L+ + K VH ++ A N ++ D + DFG+ G P R + +
Sbjct: 147 YLN-ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR---WMS 202
Query: 512 PEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEV 570
PE ++ T SDV+SFGV+L E+ T + P Q E+ V+R +
Sbjct: 203 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ----------VLRFVMEGGL 252
Query: 571 FDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGETDDGLRQSS 629
D + N + + +L+++ C P RP+ E++ I+ E + G R+ S
Sbjct: 253 LD----KPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIKE----EMEPGFREVS 300
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 104/232 (44%), Gaps = 40/232 (17%)
Query: 353 VLGKGSVGTSYKAVL--------EEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVV 404
VLGKGS G + +L E V+ KR + K ++++L ++ H N++
Sbjct: 57 VLGKGSFG---EVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIM 113
Query: 405 PLRAFYYSKDEKLLVYDYMPAGSL-SALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLH 463
L F+ K LV + G L ++ R S +D +R LS G+ ++H
Sbjct: 114 KLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFS---EVDAARIIRQVLS---GITYMH 167
Query: 464 VSGKIVHGNIKASNILLR---PDHDACVSDFGLNPLFGNTTPPTRVAG---YRAPEVVET 517
KIVH ++K N+LL D + + DFGL+ F + G Y APEV+
Sbjct: 168 -KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG 226
Query: 518 RKVTF--KSDVYSFGVLLLELLTGKAP----------NQASLGEEGIDLPRW 557
T+ K DV+S GV+L LL+G P + G+ +LP+W
Sbjct: 227 ---TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW 275
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 118/285 (41%), Gaps = 44/285 (15%)
Query: 354 LGKGSVGTSYKAVL------EEGTTVVVKRLKEVAVGKR--EFEMQMEVLGKIKHDNVVP 405
LG+GS G Y+ E T V VK + E A + EF + V+ +VV
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSR-----GSGRTPLDWDNRMRIALSAARGLA 460
L L+V + M G L + L R GR P +++A A G+A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 461 HLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLF---------GNTTPPTRVAGYRA 511
+L+ + K VH ++ A N ++ D + DFG+ G P R + A
Sbjct: 145 YLN-AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR---WMA 200
Query: 512 PEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVF 571
PE ++ T SD++SFGV+L E+ SL E+ Q + E+ V
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEI--------TSLAEQPY------QGLSNEQVLKFVM 246
Query: 572 D-VELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIEN 615
D L + N E + L+++ C P RP E+V ++++
Sbjct: 247 DGGYLDQPDNCPERVTDLMRM---CWQFNPKMRPTFLEIVNLLKD 288
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 124/299 (41%), Gaps = 48/299 (16%)
Query: 354 LGKGSVGTSYKAVL------EEGTTVVVKRLKEVAVGKR--EFEMQMEVLGKIKHDNVVP 405
LG+GS G Y+ V E T V +K + E A + EF + V+ + +VV
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 83
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGR-----TPLDWDNRMRIALSAARGLA 460
L L++ + M G L + L R P +++A A G+A
Sbjct: 84 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 143
Query: 461 HLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLF---------GNTTPPTRVAGYRA 511
+L+ + K VH ++ A N ++ D + DFG+ G P R + +
Sbjct: 144 YLN-ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR---WMS 199
Query: 512 PEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEV 570
PE ++ T SDV+SFGV+L E+ T + P Q E+ V+R +
Sbjct: 200 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ----------VLRFVMEGGL 249
Query: 571 FDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGETDDGLRQSS 629
D + N + + +L+++ C P RP+ E++ I+ E + G R+ S
Sbjct: 250 LD----KPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIKE----EMEPGFREVS 297
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 104/228 (45%), Gaps = 31/228 (13%)
Query: 352 EVLGKGSVGTSYKAV-LEEGTTV----VVKRLKEVAVGKREFEMQME--VLGKIKHDNVV 404
+VLG G+ GT YK + + EG V +K L+E K E+ E V+ + + +V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 405 PLRAFYYSKDEKLLVYDYMPAGSLSALL--HGSRGSGRTPLDWDNRMRIALSAARGLAHL 462
L + +L++ MP G L + H + L+W + A+G+ +L
Sbjct: 83 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 135
Query: 463 HVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAGYRAP------EVVE 516
++VH ++ A N+L++ ++DFG L G G + P E +
Sbjct: 136 E-DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 517 TRKVTFKSDVYSFGVLLLELLT-GKAPNQ-------ASLGEEGIDLPR 556
R T +SDV+S+GV + EL+T G P +S+ E+G LP+
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 242
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 26/225 (11%)
Query: 352 EVLGKGSVG-TSYKAVLEEGTTVVVKRLKEVAVG-----KREFEMQMEVLGKIKHDNVVP 405
+++G G G Y + G V +K + G +R+F + ++G+ H N++
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
L ++V +YM GSL L G T + +R + R L+ L
Sbjct: 115 LEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQF-TIMQLVGMLRGVGAGMRYLSDL--- 170
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGL------NPLFGNTTPPTRV-AGYRAPEVVETR 518
VH ++ A N+L+ + VSDFGL +P TT ++ + APE + R
Sbjct: 171 -GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFR 229
Query: 519 KVTFKSDVYSFGVLLLELLT-GKAP-------NQASLGEEGIDLP 555
+ SDV+SFGV++ E+L G+ P + S EEG LP
Sbjct: 230 TFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLP 274
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 87/197 (44%), Gaps = 14/197 (7%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVVPLRA 408
+G GS G Y A + V +K++ K+ ++ ++ L K++H N + R
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 409 FYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKI 468
Y + LV +Y GS S LL + PL + A +GLA+LH S +
Sbjct: 122 CYLREHTAWLVMEYC-LGSASDLLE----VHKKPLQEVEIAAVTHGALQGLAYLH-SHNM 175
Query: 469 VHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAGYRAPEVV---ETRKVTFKSD 525
+H ++KA NILL + DFG + + APEV+ + + K D
Sbjct: 176 IHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVD 235
Query: 526 VYSFGVLLLELLTGKAP 542
V+S G+ +EL K P
Sbjct: 236 VWSLGITCIELAERKPP 252
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 125/299 (41%), Gaps = 48/299 (16%)
Query: 354 LGKGSVGTSYKAVL------EEGTTVVVKRLKEVAVGKR--EFEMQMEVLGKIKHDNVVP 405
LG+GS G Y+ V E T V +K + E A + EF + V+ + +VV
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 82
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGR-----TPLDWDNRMRIALSAARGLA 460
L L++ + M G L + L R + P +++A A G+A
Sbjct: 83 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 142
Query: 461 HLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLF---------GNTTPPTRVAGYRA 511
+L+ + K VH ++ A N ++ D + DFG+ G P R + +
Sbjct: 143 YLN-ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR---WMS 198
Query: 512 PEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEV 570
PE ++ T SDV+SFGV+L E+ T + P Q E+ V+R +
Sbjct: 199 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ----------VLRFVMEGGL 248
Query: 571 FDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGETDDGLRQSS 629
D + N + + +L+++ C P RP+ E++ I+ E + G R+ S
Sbjct: 249 LD----KPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIKE----EMEPGFREVS 296
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 112/250 (44%), Gaps = 43/250 (17%)
Query: 323 AAEADRNKL-VFFE-----GGVYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVK 376
A RNK+ VFF+ VY L D S + LG G+ G K E T K
Sbjct: 121 ALSLSRNKVFVFFDLTVDDQSVYPKALRDEYIMS-KTLGSGACG-EVKLAFERKTC---K 175
Query: 377 RLKEVAVGKREF--------------EMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDY 422
++ + KR+F E ++E+L K+ H ++ ++ F+ ++D +V +
Sbjct: 176 KVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-YYIVLEL 234
Query: 423 MPAGSL-SALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLR 481
M G L ++ R T + +M +A+ +LH +G I+H ++K N+LL
Sbjct: 235 MEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ------YLHENG-IIHRDLKPENVLLS 287
Query: 482 PDHDAC---VSDFGLNPLFGNTTPPTRVAG---YRAPEV---VETRKVTFKSDVYSFGVL 532
+ C ++DFG + + G T+ + G Y APEV V T D +S GV+
Sbjct: 288 SQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI 347
Query: 533 LLELLTGKAP 542
L L+G P
Sbjct: 348 LFICLSGYPP 357
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 130/314 (41%), Gaps = 50/314 (15%)
Query: 354 LGKGSVGTSYKAVL------EEGTTVVVKRLKEVAVGKR--EFEMQMEVLGKIKHDNVVP 405
LG+GS G Y+ V E T V +K + E A + EF + V+ + +VV
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGR-----TPLDWDNRMRIALSAARGLA 460
L L++ + M G L + L R P +++A A G+A
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 461 HLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLF---------GNTTPPTRVAGYRA 511
+L+ + K VH ++ A N ++ D + DFG+ G P R + +
Sbjct: 153 YLN-ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR---WMS 208
Query: 512 PEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEV 570
PE ++ T SDV+SFGV+L E+ T + P Q E+ V+R +
Sbjct: 209 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ----------VLRFVMEGGL 258
Query: 571 FDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGETDDGLRQSSD 630
D + N + + +L+++ C P RP+ E++ I + E + G R+ S
Sbjct: 259 LD----KPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSI----KEEMEPGFREVSF 307
Query: 631 DPSKGSDGHTPPPE 644
S+ + P PE
Sbjct: 308 YYSE--ENKLPEPE 319
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 104/232 (44%), Gaps = 40/232 (17%)
Query: 353 VLGKGSVGTSYKAVL--------EEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVV 404
VLGKGS G + +L E V+ KR + K ++++L ++ H N++
Sbjct: 39 VLGKGSFG---EVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIM 95
Query: 405 PLRAFYYSKDEKLLVYDYMPAGSL-SALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLH 463
L F+ K LV + G L ++ R S +D +R LS G+ ++H
Sbjct: 96 KLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFS---EVDAARIIRQVLS---GITYMH 149
Query: 464 VSGKIVHGNIKASNILLR---PDHDACVSDFGLNPLFGNTTPPTRVAG---YRAPEVVET 517
KIVH ++K N+LL D + + DFGL+ F + G Y APEV+
Sbjct: 150 -KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG 208
Query: 518 RKVTF--KSDVYSFGVLLLELLTGKAP----------NQASLGEEGIDLPRW 557
T+ K DV+S GV+L LL+G P + G+ +LP+W
Sbjct: 209 ---TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW 257
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 103/228 (45%), Gaps = 31/228 (13%)
Query: 352 EVLGKGSVGTSYKAV-LEEGTTV----VVKRLKEVAVGKREFEMQME--VLGKIKHDNVV 404
+VL G+ GT YK + + EG V +K L+E K E+ E V+ + + +V
Sbjct: 21 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 405 PLRAFYYSKDEKLLVYDYMPAGSLSALL--HGSRGSGRTPLDWDNRMRIALSAARGLAHL 462
L + +L+ MP G L + H + L+W + A+G+ +L
Sbjct: 81 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 133
Query: 463 HVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAGYRAP------EVVE 516
++VH ++ A N+L++ ++DFGL L G G + P E +
Sbjct: 134 E-DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 517 TRKVTFKSDVYSFGVLLLELLT-GKAPNQ-------ASLGEEGIDLPR 556
R T +SDV+S+GV + EL+T G P +S+ E+G LP+
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 240
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 118/285 (41%), Gaps = 44/285 (15%)
Query: 354 LGKGSVGTSYKAVL------EEGTTVVVKRLKEVAVGKR--EFEMQMEVLGKIKHDNVVP 405
LG+GS G Y+ E T V VK + E A + EF + V+ +VV
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSR-----GSGRTPLDWDNRMRIALSAARGLA 460
L L+V + M G L + L R GR P +++A A G+A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 461 HLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLF---------GNTTPPTRVAGYRA 511
+L+ + K VH ++ A N ++ D + DFG+ G P R + A
Sbjct: 145 YLN-AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVR---WMA 200
Query: 512 PEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVF 571
PE ++ T SD++SFGV+L E+ SL E+ Q + E+ V
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEI--------TSLAEQPY------QGLSNEQVLKFVM 246
Query: 572 D-VELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIEN 615
D L + N E + L+++ C P RP E+V ++++
Sbjct: 247 DGGYLDQPDNCPERVTDLMRM---CWQFNPKMRPTFLEIVNLLKD 288
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 118/285 (41%), Gaps = 44/285 (15%)
Query: 354 LGKGSVGTSYKAVL------EEGTTVVVKRLKEVAVGKR--EFEMQMEVLGKIKHDNVVP 405
LG+GS G Y+ E T V VK + E A + EF + V+ +VV
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSR-----GSGRTPLDWDNRMRIALSAARGLA 460
L L+V + M G L + L R GR P +++A A G+A
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 461 HLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLF---------GNTTPPTRVAGYRA 511
+L+ + K VH ++ A N ++ D + DFG+ G P R + A
Sbjct: 144 YLN-AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR---WMA 199
Query: 512 PEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVF 571
PE ++ T SD++SFGV+L E+ SL E+ Q + E+ V
Sbjct: 200 PESLKDGVFTTSSDMWSFGVVLWEI--------TSLAEQPY------QGLSNEQVLKFVM 245
Query: 572 D-VELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIEN 615
D L + N E + L+++ C P RP E+V ++++
Sbjct: 246 DGGYLDQPDNCPERVTDLMRM---CWQFNPKMRPTFLEIVNLLKD 287
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 124/299 (41%), Gaps = 48/299 (16%)
Query: 354 LGKGSVGTSYKAVL------EEGTTVVVKRLKEVAVGKR--EFEMQMEVLGKIKHDNVVP 405
LG+GS G Y+ V E T V +K + E A + EF + V+ + +VV
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGR-----TPLDWDNRMRIALSAARGLA 460
L L++ + M G L + L R P +++A A G+A
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 461 HLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLF---------GNTTPPTRVAGYRA 511
+L+ + K VH ++ A N ++ D + DFG+ G P R + +
Sbjct: 146 YLN-ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR---WMS 201
Query: 512 PEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEV 570
PE ++ T SDV+SFGV+L E+ T + P Q E+ V+R +
Sbjct: 202 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ----------VLRFVMEGGL 251
Query: 571 FDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGETDDGLRQSS 629
D + N + + +L+++ C P RP+ E++ I + E + G R+ S
Sbjct: 252 LD----KPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSI----KEEMEPGFREVS 299
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 124/299 (41%), Gaps = 48/299 (16%)
Query: 354 LGKGSVGTSYKAVL------EEGTTVVVKRLKEVAVGKR--EFEMQMEVLGKIKHDNVVP 405
LG+GS G Y+ V E T V +K + E A + EF + V+ + +VV
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGR-----TPLDWDNRMRIALSAARGLA 460
L L++ + M G L + L R P +++A A G+A
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 461 HLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLF---------GNTTPPTRVAGYRA 511
+L+ + K VH ++ A N ++ D + DFG+ G P R + +
Sbjct: 140 YLN-ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR---WMS 195
Query: 512 PEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEV 570
PE ++ T SDV+SFGV+L E+ T + P Q E+ V+R +
Sbjct: 196 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ----------VLRFVMEGGL 245
Query: 571 FDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGETDDGLRQSS 629
D + N + + +L+++ C P RP+ E++ I+ E + G R+ S
Sbjct: 246 LD----KPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIKE----EMEPGFREVS 293
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 103/228 (45%), Gaps = 31/228 (13%)
Query: 352 EVLGKGSVGTSYKAV-LEEGTTV----VVKRLKEVAVGKREFEMQME--VLGKIKHDNVV 404
+VL G+ GT YK + + EG V +K L+E K E+ E V+ + + +V
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 405 PLRAFYYSKDEKLLVYDYMPAGSLSALL--HGSRGSGRTPLDWDNRMRIALSAARGLAHL 462
L + +L+ MP G L + H + L+W + A+G+ +L
Sbjct: 88 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 140
Query: 463 HVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAGYRAP------EVVE 516
++VH ++ A N+L++ ++DFGL L G G + P E +
Sbjct: 141 E-DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 517 TRKVTFKSDVYSFGVLLLELLT-GKAPNQ-------ASLGEEGIDLPR 556
R T +SDV+S+GV + EL+T G P +S+ E+G LP+
Sbjct: 200 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 247
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 124/299 (41%), Gaps = 48/299 (16%)
Query: 354 LGKGSVGTSYKAVL------EEGTTVVVKRLKEVAVGKR--EFEMQMEVLGKIKHDNVVP 405
LG+GS G Y+ V E T V +K + E A + EF + V+ + +VV
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGR-----TPLDWDNRMRIALSAARGLA 460
L L++ + M G L + L R P +++A A G+A
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 461 HLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLF---------GNTTPPTRVAGYRA 511
+L+ + K VH ++ A N ++ D + DFG+ G P R + +
Sbjct: 146 YLN-ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR---WMS 201
Query: 512 PEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEV 570
PE ++ T SDV+SFGV+L E+ T + P Q E+ V+R +
Sbjct: 202 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ----------VLRFVMEGGL 251
Query: 571 FDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGETDDGLRQSS 629
D + N + + +L+++ C P RP+ E++ I+ E + G R+ S
Sbjct: 252 LD----KPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIKE----EMEPGFREVS 299
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 111/245 (45%), Gaps = 43/245 (17%)
Query: 328 RNKL-VFFE-----GGVYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEV 381
RNK+ VFF+ VY L D S + LG G+ G K E T K++
Sbjct: 112 RNKVFVFFDLTVDDQSVYPKALRDEYIMS-KTLGSGACG-EVKLAFERKT---CKKVAIR 166
Query: 382 AVGKREF--------------EMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGS 427
+ KR+F E ++E+L K+ H ++ ++ F+ ++D +V + M G
Sbjct: 167 IISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGE 225
Query: 428 L-SALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDA 486
L ++ R T + +M +A+ +LH +G I+H ++K N+LL +
Sbjct: 226 LFDKVVGNKRLKEATCKLYFYQMLLAVQ------YLHENG-IIHRDLKPENVLLSSQEED 278
Query: 487 C---VSDFGLNPLFGNTTPPTRVAG---YRAPEV---VETRKVTFKSDVYSFGVLLLELL 537
C ++DFG + + G T+ + G Y APEV V T D +S GV+L L
Sbjct: 279 CLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICL 338
Query: 538 TGKAP 542
+G P
Sbjct: 339 SGYPP 343
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 103/228 (45%), Gaps = 31/228 (13%)
Query: 352 EVLGKGSVGTSYKAV-LEEGTTV----VVKRLKEVAVGKREFEMQME--VLGKIKHDNVV 404
+VLG G+ GT YK + + EG V +K L+E K E+ E V+ + + +V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 405 PLRAFYYSKDEKLLVYDYMPAGSLSALL--HGSRGSGRTPLDWDNRMRIALSAARGLAHL 462
L + +L+ MP G L + H + L+W + A+G+ +L
Sbjct: 83 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 135
Query: 463 HVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAGYRAP------EVVE 516
++VH ++ A N+L++ ++DFG L G G + P E +
Sbjct: 136 E-DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 517 TRKVTFKSDVYSFGVLLLELLT-GKAPNQ-------ASLGEEGIDLPR 556
R T +SDV+S+GV + EL+T G P +S+ E+G LP+
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 242
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 103/228 (45%), Gaps = 31/228 (13%)
Query: 352 EVLGKGSVGTSYKAV-LEEGTTV----VVKRLKEVAVGKREFEMQME--VLGKIKHDNVV 404
+VLG G+ GT YK + + EG V +K L+E K E+ E V+ + + +V
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 405 PLRAFYYSKDEKLLVYDYMPAGSLSALL--HGSRGSGRTPLDWDNRMRIALSAARGLAHL 462
L + +L+ MP G L + H + L+W + A+G+ +L
Sbjct: 88 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 140
Query: 463 HVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAGYRAP------EVVE 516
++VH ++ A N+L++ ++DFG L G G + P E +
Sbjct: 141 E-DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 517 TRKVTFKSDVYSFGVLLLELLT-GKAPNQ-------ASLGEEGIDLPR 556
R T +SDV+S+GV + EL+T G P +S+ E+G LP+
Sbjct: 200 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 247
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 103/228 (45%), Gaps = 31/228 (13%)
Query: 352 EVLGKGSVGTSYKAV-LEEGTTV----VVKRLKEVAVGKREFEMQME--VLGKIKHDNVV 404
+VLG G+ GT YK + + EG V +K L+E K E+ E V+ + + +V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 405 PLRAFYYSKDEKLLVYDYMPAGSLSALL--HGSRGSGRTPLDWDNRMRIALSAARGLAHL 462
L + +L+ MP G L + H + L+W + A+G+ +L
Sbjct: 81 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 133
Query: 463 HVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAGYRAP------EVVE 516
++VH ++ A N+L++ ++DFG L G G + P E +
Sbjct: 134 E-DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 517 TRKVTFKSDVYSFGVLLLELLT-GKAPNQ-------ASLGEEGIDLPR 556
R T +SDV+S+GV + EL+T G P +S+ E+G LP+
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 240
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 10/123 (8%)
Query: 107 GEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLDLSSNNFSGKIPFDVNNLTH 166
G+IP SN + L SL+L N SG P+S+ +++L L L N G+IP ++ +
Sbjct: 405 GKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKT 464
Query: 167 LTGLFLENNKFSGNLPS--INPANLRDFNVSNNNLNGSIPATLS--------KFPQSSFT 216
L L L+ N +G +PS N NL ++SNN L G IP + K +SF+
Sbjct: 465 LETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFS 524
Query: 217 GNL 219
GN+
Sbjct: 525 GNI 527
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
Query: 107 GEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLDLSSNNFSGKIPFDVNNLTH 166
G IPS +L+ LR L L N G P + + L L L N+ +G+IP ++N T+
Sbjct: 429 GTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTN 488
Query: 167 LTGLFLENNKFSGNLPSI--NPANLRDFNVSNNNLNGSIPATL 207
L + L NN+ +G +P NL +SNN+ +G+IPA L
Sbjct: 489 LNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAEL 531
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 10/109 (9%)
Query: 107 GEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLDLSSNNFSGKIPFDVNNLTH 166
GEIP + + L +L L N +G P+ ++ L + LS+N +G+IP + L +
Sbjct: 453 GEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLEN 512
Query: 167 LTGLFLENNKFSGNLPSINPANLRD------FNVSNNNLNGSIPATLSK 209
L L L NN FSGN+ PA L D +++ N NG+IPA + K
Sbjct: 513 LAILKLSNNSFSGNI----PAELGDCRSLIWLDLNTNLFNGTIPAAMFK 557
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 57/106 (53%), Gaps = 5/106 (4%)
Query: 107 GEIPSDFSNLTL-LRSLYLQSNQFSGVFPASVTR--MNRLTRLDLSSNNFSGKIPFDVNN 163
GE+P +NL+ L +L L SN FSG ++ + N L L L +N F+GKIP ++N
Sbjct: 354 GELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSN 413
Query: 164 LTHLTGLFLENNKFSGNLPSI--NPANLRDFNVSNNNLNGSIPATL 207
+ L L L N SG +PS + + LRD + N L G IP L
Sbjct: 414 CSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQEL 459
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 54/116 (46%), Gaps = 4/116 (3%)
Query: 107 GEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLDLSSNNFSGKIPFDVNNLTH 166
G F N + L + N SG P + M L L+L N+ SG IP +V +L
Sbjct: 619 GHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRG 678
Query: 167 LTGLFLENNKFSGNLPSINPA--NLRDFNVSNNNLNGSIP--ATLSKFPQSSFTGN 218
L L L +NK G +P A L + ++SNNNL+G IP FP + F N
Sbjct: 679 LNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNN 734
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 6/107 (5%)
Query: 119 LRSLYLQSNQFSGVFPASVT-RMNRLTRLDLSSNNFSGKIPFDVNNLTHLTGLFLENNKF 177
L+ L L N+F+G P ++ + LT LDLS N+F G +P + + L L L +N F
Sbjct: 268 LQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNF 327
Query: 178 SGNLPS---INPANLRDFNVSNNNLNGSIPATLSKFPQSSFTGNLDL 221
SG LP + L+ ++S N +G +P +L+ S T LDL
Sbjct: 328 SGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLT--LDL 372
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 112 DFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLDLSSNNFSGKIPFDVNNLTHLTGLF 171
D S L L + SN FS P + + L LD+S N SG ++ T L L
Sbjct: 192 DVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLN 250
Query: 172 LENNKFSGNLPSINPANLRDFNVSNNNLNGSIPATLS 208
+ +N+F G +P + +L+ +++ N G IP LS
Sbjct: 251 ISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLS 287
Score = 32.3 bits (72), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 14/95 (14%)
Query: 119 LRSLYLQSNQFSGVFPASVT---RMNRLTRLDLSSNNFSGK------IPFDVNNLTHLTG 169
L+ L + SN FP V+ ++N L LDLS+N+ SG + L HL
Sbjct: 125 LKFLNVSSNTLD--FPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLA- 181
Query: 170 LFLENNKFSGNLPSINPANLRDFNVSNNNLNGSIP 204
+ NK SG++ NL +VS+NN + IP
Sbjct: 182 --ISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIP 214
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 87/197 (44%), Gaps = 14/197 (7%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVVPLRA 408
+G GS G Y A + V +K++ K+ ++ ++ L K++H N + R
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 409 FYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKI 468
Y + LV +Y GS S LL + PL + A +GLA+LH S +
Sbjct: 83 CYLREHTAWLVMEYC-LGSASDLLE----VHKKPLQEVEIAAVTHGALQGLAYLH-SHNM 136
Query: 469 VHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAGYRAPEVV---ETRKVTFKSD 525
+H ++KA NILL + DFG + + APEV+ + + K D
Sbjct: 137 IHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVD 196
Query: 526 VYSFGVLLLELLTGKAP 542
V+S G+ +EL K P
Sbjct: 197 VWSLGITCIELAERKPP 213
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 121/291 (41%), Gaps = 45/291 (15%)
Query: 354 LGKGSVGTSYKA----VLEEGT--TVVVKRLKEVAVG--KREFEMQMEVLGKIKHD-NVV 404
LG+G+ G +A + + T TV VK LKE A R ++++L I H NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 405 PLRAFYYSKDEKLLVY-DYMPAGSLSALLHGSRGS-----------GRTPLDWDNRMRIA 452
L L+V ++ G+LS L R + L ++ + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 453 LSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAGYR-- 510
A+G+ L S K +H ++ A NILL + + DFGL R R
Sbjct: 146 FQVAKGMEFL-ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 204
Query: 511 ----APEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREE 565
APE + R T +SDV+SFGVLL E+ + G +P G+ + EE
Sbjct: 205 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP------GVK--------IDEE 250
Query: 566 WTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
+ + + MR + ++ Q + C P QRP E+V + N+
Sbjct: 251 FCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNL 299
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 121/291 (41%), Gaps = 45/291 (15%)
Query: 354 LGKGSVGTSYKA----VLEEGT--TVVVKRLKEVAVG--KREFEMQMEVLGKIKHD-NVV 404
LG+G+ G +A + + T TV VK LKE A R ++++L I H NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 405 PLRAFYYSKDEKLLVY-DYMPAGSLSALLHGSRGS-----------GRTPLDWDNRMRIA 452
L L+V ++ G+LS L R + L ++ + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 453 LSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAGYR-- 510
A+G+ L S K +H ++ A NILL + + DFGL R R
Sbjct: 155 FQVAKGMEFL-ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 511 ----APEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREE 565
APE + R T +SDV+SFGVLL E+ + G +P G+ + EE
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP------GVK--------IDEE 259
Query: 566 WTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
+ + + MR + ++ Q + C P QRP E+V + N+
Sbjct: 260 FCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 103/228 (45%), Gaps = 31/228 (13%)
Query: 352 EVLGKGSVGTSYKAV-LEEG----TTVVVKRLKEVAVGKREFEMQME--VLGKIKHDNVV 404
+VLG G+ GT YK + + EG V + L+E K E+ E V+ + + +V
Sbjct: 55 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVC 114
Query: 405 PLRAFYYSKDEKLLVYDYMPAGSLSALL--HGSRGSGRTPLDWDNRMRIALSAARGLAHL 462
L + +L+ MP G L + H + L+W + A+G+ +L
Sbjct: 115 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 167
Query: 463 HVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAGYRAP------EVVE 516
++VH ++ A N+L++ ++DFGL L G G + P E +
Sbjct: 168 E-DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 226
Query: 517 TRKVTFKSDVYSFGVLLLELLT-GKAPNQ-------ASLGEEGIDLPR 556
R T +SDV+S+GV + EL+T G P +S+ E+G LP+
Sbjct: 227 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 274
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 121/291 (41%), Gaps = 45/291 (15%)
Query: 354 LGKGSVGTSYKA----VLEEGT--TVVVKRLKEVAVG--KREFEMQMEVLGKIKHD-NVV 404
LG+G+ G +A + + T TV VK LKE A R ++++L I H NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 405 PLRAFYYSKDEKLLVY-DYMPAGSLSALLHGSRGS-----------GRTPLDWDNRMRIA 452
L L+V ++ G+LS L R + L ++ + +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 453 LSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAGYR-- 510
A+G+ L S K +H ++ A NILL + + DFGL R R
Sbjct: 146 FQVAKGMEFL-ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 204
Query: 511 ----APEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREE 565
APE + R T +SDV+SFGVLL E+ + G +P G+ + EE
Sbjct: 205 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP------GVK--------IDEE 250
Query: 566 WTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
+ + + MR + ++ Q + C P QRP E+V + N+
Sbjct: 251 FCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNL 299
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 10/123 (8%)
Query: 107 GEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLDLSSNNFSGKIPFDVNNLTH 166
G+IP SN + L SL+L N SG P+S+ +++L L L N G+IP ++ +
Sbjct: 408 GKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKT 467
Query: 167 LTGLFLENNKFSGNLPS--INPANLRDFNVSNNNLNGSIPA--------TLSKFPQSSFT 216
L L L+ N +G +PS N NL ++SNN L G IP + K +SF+
Sbjct: 468 LETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFS 527
Query: 217 GNL 219
GN+
Sbjct: 528 GNI 530
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 10/109 (9%)
Query: 107 GEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLDLSSNNFSGKIPFDVNNLTH 166
GEIP + + L +L L N +G P+ ++ L + LS+N +G+IP + L +
Sbjct: 456 GEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLEN 515
Query: 167 LTGLFLENNKFSGNLPSINPANLRD------FNVSNNNLNGSIPATLSK 209
L L L NN FSGN+ PA L D +++ N NG+IPA + K
Sbjct: 516 LAILKLSNNSFSGNI----PAELGDCRSLIWLDLNTNLFNGTIPAAMFK 560
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
Query: 107 GEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLDLSSNNFSGKIPFDVNNLTH 166
G IPS +L+ LR L L N G P + + L L L N+ +G+IP ++N T+
Sbjct: 432 GTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTN 491
Query: 167 LTGLFLENNKFSGNLPSI--NPANLRDFNVSNNNLNGSIPATL 207
L + L NN+ +G +P NL +SNN+ +G+IPA L
Sbjct: 492 LNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAEL 534
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 57/106 (53%), Gaps = 5/106 (4%)
Query: 107 GEIPSDFSNLTL-LRSLYLQSNQFSGVFPASVTR--MNRLTRLDLSSNNFSGKIPFDVNN 163
GE+P +NL+ L +L L SN FSG ++ + N L L L +N F+GKIP ++N
Sbjct: 357 GELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSN 416
Query: 164 LTHLTGLFLENNKFSGNLPSI--NPANLRDFNVSNNNLNGSIPATL 207
+ L L L N SG +PS + + LRD + N L G IP L
Sbjct: 417 CSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQEL 462
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 54/116 (46%), Gaps = 4/116 (3%)
Query: 107 GEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLDLSSNNFSGKIPFDVNNLTH 166
G F N + L + N SG P + M L L+L N+ SG IP +V +L
Sbjct: 622 GHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRG 681
Query: 167 LTGLFLENNKFSGNLPSINPA--NLRDFNVSNNNLNGSIP--ATLSKFPQSSFTGN 218
L L L +NK G +P A L + ++SNNNL+G IP FP + F N
Sbjct: 682 LNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNN 737
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 6/107 (5%)
Query: 119 LRSLYLQSNQFSGVFPASVT-RMNRLTRLDLSSNNFSGKIPFDVNNLTHLTGLFLENNKF 177
L+ L L N+F+G P ++ + LT LDLS N+F G +P + + L L L +N F
Sbjct: 271 LQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNF 330
Query: 178 SGNLPS---INPANLRDFNVSNNNLNGSIPATLSKFPQSSFTGNLDL 221
SG LP + L+ ++S N +G +P +L+ S T LDL
Sbjct: 331 SGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLT--LDL 375
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 112 DFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLDLSSNNFSGKIPFDVNNLTHLTGLF 171
D S L L + SN FS P + + L LD+S N SG ++ T L L
Sbjct: 195 DVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLN 253
Query: 172 LENNKFSGNLPSINPANLRDFNVSNNNLNGSIPATLS 208
+ +N+F G +P + +L+ +++ N G IP LS
Sbjct: 254 ISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLS 290
Score = 32.3 bits (72), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 14/95 (14%)
Query: 119 LRSLYLQSNQFSGVFPASVT---RMNRLTRLDLSSNNFSGK------IPFDVNNLTHLTG 169
L+ L + SN FP V+ ++N L LDLS+N+ SG + L HL
Sbjct: 128 LKFLNVSSNTLD--FPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLA- 184
Query: 170 LFLENNKFSGNLPSINPANLRDFNVSNNNLNGSIP 204
+ NK SG++ NL +VS+NN + IP
Sbjct: 185 --ISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIP 217
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 121/291 (41%), Gaps = 45/291 (15%)
Query: 354 LGKGSVGTSYKA----VLEEGT--TVVVKRLKEVAVG--KREFEMQMEVLGKIKHD-NVV 404
LG+G+ G +A + + T TV VK LKE A R ++++L I H NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 405 PLRAFYYSKDEKLLVY-DYMPAGSLSALLHGSRGS-----------GRTPLDWDNRMRIA 452
L L+V ++ G+LS L R + L ++ + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 453 LSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAGYR-- 510
A+G+ L S K +H ++ A NILL + + DFGL R R
Sbjct: 155 FQVAKGMEFL-ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLP 213
Query: 511 ----APEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREE 565
APE + R T +SDV+SFGVLL E+ + G +P G+ + EE
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP------GVK--------IDEE 259
Query: 566 WTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
+ + + MR + ++ Q + C P QRP E+V + N+
Sbjct: 260 FCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 124/299 (41%), Gaps = 48/299 (16%)
Query: 354 LGKGSVGTSYKAVL------EEGTTVVVKRLKEVAVGKR--EFEMQMEVLGKIKHDNVVP 405
LG+GS G Y+ V E T V +K + E A + EF + V+ + +VV
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGR-----TPLDWDNRMRIALSAARGLA 460
L L++ + M G L + L R P +++A A G+A
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 461 HLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLF---------GNTTPPTRVAGYRA 511
+L+ + K VH ++ A N + D + DFG+ G P R + +
Sbjct: 140 YLN-ANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR---WMS 195
Query: 512 PEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEV 570
PE ++ T SDV+SFGV+L E+ T + P Q E+ V+R +
Sbjct: 196 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ----------VLRFVMEGGL 245
Query: 571 FDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGETDDGLRQSS 629
D + N + +++L+++ C P RP+ E++ I+ E + G R+ S
Sbjct: 246 LD----KPDNCPDMLLELMRM---CWQYNPKMRPSFLEIISSIKE----EMEPGFREVS 293
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 102/232 (43%), Gaps = 40/232 (17%)
Query: 353 VLGKGSVGTSYKAVL--------EEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVV 404
VLGKGS G + +L E V+ KR + K ++++L ++ H N+
Sbjct: 33 VLGKGSFG---EVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIX 89
Query: 405 PLRAFYYSKDEKLLVYDYMPAGSL-SALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLH 463
L F+ K LV + G L ++ R S +D +R LS G+ + H
Sbjct: 90 KLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFS---EVDAARIIRQVLS---GITYXH 143
Query: 464 VSGKIVHGNIKASNILLR---PDHDACVSDFGLNPLFGNTTPPTRVAG---YRAPEVVET 517
KIVH ++K N+LL D + + DFGL+ F + G Y APEV+
Sbjct: 144 -KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHG 202
Query: 518 RKVTF--KSDVYSFGVLLLELLTGKAP----------NQASLGEEGIDLPRW 557
T+ K DV+S GV+L LL+G P + G+ +LP+W
Sbjct: 203 ---TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW 251
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 91/202 (45%), Gaps = 18/202 (8%)
Query: 352 EVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAVGKREFEMQME-----VLGKIKHDNVVP 405
+V+GKGS G A + E VK L++ A+ K++ E + +L +KH +V
Sbjct: 44 KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 103
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRI-ALSAARGLAHLHV 464
L + + D+ V DY+ G L L R + R R A A L +LH
Sbjct: 104 LHFSFQTADKLYFVLDYINGGELFYHLQRERCF------LEPRARFYAAEIASALGYLH- 156
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGL--NPLFGNTTPPTRVAG--YRAPEVVETRKV 520
S IV+ ++K NILL ++DFGL + N+T T Y APEV+ +
Sbjct: 157 SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPY 216
Query: 521 TFKSDVYSFGVLLLELLTGKAP 542
D + G +L E+L G P
Sbjct: 217 DRTVDWWCLGAVLYEMLYGLPP 238
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 121/286 (42%), Gaps = 42/286 (14%)
Query: 332 VFFEGGVYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGK------ 385
VF E +FD ++LRA +GKGS G ++++ T + +K + K
Sbjct: 5 VFDENEDVNFDHFEILRA----IGKGSFGKV--CIVQKNDTKKMYAMKYMNKQKCVERNE 58
Query: 386 -REFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLD 444
R +++++ ++H +V L + +++ +V D + G L L + +
Sbjct: 59 VRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVK 118
Query: 445 WDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPT 504
L +L + +I+H ++K NILL ++DF + + T T
Sbjct: 119 L-----FICELVMALDYLQ-NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQIT 172
Query: 505 RVAG---YRAPEVVETRK---VTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWV 558
+AG Y APE+ +RK +F D +S GV ELL G+ P +
Sbjct: 173 TMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYH-------------I 219
Query: 559 QSVVREEWTAEVFDVELMRYHNI-EEEMVQLLQIAMGCVSTVPDQR 603
+S + F+ ++ Y + +EMV LL+ + PDQR
Sbjct: 220 RSSTSSKEIVHTFETTVVTYPSAWSQEMVSLLK---KLLEPNPDQR 262
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 81/172 (47%), Gaps = 23/172 (13%)
Query: 383 VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTP 442
V + + E ++ +L +I+H NV+ L Y +K + +L+ + + G L L + +
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKES 110
Query: 443 LDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLR----PDHDACVSDFGLNPL-- 496
L + G+ +LH S +I H ++K NI+L P + DFGL
Sbjct: 111 LTEEEATEFLKQILNGVYYLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 497 FGNT------TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAP 542
FGN TP + APE+V + ++D++S GV+ LL+G +P
Sbjct: 170 FGNEFKNIFGTP-----AFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 100/220 (45%), Gaps = 41/220 (18%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVVPLRA 408
LGKG+ G +K++ G V VK++ + +R F M + H+N+V L
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 409 FYYSKDEK--LLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSG 466
+ +++ LV+DYM L A++ R + P+ ++ + + + +LH SG
Sbjct: 77 VLRADNDRDVYLVFDYMET-DLHAVI---RANILEPV---HKQYVVYQLIKVIKYLH-SG 128
Query: 467 KIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT-------------------------T 501
++H ++K SNILL + V+DFGL+ F N T
Sbjct: 129 GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILT 188
Query: 502 PPTRVAGYRAPEV-VETRKVTFKSDVYSFGVLLLELLTGK 540
YRAPE+ + + K T D++S G +L E+L GK
Sbjct: 189 DYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 100/220 (45%), Gaps = 24/220 (10%)
Query: 351 AEVLGKGSVGTSYKAV-LEEG----TTVVVKRLKEVAVGKREFEMQME--VLGKIKHDNV 403
+VLG G+ GT YK + + +G V +K L+E K E+ E V+ + V
Sbjct: 22 VKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYV 81
Query: 404 VPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRG--SGRTPLDWDNRMRIALSAARGLAH 461
L + +L V MP G L + +RG + L+W + A+G+++
Sbjct: 82 SRLLGICLTSTVQL-VTQLMPYGCLLDHVRENRGRLGSQDLLNW------CMQIAKGMSY 134
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAGYRAP------EVV 515
L ++VH ++ A N+L++ + ++DFGL L G + P E +
Sbjct: 135 LE-DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESI 193
Query: 516 ETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDL 554
R+ T +SDV+S+GV + EL+T G P E DL
Sbjct: 194 LRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDL 233
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 81/172 (47%), Gaps = 23/172 (13%)
Query: 383 VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTP 442
V + + E ++ +L +I+H NV+ L Y +K + +L+ + + G L L + +
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKES 110
Query: 443 LDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLR----PDHDACVSDFGLNPL-- 496
L + G+ +LH S +I H ++K NI+L P + DFGL
Sbjct: 111 LTEEEATEFLKQILNGVYYLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 497 FGNT------TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAP 542
FGN TP + APE+V + ++D++S GV+ LL+G +P
Sbjct: 170 FGNEFKNIFGTPE-----FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 99/216 (45%), Gaps = 36/216 (16%)
Query: 351 AEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREF--------------EMQMEVLG 396
++ LG G+ G K E T K++ + KR+F E ++E+L
Sbjct: 14 SKTLGSGACG-EVKLAFERKTC---KKVAIKIISKRKFAIGSAREADPALNVETEIEILK 69
Query: 397 KIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSL-SALLHGSRGSGRTPLDWDNRMRIALSA 455
K+ H ++ ++ F+ ++D +V + M G L ++ R T + +M +A+
Sbjct: 70 KLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ- 127
Query: 456 ARGLAHLHVSGKIVHGNIKASNILLRPDHDAC---VSDFGLNPLFGNTTPPTRVAG---Y 509
+LH +G I+H ++K N+LL + C ++DFG + + G T+ + G Y
Sbjct: 128 -----YLHENG-IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 181
Query: 510 RAPEV---VETRKVTFKSDVYSFGVLLLELLTGKAP 542
APEV V T D +S GV+L L+G P
Sbjct: 182 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 217
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 99/216 (45%), Gaps = 36/216 (16%)
Query: 351 AEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREF--------------EMQMEVLG 396
++ LG G+ G K E T K++ + KR+F E ++E+L
Sbjct: 15 SKTLGSGACG-EVKLAFERKTC---KKVAIKIISKRKFAIGSAREADPALNVETEIEILK 70
Query: 397 KIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSL-SALLHGSRGSGRTPLDWDNRMRIALSA 455
K+ H ++ ++ F+ ++D +V + M G L ++ R T + +M +A+
Sbjct: 71 KLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ- 128
Query: 456 ARGLAHLHVSGKIVHGNIKASNILLRPDHDAC---VSDFGLNPLFGNTTPPTRVAG---Y 509
+LH +G I+H ++K N+LL + C ++DFG + + G T+ + G Y
Sbjct: 129 -----YLHENG-IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 182
Query: 510 RAPEV---VETRKVTFKSDVYSFGVLLLELLTGKAP 542
APEV V T D +S GV+L L+G P
Sbjct: 183 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 99/216 (45%), Gaps = 36/216 (16%)
Query: 351 AEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREF--------------EMQMEVLG 396
++ LG G+ G K E T K++ + KR+F E ++E+L
Sbjct: 15 SKTLGSGACG-EVKLAFERKTC---KKVAIKIISKRKFAIGSAREADPALNVETEIEILK 70
Query: 397 KIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSL-SALLHGSRGSGRTPLDWDNRMRIALSA 455
K+ H ++ ++ F+ ++D +V + M G L ++ R T + +M +A+
Sbjct: 71 KLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ- 128
Query: 456 ARGLAHLHVSGKIVHGNIKASNILLRPDHDAC---VSDFGLNPLFGNTTPPTRVAG---Y 509
+LH +G I+H ++K N+LL + C ++DFG + + G T+ + G Y
Sbjct: 129 -----YLHENG-IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 182
Query: 510 RAPEV---VETRKVTFKSDVYSFGVLLLELLTGKAP 542
APEV V T D +S GV+L L+G P
Sbjct: 183 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 99/216 (45%), Gaps = 36/216 (16%)
Query: 351 AEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREF--------------EMQMEVLG 396
++ LG G+ G K E T K++ + KR+F E ++E+L
Sbjct: 15 SKTLGSGACG-EVKLAFERKTC---KKVAIKIISKRKFAIGSAREADPALNVETEIEILK 70
Query: 397 KIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSL-SALLHGSRGSGRTPLDWDNRMRIALSA 455
K+ H ++ ++ F+ ++D +V + M G L ++ R T + +M +A+
Sbjct: 71 KLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ- 128
Query: 456 ARGLAHLHVSGKIVHGNIKASNILLRPDHDAC---VSDFGLNPLFGNTTPPTRVAG---Y 509
+LH +G I+H ++K N+LL + C ++DFG + + G T+ + G Y
Sbjct: 129 -----YLHENG-IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 182
Query: 510 RAPEV---VETRKVTFKSDVYSFGVLLLELLTGKAP 542
APEV V T D +S GV+L L+G P
Sbjct: 183 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 94/198 (47%), Gaps = 25/198 (12%)
Query: 355 GKGSVGTSYKAVLEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVVPLRAFY 410
+G V +Y A+LE V +K+L + KR + ++ ++ + H N++ L +
Sbjct: 36 AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGLLNVF 92
Query: 411 YSK------DEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
+ + +V + M A +LS ++ + LD + + G+ HLH
Sbjct: 93 TPQKSLEEFQDVYIVMELMDA-NLSQVI-------QMELDHERMSYLLYQMLVGIKHLHS 144
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT---TPPTRVAGYRAPEVVETRKVT 521
+G I+H ++K SNI+++ D + DFGL G + TP YRAPEV+
Sbjct: 145 AG-IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 203
Query: 522 FKSDVYSFGVLLLELLTG 539
D++S GV++ E++ G
Sbjct: 204 ENVDIWSVGVIMGEMIKG 221
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 99/216 (45%), Gaps = 36/216 (16%)
Query: 351 AEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREF--------------EMQMEVLG 396
++ LG G+ G K E T K++ + KR+F E ++E+L
Sbjct: 21 SKTLGSGACG-EVKLAFERKTC---KKVAIKIISKRKFAIGSAREADPALNVETEIEILK 76
Query: 397 KIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSL-SALLHGSRGSGRTPLDWDNRMRIALSA 455
K+ H ++ ++ F+ ++D +V + M G L ++ R T + +M +A+
Sbjct: 77 KLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ- 134
Query: 456 ARGLAHLHVSGKIVHGNIKASNILLRPDHDAC---VSDFGLNPLFGNTTPPTRVAG---Y 509
+LH +G I+H ++K N+LL + C ++DFG + + G T+ + G Y
Sbjct: 135 -----YLHENG-IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 188
Query: 510 RAPEV---VETRKVTFKSDVYSFGVLLLELLTGKAP 542
APEV V T D +S GV+L L+G P
Sbjct: 189 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 224
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 81/172 (47%), Gaps = 23/172 (13%)
Query: 383 VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTP 442
V + + E ++ +L +I+H NV+ L Y +K + +L+ + + G L L + +
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKES 110
Query: 443 LDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLR----PDHDACVSDFGLNPL-- 496
L + G+ +LH S +I H ++K NI+L P + DFGL
Sbjct: 111 LTEEEATEFLKQILNGVYYLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 497 FGNT------TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAP 542
FGN TP + APE+V + ++D++S GV+ LL+G +P
Sbjct: 170 FGNEFKNIFGTPE-----FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 81/172 (47%), Gaps = 23/172 (13%)
Query: 383 VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTP 442
V + + E ++ +L +I+H NV+ L Y +K + +L+ + + G L L + +
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKES 110
Query: 443 LDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLR----PDHDACVSDFGLNPL-- 496
L + G+ +LH S +I H ++K NI+L P + DFGL
Sbjct: 111 LTEEEATEFLKQILNGVYYLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 497 FGNT------TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAP 542
FGN TP + APE+V + ++D++S GV+ LL+G +P
Sbjct: 170 FGNEFKNIFGTPE-----FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 80/168 (47%), Gaps = 13/168 (7%)
Query: 382 AVGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRT 441
V + E E ++ +L +I+H N++ L + +K + +L+ + + G L L + +
Sbjct: 70 GVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL-----AEKE 124
Query: 442 PLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLR----PDHDACVSDFGLNPLF 497
L D + G+ +LH S +I H ++K NI+L P+ + DFG+
Sbjct: 125 SLTEDEATQFLKQILDGVHYLH-SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI 183
Query: 498 GNTTPPTRVAG---YRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAP 542
+ G + APE+V + ++D++S GV+ LL+G +P
Sbjct: 184 EAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 231
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 81/172 (47%), Gaps = 23/172 (13%)
Query: 383 VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTP 442
V + + E ++ +L +I+H NV+ L Y +K + +L+ + + G L L + +
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKES 110
Query: 443 LDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLR----PDHDACVSDFGLNPL-- 496
L + G+ +LH S +I H ++K NI+L P + DFGL
Sbjct: 111 LTEEEATEFLKQILNGVYYLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 497 FGNT------TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAP 542
FGN TP + APE+V + ++D++S GV+ LL+G +P
Sbjct: 170 FGNEFKNIFGTPE-----FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 80/168 (47%), Gaps = 13/168 (7%)
Query: 382 AVGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRT 441
V + E E ++ +L +I+H N++ L + +K + +L+ + + G L L + +
Sbjct: 49 GVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL-----AEKE 103
Query: 442 PLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLR----PDHDACVSDFGLNPLF 497
L D + G+ +LH S +I H ++K NI+L P+ + DFG+
Sbjct: 104 SLTEDEATQFLKQILDGVHYLH-SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI 162
Query: 498 GNTTPPTRVAG---YRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAP 542
+ G + APE+V + ++D++S GV+ LL+G +P
Sbjct: 163 EAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 210
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 81/172 (47%), Gaps = 23/172 (13%)
Query: 383 VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTP 442
V + + E ++ +L +I+H NV+ L Y +K + +L+ + + G L L + +
Sbjct: 55 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKES 109
Query: 443 LDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLR----PDHDACVSDFGLNPL-- 496
L + G+ +LH S +I H ++K NI+L P + DFGL
Sbjct: 110 LTEEEATEFLKQILNGVYYLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 168
Query: 497 FGNT------TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAP 542
FGN TP + APE+V + ++D++S GV+ LL+G +P
Sbjct: 169 FGNEFKNIFGTPE-----FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 80/167 (47%), Gaps = 13/167 (7%)
Query: 383 VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTP 442
V + E E ++ +L +I+H N++ L + +K + +L+ + + G L L + +
Sbjct: 57 VSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL-----AEKES 111
Query: 443 LDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLR----PDHDACVSDFGLNPLFG 498
L D + G+ +LH S +I H ++K NI+L P+ + DFG+
Sbjct: 112 LTEDEATQFLKQILDGVHYLH-SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE 170
Query: 499 NTTPPTRVAG---YRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAP 542
+ G + APE+V + ++D++S GV+ LL+G +P
Sbjct: 171 AGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 81/172 (47%), Gaps = 23/172 (13%)
Query: 383 VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTP 442
V + + E ++ +L +I+H NV+ L Y +K + +L+ + + G L L + +
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKES 110
Query: 443 LDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLR----PDHDACVSDFGLNPL-- 496
L + G+ +LH S +I H ++K NI+L P + DFGL
Sbjct: 111 LTEEEATEFLKQILNGVYYLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 497 FGNT------TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAP 542
FGN TP + APE+V + ++D++S GV+ LL+G +P
Sbjct: 170 FGNEFKNIFGTPE-----FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 81/172 (47%), Gaps = 23/172 (13%)
Query: 383 VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTP 442
V + + E ++ +L +I+H NV+ L Y +K + +L+ + + G L L + +
Sbjct: 55 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKES 109
Query: 443 LDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLR----PDHDACVSDFGLNPL-- 496
L + G+ +LH S +I H ++K NI+L P + DFGL
Sbjct: 110 LTEEEATEFLKQILNGVYYLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 168
Query: 497 FGNT------TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAP 542
FGN TP + APE+V + ++D++S GV+ LL+G +P
Sbjct: 169 FGNEFKNIFGTPE-----FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 81/172 (47%), Gaps = 23/172 (13%)
Query: 383 VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTP 442
V + + E ++ +L +I+H NV+ L Y +K + +L+ + + G L L + +
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKES 110
Query: 443 LDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLR----PDHDACVSDFGLNPL-- 496
L + G+ +LH S +I H ++K NI+L P + DFGL
Sbjct: 111 LTEEEATEFLKQILNGVYYLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 497 FGNT------TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAP 542
FGN TP + APE+V + ++D++S GV+ LL+G +P
Sbjct: 170 FGNEFKNIFGTPE-----FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 81/172 (47%), Gaps = 23/172 (13%)
Query: 383 VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTP 442
V + + E ++ +L +I+H NV+ L Y +K + +L+ + + G L L + +
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKES 110
Query: 443 LDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLR----PDHDACVSDFGLNPL-- 496
L + G+ +LH S +I H ++K NI+L P + DFGL
Sbjct: 111 LTEEEATEFLKQILNGVYYLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 497 FGNT------TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAP 542
FGN TP + APE+V + ++D++S GV+ LL+G +P
Sbjct: 170 FGNEFKNIFGTPE-----FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 81/172 (47%), Gaps = 23/172 (13%)
Query: 383 VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTP 442
V + + E ++ +L +I+H NV+ L Y +K + +L+ + + G L L + +
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKES 110
Query: 443 LDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLR----PDHDACVSDFGLNPL-- 496
L + G+ +LH S +I H ++K NI+L P + DFGL
Sbjct: 111 LTEEEATEFLKQILNGVYYLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 497 FGNT------TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAP 542
FGN TP + APE+V + ++D++S GV+ LL+G +P
Sbjct: 170 FGNEFKNIFGTPE-----FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 81/172 (47%), Gaps = 23/172 (13%)
Query: 383 VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTP 442
V + + E ++ +L +I+H NV+ L Y +K + +L+ + + G L L + +
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKES 110
Query: 443 LDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLR----PDHDACVSDFGLNPL-- 496
L + G+ +LH S +I H ++K NI+L P + DFGL
Sbjct: 111 LTEEEATEFLKQILNGVYYLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 497 FGNT------TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAP 542
FGN TP + APE+V + ++D++S GV+ LL+G +P
Sbjct: 170 FGNEFKNIFGTPE-----FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 81/172 (47%), Gaps = 23/172 (13%)
Query: 383 VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTP 442
V + + E ++ +L +I+H NV+ L Y +K + +L+ + + G L L + +
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-----AEKES 110
Query: 443 LDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLR----PDHDACVSDFGLNPL-- 496
L + G+ +LH S +I H ++K NI+L P + DFGL
Sbjct: 111 LTEEEATEFLKQILNGVYYLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 497 FGNT------TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAP 542
FGN TP + APE+V + ++D++S GV+ LL+G +P
Sbjct: 170 FGNEFKNIFGTPE-----FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 94/198 (47%), Gaps = 25/198 (12%)
Query: 355 GKGSVGTSYKAVLEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVVPLRAFY 410
+G V +Y A+LE V +K+L + KR + ++ ++ + H N++ L +
Sbjct: 36 AQGIVVAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGLLNVF 92
Query: 411 YSK------DEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
+ + +V + M A +LS ++ + LD + + G+ HLH
Sbjct: 93 TPQKSLEEFQDVYIVMELMDA-NLSQVI-------QMELDHERMSYLLYQMLVGIKHLHS 144
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT---TPPTRVAGYRAPEVVETRKVT 521
+G I+H ++K SNI+++ D + DFGL G + TP YRAPEV+
Sbjct: 145 AG-IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 203
Query: 522 FKSDVYSFGVLLLELLTG 539
D++S GV++ E++ G
Sbjct: 204 ENVDIWSVGVIMGEMIKG 221
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 126/296 (42%), Gaps = 52/296 (17%)
Query: 352 EVLGKGSVG-----TSYKAVLEEGT-TVVVKRLKEVA-VGKREFEM-QMEVLGKI-KHDN 402
+ LG G+ G T+Y + + TV VK LK A + +RE M +++VL + H N
Sbjct: 29 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 88
Query: 403 VVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGS-------------GRTPLDWDNRM 449
+V L L++ +Y G L L R S LD ++ +
Sbjct: 89 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 148
Query: 450 RIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL---------NPLFGNT 500
+ A+G+A L S +H ++ A NILL + DFGL + GN
Sbjct: 149 SFSYQVAKGMAFL-ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 207
Query: 501 TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQ 559
P + + APE + TF+SDV+S+G+ L EL + G +P G+ +
Sbjct: 208 RLPVK---WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP------YPGMPVDSKFY 258
Query: 560 SVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIEN 615
+++E + R + E ++ I C P +RP +++V++IE
Sbjct: 259 KMIKEGF----------RMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 304
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 92/226 (40%), Gaps = 27/226 (11%)
Query: 339 YSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTV--VVKRLKEVAVG------------ 384
Y FD+ + V Y E GT VV R+ E A G
Sbjct: 29 YVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH 88
Query: 385 ---KREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRT 441
K +++ + ++H +V L + +E +++Y++M G L +
Sbjct: 89 ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKV----ADEHN 144
Query: 442 PLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILL--RPDHDACVSDFGLNPLFG- 498
+ D + +GL H+H VH ++K NI+ + ++ + DFGL
Sbjct: 145 KMSEDEAVEYMRQVCKGLCHMH-ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP 203
Query: 499 --NTTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAP 542
+ T A + APEV E + V + +D++S GVL LL+G +P
Sbjct: 204 KQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSP 249
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 92/226 (40%), Gaps = 27/226 (11%)
Query: 339 YSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTV--VVKRLKEVAVG------------ 384
Y FD+ + V Y E GT VV R+ E A G
Sbjct: 135 YVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH 194
Query: 385 ---KREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRT 441
K +++ + ++H +V L + +E +++Y++M G L +
Sbjct: 195 ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKV----ADEHN 250
Query: 442 PLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILL--RPDHDACVSDFGLNPLFG- 498
+ D + +GL H+H VH ++K NI+ + ++ + DFGL
Sbjct: 251 KMSEDEAVEYMRQVCKGLCHMH-ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP 309
Query: 499 --NTTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAP 542
+ T A + APEV E + V + +D++S GVL LL+G +P
Sbjct: 310 KQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSP 355
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 100/229 (43%), Gaps = 33/229 (14%)
Query: 352 EVLGKGSVGTSYKAVLEEGT----TVVVKRLKEVAVGKREFEMQME--VLGKIKHDNVVP 405
+VLG G+ + +L E V +K + + A+ +E M+ E VL KIKH N+V
Sbjct: 24 DVLGTGAFS---EVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 406 LRAFYYSKDEKLLVYDYMPAGSL-SALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
L Y S L+ + G L ++ + R + R+ + +LH
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTER------DASRLIFQVLDAVKYLHD 134
Query: 465 SGKIVHGNIKASNIL---LRPDHDACVSDFGLNPLFGNTTPPTRVA---GYRAPEVVETR 518
G IVH ++K N+L L D +SDFGL+ + + + GY APEV+ +
Sbjct: 135 LG-IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQK 193
Query: 519 KVTFKSDVYSFGVLLLELLTGKAP----NQASLGEEGI------DLPRW 557
+ D +S GV+ LL G P N A L E+ + D P W
Sbjct: 194 PYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYW 242
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 94/211 (44%), Gaps = 29/211 (13%)
Query: 352 EVLGKGSVGTSYKAVL------EEGTTVVVKRLKEVAVG--KREFEMQMEVLGKI-KHDN 402
+ LG G+ G +A + V VK LK A K +++++ + +H+N
Sbjct: 44 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 103
Query: 403 VVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGS------RGSGRTPLDWDNRMRIALSAA 456
+V L L++ +Y G L L + GR PL+ + + + A
Sbjct: 104 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGR-PLELRDLLHFSSQVA 162
Query: 457 RGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNP---------LFGNTTPPTRVA 507
+G+A L S +H ++ A N+LL H A + DFGL + GN P +
Sbjct: 163 QGMAFL-ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK-- 219
Query: 508 GYRAPEVVETRKVTFKSDVYSFGVLLLELLT 538
+ APE + T +SDV+S+G+LL E+ +
Sbjct: 220 -WMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 121/284 (42%), Gaps = 44/284 (15%)
Query: 339 YSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKR-EFEMQMEVLGK 397
Y DL+D + LG+GS K V ++ ++ + KR E Q E+
Sbjct: 10 YDLDLKD------KPLGEGSFSICRKCVHKKSNQAFAVKI----ISKRMEANTQKEITA- 58
Query: 398 IK----HDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIAL 453
+K H N+V L ++ + LV + + G L + + T + MR +
Sbjct: 59 LKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASY--IMRKLV 116
Query: 454 SAARGLAHLHVSGKIVHGNIKASNILLRPDHDAC---VSDFGLNPLFGNTTPPTR----- 505
SA ++H+H G +VH ++K N+L ++D + DFG F PP
Sbjct: 117 SA---VSHMHDVG-VVHRDLKPENLLFTDENDNLEIKIIDFG----FARLKPPDNQPLKT 168
Query: 506 ---VAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVV 562
Y APE++ D++S GV+L +L+G+ P Q+ + + V+ +
Sbjct: 169 PCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSH--DRSLTCTSAVE--I 224
Query: 563 REEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAM 606
++ F E + N+ +E L+Q G ++ P++R M
Sbjct: 225 MKKIKKGDFSFEGEAWKNVSQEAKDLIQ---GLLTVDPNKRLKM 265
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 100/229 (43%), Gaps = 33/229 (14%)
Query: 352 EVLGKGSVGTSYKAVLEEGT----TVVVKRLKEVAVGKREFEMQME--VLGKIKHDNVVP 405
+VLG G+ + +L E V +K + + A+ +E M+ E VL KIKH N+V
Sbjct: 24 DVLGTGAFS---EVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 406 LRAFYYSKDEKLLVYDYMPAGSL-SALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
L Y S L+ + G L ++ + R + R+ + +LH
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTER------DASRLIFQVLDAVKYLHD 134
Query: 465 SGKIVHGNIKASNIL---LRPDHDACVSDFGLNPLFGNTTPPTRVA---GYRAPEVVETR 518
G IVH ++K N+L L D +SDFGL+ + + + GY APEV+ +
Sbjct: 135 LG-IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQK 193
Query: 519 KVTFKSDVYSFGVLLLELLTGKAP----NQASLGEEGI------DLPRW 557
+ D +S GV+ LL G P N A L E+ + D P W
Sbjct: 194 PYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYW 242
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 100/229 (43%), Gaps = 33/229 (14%)
Query: 352 EVLGKGSVGTSYKAVLEEGT----TVVVKRLKEVAVGKREFEMQME--VLGKIKHDNVVP 405
+VLG G+ + +L E V +K + + A+ +E M+ E VL KIKH N+V
Sbjct: 24 DVLGTGAFS---EVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 406 LRAFYYSKDEKLLVYDYMPAGSL-SALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
L Y S L+ + G L ++ + R + R+ + +LH
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTER------DASRLIFQVLDAVKYLHD 134
Query: 465 SGKIVHGNIKASNIL---LRPDHDACVSDFGLNPLFGNTTPPTRVA---GYRAPEVVETR 518
G IVH ++K N+L L D +SDFGL+ + + + GY APEV+ +
Sbjct: 135 LG-IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQK 193
Query: 519 KVTFKSDVYSFGVLLLELLTGKAP----NQASLGEEGI------DLPRW 557
+ D +S GV+ LL G P N A L E+ + D P W
Sbjct: 194 PYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYW 242
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 101/217 (46%), Gaps = 19/217 (8%)
Query: 343 LEDLLRASAEVLGKGSVGTSYKAVLEEGTT--VVVKRLKEVAVGKREFEMQMEVLGKIKH 400
L D +E LG+G+ Y+ ++GT +K LK+ V K+ ++ VL ++ H
Sbjct: 51 LSDFFEVESE-LGRGATSIVYRCK-QKGTQKPYALKVLKK-TVDKKIVRTEIGVLLRLSH 107
Query: 401 DNVVPLRAFYYSKDEKLLVYDYMPAGSL-SALLHGSRGSGRTPLDWDNRMRIALSAARGL 459
N++ L+ + + E LV + + G L ++ S R D ++ +
Sbjct: 108 PNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQI------LEAV 161
Query: 460 AHLHVSGKIVHGNIKASNILLR---PDHDACVSDFGLNPLFGNTTPPTRVAG---YRAPE 513
A+LH +G IVH ++K N+L PD ++DFGL+ + + V G Y APE
Sbjct: 162 AYLHENG-IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPE 220
Query: 514 VVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEE 550
++ + D++S G++ LL G P G++
Sbjct: 221 ILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQ 257
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 94/211 (44%), Gaps = 29/211 (13%)
Query: 352 EVLGKGSVGTSYKAVL------EEGTTVVVKRLKEVAVG--KREFEMQMEVLGKI-KHDN 402
+ LG G+ G +A + V VK LK A K +++++ + +H+N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 403 VVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGS------RGSGRTPLDWDNRMRIALSAA 456
+V L L++ +Y G L L + GR PL+ + + + A
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGR-PLELRDLLHFSSQVA 170
Query: 457 RGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNP---------LFGNTTPPTRVA 507
+G+A L S +H ++ A N+LL H A + DFGL + GN P +
Sbjct: 171 QGMAFL-ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK-- 227
Query: 508 GYRAPEVVETRKVTFKSDVYSFGVLLLELLT 538
+ APE + T +SDV+S+G+LL E+ +
Sbjct: 228 -WMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 81/172 (47%), Gaps = 23/172 (13%)
Query: 383 VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTP 442
V + + E ++ +L +I+H NV+ L Y +K + +L+ + + G L L + +
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFL-----AEKES 110
Query: 443 LDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLR----PDHDACVSDFGLNPL-- 496
L + G+ +LH S +I H ++K NI+L P + DFGL
Sbjct: 111 LTEEEATEFLKQILNGVYYLH-SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
Query: 497 FGNT------TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAP 542
FGN TP + APE+V + ++D++S GV+ LL+G +P
Sbjct: 170 FGNEFKNIFGTPE-----FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 100/229 (43%), Gaps = 33/229 (14%)
Query: 352 EVLGKGSVGTSYKAVLEEGTT----VVVKRLKEVAVGKREFEMQME--VLGKIKHDNVVP 405
+VLG G+ + +L E V +K + + A+ +E M+ E VL KIKH N+V
Sbjct: 24 DVLGTGAFS---EVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 406 LRAFYYSKDEKLLVYDYMPAGSL-SALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
L Y S L+ + G L ++ + R + R+ + +LH
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTER------DASRLIFQVLDAVKYLHD 134
Query: 465 SGKIVHGNIKASNIL---LRPDHDACVSDFGLNPLFGNTTPPTRVA---GYRAPEVVETR 518
G IVH ++K N+L L D +SDFGL+ + + + GY APEV+ +
Sbjct: 135 LG-IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQK 193
Query: 519 KVTFKSDVYSFGVLLLELLTGKAP----NQASLGEEGI------DLPRW 557
+ D +S GV+ LL G P N A L E+ + D P W
Sbjct: 194 PYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYW 242
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 76/170 (44%), Gaps = 10/170 (5%)
Query: 385 KREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLD 444
+ + M++ + + H +VV F+ D +V + SL L H R + P
Sbjct: 59 REKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEA 117
Query: 445 WDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPT 504
+I L G +LH +++H ++K N+ L D + + DFGL
Sbjct: 118 RYYLRQIVL----GCQYLH-RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK 172
Query: 505 RV----AGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEE 550
+V Y APEV+ + +F+ DV+S G ++ LL GK P + S +E
Sbjct: 173 KVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE 222
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 89/198 (44%), Gaps = 25/198 (12%)
Query: 355 GKGSVGTSYKAVLEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVVPLRAFY 410
+G V +Y A+LE V +K+L + KR + ++ ++ + H N++ L +
Sbjct: 36 AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVF 92
Query: 411 YSK------DEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
+ + +V + M A + + LD + + G+ HLH
Sbjct: 93 TPQKSLEEFQDVYIVMELMDANLCQVI--------QMELDHERMSYLLYQMLCGIKHLHS 144
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT---TPPTRVAGYRAPEVVETRKVT 521
+G I+H ++K SNI+++ D + DFGL G + TP YRAPEV+
Sbjct: 145 AG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRYYRAPEVILGMGYK 203
Query: 522 FKSDVYSFGVLLLELLTG 539
D++S G ++ E++ G
Sbjct: 204 ENVDIWSVGCIMGEMIKG 221
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 76/170 (44%), Gaps = 10/170 (5%)
Query: 385 KREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLD 444
+ + M++ + + H +VV F+ D +V + SL L H R + P
Sbjct: 83 REKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEA 141
Query: 445 WDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPT 504
+I L G +LH +++H ++K N+ L D + + DFGL
Sbjct: 142 RYYLRQIVL----GCQYLH-RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK 196
Query: 505 RV----AGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEE 550
+V Y APEV+ + +F+ DV+S G ++ LL GK P + S +E
Sbjct: 197 KVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE 246
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 103/258 (39%), Gaps = 37/258 (14%)
Query: 327 DRNKLVFFEGGVYSF-DLEDLLRASAEV---LGKGSVGTSYKAVLE------EGTTVVVK 376
D N F G S DL+++ R + + LG G+ G Y+ + V VK
Sbjct: 8 DYNPNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVK 67
Query: 377 RLKEVAVGKREFEMQME--VLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHG 434
L EV + E + ME ++ K+ H N+V + ++ + M G L + L
Sbjct: 68 TLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE 127
Query: 435 SRGSGRTP--LDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLR---PDHDACVS 489
+R P L + + +A A G +L +H +I A N LL P A +
Sbjct: 128 TRPRPSQPSSLAMLDLLHVARDIACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIG 186
Query: 490 DFGLNPLFGNTTPPTRVAGYR------------APEVVETRKVTFKSDVYSFGVLLLELL 537
DFG+ R + YR PE T K+D +SFGVLL E+
Sbjct: 187 DFGM------ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 240
Query: 538 T-GKAPNQASLGEEGIDL 554
+ G P + +E ++
Sbjct: 241 SLGYMPYPSKSNQEVLEF 258
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 93/198 (46%), Gaps = 25/198 (12%)
Query: 355 GKGSVGTSYKAVLEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVVPLRAFY 410
+G V +Y A+LE V +K+L + KR + ++ ++ + H N++ L +
Sbjct: 36 AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGLLNVF 92
Query: 411 YSK------DEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
+ + +V + M A +LS ++ + LD + + G+ HLH
Sbjct: 93 TPQKSLEEFQDVYIVMELMDA-NLSQVI-------QMELDHERMSYLLYQMLVGIKHLHS 144
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT---TPPTRVAGYRAPEVVETRKVT 521
+G I+H ++K SNI+++ D + DFGL G + TP YRAPEV+
Sbjct: 145 AG-IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 203
Query: 522 FKSDVYSFGVLLLELLTG 539
D++S G ++ E++ G
Sbjct: 204 ENVDIWSVGCIMGEMIKG 221
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 125/296 (42%), Gaps = 52/296 (17%)
Query: 352 EVLGKGSVG-----TSYKAVLEEGT-TVVVKRLKEVA-VGKREFEM-QMEVLGKI-KHDN 402
+ LG G+ G T+Y + + TV VK LK A + +RE M +++VL + H N
Sbjct: 47 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 106
Query: 403 VVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGS-------------GRTPLDWDNRM 449
+V L L++ +Y G L L R S LD ++ +
Sbjct: 107 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 166
Query: 450 RIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL---------NPLFGNT 500
+ A+G+A L S +H ++ A NILL + DFGL + GN
Sbjct: 167 SFSYQVAKGMAFL-ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 225
Query: 501 TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQ 559
P + + APE + TF+SDV+S+G+ L EL + G +P G+ +
Sbjct: 226 RLPVK---WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP------YPGMPVDSKFY 276
Query: 560 SVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIEN 615
+++E R + E ++ I C P +RP +++V++IE
Sbjct: 277 KMIKEG----------FRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 322
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 102/258 (39%), Gaps = 37/258 (14%)
Query: 327 DRNKLVFFEGGVYSF-DLEDLLRASAEV---LGKGSVGTSYKAVLE------EGTTVVVK 376
D N F G S DL+++ R + + LG G+ G Y+ + V VK
Sbjct: 24 DYNPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVK 83
Query: 377 RLKEVAVGKREFEMQME--VLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHG 434
L EV + E + ME ++ K H N+V + ++ + M G L + L
Sbjct: 84 TLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE 143
Query: 435 SRGSGRTP--LDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLR---PDHDACVS 489
+R P L + + +A A G +L +H +I A N LL P A +
Sbjct: 144 TRPRPSQPSSLAMLDLLHVARDIACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIG 202
Query: 490 DFGLNPLFGNTTPPTRVAGYR------------APEVVETRKVTFKSDVYSFGVLLLELL 537
DFG+ R + YR PE T K+D +SFGVLL E+
Sbjct: 203 DFGM------ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 256
Query: 538 T-GKAPNQASLGEEGIDL 554
+ G P + +E ++
Sbjct: 257 SLGYMPYPSKSNQEVLEF 274
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 104/255 (40%), Gaps = 31/255 (12%)
Query: 327 DRNKLVFFEGGVYSF-DLEDLLRASAEV---LGKGSVGTSYKAVLE------EGTTVVVK 376
D N F G S DL+++ R + + LG G+ G Y+ + V VK
Sbjct: 48 DYNPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVK 107
Query: 377 RLKEVAVGKREFEMQME--VLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHG 434
L EV + E + ME ++ K H N+V + ++ + M G L + L
Sbjct: 108 TLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE 167
Query: 435 SRGSGRTP--LDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLR---PDHDACVS 489
+R P L + + +A A G +L +H +I A N LL P A +
Sbjct: 168 TRPRPSQPSSLAMLDLLHVARDIACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIG 226
Query: 490 DFGL-NPLF--------GNTTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-G 539
DFG+ ++ G P + + PE T K+D +SFGVLL E+ + G
Sbjct: 227 DFGMARDIYRAGYYRKGGCAMLPVK---WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLG 283
Query: 540 KAPNQASLGEEGIDL 554
P + +E ++
Sbjct: 284 YMPYPSKSNQEVLEF 298
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 93/198 (46%), Gaps = 25/198 (12%)
Query: 355 GKGSVGTSYKAVLEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVVPLRAFY 410
+G V +Y A+LE V +K+L + KR + ++ ++ + H N++ L +
Sbjct: 36 AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGLLNVF 92
Query: 411 YSK------DEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
+ + +V + M A +LS ++ + LD + + G+ HLH
Sbjct: 93 TPQKSLEEFQDVYIVMELMDA-NLSQVI-------QMELDHERMSYLLYQMLCGIKHLHS 144
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT---TPPTRVAGYRAPEVVETRKVT 521
+G I+H ++K SNI+++ D + DFGL G + TP YRAPEV+
Sbjct: 145 AG-IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 203
Query: 522 FKSDVYSFGVLLLELLTG 539
D++S G ++ E++ G
Sbjct: 204 ENVDIWSVGCIMGEMIKG 221
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 93/198 (46%), Gaps = 25/198 (12%)
Query: 355 GKGSVGTSYKAVLEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVVPLRAFY 410
+G V +Y A+LE V +K+L + KR + ++ ++ + H N++ L +
Sbjct: 36 AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVF 92
Query: 411 YSK------DEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
+ + +V + M A +LS ++ + LD + + G+ HLH
Sbjct: 93 TPQKSLEEFQDVYIVMELMDA-NLSQVI-------QMELDHERMSYLLYQMLCGIKHLHS 144
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT---TPPTRVAGYRAPEVVETRKVT 521
+G I+H ++K SNI+++ D + DFGL G + TP YRAPEV+
Sbjct: 145 AG-IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 203
Query: 522 FKSDVYSFGVLLLELLTG 539
D++S G ++ E++ G
Sbjct: 204 ENVDIWSVGCIMGEMIKG 221
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 89/198 (44%), Gaps = 25/198 (12%)
Query: 355 GKGSVGTSYKAVLEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVVPLRAFY 410
+G V +Y A+LE V +K+L + KR + ++ ++ + H N++ L +
Sbjct: 36 AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVF 92
Query: 411 YSK------DEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
+ + +V + M A + + LD + + G+ HLH
Sbjct: 93 TPQKSLEEFQDVYIVMELMDANLCQVI--------QMELDHERMSYLLYQMLCGIKHLHS 144
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT---TPPTRVAGYRAPEVVETRKVT 521
+G I+H ++K SNI+++ D + DFGL G + TP YRAPEV+
Sbjct: 145 AG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 203
Query: 522 FKSDVYSFGVLLLELLTG 539
D++S G ++ E++ G
Sbjct: 204 ENVDIWSVGCIMGEMIKG 221
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 76/170 (44%), Gaps = 10/170 (5%)
Query: 385 KREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLD 444
+ + M++ + + H +VV F+ D +V + SL L H R + P
Sbjct: 85 REKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEA 143
Query: 445 WDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPT 504
+I L G +LH +++H ++K N+ L D + + DFGL
Sbjct: 144 RYYLRQIVL----GCQYLH-RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK 198
Query: 505 RV----AGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEE 550
+V Y APEV+ + +F+ DV+S G ++ LL GK P + S +E
Sbjct: 199 KVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE 248
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 89/198 (44%), Gaps = 25/198 (12%)
Query: 355 GKGSVGTSYKAVLEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVVPLRAFY 410
+G V +Y A+LE V +K+L + KR + ++ ++ + H N++ L +
Sbjct: 37 AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVF 93
Query: 411 YSK------DEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
+ + +V + M A + + LD + + G+ HLH
Sbjct: 94 TPQKSLEEFQDVYIVMELMDANLCQVI--------QMELDHERMSYLLYQMLCGIKHLHS 145
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT---TPPTRVAGYRAPEVVETRKVT 521
+G I+H ++K SNI+++ D + DFGL G + TP YRAPEV+
Sbjct: 146 AG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 204
Query: 522 FKSDVYSFGVLLLELLTG 539
D++S G ++ E++ G
Sbjct: 205 ENVDIWSVGCIMGEMIKG 222
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 102/255 (40%), Gaps = 31/255 (12%)
Query: 327 DRNKLVFFEGGVYSF-DLEDLLRASAEV---LGKGSVGTSYKAVLE------EGTTVVVK 376
D N F G S DL+++ R + + LG G+ G Y+ + V VK
Sbjct: 8 DYNPNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVK 67
Query: 377 RLKEVAVGKREFEMQME--VLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHG 434
L EV + E + ME ++ K H N+V + ++ + M G L + L
Sbjct: 68 TLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE 127
Query: 435 SRGSGRTP--LDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLR---PDHDACVS 489
+R P L + + +A A G +L +H +I A N LL P A +
Sbjct: 128 TRPRPSQPSSLAMLDLLHVARDIACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIG 186
Query: 490 DFGLNPLF---------GNTTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-G 539
DFG+ G P + + PE T K+D +SFGVLL E+ + G
Sbjct: 187 DFGMAQDIYRASYYRKGGCAMLPVK---WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLG 243
Query: 540 KAPNQASLGEEGIDL 554
P + +E ++
Sbjct: 244 YMPYPSKSNQEVLEF 258
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 102/255 (40%), Gaps = 31/255 (12%)
Query: 327 DRNKLVFFEGGVYSF-DLEDLLRASAEV---LGKGSVGTSYKAVLE------EGTTVVVK 376
D N F G S DL+++ R + + LG G+ G Y+ + V VK
Sbjct: 25 DYNPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVK 84
Query: 377 RLKEVAVGKREFEMQME--VLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHG 434
L EV + E + ME ++ K H N+V + ++ + M G L + L
Sbjct: 85 TLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE 144
Query: 435 SRGSGRTP--LDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLR---PDHDACVS 489
+R P L + + +A A G +L +H +I A N LL P A +
Sbjct: 145 TRPRPSQPSSLAMLDLLHVARDIACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIG 203
Query: 490 DFGLNPLF---------GNTTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-G 539
DFG+ G P + + PE T K+D +SFGVLL E+ + G
Sbjct: 204 DFGMARDIYRAGYYRKGGCAMLPVK---WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLG 260
Query: 540 KAPNQASLGEEGIDL 554
P + +E ++
Sbjct: 261 YMPYPSKSNQEVLEF 275
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 125/296 (42%), Gaps = 52/296 (17%)
Query: 352 EVLGKGSVG-----TSYKAVLEEGT-TVVVKRLKEVA-VGKREFEM-QMEVLGKI-KHDN 402
+ LG G+ G T+Y + + TV VK LK A + +RE M +++VL + H N
Sbjct: 52 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 111
Query: 403 VVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGS-------------GRTPLDWDNRM 449
+V L L++ +Y G L L R S LD ++ +
Sbjct: 112 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 171
Query: 450 RIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL---------NPLFGNT 500
+ A+G+A L S +H ++ A NILL + DFGL + GN
Sbjct: 172 SFSYQVAKGMAFL-ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 230
Query: 501 TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQ 559
P + + APE + TF+SDV+S+G+ L EL + G +P G+ +
Sbjct: 231 RLPVK---WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP------YPGMPVDSKFY 281
Query: 560 SVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIEN 615
+++E R + E ++ I C P +RP +++V++IE
Sbjct: 282 KMIKEG----------FRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 327
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 122/292 (41%), Gaps = 47/292 (16%)
Query: 351 AEVLGKGSVGTSYKAVLEEGT-TVVVKRLKEVA-VGKREFEM-QMEVLGKI-KHDNVVPL 406
A GK T+Y + + TV VK LK A + +RE M +++VL + H N+V L
Sbjct: 49 AGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNL 108
Query: 407 RAFYYSKDEKLLVYDYMPAGSLSALLHGSRGS-------------GRTPLDWDNRMRIAL 453
L++ +Y G L L R S LD ++ + +
Sbjct: 109 LGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSY 168
Query: 454 SAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLN---------PLFGNTTPPT 504
A+G+A L S +H ++ A NILL + DFGL + GN P
Sbjct: 169 QVAKGMAFL-ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPV 227
Query: 505 RVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVR 563
+ + APE + TF+SDV+S+G+ L EL + G +P G+ + +++
Sbjct: 228 K---WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP------YPGMPVDSKFYKMIK 278
Query: 564 EEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIEN 615
E R + E ++ I C P +RP +++V++IE
Sbjct: 279 EG----------FRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 320
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 89/199 (44%), Gaps = 25/199 (12%)
Query: 355 GKGSVGTSYKAVLEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVVPLRAFY 410
+G V +Y AVL+ V +K+L + KR + ++ ++ + H N++ L +
Sbjct: 36 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIISLLNVF 92
Query: 411 YSK------DEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
+ + LV + M A + + LD + + G+ HLH
Sbjct: 93 TPQKTLEEFQDVYLVMELMDANLXQVI--------QMELDHERMSYLLYQMLXGIKHLHS 144
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT---TPPTRVAGYRAPEVVETRKVT 521
+G I+H ++K SNI+++ D + DFGL G + TP YRAPEV+
Sbjct: 145 AG-IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 203
Query: 522 FKSDVYSFGVLLLELLTGK 540
D++S G ++ E++ K
Sbjct: 204 ENVDIWSVGCIMGEMVRHK 222
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 93/198 (46%), Gaps = 25/198 (12%)
Query: 355 GKGSVGTSYKAVLEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVVPLRAFY 410
+G V +Y A+LE V +K+L + KR + ++ ++ + H N++ L +
Sbjct: 36 AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVF 92
Query: 411 YSK------DEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
+ + +V + M A +LS ++ + LD + + G+ HLH
Sbjct: 93 TPQKSLEEFQDVYIVMELMDA-NLSQVI-------QMELDHERMSYLLYQMLCGIKHLHS 144
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT---TPPTRVAGYRAPEVVETRKVT 521
+G I+H ++K SNI+++ D + DFGL G + TP YRAPEV+
Sbjct: 145 AG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 203
Query: 522 FKSDVYSFGVLLLELLTG 539
D++S G ++ E++ G
Sbjct: 204 ENVDIWSVGCIMGEMIKG 221
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 89/199 (44%), Gaps = 25/199 (12%)
Query: 355 GKGSVGTSYKAVLEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVVPLRAFY 410
+G V +Y AVL+ V +K+L + KR + ++ ++ + H N++ L +
Sbjct: 36 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIISLLNVF 92
Query: 411 YSK------DEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
+ + LV + M A + + LD + + G+ HLH
Sbjct: 93 TPQKTLEEFQDVYLVMELMDANLCQVI--------QMELDHERMSYLLYQMLCGIKHLHS 144
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT---TPPTRVAGYRAPEVVETRKVT 521
+G I+H ++K SNI+++ D + DFGL G + TP YRAPEV+
Sbjct: 145 AG-IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 203
Query: 522 FKSDVYSFGVLLLELLTGK 540
D++S G ++ E++ K
Sbjct: 204 ENVDIWSVGCIMGEMVRHK 222
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 125/296 (42%), Gaps = 52/296 (17%)
Query: 352 EVLGKGSVG-----TSYKAVLEEGT-TVVVKRLKEVA-VGKREFEM-QMEVLGKI-KHDN 402
+ LG G+ G T+Y + + TV VK LK A + +RE M +++VL + H N
Sbjct: 52 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 111
Query: 403 VVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGS-------------GRTPLDWDNRM 449
+V L L++ +Y G L L R S LD ++ +
Sbjct: 112 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 171
Query: 450 RIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL---------NPLFGNT 500
+ A+G+A L S +H ++ A NILL + DFGL + GN
Sbjct: 172 SFSYQVAKGMAFL-ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNA 230
Query: 501 TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQ 559
P + + APE + TF+SDV+S+G+ L EL + G +P G+ +
Sbjct: 231 RLPVK---WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP------YPGMPVDSKFY 281
Query: 560 SVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIEN 615
+++E R + E ++ I C P +RP +++V++IE
Sbjct: 282 KMIKEG----------FRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 327
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 89/198 (44%), Gaps = 25/198 (12%)
Query: 355 GKGSVGTSYKAVLEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVVPLRAFY 410
+G V +Y A+LE V +K+L + KR + ++ ++ + H N++ L +
Sbjct: 36 AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVF 92
Query: 411 YSK------DEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
+ + +V + M A + + LD + + G+ HLH
Sbjct: 93 TPQKSLEEFQDVYIVMELMDANLCQVI--------QMELDHERMSYLLYQMLCGIKHLHS 144
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT---TPPTRVAGYRAPEVVETRKVT 521
+G I+H ++K SNI+++ D + DFGL G + TP YRAPEV+
Sbjct: 145 AG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 203
Query: 522 FKSDVYSFGVLLLELLTG 539
D++S G ++ E++ G
Sbjct: 204 ENVDIWSVGCIMGEMIKG 221
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 102/258 (39%), Gaps = 37/258 (14%)
Query: 327 DRNKLVFFEGGVYSF-DLEDLLRASAEV---LGKGSVGTSYKAVLE------EGTTVVVK 376
D N F G S DL+++ R + + LG G+ G Y+ + V VK
Sbjct: 8 DYNPNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVK 67
Query: 377 RLKEVAVGKREFEMQME--VLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHG 434
L EV + E + ME ++ K H N+V + ++ + M G L + L
Sbjct: 68 TLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE 127
Query: 435 SRGSGRTP--LDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLR---PDHDACVS 489
+R P L + + +A A G +L +H +I A N LL P A +
Sbjct: 128 TRPRPSQPSSLAMLDLLHVARDIACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIG 186
Query: 490 DFGLNPLFGNTTPPTRVAGYR------------APEVVETRKVTFKSDVYSFGVLLLELL 537
DFG+ R + YR PE T K+D +SFGVLL E+
Sbjct: 187 DFGM------ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 240
Query: 538 T-GKAPNQASLGEEGIDL 554
+ G P + +E ++
Sbjct: 241 SLGYMPYPSKSNQEVLEF 258
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 97/212 (45%), Gaps = 18/212 (8%)
Query: 342 DLEDLLRASAEVLGKGSVGTSYKAV-LEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKH 400
DLE ++ LG+G+ G K + G + VKR++ + + + M++ ++
Sbjct: 52 DLEPIME-----LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRT 106
Query: 401 DNVVPLRAFY---YSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAAR 457
+ FY + + + + + M SL G+T + D +IA+S +
Sbjct: 107 VDCPFTVTFYGALFREGDVWICMELMDT-SLDKFYKQVIDKGQT-IPEDILGKIAVSIVK 164
Query: 458 GLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG---YRAPEV 514
L HLH ++H ++K SN+L+ + DFG++ ++ T AG Y APE
Sbjct: 165 ALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPER 224
Query: 515 V----ETRKVTFKSDVYSFGVLLLELLTGKAP 542
+ + + KSD++S G+ ++EL + P
Sbjct: 225 INPELNQKGYSVKSDIWSLGITMIELAILRFP 256
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 90/201 (44%), Gaps = 23/201 (11%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSK 413
LG+GS G ++ +E+ T +K+V + E M G + +VPL
Sbjct: 82 LGRGSFGEVHR--MEDKQTGFQCAVKKVRLEVFRAEELMACAG-LTSPRIVPLYGAVREG 138
Query: 414 DEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNI 473
+ + + GSL L+ + G P D + A GL +LH S +I+HG++
Sbjct: 139 PWVNIFMELLEGGSLGQLV---KEQGCLPED--RALYYLGQALEGLEYLH-SRRILHGDV 192
Query: 474 KASNILLRPD-HDACVSDFG----LNP-------LFGNTTPPTRVAGYRAPEVVETRKVT 521
KA N+LL D A + DFG L P L G+ P T + APEVV R
Sbjct: 193 KADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTET--HMAPEVVLGRSCD 250
Query: 522 FKSDVYSFGVLLLELLTGKAP 542
K DV+S ++L +L G P
Sbjct: 251 AKVDVWSSCCMMLHMLNGCHP 271
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 102/258 (39%), Gaps = 37/258 (14%)
Query: 327 DRNKLVFFEGGVYSF-DLEDLLRASAEV---LGKGSVGTSYKAVLE------EGTTVVVK 376
D N F G S DL+++ R + + LG G+ G Y+ + V VK
Sbjct: 14 DYNPNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVK 73
Query: 377 RLKEVAVGKREFEMQME--VLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHG 434
L EV + E + ME ++ K H N+V + ++ + M G L + L
Sbjct: 74 TLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE 133
Query: 435 SRGSGRTP--LDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLR---PDHDACVS 489
+R P L + + +A A G +L +H +I A N LL P A +
Sbjct: 134 TRPRPSQPSSLAMLDLLHVARDIACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIG 192
Query: 490 DFGLNPLFGNTTPPTRVAGYR------------APEVVETRKVTFKSDVYSFGVLLLELL 537
DFG+ R + YR PE T K+D +SFGVLL E+
Sbjct: 193 DFGM------ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 246
Query: 538 T-GKAPNQASLGEEGIDL 554
+ G P + +E ++
Sbjct: 247 SLGYMPYPSKSNQEVLEF 264
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 98/242 (40%), Gaps = 36/242 (14%)
Query: 342 DLEDLLRASAEV---LGKGSVGTSYKAVLE------EGTTVVVKRLKEVAVGKREFEMQM 392
DL+++ R + + LG G+ G Y+ + V VK L EV + E + M
Sbjct: 38 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 97
Query: 393 E--VLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTP--LDWDNR 448
E ++ K+ H N+V + ++ + M G L + L +R P L +
Sbjct: 98 EALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 157
Query: 449 MRIALSAARGLAHLHVSGKIVHGNIKASNILLR---PDHDACVSDFGLNPLFGNTTPPTR 505
+ +A A G +L +H +I A N LL P A + DFG+ R
Sbjct: 158 LHVARDIACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM------ARDIYR 210
Query: 506 VAGYR------------APEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGI 552
+ YR PE T K+D +SFGVLL E+ + G P + +E +
Sbjct: 211 ASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 270
Query: 553 DL 554
+
Sbjct: 271 EF 272
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 89/199 (44%), Gaps = 25/199 (12%)
Query: 355 GKGSVGTSYKAVLEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVVPLRAFY 410
+G V +Y AVL+ V +K+L + KR + ++ ++ + H N++ L +
Sbjct: 36 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIISLLNVF 92
Query: 411 YSK------DEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
+ + LV + M A + + LD + + G+ HLH
Sbjct: 93 TPQKTLEEFQDVYLVMELMDANLXQVI--------QMELDHERMSYLLYQMLCGIKHLHS 144
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT---TPPTRVAGYRAPEVVETRKVT 521
+G I+H ++K SNI+++ D + DFGL G + TP YRAPEV+
Sbjct: 145 AG-IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 203
Query: 522 FKSDVYSFGVLLLELLTGK 540
D++S G ++ E++ K
Sbjct: 204 ENVDIWSVGCIMGEMVRHK 222
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 94/215 (43%), Gaps = 25/215 (11%)
Query: 339 YSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVV-VKRLKEVAVGKREFEMQM----E 393
++ D D++R LGKG G Y A ++ ++ +K L + + K E Q+ E
Sbjct: 11 FTIDDFDIVRP----LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIE 66
Query: 394 VLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIAL 453
+ ++H N++ + +++ + L+ ++ P G L L + GR D
Sbjct: 67 IQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL---QKHGR--FDEQRSATFME 121
Query: 454 SAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTR------VA 507
A L + H K++H +IK N+L+ + ++DFG + P R
Sbjct: 122 ELADALHYCH-ERKVIHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGTL 176
Query: 508 GYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAP 542
Y PE++E + K D++ GVL E L G P
Sbjct: 177 DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPP 211
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 89/199 (44%), Gaps = 25/199 (12%)
Query: 355 GKGSVGTSYKAVLEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVVPLRAFY 410
+G V +Y AVL+ V +K+L + KR + ++ ++ + H N++ L +
Sbjct: 74 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVF 130
Query: 411 YSK------DEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
+ + LV + M A + + LD + + G+ HLH
Sbjct: 131 TPQKTLEEFQDVYLVMELMDANLCQVI--------QMELDHERMSYLLYQMLCGIKHLHS 182
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT---TPPTRVAGYRAPEVVETRKVT 521
+G I+H ++K SNI+++ D + DFGL G + TP YRAPEV+
Sbjct: 183 AG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 241
Query: 522 FKSDVYSFGVLLLELLTGK 540
D++S G ++ E++ K
Sbjct: 242 ENVDIWSVGCIMGEMVRHK 260
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 102/258 (39%), Gaps = 37/258 (14%)
Query: 327 DRNKLVFFEGGVYSF-DLEDLLRASAEV---LGKGSVGTSYKAVLE------EGTTVVVK 376
D N F G S DL+++ R + + LG G+ G Y+ + V VK
Sbjct: 34 DYNPNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVK 93
Query: 377 RLKEVAVGKREFEMQME--VLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHG 434
L EV + E + ME ++ K H N+V + ++ + M G L + L
Sbjct: 94 TLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE 153
Query: 435 SRGSGRTP--LDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLR---PDHDACVS 489
+R P L + + +A A G +L +H +I A N LL P A +
Sbjct: 154 TRPRPSQPSSLAMLDLLHVARDIACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIG 212
Query: 490 DFGLNPLFGNTTPPTRVAGYRA------------PEVVETRKVTFKSDVYSFGVLLLELL 537
DFG+ R + YR PE T K+D +SFGVLL E+
Sbjct: 213 DFGM------ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 266
Query: 538 T-GKAPNQASLGEEGIDL 554
+ G P + +E ++
Sbjct: 267 SLGYMPYPSKSNQEVLEF 284
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 97/201 (48%), Gaps = 14/201 (6%)
Query: 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLK---EVAVGKREFEMQMEVLGKIKHDNVVP 405
E +G+G+ G YKA + G V +K+++ E ++ +L ++ H N+V
Sbjct: 14 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 73
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
L +++++ LV++++ L + S +G PL L +GLA H S
Sbjct: 74 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIKSYLFQL--LQGLAFCH-S 128
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLFG----NTTPPTRVAGYRAPEVVETRK-V 520
+++H ++K N+L+ + ++DFGL FG T YRAPE++ K
Sbjct: 129 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYY 188
Query: 521 TFKSDVYSFGVLLLELLTGKA 541
+ D++S G + E++T +A
Sbjct: 189 STAVDIWSLGCIFAEMVTRRA 209
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 90/201 (44%), Gaps = 23/201 (11%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSK 413
LG+GS G ++ +E+ T +K+V + E M G + +VPL
Sbjct: 101 LGRGSFGEVHR--MEDKQTGFQCAVKKVRLEVFRAEELMACAG-LTSPRIVPLYGAVREG 157
Query: 414 DEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNI 473
+ + + GSL L+ + G P D + A GL +LH S +I+HG++
Sbjct: 158 PWVNIFMELLEGGSLGQLV---KEQGCLPED--RALYYLGQALEGLEYLH-SRRILHGDV 211
Query: 474 KASNILLRPD-HDACVSDFG----LNP-------LFGNTTPPTRVAGYRAPEVVETRKVT 521
KA N+LL D A + DFG L P L G+ P T + APEVV R
Sbjct: 212 KADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTET--HMAPEVVLGRSCD 269
Query: 522 FKSDVYSFGVLLLELLTGKAP 542
K DV+S ++L +L G P
Sbjct: 270 AKVDVWSSCCMMLHMLNGCHP 290
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 89/206 (43%), Gaps = 21/206 (10%)
Query: 352 EVLGKGSVGTSYKAV-----LEEGTTVVVKRLKEVA---VGKREFEMQMEVLGKIKHDNV 403
E LG G K LE + KR + V + E E ++ +L ++ H NV
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 404 VPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLH 463
+ L Y ++ + +L+ + + G L L + + L + G+ +LH
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFL-----AQKESLSEEEATSFIKQILDGVNYLH 132
Query: 464 VSGKIVHGNIKASNILLR----PDHDACVSDFGLNPLFGNTTPPTRVAG---YRAPEVVE 516
+ KI H ++K NI+L P + DFGL + + G + APE+V
Sbjct: 133 -TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVN 191
Query: 517 TRKVTFKSDVYSFGVLLLELLTGKAP 542
+ ++D++S GV+ LL+G +P
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 89/206 (43%), Gaps = 21/206 (10%)
Query: 352 EVLGKGSVGTSYKAV-----LEEGTTVVVKRLKEVA---VGKREFEMQMEVLGKIKHDNV 403
E LG G K LE + KR + V + E E ++ +L ++ H NV
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 404 VPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLH 463
+ L Y ++ + +L+ + + G L L + + L + G+ +LH
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFL-----AQKESLSEEEATSFIKQILDGVNYLH 132
Query: 464 VSGKIVHGNIKASNILLR----PDHDACVSDFGLNPLFGNTTPPTRVAG---YRAPEVVE 516
+ KI H ++K NI+L P + DFGL + + G + APE+V
Sbjct: 133 -TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVN 191
Query: 517 TRKVTFKSDVYSFGVLLLELLTGKAP 542
+ ++D++S GV+ LL+G +P
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 89/199 (44%), Gaps = 25/199 (12%)
Query: 355 GKGSVGTSYKAVLEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVVPLRAFY 410
+G V +Y AVL+ V +K+L + KR + ++ ++ + H N++ L +
Sbjct: 36 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVF 92
Query: 411 YSK------DEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
+ + LV + M A + + LD + + G+ HLH
Sbjct: 93 TPQKTLEEFQDVYLVMELMDANLXQVI--------QMELDHERMSYLLYQMLXGIKHLHS 144
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT---TPPTRVAGYRAPEVVETRKVT 521
+G I+H ++K SNI+++ D + DFGL G + TP YRAPEV+
Sbjct: 145 AG-IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 203
Query: 522 FKSDVYSFGVLLLELLTGK 540
D++S G ++ E++ K
Sbjct: 204 ENVDIWSVGCIMGEMVRHK 222
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 97/201 (48%), Gaps = 14/201 (6%)
Query: 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLK---EVAVGKREFEMQMEVLGKIKHDNVVP 405
E +G+G+ G YKA + G V +K+++ E ++ +L ++ H N+V
Sbjct: 8 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 67
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
L +++++ LV++++ L + S +G PL L +GLA H S
Sbjct: 68 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIKSYLFQL--LQGLAFCH-S 122
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLFG----NTTPPTRVAGYRAPEV-VETRKV 520
+++H ++K N+L+ + ++DFGL FG T YRAPE+ + +
Sbjct: 123 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 182
Query: 521 TFKSDVYSFGVLLLELLTGKA 541
+ D++S G + E++T +A
Sbjct: 183 STAVDIWSLGCIFAEMVTRRA 203
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 21/200 (10%)
Query: 354 LGKGSVGTSYKAVLEEGTTVV-VKRLKEVAVGKREFEMQM----EVLGKIKHDNVVPLRA 408
LGKG G Y A ++ ++ +K L + + K E Q+ E+ ++H N++ +
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 409 FYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKI 468
+++ + L+ ++ P G L L + GR D A L + H K+
Sbjct: 83 YFHDRKRIYLMLEFAPRGELYKEL---QKHGR--FDEQRSATFMEELADALHYCH-ERKV 136
Query: 469 VHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTR------VAGYRAPEVVETRKVTF 522
+H +IK N+L+ + ++DFG + P R Y PE++E +
Sbjct: 137 IHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDE 192
Query: 523 KSDVYSFGVLLLELLTGKAP 542
K D++ GVL E L G P
Sbjct: 193 KVDLWCAGVLCYEFLVGMPP 212
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 89/198 (44%), Gaps = 25/198 (12%)
Query: 355 GKGSVGTSYKAVLEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVVPLRAFY 410
+G V ++ VL G V VK+L + KR + ++ +L + H N++ L +
Sbjct: 36 AQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAYR-ELVLLKCVNHKNIISLLNVF 92
Query: 411 YSK------DEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
+ + LV + M A +L ++H LD + + G+ HLH
Sbjct: 93 TPQKTLEEFQDVYLVMELMDA-NLCQVIHME-------LDHERMSYLLYQMLCGIKHLHS 144
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN---TTPPTRVAGYRAPEVVETRKVT 521
+G I+H ++K SNI+++ D + DFGL TP YRAPEV+
Sbjct: 145 AG-IIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYA 203
Query: 522 FKSDVYSFGVLLLELLTG 539
D++S G ++ EL+ G
Sbjct: 204 ANVDIWSVGCIMGELVKG 221
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 102/209 (48%), Gaps = 16/209 (7%)
Query: 342 DLEDLLRASAEVLGKGSVGTSYKAVLE-EGTTVVVKRLK---EVAVGKREFEMQMEVLGK 397
D+E+ + E +G+G+ G YKA + G V +K+++ E ++ +L +
Sbjct: 5 DMENFQKV--EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 62
Query: 398 IKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAAR 457
+ H N+V L +++++ LV++++ L + S +G PL L +
Sbjct: 63 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIKSYLFQL--LQ 118
Query: 458 GLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFG----NTTPPTRVAGYRAPE 513
GLA H S +++H ++K N+L+ + ++DFGL FG T YRAPE
Sbjct: 119 GLAFCH-SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 177
Query: 514 V-VETRKVTFKSDVYSFGVLLLELLTGKA 541
+ + + + D++S G + E++T +A
Sbjct: 178 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA 206
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 89/199 (44%), Gaps = 25/199 (12%)
Query: 355 GKGSVGTSYKAVLEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVVPLRAFY 410
+G V +Y AVL+ V +K+L + KR + ++ ++ + H N++ L +
Sbjct: 29 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVF 85
Query: 411 YSK------DEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
+ + LV + M A + + LD + + G+ HLH
Sbjct: 86 TPQKTLEEFQDVYLVMELMDANLXQVI--------QMELDHERMSYLLYQMLXGIKHLHS 137
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT---TPPTRVAGYRAPEVVETRKVT 521
+G I+H ++K SNI+++ D + DFGL G + TP YRAPEV+
Sbjct: 138 AG-IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 196
Query: 522 FKSDVYSFGVLLLELLTGK 540
D++S G ++ E++ K
Sbjct: 197 ENVDIWSVGCIMGEMVRHK 215
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 13/167 (7%)
Query: 383 VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTP 442
V + E E ++ +L ++ H NV+ L Y ++ + +L+ + + G L L + +
Sbjct: 57 VSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-----AQKES 111
Query: 443 LDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLR----PDHDACVSDFGLNPLFG 498
L + G+ +LH + KI H ++K NI+L P + DFGL
Sbjct: 112 LSEEEATSFIKQILDGVNYLH-TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170
Query: 499 NTTPPTRVAG---YRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAP 542
+ + G + APE+V + ++D++S GV+ LL+G +P
Sbjct: 171 DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 97/201 (48%), Gaps = 14/201 (6%)
Query: 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLK---EVAVGKREFEMQMEVLGKIKHDNVVP 405
E +G+G+ G YKA + G V +K+++ E ++ +L ++ H N+V
Sbjct: 7 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
L +++++ LV++++ L + S +G PL L +GLA H S
Sbjct: 67 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIKSYLFQL--LQGLAFCH-S 121
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLFG----NTTPPTRVAGYRAPEVVETRK-V 520
+++H ++K N+L+ + ++DFGL FG T YRAPE++ K
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYY 181
Query: 521 TFKSDVYSFGVLLLELLTGKA 541
+ D++S G + E++T +A
Sbjct: 182 STAVDIWSLGCIFAEMVTRRA 202
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 94/212 (44%), Gaps = 28/212 (13%)
Query: 355 GKGSVGTSYKAVLEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVVPLRAFY 410
+G V ++ VL G V VK+L + KR + ++ +L + H N++ L +
Sbjct: 34 AQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAYR-ELVLLKCVNHKNIISLLNVF 90
Query: 411 YSK------DEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
+ + LV + M A +L ++H LD + + G+ HLH
Sbjct: 91 TPQKTLEEFQDVYLVMELMDA-NLCQVIHME-------LDHERMSYLLYQMLCGIKHLHS 142
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN---TTPPTRVAGYRAPEVVETRKVT 521
+G I+H ++K SNI+++ D + DFGL TP YRAPEV+
Sbjct: 143 AG-IIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTRYYRAPEVILGMGYK 201
Query: 522 FKSDVYSFGVLLLELLTGKAPNQASLGEEGID 553
D++S G ++ EL+ G Q G + ID
Sbjct: 202 ENVDIWSVGCIMGELVKGSVIFQ---GTDHID 230
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 97/201 (48%), Gaps = 14/201 (6%)
Query: 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLK---EVAVGKREFEMQMEVLGKIKHDNVVP 405
E +G+G+ G YKA + G V +K+++ E ++ +L ++ H N+V
Sbjct: 14 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 73
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
L +++++ LV++++ L + S +G PL L +GLA H S
Sbjct: 74 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIKSYLFQL--LQGLAFCH-S 128
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLFG----NTTPPTRVAGYRAPEV-VETRKV 520
+++H ++K N+L+ + ++DFGL FG T YRAPE+ + +
Sbjct: 129 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 188
Query: 521 TFKSDVYSFGVLLLELLTGKA 541
+ D++S G + E++T +A
Sbjct: 189 STAVDIWSLGCIFAEMVTRRA 209
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 13/167 (7%)
Query: 383 VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTP 442
V + E E ++ +L ++ H NV+ L Y ++ + +L+ + + G L L + +
Sbjct: 57 VSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-----AQKES 111
Query: 443 LDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLR----PDHDACVSDFGLNPLFG 498
L + G+ +LH + KI H ++K NI+L P + DFGL
Sbjct: 112 LSEEEATSFIKQILDGVNYLH-TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170
Query: 499 NTTPPTRVAG---YRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAP 542
+ + G + APE+V + ++D++S GV+ LL+G +P
Sbjct: 171 DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 97/201 (48%), Gaps = 14/201 (6%)
Query: 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLK---EVAVGKREFEMQMEVLGKIKHDNVVP 405
E +G+G+ G YKA + G V +K+++ E ++ +L ++ H N+V
Sbjct: 6 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 65
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
L +++++ LV++++ L + S +G PL L +GLA H S
Sbjct: 66 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIKSYLFQL--LQGLAFCH-S 120
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLFG----NTTPPTRVAGYRAPEV-VETRKV 520
+++H ++K N+L+ + ++DFGL FG T YRAPE+ + +
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 521 TFKSDVYSFGVLLLELLTGKA 541
+ D++S G + E++T +A
Sbjct: 181 STAVDIWSLGCIFAEMVTRRA 201
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 55/112 (49%), Gaps = 9/112 (8%)
Query: 447 NRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNP-------LFGN 499
N + + + G+ +L S VH ++ A N+LL H A +SDFGL+ +
Sbjct: 108 NIIELVHQVSMGMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 166
Query: 500 TTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEE 550
T + APE + K + KSDV+SFGVL+ E + G+ P + G E
Sbjct: 167 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 218
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 13/167 (7%)
Query: 383 VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTP 442
V + E E ++ +L ++ H NV+ L Y ++ + +L+ + + G L L + +
Sbjct: 57 VSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-----AQKES 111
Query: 443 LDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLR----PDHDACVSDFGLNPLFG 498
L + G+ +LH + KI H ++K NI+L P + DFGL
Sbjct: 112 LSEEEATSFIKQILDGVNYLH-TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170
Query: 499 NTTPPTRVAG---YRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAP 542
+ + G + APE+V + ++D++S GV+ LL+G +P
Sbjct: 171 DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 55/112 (49%), Gaps = 9/112 (8%)
Query: 447 NRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNP-------LFGN 499
N + + + G+ +L S VH ++ A N+LL H A +SDFGL+ +
Sbjct: 106 NIIELVHQVSMGMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 164
Query: 500 TTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEE 550
T + APE + K + KSDV+SFGVL+ E + G+ P + G E
Sbjct: 165 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 216
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 97/201 (48%), Gaps = 14/201 (6%)
Query: 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLK---EVAVGKREFEMQMEVLGKIKHDNVVP 405
E +G+G+ G YKA + G V +K+++ E ++ +L ++ H N+V
Sbjct: 7 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
L +++++ LV++++ L + S +G PL L +GLA H S
Sbjct: 67 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIKSYLFQL--LQGLAFCH-S 121
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLFG----NTTPPTRVAGYRAPEVVE-TRKV 520
+++H ++K N+L+ + ++DFGL FG T YRAPE++ +
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 181
Query: 521 TFKSDVYSFGVLLLELLTGKA 541
+ D++S G + E++T +A
Sbjct: 182 STAVDIWSLGCIFAEMVTRRA 202
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 21/200 (10%)
Query: 354 LGKGSVGTSYKAVLEEGTTVV-VKRLKEVAVGKREFEMQM----EVLGKIKHDNVVPLRA 408
LGKG G Y A ++ ++ +K L + + K E Q+ E+ ++H N++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 409 FYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKI 468
+++ + L+ ++ P G L L + GR D A L + H K+
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKEL---QKHGR--FDEQRSATFMEELADALHYCH-ERKV 135
Query: 469 VHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTR------VAGYRAPEVVETRKVTF 522
+H +IK N+L+ + ++DFG + P R Y PE++E +
Sbjct: 136 IHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDE 191
Query: 523 KSDVYSFGVLLLELLTGKAP 542
K D++ GVL E L G P
Sbjct: 192 KVDLWCAGVLCYEFLVGMPP 211
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 97/242 (40%), Gaps = 36/242 (14%)
Query: 342 DLEDLLRASAEV---LGKGSVGTSYKAVLE------EGTTVVVKRLKEVAVGKREFEMQM 392
DL+++ R + + LG G+ G Y+ + V VK L EV + E + M
Sbjct: 38 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 97
Query: 393 E--VLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTP--LDWDNR 448
E ++ K H N+V + ++ + M G L + L +R P L +
Sbjct: 98 EALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDL 157
Query: 449 MRIALSAARGLAHLHVSGKIVHGNIKASNILLR---PDHDACVSDFGLNPLFGNTTPPTR 505
+ +A A G +L +H +I A N LL P A + DFG+ R
Sbjct: 158 LHVARDIACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM------ARDIYR 210
Query: 506 VAGYR------------APEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGI 552
+ YR PE T K+D +SFGVLL E+ + G P + +E +
Sbjct: 211 ASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 270
Query: 553 DL 554
+
Sbjct: 271 EF 272
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 97/201 (48%), Gaps = 14/201 (6%)
Query: 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLK---EVAVGKREFEMQMEVLGKIKHDNVVP 405
E +G+G+ G YKA + G V +K+++ E ++ +L ++ H N+V
Sbjct: 6 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 65
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
L +++++ LV++++ L + S +G PL L +GLA H S
Sbjct: 66 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIKSYLFQL--LQGLAFCH-S 120
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLFG----NTTPPTRVAGYRAPEVVE-TRKV 520
+++H ++K N+L+ + ++DFGL FG T YRAPE++ +
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 521 TFKSDVYSFGVLLLELLTGKA 541
+ D++S G + E++T +A
Sbjct: 181 STAVDIWSLGCIFAEMVTRRA 201
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 97/239 (40%), Gaps = 30/239 (12%)
Query: 342 DLEDLLRASAEV---LGKGSVGTSYKAVLE------EGTTVVVKRLKEVAVGKREFEMQM 392
DL+++ R + + LG G+ G Y+ + V VK L EV + E + M
Sbjct: 23 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 82
Query: 393 E--VLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTP--LDWDNR 448
E ++ K H N+V + ++ + M G L + L +R P L +
Sbjct: 83 EALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDL 142
Query: 449 MRIALSAARGLAHLHVSGKIVHGNIKASNILLR---PDHDACVSDFGLNPLF-------- 497
+ +A A G +L +H +I A N LL P A + DFG+
Sbjct: 143 LHVARDIACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 201
Query: 498 -GNTTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDL 554
G P + + PE T K+D +SFGVLL E+ + G P + +E ++
Sbjct: 202 GGCAMLPVK---WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEF 257
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 97/201 (48%), Gaps = 14/201 (6%)
Query: 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLK---EVAVGKREFEMQMEVLGKIKHDNVVP 405
E +G+G+ G YKA + G V +K+++ E ++ +L ++ H N+V
Sbjct: 7 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
L +++++ LV++++ L + S +G PL L +GLA H S
Sbjct: 67 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIKSYLFQL--LQGLAFCH-S 121
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLFG----NTTPPTRVAGYRAPEV-VETRKV 520
+++H ++K N+L+ + ++DFGL FG T YRAPE+ + +
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 181
Query: 521 TFKSDVYSFGVLLLELLTGKA 541
+ D++S G + E++T +A
Sbjct: 182 STAVDIWSLGCIFAEMVTRRA 202
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 97/239 (40%), Gaps = 30/239 (12%)
Query: 342 DLEDLLRASAEV---LGKGSVGTSYKAVLE------EGTTVVVKRLKEVAVGKREFEMQM 392
DL+++ R + + LG G+ G Y+ + V VK L EV + E + M
Sbjct: 23 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 82
Query: 393 E--VLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTP--LDWDNR 448
E ++ K H N+V + ++ + M G L + L +R P L +
Sbjct: 83 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 142
Query: 449 MRIALSAARGLAHLHVSGKIVHGNIKASNILLR---PDHDACVSDFGLNPLF-------- 497
+ +A A G +L +H +I A N LL P A + DFG+
Sbjct: 143 LHVARDIACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 201
Query: 498 -GNTTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDL 554
G P + + PE T K+D +SFGVLL E+ + G P + +E ++
Sbjct: 202 GGCAMLPVK---WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEF 257
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 55/112 (49%), Gaps = 9/112 (8%)
Query: 447 NRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNP-------LFGN 499
N + + + G+ +L S VH ++ A N+LL H A +SDFGL+ +
Sbjct: 118 NIIELVHQVSMGMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 176
Query: 500 TTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEE 550
T + APE + K + KSDV+SFGVL+ E + G+ P + G E
Sbjct: 177 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 228
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 55/112 (49%), Gaps = 9/112 (8%)
Query: 447 NRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNP-------LFGN 499
N + + + G+ +L S VH ++ A N+LL H A +SDFGL+ +
Sbjct: 112 NIIELVHQVSMGMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 170
Query: 500 TTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEE 550
T + APE + K + KSDV+SFGVL+ E + G+ P + G E
Sbjct: 171 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 222
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 65/142 (45%), Gaps = 14/142 (9%)
Query: 417 LLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKAS 476
+LV + G L+ L +R N + + + G+ +L S VH ++ A
Sbjct: 103 MLVMEMAELGPLNKYLQQNRHVKDK-----NIIELVHQVSMGMKYLEESN-FVHRDLAAR 156
Query: 477 NILLRPDHDACVSDFGLNP-------LFGNTTPPTRVAGYRAPEVVETRKVTFKSDVYSF 529
N+LL H A +SDFGL+ + T + APE + K + KSDV+SF
Sbjct: 157 NVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSF 216
Query: 530 GVLLLELLT-GKAPNQASLGEE 550
GVL+ E + G+ P + G E
Sbjct: 217 GVLMWEAFSYGQKPYRGMKGSE 238
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 65/142 (45%), Gaps = 14/142 (9%)
Query: 417 LLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKAS 476
+LV + G L+ L +R N + + + G+ +L S VH ++ A
Sbjct: 103 MLVMEMAELGPLNKYLQQNRHVKDK-----NIIELVHQVSMGMKYLEESN-FVHRDLAAR 156
Query: 477 NILLRPDHDACVSDFGLNP-------LFGNTTPPTRVAGYRAPEVVETRKVTFKSDVYSF 529
N+LL H A +SDFGL+ + T + APE + K + KSDV+SF
Sbjct: 157 NVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSF 216
Query: 530 GVLLLELLT-GKAPNQASLGEE 550
GVL+ E + G+ P + G E
Sbjct: 217 GVLMWEAFSYGQKPYRGMKGSE 238
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 82/186 (44%), Gaps = 25/186 (13%)
Query: 391 QMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSL-SALLHGSRGSGRTPLDWDNRM 449
++ VL ++ H N++ L F+ K LV + G L ++ + S +D M
Sbjct: 54 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFS---EVDAAVIM 110
Query: 450 RIALSAARGLAHLHVSGKIVHGNIKASNILLR-PDHDACVS--DFGLNPLF---GNTTPP 503
+ LS G +LH IVH ++K N+LL DA + DFGL+ F G
Sbjct: 111 KQVLS---GTTYLH-KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKER 166
Query: 504 TRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAP----------NQASLGEEGID 553
A Y APEV+ +K K DV+S GV+L LL G P + G+ D
Sbjct: 167 LGTAYYIAPEVLR-KKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFD 225
Query: 554 LPRWVQ 559
P W Q
Sbjct: 226 PPDWTQ 231
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 90/201 (44%), Gaps = 18/201 (8%)
Query: 353 VLGKGSVGTSYKA-VLEEGTTVVVKRLKEVAVGK----REFEMQMEVLGKIKHDNVVPLR 407
+LGKGS Y+A + G V +K + + A+ K + + ++++ ++KH +++ L
Sbjct: 18 LLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELY 77
Query: 408 AFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGK 467
++ + LV + G ++ L + P + G+ +LH G
Sbjct: 78 NYFEDSNYVYLVLEMCHNGEMNRYL----KNRVKPFSENEARHFMHQIITGMLYLHSHG- 132
Query: 468 IVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTR------VAGYRAPEVVETRKVT 521
I+H ++ SN+LL + + ++DFGL P + Y +PE+
Sbjct: 133 ILHRDLTLSNLLLTRNMNIKIADFGLATQL--KMPHEKHYTLCGTPNYISPEIATRSAHG 190
Query: 522 FKSDVYSFGVLLLELLTGKAP 542
+SDV+S G + LL G+ P
Sbjct: 191 LESDVWSLGCMFYTLLIGRPP 211
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 97/239 (40%), Gaps = 30/239 (12%)
Query: 342 DLEDLLRASAEV---LGKGSVGTSYKAVLE------EGTTVVVKRLKEVAVGKREFEMQM 392
DL+++ R + + LG G+ G Y+ + V VK L EV + E + M
Sbjct: 15 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 74
Query: 393 E--VLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTP--LDWDNR 448
E ++ K H N+V + ++ + M G L + L +R P L +
Sbjct: 75 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 134
Query: 449 MRIALSAARGLAHLHVSGKIVHGNIKASNILLR---PDHDACVSDFGLNPLF-------- 497
+ +A A G +L +H +I A N LL P A + DFG+
Sbjct: 135 LHVARDIACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 193
Query: 498 -GNTTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDL 554
G P + + PE T K+D +SFGVLL E+ + G P + +E ++
Sbjct: 194 GGCAMLPVK---WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEF 249
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 24/201 (11%)
Query: 354 LGKGSVGTSYKAVL-EEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVVPLRA 408
+G G+ G AV G V +K+L + KR + ++ +L ++H+NV+ L
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYR-ELRLLKHMRHENVIGLLD 91
Query: 409 FYYSKDEKL-------LVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
+ + DE L LV +M + H G R + +GL +
Sbjct: 92 VF-TPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQF-------LVYQMLKGLRY 143
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVA-GYRAPEVV-ETRK 519
+H +G I+H ++K N+ + D + + DFGL + V YRAPEV+ +
Sbjct: 144 IHAAG-IIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTRWYRAPEVILNWMR 202
Query: 520 VTFKSDVYSFGVLLLELLTGK 540
T D++S G ++ E++TGK
Sbjct: 203 YTQTVDIWSVGCIMAEMITGK 223
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 78/177 (44%), Gaps = 24/177 (13%)
Query: 385 KREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLD 444
+ + M++ + + H +VV F+ D +V + SL L H R + P
Sbjct: 61 REKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEA 119
Query: 445 WDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL----------- 493
+I L G +LH +++H ++K N+ L D + + DFGL
Sbjct: 120 RYYLRQIVL----GCQYLH-RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK 174
Query: 494 NPLFGNTTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEE 550
L G TP Y APEV+ + +F+ DV+S G ++ LL GK P + S +E
Sbjct: 175 KTLCG--TP-----NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE 224
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 55/112 (49%), Gaps = 9/112 (8%)
Query: 447 NRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNP-------LFGN 499
N + + + G+ +L S VH ++ A N+LL H A +SDFGL+ +
Sbjct: 126 NIIELVHQVSMGMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 184
Query: 500 TTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEE 550
T + APE + K + KSDV+SFGVL+ E + G+ P + G E
Sbjct: 185 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 236
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 55/112 (49%), Gaps = 9/112 (8%)
Query: 447 NRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNP-------LFGN 499
N + + + G+ +L S VH ++ A N+LL H A +SDFGL+ +
Sbjct: 112 NIIELVHQVSMGMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKA 170
Query: 500 TTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEE 550
T + APE + K + KSDV+SFGVL+ E + G+ P + G E
Sbjct: 171 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 222
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 89/199 (44%), Gaps = 25/199 (12%)
Query: 355 GKGSVGTSYKAVLEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVVPLRAFY 410
+G V +Y AVL+ V +K+L + KR + ++ ++ + H N++ L +
Sbjct: 74 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVF 130
Query: 411 YSK------DEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
+ + LV + M A + + LD + + G+ HLH
Sbjct: 131 TPQKTLEEFQDVYLVMELMDANLCQVI--------QMELDHERMSYLLYQMLCGIKHLHS 182
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT---TPPTRVAGYRAPEVVETRKVT 521
+G I+H ++K SNI+++ D + DFGL G + TP YRAPEV+
Sbjct: 183 AG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 241
Query: 522 FKSDVYSFGVLLLELLTGK 540
D++S G ++ E++ K
Sbjct: 242 ENVDIWSVGCIMGEMVRHK 260
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 80/175 (45%), Gaps = 30/175 (17%)
Query: 452 ALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL------NPLF---GNTTP 502
+ A+G+ L S K +H ++ A NILL + + DFGL +P + G+
Sbjct: 206 SFQVAKGMEFL-ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 264
Query: 503 PTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSV 561
P + + APE + R T +SDV+SFGVLL E+ + G +P G+
Sbjct: 265 PLK---WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP------GVK-------- 307
Query: 562 VREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
+ EE+ + + MR + ++ Q + C P QRP E+V + N+
Sbjct: 308 IDEEFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNL 360
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 80/175 (45%), Gaps = 30/175 (17%)
Query: 452 ALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL------NPLF---GNTTP 502
+ A+G+ L S K +H ++ A NILL + + DFGL +P + G+
Sbjct: 197 SFQVAKGMEFL-ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 255
Query: 503 PTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSV 561
P + + APE + R T +SDV+SFGVLL E+ + G +P G+
Sbjct: 256 PLK---WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP------GVK-------- 298
Query: 562 VREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
+ EE+ + + MR + ++ Q + C P QRP E+V + N+
Sbjct: 299 IDEEFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNL 351
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 89/199 (44%), Gaps = 25/199 (12%)
Query: 355 GKGSVGTSYKAVLEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVVPLRAFY 410
+G V +Y AVL+ V +K+L + KR + ++ ++ + H N++ L +
Sbjct: 37 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVF 93
Query: 411 YSK------DEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
+ + LV + M A + + LD + + G+ HLH
Sbjct: 94 TPQKTLEEFQDVYLVMELMDANLCQVI--------QMELDHERMSYLLYQMLCGIKHLHS 145
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT---TPPTRVAGYRAPEVVETRKVT 521
+G I+H ++K SNI+++ D + DFGL G + TP YRAPEV+
Sbjct: 146 AG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 204
Query: 522 FKSDVYSFGVLLLELLTGK 540
D++S G ++ E++ K
Sbjct: 205 ENVDIWSVGCIMGEMVRHK 223
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 80/175 (45%), Gaps = 30/175 (17%)
Query: 452 ALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL------NPLF---GNTTP 502
+ A+G+ L S K +H ++ A NILL + + DFGL +P + G+
Sbjct: 199 SFQVAKGMEFL-ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 257
Query: 503 PTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSV 561
P + + APE + R T +SDV+SFGVLL E+ + G +P G+
Sbjct: 258 PLK---WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP------GVK-------- 300
Query: 562 VREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
+ EE+ + + MR + ++ Q + C P QRP E+V + N+
Sbjct: 301 IDEEFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNL 353
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 89/199 (44%), Gaps = 25/199 (12%)
Query: 355 GKGSVGTSYKAVLEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVVPLRAFY 410
+G V +Y AVL+ V +K+L + KR + ++ ++ + H N++ L +
Sbjct: 30 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVF 86
Query: 411 YSK------DEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
+ + LV + M A + + LD + + G+ HLH
Sbjct: 87 TPQKTLEEFQDVYLVMELMDANLCQVI--------QMELDHERMSYLLYQMLCGIKHLHS 138
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT---TPPTRVAGYRAPEVVETRKVT 521
+G I+H ++K SNI+++ D + DFGL G + TP YRAPEV+
Sbjct: 139 AG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 197
Query: 522 FKSDVYSFGVLLLELLTGK 540
D++S G ++ E++ K
Sbjct: 198 ENVDIWSVGCIMGEMVRHK 216
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 78/177 (44%), Gaps = 24/177 (13%)
Query: 385 KREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLD 444
+ + M++ + + H +VV F+ D +V + SL L H R + P
Sbjct: 61 REKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEA 119
Query: 445 WDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL----------- 493
+I L G +LH +++H ++K N+ L D + + DFGL
Sbjct: 120 RYYLRQIVL----GCQYLH-RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK 174
Query: 494 NPLFGNTTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEE 550
L G TP Y APEV+ + +F+ DV+S G ++ LL GK P + S +E
Sbjct: 175 KTLCG--TP-----NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE 224
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 78/177 (44%), Gaps = 24/177 (13%)
Query: 385 KREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLD 444
+ + M++ + + H +VV F+ D +V + SL L H R + P
Sbjct: 65 REKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEA 123
Query: 445 WDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL----------- 493
+I L G +LH +++H ++K N+ L D + + DFGL
Sbjct: 124 RYYLRQIVL----GCQYLH-RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK 178
Query: 494 NPLFGNTTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEE 550
L G TP Y APEV+ + +F+ DV+S G ++ LL GK P + S +E
Sbjct: 179 KTLCG--TP-----NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE 228
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 89/199 (44%), Gaps = 25/199 (12%)
Query: 355 GKGSVGTSYKAVLEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVVPLRAFY 410
+G V +Y AVL+ V +K+L + KR + ++ ++ + H N++ L +
Sbjct: 36 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVF 92
Query: 411 YSK------DEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
+ + LV + M A + + LD + + G+ HLH
Sbjct: 93 TPQKTLEEFQDVYLVMELMDANLCQVI--------QMELDHERMSYLLYQMLCGIKHLHS 144
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT---TPPTRVAGYRAPEVVETRKVT 521
+G I+H ++K SNI+++ D + DFGL G + TP YRAPEV+
Sbjct: 145 AG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 203
Query: 522 FKSDVYSFGVLLLELLTGK 540
D++S G ++ E++ K
Sbjct: 204 ENVDIWSVGCIMGEMVRHK 222
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 89/199 (44%), Gaps = 25/199 (12%)
Query: 355 GKGSVGTSYKAVLEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVVPLRAFY 410
+G V +Y AVL+ V +K+L + KR + ++ ++ + H N++ L +
Sbjct: 30 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVF 86
Query: 411 YSK------DEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
+ + LV + M A + + LD + + G+ HLH
Sbjct: 87 TPQKTLEEFQDVYLVMELMDANLCQVI--------QMELDHERMSYLLYQMLCGIKHLHS 138
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT---TPPTRVAGYRAPEVVETRKVT 521
+G I+H ++K SNI+++ D + DFGL G + TP YRAPEV+
Sbjct: 139 AG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 197
Query: 522 FKSDVYSFGVLLLELLTGK 540
D++S G ++ E++ K
Sbjct: 198 ENVDIWSVGCIMGEMVRHK 216
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 80/175 (45%), Gaps = 30/175 (17%)
Query: 452 ALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL------NPLF---GNTTP 502
+ A+G+ L S K +H ++ A NILL + + DFGL +P + G+
Sbjct: 204 SFQVAKGMEFL-ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 262
Query: 503 PTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSV 561
P + + APE + R T +SDV+SFGVLL E+ + G +P G+
Sbjct: 263 PLK---WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP------GVK-------- 305
Query: 562 VREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
+ EE+ + + MR + ++ Q + C P QRP E+V + N+
Sbjct: 306 IDEEFCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNL 358
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 89/199 (44%), Gaps = 25/199 (12%)
Query: 355 GKGSVGTSYKAVLEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVVPLRAFY 410
+G V +Y AVL+ V +K+L + KR + ++ ++ + H N++ L +
Sbjct: 37 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVF 93
Query: 411 YSK------DEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
+ + LV + M A + + LD + + G+ HLH
Sbjct: 94 TPQKTLEEFQDVYLVMELMDANLCQVI--------QMELDHERMSYLLYQMLCGIKHLHS 145
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT---TPPTRVAGYRAPEVVETRKVT 521
+G I+H ++K SNI+++ D + DFGL G + TP YRAPEV+
Sbjct: 146 AG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 204
Query: 522 FKSDVYSFGVLLLELLTGK 540
D++S G ++ E++ K
Sbjct: 205 ENVDIWSVGCIMGEMVRHK 223
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 89/199 (44%), Gaps = 25/199 (12%)
Query: 355 GKGSVGTSYKAVLEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVVPLRAFY 410
+G V +Y AVL+ V +K+L + KR + ++ ++ + H N++ L +
Sbjct: 29 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVF 85
Query: 411 YSK------DEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
+ + LV + M A + + LD + + G+ HLH
Sbjct: 86 TPQKTLEEFQDVYLVMELMDANLCQVI--------QMELDHERMSYLLYQMLCGIKHLHS 137
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT---TPPTRVAGYRAPEVVETRKVT 521
+G I+H ++K SNI+++ D + DFGL G + TP YRAPEV+
Sbjct: 138 AG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 196
Query: 522 FKSDVYSFGVLLLELLTGK 540
D++S G ++ E++ K
Sbjct: 197 ENVDIWSVGCIMGEMVRHK 215
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 89/199 (44%), Gaps = 25/199 (12%)
Query: 355 GKGSVGTSYKAVLEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVVPLRAFY 410
+G V +Y AVL+ V +K+L + KR + ++ ++ + H N++ L +
Sbjct: 35 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVF 91
Query: 411 YSK------DEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
+ + LV + M A + + LD + + G+ HLH
Sbjct: 92 TPQKTLEEFQDVYLVMELMDANLCQVI--------QMELDHERMSYLLYQMLCGIKHLHS 143
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT---TPPTRVAGYRAPEVVETRKVT 521
+G I+H ++K SNI+++ D + DFGL G + TP YRAPEV+
Sbjct: 144 AG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 202
Query: 522 FKSDVYSFGVLLLELLTGK 540
D++S G ++ E++ K
Sbjct: 203 ENVDIWSVGCIMGEMVRHK 221
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 89/199 (44%), Gaps = 25/199 (12%)
Query: 355 GKGSVGTSYKAVLEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVVPLRAFY 410
+G V +Y AVL+ V +K+L + KR + ++ ++ + H N++ L +
Sbjct: 36 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVF 92
Query: 411 YSK------DEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
+ + LV + M A + + LD + + G+ HLH
Sbjct: 93 TPQKTLEEFQDVYLVMELMDANLCQVI--------QMELDHERMSYLLYQMLCGIKHLHS 144
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT---TPPTRVAGYRAPEVVETRKVT 521
+G I+H ++K SNI+++ D + DFGL G + TP YRAPEV+
Sbjct: 145 AG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 203
Query: 522 FKSDVYSFGVLLLELLTGK 540
D++S G ++ E++ K
Sbjct: 204 ENVDIWSVGCIMGEMVRHK 222
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 99/204 (48%), Gaps = 20/204 (9%)
Query: 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLK---EVAVGKREFEMQMEVLGKIKHDNVVP 405
E +G+G+ G YKA + G V +K+++ E ++ +L ++ H N+V
Sbjct: 8 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 67
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
L +++++ LV++++ + L + S +G PL L +GLA H S
Sbjct: 68 LLDVIHTENKLYLVFEFL-SMDLKKFMDASALTG-IPLPLIKSYLFQL--LQGLAFCH-S 122
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVA-------GYRAPEV-VET 517
+++H ++K N+L+ + ++DFGL FG P R YRAPE+ +
Sbjct: 123 HRVLHRDLKPENLLINTEGAIKLADFGLARAFGV---PVRTYXHEVVTLWYRAPEILLGC 179
Query: 518 RKVTFKSDVYSFGVLLLELLTGKA 541
+ + D++S G + E++T +A
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 99/204 (48%), Gaps = 20/204 (9%)
Query: 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLK---EVAVGKREFEMQMEVLGKIKHDNVVP 405
E +G+G+ G YKA + G V +K+++ E ++ +L ++ H N+V
Sbjct: 10 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 69
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
L +++++ LV++++ + L + S +G PL L +GLA H S
Sbjct: 70 LLDVIHTENKLYLVFEFL-SMDLKKFMDASALTG-IPLPLIKSYLFQL--LQGLAFCH-S 124
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVA-------GYRAPEV-VET 517
+++H ++K N+L+ + ++DFGL FG P R YRAPE+ +
Sbjct: 125 HRVLHRDLKPENLLINTEGAIKLADFGLARAFGV---PVRTYXHEVVTLWYRAPEILLGC 181
Query: 518 RKVTFKSDVYSFGVLLLELLTGKA 541
+ + D++S G + E++T +A
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 96/223 (43%), Gaps = 40/223 (17%)
Query: 352 EVLGKGSVGTSYKAVL------EEGTTVVVKRLKEVAVG--KREFEMQMEVLGKI-KHDN 402
+ LG G+ G +A + V VK LK A K +++++ + +H+N
Sbjct: 37 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 96
Query: 403 VVPLRAFYYSKDEKLLVYDYMPAGSL--------SALLHGSRGSGRTP----------LD 444
+V L L++ +Y G L A+L S G+ P L+
Sbjct: 97 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLE 156
Query: 445 WDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNP--------- 495
+ + + A+G+A L S +H ++ A N+LL H A + DFGL
Sbjct: 157 LRDLLHFSSQVAQGMAFL-ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 215
Query: 496 LFGNTTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT 538
+ GN P + + APE + T +SDV+S+G+LL E+ +
Sbjct: 216 VKGNARLPVK---WMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 70/158 (44%), Gaps = 13/158 (8%)
Query: 391 QMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMR 450
++ +L + H N++ L + K LV ++ G L + R D +
Sbjct: 96 EISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQI-----INRHKFDECDAAN 150
Query: 451 IALSAARGLAHLHVSGKIVHGNIKASNILLRPDH---DACVSDFGLNPLFGNTTPPTRVA 507
I G+ +LH IVH +IK NILL + + + DFGL+ F
Sbjct: 151 IMKQILSGICYLH-KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRL 209
Query: 508 G---YRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAP 542
G Y APEV++ +K K DV+S GV++ LL G P
Sbjct: 210 GTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPP 246
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 97/201 (48%), Gaps = 14/201 (6%)
Query: 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLK---EVAVGKREFEMQMEVLGKIKHDNVVP 405
E +G+G+ G YKA + G V +K+++ E ++ +L ++ H N+V
Sbjct: 6 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 65
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
L +++++ LV++++ L + S +G PL L +GLA H S
Sbjct: 66 LLDVIHTENKLYLVFEHV-HQDLKTFMDASALTG-IPLPLIKSYLFQL--LQGLAFCH-S 120
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLFG----NTTPPTRVAGYRAPEV-VETRKV 520
+++H ++K N+L+ + ++DFGL FG T YRAPE+ + +
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 521 TFKSDVYSFGVLLLELLTGKA 541
+ D++S G + E++T +A
Sbjct: 181 STAVDIWSLGCIFAEMVTRRA 201
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 97/242 (40%), Gaps = 36/242 (14%)
Query: 342 DLEDLLRASAEV---LGKGSVGTSYKAVLE------EGTTVVVKRLKEVAVGKREFEMQM 392
DL+++ R + + LG G+ G Y+ + V VK L EV + E + M
Sbjct: 38 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLM 97
Query: 393 E--VLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTP--LDWDNR 448
E ++ K H N+V + ++ + M G L + L +R P L +
Sbjct: 98 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 157
Query: 449 MRIALSAARGLAHLHVSGKIVHGNIKASNILLR---PDHDACVSDFGLNPLFGNTTPPTR 505
+ +A A G +L +H +I A N LL P A + DFG+ R
Sbjct: 158 LHVARDIACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM------ARDIYR 210
Query: 506 VAGYR------------APEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGI 552
+ YR PE T K+D +SFGVLL E+ + G P + +E +
Sbjct: 211 ASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 270
Query: 553 DL 554
+
Sbjct: 271 EF 272
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 99/204 (48%), Gaps = 20/204 (9%)
Query: 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLK---EVAVGKREFEMQMEVLGKIKHDNVVP 405
E +G+G+ G YKA + G V +K+++ E ++ +L ++ H N+V
Sbjct: 9 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 68
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
L +++++ LV++++ + L + S +G PL L +GLA H S
Sbjct: 69 LLDVIHTENKLYLVFEFL-SMDLKDFMDASALTG-IPLPLIKSYLFQL--LQGLAFCH-S 123
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVA-------GYRAPEV-VET 517
+++H ++K N+L+ + ++DFGL FG P R YRAPE+ +
Sbjct: 124 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV---PVRTYXHEVVTLWYRAPEILLGC 180
Query: 518 RKVTFKSDVYSFGVLLLELLTGKA 541
+ + D++S G + E++T +A
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRRA 204
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 88/198 (44%), Gaps = 25/198 (12%)
Query: 355 GKGSVGTSYKAVLEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVVPLRAFY 410
+G V +Y A+LE V +K+L + KR + ++ ++ + H N++ L +
Sbjct: 38 AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVF 94
Query: 411 YSK------DEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
+ + +V + M A + + LD + + G+ HLH
Sbjct: 95 TPQKSLEEFQDVYIVMELMDANLCQVI--------QMELDHERMSYLLYQMLCGIKHLHS 146
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT---TPPTRVAGYRAPEVVETRKVT 521
+G I+H ++K SNI+++ D + DFGL G + P YRAPEV+
Sbjct: 147 AG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRYYRAPEVILGMGYK 205
Query: 522 FKSDVYSFGVLLLELLTG 539
D++S G ++ E++ G
Sbjct: 206 ENVDIWSVGCIMGEMIKG 223
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 99/223 (44%), Gaps = 25/223 (11%)
Query: 353 VLGKGSVGTSYKAVLE----EGTTVVVKRLKEVAV--GKREFEMQMEVLGKIKHDNVVPL 406
+LG+G G Y+ V E V VK K+ K +F + ++ + H ++V L
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 407 RAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSG 466
++ ++ + P G L L ++ S + + +L + +A+L S
Sbjct: 79 IGII-EEEPTWIIMELYPYGELGHYLERNKNSLKVL----TLVLYSLQICKAMAYLE-SI 132
Query: 467 KIVHGNIKASNILLRPDHDACVSDFGLNPLFGN----TTPPTRV-AGYRAPEVVETRKVT 521
VH +I NIL+ + DFGL+ + TR+ + +PE + R+ T
Sbjct: 133 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFT 192
Query: 522 FKSDVYSFGVLLLELLT-GKAP-----NQASLG--EEGIDLPR 556
SDV+ F V + E+L+ GK P N+ +G E+G LP+
Sbjct: 193 TASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPK 235
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 98/204 (48%), Gaps = 20/204 (9%)
Query: 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLK---EVAVGKREFEMQMEVLGKIKHDNVVP 405
E +G+G+ G YKA + G V +K+++ E ++ +L ++ H N+V
Sbjct: 9 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 68
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
L +++++ LV++++ L + S +G PL L +GLA H S
Sbjct: 69 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIKSYLFQL--LQGLAFCH-S 123
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVA-------GYRAPEV-VET 517
+++H ++K N+L+ + ++DFGL FG P R YRAPE+ +
Sbjct: 124 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV---PVRTYXHEVVTLWYRAPEILLGC 180
Query: 518 RKVTFKSDVYSFGVLLLELLTGKA 541
+ + D++S G + E++T +A
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRRA 204
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 403 VVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHL 462
V+ L Y + E +L+ +Y G + +L + ++ +R+ G+ +L
Sbjct: 91 VINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSE---NDVIRLIKQILEGVYYL 147
Query: 463 HVSGKIVHGNIKASNILLR---PDHDACVSDFGLNPLFGNTTPPTRVAG---YRAPEVVE 516
H IVH ++K NILL P D + DFG++ G+ + G Y APE++
Sbjct: 148 H-QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILN 206
Query: 517 TRKVTFKSDVYSFGVLLLELLTGKAP 542
+T +D+++ G++ LLT +P
Sbjct: 207 YDPITTATDMWNIGIIAYMLLTHTSP 232
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 99/223 (44%), Gaps = 25/223 (11%)
Query: 353 VLGKGSVGTSYKAVLE----EGTTVVVKRLKEVAV--GKREFEMQMEVLGKIKHDNVVPL 406
+LG+G G Y+ V E V VK K+ K +F + ++ + H ++V L
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 407 RAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSG 466
++ ++ + P G L L ++ S + + +L + +A+L S
Sbjct: 75 IGII-EEEPTWIIMELYPYGELGHYLERNKNSLKVL----TLVLYSLQICKAMAYLE-SI 128
Query: 467 KIVHGNIKASNILLRPDHDACVSDFGLNPLFGN----TTPPTRV-AGYRAPEVVETRKVT 521
VH +I NIL+ + DFGL+ + TR+ + +PE + R+ T
Sbjct: 129 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFT 188
Query: 522 FKSDVYSFGVLLLELLT-GKAP-----NQASLG--EEGIDLPR 556
SDV+ F V + E+L+ GK P N+ +G E+G LP+
Sbjct: 189 TASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPK 231
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 98/204 (48%), Gaps = 20/204 (9%)
Query: 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLK---EVAVGKREFEMQMEVLGKIKHDNVVP 405
E +G+G+ G YKA + G V +K+++ E ++ +L ++ H N+V
Sbjct: 10 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 69
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
L +++++ LV++++ L + S +G PL L +GLA H S
Sbjct: 70 LLDVIHTENKLYLVFEFL-HQDLKTFMDASALTG-IPLPLIKSYLFQL--LQGLAFCH-S 124
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVA-------GYRAPEV-VET 517
+++H ++K N+L+ + ++DFGL FG P R YRAPE+ +
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV---PVRTYXHEVVTLWYRAPEILLGC 181
Query: 518 RKVTFKSDVYSFGVLLLELLTGKA 541
+ + D++S G + E++T +A
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 98/204 (48%), Gaps = 20/204 (9%)
Query: 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLK---EVAVGKREFEMQMEVLGKIKHDNVVP 405
E +G+G+ G YKA + G V +K+++ E ++ +L ++ H N+V
Sbjct: 6 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 65
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
L +++++ LV++++ L + S +G PL L +GLA H S
Sbjct: 66 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIKSYLFQL--LQGLAFCH-S 120
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVA-------GYRAPEV-VET 517
+++H ++K N+L+ + ++DFGL FG P R YRAPE+ +
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV---PVRTYXHEVVTLWYRAPEILLGC 177
Query: 518 RKVTFKSDVYSFGVLLLELLTGKA 541
+ + D++S G + E++T +A
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 89/199 (44%), Gaps = 25/199 (12%)
Query: 355 GKGSVGTSYKAVLEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVVPLRAFY 410
+G V +Y A+LE V +K+L + KR + ++ ++ + H N++ L +
Sbjct: 30 AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVF 86
Query: 411 YSK------DEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
+ + +V + M A + + LD + + G+ HLH
Sbjct: 87 TPQKSLEEFQDVYIVMELMDANLCQVI--------QMELDHERMSYLLYQMLCGIKHLHS 138
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT---TPPTRVAGYRAPEVVETRKVT 521
+G I+H ++K SNI+++ D + DFGL G + TP YRAPEV+
Sbjct: 139 AG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 197
Query: 522 FKSDVYSFGVLLLELLTGK 540
D++S G ++ E++ K
Sbjct: 198 ENVDLWSVGCIMGEMVCHK 216
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 82/186 (44%), Gaps = 25/186 (13%)
Query: 391 QMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSL-SALLHGSRGSGRTPLDWDNRM 449
++ VL ++ H N++ L F+ K LV + G L ++ + S +D M
Sbjct: 71 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFS---EVDAAVIM 127
Query: 450 RIALSAARGLAHLHVSGKIVHGNIKASNILLR-PDHDACVS--DFGLNPLF---GNTTPP 503
+ LS G +LH IVH ++K N+LL DA + DFGL+ F G
Sbjct: 128 KQVLS---GTTYLH-KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKER 183
Query: 504 TRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAP----------NQASLGEEGID 553
A Y APEV+ +K K DV+S GV+L LL G P + G+ D
Sbjct: 184 LGTAYYIAPEVLR-KKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFD 242
Query: 554 LPRWVQ 559
P W Q
Sbjct: 243 PPDWTQ 248
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 98/204 (48%), Gaps = 20/204 (9%)
Query: 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLK---EVAVGKREFEMQMEVLGKIKHDNVVP 405
E +G+G+ G YKA + G V +K+++ E ++ +L ++ H N+V
Sbjct: 10 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 69
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
L +++++ LV++++ L + S +G PL L +GLA H S
Sbjct: 70 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIKSYLFQL--LQGLAFCH-S 124
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVA-------GYRAPEV-VET 517
+++H ++K N+L+ + ++DFGL FG P R YRAPE+ +
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV---PVRTYXHEVVTLWYRAPEILLGC 181
Query: 518 RKVTFKSDVYSFGVLLLELLTGKA 541
+ + D++S G + E++T +A
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 98/204 (48%), Gaps = 20/204 (9%)
Query: 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLK---EVAVGKREFEMQMEVLGKIKHDNVVP 405
E +G+G+ G YKA + G V +K+++ E ++ +L ++ H N+V
Sbjct: 9 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 68
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
L +++++ LV++++ L + S +G PL L +GLA H S
Sbjct: 69 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIKSYLFQL--LQGLAFCH-S 123
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVA-------GYRAPEV-VET 517
+++H ++K N+L+ + ++DFGL FG P R YRAPE+ +
Sbjct: 124 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV---PVRTYXHEVVTLWYRAPEILLGC 180
Query: 518 RKVTFKSDVYSFGVLLLELLTGKA 541
+ + D++S G + E++T +A
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRRA 204
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 99/204 (48%), Gaps = 20/204 (9%)
Query: 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLK---EVAVGKREFEMQMEVLGKIKHDNVVP 405
E +G+G+ G YKA + G V +K+++ E ++ +L ++ H N+V
Sbjct: 10 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 69
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
L +++++ LV++++ + L + S +G PL L +GLA H S
Sbjct: 70 LLDVIHTENKLYLVFEFL-SMDLKDFMDASALTG-IPLPLIKSYLFQL--LQGLAFCH-S 124
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTR-------VAGYRAPEV-VET 517
+++H ++K N+L+ + ++DFGL FG P R YRAPE+ +
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV---PVRTYXHEVVTLWYRAPEILLGC 181
Query: 518 RKVTFKSDVYSFGVLLLELLTGKA 541
+ + D++S G + E++T +A
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 99/223 (44%), Gaps = 25/223 (11%)
Query: 353 VLGKGSVGTSYKAVLE----EGTTVVVKRLKEVAV--GKREFEMQMEVLGKIKHDNVVPL 406
+LG+G G Y+ V E V VK K+ K +F + ++ + H ++V L
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 90
Query: 407 RAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSG 466
++ ++ + P G L L ++ S + + +L + +A+L S
Sbjct: 91 IGII-EEEPTWIIMELYPYGELGHYLERNKNSLKVL----TLVLYSLQICKAMAYLE-SI 144
Query: 467 KIVHGNIKASNILLRPDHDACVSDFGLNPLFGN----TTPPTRV-AGYRAPEVVETRKVT 521
VH +I NIL+ + DFGL+ + TR+ + +PE + R+ T
Sbjct: 145 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFT 204
Query: 522 FKSDVYSFGVLLLELLT-GKAP-----NQASLG--EEGIDLPR 556
SDV+ F V + E+L+ GK P N+ +G E+G LP+
Sbjct: 205 TASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPK 247
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 89/199 (44%), Gaps = 25/199 (12%)
Query: 355 GKGSVGTSYKAVLEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVVPLRAFY 410
+G V +Y A+LE V +K+L + KR + ++ ++ + H N++ L +
Sbjct: 41 AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVF 97
Query: 411 YSK------DEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
+ + +V + M A + + LD + + G+ HLH
Sbjct: 98 TPQKSLEEFQDVYIVMELMDANLCQVI--------QMELDHERMSYLLYQMLCGIKHLHS 149
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT---TPPTRVAGYRAPEVVETRKVT 521
+G I+H ++K SNI+++ D + DFGL G + TP YRAPEV+
Sbjct: 150 AG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 208
Query: 522 FKSDVYSFGVLLLELLTGK 540
D++S G ++ E++ K
Sbjct: 209 ENVDLWSVGCIMGEMVCHK 227
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 98/204 (48%), Gaps = 20/204 (9%)
Query: 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLK---EVAVGKREFEMQMEVLGKIKHDNVVP 405
E +G+G+ G YKA + G V +K+++ E ++ +L ++ H N+V
Sbjct: 7 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
L +++++ LV++++ L + S +G PL L +GLA H S
Sbjct: 67 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIKSYLFQL--LQGLAFCH-S 121
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVA-------GYRAPEV-VET 517
+++H ++K N+L+ + ++DFGL FG P R YRAPE+ +
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV---PVRTYXHEVVTLWYRAPEILLGC 178
Query: 518 RKVTFKSDVYSFGVLLLELLTGKA 541
+ + D++S G + E++T +A
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 98/204 (48%), Gaps = 20/204 (9%)
Query: 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLK---EVAVGKREFEMQMEVLGKIKHDNVVP 405
E +G+G+ G YKA + G V +K+++ E ++ +L ++ H N+V
Sbjct: 11 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 70
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
L +++++ LV++++ L + S +G PL L +GLA H S
Sbjct: 71 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIKSYLFQL--LQGLAFCH-S 125
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVA-------GYRAPEV-VET 517
+++H ++K N+L+ + ++DFGL FG P R YRAPE+ +
Sbjct: 126 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV---PVRTYXHEVVTLWYRAPEILLGC 182
Query: 518 RKVTFKSDVYSFGVLLLELLTGKA 541
+ + D++S G + E++T +A
Sbjct: 183 KYYSTAVDIWSLGCIFAEMVTRRA 206
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 104/235 (44%), Gaps = 30/235 (12%)
Query: 339 YSFDLEDLLRASAEVLGKGS---VGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVL 395
+S ED+ + +VLG+G+ V T + + V + + + R F ++E+L
Sbjct: 6 FSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFR-EVEML 64
Query: 396 GKIK-HDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALS 454
+ + H NV+ L F+ +D LV++ M GS+ + +H R +
Sbjct: 65 YQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNEL-----EASVVVQD 119
Query: 455 AARGLAHLHVSGKIVHGNIKASNILLRPDHDAC---VSDFGLN---PLFGNTTP------ 502
A L LH G I H ++K NIL + + DFGL L G+ +P
Sbjct: 120 VASALDFLHNKG-IAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPEL 178
Query: 503 --PTRVAGYRAPEVVE--TRKVTF---KSDVYSFGVLLLELLTGKAPNQASLGEE 550
P A Y APEVVE + + + + D++S GV+L LL+G P G +
Sbjct: 179 LTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSD 233
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 98/204 (48%), Gaps = 20/204 (9%)
Query: 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLK---EVAVGKREFEMQMEVLGKIKHDNVVP 405
E +G+G+ G YKA + G V +K+++ E ++ +L ++ H N+V
Sbjct: 7 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
L +++++ LV++++ L + S +G PL L +GLA H S
Sbjct: 67 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIKSYLFQL--LQGLAFCH-S 121
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVA-------GYRAPEV-VET 517
+++H ++K N+L+ + ++DFGL FG P R YRAPE+ +
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV---PVRTYXHEVVTLWYRAPEILLGC 178
Query: 518 RKVTFKSDVYSFGVLLLELLTGKA 541
+ + D++S G + E++T +A
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 98/204 (48%), Gaps = 20/204 (9%)
Query: 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLK---EVAVGKREFEMQMEVLGKIKHDNVVP 405
E +G+G+ G YKA + G V +K+++ E ++ +L ++ H N+V
Sbjct: 8 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 67
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
L +++++ LV++++ L + S +G PL L +GLA H S
Sbjct: 68 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIKSYLFQL--LQGLAFCH-S 122
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVA-------GYRAPEV-VET 517
+++H ++K N+L+ + ++DFGL FG P R YRAPE+ +
Sbjct: 123 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV---PVRTYXHEVVTLWYRAPEILLGC 179
Query: 518 RKVTFKSDVYSFGVLLLELLTGKA 541
+ + D++S G + E++T +A
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 98/204 (48%), Gaps = 20/204 (9%)
Query: 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLK---EVAVGKREFEMQMEVLGKIKHDNVVP 405
E +G+G+ G YKA + G V +K+++ E ++ +L ++ H N+V
Sbjct: 7 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
L +++++ LV++++ L + S +G PL L +GLA H S
Sbjct: 67 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIKSYLFQL--LQGLAFCH-S 121
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVA-------GYRAPEV-VET 517
+++H ++K N+L+ + ++DFGL FG P R YRAPE+ +
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV---PVRTYXHEVVTLWYRAPEILLGC 178
Query: 518 RKVTFKSDVYSFGVLLLELLTGKA 541
+ + D++S G + E++T +A
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 98/204 (48%), Gaps = 20/204 (9%)
Query: 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLK---EVAVGKREFEMQMEVLGKIKHDNVVP 405
E +G+G+ G YKA + G V +K+++ E ++ +L ++ H N+V
Sbjct: 6 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 65
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
L +++++ LV++++ L + S +G PL L +GLA H S
Sbjct: 66 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIKSYLFQL--LQGLAFCH-S 120
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVA-------GYRAPEVVE-T 517
+++H ++K N+L+ + ++DFGL FG P R YRAPE++
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV---PVRTYXHEVVTLWYRAPEILLGC 177
Query: 518 RKVTFKSDVYSFGVLLLELLTGKA 541
+ + D++S G + E++T +A
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 98/204 (48%), Gaps = 20/204 (9%)
Query: 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLK---EVAVGKREFEMQMEVLGKIKHDNVVP 405
E +G+G+ G YKA + G V +K+++ E ++ +L ++ H N+V
Sbjct: 7 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
L +++++ LV++++ L + S +G PL L +GLA H S
Sbjct: 67 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIKSYLFQL--LQGLAFCH-S 121
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVA-------GYRAPEV-VET 517
+++H ++K N+L+ + ++DFGL FG P R YRAPE+ +
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV---PVRTYXHEVVTLWYRAPEILLGC 178
Query: 518 RKVTFKSDVYSFGVLLLELLTGKA 541
+ + D++S G + E++T +A
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 98/204 (48%), Gaps = 20/204 (9%)
Query: 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLK---EVAVGKREFEMQMEVLGKIKHDNVVP 405
E +G+G+ G YKA + G V +K+++ E ++ +L ++ H N+V
Sbjct: 8 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 67
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
L +++++ LV++++ L + S +G PL L +GLA H S
Sbjct: 68 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIKSYLFQL--LQGLAFCH-S 122
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVA-------GYRAPEV-VET 517
+++H ++K N+L+ + ++DFGL FG P R YRAPE+ +
Sbjct: 123 HRVLHRDLKPENLLINTEGAIKLADFGLARAFGV---PVRTYXHEVVTLWYRAPEILLGC 179
Query: 518 RKVTFKSDVYSFGVLLLELLTGKA 541
+ + D++S G + E++T +A
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 97/201 (48%), Gaps = 14/201 (6%)
Query: 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLK---EVAVGKREFEMQMEVLGKIKHDNVVP 405
E +G+G+ G YKA + G V +K+++ E ++ +L ++ H N+V
Sbjct: 7 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
L +++++ LV++++ L + S +G PL L +GL+ H S
Sbjct: 67 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIKSYLFQL--LQGLSFCH-S 121
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLFG----NTTPPTRVAGYRAPEVVE-TRKV 520
+++H ++K N+L+ + ++DFGL FG T YRAPE++ +
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 181
Query: 521 TFKSDVYSFGVLLLELLTGKA 541
+ D++S G + E++T +A
Sbjct: 182 STAVDIWSLGCIFAEMVTRRA 202
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 98/204 (48%), Gaps = 20/204 (9%)
Query: 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLK---EVAVGKREFEMQMEVLGKIKHDNVVP 405
E +G+G+ G YKA + G V +K+++ E ++ +L ++ H N+V
Sbjct: 9 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 68
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
L +++++ LV++++ L + S +G PL L +GLA H S
Sbjct: 69 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIKSYLFQL--LQGLAFCH-S 123
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVA-------GYRAPEV-VET 517
+++H ++K N+L+ + ++DFGL FG P R YRAPE+ +
Sbjct: 124 HRVLHRDLKPENLLINTEGAIKLADFGLARAFGV---PVRTYXHEVVTLWYRAPEILLGC 180
Query: 518 RKVTFKSDVYSFGVLLLELLTGKA 541
+ + D++S G + E++T +A
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRRA 204
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 94/216 (43%), Gaps = 24/216 (11%)
Query: 344 EDLLRASAEVLGKGSVGTSYKA-VLEEGTTVVVKRLKEVAVGKREFEMQME--------V 394
E ++ S V+GKG G Y +++ + +K ++ R EMQ +
Sbjct: 19 ERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLS---RITEMQQVEAFLREGLL 75
Query: 395 LGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALS 454
+ + H NV+ L + L + +P LL R R P D + L
Sbjct: 76 MRGLNHPNVLALIGIMLPPEG--LPHVLLPYMCHGDLLQFIRSPQRNPTVKD-LISFGLQ 132
Query: 455 AARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN----TTPPTRVA--- 507
ARG+ +L K VH ++ A N +L V+DFGL + + R A
Sbjct: 133 VARGMEYL-AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLP 191
Query: 508 -GYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAP 542
+ A E ++T + T KSDV+SFGVLL ELLT AP
Sbjct: 192 VKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAP 227
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 98/204 (48%), Gaps = 20/204 (9%)
Query: 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLK---EVAVGKREFEMQMEVLGKIKHDNVVP 405
E +G+G+ G YKA + G V +K+++ E ++ +L ++ H N+V
Sbjct: 10 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 69
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
L +++++ LV++++ L + S +G PL L +GLA H S
Sbjct: 70 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIKSYLFQL--LQGLAFCH-S 124
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVA-------GYRAPEV-VET 517
+++H ++K N+L+ + ++DFGL FG P R YRAPE+ +
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV---PVRTYXHEVVTLWYRAPEILLGC 181
Query: 518 RKVTFKSDVYSFGVLLLELLTGKA 541
+ + D++S G + E++T +A
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 118/286 (41%), Gaps = 43/286 (15%)
Query: 344 EDLLRASAEVLGKGSVGTSYKAVLEE--------GTTVVVKRLKEVAVGKRE-FEMQMEV 394
EDL+ E LG+G+ +K V E T V++K L + E F +
Sbjct: 8 EDLI--FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASM 65
Query: 395 LGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALS 454
+ K+ H ++V + DE +LV +++ GSL L ++ + W ++ +A
Sbjct: 66 MSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNC--INILW--KLEVAKQ 121
Query: 455 AARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL----NPLFGNTTPPTRVAGYR 510
A + H ++HGN+ A NILL + D + +P T P + R
Sbjct: 122 LAWAM-HFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQER 180
Query: 511 AP----EVVETRK-VTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREE 565
P E +E K + +D +SFG L E+ +G ++L D R +Q E+
Sbjct: 181 IPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSAL-----DSQRKLQ--FYED 233
Query: 566 WTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVR 611
R+ + +L + C+ PD RP+ + ++R
Sbjct: 234 -----------RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIR 268
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 94/195 (48%), Gaps = 21/195 (10%)
Query: 357 GSVGTSYKAVLEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYY- 411
GSV +SY ++ G + VK+L + + KR + ++ +L +KH+NV+ L +
Sbjct: 65 GSVCSSYD--VKSGLKIAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTP 121
Query: 412 --SKDEKLLVY--DYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGK 467
S +E VY ++ L+ ++ + + D+ + RGL ++H S
Sbjct: 122 ATSLEEFNDVYLVTHLMGADLNNIVKCQKLTD------DHVQFLIYQILRGLKYIH-SAD 174
Query: 468 IVHGNIKASNILLRPDHDACVSDFGLNPLFGN-TTPPTRVAGYRAPEV-VETRKVTFKSD 525
I+H ++K SN+ + D + + DFGL + T YRAPE+ + D
Sbjct: 175 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNMTVD 234
Query: 526 VYSFGVLLLELLTGK 540
++S G ++ ELLTG+
Sbjct: 235 IWSVGCIMAELLTGR 249
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 98/204 (48%), Gaps = 20/204 (9%)
Query: 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLK---EVAVGKREFEMQMEVLGKIKHDNVVP 405
E +G+G+ G YKA + G V +K+++ E ++ +L ++ H N+V
Sbjct: 8 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 67
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
L +++++ LV++++ L + S +G PL L +GLA H S
Sbjct: 68 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIKSYLFQL--LQGLAFCH-S 122
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVA-------GYRAPEV-VET 517
+++H ++K N+L+ + ++DFGL FG P R YRAPE+ +
Sbjct: 123 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV---PVRTYXHEVVTLWYRAPEILLGC 179
Query: 518 RKVTFKSDVYSFGVLLLELLTGKA 541
+ + D++S G + E++T +A
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 89/206 (43%), Gaps = 21/206 (10%)
Query: 352 EVLGKGSVGTSYKAV-----LEEGTTVVVKRLKEVA---VGKREFEMQMEVLGKIKHDNV 403
E LG G K LE + KR + V + E E ++ +L ++ H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNI 77
Query: 404 VPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLH 463
+ L Y ++ + +L+ + + G L L + + L + G+ +LH
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFL-----AQKESLSEEEATSFIKQILDGVNYLH 132
Query: 464 VSGKIVHGNIKASNILLR----PDHDACVSDFGLNPLFGNTTPPTRVAG---YRAPEVVE 516
+ KI H ++K NI+L P + DFGL + + G + APE+V
Sbjct: 133 -TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVN 191
Query: 517 TRKVTFKSDVYSFGVLLLELLTGKAP 542
+ ++D++S GV+ LL+G +P
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASP 217
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 55/112 (49%), Gaps = 9/112 (8%)
Query: 447 NRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNP-------LFGN 499
N + + + G+ +L S VH ++ A N+LL H A +SDFGL+ +
Sbjct: 470 NIIELVHQVSMGMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 528
Query: 500 TTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEE 550
T + APE + K + KSDV+SFGVL+ E + G+ P + G E
Sbjct: 529 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 580
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 55/112 (49%), Gaps = 9/112 (8%)
Query: 447 NRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNP-------LFGN 499
N + + + G+ +L S VH ++ A N+LL H A +SDFGL+ +
Sbjct: 471 NIIELVHQVSMGMKYLEES-NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 529
Query: 500 TTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEE 550
T + APE + K + KSDV+SFGVL+ E + G+ P + G E
Sbjct: 530 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 581
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 95/201 (47%), Gaps = 14/201 (6%)
Query: 350 SAEVLGKGSVGTSYKA---VLEEGTTVVVKRLKEVAVGKREFEM-QMEVLGKIKHDNVVP 405
E +G+G+ G YKA + E + RL G + ++ +L ++ H N+V
Sbjct: 7 KVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
L +++++ LV++++ L + S +G PL L +GLA H S
Sbjct: 67 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIKSYLFQL--LQGLAFCH-S 121
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLFG----NTTPPTRVAGYRAPEV-VETRKV 520
+++H ++K N+L+ + ++DFGL FG T YRAPE+ + +
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 181
Query: 521 TFKSDVYSFGVLLLELLTGKA 541
+ D++S G + E++T +A
Sbjct: 182 STAVDIWSLGCIFAEMVTRRA 202
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 95/201 (47%), Gaps = 14/201 (6%)
Query: 350 SAEVLGKGSVGTSYKA---VLEEGTTVVVKRLKEVAVGKREFEM-QMEVLGKIKHDNVVP 405
E +G+G+ G YKA + E + RL G + ++ +L ++ H N+V
Sbjct: 6 KVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVK 65
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
L +++++ LV++++ L + S +G PL L +GLA H S
Sbjct: 66 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIKSYLFQL--LQGLAFCH-S 120
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLFG----NTTPPTRVAGYRAPEV-VETRKV 520
+++H ++K N+L+ + ++DFGL FG T YRAPE+ + +
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 521 TFKSDVYSFGVLLLELLTGKA 541
+ D++S G + E++T +A
Sbjct: 181 STAVDIWSLGCIFAEMVTRRA 201
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 88/199 (44%), Gaps = 25/199 (12%)
Query: 355 GKGSVGTSYKAVLEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVVPLRAFY 410
+G V +Y A+LE V +K+L + KR + ++ ++ + H N++ L +
Sbjct: 36 AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVF 92
Query: 411 YSK------DEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
+ + +V + M A + + LD + + G+ HLH
Sbjct: 93 TPQKSLEEFQDVYIVMELMDANLCQVI--------QMELDHERMSYLLYQMLCGIKHLHS 144
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT---TPPTRVAGYRAPEVVETRKVT 521
+G I+H ++K SNI+++ D + DFGL G + P YRAPEV+
Sbjct: 145 AG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMGYK 203
Query: 522 FKSDVYSFGVLLLELLTGK 540
D++S G ++ E++ K
Sbjct: 204 ENVDIWSVGCIMGEMVCHK 222
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 86/202 (42%), Gaps = 16/202 (7%)
Query: 351 AEVLGKGSVGTSYKAV---LEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLR 407
+ LG+G+ G AV EE V + +K + ++ + + H+NVV
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFY 71
Query: 408 AFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGK 467
+ + L +Y G L + G + R G+ +LH G
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP-----DAQRFFHQLMAGVVYLHGIG- 125
Query: 468 IVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPP---TRVAG---YRAPEVVETRKVT 521
I H +IK N+LL + +SDFGL +F ++ G Y APE+++ R+
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 522 FKS-DVYSFGVLLLELLTGKAP 542
+ DV+S G++L +L G+ P
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELP 207
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 98/204 (48%), Gaps = 20/204 (9%)
Query: 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLK---EVAVGKREFEMQMEVLGKIKHDNVVP 405
E +G+G+ G YKA + G V +K+++ E ++ +L ++ H N+V
Sbjct: 7 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
L +++++ LV++++ L + S +G PL L +GLA H S
Sbjct: 67 LLDVIHTENKLYLVFEFL-HQDLKDFMDASALTG-IPLPLIKSYLFQL--LQGLAFCH-S 121
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVA-------GYRAPEV-VET 517
+++H ++K N+L+ + ++DFGL FG P R YRAPE+ +
Sbjct: 122 HRVLHRDLKPENLLINTEGAIKLADFGLARAFGV---PVRTYXHEVVTLWYRAPEILLGC 178
Query: 518 RKVTFKSDVYSFGVLLLELLTGKA 541
+ + D++S G + E++T +A
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 86/202 (42%), Gaps = 16/202 (7%)
Query: 351 AEVLGKGSVGTSYKAV---LEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLR 407
+ LG+G+ G AV EE V + +K + ++ + + H+NVV
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFY 70
Query: 408 AFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGK 467
+ + L +Y G L + G + R G+ +LH G
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP-----DAQRFFHQLMAGVVYLHGIG- 124
Query: 468 IVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPP---TRVAG---YRAPEVVETRKVT 521
I H +IK N+LL + +SDFGL +F ++ G Y APE+++ R+
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 522 FKS-DVYSFGVLLLELLTGKAP 542
+ DV+S G++L +L G+ P
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELP 206
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 33/216 (15%)
Query: 352 EVLGKGSVGTSYKAVL------EEGTTVVVKRLKEVAVG--KREFEMQMEVLGKI-KHDN 402
+ LG G+ G +A + V VK LK A K +++++ + +H+N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 403 VVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSG-----------RTPLDWDNRMRI 451
+V L L++ +Y G L L R G L + +
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHF 171
Query: 452 ALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNP---------LFGNTTP 502
+ A+G+A L S +H ++ A N+LL H A + DFGL + GN
Sbjct: 172 SSQVAQGMAFL-ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 230
Query: 503 PTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT 538
P + + APE + T +SDV+S+G+LL E+ +
Sbjct: 231 PVK---WMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 24/201 (11%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVV---- 404
+G G+ G+ A + G V VK+L + + KR + ++ +L +KH+NV+
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 93
Query: 405 ---PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
P R+ D L+ + + L+ ++ + + D+ + RGL +
Sbjct: 94 VFTPARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTD------DHVQFLIYQILRGLKY 145
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN-TTPPTRVAGYRAPEV-VETRK 519
+H S I+H ++K SN+ + D + + DFGL + T YRAPE+ +
Sbjct: 146 IH-SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMH 204
Query: 520 VTFKSDVYSFGVLLLELLTGK 540
D++S G ++ ELLTG+
Sbjct: 205 YNQTVDIWSVGCIMAELLTGR 225
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 88/205 (42%), Gaps = 18/205 (8%)
Query: 353 VLGKGSVGTSYKA-VLEEGTTVVVKRLK-EVAVGKREFEMQM---EVLGKIK-HDNVVPL 406
VLGKGS G A V E G VK LK +V + + E M +L + H + L
Sbjct: 30 VLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQL 89
Query: 407 RAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRI-ALSAARGLAHLHVS 465
+ + D V +++ G L + SR R R A L LH
Sbjct: 90 FCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEA------RARFYAAEIISALMFLHDK 143
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGL--NPLFGNTTPPTRVA--GYRAPEVVETRKVT 521
G I++ ++K N+LL + ++DFG+ + T T Y APE+++
Sbjct: 144 G-IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYG 202
Query: 522 FKSDVYSFGVLLLELLTGKAPNQAS 546
D ++ GVLL E+L G AP +A
Sbjct: 203 PAVDWWAMGVLLYEMLCGHAPFEAE 227
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 77/175 (44%), Gaps = 17/175 (9%)
Query: 378 LKEVAVGKREFEMQMEVLGKI-KHDNVVPLRAFYYSKDEKLLVYDYMPAGSL-SALLHGS 435
+K + KR+ ++E+L + +H N++ L+ Y +V + M G L +L
Sbjct: 52 VKIIDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQK 111
Query: 436 RGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPD----HDACVSDF 491
S R + + + + +LH G +VH ++K SNIL + + DF
Sbjct: 112 FFSER------EASAVLFTITKTVEYLHAQG-VVHRDLKPSNILYVDESGNPESIRICDF 164
Query: 492 GLNPLF----GNTTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAP 542
G G P A + APEV+E + D++S GVLL +LTG P
Sbjct: 165 GFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 86/202 (42%), Gaps = 16/202 (7%)
Query: 351 AEVLGKGSVGTSYKAV---LEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLR 407
+ LG+G+ G AV EE V + +K + ++ + + H+NVV
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 408 AFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGK 467
+ + L +Y G L + G + R G+ +LH G
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP-----DAQRFFHQLMAGVVYLHGIG- 124
Query: 468 IVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPP---TRVAG---YRAPEVVETRKVT 521
I H +IK N+LL + +SDFGL +F ++ G Y APE+++ R+
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 522 FKS-DVYSFGVLLLELLTGKAP 542
+ DV+S G++L +L G+ P
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELP 206
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 86/202 (42%), Gaps = 16/202 (7%)
Query: 351 AEVLGKGSVGTSYKAV---LEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLR 407
+ LG+G+ G AV EE V + +K + ++ + + H+NVV
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 408 AFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGK 467
+ + L +Y G L + G + R G+ +LH G
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP-----DAQRFFHQLMAGVVYLHGIG- 125
Query: 468 IVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPP---TRVAG---YRAPEVVETRKVT 521
I H +IK N+LL + +SDFGL +F ++ G Y APE+++ R+
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 522 FKS-DVYSFGVLLLELLTGKAP 542
+ DV+S G++L +L G+ P
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELP 207
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 92/201 (45%), Gaps = 24/201 (11%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVV---- 404
+G G+ G+ A + G V VK+L + + KR + ++ +L +KH+NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 405 ---PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
P R+ D L+ + + L+ ++ + + D+ + RGL +
Sbjct: 89 VFTPARSLEEFNDVYLVTH--LMGADLNNIVKSQKLTD------DHVQFLIYQILRGLKY 140
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGL-NPLFGNTTPPTRVAGYRAPEV-VETRK 519
+H S I+H ++K SN+ + D + + DFGL T YRAPE+ +
Sbjct: 141 IH-SADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 520 VTFKSDVYSFGVLLLELLTGK 540
D++S G ++ ELLTG+
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 93/195 (47%), Gaps = 17/195 (8%)
Query: 357 GSVGTSYKAVLEEGTTVVVKRL---KEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSK 413
G V ++Y V T V +K++ + +R ++++L + +H+NV+ +R +
Sbjct: 57 GMVSSAYDHV--RKTRVAIKKISPFEHQTYCQRTLR-EIQILLRFRHENVIGIRDILRAS 113
Query: 414 DEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNI 473
+ + Y+ + L+ S + L D+ RGL ++H S ++H ++
Sbjct: 114 TLEAMRDVYIVQDLMETDLYKLLKSQQ--LSNDHICYFLYQILRGLKYIH-SANVLHRDL 170
Query: 474 KASNILLRPDHDACVSDFGL----NPLFGNT---TPPTRVAGYRAPEVVETRKVTFKS-D 525
K SN+L+ D + DFGL +P +T T YRAPE++ K KS D
Sbjct: 171 KPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSID 230
Query: 526 VYSFGVLLLELLTGK 540
++S G +L E+L+ +
Sbjct: 231 IWSVGCILAEMLSNR 245
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 86/202 (42%), Gaps = 16/202 (7%)
Query: 351 AEVLGKGSVGTSYKAV---LEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLR 407
+ LG+G+ G AV EE V + +K + ++ + + H+NVV
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 408 AFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGK 467
+ + L +Y G L + G + R G+ +LH G
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP-----DAQRFFHQLMAGVVYLHGIG- 125
Query: 468 IVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPP---TRVAG---YRAPEVVETRKVT 521
I H +IK N+LL + +SDFGL +F ++ G Y APE+++ R+
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 522 FKS-DVYSFGVLLLELLTGKAP 542
+ DV+S G++L +L G+ P
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELP 207
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 112/278 (40%), Gaps = 41/278 (14%)
Query: 352 EVLGKGSVGTSYKAVLEE--------GTTVVVKRLKEVAVGKRE-FEMQMEVLGKIKHDN 402
E LG+G+ +K V E T V++K L + E F ++ K+ H +
Sbjct: 14 ESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKH 73
Query: 403 VVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHL 462
+V DE +LV +++ GSL L ++ + W + L+AA H
Sbjct: 74 LVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNC--INILWKLEVAKQLAAA---MHF 128
Query: 463 HVSGKIVHGNIKASNILLRPDHDACVSDFGL----NPLFGNTTPPTRVAGYRAP----EV 514
++HGN+ A NILL + D + +P T P + R P E
Sbjct: 129 LEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPEC 188
Query: 515 VETRK-VTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDV 573
+E K + +D +SFG L E+ +G ++L D R +Q E+
Sbjct: 189 IENPKNLNLATDKWSFGTTLWEICSGGDKPLSAL-----DSQRKLQ--FYED-------- 233
Query: 574 ELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVR 611
R+ + +L + C+ PD RP+ + ++R
Sbjct: 234 ---RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIR 268
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 86/202 (42%), Gaps = 16/202 (7%)
Query: 351 AEVLGKGSVGTSYKAV---LEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLR 407
+ LG+G+ G AV EE V + +K + ++ + + H+NVV
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 408 AFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGK 467
+ + L +Y G L + G + R G+ +LH G
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP-----DAQRFFHQLMAGVVYLHGIG- 124
Query: 468 IVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPP---TRVAG---YRAPEVVETRKVT 521
I H +IK N+LL + +SDFGL +F ++ G Y APE+++ R+
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 522 FKS-DVYSFGVLLLELLTGKAP 542
+ DV+S G++L +L G+ P
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELP 206
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 86/202 (42%), Gaps = 16/202 (7%)
Query: 351 AEVLGKGSVGTSYKAV---LEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLR 407
+ LG+G+ G AV EE V + +K + ++ + + H+NVV
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 408 AFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGK 467
+ + L +Y G L + G + R G+ +LH G
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP-----DAQRFFHQLMAGVVYLHGIG- 124
Query: 468 IVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPP---TRVAG---YRAPEVVETRKVT 521
I H +IK N+LL + +SDFGL +F ++ G Y APE+++ R+
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 522 FKS-DVYSFGVLLLELLTGKAP 542
+ DV+S G++L +L G+ P
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELP 206
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 86/202 (42%), Gaps = 16/202 (7%)
Query: 351 AEVLGKGSVGTSYKAV---LEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLR 407
+ LG+G+ G AV EE V + +K + ++ + + H+NVV
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFY 71
Query: 408 AFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGK 467
+ + L +Y G L + G + R G+ +LH G
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP-----DAQRFFHQLMAGVVYLHGIG- 125
Query: 468 IVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPP---TRVAG---YRAPEVVETRKVT 521
I H +IK N+LL + +SDFGL +F ++ G Y APE+++ R+
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 185
Query: 522 FKS-DVYSFGVLLLELLTGKAP 542
+ DV+S G++L +L G+ P
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELP 207
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 86/202 (42%), Gaps = 16/202 (7%)
Query: 351 AEVLGKGSVGTSYKAV---LEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLR 407
+ LG+G+ G AV EE V + +K + ++ + + H+NVV
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 408 AFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGK 467
+ + L +Y G L + G + R G+ +LH G
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP-----DAQRFFHQLMAGVVYLHGIG- 124
Query: 468 IVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPP---TRVAG---YRAPEVVETRKVT 521
I H +IK N+LL + +SDFGL +F ++ G Y APE+++ R+
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 522 FKS-DVYSFGVLLLELLTGKAP 542
+ DV+S G++L +L G+ P
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 86/202 (42%), Gaps = 16/202 (7%)
Query: 351 AEVLGKGSVGTSYKAV---LEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLR 407
+ LG+G+ G AV EE V + +K + ++ + + H+NVV
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFY 70
Query: 408 AFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGK 467
+ + L +Y G L + G + R G+ +LH G
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP-----DAQRFFHQLMAGVVYLHGIG- 124
Query: 468 IVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPP---TRVAG---YRAPEVVETRKVT 521
I H +IK N+LL + +SDFGL +F ++ G Y APE+++ R+
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 522 FKS-DVYSFGVLLLELLTGKAP 542
+ DV+S G++L +L G+ P
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELP 206
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 24/201 (11%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVV---- 404
+G G+ G+ A + G V VK+L + + KR + ++ +L +KH+NV+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 95
Query: 405 ---PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
P R+ D L+ + + L+ ++ + + D+ + RGL +
Sbjct: 96 VFTPARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTD------DHVQFLIYQILRGLKY 147
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN-TTPPTRVAGYRAPEV-VETRK 519
+H S I+H ++K SN+ + D + + DFGL + T YRAPE+ +
Sbjct: 148 IH-SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMH 206
Query: 520 VTFKSDVYSFGVLLLELLTGK 540
D++S G ++ ELLTG+
Sbjct: 207 YNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 24/201 (11%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVV---- 404
+G G+ G+ A + G V VK+L + + KR + ++ +L +KH+NV+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 95
Query: 405 ---PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
P R+ D L+ + + L+ ++ + + D+ + RGL +
Sbjct: 96 VFTPARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTD------DHVQFLIYQILRGLKY 147
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN-TTPPTRVAGYRAPEV-VETRK 519
+H S I+H ++K SN+ + D + + DFGL + T YRAPE+ +
Sbjct: 148 IH-SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMH 206
Query: 520 VTFKSDVYSFGVLLLELLTGK 540
D++S G ++ ELLTG+
Sbjct: 207 YNQTVDIWSVGCIMAELLTGR 227
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 86/202 (42%), Gaps = 16/202 (7%)
Query: 351 AEVLGKGSVGTSYKAV---LEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLR 407
+ LG+G+ G AV EE V + +K + ++ + + H+NVV
Sbjct: 11 VQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 408 AFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGK 467
+ + L +Y G L + G + R G+ +LH G
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP-----DAQRFFHQLMAGVVYLHGIG- 124
Query: 468 IVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPP---TRVAG---YRAPEVVETRKVT 521
I H +IK N+LL + +SDFGL +F ++ G Y APE+++ R+
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 522 FKS-DVYSFGVLLLELLTGKAP 542
+ DV+S G++L +L G+ P
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 86/202 (42%), Gaps = 16/202 (7%)
Query: 351 AEVLGKGSVGTSYKAV---LEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLR 407
+ LG+G+ G AV EE V + +K + ++ + + H+NVV
Sbjct: 10 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 69
Query: 408 AFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGK 467
+ + L +Y G L + G + R G+ +LH G
Sbjct: 70 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP-----DAQRFFHQLMAGVVYLHGIG- 123
Query: 468 IVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPP---TRVAG---YRAPEVVETRKVT 521
I H +IK N+LL + +SDFGL +F ++ G Y APE+++ R+
Sbjct: 124 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 183
Query: 522 FKS-DVYSFGVLLLELLTGKAP 542
+ DV+S G++L +L G+ P
Sbjct: 184 AEPVDVWSCGIVLTAMLAGELP 205
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 24/201 (11%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVV---- 404
+G G+ G+ A + G V VK+L + + KR + ++ +L +KH+NV+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 95
Query: 405 ---PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
P R+ D L+ + + L+ ++ + + D+ + RGL +
Sbjct: 96 VFTPARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTD------DHVQFLIYQILRGLKY 147
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN-TTPPTRVAGYRAPEV-VETRK 519
+H S I+H ++K SN+ + D + + DFGL + T YRAPE+ +
Sbjct: 148 IH-SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMH 206
Query: 520 VTFKSDVYSFGVLLLELLTGK 540
D++S G ++ ELLTG+
Sbjct: 207 YNQTVDIWSVGCIMAELLTGR 227
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 95/229 (41%), Gaps = 30/229 (13%)
Query: 352 EVLGKGSVGT----SYKAVLEEGTTVVVKRLKEVAVGKRE----FEMQMEVLGKIKHDNV 403
E LG GS G + A + +V VK LK + + E F ++ + + H N+
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 404 VPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLH 463
+ L + K+ V + P GSL L +G R A+ A G+ +L
Sbjct: 78 IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLL----GTLSRYAVQVAEGMGYLE 132
Query: 464 VSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAGYR-------APEVVE 516
S + +H ++ A N+LL + DFGL + +R APE ++
Sbjct: 133 -SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 191
Query: 517 TRKVTFKSDVYSFGVLLLELLT-GKAPNQA--------SLGEEGIDLPR 556
TR + SD + FGV L E+ T G+ P + +EG LPR
Sbjct: 192 TRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR 240
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 24/201 (11%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVV---- 404
+G G+ G+ A + G V VK+L + + KR + ++ +L +KH+NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 405 ---PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
P R+ D L+ + + L+ ++ + + D+ + RGL +
Sbjct: 89 VFTPARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTD------DHVQFLIYQILRGLKY 140
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN-TTPPTRVAGYRAPEV-VETRK 519
+H S I+H ++K SN+ + D + + DFGL + T YRAPE+ +
Sbjct: 141 IH-SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNAMH 199
Query: 520 VTFKSDVYSFGVLLLELLTGK 540
D++S G ++ ELLTG+
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 98/204 (48%), Gaps = 20/204 (9%)
Query: 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLK---EVAVGKREFEMQMEVLGKIKHDNVVP 405
E +G+G+ G YKA + G V +K+++ E ++ +L ++ H N+V
Sbjct: 10 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 69
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
L +++++ LV++++ L + S +G PL L +GLA H S
Sbjct: 70 LLDVIHTENKLYLVFEHVDQ-DLKKFMDASALTG-IPLPLIKSYLFQL--LQGLAFCH-S 124
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-------YRAPEV-VET 517
+++H ++K N+L+ + ++DFGL FG P R YRAPE+ +
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV---PVRTYXHEVVTLWYRAPEILLGC 181
Query: 518 RKVTFKSDVYSFGVLLLELLTGKA 541
+ + D++S G + E++T +A
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 86/202 (42%), Gaps = 16/202 (7%)
Query: 351 AEVLGKGSVGTSYKAV---LEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLR 407
+ LG+G+ G AV EE V + +K + ++ + + H+NVV
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 408 AFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGK 467
+ + L +Y G L + G + R G+ +LH G
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP-----DAQRFFHQLMAGVVYLHGIG- 124
Query: 468 IVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPP---TRVAG---YRAPEVVETRKVT 521
I H +IK N+LL + +SDFGL +F ++ G Y APE+++ R+
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 522 FKS-DVYSFGVLLLELLTGKAP 542
+ DV+S G++L +L G+ P
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELP 206
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 86/202 (42%), Gaps = 16/202 (7%)
Query: 351 AEVLGKGSVGTSYKAV---LEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLR 407
+ LG+G+ G AV EE V + +K + ++ + + H+NVV
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 408 AFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGK 467
+ + L +Y G L + G + R G+ +LH G
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP-----DAQRFFHQLMAGVVYLHGIG- 125
Query: 468 IVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPP---TRVAG---YRAPEVVETRKVT 521
I H +IK N+LL + +SDFGL +F ++ G Y APE+++ R+
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 522 FKS-DVYSFGVLLLELLTGKAP 542
+ DV+S G++L +L G+ P
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELP 207
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 24/201 (11%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVV---- 404
+G G+ G+ A + G V VK+L + + KR + ++ +L +KH+NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 405 ---PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
P R+ D L+ + + L+ ++ + + D+ + RGL +
Sbjct: 89 VFTPARSLEEFNDVYLVTH--LMGADLNNIVKXQKLTD------DHVQFLIYQILRGLKY 140
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN-TTPPTRVAGYRAPEV-VETRK 519
+H S I+H ++K SN+ + D + + DFGL + T YRAPE+ +
Sbjct: 141 IH-SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 520 VTFKSDVYSFGVLLLELLTGK 540
D++S G ++ ELLTG+
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 24/201 (11%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVV---- 404
+G G+ G+ A + G V VK+L + + KR + ++ +L +KH+NV+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 93
Query: 405 ---PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
P R+ D L+ + + L+ ++ + + D+ + RGL +
Sbjct: 94 VFTPARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTD------DHVQFLIYQILRGLKY 145
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN-TTPPTRVAGYRAPEV-VETRK 519
+H S I+H ++K SN+ + D + + DFGL + T YRAPE+ +
Sbjct: 146 IH-SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMH 204
Query: 520 VTFKSDVYSFGVLLLELLTGK 540
D++S G ++ ELLTG+
Sbjct: 205 YNQTVDIWSVGCIMAELLTGR 225
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 24/201 (11%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVV---- 404
+G G+ G+ A + G V VK+L + + KR + ++ +L +KH+NV+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 90
Query: 405 ---PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
P R+ D L+ + + L+ ++ + + D+ + RGL +
Sbjct: 91 VFTPARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTD------DHVQFLIYQILRGLKY 142
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN-TTPPTRVAGYRAPEV-VETRK 519
+H S I+H ++K SN+ + D + + DFGL + T YRAPE+ +
Sbjct: 143 IH-SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMH 201
Query: 520 VTFKSDVYSFGVLLLELLTGK 540
D++S G ++ ELLTG+
Sbjct: 202 YNQTVDIWSVGCIMAELLTGR 222
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 24/201 (11%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVV---- 404
+G G+ G+ A + G V VK+L + + KR + ++ +L +KH+NV+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 94
Query: 405 ---PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
P R+ D L+ + + L+ ++ + + D+ + RGL +
Sbjct: 95 VFTPARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTD------DHVQFLIYQILRGLKY 146
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN-TTPPTRVAGYRAPEV-VETRK 519
+H S I+H ++K SN+ + D + + DFGL + T YRAPE+ +
Sbjct: 147 IH-SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMH 205
Query: 520 VTFKSDVYSFGVLLLELLTGK 540
D++S G ++ ELLTG+
Sbjct: 206 YNQTVDIWSVGCIMAELLTGR 226
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 88/199 (44%), Gaps = 25/199 (12%)
Query: 355 GKGSVGTSYKAVLEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVVPLRAFY 410
+G V +Y A+LE V +K+L + KR + ++ ++ + H N++ L +
Sbjct: 36 AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVF 92
Query: 411 YSK------DEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
+ + +V + M A + + LD + + G+ HLH
Sbjct: 93 TPQKSLEEFQDVYIVMELMDANLCQVI--------QMELDHERMSYLLYQMLCGIKHLHS 144
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT---TPPTRVAGYRAPEVVETRKVT 521
+G I+H ++K SNI+++ D + DFGL G + P YRAPEV+
Sbjct: 145 AG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMGYK 203
Query: 522 FKSDVYSFGVLLLELLTGK 540
D++S G ++ E++ K
Sbjct: 204 ENVDLWSVGCIMGEMVCHK 222
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 95/221 (42%), Gaps = 16/221 (7%)
Query: 354 LGKGSVGTSYKAVLEE-----GTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRA 408
LGKG Y+ + VV K + K + ++ + + + +VV
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 409 FYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKI 468
F+ D +V + SL L H R + P + MR +G+ +LH + ++
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLEL-HKRRKAVTEP-EARYFMR---QTIQGVQYLH-NNRV 163
Query: 469 VHGNIKASNILLRPDHDACVSDFGLNPL--FGNTTPPTRVA--GYRAPEVVETRKVTFKS 524
+H ++K N+ L D D + DFGL F T Y APEV+ + +F+
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGHSFEV 223
Query: 525 DVYSFGVLLLELLTGKAPNQAS-LGEEGIDLPRWVQSVVRE 564
D++S G +L LL GK P + S L E I + + SV R
Sbjct: 224 DIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRH 264
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 24/201 (11%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVV---- 404
+G G+ G+ A + G V VK+L + + KR + ++ +L +KH+NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 405 ---PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
P R+ D L+ + + L+ ++ + + D+ + RGL +
Sbjct: 89 VFTPARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTD------DHVQFLIYQILRGLKY 140
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN-TTPPTRVAGYRAPEV-VETRK 519
+H S I+H ++K SN+ + D + + DFGL + T YRAPE+ +
Sbjct: 141 IH-SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATRWYRAPEIMLNWMH 199
Query: 520 VTFKSDVYSFGVLLLELLTGK 540
D++S G ++ ELLTG+
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 86/202 (42%), Gaps = 16/202 (7%)
Query: 351 AEVLGKGSVGTSYKAV---LEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLR 407
+ LG+G+ G AV EE V + +K + ++ + + H+NVV
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 408 AFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGK 467
+ + L +Y G L + G + R G+ +LH G
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP-----DAQRFFHQLMAGVVYLHGIG- 125
Query: 468 IVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPP---TRVAG---YRAPEVVETRKVT 521
I H +IK N+LL + +SDFGL +F ++ G Y APE+++ R+
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 522 FKS-DVYSFGVLLLELLTGKAP 542
+ DV+S G++L +L G+ P
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELP 207
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 86/202 (42%), Gaps = 16/202 (7%)
Query: 351 AEVLGKGSVGTSYKAV---LEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLR 407
+ LG+G+ G AV EE V + +K + ++ + + H+NVV
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 408 AFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGK 467
+ + L +Y G L + G + R G+ +LH G
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP-----DAQRFFHQLMAGVVYLHGIG- 125
Query: 468 IVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPP---TRVAG---YRAPEVVETRKVT 521
I H +IK N+LL + +SDFGL +F ++ G Y APE+++ R+
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 522 FKS-DVYSFGVLLLELLTGKAP 542
+ DV+S G++L +L G+ P
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELP 207
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 86/202 (42%), Gaps = 16/202 (7%)
Query: 351 AEVLGKGSVGTSYKAV---LEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLR 407
+ LG+G+ G AV EE V + +K + ++ + + H+NVV
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 408 AFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGK 467
+ + L +Y G L + G + R G+ +LH G
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP-----DAQRFFHQLMAGVVYLHGIG- 125
Query: 468 IVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPP---TRVAG---YRAPEVVETRKVT 521
I H +IK N+LL + +SDFGL +F ++ G Y APE+++ R+
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 522 FKS-DVYSFGVLLLELLTGKAP 542
+ DV+S G++L +L G+ P
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELP 207
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 86/202 (42%), Gaps = 16/202 (7%)
Query: 351 AEVLGKGSVGTSYKAV---LEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLR 407
+ LG+G+ G AV EE V + +K + ++ + + H+NVV
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 408 AFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGK 467
+ + L +Y G L + G + R G+ +LH G
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP-----DAQRFFHQLMAGVVYLHGIG- 124
Query: 468 IVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPP---TRVAG---YRAPEVVETRKVT 521
I H +IK N+LL + +SDFGL +F ++ G Y APE+++ R+
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 522 FKS-DVYSFGVLLLELLTGKAP 542
+ DV+S G++L +L G+ P
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELP 206
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 97/221 (43%), Gaps = 16/221 (7%)
Query: 354 LGKGSVGTSYKAVLEE-----GTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRA 408
LGKG Y+ + VV K + K + ++ + + + +VV
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 409 FYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKI 468
F+ D +V + SL L H R + P + MR +G+ +LH + ++
Sbjct: 94 FFEDDDFVYVVLEICRRRSLLEL-HKRRKAVTEP-EARYFMR---QTIQGVQYLH-NNRV 147
Query: 469 VHGNIKASNILLRPDHDACVSDFGL-NPLFGNTTPPTRVAG---YRAPEVVETRKVTFKS 524
+H ++K N+ L D D + DFGL + + + G Y APEV+ + +F+
Sbjct: 148 IHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEV 207
Query: 525 DVYSFGVLLLELLTGKAPNQAS-LGEEGIDLPRWVQSVVRE 564
D++S G +L LL GK P + S L E I + + SV R
Sbjct: 208 DIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRH 248
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 24/201 (11%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVV---- 404
+G G+ G+ A + G V VK+L + + KR + ++ +L +KH+NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 405 ---PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
P R+ D L+ + + L+ ++ + + D+ + RGL +
Sbjct: 89 VFTPARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTD------DHVQFLIYQILRGLKY 140
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN-TTPPTRVAGYRAPEV-VETRK 519
+H S I+H ++K SN+ + D + + DFGL + T YRAPE+ +
Sbjct: 141 IH-SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 520 VTFKSDVYSFGVLLLELLTGK 540
D++S G ++ ELLTG+
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 24/201 (11%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVV---- 404
+G G+ G+ A + G V VK+L + + KR + ++ +L +KH+NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 405 ---PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
P R+ D L+ + + L+ ++ + + D+ + RGL +
Sbjct: 89 VFTPARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTD------DHVQFLIYQILRGLKY 140
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN-TTPPTRVAGYRAPEV-VETRK 519
+H S I+H ++K SN+ + D + + DFGL + T YRAPE+ +
Sbjct: 141 IH-SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 520 VTFKSDVYSFGVLLLELLTGK 540
D++S G ++ ELLTG+
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 24/201 (11%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVV---- 404
+G G+ G+ A + G V VK+L + + KR + ++ +L +KH+NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 405 ---PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
P R+ D L+ + + L+ ++ + + D+ + RGL +
Sbjct: 89 VFTPARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTD------DHVQFLIYQILRGLKY 140
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN-TTPPTRVAGYRAPEV-VETRK 519
+H S I+H ++K SN+ + D + + DFGL + T YRAPE+ +
Sbjct: 141 IH-SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 520 VTFKSDVYSFGVLLLELLTGK 540
D++S G ++ ELLTG+
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 24/201 (11%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVV---- 404
+G G+ G+ A + G V VK+L + + KR + ++ +L +KH+NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 405 ---PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
P R+ D L+ + + L+ ++ + + D+ + RGL +
Sbjct: 89 VFTPARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTD------DHVQFLIYQILRGLKY 140
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN-TTPPTRVAGYRAPEV-VETRK 519
+H S I+H ++K SN+ + D + + DFGL + T YRAPE+ +
Sbjct: 141 IH-SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 520 VTFKSDVYSFGVLLLELLTGK 540
D++S G ++ ELLTG+
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 95/229 (41%), Gaps = 30/229 (13%)
Query: 352 EVLGKGSVGT----SYKAVLEEGTTVVVKRLKEVAVGKRE----FEMQMEVLGKIKHDNV 403
E LG GS G + A + +V VK LK + + E F ++ + + H N+
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 404 VPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLH 463
+ L + K+ V + P GSL L +G R A+ A G+ +L
Sbjct: 74 IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLL----GTLSRYAVQVAEGMGYLE 128
Query: 464 VSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAGYR-------APEVVE 516
S + +H ++ A N+LL + DFGL + +R APE ++
Sbjct: 129 -SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLK 187
Query: 517 TRKVTFKSDVYSFGVLLLELLT-GKAPNQA--------SLGEEGIDLPR 556
TR + SD + FGV L E+ T G+ P + +EG LPR
Sbjct: 188 TRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR 236
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 86/202 (42%), Gaps = 16/202 (7%)
Query: 351 AEVLGKGSVGTSYKAV---LEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLR 407
+ LG+G+ G AV EE V + +K + ++ + + H+NVV
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 408 AFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGK 467
+ + L +Y G L + G + R G+ +LH G
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP-----DAQRFFHQLMAGVVYLHGIG- 124
Query: 468 IVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPP---TRVAG---YRAPEVVETRKVT 521
I H +IK N+LL + +SDFGL +F ++ G Y APE+++ R+
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 522 FKS-DVYSFGVLLLELLTGKAP 542
+ DV+S G++L +L G+ P
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELP 206
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 24/201 (11%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVV---- 404
+G G+ G+ A + G V VK+L + + KR + ++ +L +KH+NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 405 ---PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
P R+ D L+ + + L+ ++ + + D+ + RGL +
Sbjct: 89 VFTPARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTD------DHVQFLIYQILRGLKY 140
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN-TTPPTRVAGYRAPEV-VETRK 519
+H S I+H ++K SN+ + D + + DFGL + T YRAPE+ +
Sbjct: 141 IH-SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 520 VTFKSDVYSFGVLLLELLTGK 540
D++S G ++ ELLTG+
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 24/201 (11%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVV---- 404
+G G+ G+ A + G V VK+L + + KR + ++ +L +KH+NV+
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 99
Query: 405 ---PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
P R+ D L+ + + L+ ++ + + D+ + RGL +
Sbjct: 100 VFTPARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTD------DHVQFLIYQILRGLKY 151
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN-TTPPTRVAGYRAPEV-VETRK 519
+H S I+H ++K SN+ + D + + DFGL + T YRAPE+ +
Sbjct: 152 IH-SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMH 210
Query: 520 VTFKSDVYSFGVLLLELLTGK 540
D++S G ++ ELLTG+
Sbjct: 211 YNQTVDIWSVGCIMAELLTGR 231
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 89/204 (43%), Gaps = 22/204 (10%)
Query: 352 EVLGKGSVGTSYKAVLEE----GTTVVVKRLK-EVAVGKREFEMQM---EVLGKIKHDNV 403
++LGKG+ G K +L + G +K LK EV V K E + VL +H +
Sbjct: 154 KLLGKGTFG---KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 210
Query: 404 VPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRI-ALSAARGLAHL 462
L+ + + D V +Y G L H SR + ++R R L +L
Sbjct: 211 TALKYSFQTHDRLCFVMEYANGGEL--FFHLSRERVFS----EDRARFYGAEIVSALDYL 264
Query: 463 HVSGKIVHGNIKASNILLRPDHDACVSDFGL--NPLFGNTTPPTRVAG--YRAPEVVETR 518
H +V+ ++K N++L D ++DFGL + T T Y APEV+E
Sbjct: 265 HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDN 324
Query: 519 KVTFKSDVYSFGVLLLELLTGKAP 542
D + GV++ E++ G+ P
Sbjct: 325 DYGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 24/201 (11%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVV---- 404
+G G+ G+ A + G V VK+L + + KR + ++ +L +KH+NV+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 90
Query: 405 ---PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
P R+ D L+ + + L+ ++ + + D+ + RGL +
Sbjct: 91 VFTPARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTD------DHVQFLIYQILRGLKY 142
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN-TTPPTRVAGYRAPEV-VETRK 519
+H S I+H ++K SN+ + D + + DFGL + T YRAPE+ +
Sbjct: 143 IH-SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMH 201
Query: 520 VTFKSDVYSFGVLLLELLTGK 540
D++S G ++ ELLTG+
Sbjct: 202 YNQTVDIWSVGCIMAELLTGR 222
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 24/201 (11%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVV---- 404
+G G+ G+ A + G V VK+L + + KR + ++ +L +KH+NV+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 95
Query: 405 ---PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
P R+ D L+ + + L+ ++ + + D+ + RGL +
Sbjct: 96 VFTPARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTD------DHVQFLIYQILRGLKY 147
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN-TTPPTRVAGYRAPEV-VETRK 519
+H S I+H ++K SN+ + D + + DFGL + T YRAPE+ +
Sbjct: 148 IH-SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMH 206
Query: 520 VTFKSDVYSFGVLLLELLTGK 540
D++S G ++ ELLTG+
Sbjct: 207 YNQTVDIWSVGCIMAELLTGR 227
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 88/207 (42%), Gaps = 22/207 (10%)
Query: 352 EVLGKGSVGT----SYKAVLEEGTTVVVKRLKEVAVGKRE----FEMQMEVLGKIKHDNV 403
E LG GS G + A + +V VK LK + + E F ++ + + H N+
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 404 VPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLH 463
+ L + K+ V + P GSL L +G R A+ A G+ +L
Sbjct: 84 IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGH----FLLGTLSRYAVQVAEGMGYLE 138
Query: 464 VSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAGYR-------APEVVE 516
S + +H ++ A N+LL + DFGL + +R APE ++
Sbjct: 139 -SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLK 197
Query: 517 TRKVTFKSDVYSFGVLLLELLT-GKAP 542
TR + SD + FGV L E+ T G+ P
Sbjct: 198 TRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 24/201 (11%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVV---- 404
+G G+ G+ A + G V VK+L + + KR + ++ +L +KH+NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 405 ---PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
P R+ D L+ + + L+ ++ + + D+ + RGL +
Sbjct: 89 VFTPARSLEEFNDVYLVTH--LMGADLNNIVKXQKLTD------DHVQFLIYQILRGLKY 140
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN-TTPPTRVAGYRAPEV-VETRK 519
+H S I+H ++K SN+ + D + + DFGL + T YRAPE+ +
Sbjct: 141 IH-SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 520 VTFKSDVYSFGVLLLELLTGK 540
D++S G ++ ELLTG+
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 92/217 (42%), Gaps = 37/217 (17%)
Query: 352 EVLGKGSVGTSYKAVL------EEGTTVVVKRLKEVAVG--KREFEMQMEVLGKI-KHDN 402
+ LG G+ G +A + V VK LK A K +++++ + +H+N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 403 VVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHL 462
+V L L++ +Y G L L R R L+ D IA S A L
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFL---RRKSRV-LETDPAFAIANSTASTRDLL 167
Query: 463 HVSGKI------------VHGNIKASNILLRPDHDACVSDFGLNP---------LFGNTT 501
H S ++ +H ++ A N+LL H A + DFGL + GN
Sbjct: 168 HFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 227
Query: 502 PPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT 538
P + + APE + T +SDV+S+G+LL E+ +
Sbjct: 228 LPVK---WMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 24/201 (11%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVV---- 404
+G G+ G+ A + G V VK+L + + KR + ++ +L +KH+NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 405 ---PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
P R+ D L+ + + L+ ++ + + D+ + RGL +
Sbjct: 89 VFTPARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTD------DHVQFLIYQILRGLKY 140
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN-TTPPTRVAGYRAPEV-VETRK 519
+H S I+H ++K SN+ + D + + DFGL + T YRAPE+ +
Sbjct: 141 IH-SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 520 VTFKSDVYSFGVLLLELLTGK 540
D++S G ++ ELLTG+
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 24/201 (11%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVV---- 404
+G G+ G+ A + G V VK+L + + KR + ++ +L +KH+NV+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 93
Query: 405 ---PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
P R+ D L+ + + L+ ++ + + D+ + RGL +
Sbjct: 94 VFTPARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTD------DHVQFLIYQILRGLKY 145
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN-TTPPTRVAGYRAPEV-VETRK 519
+H S I+H ++K SN+ + D + + DFGL + T YRAPE+ +
Sbjct: 146 IH-SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMH 204
Query: 520 VTFKSDVYSFGVLLLELLTGK 540
D++S G ++ ELLTG+
Sbjct: 205 YNQTVDIWSVGCIMAELLTGR 225
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 112/251 (44%), Gaps = 46/251 (18%)
Query: 329 NKLVFFEGGVYSFDLE-DLLRASAE---VLGKGSVG-----TSYKAVLEEGTT--VVVKR 377
N+ + + Y +DL+ + R + E VLG G+ G T+Y + + G + V VK
Sbjct: 24 NEYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAY-GISKTGVSIQVAVKM 82
Query: 378 LKEVA-VGKREFEM-QMEVLGKI-KHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHG 434
LKE A +RE M +++++ ++ H+N+V L L+++Y G L L
Sbjct: 83 LKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRS 142
Query: 435 SRGS-GRTPLDWDNRMRI-----------------ALSAARGLAHLHVSGKIVHGNIKAS 476
R ++++N+ R+ A A+G+ L VH ++ A
Sbjct: 143 KREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS-CVHRDLAAR 201
Query: 477 NILLRPDHDACVSDFGL---------NPLFGNTTPPTRVAGYRAPEVVETRKVTFKSDVY 527
N+L+ + DFGL + GN P + + APE + T KSDV+
Sbjct: 202 NVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVK---WMAPESLFEGIYTIKSDVW 258
Query: 528 SFGVLLLELLT 538
S+G+LL E+ +
Sbjct: 259 SYGILLWEIFS 269
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 24/201 (11%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVV---- 404
+G G+ G+ A + G V VK+L + + KR + ++ +L +KH+NV+
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 87
Query: 405 ---PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
P R+ D L+ + + L+ ++ + + D+ + RGL +
Sbjct: 88 VFTPARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTD------DHVQFLIYQILRGLKY 139
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN-TTPPTRVAGYRAPEV-VETRK 519
+H S I+H ++K SN+ + D + + DFGL + T YRAPE+ +
Sbjct: 140 IH-SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMH 198
Query: 520 VTFKSDVYSFGVLLLELLTGK 540
D++S G ++ ELLTG+
Sbjct: 199 YNQTVDIWSVGCIMAELLTGR 219
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 89/204 (43%), Gaps = 22/204 (10%)
Query: 352 EVLGKGSVGTSYKAVLEE----GTTVVVKRLK-EVAVGKREFEMQM---EVLGKIKHDNV 403
++LGKG+ G K +L + G +K LK EV V K E + VL +H +
Sbjct: 157 KLLGKGTFG---KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 213
Query: 404 VPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRI-ALSAARGLAHL 462
L+ + + D V +Y G L H SR + ++R R L +L
Sbjct: 214 TALKYSFQTHDRLCFVMEYANGGEL--FFHLSRERVFS----EDRARFYGAEIVSALDYL 267
Query: 463 HVSGKIVHGNIKASNILLRPDHDACVSDFGL--NPLFGNTTPPTRVAG--YRAPEVVETR 518
H +V+ ++K N++L D ++DFGL + T T Y APEV+E
Sbjct: 268 HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDN 327
Query: 519 KVTFKSDVYSFGVLLLELLTGKAP 542
D + GV++ E++ G+ P
Sbjct: 328 DYGRAVDWWGLGVVMYEMMCGRLP 351
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 24/201 (11%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVV---- 404
+G G+ G+ A + G V VK+L + + KR + ++ +L +KH+NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 405 ---PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
P R+ D L+ + + L+ ++ + + D+ + RGL +
Sbjct: 89 VFTPARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTD------DHVQFLIYQILRGLKY 140
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN-TTPPTRVAGYRAPEV-VETRK 519
+H S I+H ++K SN+ + D + + DFGL + T YRAPE+ +
Sbjct: 141 IH-SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 520 VTFKSDVYSFGVLLLELLTGK 540
D++S G ++ ELLTG+
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 24/201 (11%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVV---- 404
+G G+ G+ A + G V VK+L + + KR + ++ +L +KH+NV+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 94
Query: 405 ---PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
P R+ D L+ + + L+ ++ + + D+ + RGL +
Sbjct: 95 VFTPARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTD------DHVQFLIYQILRGLKY 146
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN-TTPPTRVAGYRAPEV-VETRK 519
+H S I+H ++K SN+ + D + + DFGL + T YRAPE+ +
Sbjct: 147 IH-SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMH 205
Query: 520 VTFKSDVYSFGVLLLELLTGK 540
D++S G ++ ELLTG+
Sbjct: 206 YNQTVDIWSVGCIMAELLTGR 226
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 24/201 (11%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVV---- 404
+G G+ G+ A + G V VK+L + + KR + ++ +L +KH+NV+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 100
Query: 405 ---PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
P R+ D L+ + + L+ ++ + + D+ + RGL +
Sbjct: 101 VFTPARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTD------DHVQFLIYQILRGLKY 152
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN-TTPPTRVAGYRAPEV-VETRK 519
+H S I+H ++K SN+ + D + + DFGL + T YRAPE+ +
Sbjct: 153 IH-SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMH 211
Query: 520 VTFKSDVYSFGVLLLELLTGK 540
D++S G ++ ELLTG+
Sbjct: 212 YNQTVDIWSVGCIMAELLTGR 232
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 24/201 (11%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVV---- 404
+G G+ G+ A + G V VK+L + + KR + ++ +L +KH+NV+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 90
Query: 405 ---PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
P R+ D L+ + + L+ ++ + + D+ + RGL +
Sbjct: 91 VFTPARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTD------DHVQFLIYQILRGLKY 142
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN-TTPPTRVAGYRAPEV-VETRK 519
+H S I+H ++K SN+ + D + + DFGL + T YRAPE+ +
Sbjct: 143 IH-SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMH 201
Query: 520 VTFKSDVYSFGVLLLELLTGK 540
D++S G ++ ELLTG+
Sbjct: 202 YNQTVDIWSVGCIMAELLTGR 222
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 100/216 (46%), Gaps = 21/216 (9%)
Query: 339 YSFDLEDLLRASAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAVG--KREFEMQMEVL 395
+ + EDL+ E +G+G+ G + L + T V VK +E K +F + +L
Sbjct: 109 WVLNHEDLV--LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARIL 166
Query: 396 GKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALL--HGSRGSGRTPLDWDNRMRIAL 453
+ H N+V L K +V + + G L G+R +T L ++
Sbjct: 167 KQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLL------QMVG 220
Query: 454 SAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL-----NPLFGNTTPPTRV-A 507
AA G+ +L S +H ++ A N L+ + +SDFG+ + ++ + +V
Sbjct: 221 DAAAGMEYLE-SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPV 279
Query: 508 GYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAP 542
+ APE + + + +SDV+SFG+LL E + G +P
Sbjct: 280 KWTAPEALNYGRYSSESDVWSFGILLWETFSLGASP 315
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 24/201 (11%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVV---- 404
+G G+ G+ A + G V VK+L + + KR + ++ +L +KH+NV+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 90
Query: 405 ---PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
P R+ D L+ + + L+ ++ + + D+ + RGL +
Sbjct: 91 VFTPARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTD------DHVQFLIYQILRGLKY 142
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN-TTPPTRVAGYRAPEV-VETRK 519
+H S I+H ++K SN+ + D + + DFGL + T YRAPE+ +
Sbjct: 143 IH-SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMH 201
Query: 520 VTFKSDVYSFGVLLLELLTGK 540
D++S G ++ ELLTG+
Sbjct: 202 YNQTVDIWSVGCIMAELLTGR 222
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 94/201 (46%), Gaps = 24/201 (11%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVV---- 404
+G G+ G+ A + G V VK+L + + KR + ++ +L +KH+NV+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 84
Query: 405 ---PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
P R+ D L+ + + L+ ++ ++ + D+ + RGL +
Sbjct: 85 VFTPARSLEEFNDVYLVTH--LMGADLNNIVKCAKLTD------DHVQFLIYQILRGLKY 136
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN-TTPPTRVAGYRAPEV-VETRK 519
+H S I+H ++K SN+ + D + + DFGL + T YRAPE+ +
Sbjct: 137 IH-SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMH 195
Query: 520 VTFKSDVYSFGVLLLELLTGK 540
D++S G ++ ELLTG+
Sbjct: 196 YNQTVDIWSVGCIMAELLTGR 216
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 24/201 (11%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVV---- 404
+G G+ G+ A + G V VK+L + + KR + ++ +L +KH+NV+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 100
Query: 405 ---PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
P R+ D L+ + + L+ ++ + + D+ + RGL +
Sbjct: 101 VFTPARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTD------DHVQFLIYQILRGLKY 152
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN-TTPPTRVAGYRAPEV-VETRK 519
+H S I+H ++K SN+ + D + + DFGL + T YRAPE+ +
Sbjct: 153 IH-SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMH 211
Query: 520 VTFKSDVYSFGVLLLELLTGK 540
D++S G ++ ELLTG+
Sbjct: 212 YNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 24/201 (11%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVV---- 404
+G G+ G+ A + G V VK+L + + KR + ++ +L +KH+NV+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 100
Query: 405 ---PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
P R+ D L+ + + L+ ++ + + D+ + RGL +
Sbjct: 101 VFTPARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTD------DHVQFLIYQILRGLKY 152
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN-TTPPTRVAGYRAPEV-VETRK 519
+H S I+H ++K SN+ + D + + DFGL + T YRAPE+ +
Sbjct: 153 IH-SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMH 211
Query: 520 VTFKSDVYSFGVLLLELLTGK 540
D++S G ++ ELLTG+
Sbjct: 212 YNQTVDIWSVGCIMAELLTGR 232
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 93/210 (44%), Gaps = 30/210 (14%)
Query: 352 EVLGKGSVGTSYKAVLE-EGTTVVVKRLK---EVAVGKREFEMQMEVLGKIKHDNVVPLR 407
E +G G+ G A G V +K++ +V + ++++L KHDN++ ++
Sbjct: 61 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIK 120
Query: 408 AF------YYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
Y +V D M L ++H S+ PL ++ RGL +
Sbjct: 121 DILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQ-----PLTLEHVRYFLYQLLRGLKY 174
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGL----------NPLFGNTTPPTRVAGYRA 511
+H S +++H ++K SN+L+ + + + DFG+ + F TR YRA
Sbjct: 175 MH-SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATR--WYRA 231
Query: 512 PEV-VETRKVTFKSDVYSFGVLLLELLTGK 540
PE+ + + T D++S G + E+L +
Sbjct: 232 PELMLSLHEYTQAIDLWSVGCIFGEMLARR 261
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 89/200 (44%), Gaps = 16/200 (8%)
Query: 352 EVLGKGSVG-----TSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPL 406
E LG+GS G T YK + + ++L + + E ++ L ++H +++ L
Sbjct: 15 ETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKL 74
Query: 407 RAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSG 466
+ + ++V +Y ++ R + D R + A H H
Sbjct: 75 YDVITTPTDIVMVIEYAGGELFDYIVEKKRMTE----DEGRRFFQQIICAIEYCHRH--- 127
Query: 467 KIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG---YRAPEVVETRKVTF- 522
KIVH ++K N+LL + + ++DFGL+ + + G Y APEV+ +
Sbjct: 128 KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGP 187
Query: 523 KSDVYSFGVLLLELLTGKAP 542
+ DV+S G++L +L G+ P
Sbjct: 188 EVDVWSCGIVLYVMLVGRLP 207
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 97/221 (43%), Gaps = 16/221 (7%)
Query: 354 LGKGSVGTSYKAVLEE-----GTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRA 408
LGKG Y+ + VV K + K + ++ + + + +VV
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 409 FYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKI 468
F+ D +V + SL L H R + P + MR +G+ +LH + ++
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLEL-HKRRKAVTEP-EARYFMR---QTIQGVQYLH-NNRV 163
Query: 469 VHGNIKASNILLRPDHDACVSDFGL-NPLFGNTTPPTRVAG---YRAPEVVETRKVTFKS 524
+H ++K N+ L D D + DFGL + + + G Y APEV+ + +F+
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGHSFEV 223
Query: 525 DVYSFGVLLLELLTGKAPNQAS-LGEEGIDLPRWVQSVVRE 564
D++S G +L LL GK P + S L E I + + SV R
Sbjct: 224 DIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRH 264
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 24/201 (11%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVV---- 404
+G G+ G+ A + G V VK+L + + KR + ++ +L +KH+NV+
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 84
Query: 405 ---PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
P R+ D L+ + + L+ ++ + + D+ + RGL +
Sbjct: 85 VFTPARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTD------DHVQFLIYQILRGLKY 136
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN-TTPPTRVAGYRAPEV-VETRK 519
+H S I+H ++K SN+ + D + + DFGL + T YRAPE+ +
Sbjct: 137 IH-SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMH 195
Query: 520 VTFKSDVYSFGVLLLELLTGK 540
D++S G ++ ELLTG+
Sbjct: 196 YNQTVDIWSVGCIMAELLTGR 216
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 24/201 (11%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVV---- 404
+G G+ G+ A + G V VK+L + + KR + ++ +L +KH+NV+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 93
Query: 405 ---PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
P R+ D L+ + + L+ ++ + + D+ + RGL +
Sbjct: 94 VFTPARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTD------DHVQFLIYQILRGLKY 145
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN-TTPPTRVAGYRAPEV-VETRK 519
+H S I+H ++K SN+ + D + + DFGL + T YRAPE+ +
Sbjct: 146 IH-SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMH 204
Query: 520 VTFKSDVYSFGVLLLELLTGK 540
D++S G ++ ELLTG+
Sbjct: 205 YNQTVDIWSVGCIMAELLTGR 225
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 96/205 (46%), Gaps = 32/205 (15%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVV---- 404
+G G+ G+ A + G V VK+L + + KR + ++ +L +KH+NV+
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 111
Query: 405 ---PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
P R+ D L+ + + L+ ++ + + D+ + RGL +
Sbjct: 112 VFTPARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTD------DHVQFLIYQILRGLKY 163
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGL-----NPLFGNTTPPTRVAGYRAPEV-V 515
+H S I+H ++K SN+ + D + + DFGL + + G TR YRAPE+ +
Sbjct: 164 IH-SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVA--TR--WYRAPEIML 218
Query: 516 ETRKVTFKSDVYSFGVLLLELLTGK 540
D++S G ++ ELLTG+
Sbjct: 219 NWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 95/212 (44%), Gaps = 18/212 (8%)
Query: 342 DLEDLLRASAEVLGKGSVGTSYKAV-LEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKH 400
DLE ++ LG+G+ G K + G + VKR++ + + + M++ ++
Sbjct: 8 DLEPIME-----LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRT 62
Query: 401 DNVVPLRAFY---YSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAAR 457
+ FY + + + + + M SL G+T + D +IA+S +
Sbjct: 63 VDCPFTVTFYGALFREGDVWICMELMDT-SLDKFYKQVIDKGQT-IPEDILGKIAVSIVK 120
Query: 458 GLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG---YRAPEV 514
L HLH ++H ++K SN+L+ + DFG++ + AG Y APE
Sbjct: 121 ALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPER 180
Query: 515 V----ETRKVTFKSDVYSFGVLLLELLTGKAP 542
+ + + KSD++S G+ ++EL + P
Sbjct: 181 INPELNQKGYSVKSDIWSLGITMIELAILRFP 212
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 24/201 (11%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVV---- 404
+G G+ G+ A + G V VK+L + + KR + ++ +L +KH+NV+
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 85
Query: 405 ---PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
P R+ D L+ + + L+ ++ + + D+ + RGL +
Sbjct: 86 VFTPARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTD------DHVQFLIYQILRGLKY 137
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN-TTPPTRVAGYRAPEV-VETRK 519
+H S I+H ++K SN+ + D + + DFGL + T YRAPE+ +
Sbjct: 138 IH-SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMH 196
Query: 520 VTFKSDVYSFGVLLLELLTGK 540
D++S G ++ ELLTG+
Sbjct: 197 YNQTVDIWSVGCIMAELLTGR 217
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 24/201 (11%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVV---- 404
+G G+ G+ A + G V VK+L + + KR + ++ +L +KH+NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 405 ---PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
P R+ D L+ + + L+ ++ + + D+ + RGL +
Sbjct: 89 VFTPARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTD------DHVQFLIYQILRGLKY 140
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN-TTPPTRVAGYRAPEV-VETRK 519
+H S I+H ++K SN+ + D + + DFGL + T YRAPE+ +
Sbjct: 141 IH-SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 520 VTFKSDVYSFGVLLLELLTGK 540
D++S G ++ ELLTG+
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 24/201 (11%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVV---- 404
+G G+ G+ A + G V VK+L + + KR + ++ +L +KH+NV+
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 85
Query: 405 ---PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
P R+ D L+ + + L+ ++ + + D+ + RGL +
Sbjct: 86 VFTPARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTD------DHVQFLIYQILRGLKY 137
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN-TTPPTRVAGYRAPEV-VETRK 519
+H S I+H ++K SN+ + D + + DFGL + T YRAPE+ +
Sbjct: 138 IH-SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMH 196
Query: 520 VTFKSDVYSFGVLLLELLTGK 540
D++S G ++ ELLTG+
Sbjct: 197 YNQTVDIWSVGCIMAELLTGR 217
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 95/229 (41%), Gaps = 30/229 (13%)
Query: 352 EVLGKGSVGT----SYKAVLEEGTTVVVKRLKEVAVGKRE----FEMQMEVLGKIKHDNV 403
E LG GS G + A + +V VK LK + + E F ++ + + H N+
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 404 VPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLH 463
+ L + K+ V + P GSL L +G R A+ A G+ +L
Sbjct: 78 IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLL----GTLSRYAVQVAEGMGYLE 132
Query: 464 VSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAGYR-------APEVVE 516
S + +H ++ A N+LL + DFGL + +R APE ++
Sbjct: 133 -SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 191
Query: 517 TRKVTFKSDVYSFGVLLLELLT-GKAPNQA--------SLGEEGIDLPR 556
TR + SD + FGV L E+ T G+ P + +EG LPR
Sbjct: 192 TRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR 240
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 13/192 (6%)
Query: 357 GSVGTSYKAVLEEGTTVVVKRLK---EVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSK 413
GSV ++Y A L + V VK+L + + R ++ +L +KH+NV+ L +
Sbjct: 42 GSVCSAYDARLRQ--KVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPA 99
Query: 414 DEKLLVYDYMPAGSLSALLHGSRGS--GRTPLDWDNRMRIALSAARGLAHLHVSGKIVHG 471
+ D+ ++ L+ + L ++ + RGL ++H +G I+H
Sbjct: 100 TS---IEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHSAG-IIHR 155
Query: 472 NIKASNILLRPDHDACVSDFGL-NPLFGNTTPPTRVAGYRAPEV-VETRKVTFKSDVYSF 529
++K SN+ + D + + DFGL T YRAPE+ + D++S
Sbjct: 156 DLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 215
Query: 530 GVLLLELLTGKA 541
G ++ ELL GKA
Sbjct: 216 GCIMAELLQGKA 227
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 24/201 (11%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVV---- 404
+G G+ G+ A + G V VK+L + + KR + ++ +L +KH+NV+
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 111
Query: 405 ---PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
P R+ D L+ + + L+ ++ + + D+ + RGL +
Sbjct: 112 VFTPARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTD------DHVQFLIYQILRGLKY 163
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN-TTPPTRVAGYRAPEV-VETRK 519
+H S I+H ++K SN+ + D + + DFGL + T YRAPE+ +
Sbjct: 164 IH-SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMH 222
Query: 520 VTFKSDVYSFGVLLLELLTGK 540
D++S G ++ ELLTG+
Sbjct: 223 YNQTVDIWSVGCIMAELLTGR 243
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 24/201 (11%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVV---- 404
+G G+ G+ A + G V VK+L + + KR + ++ +L +KH+NV+
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 107
Query: 405 ---PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
P R+ D L+ + + L+ ++ + + D+ + RGL +
Sbjct: 108 VFTPARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTD------DHVQFLIYQILRGLKY 159
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN-TTPPTRVAGYRAPEV-VETRK 519
+H S I+H ++K SN+ + D + + DFGL + T YRAPE+ +
Sbjct: 160 IH-SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMH 218
Query: 520 VTFKSDVYSFGVLLLELLTGK 540
D++S G ++ ELLTG+
Sbjct: 219 YNQTVDIWSVGCIMAELLTGR 239
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 88/207 (42%), Gaps = 22/207 (10%)
Query: 352 EVLGKGSVGT----SYKAVLEEGTTVVVKRLKEVAVGKRE----FEMQMEVLGKIKHDNV 403
E LG GS G + A + +V VK LK + + E F ++ + + H N+
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 404 VPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLH 463
+ L + K+ V + P GSL L +G R A+ A G+ +L
Sbjct: 84 IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGH----FLLGTLSRYAVQVAEGMGYLE 138
Query: 464 VSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAGYR-------APEVVE 516
S + +H ++ A N+LL + DFGL + +R APE ++
Sbjct: 139 -SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 197
Query: 517 TRKVTFKSDVYSFGVLLLELLT-GKAP 542
TR + SD + FGV L E+ T G+ P
Sbjct: 198 TRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 24/201 (11%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVV---- 404
+G G+ G+ A + G V VK+L + + KR + ++ +L +KH+NV+
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 86
Query: 405 ---PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
P R+ D L+ + + L+ ++ + + D+ + RGL +
Sbjct: 87 VFTPARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTD------DHVQFLIYQILRGLKY 138
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN-TTPPTRVAGYRAPEV-VETRK 519
+H S I+H ++K SN+ + D + + DFGL + T YRAPE+ +
Sbjct: 139 IH-SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMH 197
Query: 520 VTFKSDVYSFGVLLLELLTGK 540
D++S G ++ ELLTG+
Sbjct: 198 YNQTVDIWSVGCIMAELLTGR 218
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 95/229 (41%), Gaps = 30/229 (13%)
Query: 352 EVLGKGSVGT----SYKAVLEEGTTVVVKRLKEVAVGKRE----FEMQMEVLGKIKHDNV 403
E LG GS G + A + +V VK LK + + E F ++ + + H N+
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 404 VPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLH 463
+ L + K+ V + P GSL L +G R A+ A G+ +L
Sbjct: 74 IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLL----GTLSRYAVQVAEGMGYLE 128
Query: 464 VSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAGYR-------APEVVE 516
S + +H ++ A N+LL + DFGL + +R APE ++
Sbjct: 129 -SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 187
Query: 517 TRKVTFKSDVYSFGVLLLELLT-GKAPNQA--------SLGEEGIDLPR 556
TR + SD + FGV L E+ T G+ P + +EG LPR
Sbjct: 188 TRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR 236
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 93/210 (44%), Gaps = 30/210 (14%)
Query: 352 EVLGKGSVGTSYKAVLE-EGTTVVVKRLK---EVAVGKREFEMQMEVLGKIKHDNVVPLR 407
E +G G+ G A G V +K++ +V + ++++L KHDN++ ++
Sbjct: 60 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIK 119
Query: 408 AF------YYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
Y +V D M L ++H S+ PL ++ RGL +
Sbjct: 120 DILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQ-----PLTLEHVRYFLYQLLRGLKY 173
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGL----------NPLFGNTTPPTRVAGYRA 511
+H S +++H ++K SN+L+ + + + DFG+ + F TR YRA
Sbjct: 174 MH-SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATR--WYRA 230
Query: 512 PEV-VETRKVTFKSDVYSFGVLLLELLTGK 540
PE+ + + T D++S G + E+L +
Sbjct: 231 PELMLSLHEYTQAIDLWSVGCIFGEMLARR 260
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 24/201 (11%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVV---- 404
+G G+ G+ A + G V VK+L + + KR + ++ +L +KH+NV+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 94
Query: 405 ---PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
P R+ D L+ + + L+ ++ + + D+ + RGL +
Sbjct: 95 VFTPARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTD------DHVQFLIYQILRGLKY 146
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN-TTPPTRVAGYRAPEV-VETRK 519
+H S I+H ++K SN+ + D + + DFGL + T YRAPE+ +
Sbjct: 147 IH-SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMH 205
Query: 520 VTFKSDVYSFGVLLLELLTGK 540
D++S G ++ ELLTG+
Sbjct: 206 YNQTVDIWSVGCIMAELLTGR 226
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 24/201 (11%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVV---- 404
+G G+ G+ A + G V VK+L + + KR + ++ +L +KH+NV+
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 98
Query: 405 ---PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
P R+ D L+ + + L+ ++ + + D+ + RGL +
Sbjct: 99 VFTPARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTD------DHVQFLIYQILRGLKY 150
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN-TTPPTRVAGYRAPEV-VETRK 519
+H S I+H ++K SN+ + D + + DFGL + T YRAPE+ +
Sbjct: 151 IH-SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMH 209
Query: 520 VTFKSDVYSFGVLLLELLTGK 540
D++S G ++ ELLTG+
Sbjct: 210 YNQTVDIWSVGCIMAELLTGR 230
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 24/201 (11%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVV---- 404
+G G+ G+ A + G V VK+L + + KR + ++ +L +KH+NV+
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 99
Query: 405 ---PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
P R+ D L+ + + L+ ++ + + D+ + RGL +
Sbjct: 100 VFTPARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTD------DHVQFLIYQILRGLKY 151
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN-TTPPTRVAGYRAPEV-VETRK 519
+H S I+H ++K SN+ + D + + DFGL + T YRAPE+ +
Sbjct: 152 IH-SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMH 210
Query: 520 VTFKSDVYSFGVLLLELLTGK 540
D++S G ++ ELLTG+
Sbjct: 211 YNQTVDIWSVGCIMAELLTGR 231
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 86/202 (42%), Gaps = 16/202 (7%)
Query: 351 AEVLGKGSVGTSYKAV---LEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLR 407
+ LG+G+ G AV EE V + +K + ++ + + H+NVV
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 408 AFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGK 467
+ + L +Y G L + G + R G+ +LH G
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP-----DAQRFFHQLMAGVVYLHGIG- 124
Query: 468 IVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPP---TRVAG---YRAPEVVETRKVT 521
I H +IK N+LL + +SDFGL +F ++ G Y APE+++ R+
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 522 FKS-DVYSFGVLLLELLTGKAP 542
+ DV+S G++L +L G+ P
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELP 206
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 95/229 (41%), Gaps = 30/229 (13%)
Query: 352 EVLGKGSVGT----SYKAVLEEGTTVVVKRLKEVAVGKRE----FEMQMEVLGKIKHDNV 403
E LG GS G + A + +V VK LK + + E F ++ + + H N+
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 404 VPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLH 463
+ L + K+ V + P GSL L +G R A+ A G+ +L
Sbjct: 74 IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLL----GTLSRYAVQVAEGMGYLE 128
Query: 464 VSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAGYR-------APEVVE 516
S + +H ++ A N+LL + DFGL + +R APE ++
Sbjct: 129 -SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 187
Query: 517 TRKVTFKSDVYSFGVLLLELLT-GKAPNQA--------SLGEEGIDLPR 556
TR + SD + FGV L E+ T G+ P + +EG LPR
Sbjct: 188 TRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR 236
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 24/201 (11%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVV---- 404
+G G+ G+ A + G V VK+L + + KR + ++ +L +KH+NV+
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 108
Query: 405 ---PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
P R+ D L+ + + L+ ++ + + D+ + RGL +
Sbjct: 109 VFTPARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTD------DHVQFLIYQILRGLKY 160
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN-TTPPTRVAGYRAPEV-VETRK 519
+H S I+H ++K SN+ + D + + DFGL + T YRAPE+ +
Sbjct: 161 IH-SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMH 219
Query: 520 VTFKSDVYSFGVLLLELLTGK 540
D++S G ++ ELLTG+
Sbjct: 220 YNQTVDIWSVGCIMAELLTGR 240
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 24/201 (11%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVV---- 404
+G G+ G+ A + G V VK+L + + KR + ++ +L +KH+NV+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 84
Query: 405 ---PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
P R+ D L+ + + L+ ++ + + D+ + RGL +
Sbjct: 85 VFTPARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTD------DHVQFLIYQILRGLKY 136
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN-TTPPTRVAGYRAPEV-VETRK 519
+H S I+H ++K SN+ + D + + DFGL + T YRAPE+ +
Sbjct: 137 IH-SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMH 195
Query: 520 VTFKSDVYSFGVLLLELLTGK 540
D++S G ++ ELLTG+
Sbjct: 196 YNQTVDIWSVGCIMAELLTGR 216
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 86/202 (42%), Gaps = 16/202 (7%)
Query: 351 AEVLGKGSVGTSYKAV---LEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLR 407
+ LG+G+ G AV EE V + +K + ++ + + H+NVV
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 408 AFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGK 467
+ + L +Y G L + G + R G+ +LH G
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP-----DAQRFFHQLMAGVVYLHGIG- 124
Query: 468 IVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPP---TRVAG---YRAPEVVETRKVT 521
I H +IK N+LL + +SDFGL +F ++ G Y APE+++ R+
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 522 FKS-DVYSFGVLLLELLTGKAP 542
+ DV+S G++L +L G+ P
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELP 206
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 24/201 (11%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVV---- 404
+G G+ G+ A + G V VK+L + + KR + ++ +L +KH+NV+
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 108
Query: 405 ---PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
P R+ D L+ + + L+ ++ + + D+ + RGL +
Sbjct: 109 VFTPARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTD------DHVQFLIYQILRGLKY 160
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN-TTPPTRVAGYRAPEV-VETRK 519
+H S I+H ++K SN+ + D + + DFGL + T YRAPE+ +
Sbjct: 161 IH-SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMH 219
Query: 520 VTFKSDVYSFGVLLLELLTGK 540
D++S G ++ ELLTG+
Sbjct: 220 YNQTVDIWSVGCIMAELLTGR 240
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 24/201 (11%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVV---- 404
+G G+ G+ A + G V VK+L + + KR + ++ +L +KH+NV+
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 94
Query: 405 ---PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
P R+ D L+ + + L+ ++ + + D+ + RGL +
Sbjct: 95 VFTPARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTD------DHVQFLIYQILRGLKY 146
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN-TTPPTRVAGYRAPEV-VETRK 519
+H S I+H ++K SN+ + D + + DFGL + T YRAPE+ +
Sbjct: 147 IH-SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMH 205
Query: 520 VTFKSDVYSFGVLLLELLTGK 540
D++S G ++ ELLTG+
Sbjct: 206 YNQTVDIWSVGCIMAELLTGR 226
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 97/221 (43%), Gaps = 16/221 (7%)
Query: 354 LGKGSVGTSYKAVLEE-----GTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRA 408
LGKG Y+ + VV K + K + ++ + + + +VV
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 409 FYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKI 468
F+ D +V + SL L H R + P + MR +G+ +LH + ++
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLEL-HKRRKAVTEP-EARYFMR---QTIQGVQYLH-NNRV 163
Query: 469 VHGNIKASNILLRPDHDACVSDFGL-NPLFGNTTPPTRVAG---YRAPEVVETRKVTFKS 524
+H ++K N+ L D D + DFGL + + + G Y APEV+ + +F+
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEV 223
Query: 525 DVYSFGVLLLELLTGKAPNQAS-LGEEGIDLPRWVQSVVRE 564
D++S G +L LL GK P + S L E I + + SV R
Sbjct: 224 DIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRH 264
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 96/205 (46%), Gaps = 32/205 (15%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVV---- 404
+G G+ G+ A + G V VK+L + + KR + ++ +L +KH+NV+
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 108
Query: 405 ---PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
P R+ D L+ + + L+ ++ + + D+ + RGL +
Sbjct: 109 VFTPARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTD------DHVQFLIYQILRGLKY 160
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGL-----NPLFGNTTPPTRVAGYRAPEV-V 515
+H S I+H ++K SN+ + D + + DFGL + + G TR YRAPE+ +
Sbjct: 161 IH-SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVA--TR--WYRAPEIML 215
Query: 516 ETRKVTFKSDVYSFGVLLLELLTGK 540
D++S G ++ ELLTG+
Sbjct: 216 NWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 24/201 (11%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVV---- 404
+G G+ G+ A + G V VK+L + + KR + ++ +L +KH+NV+
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 107
Query: 405 ---PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
P R+ D L+ + + L+ ++ + + D+ + RGL +
Sbjct: 108 VFTPARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTD------DHVQFLIYQILRGLKY 159
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN-TTPPTRVAGYRAPEV-VETRK 519
+H S I+H ++K SN+ + D + + DFGL + T YRAPE+ +
Sbjct: 160 IH-SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMH 218
Query: 520 VTFKSDVYSFGVLLLELLTGK 540
D++S G ++ ELLTG+
Sbjct: 219 YNQTVDIWSVGCIMAELLTGR 239
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 88/204 (43%), Gaps = 23/204 (11%)
Query: 352 EVLGKGSVGTSYKAVL----EEGTTVVVKRL-KEVAVGKREFE---MQMEVLGKIKHDNV 403
++LGKG+ G K +L G +K L KEV + K E + VL +H +
Sbjct: 14 KLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 70
Query: 404 VPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRI-ALSAARGLAHL 462
L+ + + D V +Y G L H SR T + R R L +L
Sbjct: 71 TALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFT----EERARFYGAEIVSALEYL 124
Query: 463 HVSGKIVHGNIKASNILLRPDHDACVSDFGL--NPLFGNTTPPTRVAG--YRAPEVVETR 518
H S +V+ +IK N++L D ++DFGL + T T Y APEV+E
Sbjct: 125 H-SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDN 183
Query: 519 KVTFKSDVYSFGVLLLELLTGKAP 542
D + GV++ E++ G+ P
Sbjct: 184 DYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 18/204 (8%)
Query: 353 VLGKGSVGTSYKAVL----EEGTTVVVKRLKEVAVG--KREFEMQMEVLGKIKHDNVVPL 406
+G+G G ++ + V +K K + +F + + + H ++V L
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 407 RAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSG 466
+++ ++ + G L + L + S LD + + A + LA+L S
Sbjct: 77 IGVI-TENPVWIIMELCTLGELRSFLQVRKFS----LDLASLILYAYQLSTALAYLE-SK 130
Query: 467 KIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVT 521
+ VH +I A N+L+ + + DFGL+ ++T G + APE + R+ T
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRRFT 190
Query: 522 FKSDVYSFGVLLLELLT-GKAPNQ 544
SDV+ FGV + E+L G P Q
Sbjct: 191 SASDVWMFGVCMWEILMHGVKPFQ 214
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 97/223 (43%), Gaps = 15/223 (6%)
Query: 332 VFFEGGVYSFDLE-DLLRASAEVLGKGSVGTSYKAV-LEEGTTVVVKRLKEVAVGKREFE 389
++F+G +F+++ D L E LG+G+ G K + G VKR++ V +E +
Sbjct: 20 LYFQGAXENFEVKADDLEPIXE-LGRGAYGVVEKXRHVPSGQIXAVKRIR-ATVNSQEQK 77
Query: 390 MQMEVLGKIKHDNVVPLRAFYYS---KDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWD 446
+ L P +Y ++ + + + SL G+T + D
Sbjct: 78 RLLXDLDISXRTVDCPFTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQT-IPED 136
Query: 447 NRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRV 506
+IA+S + L HLH ++H ++K SN+L+ DFG++ +
Sbjct: 137 ILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDID 196
Query: 507 AG---YRAPEVV----ETRKVTFKSDVYSFGVLLLELLTGKAP 542
AG Y APE + + + KSD++S G+ +EL + P
Sbjct: 197 AGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFP 239
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 88/204 (43%), Gaps = 23/204 (11%)
Query: 352 EVLGKGSVGTSYKAVL----EEGTTVVVKRL-KEVAVGKREFE---MQMEVLGKIKHDNV 403
++LGKG+ G K +L G +K L KEV + K E + VL +H +
Sbjct: 11 KLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 404 VPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRI-ALSAARGLAHL 462
L+ + + D V +Y G L H SR T + R R L +L
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFT----EERARFYGAEIVSALEYL 121
Query: 463 HVSGKIVHGNIKASNILLRPDHDACVSDFGL--NPLFGNTTPPTRVAG--YRAPEVVETR 518
H S +V+ +IK N++L D ++DFGL + T T Y APEV+E
Sbjct: 122 H-SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDN 180
Query: 519 KVTFKSDVYSFGVLLLELLTGKAP 542
D + GV++ E++ G+ P
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 88/204 (43%), Gaps = 23/204 (11%)
Query: 352 EVLGKGSVGTSYKAVL----EEGTTVVVKRL-KEVAVGKREFE---MQMEVLGKIKHDNV 403
++LGKG+ G K +L G +K L KEV + K E + VL +H +
Sbjct: 11 KLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 404 VPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRI-ALSAARGLAHL 462
L+ + + D V +Y G L H SR T + R R L +L
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFT----EERARFYGAEIVSALEYL 121
Query: 463 HVSGKIVHGNIKASNILLRPDHDACVSDFGL--NPLFGNTTPPTRVAG--YRAPEVVETR 518
H S +V+ +IK N++L D ++DFGL + T T Y APEV+E
Sbjct: 122 H-SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDN 180
Query: 519 KVTFKSDVYSFGVLLLELLTGKAP 542
D + GV++ E++ G+ P
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 16/201 (7%)
Query: 351 AEVLGKGSVGTSYKAV-LEEGTTVVVKRLKEVAVGKRE----FEMQMEVLGKIKHDNVVP 405
+ LG+GS G A G V +K + + + K + E ++ L ++H +++
Sbjct: 18 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 77
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
L SKDE ++V +Y ++ + S + R + +A H H
Sbjct: 78 LYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEA----RRFFQQIISAVEYCHRH-- 131
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG---YRAPEVVETRKVTF 522
KIVH ++K N+LL + ++DFGL+ + + G Y APEV+ +
Sbjct: 132 -KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAG 190
Query: 523 -KSDVYSFGVLLLELLTGKAP 542
+ DV+S GV+L +L + P
Sbjct: 191 PEVDVWSCGVILYVMLCRRLP 211
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 16/201 (7%)
Query: 351 AEVLGKGSVGTSYKAV-LEEGTTVVVKRLKEVAVGKRE----FEMQMEVLGKIKHDNVVP 405
+ LG+GS G A G V +K + + + K + E ++ L ++H +++
Sbjct: 19 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 78
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
L SKDE ++V +Y ++ + S + R + +A H H
Sbjct: 79 LYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEA----RRFFQQIISAVEYCHRH-- 132
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG---YRAPEVVETRKVTF 522
KIVH ++K N+LL + ++DFGL+ + + G Y APEV+ +
Sbjct: 133 -KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAG 191
Query: 523 -KSDVYSFGVLLLELLTGKAP 542
+ DV+S GV+L +L + P
Sbjct: 192 PEVDVWSCGVILYVMLCRRLP 212
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 94/202 (46%), Gaps = 19/202 (9%)
Query: 354 LGKGSVGTSYKAVLEE-GTTVVVKRLKEVAVGK--REFEMQMEVLGKIKHDNVVPLRAF- 409
+G G+ G +K + G + VK+++ + + M ++V+ K HD ++ F
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLK-SHDCPYIVQCFG 91
Query: 410 -YYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKI 468
+ + + + + M G+ + L R G P +M +A+ A L +L +
Sbjct: 92 TFITNTDVFIAMELM--GTCAEKLK-KRMQGPIPERILGKMTVAIVKA--LYYLKEKHGV 146
Query: 469 VHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG---YRAPEVVETRKVT---- 521
+H ++K SNILL + DFG++ + R AG Y APE ++ T
Sbjct: 147 IHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDY 206
Query: 522 -FKSDVYSFGVLLLELLTGKAP 542
++DV+S G+ L+EL TG+ P
Sbjct: 207 DIRADVWSLGISLVELATGQFP 228
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 103/235 (43%), Gaps = 30/235 (12%)
Query: 339 YSFDLEDLLRASAEVLGKGS---VGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVL 395
+S ED+ + +VLG+G+ V T + + V + + + R F ++E+L
Sbjct: 6 FSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFR-EVEML 64
Query: 396 GKIK-HDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALS 454
+ + H NV+ L F+ +D LV++ M GS+ + +H R +
Sbjct: 65 YQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNEL-----EASVVVQD 119
Query: 455 AARGLAHLHVSGKIVHGNIKASNILLRPDHDAC---VSDFGLN---PLFGNTTP------ 502
A L LH G I H ++K NIL + + DF L L G+ +P
Sbjct: 120 VASALDFLHNKG-IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPEL 178
Query: 503 --PTRVAGYRAPEVVE--TRKVTF---KSDVYSFGVLLLELLTGKAPNQASLGEE 550
P A Y APEVVE + + + + D++S GV+L LL+G P G +
Sbjct: 179 LTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSD 233
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 87/204 (42%), Gaps = 23/204 (11%)
Query: 352 EVLGKGSVGTSYKAVL----EEGTTVVVKRL-KEVAVGKREFE---MQMEVLGKIKHDNV 403
++LGKG+ G K +L G +K L KEV + K E + VL +H +
Sbjct: 11 KLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 404 VPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRI-ALSAARGLAHL 462
L+ + + D V +Y G L H SR T + R R L +L
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFT----EERARFYGAEIVSALEYL 121
Query: 463 HVSGKIVHGNIKASNILLRPDHDACVSDFGL-NPLFGNTTPPTRVAG---YRAPEVVETR 518
H S +V+ +IK N++L D ++DFGL + G Y APEV+E
Sbjct: 122 H-SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDN 180
Query: 519 KVTFKSDVYSFGVLLLELLTGKAP 542
D + GV++ E++ G+ P
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 91/202 (45%), Gaps = 25/202 (12%)
Query: 354 LGKGSVGTSYKAVLEE-GTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYS 412
LG+GS G ++ ++ G VK+++ + V + E ++ + +VPL
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVR-LEVFRVE---ELVACAGLSSPRIVPLYGAVRE 135
Query: 413 KDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGN 472
+ + + GSL L+ + G P D + A GL +LH +I+HG+
Sbjct: 136 GPWVNIFMELLEGGSLGQLI---KQMGCLPED--RALYYLGQALEGLEYLHTR-RILHGD 189
Query: 473 IKASNILLRPDHD-ACVSDFG----LNP-------LFGNTTPPTRVAGYRAPEVVETRKV 520
+KA N+LL D A + DFG L P L G+ P T + APEVV +
Sbjct: 190 VKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTET--HMAPEVVMGKPC 247
Query: 521 TFKSDVYSFGVLLLELLTGKAP 542
K D++S ++L +L G P
Sbjct: 248 DAKVDIWSSCCMMLHMLNGCHP 269
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 16/201 (7%)
Query: 351 AEVLGKGSVGTSYKAV-LEEGTTVVVKRLKEVAVGKRE----FEMQMEVLGKIKHDNVVP 405
+ LG+GS G A G V +K + + + K + E ++ L ++H +++
Sbjct: 13 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 72
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
L SKDE ++V +Y ++ + S + R + +A H H
Sbjct: 73 LYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEA----RRFFQQIISAVEYCHRH-- 126
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG---YRAPEVVETRKVTF 522
KIVH ++K N+LL + ++DFGL+ + + G Y APEV+ +
Sbjct: 127 -KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAG 185
Query: 523 -KSDVYSFGVLLLELLTGKAP 542
+ DV+S GV+L +L + P
Sbjct: 186 PEVDVWSCGVILYVMLCRRLP 206
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 13/132 (9%)
Query: 418 LVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASN 477
+V +Y+ +L ++H P+ + + A + L H +G I+H ++K +N
Sbjct: 93 IVMEYVDGVTLRDIVHT-----EGPMTPKRAIEVIADACQALNFSHQNG-IIHRDVKPAN 146
Query: 478 ILLRPDHDACVSDFGLNPLF---GNTTPPTRV----AGYRAPEVVETRKVTFKSDVYSFG 530
IL+ + V DFG+ GN+ T A Y +PE V +SDVYS G
Sbjct: 147 ILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLG 206
Query: 531 VLLLELLTGKAP 542
+L E+LTG+ P
Sbjct: 207 CVLYEVLTGEPP 218
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 87/204 (42%), Gaps = 23/204 (11%)
Query: 352 EVLGKGSVGTSYKAVL----EEGTTVVVKRL-KEVAVGKREFE---MQMEVLGKIKHDNV 403
++LGKG+ G K +L G +K L KEV + K E + VL +H +
Sbjct: 16 KLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 72
Query: 404 VPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRI-ALSAARGLAHL 462
L+ + + D V +Y G L H SR T + R R L +L
Sbjct: 73 TALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFT----EERARFYGAEIVSALEYL 126
Query: 463 HVSGKIVHGNIKASNILLRPDHDACVSDFGL-NPLFGNTTPPTRVAG---YRAPEVVETR 518
H S +V+ +IK N++L D ++DFGL + G Y APEV+E
Sbjct: 127 H-SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDN 185
Query: 519 KVTFKSDVYSFGVLLLELLTGKAP 542
D + GV++ E++ G+ P
Sbjct: 186 DYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 88/204 (43%), Gaps = 22/204 (10%)
Query: 352 EVLGKGSVGTSYKAVLEE----GTTVVVKRLK-EVAVGKREFEMQM---EVLGKIKHDNV 403
++LGKG+ G K +L + G +K LK EV V K E + VL +H +
Sbjct: 14 KLLGKGTFG---KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 70
Query: 404 VPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRI-ALSAARGLAHL 462
L+ + + D V +Y G L H SR + ++R R L +L
Sbjct: 71 TALKYSFQTHDRLCFVMEYANGGEL--FFHLSRERVFS----EDRARFYGAEIVSALDYL 124
Query: 463 HVSGKIVHGNIKASNILLRPDHDACVSDFGL-NPLFGNTTPPTRVAG---YRAPEVVETR 518
H +V+ ++K N++L D ++DFGL + G Y APEV+E
Sbjct: 125 HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDN 184
Query: 519 KVTFKSDVYSFGVLLLELLTGKAP 542
D + GV++ E++ G+ P
Sbjct: 185 DYGRAVDWWGLGVVMYEMMCGRLP 208
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 13/192 (6%)
Query: 357 GSVGTSYKAVLEEGTTVVVKRLK---EVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSK 413
GSV ++Y A L + V VK+L + + R ++ +L +KH+NV+ L +
Sbjct: 42 GSVCSAYDARLRQ--KVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPA 99
Query: 414 DEKLLVYDYMPAGSLSALLHGSRGS--GRTPLDWDNRMRIALSAARGLAHLHVSGKIVHG 471
+ D+ ++ L+ + L ++ + RGL ++H +G I+H
Sbjct: 100 TS---IEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAG-IIHR 155
Query: 472 NIKASNILLRPDHDACVSDFGL-NPLFGNTTPPTRVAGYRAPEV-VETRKVTFKSDVYSF 529
++K SN+ + D + + DFGL T YRAPE+ + D++S
Sbjct: 156 DLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 215
Query: 530 GVLLLELLTGKA 541
G ++ ELL GKA
Sbjct: 216 GCIMAELLQGKA 227
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 16/201 (7%)
Query: 351 AEVLGKGSVGTSYKAV-LEEGTTVVVKRLKEVAVGKRE----FEMQMEVLGKIKHDNVVP 405
+ LG+GS G A G V +K + + + K + E ++ L ++H +++
Sbjct: 9 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 68
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
L SKDE ++V +Y ++ + S + R + +A H H
Sbjct: 69 LYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEA----RRFFQQIISAVEYCHRH-- 122
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG---YRAPEVVETRKVTF 522
KIVH ++K N+LL + ++DFGL+ + + G Y APEV+ +
Sbjct: 123 -KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAG 181
Query: 523 -KSDVYSFGVLLLELLTGKAP 542
+ DV+S GV+L +L + P
Sbjct: 182 PEVDVWSCGVILYVMLCRRLP 202
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 100/229 (43%), Gaps = 22/229 (9%)
Query: 332 VFFEGGVYS----FDLEDLLRASAEVLGKGSVGTSYKAVL----EEGTTVVVKRLKEVAV 383
++F+G + S ++++ +G+G G ++ + V +K K
Sbjct: 20 LYFQGAMGSSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTS 79
Query: 384 G--KREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRT 441
+ +F + + + H ++V L +++ ++ + G L + L + S
Sbjct: 80 DSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYS--- 135
Query: 442 PLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTT 501
LD + + A + LA+L S + VH +I A N+L+ + + DFGL+ ++T
Sbjct: 136 -LDLASLILYAYQLSTALAYLE-SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 193
Query: 502 PPTRVAG-----YRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQ 544
G + APE + R+ T SDV+ FGV + E+L G P Q
Sbjct: 194 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 242
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 88/204 (43%), Gaps = 22/204 (10%)
Query: 352 EVLGKGSVGTSYKAVLEE----GTTVVVKRLK-EVAVGKREFEMQM---EVLGKIKHDNV 403
++LGKG+ G K +L + G +K LK EV V K E + VL +H +
Sbjct: 16 KLLGKGTFG---KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 72
Query: 404 VPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRI-ALSAARGLAHL 462
L+ + + D V +Y G L H SR + ++R R L +L
Sbjct: 73 TALKYSFQTHDRLCFVMEYANGGEL--FFHLSRERVFS----EDRARFYGAEIVSALDYL 126
Query: 463 HVSGKIVHGNIKASNILLRPDHDACVSDFGL-NPLFGNTTPPTRVAG---YRAPEVVETR 518
H +V+ ++K N++L D ++DFGL + G Y APEV+E
Sbjct: 127 HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDN 186
Query: 519 KVTFKSDVYSFGVLLLELLTGKAP 542
D + GV++ E++ G+ P
Sbjct: 187 DYGRAVDWWGLGVVMYEMMCGRLP 210
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 68/146 (46%), Gaps = 15/146 (10%)
Query: 403 VVPLRAFYYSKDEKLLVYDYMPAGSLSALL--HGSRGSGRTPLDWDNRMRIALSAARGLA 460
+V + +++ D+ + D M G L L HG D R A GL
Sbjct: 254 IVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA------DMRF-YAAEIILGLE 306
Query: 461 HLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVA--GYRAPEVVETR 518
H+H + +V+ ++K +NILL +SD GL F P V GY APEV++ +
Sbjct: 307 HMH-NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQ-K 364
Query: 519 KVTFKS--DVYSFGVLLLELLTGKAP 542
V + S D +S G +L +LL G +P
Sbjct: 365 GVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 68/146 (46%), Gaps = 15/146 (10%)
Query: 403 VVPLRAFYYSKDEKLLVYDYMPAGSLSALL--HGSRGSGRTPLDWDNRMRIALSAARGLA 460
+V + +++ D+ + D M G L L HG D R A GL
Sbjct: 254 IVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA------DMRF-YAAEIILGLE 306
Query: 461 HLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVA--GYRAPEVVETR 518
H+H + +V+ ++K +NILL +SD GL F P V GY APEV++ +
Sbjct: 307 HMH-NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQ-K 364
Query: 519 KVTFKS--DVYSFGVLLLELLTGKAP 542
V + S D +S G +L +LL G +P
Sbjct: 365 GVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 88/204 (43%), Gaps = 22/204 (10%)
Query: 352 EVLGKGSVGTSYKAVLEE----GTTVVVKRLK-EVAVGKREFEMQM---EVLGKIKHDNV 403
++LGKG+ G K +L + G +K LK EV V K E + VL +H +
Sbjct: 15 KLLGKGTFG---KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 71
Query: 404 VPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRI-ALSAARGLAHL 462
L+ + + D V +Y G L H SR + ++R R L +L
Sbjct: 72 TALKYSFQTHDRLCFVMEYANGGEL--FFHLSRERVFS----EDRARFYGAEIVSALDYL 125
Query: 463 HVSGKIVHGNIKASNILLRPDHDACVSDFGL-NPLFGNTTPPTRVAG---YRAPEVVETR 518
H +V+ ++K N++L D ++DFGL + G Y APEV+E
Sbjct: 126 HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDN 185
Query: 519 KVTFKSDVYSFGVLLLELLTGKAP 542
D + GV++ E++ G+ P
Sbjct: 186 DYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 92/214 (42%), Gaps = 31/214 (14%)
Query: 352 EVLGKGSVGTSYKAVL------EEGTTVVVKRLKEVAVG--KREFEMQMEVLGKI-KHDN 402
+ LG G+ G +A + V VK LK A K +++++ + +H+N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 403 VVPLRAFYYSKDEKLLVYDYMPAGSLSALLH-GSR--------GSGRTPLDWDNRMRIAL 453
+V L L++ +Y G L L SR + L + + +
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSS 171
Query: 454 SAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNP---------LFGNTTPPT 504
A+G+A L S +H ++ A N+LL H A + DFGL + GN P
Sbjct: 172 QVAQGMAFL-ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 230
Query: 505 RVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT 538
+ + APE + T +SDV+S+G+LL E+ +
Sbjct: 231 K---WMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 68/146 (46%), Gaps = 15/146 (10%)
Query: 403 VVPLRAFYYSKDEKLLVYDYMPAGSLSALL--HGSRGSGRTPLDWDNRMRIALSAARGLA 460
+V + +++ D+ + D M G L L HG D R A GL
Sbjct: 253 IVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA------DMRF-YAAEIILGLE 305
Query: 461 HLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVA--GYRAPEVVETR 518
H+H + +V+ ++K +NILL +SD GL F P V GY APEV++ +
Sbjct: 306 HMH-NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQ-K 363
Query: 519 KVTFKS--DVYSFGVLLLELLTGKAP 542
V + S D +S G +L +LL G +P
Sbjct: 364 GVAYDSSADWFSLGCMLFKLLRGHSP 389
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 13/192 (6%)
Query: 357 GSVGTSYKAVLEEGTTVVVKRLK---EVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSK 413
GSV ++Y A L + V VK+L + + R ++ +L +KH+NV+ L +
Sbjct: 34 GSVCSAYDARLRQ--KVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPA 91
Query: 414 DEKLLVYDYMPAGSLSALLHGSRGS--GRTPLDWDNRMRIALSAARGLAHLHVSGKIVHG 471
+ D+ ++ L+ + L ++ + RGL ++H +G I+H
Sbjct: 92 TS---IEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAG-IIHR 147
Query: 472 NIKASNILLRPDHDACVSDFGL-NPLFGNTTPPTRVAGYRAPEV-VETRKVTFKSDVYSF 529
++K SN+ + D + + DFGL T YRAPE+ + D++S
Sbjct: 148 DLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 207
Query: 530 GVLLLELLTGKA 541
G ++ ELL GKA
Sbjct: 208 GCIMAELLQGKA 219
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 93/207 (44%), Gaps = 17/207 (8%)
Query: 354 LGKGSVGTSYKAVLE-EGTTVVVKRLKEVAVGKREFEM---QMEVLGKIKHDNVVPL--R 407
+G GS G K + +G +V K L ++ + E +M ++ +L ++KH N+V R
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 408 AFYYSKDEKLLVYDYMPAGSLSALLHGSRGSG-RTPLDWDNRMRIALSAARGLAHLHVSG 466
+ +V +Y G L++++ ++G+ R LD + +R+ L H
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVI--TKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131
Query: 467 K----IVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRV----AGYRAPEVVETR 518
++H ++K +N+ L + + DFGL + + T + Y +PE +
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRM 191
Query: 519 KVTFKSDVYSFGVLLLELLTGKAPNQA 545
KSD++S G LL EL P A
Sbjct: 192 SYNEKSDIWSLGCLLYELCALMPPFTA 218
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 87/204 (42%), Gaps = 23/204 (11%)
Query: 352 EVLGKGSVGTSYKAVL----EEGTTVVVKRL-KEVAVGKREFE---MQMEVLGKIKHDNV 403
++LGKG+ G K +L G +K L KEV + K E + VL +H +
Sbjct: 11 KLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 404 VPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRI-ALSAARGLAHL 462
L+ + + D V +Y G L H SR T + R R L +L
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFT----EERARFYGAEIVSALEYL 121
Query: 463 HVSGKIVHGNIKASNILLRPDHDACVSDFGL-NPLFGNTTPPTRVAG---YRAPEVVETR 518
H S +V+ +IK N++L D ++DFGL + G Y APEV+E
Sbjct: 122 H-SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDN 180
Query: 519 KVTFKSDVYSFGVLLLELLTGKAP 542
D + GV++ E++ G+ P
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 93/207 (44%), Gaps = 17/207 (8%)
Query: 354 LGKGSVGTSYKAVLE-EGTTVVVKRLKEVAVGKREFEM---QMEVLGKIKHDNVVPL--R 407
+G GS G K + +G +V K L ++ + E +M ++ +L ++KH N+V R
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 408 AFYYSKDEKLLVYDYMPAGSLSALLHGSRGSG-RTPLDWDNRMRIALSAARGLAHLHVSG 466
+ +V +Y G L++++ ++G+ R LD + +R+ L H
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVI--TKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131
Query: 467 K----IVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTR----VAGYRAPEVVETR 518
++H ++K +N+ L + + DFGL + + T + Y +PE +
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRM 191
Query: 519 KVTFKSDVYSFGVLLLELLTGKAPNQA 545
KSD++S G LL EL P A
Sbjct: 192 SYNEKSDIWSLGCLLYELCALMPPFTA 218
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 15/184 (8%)
Query: 369 EGTTVVVKRLK--EVAVGK-REFEMQMEVLGKIKHDNVVPLRAFYYS--KDEKLLVYDYM 423
+G +VVK LK + + K R+F + L H NV+P+ S L+ +M
Sbjct: 32 QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWM 91
Query: 424 PAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGN-IKASNILLRP 482
P GSL +LH G+ +D ++ AL ARG+A LH ++ + + + ++++
Sbjct: 92 PYGSLYNVLH--EGTNFV-VDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDE 148
Query: 483 DHDACVSDFGLNPLFGNTTPPTRVA-GYRAPEVVETRKVTF---KSDVYSFGVLLLELLT 538
D A +S + F +P A + APE ++ + +D++SF VLL EL+T
Sbjct: 149 DMTARISMADVK--FSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVT 206
Query: 539 GKAP 542
+ P
Sbjct: 207 REVP 210
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 68/146 (46%), Gaps = 15/146 (10%)
Query: 403 VVPLRAFYYSKDEKLLVYDYMPAGSLSALL--HGSRGSGRTPLDWDNRMRIALSAARGLA 460
+V + +++ D+ + D M G L L HG D R A GL
Sbjct: 254 IVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA------DMRF-YAAEIILGLE 306
Query: 461 HLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVA--GYRAPEVVETR 518
H+H + +V+ ++K +NILL +SD GL F P V GY APEV++ +
Sbjct: 307 HMH-NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQ-K 364
Query: 519 KVTFKS--DVYSFGVLLLELLTGKAP 542
V + S D +S G +L +LL G +P
Sbjct: 365 GVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 24/201 (11%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVV---- 404
+G G+ G+ A + G V VK+L + + KR + ++ +L +KH+NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 405 ---PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
P R+ D L+ + + L+ ++ + + D+ + RGL +
Sbjct: 89 VFTPARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTD------DHVQFLIYQILRGLKY 140
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN-TTPPTRVAGYRAPEV-VETRK 519
+H S I+H ++K SN+ + D + + D+GL + T YRAPE+ +
Sbjct: 141 IH-SADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 520 VTFKSDVYSFGVLLLELLTGK 540
D++S G ++ ELLTG+
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 87/204 (42%), Gaps = 23/204 (11%)
Query: 352 EVLGKGSVGTSYKAVL----EEGTTVVVKRL-KEVAVGKREFE---MQMEVLGKIKHDNV 403
++LGKG+ G K +L G +K L KEV + K E + VL +H +
Sbjct: 11 KLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 404 VPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRI-ALSAARGLAHL 462
L+ + + D V +Y G L H SR T + R R L +L
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFT----EERARFYGAEIVSALEYL 121
Query: 463 HVSGKIVHGNIKASNILLRPDHDACVSDFGL-NPLFGNTTPPTRVAG---YRAPEVVETR 518
H S +V+ +IK N++L D ++DFGL + G Y APEV+E
Sbjct: 122 H-SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDN 180
Query: 519 KVTFKSDVYSFGVLLLELLTGKAP 542
D + GV++ E++ G+ P
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 96/205 (46%), Gaps = 32/205 (15%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVV---- 404
+G G+ G+ A + G V VK+L + + KR + ++ +L +KH+NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 405 ---PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
P R+ D L+ + + L+ ++ + + D+ + RGL +
Sbjct: 89 VFTPARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTD------DHVQFLIYQILRGLKY 140
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGL-----NPLFGNTTPPTRVAGYRAPEV-V 515
+H S I+H ++K SN+ + D + + DFGL + + G TR YRAPE+ +
Sbjct: 141 IH-SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVA--TR--WYRAPEIML 195
Query: 516 ETRKVTFKSDVYSFGVLLLELLTGK 540
D++S G ++ ELLTG+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 19/162 (11%)
Query: 391 QMEVLGKIKHDNVV----PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWD 446
++++L + +H+N++ +RA + + + + ++ L LL S D
Sbjct: 91 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSN------D 144
Query: 447 NRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL----NPLFGNT-- 500
+ RGL ++H S ++H ++K SN+LL D + DFGL +P +T
Sbjct: 145 HICYFLYQILRGLKYIH-SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGF 203
Query: 501 -TPPTRVAGYRAPEVVETRKVTFKS-DVYSFGVLLLELLTGK 540
T YRAPE++ K KS D++S G +L E+L+ +
Sbjct: 204 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 28/203 (13%)
Query: 352 EVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEM---------QMEVLGKIKHDN 402
+ LG+G T YKA + T + +K++ +G R ++++L ++ H N
Sbjct: 16 DFLGEGQFATVYKA--RDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPN 73
Query: 403 VVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHL 462
++ L + K LV+D+M L ++ + TP M + L +GL +L
Sbjct: 74 IIGLLDAFGHKSNISLVFDFMET-DLEVIIKDN-SLVLTPSHIKAYMLMTL---QGLEYL 128
Query: 463 HVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-------YRAPEVV 515
H I+H ++K +N+LL + ++DFGL FG+ P R YRAPE++
Sbjct: 129 H-QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGS---PNRAYXHQVVTRWYRAPELL 184
Query: 516 -ETRKVTFKSDVYSFGVLLLELL 537
R D+++ G +L ELL
Sbjct: 185 FGARMYGVGVDMWAVGCILAELL 207
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 98/219 (44%), Gaps = 27/219 (12%)
Query: 339 YSFDLEDLLRASAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAVG--KREFEMQMEVL 395
+ + EDL+ E +G+G+ G + L + T V VK +E K +F + +L
Sbjct: 109 WVLNHEDLV--LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARIL 166
Query: 396 GKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALL--HGSRGSGRTPLDWDNRMRIAL 453
+ H N+V L K +V + + G L G+R +T L ++
Sbjct: 167 KQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLL------QMVG 220
Query: 454 SAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLN---------PLFGNTTPPT 504
AA G+ +L S +H ++ A N L+ + +SDFG++ G P
Sbjct: 221 DAAAGMEYLE-SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPV 279
Query: 505 RVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAP 542
+ + APE + + + +SDV+SFG+LL E + G +P
Sbjct: 280 K---WTAPEALNYGRYSSESDVWSFGILLWETFSLGASP 315
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 96/205 (46%), Gaps = 32/205 (15%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVV---- 404
+G G+ G+ A + G V VK+L + + KR + ++ +L +KH+NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 405 ---PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
P R+ D L+ + + L+ ++ + + D+ + RGL +
Sbjct: 89 VFTPARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTD------DHVQFLIYQILRGLKY 140
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGL-----NPLFGNTTPPTRVAGYRAPEV-V 515
+H S I+H ++K SN+ + D + + DFGL + + G TR YRAPE+ +
Sbjct: 141 IH-SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVA--TR--WYRAPEIML 195
Query: 516 ETRKVTFKSDVYSFGVLLLELLTGK 540
D++S G ++ ELLTG+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 18/204 (8%)
Query: 353 VLGKGSVGTSYKAVL----EEGTTVVVKRLKEVAVG--KREFEMQMEVLGKIKHDNVVPL 406
+G+G G ++ + V +K K + +F + + + H ++V L
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 407 RAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSG 466
+++ ++ + G L + L + S LD + + A + LA+L S
Sbjct: 77 IGVI-TENPVWIIMELCTLGELRSFLQVRKYS----LDLASLILYAYQLSTALAYLE-SK 130
Query: 467 KIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVT 521
+ VH +I A N+L+ + + DFGL+ ++T G + APE + R+ T
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 190
Query: 522 FKSDVYSFGVLLLELLT-GKAPNQ 544
SDV+ FGV + E+L G P Q
Sbjct: 191 SASDVWMFGVCMWEILMHGVKPFQ 214
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 101/224 (45%), Gaps = 30/224 (13%)
Query: 353 VLGKGSVGTSYKAVLEE--GTT--VVVKRLK-EVAVGKREFEMQMEVLGKI-----KHDN 402
VLGKGS G K +L E GT VK LK +V + + E M V ++ K
Sbjct: 27 VLGKGSFG---KVMLSERKGTDELYAVKILKKDVVIQDDDVECTM-VEKRVLALPGKPPF 82
Query: 403 VVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHL 462
+ L + + + D V +Y+ G L + G + P + + A A GL L
Sbjct: 83 LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQ-QVGRFKEP----HAVFYAAEIAIGLFFL 137
Query: 463 HVSGKIVHGNIKASNILLRPDHDACVSDFGL---NPLFGNTTPP-TRVAGYRAPEVVETR 518
G I++ ++K N++L + ++DFG+ N G TT Y APE++ +
Sbjct: 138 QSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQ 196
Query: 519 KVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVV 562
D ++FGVLL E+L G+AP EG D QS++
Sbjct: 197 PYGKSVDWWAFGVLLYEMLAGQAPF------EGEDEDELFQSIM 234
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 101/224 (45%), Gaps = 30/224 (13%)
Query: 353 VLGKGSVGTSYKAVLEE--GTT--VVVKRLK-EVAVGKREFEMQMEVLGKI-----KHDN 402
VLGKGS G K +L E GT VK LK +V + + E M V ++ K
Sbjct: 348 VLGKGSFG---KVMLSERKGTDELYAVKILKKDVVIQDDDVECTM-VEKRVLALPGKPPF 403
Query: 403 VVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHL 462
+ L + + + D V +Y+ G L + G + P + + A A GL L
Sbjct: 404 LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQ-QVGRFKEP----HAVFYAAEIAIGLFFL 458
Query: 463 HVSGKIVHGNIKASNILLRPDHDACVSDFGL---NPLFGNTTPP-TRVAGYRAPEVVETR 518
G I++ ++K N++L + ++DFG+ N G TT Y APE++ +
Sbjct: 459 QSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQ 517
Query: 519 KVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVV 562
D ++FGVLL E+L G+AP EG D QS++
Sbjct: 518 PYGKSVDWWAFGVLLYEMLAGQAPF------EGEDEDELFQSIM 555
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 72/162 (44%), Gaps = 16/162 (9%)
Query: 391 QMEVLGKIK-HDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRM 449
++++L K+ H N++ L+ Y + LV+D M G L L + + L
Sbjct: 60 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-----TEKVTLSEKETR 114
Query: 450 RIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG- 508
+I + + LH IVH ++K NILL D + ++DFG + V G
Sbjct: 115 KIMRALLEVICALH-KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGT 173
Query: 509 --YRAPEVVETRK------VTFKSDVYSFGVLLLELLTGKAP 542
Y APE++E + D++S GV++ LL G P
Sbjct: 174 PSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 215
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 96/205 (46%), Gaps = 32/205 (15%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVV---- 404
+G G+ G+ A + G V VK+L + + KR + ++ +L +KH+NV+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 84
Query: 405 ---PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
P R+ D L+ + + L+ ++ + + D+ + RGL +
Sbjct: 85 VFTPARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTD------DHVQFLIYQILRGLKY 136
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGL-----NPLFGNTTPPTRVAGYRAPEV-V 515
+H S I+H ++K SN+ + D + + DFGL + + G TR YRAPE+ +
Sbjct: 137 IH-SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVA--TR--WYRAPEIML 191
Query: 516 ETRKVTFKSDVYSFGVLLLELLTGK 540
D++S G ++ ELLTG+
Sbjct: 192 NWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 13/132 (9%)
Query: 418 LVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASN 477
+V +Y+ +L ++H P+ + + A + L H +G I+H ++K +N
Sbjct: 93 IVMEYVDGVTLRDIVHT-----EGPMTPKRAIEVIADACQALNFSHQNG-IIHRDVKPAN 146
Query: 478 ILLRPDHDACVSDFGLNPLF---GNTTPPTRV----AGYRAPEVVETRKVTFKSDVYSFG 530
I++ + V DFG+ GN+ T A Y +PE V +SDVYS G
Sbjct: 147 IMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLG 206
Query: 531 VLLLELLTGKAP 542
+L E+LTG+ P
Sbjct: 207 CVLYEVLTGEPP 218
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 18/204 (8%)
Query: 353 VLGKGSVGTSYKAVL----EEGTTVVVKRLKEVAVG--KREFEMQMEVLGKIKHDNVVPL 406
+G+G G ++ + V +K K + +F + + + H ++V L
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 407 RAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSG 466
+++ ++ + G L + L + S LD + + A + LA+L S
Sbjct: 77 IGVI-TENPVWIIMELCTLGELRSFLQVRKYS----LDLASLILYAYQLSTALAYLE-SK 130
Query: 467 KIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVT 521
+ VH +I A N+L+ + + DFGL+ ++T G + APE + R+ T
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 190
Query: 522 FKSDVYSFGVLLLELLT-GKAPNQ 544
SDV+ FGV + E+L G P Q
Sbjct: 191 SASDVWMFGVCMWEILMHGVKPFQ 214
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 13/132 (9%)
Query: 418 LVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASN 477
+V +Y+ +L ++H P+ + + A + L H +G I+H ++K +N
Sbjct: 93 IVMEYVDGVTLRDIVHT-----EGPMTPKRAIEVIADACQALNFSHQNG-IIHRDVKPAN 146
Query: 478 ILLRPDHDACVSDFGLNPLF---GNTTPPTRV----AGYRAPEVVETRKVTFKSDVYSFG 530
I++ + V DFG+ GN+ T A Y +PE V +SDVYS G
Sbjct: 147 IMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLG 206
Query: 531 VLLLELLTGKAP 542
+L E+LTG+ P
Sbjct: 207 CVLYEVLTGEPP 218
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 18/204 (8%)
Query: 353 VLGKGSVGTSYKAVL----EEGTTVVVKRLKEVAVG--KREFEMQMEVLGKIKHDNVVPL 406
+G+G G ++ + V +K K + +F + + + H ++V L
Sbjct: 14 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 73
Query: 407 RAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSG 466
+++ ++ + G L + L + S LD + + A + LA+L S
Sbjct: 74 IGVI-TENPVWIIMELCTLGELRSFLQVRKYS----LDLASLILYAYQLSTALAYLE-SK 127
Query: 467 KIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVT 521
+ VH +I A N+L+ + + DFGL+ ++T G + APE + R+ T
Sbjct: 128 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 187
Query: 522 FKSDVYSFGVLLLELLT-GKAPNQ 544
SDV+ FGV + E+L G P Q
Sbjct: 188 SASDVWMFGVCMWEILMHGVKPFQ 211
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 18/204 (8%)
Query: 353 VLGKGSVGTSYKAVL----EEGTTVVVKRLKEVAVG--KREFEMQMEVLGKIKHDNVVPL 406
+G+G G ++ + V +K K + +F + + + H ++V L
Sbjct: 22 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 81
Query: 407 RAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSG 466
+++ ++ + G L + L + S LD + + A + LA+L S
Sbjct: 82 IGVI-TENPVWIIMELCTLGELRSFLQVRKYS----LDLASLILYAYQLSTALAYLE-SK 135
Query: 467 KIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVT 521
+ VH +I A N+L+ + + DFGL+ ++T G + APE + R+ T
Sbjct: 136 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 195
Query: 522 FKSDVYSFGVLLLELLT-GKAPNQ 544
SDV+ FGV + E+L G P Q
Sbjct: 196 SASDVWMFGVCMWEILMHGVKPFQ 219
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 18/204 (8%)
Query: 353 VLGKGSVGTSYKAVL----EEGTTVVVKRLKEVAVG--KREFEMQMEVLGKIKHDNVVPL 406
+G+G G ++ + V +K K + +F + + + H ++V L
Sbjct: 20 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 79
Query: 407 RAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSG 466
+++ ++ + G L + L + S LD + + A + LA+L S
Sbjct: 80 IGVI-TENPVWIIMELCTLGELRSFLQVRKYS----LDLASLILYAYQLSTALAYLE-SK 133
Query: 467 KIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVT 521
+ VH +I A N+L+ + + DFGL+ ++T G + APE + R+ T
Sbjct: 134 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 193
Query: 522 FKSDVYSFGVLLLELLT-GKAPNQ 544
SDV+ FGV + E+L G P Q
Sbjct: 194 SASDVWMFGVCMWEILMHGVKPFQ 217
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 18/204 (8%)
Query: 353 VLGKGSVGTSYKAVL----EEGTTVVVKRLKEVAVG--KREFEMQMEVLGKIKHDNVVPL 406
+G+G G ++ + V +K K + +F + + + H ++V L
Sbjct: 19 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 78
Query: 407 RAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSG 466
+++ ++ + G L + L + S LD + + A + LA+L S
Sbjct: 79 IGVI-TENPVWIIMELCTLGELRSFLQVRKYS----LDLASLILYAYQLSTALAYLE-SK 132
Query: 467 KIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVT 521
+ VH +I A N+L+ + + DFGL+ ++T G + APE + R+ T
Sbjct: 133 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 192
Query: 522 FKSDVYSFGVLLLELLT-GKAPNQ 544
SDV+ FGV + E+L G P Q
Sbjct: 193 SASDVWMFGVCMWEILMHGVKPFQ 216
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 13/132 (9%)
Query: 418 LVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASN 477
+V +Y+ +L ++H P+ + + A + L H +G I+H ++K +N
Sbjct: 110 IVMEYVDGVTLRDIVHTE-----GPMTPKRAIEVIADACQALNFSHQNG-IIHRDVKPAN 163
Query: 478 ILLRPDHDACVSDFGLNPLF---GNTTPPTRV----AGYRAPEVVETRKVTFKSDVYSFG 530
I++ + V DFG+ GN+ T A Y +PE V +SDVYS G
Sbjct: 164 IMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLG 223
Query: 531 VLLLELLTGKAP 542
+L E+LTG+ P
Sbjct: 224 CVLYEVLTGEPP 235
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 13/132 (9%)
Query: 418 LVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASN 477
+V +Y+ +L ++H P+ + + A + L H +G I+H ++K +N
Sbjct: 93 IVMEYVDGVTLRDIVHTE-----GPMTPKRAIEVIADACQALNFSHQNG-IIHRDVKPAN 146
Query: 478 ILLRPDHDACVSDFGLNPLF---GNTTPPTRV----AGYRAPEVVETRKVTFKSDVYSFG 530
I++ + V DFG+ GN+ T A Y +PE V +SDVYS G
Sbjct: 147 IMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLG 206
Query: 531 VLLLELLTGKAP 542
+L E+LTG+ P
Sbjct: 207 CVLYEVLTGEPP 218
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 13/132 (9%)
Query: 418 LVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASN 477
+V +Y+ +L ++H P+ + + A + L H +G I+H ++K +N
Sbjct: 93 IVMEYVDGVTLRDIVHT-----EGPMTPKRAIEVIADACQALNFSHQNG-IIHRDVKPAN 146
Query: 478 ILLRPDHDACVSDFGLNPLF---GNTTPPTRV----AGYRAPEVVETRKVTFKSDVYSFG 530
I++ + V DFG+ GN+ T A Y +PE V +SDVYS G
Sbjct: 147 IMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLG 206
Query: 531 VLLLELLTGKAP 542
+L E+LTG+ P
Sbjct: 207 CVLYEVLTGEPP 218
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 87/201 (43%), Gaps = 19/201 (9%)
Query: 352 EVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKI-KHDNVVPLRAFY 410
E +G GS + V T + +K + KR+ ++E+L + +H N++ L+ Y
Sbjct: 33 ETIGVGSYSECKRCV--HKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLKDVY 90
Query: 411 YSKDEKLLVYDYMPAGSL-SALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIV 469
LV + M G L +L S R + + + + +LH G +V
Sbjct: 91 DDGKHVYLVTELMRGGELLDKILRQKFFSER------EASFVLHTIGKTVEYLHSQG-VV 143
Query: 470 HGNIKASNILLRPD--HDAC--VSDFGLNPLF----GNTTPPTRVAGYRAPEVVETRKVT 521
H ++K SNIL + + C + DFG G P A + APEV++ +
Sbjct: 144 HRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYD 203
Query: 522 FKSDVYSFGVLLLELLTGKAP 542
D++S G+LL +L G P
Sbjct: 204 EGCDIWSLGILLYTMLAGYTP 224
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 72/162 (44%), Gaps = 16/162 (9%)
Query: 391 QMEVLGKIK-HDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRM 449
++++L K+ H N++ L+ Y + LV+D M G L L + + L
Sbjct: 73 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-----TEKVTLSEKETR 127
Query: 450 RIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG- 508
+I + + LH IVH ++K NILL D + ++DFG + V G
Sbjct: 128 KIMRALLEVICALH-KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGT 186
Query: 509 --YRAPEVVETRK------VTFKSDVYSFGVLLLELLTGKAP 542
Y APE++E + D++S GV++ LL G P
Sbjct: 187 PSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 51/100 (51%), Gaps = 15/100 (15%)
Query: 455 AARGLAHLHVSGKIVHGNIKASNILLRPDHD-ACVSDFG----LNP-------LFGNTTP 502
A GL +LH +I+HG++KA N+LL D A + DFG L P L G+ P
Sbjct: 159 ALEGLEYLHTR-RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIP 217
Query: 503 PTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAP 542
T + APEVV + K D++S ++L +L G P
Sbjct: 218 GTET--HMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 18/204 (8%)
Query: 353 VLGKGSVGTSYKAVL----EEGTTVVVKRLKEVAVG--KREFEMQMEVLGKIKHDNVVPL 406
+G+G G ++ + V +K K + +F + + + H ++V L
Sbjct: 397 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 456
Query: 407 RAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSG 466
+++ ++ + G L + L + S LD + + A + LA+L S
Sbjct: 457 IGVI-TENPVWIIMELCTLGELRSFLQVRKFS----LDLASLILYAYQLSTALAYLE-SK 510
Query: 467 KIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVT 521
+ VH +I A N+L+ + + DFGL+ ++T G + APE + R+ T
Sbjct: 511 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 570
Query: 522 FKSDVYSFGVLLLELLT-GKAPNQ 544
SDV+ FGV + E+L G P Q
Sbjct: 571 SASDVWMFGVCMWEILMHGVKPFQ 594
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 76/175 (43%), Gaps = 14/175 (8%)
Query: 391 QMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMR 450
+ +V+ ++ H V L F + DEKL Y + LL R G D
Sbjct: 82 ERDVMSRLDHPFFVKLY-FTFQDDEKL--YFGLSYAKNGELLKYIRKIGS--FDETCTRF 136
Query: 451 IALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRV---- 506
L +LH G I+H ++K NILL D ++DFG + + R
Sbjct: 137 YTAEIVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195
Query: 507 --AGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQ 559
A Y +PE++ + SD+++ G ++ +L+ G P +A G EG+ + ++
Sbjct: 196 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA--GNEGLIFAKIIK 248
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 144/340 (42%), Gaps = 66/340 (19%)
Query: 347 LRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLK----EVAVGKREFEMQMEVLGKIK-HD 401
L S ++LG GS GT +G V VKR+ ++A+ M++++L + H
Sbjct: 34 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIAL------MEIKLLTESDDHP 87
Query: 402 NVVPLRAFYYSKDEKLLVYDYMPAGSLSAL-LHGSRGSGRTPLDWD---NRMRIALSAAR 457
NV+ +Y S+ +Y + +L+ L S+ L N + + A
Sbjct: 88 NVI---RYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 144
Query: 458 GLAHLHVSGKIVHGNIKASNILL----RPDHDA---------CVSDFGLNPLFG------ 498
G+AHLH S KI+H ++K NIL+ R D +SDFGL
Sbjct: 145 GVAHLH-SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXF 203
Query: 499 --NTTPPTRVAGYRAPEVVE---TRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGI 552
N P+ +G+RAPE++E R++T D++S G + +L+ GK P E
Sbjct: 204 RXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES- 262
Query: 553 DLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRM 612
+++R +F ++ M+ + + + + + P +RP +V+R
Sbjct: 263 -------NIIR-----GIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH 310
Query: 613 IENMNRGETDDGLRQSSDDPSKGSDGHTPPPESRTPPTAL 652
+ + + L + SD E+R PP+AL
Sbjct: 311 PLFWPKSKKLEFLLKVSD---------RLEIENRDPPSAL 341
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 74/158 (46%), Gaps = 14/158 (8%)
Query: 391 QMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALL--HGSRGSGRTPLDWDNR 448
++ ++ + H N+V L ++ L+ +Y G + L HG ++
Sbjct: 64 EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEA----RSK 119
Query: 449 MRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLF---GNTTPPTR 505
R +SA + + H +IVH ++KA N+LL D + ++DFG + F G
Sbjct: 120 FRQIVSAVQ---YCH-QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCG 175
Query: 506 VAGYRAPEVVETRKVTF-KSDVYSFGVLLLELLTGKAP 542
Y APE+ + +K + DV+S GV+L L++G P
Sbjct: 176 APPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 213
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 88/204 (43%), Gaps = 18/204 (8%)
Query: 353 VLGKGSVGTSYKAVL----EEGTTVVVKRLKEVAVG--KREFEMQMEVLGKIKHDNVVPL 406
+G+G G ++ + V +K K + +F + + + H ++V L
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 407 RAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSG 466
+++ ++ + G L + L + S LD + + A + LA+L S
Sbjct: 77 IGVI-TENPVWIIMELCTLGELRSFLQVRKFS----LDLASLILYAYQLSTALAYLE-SK 130
Query: 467 KIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVT 521
+ VH +I A N+L+ + DFGL+ ++T G + APE + R+ T
Sbjct: 131 RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 190
Query: 522 FKSDVYSFGVLLLELLT-GKAPNQ 544
SDV+ FGV + E+L G P Q
Sbjct: 191 SASDVWMFGVCMWEILMHGVKPFQ 214
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 51/100 (51%), Gaps = 15/100 (15%)
Query: 455 AARGLAHLHVSGKIVHGNIKASNILLRPDHD-ACVSDFG----LNP-------LFGNTTP 502
A GL +LH +I+HG++KA N+LL D A + DFG L P L G+ P
Sbjct: 175 ALEGLEYLHTR-RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIP 233
Query: 503 PTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAP 542
T + APEVV + K D++S ++L +L G P
Sbjct: 234 GTET--HMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 144/340 (42%), Gaps = 66/340 (19%)
Query: 347 LRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLK----EVAVGKREFEMQMEVLGKIK-HD 401
L S ++LG GS GT +G V VKR+ ++A+ M++++L + H
Sbjct: 34 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIAL------MEIKLLTESDDHP 87
Query: 402 NVVPLRAFYYSKDEKLLVYDYMPAGSLSAL-LHGSRGSGRTPLDWD---NRMRIALSAAR 457
NV+ +Y S+ +Y + +L+ L S+ L N + + A
Sbjct: 88 NVI---RYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 144
Query: 458 GLAHLHVSGKIVHGNIKASNILL----RPDHDA---------CVSDFGLNPLFG------ 498
G+AHLH S KI+H ++K NIL+ R D +SDFGL
Sbjct: 145 GVAHLH-SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXF 203
Query: 499 --NTTPPTRVAGYRAPEVVE---TRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGI 552
N P+ +G+RAPE++E R++T D++S G + +L+ GK P E
Sbjct: 204 RXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES- 262
Query: 553 DLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRM 612
+++R +F ++ M+ + + + + + P +RP +V+R
Sbjct: 263 -------NIIR-----GIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH 310
Query: 613 IENMNRGETDDGLRQSSDDPSKGSDGHTPPPESRTPPTAL 652
+ + + L + SD E+R PP+AL
Sbjct: 311 PLFWPKSKKLEFLLKVSD---------RLEIENRDPPSAL 341
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 92/230 (40%), Gaps = 35/230 (15%)
Query: 337 GVYSFDLEDLLRASAEVLGKGSVGTSYKA---VLEEGTTVVVKRLKEVAVGKREFEMQME 393
G Y D E + + LG+G G ++A V + + RL + + + +++
Sbjct: 1 GRYLTDFEPI-----QCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVK 55
Query: 394 VLGKIKHDNVVPLRAFYYSKD--EKLL-----VYDYMPAGSLSALLHGSRGSGRTPLDWD 446
L K++H +V + K+ EKL VY Y+ +GR ++
Sbjct: 56 ALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEER 115
Query: 447 NR---MRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL---------- 493
R + I L A + LH G ++H ++K SNI D V DFGL
Sbjct: 116 ERSVCLHIFLQIAEAVEFLHSKG-LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEE 174
Query: 494 ------NPLFGNTTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELL 537
P + T Y +PE + + K D++S G++L ELL
Sbjct: 175 QTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 145/344 (42%), Gaps = 70/344 (20%)
Query: 347 LRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLK----EVAVGKREFEMQMEVLGKIK-HD 401
L S ++LG GS GT +G V VKR+ ++A+ M++++L + H
Sbjct: 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIAL------MEIKLLTESDDHP 69
Query: 402 NVVPLRAFYYSKDEKLLVYDYMPAGSLSAL-LHGSRGSGRTPLDWD---NRMRIALSAAR 457
NV+ +Y S+ +Y + +L+ L S+ L N + + A
Sbjct: 70 NVI---RYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 126
Query: 458 GLAHLHVSGKIVHGNIKASNILL----RPDHDA---------CVSDFGL--------NPL 496
G+AHLH S KI+H ++K NIL+ R D +SDFGL +
Sbjct: 127 GVAHLH-SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSF 185
Query: 497 FGNTTPPTRVAGYRAPEVVE-------TRKVTFKSDVYSFGVLLLELLT-GKAPNQASLG 548
N P+ +G+RAPE++E R++T D++S G + +L+ GK P
Sbjct: 186 RTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS 245
Query: 549 EEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQE 608
E +++R +F ++ M+ + + + + + P +RP +
Sbjct: 246 RES--------NIIR-----GIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMK 292
Query: 609 VVRMIENMNRGETDDGLRQSSDDPSKGSDGHTPPPESRTPPTAL 652
V+R + + + L + SD E+R PP+AL
Sbjct: 293 VLRHPLFWPKSKKLEFLLKVSD---------RLEIENRDPPSAL 327
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 107/239 (44%), Gaps = 31/239 (12%)
Query: 342 DLEDLLRASA--EVLGKGSVGTSYKAV-LEEGTTVVVKRLKEVAVGKR--EFEMQMEVLG 396
D ++LL+ E +G G A + G V +K + + +G + ++E L
Sbjct: 4 DYDELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALK 63
Query: 397 KIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSL-SALLHGSRGSGRTPLDWDNRMRIAL-S 454
++H ++ L + ++ +V +Y P G L ++ R S + R+
Sbjct: 64 NLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLS-------EEETRVVFRQ 116
Query: 455 AARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL------NPLFGNTTPPTRVAG 508
+A++H G H ++K N+L H + DFGL N + T +A
Sbjct: 117 IVSAVAYVHSQG-YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLA- 174
Query: 509 YRAPEVVETRK-VTFKSDVYSFGVLLLELLTGKAP----NQASLGEEGI----DLPRWV 558
Y APE+++ + + ++DV+S G+LL L+ G P N +L ++ + D+P+W+
Sbjct: 175 YAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWL 233
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 72/162 (44%), Gaps = 16/162 (9%)
Query: 391 QMEVLGKIK-HDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRM 449
++++L K+ H N++ L+ Y + LV+D M G L L + + L
Sbjct: 73 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-----TEKVTLSEKETR 127
Query: 450 RIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG- 508
+I + + LH IVH ++K NILL D + ++DFG + V G
Sbjct: 128 KIMRALLEVICALH-KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCGT 186
Query: 509 --YRAPEVVETRK------VTFKSDVYSFGVLLLELLTGKAP 542
Y APE++E + D++S GV++ LL G P
Sbjct: 187 PSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 19/162 (11%)
Query: 391 QMEVLGKIKHDNVV----PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWD 446
++++L + +H+N++ +RA + + + + + L LL S D
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN------D 124
Query: 447 NRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL----NPLFGNT-- 500
+ RGL ++H S ++H ++K SN+LL D + DFGL +P +T
Sbjct: 125 HICYFLYQILRGLKYIH-SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGF 183
Query: 501 -TPPTRVAGYRAPEVVETRKVTFKS-DVYSFGVLLLELLTGK 540
T YRAPE++ K KS D++S G +L E+L+ +
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 76/175 (43%), Gaps = 14/175 (8%)
Query: 391 QMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMR 450
+ +V+ ++ H V L F + DEKL Y + LL R G D
Sbjct: 82 ERDVMSRLDHPFFVKLY-FTFQDDEKL--YFGLSYAKNGELLKYIRKIGS--FDETCTRF 136
Query: 451 IALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRV---- 506
L +LH G I+H ++K NILL D ++DFG + + R
Sbjct: 137 YTAEIVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195
Query: 507 --AGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQ 559
A Y +PE++ + SD+++ G ++ +L+ G P +A G EG+ + ++
Sbjct: 196 GTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRA--GNEGLIFAKIIK 248
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 19/162 (11%)
Query: 391 QMEVLGKIKHDNVV----PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWD 446
++++L + +H+N++ +RA + + + + + L LL S D
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN------D 128
Query: 447 NRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL----NPLFGNT-- 500
+ RGL ++H S ++H ++K SN+LL D + DFGL +P +T
Sbjct: 129 HICYFLYQILRGLKYIH-SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGF 187
Query: 501 -TPPTRVAGYRAPEVVETRKVTFKS-DVYSFGVLLLELLTGK 540
T YRAPE++ K KS D++S G +L E+L+ +
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 19/162 (11%)
Query: 391 QMEVLGKIKHDNVV----PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWD 446
++++L + +H+N++ +RA + + + + + L LL S D
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN------D 124
Query: 447 NRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL----NPLFGNT-- 500
+ RGL ++H S ++H ++K SN+LL D + DFGL +P +T
Sbjct: 125 HICYFLYQILRGLKYIH-SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGF 183
Query: 501 -TPPTRVAGYRAPEVVETRKVTFKS-DVYSFGVLLLELLTGK 540
T YRAPE++ K KS D++S G +L E+L+ +
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 79/176 (44%), Gaps = 20/176 (11%)
Query: 381 VAVGKREFEMQMEVLGKIK----------HDNVVPLRAFYYSKDEKLLVYDYMPAGSLSA 430
V + R+ ++V+GKIK H +++ L + + +V +Y+ G L
Sbjct: 41 VKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFD 100
Query: 431 LLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSD 490
+ GR R+ + +A H H+ +VH ++K N+LL +A ++D
Sbjct: 101 YI---CKHGRVEEMEARRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIAD 154
Query: 491 FGLNPLFGNTTPPTRVAG---YRAPEVVETRKVTF-KSDVYSFGVLLLELLTGKAP 542
FGL+ + + G Y APEV+ R + D++S GV+L LL G P
Sbjct: 155 FGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLP 210
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 19/162 (11%)
Query: 391 QMEVLGKIKHDNVV----PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWD 446
++++L + +H+N++ +RA + + + + + L LL S D
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN------D 128
Query: 447 NRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL----NPLFGNT-- 500
+ RGL ++H S ++H ++K SN+LL D + DFGL +P +T
Sbjct: 129 HICYFLYQILRGLKYIH-SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGF 187
Query: 501 -TPPTRVAGYRAPEVVETRKVTFKS-DVYSFGVLLLELLTGK 540
T YRAPE++ K KS D++S G +L E+L+ +
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 74/167 (44%), Gaps = 20/167 (11%)
Query: 390 MQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDN-- 447
++ ++L K+ +V L + +K + LV M G + ++ +D DN
Sbjct: 234 VEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYN--------VDEDNPG 285
Query: 448 --RMRIALSAAR---GLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTP 502
R A+ GL HLH I++ ++K N+LL D + +SD GL
Sbjct: 286 FQEPRAIFYTAQIVSGLEHLH-QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT 344
Query: 503 PTR----VAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQA 545
T+ G+ APE++ + F D ++ GV L E++ + P +A
Sbjct: 345 KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRA 391
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 74/158 (46%), Gaps = 14/158 (8%)
Query: 391 QMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALL--HGSRGSGRTPLDWDNR 448
++ ++ + H N+V L ++ L+ +Y G + L HG ++
Sbjct: 61 EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEA----RSK 116
Query: 449 MRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG 508
R +SA + + H +IVH ++KA N+LL D + ++DFG + F G
Sbjct: 117 FRQIVSAVQ---YCH-QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCG 172
Query: 509 ---YRAPEVVETRKVTF-KSDVYSFGVLLLELLTGKAP 542
Y APE+ + +K + DV+S GV+L L++G P
Sbjct: 173 SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 210
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 74/167 (44%), Gaps = 20/167 (11%)
Query: 390 MQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDN-- 447
++ ++L K+ +V L + +K + LV M G + ++ +D DN
Sbjct: 234 VEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYN--------VDEDNPG 285
Query: 448 --RMRIALSAAR---GLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTP 502
R A+ GL HLH I++ ++K N+LL D + +SD GL
Sbjct: 286 FQEPRAIFYTAQIVSGLEHLH-QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT 344
Query: 503 PTR----VAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQA 545
T+ G+ APE++ + F D ++ GV L E++ + P +A
Sbjct: 345 KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRA 391
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 74/167 (44%), Gaps = 20/167 (11%)
Query: 390 MQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDN-- 447
++ ++L K+ +V L + +K + LV M G + ++ +D DN
Sbjct: 234 VEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYN--------VDEDNPG 285
Query: 448 --RMRIALSAAR---GLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTP 502
R A+ GL HLH I++ ++K N+LL D + +SD GL
Sbjct: 286 FQEPRAIFYTAQIVSGLEHLH-QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT 344
Query: 503 PTR----VAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQA 545
T+ G+ APE++ + F D ++ GV L E++ + P +A
Sbjct: 345 KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRA 391
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 88/204 (43%), Gaps = 18/204 (8%)
Query: 353 VLGKGSVGTSYKAVL----EEGTTVVVKRLKEVAVG--KREFEMQMEVLGKIKHDNVVPL 406
+G+G G ++ + V +K K + +F + + + H ++V L
Sbjct: 397 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 456
Query: 407 RAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSG 466
+++ ++ + G L + L + S LD + + A + LA+L S
Sbjct: 457 IGVI-TENPVWIIMELCTLGELRSFLQVRKFS----LDLASLILYAYQLSTALAYLE-SK 510
Query: 467 KIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-----YRAPEVVETRKVT 521
+ VH +I A N+L+ + DFGL+ ++T G + APE + R+ T
Sbjct: 511 RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 570
Query: 522 FKSDVYSFGVLLLELLT-GKAPNQ 544
SDV+ FGV + E+L G P Q
Sbjct: 571 SASDVWMFGVCMWEILMHGVKPFQ 594
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 79/176 (44%), Gaps = 20/176 (11%)
Query: 381 VAVGKREFEMQMEVLGKIK----------HDNVVPLRAFYYSKDEKLLVYDYMPAGSLSA 430
V + R+ ++V+GKIK H +++ L + + +V +Y+ G L
Sbjct: 41 VKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFD 100
Query: 431 LLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSD 490
+ GR R+ + +A H H+ +VH ++K N+LL +A ++D
Sbjct: 101 YI---CKHGRVEEMEARRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIAD 154
Query: 491 FGLNPLFGNTTPPTRVAG---YRAPEVVETRKVTF-KSDVYSFGVLLLELLTGKAP 542
FGL+ + + G Y APEV+ R + D++S GV+L LL G P
Sbjct: 155 FGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLP 210
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 74/167 (44%), Gaps = 20/167 (11%)
Query: 390 MQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDN-- 447
++ ++L K+ +V L + +K + LV M G + ++ +D DN
Sbjct: 234 VEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYN--------VDEDNPG 285
Query: 448 --RMRIALSAAR---GLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTP 502
R A+ GL HLH I++ ++K N+LL D + +SD GL
Sbjct: 286 FQEPRAIFYTAQIVSGLEHLH-QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT 344
Query: 503 PTR----VAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQA 545
T+ G+ APE++ + F D ++ GV L E++ + P +A
Sbjct: 345 KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRA 391
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 87/201 (43%), Gaps = 19/201 (9%)
Query: 352 EVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKI-KHDNVVPLRAFY 410
E +G GS + V T + +K + KR+ ++E+L + +H N++ L+ Y
Sbjct: 33 ETIGVGSYSECKRCV--HKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLKDVY 90
Query: 411 YSKDEKLLVYDYMPAGSL-SALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIV 469
LV + M G L +L S R + + + + +LH G +V
Sbjct: 91 DDGKHVYLVTELMRGGELLDKILRQKFFSER------EASFVLHTIGKTVEYLHSQG-VV 143
Query: 470 HGNIKASNILLRPD--HDAC--VSDFGLNPLF----GNTTPPTRVAGYRAPEVVETRKVT 521
H ++K SNIL + + C + DFG G P A + APEV++ +
Sbjct: 144 HRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYD 203
Query: 522 FKSDVYSFGVLLLELLTGKAP 542
D++S G+LL +L G P
Sbjct: 204 EGCDIWSLGILLYTMLAGYTP 224
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 19/162 (11%)
Query: 391 QMEVLGKIKHDNVV----PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWD 446
++++L + +H+N++ +RA + + + + + L LL S D
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN------D 124
Query: 447 NRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL----NPLFGNT-- 500
+ RGL ++H S ++H ++K SN+LL D + DFGL +P +T
Sbjct: 125 HICYFLYQILRGLKYIH-SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGF 183
Query: 501 -TPPTRVAGYRAPEVVETRKVTFKS-DVYSFGVLLLELLTGK 540
T YRAPE++ K KS D++S G +L E+L+ +
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 90/205 (43%), Gaps = 25/205 (12%)
Query: 352 EVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEM------QMEVLGKIKHDNVVP 405
E +G+G+ GT +KA E +V LK V + + + ++ +L ++KH N+V
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVA--LKRVRLDDDDEGVPSSALREICLLKELKHKNIVR 65
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
L +S + LV+++ L G LD + +GL H S
Sbjct: 66 LHDVLHSDKKLTLVFEFC-DQDLKKYFDSCNGD----LDPEIVKSFLFQLLKGLGFCH-S 119
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-------YRAPEVVETR 518
++H ++K N+L+ + + ++DFGL FG P R YR P+V+
Sbjct: 120 RNVLHRDLKPQNLLINRNGELKLADFGLARAFGI---PVRCYSAEVVTLWYRPPDVLFGA 176
Query: 519 KVTFKS-DVYSFGVLLLELLTGKAP 542
K+ S D++S G + EL P
Sbjct: 177 KLYSTSIDMWSAGCIFAELANAARP 201
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 100/228 (43%), Gaps = 42/228 (18%)
Query: 343 LEDLLRASAEVLGKGSVGTSYKAVLE-------------EGTTVVVKRLKEVAVGKREFE 389
+EDL +G+G+ G YKA + EGT + + +E+A
Sbjct: 18 VEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIA------- 70
Query: 390 MQMEVLGKIKHDNVVPLRAFYYSKDEK--LLVYDYMPAGSLSAL-LHGSRGSGRTPLDWD 446
+L ++KH NV+ L+ + S ++ L++DY + H + + + P+
Sbjct: 71 ----LLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLP 126
Query: 447 NRMRIAL--SAARGLAHLHVSGKIVHGNIKASNILLR---PDHDAC-VSDFGLNPLF--- 497
M +L G+ +LH + ++H ++K +NIL+ P+ ++D G LF
Sbjct: 127 RGMVKSLLYQILDGIHYLHANW-VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSP 185
Query: 498 ----GNTTPPTRVAGYRAPE-VVETRKVTFKSDVYSFGVLLLELLTGK 540
+ P YRAPE ++ R T D+++ G + ELLT +
Sbjct: 186 LKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 233
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 76/163 (46%), Gaps = 24/163 (14%)
Query: 391 QMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALL--HGSRGSGRTPLDWDNR 448
++ ++ + H N+V L ++ LV +Y G + L HG +
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA----RAK 118
Query: 449 MRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNP--LFGNT------ 500
R +SA + + H IVH ++KA N+LL D + ++DFG + FGN
Sbjct: 119 FRQIVSAVQ---YCH-QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCG 174
Query: 501 TPPTRVAGYRAPEVVETRKVTF-KSDVYSFGVLLLELLTGKAP 542
+PP Y APE+ + +K + DV+S GV+L L++G P
Sbjct: 175 SPP-----YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 76/163 (46%), Gaps = 24/163 (14%)
Query: 391 QMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALL--HGSRGSGRTPLDWDNR 448
++ ++ + H N+V L ++ LV +Y G + L HG +
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA----RAK 118
Query: 449 MRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNP--LFGNT------ 500
R +SA + + H IVH ++KA N+LL D + ++DFG + FGN
Sbjct: 119 FRQIVSAVQ---YCH-QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCG 174
Query: 501 TPPTRVAGYRAPEVVETRKVTF-KSDVYSFGVLLLELLTGKAP 542
+PP Y APE+ + +K + DV+S GV+L L++G P
Sbjct: 175 SPP-----YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 76/163 (46%), Gaps = 24/163 (14%)
Query: 391 QMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALL--HGSRGSGRTPLDWDNR 448
++ ++ + H N+V L ++ LV +Y G + L HG +
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA----RAK 118
Query: 449 MRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNP--LFGNT------ 500
R +SA + + H IVH ++KA N+LL D + ++DFG + FGN
Sbjct: 119 FRQIVSAVQ---YCH-QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCG 174
Query: 501 TPPTRVAGYRAPEVVETRKVTF-KSDVYSFGVLLLELLTGKAP 542
+PP Y APE+ + +K + DV+S GV+L L++G P
Sbjct: 175 SPP-----YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 19/162 (11%)
Query: 391 QMEVLGKIKHDNVV----PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWD 446
++++L + +H+N++ +RA + + + + + L LL S D
Sbjct: 76 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN------D 129
Query: 447 NRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL----NPLFGNT-- 500
+ RGL ++H S ++H ++K SN+LL D + DFGL +P +T
Sbjct: 130 HICYFLYQILRGLKYIH-SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 188
Query: 501 -TPPTRVAGYRAPEVVETRKVTFKS-DVYSFGVLLLELLTGK 540
T YRAPE++ K KS D++S G +L E+L+ +
Sbjct: 189 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 87/205 (42%), Gaps = 17/205 (8%)
Query: 352 EVLGKGSVGTSYKA-VLEEGTTVVVKRLKEVAVGKRE----FEMQMEVLGKIKHDNVVPL 406
++LG+GS T+ A L +K L++ + K + +V+ ++ H V L
Sbjct: 36 KILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 407 RAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSG 466
F + DEKL Y + LL R G D L +LH G
Sbjct: 96 -YFTFQDDEKL--YFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYLHGKG 150
Query: 467 KIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRV------AGYRAPEVVETRKV 520
I+H ++K NILL D ++DFG + + R A Y +PE++ +
Sbjct: 151 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 209
Query: 521 TFKSDVYSFGVLLLELLTGKAPNQA 545
SD+++ G ++ +L+ G P +A
Sbjct: 210 CKSSDLWALGCIIYQLVAGLPPFRA 234
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 76/163 (46%), Gaps = 24/163 (14%)
Query: 391 QMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALL--HGSRGSGRTPLDWDNR 448
++ ++ + H N+V L ++ LV +Y G + L HG +
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA----RAK 118
Query: 449 MRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNP--LFGNT------ 500
R +SA + + H IVH ++KA N+LL D + ++DFG + FGN
Sbjct: 119 FRQIVSAVQ---YCH-QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCG 174
Query: 501 TPPTRVAGYRAPEVVETRKVTF-KSDVYSFGVLLLELLTGKAP 542
+PP Y APE+ + +K + DV+S GV+L L++G P
Sbjct: 175 SPP-----YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 19/162 (11%)
Query: 391 QMEVLGKIKHDNVV----PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWD 446
++++L + +H+N++ +RA + + + + + L LL S D
Sbjct: 77 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN------D 130
Query: 447 NRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL----NPLFGNT-- 500
+ RGL ++H S ++H ++K SN+LL D + DFGL +P +T
Sbjct: 131 HICYFLYQILRGLKYIH-SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 189
Query: 501 -TPPTRVAGYRAPEVVETRKVTFKS-DVYSFGVLLLELLTGK 540
T YRAPE++ K KS D++S G +L E+L+ +
Sbjct: 190 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 19/162 (11%)
Query: 391 QMEVLGKIKHDNVV----PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWD 446
++++L + +H+N++ +RA + + + + + L LL S D
Sbjct: 68 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN------D 121
Query: 447 NRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL----NPLFGNT-- 500
+ RGL ++H S ++H ++K SN+LL D + DFGL +P +T
Sbjct: 122 HICYFLYQILRGLKYIH-SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 180
Query: 501 -TPPTRVAGYRAPEVVETRKVTFKS-DVYSFGVLLLELLTGK 540
T YRAPE++ K KS D++S G +L E+L+ +
Sbjct: 181 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 19/162 (11%)
Query: 391 QMEVLGKIKHDNVV----PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWD 446
++++L + +H+N++ +RA + + + + + L LL S D
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN------D 128
Query: 447 NRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL----NPLFGNT-- 500
+ RGL ++H S ++H ++K SN+LL D + DFGL +P +T
Sbjct: 129 HICYFLYQILRGLKYIH-SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 187
Query: 501 -TPPTRVAGYRAPEVVETRKVTFKS-DVYSFGVLLLELLTGK 540
T YRAPE++ K KS D++S G +L E+L+ +
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 19/162 (11%)
Query: 391 QMEVLGKIKHDNVV----PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWD 446
++++L + +H+N++ +RA + + + + + L LL S D
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN------D 124
Query: 447 NRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL----NPLFGNT-- 500
+ RGL ++H S ++H ++K SN+LL D + DFGL +P +T
Sbjct: 125 HICYFLYQILRGLKYIH-SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 183
Query: 501 -TPPTRVAGYRAPEVVETRKVTFKS-DVYSFGVLLLELLTGK 540
T YRAPE++ K KS D++S G +L E+L+ +
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 19/162 (11%)
Query: 391 QMEVLGKIKHDNVV----PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWD 446
++++L + +H+N++ +RA + + + + + L LL S D
Sbjct: 79 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN------D 132
Query: 447 NRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL----NPLFGNT-- 500
+ RGL ++H S ++H ++K SN+LL D + DFGL +P +T
Sbjct: 133 HICYFLYQILRGLKYIH-SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 191
Query: 501 -TPPTRVAGYRAPEVVETRKVTFKS-DVYSFGVLLLELLTGK 540
T YRAPE++ K KS D++S G +L E+L+ +
Sbjct: 192 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 19/162 (11%)
Query: 391 QMEVLGKIKHDNVV----PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWD 446
++++L + +H+N++ +RA + + + + + L LL S D
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN------D 124
Query: 447 NRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL----NPLFGNT-- 500
+ RGL ++H S ++H ++K SN+LL D + DFGL +P +T
Sbjct: 125 HICYFLYQILRGLKYIH-SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 183
Query: 501 -TPPTRVAGYRAPEVVETRKVTFKS-DVYSFGVLLLELLTGK 540
T YRAPE++ K KS D++S G +L E+L+ +
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 19/162 (11%)
Query: 391 QMEVLGKIKHDNVV----PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWD 446
++++L + +H+N++ +RA + + + + + L LL S D
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN------D 128
Query: 447 NRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL----NPLFGNT-- 500
+ RGL ++H S ++H ++K SN+LL D + DFGL +P +T
Sbjct: 129 HICYFLYQILRGLKYIH-SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 187
Query: 501 -TPPTRVAGYRAPEVVETRKVTFKS-DVYSFGVLLLELLTGK 540
T YRAPE++ K KS D++S G +L E+L+ +
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 19/162 (11%)
Query: 391 QMEVLGKIKHDNVV----PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWD 446
++++L + +H+N++ +RA + + + + + L LL S D
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSN------D 128
Query: 447 NRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL----NPLFGNT-- 500
+ RGL ++H S ++H ++K SN+LL D + DFGL +P +T
Sbjct: 129 HICYFLYQILRGLKYIH-SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 187
Query: 501 -TPPTRVAGYRAPEVVETRKVTFKS-DVYSFGVLLLELLTGK 540
T YRAPE++ K KS D++S G +L E+L+ +
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 84/201 (41%), Gaps = 16/201 (7%)
Query: 352 EVLGKGSVGTSYKAVLEE-GTTVVVKRLKEVAVGKREF---EMQMEVLGKIKHDNVVPLR 407
E LGKG+ + V + G K + + R+F E + + K++H N+V L
Sbjct: 35 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 94
Query: 408 AFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGK 467
+ LV+D + G L + R + +A+ H +G
Sbjct: 95 DSIQEESFHYLVFDLVTGGELFEDI-----VAREFYSEADASHCIQQILESIAYCHSNG- 148
Query: 468 IVHGNIKASNILLRPDHDAC---VSDFGLNPLFGNTTPPTRVAG---YRAPEVVETRKVT 521
IVH N+K N+LL ++DFGL ++ AG Y +PEV++ +
Sbjct: 149 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYS 208
Query: 522 FKSDVYSFGVLLLELLTGKAP 542
D+++ GV+L LL G P
Sbjct: 209 KPVDIWACGVILYILLVGYPP 229
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 19/162 (11%)
Query: 391 QMEVLGKIKHDNVV----PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWD 446
++++L + +H+N++ +RA + + + + + L LL S D
Sbjct: 69 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN------D 122
Query: 447 NRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL----NPLFGNT-- 500
+ RGL ++H S ++H ++K SN+LL D + DFGL +P +T
Sbjct: 123 HICYFLYQILRGLKYIH-SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 181
Query: 501 -TPPTRVAGYRAPEVVETRKVTFKS-DVYSFGVLLLELLTGK 540
T YRAPE++ K KS D++S G +L E+L+ +
Sbjct: 182 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 75/175 (42%), Gaps = 17/175 (9%)
Query: 378 LKEVAVGKREFEMQMEVLGKI-KHDNVVPLRAFYYSKDEKLLVYDYMPAGSL-SALLHGS 435
+K + KR+ ++E+L + +H N++ L+ Y +V + G L +L
Sbjct: 52 VKIIDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQK 111
Query: 436 RGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPD----HDACVSDF 491
S R + + + + +LH G +VH ++K SNIL + + DF
Sbjct: 112 FFSER------EASAVLFTITKTVEYLHAQG-VVHRDLKPSNILYVDESGNPESIRICDF 164
Query: 492 GLNPLF----GNTTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAP 542
G G P A + APEV+E + D++S GVLL LTG P
Sbjct: 165 GFAKQLRAENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 19/162 (11%)
Query: 391 QMEVLGKIKHDNVV----PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWD 446
++++L + +H+N++ +RA + + + + + L LL S D
Sbjct: 69 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN------D 122
Query: 447 NRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL----NPLFGNT-- 500
+ RGL ++H S ++H ++K SN+LL D + DFGL +P +T
Sbjct: 123 HICYFLYQILRGLKYIH-SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 181
Query: 501 -TPPTRVAGYRAPEVVETRKVTFKS-DVYSFGVLLLELLTGK 540
T YRAPE++ K KS D++S G +L E+L+ +
Sbjct: 182 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 19/162 (11%)
Query: 391 QMEVLGKIKHDNVV----PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWD 446
++++L + +H+N++ +RA + + + + + L LL S D
Sbjct: 73 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN------D 126
Query: 447 NRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL----NPLFGNT-- 500
+ RGL ++H S ++H ++K SN+LL D + DFGL +P +T
Sbjct: 127 HICYFLYQILRGLKYIH-SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 185
Query: 501 -TPPTRVAGYRAPEVVETRKVTFKS-DVYSFGVLLLELLTGK 540
T YRAPE++ K KS D++S G +L E+L+ +
Sbjct: 186 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 144/344 (41%), Gaps = 70/344 (20%)
Query: 347 LRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLK----EVAVGKREFEMQMEVLGKIK-HD 401
L S ++LG GS GT +G V VKR+ ++A+ M++++L + H
Sbjct: 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIAL------MEIKLLTESDDHP 69
Query: 402 NVVPLRAFYYSKDEKLLVYDYMPAGSLSAL-LHGSRGSGRTPLDWD---NRMRIALSAAR 457
NV+ +Y S+ +Y + +L+ L S+ L N + + A
Sbjct: 70 NVI---RYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 126
Query: 458 GLAHLHVSGKIVHGNIKASNILL----RPDHDA---------CVSDFGLNPLFG------ 498
G+AHLH S KI+H ++K NIL+ R D +SDFGL
Sbjct: 127 GVAHLH-SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXF 185
Query: 499 --NTTPPTRVAGYRAPEVVE-------TRKVTFKSDVYSFGVLLLELLT-GKAPNQASLG 548
N P+ +G+RAPE++E R++T D++S G + +L+ GK P
Sbjct: 186 RXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS 245
Query: 549 EEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQE 608
E +++R +F ++ M+ + + + + + P +RP +
Sbjct: 246 RES--------NIIR-----GIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMK 292
Query: 609 VVRMIENMNRGETDDGLRQSSDDPSKGSDGHTPPPESRTPPTAL 652
V+R + + + L + SD E+R PP+AL
Sbjct: 293 VLRHPLFWPKSKKLEFLLKVSD---------RLEIENRDPPSAL 327
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 88/197 (44%), Gaps = 18/197 (9%)
Query: 354 LGKGSVG----TSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAF 409
GK VG T +K ++ ++ L V +RE ++ L +H +++ L
Sbjct: 29 FGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRRE----IQNLKLFRHPHIIKLYQV 84
Query: 410 YYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIV 469
+ + +V +Y+ G L + +GR LD R+ G+ + H +V
Sbjct: 85 ISTPSDIFMVMEYVSGGELFDYI---CKNGR--LDEKESRRLFQQILSGVDYCH-RHMVV 138
Query: 470 HGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG---YRAPEVVETRKVTF-KSD 525
H ++K N+LL +A ++DFGL+ + + G Y APEV+ R + D
Sbjct: 139 HRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLYAGPEVD 198
Query: 526 VYSFGVLLLELLTGKAP 542
++S GV+L LL G P
Sbjct: 199 IWSSGVILYALLCGTLP 215
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 92/201 (45%), Gaps = 24/201 (11%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVV---- 404
+G G+ G+ A + G V VK+L + + KR + ++ +L +KH+NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 405 ---PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
P R+ D L+ + + L+ ++ + + D+ + RGL +
Sbjct: 89 VFTPARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTD------DHVQFLIYQILRGLKY 140
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN-TTPPTRVAGYRAPEV-VETRK 519
+H S I+H ++K SN+ + D + + DF L + T YRAPE+ +
Sbjct: 141 IH-SADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 520 VTFKSDVYSFGVLLLELLTGK 540
D++S G ++ ELLTG+
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 92/207 (44%), Gaps = 17/207 (8%)
Query: 354 LGKGSVGTSYKAVLE-EGTTVVVKRLKEVAVGKREFEM---QMEVLGKIKHDNVVPL--R 407
+G GS G K + +G +V K L ++ + E +M ++ +L ++KH N+V R
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 408 AFYYSKDEKLLVYDYMPAGSLSALLHGSRGSG-RTPLDWDNRMRIALSAARGLAHLHVSG 466
+ +V +Y G L++++ ++G+ R LD + +R+ L H
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVI--TKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131
Query: 467 K----IVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTR----VAGYRAPEVVETR 518
++H ++K +N+ L + + DFGL + + + Y +PE +
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQMNRM 191
Query: 519 KVTFKSDVYSFGVLLLELLTGKAPNQA 545
KSD++S G LL EL P A
Sbjct: 192 SYNEKSDIWSLGCLLYELCALMPPFTA 218
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 92/201 (45%), Gaps = 24/201 (11%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVV---- 404
+G G+ G+ A + G V VK+L + + KR + ++ +L +KH+NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 405 ---PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
P R+ D L+ + + L+ ++ + + D+ + RGL +
Sbjct: 89 VFTPARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTD------DHVQFLIYQILRGLKY 140
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN-TTPPTRVAGYRAPEV-VETRK 519
+H S I+H ++K SN+ + D + + FGL + T YRAPE+ +
Sbjct: 141 IH-SADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 520 VTFKSDVYSFGVLLLELLTGK 540
D++S G ++ ELLTG+
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 87/205 (42%), Gaps = 17/205 (8%)
Query: 352 EVLGKGSVGTSYKA-VLEEGTTVVVKRLKEVAVGKRE----FEMQMEVLGKIKHDNVVPL 406
++LG+GS T A L +K L++ + K + +V+ ++ H V L
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 407 RAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSG 466
F + DEKL Y + LL R G D L +LH G
Sbjct: 98 -YFTFQDDEKL--YFGLSYAKNGCLLKYIRKIGS--FDETCTRFYTAEIVSALEYLHGKG 152
Query: 467 KIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRV------AGYRAPEVVETRKV 520
I+H ++K NILL D ++DFG + + R A Y +PE++ +
Sbjct: 153 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA 211
Query: 521 TFKSDVYSFGVLLLELLTGKAPNQA 545
+ SD+++ G ++ +L+ G P +A
Sbjct: 212 SKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 19/162 (11%)
Query: 391 QMEVLGKIKHDNVV----PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWD 446
++++L + +H+N++ +RA + + + + + L LL S D
Sbjct: 91 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN------D 144
Query: 447 NRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL----NPLFGNT-- 500
+ RGL ++H S ++H ++K SN+LL D + DFGL +P +T
Sbjct: 145 HICYFLYQILRGLKYIH-SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 203
Query: 501 -TPPTRVAGYRAPEVVETRKVTFKS-DVYSFGVLLLELLTGK 540
T YRAPE++ K KS D++S G +L E+L+ +
Sbjct: 204 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 76/163 (46%), Gaps = 24/163 (14%)
Query: 391 QMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALL--HGSRGSGRTPLDWDNR 448
++ ++ + H N+V L ++ LV +Y G + L HG +
Sbjct: 64 EVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA----RAK 119
Query: 449 MRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLF--GNT------ 500
R +SA + + H IVH ++KA N+LL D + ++DFG + F GN
Sbjct: 120 FRQIVSAVQ---YCH-QKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCG 175
Query: 501 TPPTRVAGYRAPEVVETRKVTF-KSDVYSFGVLLLELLTGKAP 542
+PP Y APE+ + +K + DV+S GV+L L++G P
Sbjct: 176 SPP-----YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 213
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 75/163 (46%), Gaps = 24/163 (14%)
Query: 391 QMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALL--HGSRGSGRTPLDWDNR 448
++ ++ + H N+V L ++ LV +Y G + L HG +
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA----RAK 118
Query: 449 MRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNP--LFGNT------ 500
R +SA + + H IVH ++KA N+LL D + ++DFG + FGN
Sbjct: 119 FRQIVSAVQ---YCH-QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCG 174
Query: 501 TPPTRVAGYRAPEVVETRKVTF-KSDVYSFGVLLLELLTGKAP 542
PP Y APE+ + +K + DV+S GV+L L++G P
Sbjct: 175 APP-----YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 76/163 (46%), Gaps = 24/163 (14%)
Query: 391 QMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALL--HGSRGSGRTPLDWDNR 448
++ ++ + H N+V L ++ LV +Y G + L HG +
Sbjct: 56 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEA----RAK 111
Query: 449 MRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNP--LFGNT------ 500
R +SA + + H IVH ++KA N+LL D + ++DFG + FGN
Sbjct: 112 FRQIVSAVQ---YCH-QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCG 167
Query: 501 TPPTRVAGYRAPEVVETRKVTF-KSDVYSFGVLLLELLTGKAP 542
+PP Y APE+ + +K + DV+S GV+L L++G P
Sbjct: 168 SPP-----YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 205
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 92/201 (45%), Gaps = 24/201 (11%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVV---- 404
+G G+ G+ A + G V VK+L + + KR + ++ +L +KH+NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 405 ---PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
P R+ D L+ + + L+ ++ + + D+ + RGL +
Sbjct: 89 VFTPARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTD------DHVQFLIYQILRGLKY 140
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN-TTPPTRVAGYRAPEV-VETRK 519
+H S I+H ++K SN+ + D + + D GL + T YRAPE+ +
Sbjct: 141 IH-SADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 520 VTFKSDVYSFGVLLLELLTGK 540
D++S G ++ ELLTG+
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 95/227 (41%), Gaps = 33/227 (14%)
Query: 345 DLLRASAEVLGKGSVGTSYKAVLEEGT-------------TVVVKRLKEVAVGKREFEMQ 391
+LLR VLGKG G ++ G ++V+ K+ A K E
Sbjct: 20 ELLR----VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAE---- 71
Query: 392 MEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRI 451
+L ++KH +V L + + + L+ +Y+ G L L R + ++
Sbjct: 72 RNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLE------REGIFMEDTACF 125
Query: 452 ALSA-ARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL--NPLFGNTTPPTRVAG 508
L+ + L HLH G I++ ++K NI+L ++DFGL + T T
Sbjct: 126 YLAEISMALGHLHQKG-IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGT 184
Query: 509 --YRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGID 553
Y APE++ D +S G L+ ++LTG P ++ ID
Sbjct: 185 IEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTID 231
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 95/210 (45%), Gaps = 24/210 (11%)
Query: 345 DLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRL--KEVAVGKREF---EMQMEVLGKIK 399
DLLR V+G+GS L++ + R+ KE+ + + + V +
Sbjct: 55 DLLR----VIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQAS 110
Query: 400 -HDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARG 458
H +V L + + ++ V +Y+ G L + H R + L ++ + +
Sbjct: 111 NHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQR---QRKLPEEHARFYSAEISLA 165
Query: 459 LAHLHVSGKIVHGNIKASNILLRPDHDACVSDFG-----LNPLFGNTTPP-TRVAGYRAP 512
L +LH G I++ ++K N+LL + ++D+G L P G+TT Y AP
Sbjct: 166 LNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP--GDTTSTFCGTPNYIAP 222
Query: 513 EVVETRKVTFKSDVYSFGVLLLELLTGKAP 542
E++ F D ++ GVL+ E++ G++P
Sbjct: 223 EILRGEDYGFSVDWWALGVLMFEMMAGRSP 252
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 16/201 (7%)
Query: 352 EVLGKGSVGTSYKAVLEE-GTTVVVKRLKEVAVGKREF---EMQMEVLGKIKHDNVVPLR 407
E LGKG+ + V + G K + + R+F E + + K++H N+V L
Sbjct: 11 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 70
Query: 408 AFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGK 467
+ LV+D + G L + D + ++ L + +A+ H +G
Sbjct: 71 DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEA--DASHCIQQILES---IAYCHSNG- 124
Query: 468 IVHGNIKASNILLRPDHDAC---VSDFGLNPLFGNTTPPTRVAG---YRAPEVVETRKVT 521
IVH N+K N+LL ++DFGL ++ AG Y +PEV++ +
Sbjct: 125 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYS 184
Query: 522 FKSDVYSFGVLLLELLTGKAP 542
D+++ GV+L LL G P
Sbjct: 185 KPVDIWACGVILYILLVGYPP 205
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 92/201 (45%), Gaps = 24/201 (11%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVV---- 404
+G G+ G+ A + G V VK+L + + KR + ++ +L +KH+NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 405 ---PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
P R+ D L+ + + L+ ++ + + D+ + RGL +
Sbjct: 89 VFTPARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTD------DHVQFLIYQILRGLKY 140
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN-TTPPTRVAGYRAPEV-VETRK 519
+H S I+H ++K SN+ + D + + D GL + T YRAPE+ +
Sbjct: 141 IH-SADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 520 VTFKSDVYSFGVLLLELLTGK 540
D++S G ++ ELLTG+
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Query: 457 RGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL----NPLFGNT---TPPTRVAGY 509
RGL ++H S ++H ++K SN+LL D + DFGL +P +T T Y
Sbjct: 137 RGLKYIH-SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWY 195
Query: 510 RAPEVVETRKVTFKS-DVYSFGVLLLELLTGK 540
RAPE++ K KS D++S G +L E+L+ +
Sbjct: 196 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 16/201 (7%)
Query: 352 EVLGKGSVGTSYKAVLEE-GTTVVVKRLKEVAVGKREF---EMQMEVLGKIKHDNVVPLR 407
E LGKG+ + V + G K + + R+F E + + K++H N+V L
Sbjct: 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 71
Query: 408 AFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGK 467
+ LV+D + G L + D + ++ L + +A+ H +G
Sbjct: 72 DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEA--DASHCIQQILES---IAYCHSNG- 125
Query: 468 IVHGNIKASNILLRPDHDAC---VSDFGLNPLFGNTTPPTRVAG---YRAPEVVETRKVT 521
IVH N+K N+LL ++DFGL ++ AG Y +PEV++ +
Sbjct: 126 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYS 185
Query: 522 FKSDVYSFGVLLLELLTGKAP 542
D+++ GV+L LL G P
Sbjct: 186 KPVDIWACGVILYILLVGYPP 206
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 92/217 (42%), Gaps = 33/217 (15%)
Query: 351 AEVLGKGSVGTSYKAVLEE-GTTVVVKR------LKEVAVGKREFEMQMEVLGKIKHDNV 403
+++LG+G+ ++ ++ G +K L+ V V REFE VL K+ H N+
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFE----VLKKLNHKNI 69
Query: 404 VPLRAF--YYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIAL-SAARGLA 460
V L A + K+L+ ++ P GSL +L + P ++ I L G+
Sbjct: 70 VKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLP---ESEFLIVLRDVVGGMN 126
Query: 461 HLHVSGKIVHGNIKASNILLRPDHDAC----VSDFGLNPLFGNTTPPTRVAG---YRAPE 513
HL +G IVH NIK NI+ D ++DFG + + G Y P+
Sbjct: 127 HLRENG-IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPD 185
Query: 514 VVE--------TRKVTFKSDVYSFGVLLLELLTGKAP 542
+ E +K D++S GV TG P
Sbjct: 186 MYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 19/101 (18%)
Query: 404 VPLRAFYYSKDEKLLVYDYM---PAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLA 460
+P R F + K ++Y + P+G++S + G P+DW M ++ S +RGL
Sbjct: 221 LPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENG----PIDWSGDMPVSCSLSRGLQ 276
Query: 461 HLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTT 501
L V NI L D + C +G + F T+
Sbjct: 277 VLLTP---VLANI------LEADQEKC---WGFDQFFAETS 305
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 16/201 (7%)
Query: 352 EVLGKGSVGTSYKAVLEE-GTTVVVKRLKEVAVGKREF---EMQMEVLGKIKHDNVVPLR 407
E LGKG+ + V + G K + + R+F E + + K++H N+V L
Sbjct: 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 71
Query: 408 AFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGK 467
+ LV+D + G L + D + ++ L + +A+ H +G
Sbjct: 72 DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEA--DASHCIQQILES---IAYCHSNG- 125
Query: 468 IVHGNIKASNILLRPDHDAC---VSDFGLNPLFGNTTPPTRVAG---YRAPEVVETRKVT 521
IVH N+K N+LL ++DFGL ++ AG Y +PEV++ +
Sbjct: 126 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYS 185
Query: 522 FKSDVYSFGVLLLELLTGKAP 542
D+++ GV+L LL G P
Sbjct: 186 KPVDIWACGVILYILLVGYPP 206
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 17/205 (8%)
Query: 352 EVLGKGSVGTSYKA-VLEEGTTVVVKRLKEVAVGKRE----FEMQMEVLGKIKHDNVVPL 406
++LG+GS T A L +K L++ + K + +V+ ++ H V L
Sbjct: 15 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 74
Query: 407 RAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSG 466
F + DEKL Y + LL R G D L +LH G
Sbjct: 75 -YFTFQDDEKL--YFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYLHGKG 129
Query: 467 KIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTR------VAGYRAPEVVETRKV 520
I+H ++K NILL D ++DFG + + R A Y +PE++ +
Sbjct: 130 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 188
Query: 521 TFKSDVYSFGVLLLELLTGKAPNQA 545
SD+++ G ++ +L+ G P +A
Sbjct: 189 CKSSDLWALGCIIYQLVAGLPPFRA 213
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 17/205 (8%)
Query: 352 EVLGKGSVGTSYKA-VLEEGTTVVVKRLKEVAVGKRE----FEMQMEVLGKIKHDNVVPL 406
++LG+GS T A L +K L++ + K + +V+ ++ H V L
Sbjct: 43 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 102
Query: 407 RAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSG 466
F + DEKL Y + LL R G D L +LH G
Sbjct: 103 -YFCFQDDEKL--YFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYLHGKG 157
Query: 467 KIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRV------AGYRAPEVVETRKV 520
I+H ++K NILL D ++DFG + + R A Y +PE++ +
Sbjct: 158 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 216
Query: 521 TFKSDVYSFGVLLLELLTGKAPNQA 545
SD+++ G ++ +L+ G P +A
Sbjct: 217 CKSSDLWALGCIIYQLVAGLPPFRA 241
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 17/205 (8%)
Query: 352 EVLGKGSVGTSYKA-VLEEGTTVVVKRLKEVAVGKRE----FEMQMEVLGKIKHDNVVPL 406
++LG+GS T A L +K L++ + K + +V+ ++ H V L
Sbjct: 16 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 75
Query: 407 RAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSG 466
F + DEKL Y + LL R G D L +LH G
Sbjct: 76 -YFTFQDDEKL--YFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYLHGKG 130
Query: 467 KIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTR------VAGYRAPEVVETRKV 520
I+H ++K NILL D ++DFG + + R A Y +PE++ +
Sbjct: 131 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 189
Query: 521 TFKSDVYSFGVLLLELLTGKAPNQA 545
SD+++ G ++ +L+ G P +A
Sbjct: 190 CKSSDLWALGCIIYQLVAGLPPFRA 214
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 17/205 (8%)
Query: 352 EVLGKGSVGTSYKA-VLEEGTTVVVKRLKEVAVGKRE----FEMQMEVLGKIKHDNVVPL 406
++LG+GS T A L +K L++ + K + +V+ ++ H V L
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 407 RAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSG 466
F + DEKL Y + LL R G D L +LH G
Sbjct: 96 -YFTFQDDEKL--YFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYLHGKG 150
Query: 467 KIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRV------AGYRAPEVVETRKV 520
I+H ++K NILL D ++DFG + + R A Y +PE++ +
Sbjct: 151 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 209
Query: 521 TFKSDVYSFGVLLLELLTGKAPNQA 545
SD+++ G ++ +L+ G P +A
Sbjct: 210 CKSSDLWALGCIIYQLVAGLPPFRA 234
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 17/205 (8%)
Query: 352 EVLGKGSVGTSYKA-VLEEGTTVVVKRLKEVAVGKRE----FEMQMEVLGKIKHDNVVPL 406
++LG+GS T A L +K L++ + K + +V+ ++ H V L
Sbjct: 35 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 94
Query: 407 RAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSG 466
F + DEKL Y + LL R G D L +LH G
Sbjct: 95 -YFTFQDDEKL--YFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYLHGKG 149
Query: 467 KIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTR------VAGYRAPEVVETRKV 520
I+H ++K NILL D ++DFG + + R A Y +PE++ +
Sbjct: 150 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA 208
Query: 521 TFKSDVYSFGVLLLELLTGKAPNQA 545
SD+++ G ++ +L+ G P +A
Sbjct: 209 CKSSDLWALGCIIYQLVAGLPPFRA 233
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 17/205 (8%)
Query: 352 EVLGKGSVGTSYKA-VLEEGTTVVVKRLKEVAVGKRE----FEMQMEVLGKIKHDNVVPL 406
++LG+GS T A L +K L++ + K + +V+ ++ H V L
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 407 RAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSG 466
F + DEKL Y + LL R G D L +LH G
Sbjct: 96 -YFTFQDDEKL--YFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYLHGKG 150
Query: 467 KIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRV------AGYRAPEVVETRKV 520
I+H ++K NILL D ++DFG + + R A Y +PE++ +
Sbjct: 151 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 209
Query: 521 TFKSDVYSFGVLLLELLTGKAPNQA 545
SD+++ G ++ +L+ G P +A
Sbjct: 210 CKSSDLWALGCIIYQLVAGLPPFRA 234
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 17/205 (8%)
Query: 352 EVLGKGSVGTSYKA-VLEEGTTVVVKRLKEVAVGKRE----FEMQMEVLGKIKHDNVVPL 406
++LG+GS T A L +K L++ + K + +V+ ++ H V L
Sbjct: 20 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 79
Query: 407 RAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSG 466
F + DEKL Y + LL R G D L +LH G
Sbjct: 80 -YFTFQDDEKL--YFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYLHGKG 134
Query: 467 KIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTR------VAGYRAPEVVETRKV 520
I+H ++K NILL D ++DFG + + R A Y +PE++ +
Sbjct: 135 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 193
Query: 521 TFKSDVYSFGVLLLELLTGKAPNQA 545
SD+++ G ++ +L+ G P +A
Sbjct: 194 CKSSDLWALGCIIYQLVAGLPPFRA 218
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 95/227 (41%), Gaps = 33/227 (14%)
Query: 345 DLLRASAEVLGKGSVGTSYKAVLEEGT-------------TVVVKRLKEVAVGKREFEMQ 391
+LLR VLGKG G ++ G ++V+ K+ A K E
Sbjct: 20 ELLR----VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAE---- 71
Query: 392 MEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRI 451
+L ++KH +V L + + + L+ +Y+ G L L R + ++
Sbjct: 72 RNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLE------REGIFMEDTACF 125
Query: 452 ALSA-ARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL-NPLFGNTTPPTRVAG- 508
L+ + L HLH G I++ ++K NI+L ++DFGL + T G
Sbjct: 126 YLAEISMALGHLHQKG-IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGT 184
Query: 509 --YRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGID 553
Y APE++ D +S G L+ ++LTG P ++ ID
Sbjct: 185 IEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTID 231
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 17/205 (8%)
Query: 352 EVLGKGSVGTSYKA-VLEEGTTVVVKRLKEVAVGKRE----FEMQMEVLGKIKHDNVVPL 406
++LG+GS T A L +K L++ + K + +V+ ++ H V L
Sbjct: 13 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 72
Query: 407 RAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSG 466
F + DEKL Y + LL R G D L +LH G
Sbjct: 73 -YFTFQDDEKL--YFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYLHGKG 127
Query: 467 KIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTR------VAGYRAPEVVETRKV 520
I+H ++K NILL D ++DFG + + R A Y +PE++ +
Sbjct: 128 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 186
Query: 521 TFKSDVYSFGVLLLELLTGKAPNQA 545
SD+++ G ++ +L+ G P +A
Sbjct: 187 CKSSDLWALGCIIYQLVAGLPPFRA 211
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 85/208 (40%), Gaps = 25/208 (12%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEM------------QMEVLGKIKHD 401
+ GS G V EG V +KR+ R + ++ +L H
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89
Query: 402 NVVPLRAFYYSKDE----KLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAAR 457
N++ LR + +E KL + + L+ ++H R + +
Sbjct: 90 NILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQR----IVISPQHIQYFMYHILL 145
Query: 458 GLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL---NPLFGNTTPPTRVAGYRAPEV 514
GL LH +G +VH ++ NILL ++D + DF L + N T YRAPE+
Sbjct: 146 GLHVLHEAG-VVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPEL 204
Query: 515 V-ETRKVTFKSDVYSFGVLLLELLTGKA 541
V + + T D++S G ++ E+ KA
Sbjct: 205 VMQFKGFTKLVDMWSAGCVMAEMFNRKA 232
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 17/205 (8%)
Query: 352 EVLGKGSVGTSYKA-VLEEGTTVVVKRLKEVAVGKRE----FEMQMEVLGKIKHDNVVPL 406
++LG+GS T A L +K L++ + K + +V+ ++ H V L
Sbjct: 39 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 98
Query: 407 RAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSG 466
F + DEKL Y + LL R G D L +LH G
Sbjct: 99 -YFTFQDDEKL--YFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYLHGKG 153
Query: 467 KIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRV------AGYRAPEVVETRKV 520
I+H ++K NILL D ++DFG + + R A Y +PE++ +
Sbjct: 154 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA 212
Query: 521 TFKSDVYSFGVLLLELLTGKAPNQA 545
SD+++ G ++ +L+ G P +A
Sbjct: 213 CKSSDLWALGCIIYQLVAGLPPFRA 237
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 92/201 (45%), Gaps = 24/201 (11%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVV---- 404
+G G+ G+ A + G V VK+L + + KR + ++ +L +KH+NV+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 405 ---PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
P R+ D L+ + + L+ ++ + + D+ + RGL +
Sbjct: 89 VFTPARSLEEFNDVYLVTH--LMGADLNNIVKCQKLTD------DHVQFLIYQILRGLKY 140
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN-TTPPTRVAGYRAPEV-VETRK 519
+H S I+H ++K SN+ + D + + D GL + T YRAPE+ +
Sbjct: 141 IH-SADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATRWYRAPEIMLNWMH 199
Query: 520 VTFKSDVYSFGVLLLELLTGK 540
D++S G ++ ELLTG+
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 24/210 (11%)
Query: 345 DLLRASAEVLGKGSVGTSYKAVLEEGTTV-VVKRLKEVAVGKRE----FEMQMEVLGKIK 399
DLLR V+G+GS L++ + +K +K+ V E + + V +
Sbjct: 23 DLLR----VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 78
Query: 400 -HDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARG 458
H +V L + + ++ V +Y+ G L + H R + P + +S A
Sbjct: 79 NHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQR-QRKLPEEHARFYSAEISLA-- 133
Query: 459 LAHLHVSGKIVHGNIKASNILLRPDHDACVSDFG-----LNPLFGNTTPP-TRVAGYRAP 512
L +LH G I++ ++K N+LL + ++D+G L P G+TT Y AP
Sbjct: 134 LNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP--GDTTSXFCGTPNYIAP 190
Query: 513 EVVETRKVTFKSDVYSFGVLLLELLTGKAP 542
E++ F D ++ GVL+ E++ G++P
Sbjct: 191 EILRGEDYGFSVDWWALGVLMFEMMAGRSP 220
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 85/208 (40%), Gaps = 25/208 (12%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEM------------QMEVLGKIKHD 401
+ GS G V EG V +KR+ R + ++ +L H
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89
Query: 402 NVVPLRAFYYSKDE----KLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAAR 457
N++ LR + +E KL + + L+ ++H R + +
Sbjct: 90 NILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQR----IVISPQHIQYFMYHILL 145
Query: 458 GLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL---NPLFGNTTPPTRVAGYRAPEV 514
GL LH +G +VH ++ NILL ++D + DF L + N T YRAPE+
Sbjct: 146 GLHVLHEAG-VVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPEL 204
Query: 515 V-ETRKVTFKSDVYSFGVLLLELLTGKA 541
V + + T D++S G ++ E+ KA
Sbjct: 205 VMQFKGFTKLVDMWSAGCVMAEMFNRKA 232
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 17/205 (8%)
Query: 352 EVLGKGSVGTSYKA-VLEEGTTVVVKRLKEVAVGKRE----FEMQMEVLGKIKHDNVVPL 406
++LG+GS T A L +K L++ + K + +V+ ++ H V L
Sbjct: 14 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 73
Query: 407 RAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSG 466
F + DEKL Y + LL R G D L +LH G
Sbjct: 74 -YFTFQDDEKL--YFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYLHGKG 128
Query: 467 KIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTR------VAGYRAPEVVETRKV 520
I+H ++K NILL D ++DFG + + R A Y +PE++ +
Sbjct: 129 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 187
Query: 521 TFKSDVYSFGVLLLELLTGKAPNQA 545
SD+++ G ++ +L+ G P +A
Sbjct: 188 CKSSDLWALGCIIYQLVAGLPPFRA 212
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 120/284 (42%), Gaps = 36/284 (12%)
Query: 353 VLGKGSVGTSYKAVLEE-GTTVVVKRLKEVAVGK--REFEM-QMEVLGKIKHDNVVPLRA 408
++G+GS G K ++ G V +K+ E K ++ M ++++L +++H+N+V L
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 409 FYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKI 468
K LV++++ L L G LD+ + G+ H S I
Sbjct: 92 VCKKKKRWYLVFEFVDHTILDDLELFPNG-----LDYQVVQKYLFQIINGIGFCH-SHNI 145
Query: 469 VHGNIKASNILLRPDHDACVSDFGLNPLFGNT-TPPTRVAG-------YRAPE-VVETRK 519
+H +IK NIL+ + DFG F T P V YRAPE +V K
Sbjct: 146 IHRDIKPENILVSQSGVVKLCDFG----FARTLAAPGEVYDDEVATRWYRAPELLVGDVK 201
Query: 520 VTFKSDVYSFGVLLLELLTGKA--PNQASLGE-------EGIDLPRWVQSVVREEWTAEV 570
DV++ G L+ E+ G+ P + + + G +PR + + A V
Sbjct: 202 YGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGV 261
Query: 571 FDVELMRYHNIEEEMVQL----LQIAMGCVSTVPDQRPAMQEVV 610
E+ +E +L + +A C+ PD+RP E++
Sbjct: 262 RLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELL 305
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Query: 457 RGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL----NPLFGNT---TPPTRVAGY 509
RGL ++H S ++H ++K SN+LL D + DFGL +P +T T Y
Sbjct: 137 RGLKYIH-SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY 195
Query: 510 RAPEVVETRKVTFKS-DVYSFGVLLLELLTGK 540
RAPE++ K KS D++S G +L E+L+ +
Sbjct: 196 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 17/205 (8%)
Query: 352 EVLGKGSVGTSYKA-VLEEGTTVVVKRLKEVAVGKRE----FEMQMEVLGKIKHDNVVPL 406
++LG+GS T A L +K L++ + K + +V+ ++ H V L
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 407 RAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSG 466
F + DEKL Y + LL R G D L +LH G
Sbjct: 98 -YFTFQDDEKL--YFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYLHGKG 152
Query: 467 KIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRV------AGYRAPEVVETRKV 520
I+H ++K NILL D ++DFG + + R A Y +PE++ +
Sbjct: 153 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 521 TFKSDVYSFGVLLLELLTGKAPNQA 545
SD+++ G ++ +L+ G P +A
Sbjct: 212 CKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 17/205 (8%)
Query: 352 EVLGKGSVGTSYKA-VLEEGTTVVVKRLKEVAVGKRE----FEMQMEVLGKIKHDNVVPL 406
++LG+GS T A L +K L++ + K + +V+ ++ H V L
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 407 RAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSG 466
F + DEKL Y + LL R G D L +LH G
Sbjct: 98 -YFTFQDDEKL--YFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYLHGKG 152
Query: 467 KIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRV------AGYRAPEVVETRKV 520
I+H ++K NILL D ++DFG + + R A Y +PE++ +
Sbjct: 153 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 521 TFKSDVYSFGVLLLELLTGKAPNQA 545
SD+++ G ++ +L+ G P +A
Sbjct: 212 CKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 17/205 (8%)
Query: 352 EVLGKGSVGTSYKA-VLEEGTTVVVKRLKEVAVGKRE----FEMQMEVLGKIKHDNVVPL 406
++LG+GS T A L +K L++ + K + +V+ ++ H V L
Sbjct: 35 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 94
Query: 407 RAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSG 466
F + DEKL Y + LL R G D L +LH G
Sbjct: 95 -YFTFQDDEKL--YFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYLHGKG 149
Query: 467 KIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRV------AGYRAPEVVETRKV 520
I+H ++K NILL D ++DFG + + R A Y +PE++ +
Sbjct: 150 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 208
Query: 521 TFKSDVYSFGVLLLELLTGKAPNQA 545
SD+++ G ++ +L+ G P +A
Sbjct: 209 CKSSDLWALGCIIYQLVAGLPPFRA 233
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 17/205 (8%)
Query: 352 EVLGKGSVGTSYKA-VLEEGTTVVVKRLKEVAVGKRE----FEMQMEVLGKIKHDNVVPL 406
++LG+GS T A L +K L++ + K + +V+ ++ H V L
Sbjct: 39 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 98
Query: 407 RAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSG 466
F + DEKL Y + LL R G D L +LH G
Sbjct: 99 -YFTFQDDEKL--YFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYLHGKG 153
Query: 467 KIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRV------AGYRAPEVVETRKV 520
I+H ++K NILL D ++DFG + + R A Y +PE++ +
Sbjct: 154 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 212
Query: 521 TFKSDVYSFGVLLLELLTGKAPNQA 545
SD+++ G ++ +L+ G P +A
Sbjct: 213 CKSSDLWALGCIIYQLVAGLPPFRA 237
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 17/205 (8%)
Query: 352 EVLGKGSVGTSYKA-VLEEGTTVVVKRLKEVAVGKRE----FEMQMEVLGKIKHDNVVPL 406
++LG+GS T A L +K L++ + K + +V+ ++ H V L
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 407 RAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSG 466
F + DEKL Y + LL R G D L +LH G
Sbjct: 96 Y-FTFQDDEKL--YFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYLHGKG 150
Query: 467 KIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRV------AGYRAPEVVETRKV 520
I+H ++K NILL D ++DFG + + R A Y +PE++ +
Sbjct: 151 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSA 209
Query: 521 TFKSDVYSFGVLLLELLTGKAPNQA 545
SD+++ G ++ +L+ G P +A
Sbjct: 210 CKSSDLWALGCIIYQLVAGLPPFRA 234
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 24/210 (11%)
Query: 345 DLLRASAEVLGKGSVGTSYKAVLEEGTTV-VVKRLKEVAVGKRE----FEMQMEVLGKIK 399
DLLR V+G+GS L++ + +K +K+ V E + + V +
Sbjct: 8 DLLR----VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 63
Query: 400 -HDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARG 458
H +V L + + ++ V +Y+ G L + H R + L ++ + +
Sbjct: 64 NHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQR---QRKLPEEHARFYSAEISLA 118
Query: 459 LAHLHVSGKIVHGNIKASNILLRPDHDACVSDFG-----LNPLFGNTTPP-TRVAGYRAP 512
L +LH G I++ ++K N+LL + ++D+G L P G+TT Y AP
Sbjct: 119 LNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP--GDTTSXFCGTPNYIAP 175
Query: 513 EVVETRKVTFKSDVYSFGVLLLELLTGKAP 542
E++ F D ++ GVL+ E++ G++P
Sbjct: 176 EILRGEDYGFSVDWWALGVLMFEMMAGRSP 205
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 17/205 (8%)
Query: 352 EVLGKGSVGTSYKA-VLEEGTTVVVKRLKEVAVGKRE----FEMQMEVLGKIKHDNVVPL 406
++LG+GS T A L +K L++ + K + +V+ ++ H V L
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 407 RAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSG 466
F + DEKL Y + LL R G D L +LH G
Sbjct: 98 -YFTFQDDEKL--YFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYLHGKG 152
Query: 467 KIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRV------AGYRAPEVVETRKV 520
I+H ++K NILL D ++DFG + + R A Y +PE++ +
Sbjct: 153 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 521 TFKSDVYSFGVLLLELLTGKAPNQA 545
SD+++ G ++ +L+ G P +A
Sbjct: 212 CKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 17/205 (8%)
Query: 352 EVLGKGSVGTSYKA-VLEEGTTVVVKRLKEVAVGKRE----FEMQMEVLGKIKHDNVVPL 406
++LG+GS T A L +K L++ + K + +V+ ++ H V L
Sbjct: 41 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 100
Query: 407 RAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSG 466
F + DEKL Y + LL R G D L +LH G
Sbjct: 101 Y-FTFQDDEKL--YFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYLHGKG 155
Query: 467 KIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRV------AGYRAPEVVETRKV 520
I+H ++K NILL D ++DFG + + R A Y +PE++ +
Sbjct: 156 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 214
Query: 521 TFKSDVYSFGVLLLELLTGKAPNQA 545
SD+++ G ++ +L+ G P +A
Sbjct: 215 CKSSDLWALGCIIYQLVAGLPPFRA 239
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 92/217 (42%), Gaps = 33/217 (15%)
Query: 351 AEVLGKGSVGTSYKAVLEE-GTTVVVKR------LKEVAVGKREFEMQMEVLGKIKHDNV 403
+++LG+G+ ++ ++ G +K L+ V V REFE VL K+ H N+
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFE----VLKKLNHKNI 69
Query: 404 VPLRAF--YYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIAL-SAARGLA 460
V L A + K+L+ ++ P GSL +L + P ++ I L G+
Sbjct: 70 VKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLP---ESEFLIVLRDVVGGMN 126
Query: 461 HLHVSGKIVHGNIKASNILLRPDHDAC----VSDFGLNPLFGNTTPPTRVAG---YRAPE 513
HL +G IVH NIK NI+ D ++DFG + + G Y P+
Sbjct: 127 HLRENG-IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPD 185
Query: 514 VVE--------TRKVTFKSDVYSFGVLLLELLTGKAP 542
+ E +K D++S GV TG P
Sbjct: 186 MYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
Score = 32.7 bits (73), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 19/101 (18%)
Query: 404 VPLRAFYYSKDEKLLVYDYM---PAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLA 460
+P R F + K ++Y + P+G++S + G P+DW M ++ S +RGL
Sbjct: 221 LPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENG----PIDWSGDMPVSCSLSRGLQ 276
Query: 461 HLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTT 501
L V NI L D + C +G + F T+
Sbjct: 277 VLLTP---VLANI------LEADQEKC---WGFDQFFAETS 305
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 74/163 (45%), Gaps = 24/163 (14%)
Query: 391 QMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALL--HGSRGSGRTPLDWDNR 448
++ + + H N+V L ++ LV +Y G + L HG +
Sbjct: 63 EVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEA----RAK 118
Query: 449 MRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNP--LFGNT------ 500
R +SA + + H IVH ++KA N+LL D + ++DFG + FGN
Sbjct: 119 FRQIVSAVQ---YCH-QKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCG 174
Query: 501 TPPTRVAGYRAPEVVETRKVTF-KSDVYSFGVLLLELLTGKAP 542
PP Y APE+ + +K + DV+S GV+L L++G P
Sbjct: 175 APP-----YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 95/215 (44%), Gaps = 34/215 (15%)
Query: 345 DLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIK----- 399
DLLR V+G+GS L++ R+ + V K+E E + ++
Sbjct: 12 DLLR----VIGRGSYAKVLLVRLKK-----TDRIYAMKVVKKELVNDDEDIDWVQTEKHV 62
Query: 400 ------HDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIAL 453
H +V L + + ++ V +Y+ G L + H R + P + +
Sbjct: 63 FEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQR-QRKLPEEHARFYSAEI 119
Query: 454 SAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFG-----LNPLFGNTTPP-TRVA 507
S A L +LH G I++ ++K N+LL + ++D+G L P G+TT
Sbjct: 120 SLA--LNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP--GDTTSXFCGTP 174
Query: 508 GYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAP 542
Y APE++ F D ++ GVL+ E++ G++P
Sbjct: 175 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSP 209
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 89/195 (45%), Gaps = 13/195 (6%)
Query: 354 LGKGSVGTSYKAVLEE-GTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVVPLRA 408
+G G+ G+ A+ + G V +K+L + KR + ++ +L ++H+NV+ L
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYR-ELLLLKHMQHENVIGLLD 108
Query: 409 FYYSKDEKLLVYD-YMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGK 467
+ YD Y+ + L G + + +GL ++H +G
Sbjct: 109 VFTPASSLRNFYDFYLVMPFMQTDLQKIMG---MEFSEEKIQYLVYQMLKGLKYIHSAG- 164
Query: 468 IVHGNIKASNILLRPDHDACVSDFGL-NPLFGNTTPPTRVAGYRAPEVVETRKVTFKS-D 525
+VH ++K N+ + D + + DFGL T YRAPEV+ + ++ D
Sbjct: 165 VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVD 224
Query: 526 VYSFGVLLLELLTGK 540
++S G ++ E+LTGK
Sbjct: 225 IWSVGCIMAEMLTGK 239
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 76/162 (46%), Gaps = 19/162 (11%)
Query: 391 QMEVLGKIKHDNVV----PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWD 446
++++L + +H+N++ +RA + + + + + L LL S D
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN------D 128
Query: 447 NRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL----NPLFGNT-- 500
+ RGL ++H S ++H ++K SN+LL D + DFGL +P +T
Sbjct: 129 HICYFLYQILRGLKYIH-SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 187
Query: 501 -TPPTRVAGYRAPEVVETRKVTFKS-DVYSFGVLLLELLTGK 540
YRAPE++ K KS D++S G +L E+L+ +
Sbjct: 188 LXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 76/162 (46%), Gaps = 19/162 (11%)
Query: 391 QMEVLGKIKHDNVV----PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWD 446
++++L + +H+N++ +RA + + + + + L LL S D
Sbjct: 76 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN------D 129
Query: 447 NRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL----NPLFGNT-- 500
+ RGL ++H S ++H ++K SN+LL D + DFGL +P +T
Sbjct: 130 HICYFLYQILRGLKYIH-SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 188
Query: 501 -TPPTRVAGYRAPEVVETRKVTFKS-DVYSFGVLLLELLTGK 540
YRAPE++ K KS D++S G +L E+L+ +
Sbjct: 189 LXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 81/180 (45%), Gaps = 25/180 (13%)
Query: 376 KRLKEV-AVGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHG 434
++L+EV +RE + +V G H +++ L Y S LV+D M G L L
Sbjct: 137 EQLEEVREATRRETHILRQVAG---HPHIITLIDSYESSSFMFLVFDLMRKGELFDYL-- 191
Query: 435 SRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLN 494
+ + L I S ++ LH + IVH ++K NILL + +SDFG +
Sbjct: 192 ---TEKVALSEKETRSIMRSLLEAVSFLH-ANNIVHRDLKPENILLDDNMQIRLSDFGFS 247
Query: 495 PLFGNTTPPTRV------AGYRAPEVV-----ETRKVTFKS-DVYSFGVLLLELLTGKAP 542
+ P ++ GY APE++ ET K D+++ GV+L LL G P
Sbjct: 248 ---CHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPP 304
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 99/224 (44%), Gaps = 32/224 (14%)
Query: 337 GVYSFDLEDLLRASAEVLGKGSVGTSYKAVL----EEGTTVVVKRLKEVAVGKR-----E 387
G+ +F+L +VLG G+ G + + G +K LK+ + ++
Sbjct: 52 GIENFEL-------LKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEH 104
Query: 388 FEMQMEVLGKIKHDNVVPLRAFYYSKDEKL-LVYDYMPAGSLSALLHGSRGSGRTPLDWD 446
+ +VL I+ + + + + KL L+ DY+ G L H S+ T +
Sbjct: 105 TRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGEL--FTHLSQRERFT----E 158
Query: 447 NRMRIAL-SAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLF--GNTTPP 503
+ ++I + L HLH G I++ +IK NILL + ++DFGL+ F T
Sbjct: 159 HEVQIYVGEIVLALEHLHKLG-IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERA 217
Query: 504 TRVAG---YRAPEVVETRKVTFKS--DVYSFGVLLLELLTGKAP 542
G Y AP++V D +S GVL+ ELLTG +P
Sbjct: 218 YDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 16/161 (9%)
Query: 391 QMEVLGKIKHDNVVPLRAFYY--SKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNR 448
++ +L K+ H NVV L ++D +V++ + G + + PL D
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV------PTLKPLSEDQA 139
Query: 449 MRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL-NPLFGNTTPPTRVA 507
+G+ +LH KI+H +IK SN+L+ D ++DFG+ N G+ +
Sbjct: 140 RFYFQDLIKGIEYLHYQ-KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTV 198
Query: 508 G---YRAPE-VVETRKVTFKS--DVYSFGVLLLELLTGKAP 542
G + APE + ETRK+ DV++ GV L + G+ P
Sbjct: 199 GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 87/202 (43%), Gaps = 20/202 (9%)
Query: 353 VLGKGSVG----TSYKAVLEEGTTVVVKRLKEVAVGKREFEMQM---EVLGKI-KHDNVV 404
VLGKGS G K E ++K K+V + + E M VL + K +
Sbjct: 26 VLGKGSFGKVMLADRKGTEELYAIKILK--KDVVIQDDDVECTMVEKRVLALLDKPPFLT 83
Query: 405 PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
L + + + D V +Y+ G L + G + P + A + GL LH
Sbjct: 84 QLHSCFQTVDRLYFVMEYVNGGDLMYHIQ-QVGKFKEP----QAVFYAAEISIGLFFLHK 138
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTR----VAGYRAPEVVETRKV 520
G I++ ++K N++L + ++DFG+ TR Y APE++ +
Sbjct: 139 RG-IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPY 197
Query: 521 TFKSDVYSFGVLLLELLTGKAP 542
D +++GVLL E+L G+ P
Sbjct: 198 GKSVDWWAYGVLLYEMLAGQPP 219
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 84/206 (40%), Gaps = 25/206 (12%)
Query: 352 EVLGKGSVGTSYKAVL----EEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLR 407
E LGKG+ + V +E +++ K A ++ E + + +KH N+V L
Sbjct: 17 EELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 76
Query: 408 AFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGK 467
+ L++D + G L + D + ++ L A + H H G
Sbjct: 77 DSISEEGHHYLIFDLVTGGELFEDIVAREYYSEA--DASHCIQQILEA---VLHCHQMG- 130
Query: 468 IVHGNIKASNILLRPDHDAC---VSDFGL--------NPLFGNTTPPTRVAGYRAPEVVE 516
+VH N+K N+LL ++DFGL FG P GY +PEV+
Sbjct: 131 VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTP----GYLSPEVLR 186
Query: 517 TRKVTFKSDVYSFGVLLLELLTGKAP 542
D+++ GV+L LL G P
Sbjct: 187 KDPYGKPVDLWACGVILYILLVGYPP 212
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 80/192 (41%), Gaps = 26/192 (13%)
Query: 370 GTTVVVKRLKEVAVGKRE---FEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAG 426
G V V+R+ A + ++ V H N+VP RA + + +E +V +M G
Sbjct: 52 GEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYG 111
Query: 427 SLSALLHGSRGSGRTPLDWDNRMRIAL---SAARGLAHLHVSGKIVHGNIKASNILLRPD 483
S L+ +D N + IA + L ++H G VH ++KAS+IL+ D
Sbjct: 112 SAKDLICTHF------MDGMNELAIAYILQGVLKALDYIHHMG-YVHRSVKASHILISVD 164
Query: 484 HDACVSDFGLNPLFGNTTPPTRVAG-----------YRAPEVVETRKVTF--KSDVYSFG 530
+S N + RV + +PEV++ + KSD+YS G
Sbjct: 165 GKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVG 224
Query: 531 VLLLELLTGKAP 542
+ EL G P
Sbjct: 225 ITACELANGHVP 236
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 90/195 (46%), Gaps = 13/195 (6%)
Query: 354 LGKGSVGTSYKAVLEE-GTTVVVKRL----KEVAVGKREFEMQMEVLGKIKHDNVVPLRA 408
+G G+ G+ A+ + G V +K+L + KR + ++ +L ++H+NV+ L
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYR-ELLLLKHMQHENVIGLLD 90
Query: 409 FYYSKDEKLLVYD-YMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGK 467
+ YD Y+ + L G + + + +GL ++H +G
Sbjct: 91 VFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSE---EKIQYLVYQMLKGLKYIHSAG- 146
Query: 468 IVHGNIKASNILLRPDHDACVSDFGL-NPLFGNTTPPTRVAGYRAPEVVETRKVTFKS-D 525
+VH ++K N+ + D + + DFGL T YRAPEV+ + ++ D
Sbjct: 147 VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVD 206
Query: 526 VYSFGVLLLELLTGK 540
++S G ++ E+LTGK
Sbjct: 207 IWSVGCIMAEMLTGK 221
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 102/239 (42%), Gaps = 25/239 (10%)
Query: 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFE-----MQMEVLGKIKHDNVVPLRA 408
LG+G+ T YK + +V LKE+ + E ++ +L +KH N+V L
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVA--LKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHD 67
Query: 409 FYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKI 468
+++ LV++Y+ L ++ N RGLA+ H K+
Sbjct: 68 IIHTEKSLTLVFEYLDKD-----LKQYLDDCGNIINMHNVKLFLFQLLRGLAYCH-RQKV 121
Query: 469 VHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-------YRAPEV-VETRKV 520
+H ++K N+L+ + ++DFGL + PT+ YR P++ + +
Sbjct: 122 LHRDLKPQNLLINERGELKLADFGLA---RAKSIPTKTYDNEVVTLWYRPPDILLGSTDY 178
Query: 521 TFKSDVYSFGVLLLELLTGKAPNQASLGEEGID-LPRWVQSVVREEWTAEVFDVELMRY 578
+ + D++ G + E+ TG+ S EE + + R + + E W + + E Y
Sbjct: 179 STQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTY 237
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 80/192 (41%), Gaps = 26/192 (13%)
Query: 370 GTTVVVKRLKEVAVGKRE---FEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAG 426
G V V+R+ A + ++ V H N+VP RA + + +E +V +M G
Sbjct: 36 GEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYG 95
Query: 427 SLSALLHGSRGSGRTPLDWDNRMRIAL---SAARGLAHLHVSGKIVHGNIKASNILLRPD 483
S L+ +D N + IA + L ++H G VH ++KAS+IL+ D
Sbjct: 96 SAKDLICTHF------MDGMNELAIAYILQGVLKALDYIHHMG-YVHRSVKASHILISVD 148
Query: 484 HDACVSDFGLNPLFGNTTPPTRVAG-----------YRAPEVVETRKVTF--KSDVYSFG 530
+S N + RV + +PEV++ + KSD+YS G
Sbjct: 149 GKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVG 208
Query: 531 VLLLELLTGKAP 542
+ EL G P
Sbjct: 209 ITACELANGHVP 220
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 90/205 (43%), Gaps = 25/205 (12%)
Query: 352 EVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEM------QMEVLGKIKHDNVVP 405
E +G+G+ GT +KA E +V LK V + + + ++ +L ++KH N+V
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVA--LKRVRLDDDDEGVPSSALREICLLKELKHKNIVR 65
Query: 406 LRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
L +S + LV+++ L G LD + +GL H S
Sbjct: 66 LHDVLHSDKKLTLVFEFC-DQDLKKYFDSCNGD----LDPEIVKSFLFQLLKGLGFCH-S 119
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG-------YRAPEVVETR 518
++H ++K N+L+ + + +++FGL FG P R YR P+V+
Sbjct: 120 RNVLHRDLKPQNLLINRNGELKLANFGLARAFGI---PVRCYSAEVVTLWYRPPDVLFGA 176
Query: 519 KVTFKS-DVYSFGVLLLELLTGKAP 542
K+ S D++S G + EL P
Sbjct: 177 KLYSTSIDMWSAGCIFAELANAGRP 201
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 88/211 (41%), Gaps = 26/211 (12%)
Query: 351 AEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVA-------VGKREFEMQMEVLGKIKHDNV 403
EV+GKG+ + + E ++ +VA + + + + + +KH ++
Sbjct: 29 CEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHI 88
Query: 404 VPLRAFYYSKDEKLLVYDYMPAGSLS--ALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
V L Y S +V+++M L + G + + MR L A R +
Sbjct: 89 VELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALR---Y 145
Query: 462 LHVSGKIVHGNIKASNILLRPDHDAC---VSDFGLNPLFGNTTPPTRVAGYR-------A 511
H I+H ++K N+LL ++ + DFG+ G + VAG R A
Sbjct: 146 CH-DNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESG---LVAGGRVGTPHFMA 201
Query: 512 PEVVETRKVTFKSDVYSFGVLLLELLTGKAP 542
PEVV+ DV+ GV+L LL+G P
Sbjct: 202 PEVVKREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 95/223 (42%), Gaps = 33/223 (14%)
Query: 335 EGGVYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVK--RLKEVAVGKRE---FE 389
+G FD+E +G+GS T YK L+ TTV V L++ + K E F+
Sbjct: 24 DGRFLKFDIE---------IGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQRFK 73
Query: 390 MQMEVLGKIKHDNVVPLRAFYYS----KDEKLLVYDYMPAGSLSALLHGSRGSGRTPL-D 444
+ E L ++H N+V + S K +LV + +G+L L + L
Sbjct: 74 EEAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRS 133
Query: 445 WDNRMRIALSAARGLAHLHV-SGKIVHGNIKASNILLR-PDHDACVSDFGLNPLFGNTTP 502
W ++ +GL LH + I+H ++K NI + P + D GL L +
Sbjct: 134 WCRQI------LKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL-KRASF 186
Query: 503 PTRVAG---YRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAP 542
V G + APE E K DVY+FG LE T + P
Sbjct: 187 AKAVIGTPEFXAPEXYE-EKYDESVDVYAFGXCXLEXATSEYP 228
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 29/207 (14%)
Query: 353 VLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAVGKREFEM----QMEVLGKIKHDNVVPLR 407
+LG+G+ G A + G V +K+++ K F + ++++L KH+N++ +
Sbjct: 18 LLGEGAYGVVCSATHKPTGEIVAIKKIE--PFDKPLFALRTLREIKILKHFKHENIITI- 74
Query: 408 AFYYSKDEKLLVYD--YMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
F + + ++ Y+ + LH R L D+ R + LH S
Sbjct: 75 -FNIQRPDSFENFNEVYIIQELMQTDLH--RVISTQMLSDDHIQYFIYQTLRAVKVLHGS 131
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLF-----GNTTPPTRVAG---------YRA 511
++H ++K SN+L+ + D V DFGL + N+ P + +G YRA
Sbjct: 132 N-VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRA 190
Query: 512 PEVVETR-KVTFKSDVYSFGVLLLELL 537
PEV+ T K + DV+S G +L EL
Sbjct: 191 PEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 29/207 (14%)
Query: 353 VLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAVGKREFEM----QMEVLGKIKHDNVVPLR 407
+LG+G+ G A + G V +K+++ K F + ++++L KH+N++ +
Sbjct: 18 LLGEGAYGVVCSATHKPTGEIVAIKKIE--PFDKPLFALRTLREIKILKHFKHENIITI- 74
Query: 408 AFYYSKDEKLLVYD--YMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
F + + ++ Y+ + LH R L D+ R + LH S
Sbjct: 75 -FNIQRPDSFENFNEVYIIQELMQTDLH--RVISTQMLSDDHIQYFIYQTLRAVKVLHGS 131
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLF-----GNTTPPTRVAG---------YRA 511
++H ++K SN+L+ + D V DFGL + N+ P + +G YRA
Sbjct: 132 N-VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRA 190
Query: 512 PEVVETR-KVTFKSDVYSFGVLLLELL 537
PEV+ T K + DV+S G +L EL
Sbjct: 191 PEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 29/207 (14%)
Query: 353 VLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAVGKREFEM----QMEVLGKIKHDNVVPLR 407
+LG+G+ G A + G V +K+++ K F + ++++L KH+N++ +
Sbjct: 18 LLGEGAYGVVCSATHKPTGEIVAIKKIE--PFDKPLFALRTLREIKILKHFKHENIITI- 74
Query: 408 AFYYSKDEKLLVYD--YMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
F + + ++ Y+ + LH R L D+ R + LH S
Sbjct: 75 -FNIQRPDSFENFNEVYIIQELMQTDLH--RVISTQMLSDDHIQYFIYQTLRAVKVLHGS 131
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGLNPLF-----GNTTPPTRVAG---------YRA 511
++H ++K SN+L+ + D V DFGL + N+ P + +G YRA
Sbjct: 132 N-VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRA 190
Query: 512 PEVVETR-KVTFKSDVYSFGVLLLELL 537
PEV+ T K + DV+S G +L EL
Sbjct: 191 PEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 129/308 (41%), Gaps = 39/308 (12%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRLKEVA---VGKREFEMQMEVLGKIKHDNVVPLRAF 409
+G+GS G +K + G V +K+ E V K+ ++ +L ++KH N+V L
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 410 YYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIV 469
+ K LV++Y L L RG P + A H H +
Sbjct: 71 FRRKRRLHLVFEYCDHTVLHELDRYQRG---VPEHLVKSITWQTLQAVNFCHKH---NCI 124
Query: 470 HGNIKASNILLRPDHDACVSDFGLNPL------FGNTTPPTRVAGYRAPE-VVETRKVTF 522
H ++K NIL+ + DFG L + + TR YR+PE +V +
Sbjct: 125 HRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATR--WYRSPELLVGDTQYGP 182
Query: 523 KSDVYSFGVLLLELLTGKA--PNQASLGE-------EGIDLPRWVQSVVREEWTA--EVF 571
DV++ G + ELL+G P ++ + + G +PR Q ++ + ++
Sbjct: 183 PVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIP 242
Query: 572 DVELM-----RYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGETDDGLR 626
D E M ++ NI + LL+ GC+ P +R ++++ N E +D L
Sbjct: 243 DPEDMEPLELKFPNISYPALGLLK---GCLHMDPTERLTCEQLLHHPYFENIREIED-LA 298
Query: 627 QSSDDPSK 634
+ D P++
Sbjct: 299 KEHDKPAE 306
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 85/184 (46%), Gaps = 15/184 (8%)
Query: 369 EGTTVVVKRLK--EVAVGK-REFEMQMEVLGKIKHDNVVPLRAFYYSKD--EKLLVYDYM 423
+G +VVK LK + + K R+F + L H NV+P+ S L+ +
Sbjct: 32 QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWX 91
Query: 424 PAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGN-IKASNILLRP 482
P GSL +LH G+ +D ++ AL ARG A LH ++ + + + ++ +
Sbjct: 92 PYGSLYNVLH--EGTNFV-VDQSQAVKFALDXARGXAFLHTLEPLIPRHALNSRSVXIDE 148
Query: 483 DHDACVSDFGLNPLFGNTTPPTRVA-GYRAPEVVETRKVTF---KSDVYSFGVLLLELLT 538
D A +S + F +P A + APE ++ + +D +SF VLL EL+T
Sbjct: 149 DXTARISXADVK--FSFQSPGRXYAPAWVAPEALQKKPEDTNRRSADXWSFAVLLWELVT 206
Query: 539 GKAP 542
+ P
Sbjct: 207 REVP 210
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 125/330 (37%), Gaps = 80/330 (24%)
Query: 336 GGVYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQ---- 391
GG D D + + E+ G + + VL EG V ++V G RE+ ++
Sbjct: 8 GGASGRDQSDFVGQTVEL---GELRLRVRRVLAEGGFAFVYEAQDVGSG-REYALKRLLS 63
Query: 392 ----------MEVLGKIK---HDNVVPL-RAFYYSKDE------KLLVYDYMPAGSLSAL 431
EV K H N+V A K+E + L+ + G L
Sbjct: 64 NEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEF 123
Query: 432 LHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGK-IVHGNIKASNILLRPDHDACVSD 490
L + R PL D ++I R + H+H I+H ++K N+LL + D
Sbjct: 124 L--KKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCD 181
Query: 491 FGL---------------------NPLFGNTTPPTRVAGYRAPEVVETRK---VTFKSDV 526
FG + NTTP YR PE+++ + K D+
Sbjct: 182 FGSATTISHYPDYSWSAQRRALVEEEITRNTTP-----MYRTPEIIDLYSNFPIGEKQDI 236
Query: 527 YSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMV 586
++ G +L L + P E+G L +V +++ D + +H++ M+
Sbjct: 237 WALGCILYLLCFRQHPF-----EDGAKL-----RIVNGKYSIPPHDTQYTVFHSLIRAML 286
Query: 587 QLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616
Q+ P++R ++ EVV ++ +
Sbjct: 287 QV----------NPEERLSIAEVVHQLQEI 306
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 457 RGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVA---GYRAPE 513
RGL LH S ++VH ++K NIL+ ++DFGL ++ T V YRAPE
Sbjct: 131 RGLDFLH-SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPE 189
Query: 514 VVETRKVTFKSDVYSFGVLLLELLTGK 540
V+ D++S G + E+ K
Sbjct: 190 VLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 457 RGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVA---GYRAPE 513
RGL LH S ++VH ++K NIL+ ++DFGL ++ T V YRAPE
Sbjct: 131 RGLDFLH-SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPE 189
Query: 514 VVETRKVTFKSDVYSFGVLLLELLTGK 540
V+ D++S G + E+ K
Sbjct: 190 VLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 93/208 (44%), Gaps = 33/208 (15%)
Query: 353 VLGKGSVGTSYKA---VLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDN-----VV 404
++GKGS G KA V +E + + + K+ + + + E+++ L KHD +V
Sbjct: 61 LIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMN-KHDTEMKYYIV 119
Query: 405 PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
L+ + ++ LV++ M + +L LL + G ++L+ R A
Sbjct: 120 HLKRHFMFRNHLCLVFE-MLSYNLYDLLRNTNFRG-----------VSLNLTRKFAQQMC 167
Query: 465 SG---------KIVHGNIKASNILL-RPDHDAC-VSDFGLNPLFGN-TTPPTRVAGYRAP 512
+ I+H ++K NILL P A + DFG + G + YR+P
Sbjct: 168 TALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSRFYRSP 227
Query: 513 EVVETRKVTFKSDVYSFGVLLLELLTGK 540
EV+ D++S G +L+E+ TG+
Sbjct: 228 EVLLGMPYDLAIDMWSLGCILVEMHTGE 255
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 457 RGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVA---GYRAPE 513
RGL LH S ++VH ++K NIL+ ++DFGL ++ T V YRAPE
Sbjct: 131 RGLDFLH-SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPE 189
Query: 514 VVETRKVTFKSDVYSFGVLLLELLTGK 540
V+ D++S G + E+ K
Sbjct: 190 VLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 95/200 (47%), Gaps = 19/200 (9%)
Query: 352 EVLGKGSVGTSYKAVLEE-GTTVVVKRLKEVAVGKREFEMQMEVLGKIKHD------NVV 404
+V+GKGS G KA + V +K ++ R+ ++ +L ++ NV+
Sbjct: 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVI 162
Query: 405 PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRT-PLDWDNRMRIALSAARGLAHLH 463
+ + ++ + ++ + + +L L+ ++ G + PL + A S + L LH
Sbjct: 163 HMLENFTFRNHICMTFELL-SMNLYELIKKNKFQGFSLPL----VRKFAHSILQCLDALH 217
Query: 464 VSGKIVHGNIKASNILLRPDHDACVS--DFGLNPLFGNTTPPTRVAG--YRAPEVVETRK 519
+I+H ++K NILL+ + + DFG + + + T + YRAPEV+ +
Sbjct: 218 -KNRIIHCDLKPENILLKQQGRSGIKVIDFG-SSCYEHQRVYTXIQSRFYRAPEVILGAR 275
Query: 520 VTFKSDVYSFGVLLLELLTG 539
D++S G +L ELLTG
Sbjct: 276 YGMPIDMWSLGCILAELLTG 295
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 93/208 (44%), Gaps = 33/208 (15%)
Query: 353 VLGKGSVGT---SYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDN-----VV 404
++GKGS G +Y V +E + + + K+ + + + E+++ L KHD +V
Sbjct: 42 LIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMN-KHDTEMKYYIV 100
Query: 405 PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
L+ + ++ LV++ M + +L LL + G ++L+ R A
Sbjct: 101 HLKRHFMFRNHLCLVFE-MLSYNLYDLLRNTNFRG-----------VSLNLTRKFAQQMC 148
Query: 465 SG---------KIVHGNIKASNILL-RPDHDAC-VSDFGLNPLFGNTT-PPTRVAGYRAP 512
+ I+H ++K NILL P A + DFG + G + YR+P
Sbjct: 149 TALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSRFYRSP 208
Query: 513 EVVETRKVTFKSDVYSFGVLLLELLTGK 540
EV+ D++S G +L+E+ TG+
Sbjct: 209 EVLLGMPYDLAIDMWSLGCILVEMHTGE 236
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 95/200 (47%), Gaps = 19/200 (9%)
Query: 352 EVLGKGSVGTSYKAVLEE-GTTVVVKRLKEVAVGKREFEMQMEVLGKIKHD------NVV 404
+V+GKGS G KA + V +K ++ R+ ++ +L ++ NV+
Sbjct: 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVI 162
Query: 405 PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRT-PLDWDNRMRIALSAARGLAHLH 463
+ + ++ + ++ + + +L L+ ++ G + PL + A S + L LH
Sbjct: 163 HMLENFTFRNHICMTFELL-SMNLYELIKKNKFQGFSLPL----VRKFAHSILQCLDALH 217
Query: 464 VSGKIVHGNIKASNILLRPDHDACVS--DFGLNPLFGNTTPPTRVAG--YRAPEVVETRK 519
+I+H ++K NILL+ + + DFG + + + T + YRAPEV+ +
Sbjct: 218 -KNRIIHCDLKPENILLKQQGRSGIKVIDFG-SSCYEHQRVYTXIQSRFYRAPEVILGAR 275
Query: 520 VTFKSDVYSFGVLLLELLTG 539
D++S G +L ELLTG
Sbjct: 276 YGMPIDMWSLGCILAELLTG 295
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 93/208 (44%), Gaps = 33/208 (15%)
Query: 353 VLGKGSVGTSYKA---VLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDN-----VV 404
++GKGS G KA V +E + + + K+ + + + E+++ L KHD +V
Sbjct: 61 LIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMN-KHDTEMKYYIV 119
Query: 405 PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
L+ + ++ LV++ M + +L LL + G ++L+ R A
Sbjct: 120 HLKRHFMFRNHLCLVFE-MLSYNLYDLLRNTNFRG-----------VSLNLTRKFAQQMC 167
Query: 465 SG---------KIVHGNIKASNILL-RPDHDAC-VSDFGLNPLFGN-TTPPTRVAGYRAP 512
+ I+H ++K NILL P A + DFG + G + YR+P
Sbjct: 168 TALLFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQRIYQXIQSRFYRSP 227
Query: 513 EVVETRKVTFKSDVYSFGVLLLELLTGK 540
EV+ D++S G +L+E+ TG+
Sbjct: 228 EVLLGMPYDLAIDMWSLGCILVEMHTGE 255
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 89/213 (41%), Gaps = 14/213 (6%)
Query: 345 DLLRASAEVLGKGSVGTSYKAVLEEGTT--VVVKRLKEVAVGKREFEMQMEVLGKIKHDN 402
D + +++VLG G G + + + T +K L++ +RE E+
Sbjct: 23 DDYKVTSQVLGLGINGKVLQ-IFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVR 81
Query: 403 VVPLRA-FYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
+V + Y + L+V + + G L + + T + M+ S + +
Sbjct: 82 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMK---SIGEAIQY 138
Query: 462 LHVSGKIVHGNIKASNILL---RPDHDACVSDFGL---NPLFGNTTPPTRVAGYRAPEVV 515
LH S I H ++K N+L RP+ ++DFG + T P Y APEV+
Sbjct: 139 LH-SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL 197
Query: 516 ETRKVTFKSDVYSFGVLLLELLTGKAPNQASLG 548
K D++S GV++ LL G P ++ G
Sbjct: 198 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG 230
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 89/213 (41%), Gaps = 14/213 (6%)
Query: 345 DLLRASAEVLGKGSVGTSYKAVLEEGTT--VVVKRLKEVAVGKREFEMQMEVLGKIKHDN 402
D + +++VLG G G + + + T +K L++ +RE E+
Sbjct: 21 DDYKVTSQVLGLGINGKVLQ-IFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVR 79
Query: 403 VVPLRA-FYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
+V + Y + L+V + + G L + + T + M+ S + +
Sbjct: 80 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMK---SIGEAIQY 136
Query: 462 LHVSGKIVHGNIKASNILL---RPDHDACVSDFGL---NPLFGNTTPPTRVAGYRAPEVV 515
LH S I H ++K N+L RP+ ++DFG + T P Y APEV+
Sbjct: 137 LH-SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL 195
Query: 516 ETRKVTFKSDVYSFGVLLLELLTGKAPNQASLG 548
K D++S GV++ LL G P ++ G
Sbjct: 196 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG 228
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 89/213 (41%), Gaps = 14/213 (6%)
Query: 345 DLLRASAEVLGKGSVGTSYKAVLEEGTT--VVVKRLKEVAVGKREFEMQMEVLGKIKHDN 402
D + +++VLG G G + + + T +K L++ +RE E+
Sbjct: 22 DDYKVTSQVLGLGINGKVLQ-IFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVR 80
Query: 403 VVPLRA-FYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
+V + Y + L+V + + G L + + T + M+ S + +
Sbjct: 81 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMK---SIGEAIQY 137
Query: 462 LHVSGKIVHGNIKASNILL---RPDHDACVSDFGL---NPLFGNTTPPTRVAGYRAPEVV 515
LH S I H ++K N+L RP+ ++DFG + T P Y APEV+
Sbjct: 138 LH-SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL 196
Query: 516 ETRKVTFKSDVYSFGVLLLELLTGKAPNQASLG 548
K D++S GV++ LL G P ++ G
Sbjct: 197 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG 229
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 89/213 (41%), Gaps = 14/213 (6%)
Query: 345 DLLRASAEVLGKGSVGTSYKAVLEEGTT--VVVKRLKEVAVGKREFEMQMEVLGKIKHDN 402
D + +++VLG G G + + + T +K L++ +RE E+
Sbjct: 31 DDYKVTSQVLGLGINGKVLQ-IFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVR 89
Query: 403 VVPLRA-FYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
+V + Y + L+V + + G L + + T + M+ S + +
Sbjct: 90 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMK---SIGEAIQY 146
Query: 462 LHVSGKIVHGNIKASNILL---RPDHDACVSDFGL---NPLFGNTTPPTRVAGYRAPEVV 515
LH S I H ++K N+L RP+ ++DFG + T P Y APEV+
Sbjct: 147 LH-SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL 205
Query: 516 ETRKVTFKSDVYSFGVLLLELLTGKAPNQASLG 548
K D++S GV++ LL G P ++ G
Sbjct: 206 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG 238
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 15/169 (8%)
Query: 384 GKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEK--LLVYDYMPAGSLSALLHGSRGSGRT 441
G+ + ++++L +++H NV+ L Y+++++ +V +Y G L S R
Sbjct: 49 GEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEML--DSVPEKRF 106
Query: 442 PLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFG----LNPLF 497
P+ + L GL +LH G IVH +IK N+LL +S G L+P
Sbjct: 107 PVCQAHGYFCQL--IDGLEYLHSQG-IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFA 163
Query: 498 GNTTPPTRVA--GYRAPEVVETRKV--TFKSDVYSFGVLLLELLTGKAP 542
+ T T ++ PE+ FK D++S GV L + TG P
Sbjct: 164 ADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYP 212
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 89/213 (41%), Gaps = 14/213 (6%)
Query: 345 DLLRASAEVLGKGSVGTSYKAVLEEGTT--VVVKRLKEVAVGKREFEMQMEVLGKIKHDN 402
D + +++VLG G G + + + T +K L++ +RE E+
Sbjct: 17 DDYKVTSQVLGLGINGKVLQ-IFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVR 75
Query: 403 VVPLRA-FYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
+V + Y + L+V + + G L + + T + M+ S + +
Sbjct: 76 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMK---SIGEAIQY 132
Query: 462 LHVSGKIVHGNIKASNILL---RPDHDACVSDFGL---NPLFGNTTPPTRVAGYRAPEVV 515
LH S I H ++K N+L RP+ ++DFG + T P Y APEV+
Sbjct: 133 LH-SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL 191
Query: 516 ETRKVTFKSDVYSFGVLLLELLTGKAPNQASLG 548
K D++S GV++ LL G P ++ G
Sbjct: 192 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG 224
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 89/213 (41%), Gaps = 14/213 (6%)
Query: 345 DLLRASAEVLGKGSVGTSYKAVLEEGTT--VVVKRLKEVAVGKREFEMQMEVLGKIKHDN 402
D + +++VLG G G + + + T +K L++ +RE E+
Sbjct: 15 DDYKVTSQVLGLGINGKVLQ-IFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVR 73
Query: 403 VVPLRA-FYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
+V + Y + L+V + + G L + + T + M+ S + +
Sbjct: 74 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMK---SIGEAIQY 130
Query: 462 LHVSGKIVHGNIKASNILL---RPDHDACVSDFGL---NPLFGNTTPPTRVAGYRAPEVV 515
LH S I H ++K N+L RP+ ++DFG + T P Y APEV+
Sbjct: 131 LH-SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL 189
Query: 516 ETRKVTFKSDVYSFGVLLLELLTGKAPNQASLG 548
K D++S GV++ LL G P ++ G
Sbjct: 190 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG 222
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 81/206 (39%), Gaps = 25/206 (12%)
Query: 352 EVLGKGSVGTSYKAVL----EEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLR 407
E LGKG+ + + +E ++ K A ++ E + + +KH N+V L
Sbjct: 10 EELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 69
Query: 408 AFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGK 467
+ LV+D + G L + R + + H H++G
Sbjct: 70 DSISEEGFHYLVFDLVTGGELFEDI-----VAREYYSEADASHCIQQILESVNHCHLNG- 123
Query: 468 IVHGNIKASNILLRPDHDAC---VSDFGL--------NPLFGNTTPPTRVAGYRAPEVVE 516
IVH ++K N+LL ++DFGL FG P GY +PEV+
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTP----GYLSPEVLR 179
Query: 517 TRKVTFKSDVYSFGVLLLELLTGKAP 542
D+++ GV+L LL G P
Sbjct: 180 KDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 89/213 (41%), Gaps = 14/213 (6%)
Query: 345 DLLRASAEVLGKGSVGTSYKAVLEEGTT--VVVKRLKEVAVGKREFEMQMEVLGKIKHDN 402
D + +++VLG G G + + + T +K L++ +RE E+
Sbjct: 16 DDYKVTSQVLGLGINGKVLQ-IFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVR 74
Query: 403 VVPLRA-FYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
+V + Y + L+V + + G L + + T + M+ S + +
Sbjct: 75 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMK---SIGEAIQY 131
Query: 462 LHVSGKIVHGNIKASNILL---RPDHDACVSDFGL---NPLFGNTTPPTRVAGYRAPEVV 515
LH S I H ++K N+L RP+ ++DFG + T P Y APEV+
Sbjct: 132 LH-SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL 190
Query: 516 ETRKVTFKSDVYSFGVLLLELLTGKAPNQASLG 548
K D++S GV++ LL G P ++ G
Sbjct: 191 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG 223
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 89/213 (41%), Gaps = 14/213 (6%)
Query: 345 DLLRASAEVLGKGSVGTSYKAVLEEGTT--VVVKRLKEVAVGKREFEMQMEVLGKIKHDN 402
D + +++VLG G G + + + T +K L++ +RE E+
Sbjct: 15 DDYKVTSQVLGLGINGKVLQ-IFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVR 73
Query: 403 VVPLRA-FYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
+V + Y + L+V + + G L + + T + M+ S + +
Sbjct: 74 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMK---SIGEAIQY 130
Query: 462 LHVSGKIVHGNIKASNILL---RPDHDACVSDFGL---NPLFGNTTPPTRVAGYRAPEVV 515
LH S I H ++K N+L RP+ ++DFG + T P Y APEV+
Sbjct: 131 LH-SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAPEVL 189
Query: 516 ETRKVTFKSDVYSFGVLLLELLTGKAPNQASLG 548
K D++S GV++ LL G P ++ G
Sbjct: 190 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG 222
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 110/247 (44%), Gaps = 38/247 (15%)
Query: 351 AEVLGKGSVGTSYKAV-LEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAF 409
AE LG+G G ++ V T + K +K + + ++ +L +H N++ L
Sbjct: 10 AEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHES 69
Query: 410 YYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIAL--SAARGLAHLHVSGK 467
+ S +E +++++++ + ++ S + + R ++ L LH S
Sbjct: 70 FESMEELVMIFEFISGLDIFERINTS------AFELNEREIVSYVHQVCEALQFLH-SHN 122
Query: 468 IVHGNIKASNILLRPDHDACVS--DFG----LNP------LFGNTTPPTRVAGYRAPEVV 515
I H +I+ NI+ + + + +FG L P LF T P Y APEV
Sbjct: 123 IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLF--TAPE-----YYAPEVH 175
Query: 516 ETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVEL 575
+ V+ +D++S G L+ LL+G P A ++ I+ +++ E+T FD E
Sbjct: 176 QHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIE------NIMNAEYT---FDEEA 226
Query: 576 MRYHNIE 582
+ +IE
Sbjct: 227 FKEISIE 233
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 81/206 (39%), Gaps = 25/206 (12%)
Query: 352 EVLGKGSVGTSYKAVL----EEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLR 407
E LGKG+ + + +E ++ K A ++ E + + +KH N+V L
Sbjct: 10 EELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 69
Query: 408 AFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGK 467
+ LV+D + G L + R + + H H++G
Sbjct: 70 DSISEEGFHYLVFDLVTGGELFEDI-----VAREYYSEADASHCIQQILESVNHCHLNG- 123
Query: 468 IVHGNIKASNILLRPDHDAC---VSDFGL--------NPLFGNTTPPTRVAGYRAPEVVE 516
IVH ++K N+LL ++DFGL FG P GY +PEV+
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTP----GYLSPEVLR 179
Query: 517 TRKVTFKSDVYSFGVLLLELLTGKAP 542
D+++ GV+L LL G P
Sbjct: 180 KDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 87/200 (43%), Gaps = 16/200 (8%)
Query: 355 GKGSVGT-SYKAVLEEGTTVVVKR-LKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYS 412
G+G+ GT G +V +K+ +++ RE ++ M+ L + H N+V L++++Y+
Sbjct: 32 GQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQI-MQDLAVLHHPNIVQLQSYFYT 90
Query: 413 KDEKL-------LVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS 465
E+ +V +Y+P + R P L + G HL S
Sbjct: 91 LGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHL-PS 149
Query: 466 GKIVHGNIKASNILL-RPDHDACVSDFGLNPLFGNTTPPTRVAG---YRAPEVV-ETRKV 520
+ H +IK N+L+ D + DFG + P YRAPE++ +
Sbjct: 150 VNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHY 209
Query: 521 TFKSDVYSFGVLLLELLTGK 540
T D++S G + E++ G+
Sbjct: 210 TTAVDIWSVGCIFAEMMLGE 229
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 89/213 (41%), Gaps = 14/213 (6%)
Query: 345 DLLRASAEVLGKGSVGTSYKAVLEEGTT--VVVKRLKEVAVGKREFEMQMEVLGKIKHDN 402
D + +++VLG G G + + + T +K L++ +RE E+
Sbjct: 61 DDYKVTSQVLGLGINGKVLQ-IFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVR 119
Query: 403 VVPLRA-FYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
+V + Y + L+V + + G L + + T + M+ S + +
Sbjct: 120 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMK---SIGEAIQY 176
Query: 462 LHVSGKIVHGNIKASNILL---RPDHDACVSDFGL---NPLFGNTTPPTRVAGYRAPEVV 515
LH S I H ++K N+L RP+ ++DFG + T P Y APEV+
Sbjct: 177 LH-SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL 235
Query: 516 ETRKVTFKSDVYSFGVLLLELLTGKAPNQASLG 548
K D++S GV++ LL G P ++ G
Sbjct: 236 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG 268
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 89/213 (41%), Gaps = 14/213 (6%)
Query: 345 DLLRASAEVLGKGSVGTSYKAVLEEGTT--VVVKRLKEVAVGKREFEMQMEVLGKIKHDN 402
D + +++VLG G G + + + T +K L++ +RE E+
Sbjct: 17 DDYKVTSQVLGLGINGKVLQ-IFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVR 75
Query: 403 VVPLRA-FYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
+V + Y + L+V + + G L + + T + M+ S + +
Sbjct: 76 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMK---SIGEAIQY 132
Query: 462 LHVSGKIVHGNIKASNILL---RPDHDACVSDFGL---NPLFGNTTPPTRVAGYRAPEVV 515
LH S I H ++K N+L RP+ ++DFG + T P Y APEV+
Sbjct: 133 LH-SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL 191
Query: 516 ETRKVTFKSDVYSFGVLLLELLTGKAPNQASLG 548
K D++S GV++ LL G P ++ G
Sbjct: 192 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG 224
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 79/206 (38%), Gaps = 25/206 (12%)
Query: 352 EVLGKGSVGTSYKAV----LEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLR 407
E LGKG+ + V +E ++ K A ++ E + + +KH N+V L
Sbjct: 37 EELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 96
Query: 408 AFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGK 467
+ LV+D + G L + R + + H+H
Sbjct: 97 DSISEEGFHYLVFDLVTGGELFEDI-----VAREYYSEADASHCIHQILESVNHIH-QHD 150
Query: 468 IVHGNIKASNILLRPDHDAC---VSDFGL--------NPLFGNTTPPTRVAGYRAPEVVE 516
IVH ++K N+LL ++DFGL FG P GY +PEV+
Sbjct: 151 IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTP----GYLSPEVLR 206
Query: 517 TRKVTFKSDVYSFGVLLLELLTGKAP 542
D+++ GV+L LL G P
Sbjct: 207 KDPYGKPVDIWACGVILYILLVGYPP 232
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 89/213 (41%), Gaps = 14/213 (6%)
Query: 345 DLLRASAEVLGKGSVGTSYKAVLEEGTT--VVVKRLKEVAVGKREFEMQMEVLGKIKHDN 402
D + +++VLG G G + + + T +K L++ +RE E+
Sbjct: 67 DDYKVTSQVLGLGINGKVLQ-IFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVR 125
Query: 403 VVPLRA-FYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
+V + Y + L+V + + G L + + T + M+ S + +
Sbjct: 126 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMK---SIGEAIQY 182
Query: 462 LHVSGKIVHGNIKASNILL---RPDHDACVSDFGL---NPLFGNTTPPTRVAGYRAPEVV 515
LH S I H ++K N+L RP+ ++DFG + T P Y APEV+
Sbjct: 183 LH-SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL 241
Query: 516 ETRKVTFKSDVYSFGVLLLELLTGKAPNQASLG 548
K D++S GV++ LL G P ++ G
Sbjct: 242 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG 274
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 121/299 (40%), Gaps = 59/299 (19%)
Query: 339 YSFDLEDLLRASAEVLGKGSVGTSYKAV-LEEGTTVVVKRLKEVAVGKREFEMQMEVLGK 397
Y+ D E++ VLG+G+ G KA + +K+++ ++ +L
Sbjct: 4 YASDFEEI-----AVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLAS 58
Query: 398 IKHDNVVPLRAFYY-------------SKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLD 444
+ H VV A + K + +Y G+L L+H + +
Sbjct: 59 LNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEY 118
Query: 445 WDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL----------- 493
W R+ L+++H G I+H ++K NI + + + DFGL
Sbjct: 119 W----RLFRQILEALSYIHSQG-IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDIL 173
Query: 494 ----NPLFG---NTTPPTRVAGYRAPEVVE-TRKVTFKSDVYSFGVLLLELLTGKAPNQA 545
L G N T A Y A EV++ T K D+YS G++ E++
Sbjct: 174 KLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY-----PF 228
Query: 546 SLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRP 604
S G E +++ + ++SV E FD M+ +E+++++LL + P++RP
Sbjct: 229 STGMERVNILKKLRSVSIE--FPPDFDDNKMK---VEKKIIRLL------IDHDPNKRP 276
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 83/206 (40%), Gaps = 25/206 (12%)
Query: 352 EVLGKGSVGTSYKAVL----EEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLR 407
E LGKG+ + V +E ++ K A ++ E + + +KH N+V L
Sbjct: 28 EELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 87
Query: 408 AFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGK 467
+ L++D + G L + D + ++ L A + H H G
Sbjct: 88 DSISEEGHHYLIFDLVTGGELFEDIVAREYYSEA--DASHCIQQILEA---VLHCHQMG- 141
Query: 468 IVHGNIKASNILLRPDHDAC---VSDFGL--------NPLFGNTTPPTRVAGYRAPEVVE 516
+VH ++K N+LL ++DFGL FG P GY +PEV+
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTP----GYLSPEVLR 197
Query: 517 TRKVTFKSDVYSFGVLLLELLTGKAP 542
D+++ GV+L LL G P
Sbjct: 198 KDPYGKPVDLWACGVILYILLVGYPP 223
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 82/206 (39%), Gaps = 25/206 (12%)
Query: 352 EVLGKGSVGTSYKAVL----EEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLR 407
E +GKG+ + V E ++ K A ++ E + + +KH N+V L
Sbjct: 10 EDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLH 69
Query: 408 AFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGK 467
+ LV+D + G L + D + ++ L A + H H G
Sbjct: 70 DSISEEGFHYLVFDLVTGGELFEDIVAREYYSEA--DASHCIQQILEA---VLHCHQMG- 123
Query: 468 IVHGNIKASNILLRPDHDAC---VSDFGL--------NPLFGNTTPPTRVAGYRAPEVVE 516
+VH ++K N+LL ++DFGL FG P GY +PEV+
Sbjct: 124 VVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTP----GYLSPEVLR 179
Query: 517 TRKVTFKSDVYSFGVLLLELLTGKAP 542
D+++ GV+L LL G P
Sbjct: 180 KEAYGKPVDIWACGVILYILLVGYPP 205
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 459 LAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTRVAG---YRAPEVV 515
LAHLH G +VH ++K +NI L P + DFGL G G Y APE++
Sbjct: 170 LAHLHSQG-LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELL 228
Query: 516 ETRKVTFKSDVYSFGVLLLEL 536
+ T +DV+S G+ +LE+
Sbjct: 229 QGSYGT-AADVFSLGLTILEV 248
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 50/122 (40%), Gaps = 29/122 (23%)
Query: 444 DWDNR------------MRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDF 491
DW NR + I + A + LH G ++H ++K SNI D V DF
Sbjct: 150 DWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKG-LMHRDLKPSNIFFTMDDVVKVGDF 208
Query: 492 GL--------------NPLFGNTTPPTRVAG--YRAPEVVETRKVTFKSDVYSFGVLLLE 535
GL P+ T +V Y +PE + + K D++S G++L E
Sbjct: 209 GLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFE 268
Query: 536 LL 537
LL
Sbjct: 269 LL 270
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 96/210 (45%), Gaps = 35/210 (16%)
Query: 354 LGKGSVGTSYKAVLEE-GTTVVVKRLKEVAVGKREFEM----QMEVLGKIKHDNVVPL-- 406
+G+G+ G +KA + G V +K++ + K F + ++++L +KH+NVV L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVL-MENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 407 ----RAFYYS--KDEKLLVYDYMP---AGSLSALLHGSRGSGRTPLDWDNRMRIALSAAR 457
+A Y+ K LV+D+ AG LS +L R+
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL--------VKFTLSEIKRVMQMLLN 136
Query: 458 GLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLF--GNTTPPTRVAG------Y 509
GL ++H KI+H ++KA+N+L+ D ++DFGL F + P R Y
Sbjct: 137 GLYYIH-RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 510 RAPE-VVETRKVTFKSDVYSFGVLLLELLT 538
R PE ++ R D++ G ++ E+ T
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 457 RGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT---TPPTRVAGYRAPE 513
RGL LH + IVH ++K NIL+ ++DFGL ++ TP YRAPE
Sbjct: 131 RGLDFLH-ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPE 189
Query: 514 VVETRKVTFKSDVYSFGVLLLELLTGK 540
V+ D++S G + E+ K
Sbjct: 190 VLLQSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 97/223 (43%), Gaps = 35/223 (15%)
Query: 347 LRASAE------VLGKGSVGTSYKAVLEEGTTVV--VKRLKEVAVGKRE----FEMQMEV 394
LR AE V+G+G+ G + V + T V +K L + + KR F + ++
Sbjct: 69 LRMKAEDYEVVKVIGRGAFG-EVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 127
Query: 395 LGKIKHDNVVPLRAFYYSKDEKLL--VYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIA 452
+ VV L FY +D++ L V +YMP G L L+ + P W R A
Sbjct: 128 MAFANSPWVVQL--FYAFQDDRYLYMVMEYMPGGDLVNLM----SNYDVPEKW-ARFYTA 180
Query: 453 LSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFG----LNPLFGNTTPPTRVA- 507
L +H G +H ++K N+LL ++DFG +N G T V
Sbjct: 181 -EVVLALDAIHSMG-FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKE-GMVRCDTAVGT 237
Query: 508 -GYRAPEVVETR----KVTFKSDVYSFGVLLLELLTGKAPNQA 545
Y +PEV++++ + D +S GV L E+L G P A
Sbjct: 238 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 280
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 11/83 (13%)
Query: 470 HGNIKASNILLRPDHDACVSDFGLNPL--------FGNTTPPTRVAGYRAPEVVETRKVT 521
H ++K NIL+ D A + DFG+ GNT Y APE T
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTV---GTLYYXAPERFSESHAT 213
Query: 522 FKSDVYSFGVLLLELLTGKAPNQ 544
+++D+Y+ +L E LTG P Q
Sbjct: 214 YRADIYALTCVLYECLTGSPPYQ 236
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 91/213 (42%), Gaps = 28/213 (13%)
Query: 352 EVLGKGSVGTSYKAVLEEGTTV-VVKRLKEVAVGKRE----FEMQMEVLGKIKHDNVVPL 406
+V+G+G+ G L+ V +K L + + KR F + +VL + L
Sbjct: 80 KVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTL 139
Query: 407 RAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLD----WDNRMRIALSAARGLAHL 462
+ + LV DY G L LL S+ R P + + M IA+ + L +
Sbjct: 140 HYAFQDDNNLYLVMDYYVGGDLLTLL--SKFEDRLPEEMARFYLAEMVIAIDSVHQLHY- 196
Query: 463 HVSGKIVHGNIKASNILLRPDHDACVSDFG-LNPLFGNTTPPTRVA----GYRAPEVVET 517
VH +IK NIL+ + ++DFG L + T + VA Y +PE+++
Sbjct: 197 ------VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQA 250
Query: 518 R-----KVTFKSDVYSFGVLLLELLTGKAPNQA 545
+ + D +S GV + E+L G+ P A
Sbjct: 251 MEGGKGRYGPECDWWSLGVCMYEMLYGETPFYA 283
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 97/223 (43%), Gaps = 35/223 (15%)
Query: 347 LRASAE------VLGKGSVGTSYKAVLEEGTTVV--VKRLKEVAVGKRE----FEMQMEV 394
LR AE V+G+G+ G + V + T V +K L + + KR F + ++
Sbjct: 69 LRMKAEDYEVVKVIGRGAFG-EVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 127
Query: 395 LGKIKHDNVVPLRAFYYSKDEKLL--VYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIA 452
+ VV L FY +D++ L V +YMP G L L+ + P W R A
Sbjct: 128 MAFANSPWVVQL--FYAFQDDRYLYMVMEYMPGGDLVNLM----SNYDVPEKW-ARFYTA 180
Query: 453 LSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFG----LNPLFGNTTPPTRVA- 507
L +H G +H ++K N+LL ++DFG +N G T V
Sbjct: 181 -EVVLALDAIHSMG-FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKE-GMVRCDTAVGT 237
Query: 508 -GYRAPEVVETR----KVTFKSDVYSFGVLLLELLTGKAPNQA 545
Y +PEV++++ + D +S GV L E+L G P A
Sbjct: 238 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 280
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 97/223 (43%), Gaps = 35/223 (15%)
Query: 347 LRASAE------VLGKGSVGTSYKAVLEEGTTVV--VKRLKEVAVGKRE----FEMQMEV 394
LR AE V+G+G+ G + V + T V +K L + + KR F + ++
Sbjct: 64 LRMKAEDYEVVKVIGRGAFG-EVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 122
Query: 395 LGKIKHDNVVPLRAFYYSKDEKLL--VYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIA 452
+ VV L FY +D++ L V +YMP G L L+ + P W R A
Sbjct: 123 MAFANSPWVVQL--FYAFQDDRYLYMVMEYMPGGDLVNLM----SNYDVPEKW-ARFYTA 175
Query: 453 LSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFG----LNPLFGNTTPPTRVA- 507
L +H G +H ++K N+LL ++DFG +N G T V
Sbjct: 176 -EVVLALDAIHSMG-FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKE-GMVRCDTAVGT 232
Query: 508 -GYRAPEVVETR----KVTFKSDVYSFGVLLLELLTGKAPNQA 545
Y +PEV++++ + D +S GV L E+L G P A
Sbjct: 233 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 275
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 96/210 (45%), Gaps = 35/210 (16%)
Query: 354 LGKGSVGTSYKAVLEE-GTTVVVKRLKEVAVGKREFEM----QMEVLGKIKHDNVVPL-- 406
+G+G+ G +KA + G V +K++ + K F + ++++L +KH+NVV L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVL-MENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 407 ----RAFYYS--KDEKLLVYDYMP---AGSLSALLHGSRGSGRTPLDWDNRMRIALSAAR 457
+A Y+ K LV+D+ AG LS +L R+
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL--------VKFTLSEIKRVMQMLLN 136
Query: 458 GLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLF--GNTTPPTRVAG------Y 509
GL ++H KI+H ++KA+N+L+ D ++DFGL F + P R Y
Sbjct: 137 GLYYIH-RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 510 RAPE-VVETRKVTFKSDVYSFGVLLLELLT 538
R PE ++ R D++ G ++ E+ T
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 96/210 (45%), Gaps = 35/210 (16%)
Query: 354 LGKGSVGTSYKAVLEE-GTTVVVKRLKEVAVGKREFEM----QMEVLGKIKHDNVVPL-- 406
+G+G+ G +KA + G V +K++ + K F + ++++L +KH+NVV L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVL-MENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 407 ----RAFYYS--KDEKLLVYDYMP---AGSLSALLHGSRGSGRTPLDWDNRMRIALSAAR 457
+A Y+ K LV+D+ AG LS +L R+
Sbjct: 85 ICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVL--------VKFTLSEIKRVMQMLLN 136
Query: 458 GLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLF--GNTTPPTRVAG------Y 509
GL ++H KI+H ++KA+N+L+ D ++DFGL F + P R Y
Sbjct: 137 GLYYIH-RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 510 RAPE-VVETRKVTFKSDVYSFGVLLLELLT 538
R PE ++ R D++ G ++ E+ T
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 96/210 (45%), Gaps = 35/210 (16%)
Query: 354 LGKGSVGTSYKAVLEE-GTTVVVKRLKEVAVGKREFEM----QMEVLGKIKHDNVVPL-- 406
+G+G+ G +KA + G V +K++ + K F + ++++L +KH+NVV L
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVL-MENEKEGFPITALREIKILQLLKHENVVNLIE 83
Query: 407 ----RAFYYS--KDEKLLVYDYMP---AGSLSALLHGSRGSGRTPLDWDNRMRIALSAAR 457
+A Y+ K LV+D+ AG LS +L R+
Sbjct: 84 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL--------VKFTLSEIKRVMQMLLN 135
Query: 458 GLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLF--GNTTPPTRVAG------Y 509
GL ++H KI+H ++KA+N+L+ D ++DFGL F + P R Y
Sbjct: 136 GLYYIH-RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 194
Query: 510 RAPE-VVETRKVTFKSDVYSFGVLLLELLT 538
R PE ++ R D++ G ++ E+ T
Sbjct: 195 RPPELLLGERDYGPPIDLWGAGCIMAEMWT 224
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 101/246 (41%), Gaps = 52/246 (21%)
Query: 353 VLGKGSVGTSYKAV--LEEGTTVVVK--RLKEVAVGKREFEMQMEVLGKIKHDNVVPLRA 408
++G GS G +A LE+ + K R+ E + + ++ +L ++ HD+VV +
Sbjct: 60 LIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLD 119
Query: 409 FYYSKD----EKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIA---LSAARGLAH 461
KD ++L V + L RTP+ + + I + G+ +
Sbjct: 120 IVIPKDVEKFDELYVVLEIADSDFKKLF-------RTPV-YLTELHIKTLLYNLLVGVKY 171
Query: 462 LHVSGKIVHGNIKASNILLRPDHDACVSDFGLN-----PLFGNTTPPT------------ 504
+H +G I+H ++K +N L+ D V DFGL P GN+ P
Sbjct: 172 VHSAG-ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTF 230
Query: 505 --------RVAG------YRAPEVVETRK-VTFKSDVYSFGVLLLELLTGKAPNQASLGE 549
++ G YRAPE++ ++ T DV+S G + ELL N A +
Sbjct: 231 PHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHAD 290
Query: 550 EGIDLP 555
G P
Sbjct: 291 RGPLFP 296
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Query: 457 RGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT---TPPTRVAGYRAPE 513
RGL LH + IVH ++K NIL+ ++DFGL ++ P YRAPE
Sbjct: 123 RGLDFLHANC-IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVVTLWYRAPE 181
Query: 514 VVETRKVTFKSDVYSFGVLLLELLTGK 540
V+ D++S G + E+ K
Sbjct: 182 VLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 91/199 (45%), Gaps = 17/199 (8%)
Query: 352 EVLGKGSVGTSYKAVLEE-GTTVVVKRLKEVAVGKREFEMQMEVLGKIKHD------NVV 404
+V+GKG G KA + V +K ++ R+ ++ +L ++ NV+
Sbjct: 103 KVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVI 162
Query: 405 PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRT-PLDWDNRMRIALSAARGLAHLH 463
+ + ++ + ++ + + +L L+ ++ G + PL + A S + L LH
Sbjct: 163 HMLENFTFRNHICMTFELL-SMNLYELIKKNKFQGFSLPL----VRKFAHSILQCLDALH 217
Query: 464 VSGKIVHGNIKASNILLRPDHDACVS--DFGLNPL-FGNTTPPTRVAGYRAPEVVETRKV 520
+I+H ++K NILL+ + + DFG + + YRAPEV+ +
Sbjct: 218 -KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYXXIQSRFYRAPEVILGARY 276
Query: 521 TFKSDVYSFGVLLLELLTG 539
D++S G +L ELLTG
Sbjct: 277 GMPIDMWSLGCILAELLTG 295
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 46/104 (44%), Gaps = 7/104 (6%)
Query: 451 IALSAARGLAHLHVSGKIVHGNIKASNILL---RPDHDACVSDFGL---NPLFGNTTPPT 504
I S + +LH S I H ++K N+L RP+ ++DFG + T P
Sbjct: 166 IXKSIGEAIQYLH-SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC 224
Query: 505 RVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLG 548
Y APEV+ K D +S GV+ LL G P ++ G
Sbjct: 225 YTPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHG 268
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Query: 457 RGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTT---PPTRVAGYRAPE 513
RGL LH + IVH ++K NIL+ ++DFGL ++ P YRAPE
Sbjct: 123 RGLDFLHANC-IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVVTLWYRAPE 181
Query: 514 VVETRKVTFKSDVYSFGVLLLELLTGK 540
V+ D++S G + E+ K
Sbjct: 182 VLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Query: 457 RGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTT---PPTRVAGYRAPE 513
RGL LH + IVH ++K NIL+ ++DFGL ++ P YRAPE
Sbjct: 123 RGLDFLHANC-IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVVTLWYRAPE 181
Query: 514 VVETRKVTFKSDVYSFGVLLLELLTGK 540
V+ D++S G + E+ K
Sbjct: 182 VLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 120/299 (40%), Gaps = 59/299 (19%)
Query: 339 YSFDLEDLLRASAEVLGKGSVGTSYKAV-LEEGTTVVVKRLKEVAVGKREFEMQMEVLGK 397
Y+ D E++ VLG+G+ G KA + +K+++ ++ +L
Sbjct: 4 YASDFEEI-----AVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLAS 58
Query: 398 IKHDNVVPLRAFYY-------------SKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLD 444
+ H VV A + K + +Y +L L+H + +
Sbjct: 59 LNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEY 118
Query: 445 WDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL----------- 493
W R+ L+++H G I+H ++K NI + + + DFGL
Sbjct: 119 W----RLFRQILEALSYIHSQG-IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDIL 173
Query: 494 ----NPLFG---NTTPPTRVAGYRAPEVVE-TRKVTFKSDVYSFGVLLLELLTGKAPNQA 545
L G N T A Y A EV++ T K D+YS G++ E++
Sbjct: 174 KLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYP-----F 228
Query: 546 SLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRP 604
S G E +++ + ++SV E FD M+ +E+++++LL + P++RP
Sbjct: 229 STGMERVNILKKLRSVSIE--FPPDFDDNKMK---VEKKIIRLL------IDHDPNKRP 276
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 37/220 (16%)
Query: 351 AEVLGKGSVGTSYKAVLEEGTTVV----VKRLKEVAVGKREFEMQMEVLGKIKHDNVVPL 406
++G+GS G Y A + V V R+ E + + ++ +L ++K D ++ L
Sbjct: 31 KHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRL 90
Query: 407 RAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTP--LDWDNRMRIALSAARGLAHLHV 464
D LL +D + L + +TP L ++ I + G +H
Sbjct: 91 YDLIIPDD--LLKFDEL-YIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHE 147
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGL-------------NPLFGNTTP--------- 502
SG I+H ++K +N LL D V DFGL N L N P
Sbjct: 148 SG-IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKK 206
Query: 503 ----PTRVAGYRAPEVVETRKVTFKS-DVYSFGVLLLELL 537
YRAPE++ ++ KS D++S G + ELL
Sbjct: 207 QLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELL 246
>pdb|2R9U|A Chain A, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|B Chain B, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|C Chain C, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|D Chain D, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
Length = 174
Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 35/66 (53%)
Query: 110 PSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLDLSSNNFSGKIPFDVNNLTHLTG 169
P F +L L+ LY SN+ + + ++ +LT+LDL+ N+ +NL LT
Sbjct: 50 PGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTH 109
Query: 170 LFLENN 175
++L NN
Sbjct: 110 IYLYNN 115
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 94/216 (43%), Gaps = 32/216 (14%)
Query: 352 EVLGKGSVGTSYKAVLEEGTT---VVVKRLKEVAVGKRE----FEMQMEVLGKIKHDNVV 404
+V+G+G+ G AV++ T +K L + + KR F + +VL +
Sbjct: 80 KVIGRGAFGEV--AVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWIT 137
Query: 405 PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLD----WDNRMRIALSAARGLA 460
L + ++ LV DY G L LL S+ + P D + M +A+ + L
Sbjct: 138 ALHYAFQDENHLYLVMDYYVGGDLLTLL--SKFEDKLPEDMARFYIGEMVLAIDSIHQLH 195
Query: 461 HLHVSGKIVHGNIKASNILLRPDHDACVSDFG-LNPLFGNTTPPTRVA----GYRAPEVV 515
+ VH +IK N+LL + ++DFG + + T + VA Y +PE++
Sbjct: 196 Y-------VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEIL 248
Query: 516 ETR-----KVTFKSDVYSFGVLLLELLTGKAPNQAS 546
+ K + D +S GV + E+L G+ P A
Sbjct: 249 QAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAE 284
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 94/215 (43%), Gaps = 32/215 (14%)
Query: 352 EVLGKGSVGTSYKAVLEEGTT---VVVKRLKEVAVGKRE----FEMQMEVLGKIKHDNVV 404
+V+G+G+ G AV++ T +K L + + KR F + +VL +
Sbjct: 96 KVIGRGAFGEV--AVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWIT 153
Query: 405 PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLD----WDNRMRIALSAARGLA 460
L + ++ LV DY G L LL S+ + P D + M +A+ + L
Sbjct: 154 ALHYAFQDENHLYLVMDYYVGGDLLTLL--SKFEDKLPEDMARFYIGEMVLAIDSIHQLH 211
Query: 461 HLHVSGKIVHGNIKASNILLRPDHDACVSDFG-LNPLFGNTTPPTRVA----GYRAPEVV 515
+ VH +IK N+LL + ++DFG + + T + VA Y +PE++
Sbjct: 212 Y-------VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEIL 264
Query: 516 ETR-----KVTFKSDVYSFGVLLLELLTGKAPNQA 545
+ K + D +S GV + E+L G+ P A
Sbjct: 265 QAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYA 299
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 33/204 (16%)
Query: 354 LGKGSVGTSYKAV-LEEGTTVVVKRLK----EVAVGKREFEMQMEVLGKIKHDNVVPLRA 408
LG+G+ G YKA+ TV +KR++ E V ++ +L +++H N++ L++
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIR-EVSLLKELQHRNIIELKS 100
Query: 409 FYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALS----AARGLAHLHV 464
+ L+++Y L + + P D MR+ S G+ H
Sbjct: 101 VIHHNHRLHLIFEYA-ENDLKKYM------DKNP---DVSMRVIKSFLYQLINGVNFCH- 149
Query: 465 SGKIVHGNIKASNILLRPDHDAC------VSDFGLNPLFG----NTTPPTRVAGYRAPEV 514
S + +H ++K N+LL DA + DFGL FG T YR PE+
Sbjct: 150 SRRCLHRDLKPQNLLLSVS-DASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEI 208
Query: 515 -VETRKVTFKSDVYSFGVLLLELL 537
+ +R + D++S + E+L
Sbjct: 209 LLGSRHYSTSVDIWSIACIWAEML 232
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 98/256 (38%), Gaps = 48/256 (18%)
Query: 339 YSFDLEDLLRASAEVLGKGSVGTSYKAV-LEEGTTVVVKRLKEVAVGKREFEMQMEVLGK 397
Y+ D E++ VLG+G+ G KA + +K+++ ++ +L
Sbjct: 4 YASDFEEI-----AVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLAS 58
Query: 398 IKHDNVVPLRAFYY-------------SKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLD 444
+ H VV A + K + +Y +L L+H + +
Sbjct: 59 LNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEY 118
Query: 445 WDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL----------- 493
W R+ L+++H G I+H N+K NI + + + DFGL
Sbjct: 119 W----RLFRQILEALSYIHSQG-IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDIL 173
Query: 494 ----NPLFG---NTTPPTRVAGYRAPEVVE-TRKVTFKSDVYSFGVLLLELLTGKAPNQA 545
L G N T A Y A EV++ T K D YS G++ E +
Sbjct: 174 KLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIYP-----F 228
Query: 546 SLGEEGIDLPRWVQSV 561
S G E +++ + ++SV
Sbjct: 229 STGXERVNILKKLRSV 244
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 85/211 (40%), Gaps = 26/211 (12%)
Query: 351 AEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVA-------VGKREFEMQMEVLGKIKHDNV 403
EV+GKG + + E ++ +VA + + + + + +KH ++
Sbjct: 29 CEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHI 88
Query: 404 VPLRAFYYSKDEKLLVYDYMPAGSLS--ALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
V L Y S +V+++M L + G + + MR L A R +
Sbjct: 89 VELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALR---Y 145
Query: 462 LHVSGKIVHGNIKASNILLRPDHDAC---VSDFGLNPLFGNTTPPTRVAGYR-------A 511
H I+H ++K +LL ++ + FG+ G + VAG R A
Sbjct: 146 CH-DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESG---LVAGGRVGTPHFMA 201
Query: 512 PEVVETRKVTFKSDVYSFGVLLLELLTGKAP 542
PEVV+ DV+ GV+L LL+G P
Sbjct: 202 PEVVKREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 85/211 (40%), Gaps = 26/211 (12%)
Query: 351 AEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVA-------VGKREFEMQMEVLGKIKHDNV 403
EV+GKG + + E ++ +VA + + + + + +KH ++
Sbjct: 31 CEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHI 90
Query: 404 VPLRAFYYSKDEKLLVYDYMPAGSLS--ALLHGSRGSGRTPLDWDNRMRIALSAARGLAH 461
V L Y S +V+++M L + G + + MR L A R +
Sbjct: 91 VELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALR---Y 147
Query: 462 LHVSGKIVHGNIKASNILLRPDHDAC---VSDFGLNPLFGNTTPPTRVAGYR-------A 511
H I+H ++K +LL ++ + FG+ G + VAG R A
Sbjct: 148 CH-DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESG---LVAGGRVGTPHFMA 203
Query: 512 PEVVETRKVTFKSDVYSFGVLLLELLTGKAP 542
PEVV+ DV+ GV+L LL+G P
Sbjct: 204 PEVVKREPYGKPVDVWGCGVILFILLSGCLP 234
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 16/199 (8%)
Query: 352 EVLGKGSVG-TSYKAVLEEGTTVVVKRL-KEVAVGKREFEMQM---EVLGKIKHDNVVPL 406
+ LG GS G +E G +K L K+ V +E E + +L + +V L
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKL 106
Query: 407 RAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGR--TPLDWDNRMRIALSAARGLAHLHV 464
+ +V +Y P G + + L R GR P +I L+ +LH
Sbjct: 107 EFSFKDNSNLYMVMEYAPGGEMFSHL---RRIGRFSEPHARFYAAQIVLT----FEYLH- 158
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGL-NPLFGNTTPPTRVAGYRAPEVVETRKVTFK 523
S +++ ++K N+++ V+DFGL + G T Y APE++ ++
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 524 SDVYSFGVLLLELLTGKAP 542
D ++ GVL+ E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 78/180 (43%), Gaps = 18/180 (10%)
Query: 366 VLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPA 425
+L++ V +K+++ KR +L + +V L + +V +YMP
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKR-------ILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPG 125
Query: 426 GSLSALLHGSRGSGR--TPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPD 483
G + + L R GR P +I L+ +LH S +++ ++K N+L+
Sbjct: 126 GDMFSHL---RRIGRFSEPHARFYAAQIVLT----FEYLH-SLDLIYRDLKPENLLIDQQ 177
Query: 484 HDACVSDFGL-NPLFGNTTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAP 542
V+DFG + G T Y APE++ ++ D ++ GVL+ E+ G P
Sbjct: 178 GYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 78/180 (43%), Gaps = 18/180 (10%)
Query: 366 VLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPA 425
+L++ V +K+++ KR +L + +V L + +V +YMP
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKR-------ILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPG 125
Query: 426 GSLSALLHGSRGSGR--TPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPD 483
G + + L R GR P +I L+ +LH S +++ ++K N+L+
Sbjct: 126 GDMFSHL---RRIGRFSEPHARFYAAQIVLT----FEYLH-SLDLIYRDLKPENLLIDQQ 177
Query: 484 HDACVSDFGL-NPLFGNTTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAP 542
V+DFG + G T Y APE++ ++ D ++ GVL+ E+ G P
Sbjct: 178 GYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 16/199 (8%)
Query: 352 EVLGKGSVG-TSYKAVLEEGTTVVVKRL-KEVAVGKREFEMQM---EVLGKIKHDNVVPL 406
+ LG GS G +E G +K L K+ V +E E + +L + +V L
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKL 106
Query: 407 RAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGR--TPLDWDNRMRIALSAARGLAHLHV 464
+ +V +Y P G + + L R GR P +I L+ +LH
Sbjct: 107 EFSFKDNSNLYMVMEYAPGGEMFSHL---RRIGRFSEPHARFYAAQIVLT----FEYLH- 158
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGL-NPLFGNTTPPTRVAGYRAPEVVETRKVTFK 523
S +++ ++K N+++ V+DFGL + G T Y APE++ ++
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 524 SDVYSFGVLLLELLTGKAP 542
D ++ GVL+ E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 87/210 (41%), Gaps = 23/210 (10%)
Query: 351 AEVLGKGSVGTSYKAVLEEGTTVV--VKRLKEVAVGKRE----FEMQMEVLGKIKHDNVV 404
+V+G+G+ G + V + + V +K L + + KR F + +++ VV
Sbjct: 80 VKVIGRGAFG-EVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVV 138
Query: 405 PLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV 464
L + +V +YMP G L L+ + + + +AL A +H
Sbjct: 139 QLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDA------IHS 192
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT-----TPPTRVAGYRAPEVVETR- 518
G ++H ++K N+LL ++DFG T Y +PEV++++
Sbjct: 193 MG-LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQG 251
Query: 519 ---KVTFKSDVYSFGVLLLELLTGKAPNQA 545
+ D +S GV L E+L G P A
Sbjct: 252 GDGYYGRECDWWSVGVFLFEMLVGDTPFYA 281
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 96/227 (42%), Gaps = 38/227 (16%)
Query: 345 DLLRASAEV---LGKGSVGTSYKAVLEE--GTTVVVKRLKEVAVGKREFEMQMEVLGKIK 399
D+L A E+ LG+G+ G + + + G V VK +K V +++VL +
Sbjct: 10 DVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLN 69
Query: 400 HDN------VVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIAL 453
+ V + ++ +V++ + + + + +G P D+ ++A
Sbjct: 70 TTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFI----KENGFLPFRLDHIRKMAY 125
Query: 454 SAARGLAHLHVSGKIVHGNIKASNIL-LRPDH------------------DACVSDFGLN 494
+ + LH S K+ H ++K NIL ++ D+ D V DFG +
Sbjct: 126 QICKSVNFLH-SNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFG-S 183
Query: 495 PLFGNTTPPTRVA--GYRAPEVVETRKVTFKSDVYSFGVLLLELLTG 539
+ + T V+ YRAPEV+ + DV+S G +L+E G
Sbjct: 184 ATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLG 230
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 16/199 (8%)
Query: 352 EVLGKGSVG-TSYKAVLEEGTTVVVKRL-KEVAVGKREFEMQM---EVLGKIKHDNVVPL 406
+ LG GS G +E G +K L K+ V ++ E + +L + +V L
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 407 RAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGR--TPLDWDNRMRIALSAARGLAHLHV 464
+ +V +Y+P G + + L R GR P +I L+ +LH
Sbjct: 108 EFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLT----FEYLH- 159
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGL-NPLFGNTTPPTRVAGYRAPEVVETRKVTFK 523
S +++ ++K N+L+ V+DFG + G T Y APE++ ++
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKA 219
Query: 524 SDVYSFGVLLLELLTGKAP 542
D ++ GVL+ E+ G P
Sbjct: 220 VDWWALGVLIYEMAAGYPP 238
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 16/199 (8%)
Query: 352 EVLGKGSVG-TSYKAVLEEGTTVVVKRL-KEVAVGKREFEMQM---EVLGKIKHDNVVPL 406
+ LG GS G +E G +K L K+ V ++ E + +L + +V L
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 407 RAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGR--TPLDWDNRMRIALSAARGLAHLHV 464
+ +V +Y+P G + + L R GR P +I L+ +LH
Sbjct: 108 EFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLT----FEYLH- 159
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGL-NPLFGNTTPPTRVAGYRAPEVVETRKVTFK 523
S +++ ++K N+L+ V+DFG + G T Y APE++ ++
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 524 SDVYSFGVLLLELLTGKAP 542
D ++ GVL+ E+ G P
Sbjct: 220 VDWWALGVLIYEMAAGYPP 238
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 16/199 (8%)
Query: 352 EVLGKGSVG-TSYKAVLEEGTTVVVKRL-KEVAVGKREFEMQM---EVLGKIKHDNVVPL 406
+ LG GS G +E G +K L K+ V ++ E + +L + +V L
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 407 RAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGR--TPLDWDNRMRIALSAARGLAHLHV 464
+ +V +Y+P G + + L R GR P +I L+ +LH
Sbjct: 107 EFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLT----FEYLH- 158
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGL-NPLFGNTTPPTRVAGYRAPEVVETRKVTFK 523
S +++ ++K N+L+ V+DFG + G T Y APE++ ++
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 524 SDVYSFGVLLLELLTGKAP 542
D ++ GVL+ E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 16/199 (8%)
Query: 352 EVLGKGSVG-TSYKAVLEEGTTVVVKRL-KEVAVGKREFEMQM---EVLGKIKHDNVVPL 406
+ LG GS G +E G +K L K+ V ++ E + +L + +V L
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 407 RAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGR--TPLDWDNRMRIALSAARGLAHLHV 464
+ +V +Y+P G + + L R GR P +I L+ +LH
Sbjct: 108 EFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFXEPHARFYAAQIVLT----FEYLH- 159
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGL-NPLFGNTTPPTRVAGYRAPEVVETRKVTFK 523
S +++ ++K N+L+ V+DFG + G T Y APE++ ++
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 524 SDVYSFGVLLLELLTGKAP 542
D ++ GVL+ E+ G P
Sbjct: 220 VDWWALGVLIYEMAAGYPP 238
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 16/199 (8%)
Query: 352 EVLGKGSVG-TSYKAVLEEGTTVVVKRL-KEVAVGKREFEMQM---EVLGKIKHDNVVPL 406
+ LG GS G +E G +K L K+ V ++ E + +L + +V L
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 407 RAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGR--TPLDWDNRMRIALSAARGLAHLHV 464
+ +V +Y+P G + + L R GR P +I L+ +LH
Sbjct: 107 EFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFXEPHARFYAAQIVLT----FEYLH- 158
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGL-NPLFGNTTPPTRVAGYRAPEVVETRKVTFK 523
S +++ ++K N+L+ V+DFG + G T Y APE++ ++
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 524 SDVYSFGVLLLELLTGKAP 542
D ++ GVL+ E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 16/199 (8%)
Query: 352 EVLGKGSVG-TSYKAVLEEGTTVVVKRL-KEVAVGKREFEMQM---EVLGKIKHDNVVPL 406
+ LG GS G +E G +K L K+ V ++ E + +L + +V L
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 407 RAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGR--TPLDWDNRMRIALSAARGLAHLHV 464
+ +V +Y+P G + + L R GR P +I L+ +LH
Sbjct: 107 EFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLT----FEYLH- 158
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGL-NPLFGNTTPPTRVAGYRAPEVVETRKVTFK 523
S +++ ++K N+L+ V+DFG + G T Y APE++ ++
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 524 SDVYSFGVLLLELLTGKAP 542
D ++ GVL+ E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 95/227 (41%), Gaps = 38/227 (16%)
Query: 345 DLLRASAEV---LGKGSVGTSYKAVLEE--GTTVVVKRLKEVAVGKREFEMQMEVLGKIK 399
D+L A E+ LG+G+ G + + + G V VK +K V +++VL +
Sbjct: 10 DVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLN 69
Query: 400 HDN------VVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIAL 453
+ V + ++ +V++ + + + + +G P D+ ++A
Sbjct: 70 TTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFI----KENGFLPFRLDHIRKMAY 125
Query: 454 SAARGLAHLHVSGKIVHGNIKASNIL-LRPDH------------------DACVSDFGLN 494
+ + LH S K+ H ++K NIL ++ D+ D V DFG +
Sbjct: 126 QICKSVNFLH-SNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFG-S 183
Query: 495 PLFGNTTPPTRVA--GYRAPEVVETRKVTFKSDVYSFGVLLLELLTG 539
+ + T V YRAPEV+ + DV+S G +L+E G
Sbjct: 184 ATYDDEHHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLG 230
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 16/199 (8%)
Query: 352 EVLGKGSVG-TSYKAVLEEGTTVVVKRL-KEVAVGKREFEMQM---EVLGKIKHDNVVPL 406
+ LG GS G +E G +K L K+ V ++ E + +L + +V L
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 407 RAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGR--TPLDWDNRMRIALSAARGLAHLHV 464
+ +V +Y+P G + + L R GR P +I L+ +LH
Sbjct: 107 EFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLT----FEYLH- 158
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGL-NPLFGNTTPPTRVAGYRAPEVVETRKVTFK 523
S +++ ++K N+L+ V+DFG + G T Y APE++ ++
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 524 SDVYSFGVLLLELLTGKAP 542
D ++ GVL+ E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 83/198 (41%), Gaps = 14/198 (7%)
Query: 352 EVLGKGSVG-TSYKAVLEEGTTVVVKRL-KEVAVGKREFEMQM---EVLGKIKHDNVVPL 406
+ LG GS G +E G +K L K+ V ++ E + +L + +V L
Sbjct: 33 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 92
Query: 407 RAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRI-ALSAARGLAHLHVS 465
+ +V +Y+P G + + L R GR + R A +LH S
Sbjct: 93 EFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFS---EPHARFYAAQIVLTFEYLH-S 145
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGL-NPLFGNTTPPTRVAGYRAPEVVETRKVTFKS 524
+++ ++K N+L+ V+DFG + G T Y APE++ ++
Sbjct: 146 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAV 205
Query: 525 DVYSFGVLLLELLTGKAP 542
D ++ GVL+ E+ G P
Sbjct: 206 DWWALGVLIYEMAAGYPP 223
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 16/199 (8%)
Query: 352 EVLGKGSVG-TSYKAVLEEGTTVVVKRL-KEVAVGKREFEMQM---EVLGKIKHDNVVPL 406
+ LG GS G +E G +K L K+ V ++ E + +L + +V L
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 407 RAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGR--TPLDWDNRMRIALSAARGLAHLHV 464
+ +V +Y+P G + + L R GR P +I L+ +LH
Sbjct: 107 EFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFXEPHARFYAAQIVLT----FEYLH- 158
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGL-NPLFGNTTPPTRVAGYRAPEVVETRKVTFK 523
S +++ ++K N+L+ V+DFG + G T Y APE++ ++
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 524 SDVYSFGVLLLELLTGKAP 542
D ++ GVL+ E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 89/216 (41%), Gaps = 23/216 (10%)
Query: 352 EVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYY 411
+VLG G+ GT + + V VKR+ + E+Q+ + +H NV+ R F
Sbjct: 30 DVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQL-LRESDEHPNVI--RYFCT 86
Query: 412 SKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHG 471
KD + + Y+ +A L + + GLAHLH S IVH
Sbjct: 87 EKDRQ---FQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH-SLNIVHR 142
Query: 472 NIKASNILLRPDH-----DACVSDFGL-------NPLFGNTTPPTRVAGYRAPEVVE--- 516
++K NIL+ + A +SDFGL F + G+ APE++
Sbjct: 143 DLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDC 202
Query: 517 TRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEG 551
T+ D++S G + +++ G P SL +
Sbjct: 203 KENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQA 238
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 78/180 (43%), Gaps = 18/180 (10%)
Query: 366 VLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPA 425
+L++ V +K+++ KR +L + +V L + +V +Y+P
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKR-------ILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPG 125
Query: 426 GSLSALLHGSRGSGR--TPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPD 483
G + + L R GR P +I L+ +LH S +++ ++K N+L+
Sbjct: 126 GEMFSHL---RRIGRFSEPHARFYAAQIVLT----FEYLH-SLDLIYRDLKPENLLIDQQ 177
Query: 484 HDACVSDFGL-NPLFGNTTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAP 542
V+DFG + G T Y APE++ ++ D ++ GVL+ E+ G P
Sbjct: 178 GYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 78/180 (43%), Gaps = 18/180 (10%)
Query: 366 VLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPA 425
+L++ V +K+++ KR +L + +V L + +V +Y+P
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKR-------ILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPG 125
Query: 426 GSLSALLHGSRGSGR--TPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPD 483
G + + L R GR P +I L+ +LH S +++ ++K N+L+
Sbjct: 126 GEMFSHL---RRIGRFSEPHARFYAAQIVLT----FEYLH-SLDLIYRDLKPENLLIDQQ 177
Query: 484 HDACVSDFGL-NPLFGNTTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAP 542
V+DFG + G T Y APE++ ++ D ++ GVL+ E+ G P
Sbjct: 178 GYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 93/233 (39%), Gaps = 26/233 (11%)
Query: 332 VFFEG-GVYSFDLEDLLRASAEVLGKGSVGTSYKAVLEE-GTTVVVKRLKEVAVGKREFE 389
V F+G + + D + S +VLG G G + G +K L + ++E +
Sbjct: 14 VLFQGPEPKKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVD 73
Query: 390 MQMEVLGKIKHDNVVPLRAFY----YSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDW 445
+ G ++V + Y + K L++ + M G L + + T +
Sbjct: 74 HHWQASGG---PHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREA 130
Query: 446 DNRMRIALSAARGLAHLHVSGKIVHGNIKASNILL-RPDHDACV--SDFGLNPLFGNTTP 502
MR + LH S I H ++K N+L + DA + +DFG F T
Sbjct: 131 AEIMR---DIGTAIQFLH-SHNIAHRDVKPENLLYTSKEKDAVLKLTDFG----FAKETT 182
Query: 503 ------PTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGE 549
P Y APEV+ K D++S GV++ LL G P ++ G+
Sbjct: 183 QNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQ 235
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 78/180 (43%), Gaps = 18/180 (10%)
Query: 366 VLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPA 425
+L++ V +K+++ KR +L + +V L + +V +Y+P
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKR-------ILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPG 125
Query: 426 GSLSALLHGSRGSGR--TPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPD 483
G + + L R GR P +I L+ +LH S +++ ++K N+L+
Sbjct: 126 GEMFSHL---RRIGRFSEPHARFYAAQIVLT----FEYLH-SLDLIYRDLKPENLLIDQQ 177
Query: 484 HDACVSDFGL-NPLFGNTTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAP 542
V+DFG + G T Y APE++ ++ D ++ GVL+ E+ G P
Sbjct: 178 GYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 78/180 (43%), Gaps = 18/180 (10%)
Query: 366 VLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPA 425
+L++ V +K+++ KR +L + +V L + +V +Y+P
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKR-------ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG 126
Query: 426 GSLSALLHGSRGSGR--TPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPD 483
G + + L R GR P +I L+ +LH S +++ ++K N+L+
Sbjct: 127 GEMFSHL---RRIGRFSEPHARFYAAQIVLT----FEYLH-SLDLIYRDLKPENLLIDQQ 178
Query: 484 HDACVSDFGL-NPLFGNTTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAP 542
V+DFG + G T Y APE++ ++ D ++ GVL+ E+ G P
Sbjct: 179 GYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 89/224 (39%), Gaps = 25/224 (11%)
Query: 340 SFDLEDLLRASAEVLGKGSVGTSYKAVLEE-GTTVVVKRLKEVAVGKREFEMQMEVLGKI 398
+ + D + S +VLG G G + G +K L + ++E + + G
Sbjct: 4 KYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGG- 62
Query: 399 KHDNVVPLRAFY----YSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALS 454
++V + Y + K L++ + M G L + + T + MR
Sbjct: 63 --PHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMR---D 117
Query: 455 AARGLAHLHVSGKIVHGNIKASNILL-RPDHDACV--SDFGLNPLFGNTTP------PTR 505
+ LH S I H ++K N+L + DA + +DFG F T P
Sbjct: 118 IGTAIQFLH-SHNIAHRDVKPENLLYTSKEKDAVLKLTDFG----FAKETTQNALQTPCY 172
Query: 506 VAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGE 549
Y APEV+ K D++S GV++ LL G P ++ G+
Sbjct: 173 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQ 216
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 78/180 (43%), Gaps = 18/180 (10%)
Query: 366 VLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPA 425
+L++ V +K+++ KR +L + +V L + +V +Y+P
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKR-------ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG 126
Query: 426 GSLSALLHGSRGSGR--TPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPD 483
G + + L R GR P +I L+ +LH S +++ ++K N+L+
Sbjct: 127 GEMFSHL---RRIGRFSEPHARFYAAQIVLT----FEYLH-SLDLIYRDLKPENLLIDQQ 178
Query: 484 HDACVSDFGL-NPLFGNTTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAP 542
V+DFG + G T Y APE++ ++ D ++ GVL+ E+ G P
Sbjct: 179 GYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 78/180 (43%), Gaps = 18/180 (10%)
Query: 366 VLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPA 425
+L++ V +K+++ KR +L + +V L + +V +Y+P
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKR-------ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG 126
Query: 426 GSLSALLHGSRGSGR--TPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPD 483
G + + L R GR P +I L+ +LH S +++ ++K N+L+
Sbjct: 127 GEMFSHL---RRIGRFSEPHARFYAAQIVLT----FEYLH-SLDLIYRDLKPENLLIDQQ 178
Query: 484 HDACVSDFGL-NPLFGNTTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAP 542
V+DFG + G T Y APE++ ++ D ++ GVL+ E+ G P
Sbjct: 179 GYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr)
Rbc36 In Complex With H-Trisaccharide
Length = 229
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 110 PSDFSNLTLLRSLYLQSNQFSGVFPASV-TRMNRLTRLDLSSNNFSGKIPFDVNNLTHLT 168
P F +L L+ LYL SNQ G P V + +LT LDL +N + + L HL
Sbjct: 57 PGVFDSLINLKELYLGSNQL-GALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLK 115
Query: 169 GLFLENNKFS 178
LF+ NK +
Sbjct: 116 ELFMCCNKLT 125
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 78/180 (43%), Gaps = 18/180 (10%)
Query: 366 VLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPA 425
+L++ V +K+++ KR +L + +V L + +V +Y+P
Sbjct: 94 ILDKQKVVKLKQIEHTLNEKR-------ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG 146
Query: 426 GSLSALLHGSRGSGR--TPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPD 483
G + + L R GR P +I L+ +LH S +++ ++K N+L+
Sbjct: 147 GEMFSHL---RRIGRFSEPHARFYAAQIVLT----FEYLH-SLDLIYRDLKPENLLIDQQ 198
Query: 484 HDACVSDFGL-NPLFGNTTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAP 542
V+DFG + G T Y APE++ ++ D ++ GVL+ E+ G P
Sbjct: 199 GYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 78/180 (43%), Gaps = 18/180 (10%)
Query: 366 VLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPA 425
+L++ V +K+++ KR +L + +V L + +V +Y+P
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKR-------ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG 125
Query: 426 GSLSALLHGSRGSGR--TPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPD 483
G + + L R GR P +I L+ +LH S +++ ++K N+L+
Sbjct: 126 GEMFSHL---RRIGRFSEPHARFYAAQIVLT----FEYLH-SLDLIYRDLKPENLLIDQQ 177
Query: 484 HDACVSDFGL-NPLFGNTTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAP 542
V+DFG + G T Y APE++ ++ D ++ GVL+ E+ G P
Sbjct: 178 GYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 78/180 (43%), Gaps = 18/180 (10%)
Query: 366 VLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPA 425
+L++ V +K+++ KR +L + +V L + +V +Y+P
Sbjct: 66 ILDKQKVVKLKQIEHTLNEKR-------ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG 118
Query: 426 GSLSALLHGSRGSGR--TPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPD 483
G + + L R GR P +I L+ +LH S +++ ++K N+L+
Sbjct: 119 GEMFSHL---RRIGRFXEPHARFYAAQIVLT----FEYLH-SLDLIYRDLKPENLLIDQQ 170
Query: 484 HDACVSDFGL-NPLFGNTTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAP 542
V+DFG + G T Y APE++ ++ D ++ GVL+ E+ G P
Sbjct: 171 GYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 78/180 (43%), Gaps = 18/180 (10%)
Query: 366 VLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPA 425
+L++ V +K+++ KR +L + +V L + +V +Y+P
Sbjct: 66 ILDKQKVVKLKQIEHTLNEKR-------ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG 118
Query: 426 GSLSALLHGSRGSGR--TPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPD 483
G + + L R GR P +I L+ +LH S +++ ++K N+L+
Sbjct: 119 GEMFSHL---RRIGRFSEPHARFYAAQIVLT----FEYLH-SLDLIYRDLKPENLLIDQQ 170
Query: 484 HDACVSDFGL-NPLFGNTTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAP 542
V+DFG + G T Y APE++ ++ D ++ GVL+ E+ G P
Sbjct: 171 GYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|3G3A|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|C Chain C, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|E Chain E, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|G Chain G, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
Length = 178
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 117 TLLRSLYLQSNQFSGVFPASVTRMNRLTRLDLSSNNFSGKIPFDV-NNLTHLTGLFLENN 175
T + LYL NQ + + P R+ +LTRLDL +N + +P V + LT LT L L +N
Sbjct: 38 TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLT-VLPAGVFDKLTQLTQLSLNDN 96
Query: 176 KF 177
+
Sbjct: 97 QL 98
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 110 PSDFSNLTLLRSLYLQSNQFSGVFPASV-TRMNRLTRLDLSSNNFSGKIPFDVNNLTHLT 168
P F LT L L L +NQ + V PA V ++ +LT+L L+ N +NL LT
Sbjct: 55 PGVFDRLTQLTRLDLDNNQLT-VLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLT 113
Query: 169 GLFLENNKF 177
++L NN +
Sbjct: 114 HIWLLNNPW 122
>pdb|3G39|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor
Length = 170
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 117 TLLRSLYLQSNQFSGVFPASVTRMNRLTRLDLSSNNFSGKIPFDV-NNLTHLTGLFLENN 175
T + LYL NQ + + P R+ +LTRLDL +N + +P V + LT LT L L +N
Sbjct: 30 TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLT-VLPAGVFDKLTQLTQLSLNDN 88
Query: 176 KF 177
+
Sbjct: 89 QL 90
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 110 PSDFSNLTLLRSLYLQSNQFSGVFPASV-TRMNRLTRLDLSSNNFSGKIPFDVNNLTHLT 168
P F LT L L L +NQ + V PA V ++ +LT+L L+ N +NL LT
Sbjct: 47 PGVFDRLTQLTRLDLDNNQLT-VLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLT 105
Query: 169 GLFLENNKF 177
++L NN +
Sbjct: 106 HIWLLNNPW 114
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 111/276 (40%), Gaps = 49/276 (17%)
Query: 353 VLGKGSVGTSYKA-VLEEGTTVVVK-----------RLKEVAVGKREFEMQMEVLGKIKH 400
+LGKG GT + L + V +K L + E + +V H
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97
Query: 401 DNVVPLRAFYYSKDEKLLVYDY-MPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGL 459
V+ L ++ +++ +LV + +PA L + G P +R A +
Sbjct: 98 PGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGP----SRCFFGQVVA-AI 152
Query: 460 AHLHVSGKIVHGNIKASNILLRPDHD-ACVSDFGLNPLFGNTTPPTRVAG---YRAPEVV 515
H H G +VH +IK NIL+ A + DFG L + P T G Y PE +
Sbjct: 153 QHCHSRG-VVHRDIKDENILIDLRRGCAKLIDFGSGALL-HDEPYTDFDGTRVYSPPEWI 210
Query: 516 ETRKV-TFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVE 574
+ + V+S G+LL +++ G P + R++ E+ + E
Sbjct: 211 SRHQYHALPATVWSLGILLYDMVCGDIPFE------------------RDQ---EILEAE 249
Query: 575 LMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVV 610
L ++ + L++ C++ P RP+++E++
Sbjct: 250 LHFPAHVSPDCCALIR---RCLAPKPSSRPSLEEIL 282
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 84/199 (42%), Gaps = 16/199 (8%)
Query: 352 EVLGKGSVG-TSYKAVLEEGTTVVVKRL-KEVAVGKREFEMQM---EVLGKIKHDNVVPL 406
+ LG GS G +E G +K L K+ V ++ E + +L + +V L
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 407 RAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGR--TPLDWDNRMRIALSAARGLAHLHV 464
+ +V +Y P G + + L R GR P +I L+ +LH
Sbjct: 107 EFSFKDNSNLYMVMEYAPGGEMFSHL---RRIGRFSEPHARFYAAQIVLT----FEYLH- 158
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGL-NPLFGNTTPPTRVAGYRAPEVVETRKVTFK 523
S +++ ++K N+++ V+DFG + G T Y APE++ ++
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 524 SDVYSFGVLLLELLTGKAP 542
D ++ GVL+ E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 86/222 (38%), Gaps = 40/222 (18%)
Query: 352 EVLGKGSVGTSYKAVLEEGTTVV----VKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLR 407
++G+GS G Y A + V V R+ E + + ++ +L ++K D ++ L
Sbjct: 34 HLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLH 93
Query: 408 AFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTP--LDWDNRMRIALSAARGLAHLHVS 465
+D LL +D + L + +TP L + I + G +H S
Sbjct: 94 DLIIPED--LLKFDELYI-VLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKFIHES 150
Query: 466 GKIVHGNIKASNILLRPDHDACVSDFGL-----------------------------NPL 496
G I+H ++K +N LL D + DFGL L
Sbjct: 151 G-IIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNKNL 209
Query: 497 FGNTTPPTRVAGYRAPEVVETRK-VTFKSDVYSFGVLLLELL 537
T YRAPE++ ++ T D++S G + ELL
Sbjct: 210 KKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELL 251
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 84/199 (42%), Gaps = 16/199 (8%)
Query: 352 EVLGKGSVG-TSYKAVLEEGTTVVVKRL-KEVAVGKREFEMQM---EVLGKIKHDNVVPL 406
+ LG GS G +E G +K L K+ V ++ E + +L + +V L
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 407 RAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGR--TPLDWDNRMRIALSAARGLAHLHV 464
+ +V +Y P G + + L R GR P +I L+ +LH
Sbjct: 107 EFSFKDNSNLYMVMEYAPGGEMFSHL---RRIGRFXEPHARFYAAQIVLT----FEYLH- 158
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGL-NPLFGNTTPPTRVAGYRAPEVVETRKVTFK 523
S +++ ++K N+++ V+DFG + G T Y APE++ ++
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 524 SDVYSFGVLLLELLTGKAP 542
D ++ GVL+ E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 84/199 (42%), Gaps = 16/199 (8%)
Query: 352 EVLGKGSVG-TSYKAVLEEGTTVVVKRL-KEVAVGKREFEMQM---EVLGKIKHDNVVPL 406
+ LG GS G +E G +K L K+ V ++ E + +L + +V L
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 407 RAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGR--TPLDWDNRMRIALSAARGLAHLHV 464
+ +V +Y P G + + L R GR P +I L+ +LH
Sbjct: 107 EFSFKDNSNLYMVMEYAPGGEMFSHL---RRIGRFSEPHARFYAAQIVLT----FEYLH- 158
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGL-NPLFGNTTPPTRVAGYRAPEVVETRKVTFK 523
S +++ ++K N+++ V+DFG + G T Y APE++ ++
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 524 SDVYSFGVLLLELLTGKAP 542
D ++ GVL+ E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 58/140 (41%), Gaps = 29/140 (20%)
Query: 107 GEIPSDFSNLT-LLRSLYLQSNQFSGVFPASVTRMNRLTRLDLSSNNFSG---------- 155
G IP + + + L S+ + N+ +G P + +N L +DLS N G
Sbjct: 163 GAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDK 221
Query: 156 ---KIPFDVNNLT----------HLTGLFLENNKFSGNLPS--INPANLRDFNVSNNNLN 200
KI N+L +L GL L NN+ G LP L NVS NNL
Sbjct: 222 NTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLC 281
Query: 201 GSIP--ATLSKFPQSSFTGN 218
G IP L +F S++ N
Sbjct: 282 GEIPQGGNLQRFDVSAYANN 301
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/190 (19%), Positives = 78/190 (41%), Gaps = 13/190 (6%)
Query: 364 KAVLEEGTTVVVKRLKEVAVGKR--EFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYD 421
K++LE+ ++++ + +F+ +++++ IK++ + + DE ++Y+
Sbjct: 64 KSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYE 123
Query: 422 YMPAGSL-----SALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKAS 476
YM S+ + + P+ I S +++H I H ++K S
Sbjct: 124 YMENDSILKFDEYFFVLDKNYTCFIPIQV--IKCIIKSVLNSFSYIHNEKNICHRDVKPS 181
Query: 477 NILLRPDHDACVSDFGLNPLFGNTTPPTRVAGYRA--PEVV--ETRKVTFKSDVYSFGVL 532
NIL+ + +SDFG + + Y PE E+ K D++S G+
Sbjct: 182 NILMDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGIC 241
Query: 533 LLELLTGKAP 542
L + P
Sbjct: 242 LYVMFYNVVP 251
>pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 7/85 (8%)
Query: 113 FSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLDLSSNNFSGKIPFDVNNLTHLTGLFL 172
F L L++L L NQ S V P S +N LT L+L+SN PF+ N +L
Sbjct: 98 FLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASN------PFNCNCHLAWFAEWL 151
Query: 173 ENNKFSGNLPSIN-PANLRDFNVSN 196
+G P+ +RD + +
Sbjct: 152 RKKSLNGGAARCGAPSKVRDVQIKD 176
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 87/206 (42%), Gaps = 31/206 (15%)
Query: 391 QMEVLGKIKHDNVVPLRAFYYSKDEKL--------------LVYDYMPAGSLSALLHGSR 436
+++++ ++ HDN+V + +L +V +YM + L G
Sbjct: 58 EIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQG-- 115
Query: 437 GSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLR-PDHDACVSDFGL-- 493
PL ++ RGL ++H S ++H ++K +N+ + D + DFGL
Sbjct: 116 -----PLLEEHARLFMYQLLRGLKYIH-SANVLHRDLKPANLFINTEDLVLKIGDFGLAR 169
Query: 494 --NPLF---GNTTPPTRVAGYRAPEVVET-RKVTFKSDVYSFGVLLLELLTGKAPNQASL 547
+P + G+ + YR+P ++ + T D+++ G + E+LTGK +
Sbjct: 170 IMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAH 229
Query: 548 GEEGIDLPRWVQSVVREEWTAEVFDV 573
E + L VV EE E+ V
Sbjct: 230 ELEQMQLILESIPVVHEEDRQELLSV 255
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 77/180 (42%), Gaps = 18/180 (10%)
Query: 366 VLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPA 425
+L++ V +K+++ KR +L + +V L + +V +Y P
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKR-------ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPG 126
Query: 426 GSLSALLHGSRGSGR--TPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPD 483
G + + L R GR P +I L+ +LH S +++ ++K N+++
Sbjct: 127 GEMFSHL---RRIGRFSEPHARFYAAQIVLT----FEYLH-SLDLIYRDLKPENLMIDQQ 178
Query: 484 HDACVSDFGL-NPLFGNTTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAP 542
V+DFG + G T Y APE++ ++ D ++ GVL+ E+ G P
Sbjct: 179 GYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 58/128 (45%), Gaps = 11/128 (8%)
Query: 418 LVYDYMPAGSLSALLHGSRGSGR--TPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKA 475
+V +Y P G + + L R GR P +I L+ +LH S +++ ++K
Sbjct: 119 MVLEYAPGGEMFSHL---RRIGRFSEPHARFYAAQIVLT----FEYLH-SLDLIYRDLKP 170
Query: 476 SNILLRPDHDACVSDFGL-NPLFGNTTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLL 534
N+L+ V+DFG + G T Y APE++ ++ D ++ GVL+
Sbjct: 171 ENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 230
Query: 535 ELLTGKAP 542
E+ G P
Sbjct: 231 EMAAGYPP 238
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 458 GLAHLHVSGKIVHGNIKASNILLR----PDH--DACVSDFGLNPLFG-NTTPPTRVAGYR 510
GL ++H I+H +IK N+L+ P++ ++D G + + T + YR
Sbjct: 143 GLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYR 202
Query: 511 APEVVETRKVTFKSDVYSFGVLLLELLTG 539
+PEV+ +D++S L+ EL+TG
Sbjct: 203 SPEVLLGAPWGCGADIWSTACLIFELITG 231
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 458 GLAHLHVSGKIVHGNIKASNILLR----PDH--DACVSDFGLNPLFG-NTTPPTRVAGYR 510
GL ++H I+H +IK N+L+ P++ ++D G + + T + YR
Sbjct: 143 GLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYR 202
Query: 511 APEVVETRKVTFKSDVYSFGVLLLELLTG 539
+PEV+ +D++S L+ EL+TG
Sbjct: 203 SPEVLLGAPWGCGADIWSTACLIFELITG 231
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 11/128 (8%)
Query: 418 LVYDYMPAGSLSALLHGSRGSGR--TPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKA 475
+V +Y P G + + L R GR P +I L+ +LH S +++ ++K
Sbjct: 119 MVMEYAPGGEMFSHL---RRIGRFSEPHARFYAAQIVLT----FEYLH-SLDLIYRDLKP 170
Query: 476 SNILLRPDHDACVSDFGL-NPLFGNTTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLL 534
N+++ V+DFG + G T Y APE++ ++ D ++ GVL+
Sbjct: 171 ENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 230
Query: 535 ELLTGKAP 542
E+ G P
Sbjct: 231 EMAAGYPP 238
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 11/128 (8%)
Query: 418 LVYDYMPAGSLSALLHGSRGSGR--TPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKA 475
+V +Y P G + + L R GR P +I L+ +LH S +++ ++K
Sbjct: 119 MVMEYAPGGEMFSHL---RRIGRFXEPHARFYAAQIVLT----FEYLH-SLDLIYRDLKP 170
Query: 476 SNILLRPDHDACVSDFGL-NPLFGNTTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLL 534
N+++ V+DFG + G T Y APE++ ++ D ++ GVL+
Sbjct: 171 ENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 230
Query: 535 ELLTGKAP 542
E+ G P
Sbjct: 231 EMAAGYPP 238
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 11/128 (8%)
Query: 418 LVYDYMPAGSLSALLHGSRGSGR--TPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKA 475
+V +Y P G + + L R GR P +I L+ +LH S +++ ++K
Sbjct: 119 MVMEYAPGGEMFSHL---RRIGRFSEPHARFYAAQIVLT----FEYLH-SLDLIYRDLKP 170
Query: 476 SNILLRPDHDACVSDFGL-NPLFGNTTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLL 534
N+++ V+DFG + G T Y APE++ ++ D ++ GVL+
Sbjct: 171 ENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 230
Query: 535 ELLTGKAP 542
E+ G P
Sbjct: 231 EMAAGYPP 238
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 459 LAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL-NPLFGNTTPPTRVAGYRAPEVVET 517
+LH S +++ ++K N+L+ V+DFG + G T Y APE++ +
Sbjct: 154 FEYLH-SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLAGTPEYLAPEIILS 212
Query: 518 RKVTFKSDVYSFGVLLLELLTGKAP 542
+ D ++ GVL+ E+ G P
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 67/177 (37%), Gaps = 43/177 (24%)
Query: 400 HDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGL 459
DNV+ ++ + D ++ Y+ S +L+ L + L+ + L
Sbjct: 79 QDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNS--------LSFQEVREYMLNLFKAL 130
Query: 460 AHLHVSGKIVHGNIKASNILL-RPDHDACVSDFGLNPLFGNT------------------ 500
+H G IVH ++K SN L R + DFGL +T
Sbjct: 131 KRIHQFG-IVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCS 189
Query: 501 --------------TPPTRVAGYRAPEVV-ETRKVTFKSDVYSFGVLLLELLTGKAP 542
P G+RAPEV+ + T D++S GV+ L LL+G+ P
Sbjct: 190 QNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYP 246
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 459 LAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL-NPLFGNTTPPTRVAGYRAPEVVET 517
+LH S +++ ++K N+L+ V+DFG + G T Y APE++ +
Sbjct: 154 FEYLH-SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 518 RKVTFKSDVYSFGVLLLELLTGKAP 542
+ D ++ GVL+ E+ G P
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 459 LAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL-NPLFGNTTPPTRVAGYRAPEVVET 517
+LH S +++ ++K N+L+ V+DFG + G T Y APE++ +
Sbjct: 154 FEYLH-SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 518 RKVTFKSDVYSFGVLLLELLTGKAP 542
+ D ++ GVL+ E+ G P
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 459 LAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL-NPLFGNTTPPTRVAGYRAPEVVET 517
+LH S +++ ++K N+L+ V+DFG + G T Y APE++ +
Sbjct: 149 FEYLH-SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 207
Query: 518 RKVTFKSDVYSFGVLLLELLTGKAP 542
+ D ++ GVL+ E+ G P
Sbjct: 208 KGYNKAVDWWALGVLIYEMAAGYPP 232
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 459 LAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL-NPLFGNTTPPTRVAGYRAPEVVET 517
+LH S +++ ++K N+L+ V+DFG + G T Y APE++ +
Sbjct: 154 FEYLH-SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 518 RKVTFKSDVYSFGVLLLELLTGKAP 542
+ D ++ GVL+ E+ G P
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 459 LAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL-NPLFGNTTPPTRVAGYRAPEVVET 517
+LH S +++ ++K N+L+ V+DFG + G T Y APE++ +
Sbjct: 154 FEYLH-SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 518 RKVTFKSDVYSFGVLLLELLTGKAP 542
+ D ++ GVL+ E+ G P
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 84/199 (42%), Gaps = 16/199 (8%)
Query: 352 EVLGKGSVG-TSYKAVLEEGTTVVVKRL-KEVAVGKREFEMQM---EVLGKIKHDNVVPL 406
+ LG GS G +E G +K L K+ V ++ E + +L + +V L
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 407 RAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGR--TPLDWDNRMRIALSAARGLAHLHV 464
+ +V +Y+ G + + L R GR P +I L+ +LH
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLT----FEYLH- 158
Query: 465 SGKIVHGNIKASNILLRPDHDACVSDFGL-NPLFGNTTPPTRVAGYRAPEVVETRKVTFK 523
S +++ ++K N+L+ V+DFG + G T Y APE++ ++
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 524 SDVYSFGVLLLELLTGKAP 542
D ++ GVL+ E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|3G3B|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|C Chain C, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|E Chain E, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|G Chain G, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
Length = 170
Score = 36.2 bits (82), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 117 TLLRSLYLQSNQFSGVFPASVTRMNRLTRLDLSSNNFSGKIPFDV-NNLTHLTGLFLENN 175
T + LYL N+ + + P R+ +LTRLDL +N + +P V + LT LT L L +N
Sbjct: 30 TTTQVLYLYDNRITKLEPGVFDRLTQLTRLDLDNNQLT-VLPAGVFDKLTQLTQLSLNDN 88
Query: 176 KF 177
+
Sbjct: 89 QL 90
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 110 PSDFSNLTLLRSLYLQSNQFSGVFPASV-TRMNRLTRLDLSSNNFSGKIPFDVNNLTHLT 168
P F LT L L L +NQ + V PA V ++ +LT+L L+ N +NL LT
Sbjct: 47 PGVFDRLTQLTRLDLDNNQLT-VLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLRSLT 105
Query: 169 GLFLENNKF 177
++L NN +
Sbjct: 106 HIWLLNNPW 114
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 36.2 bits (82), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 459 LAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL-NPLFGNTTPPTRVAGYRAPEVVET 517
+LH S +++ ++K N+L+ V+DFG + G T Y APE++ +
Sbjct: 154 FEYLH-SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLXGTPEYLAPEIILS 212
Query: 518 RKVTFKSDVYSFGVLLLELLTGKAP 542
+ D ++ GVL+ E+ G P
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 459 LAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL-NPLFGNTTPPTRVAGYRAPEVVET 517
+LH S +++ ++K N+L+ V+DFG + G T Y APE++ +
Sbjct: 155 FEYLH-SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 213
Query: 518 RKVTFKSDVYSFGVLLLELLTGKAP 542
+ D ++ GVL+ E+ G P
Sbjct: 214 KGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 459 LAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL-NPLFGNTTPPTRVAGYRAPEVVET 517
+LH S +++ ++K N+L+ V+DFG + G T Y APE++ +
Sbjct: 154 FEYLH-SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 518 RKVTFKSDVYSFGVLLLELLTGKAP 542
+ D ++ GVL+ E+ G P
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 459 LAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL-NPLFGNTTPPTRVAGYRAPEVVET 517
+LH S +++ ++K N+L+ V+DFG + G T Y APE++ +
Sbjct: 154 FEYLH-SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 518 RKVTFKSDVYSFGVLLLELLTGKAP 542
+ D ++ GVL+ E+ G P
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 459 LAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL-NPLFGNTTPPTRVAGYRAPEVVET 517
+LH S +++ ++K N+L+ V+DFG + G T Y APE++ +
Sbjct: 154 FEYLH-SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 518 RKVTFKSDVYSFGVLLLELLTGKAP 542
+ D ++ GVL+ E+ G P
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 36.2 bits (82), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 459 LAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL-NPLFGNTTPPTRVAGYRAPEVVET 517
+LH S +++ ++K N+L+ V+DFG + G T Y APE++ +
Sbjct: 154 FEYLH-SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 518 RKVTFKSDVYSFGVLLLELLTGKAP 542
+ D ++ GVL+ E+ G P
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 36.2 bits (82), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 459 LAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL-NPLFGNTTPPTRVAGYRAPEVVET 517
+LH S +++ ++K N+L+ V+DFG + G T Y APE++ +
Sbjct: 154 FEYLH-SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 518 RKVTFKSDVYSFGVLLLELLTGKAP 542
+ D ++ GVL+ E+ G P
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 35.8 bits (81), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 459 LAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL-NPLFGNTTPPTRVAGYRAPEVVET 517
+LH S +++ ++K N+L+ V+DFG + G T Y APE++ +
Sbjct: 175 FEYLH-SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 233
Query: 518 RKVTFKSDVYSFGVLLLELLTGKAP 542
+ D ++ GVL+ E+ G P
Sbjct: 234 KGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 35.8 bits (81), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 459 LAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL-NPLFGNTTPPTRVAGYRAPEVVET 517
+LH S +++ ++K N+L+ V+DFG + G T Y APE++ +
Sbjct: 141 FEYLH-SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 199
Query: 518 RKVTFKSDVYSFGVLLLELLTGKAP 542
+ D ++ GVL+ E+ G P
Sbjct: 200 KGYNKAVDWWALGVLIYEMAAGYPP 224
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 35.8 bits (81), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 459 LAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL-NPLFGNTTPPTRVAGYRAPEVVET 517
+LH S +++ ++K N+L+ V+DFG + G T Y APE++ +
Sbjct: 175 FEYLH-SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLCGTPEYLAPEIILS 233
Query: 518 RKVTFKSDVYSFGVLLLELLTGKAP 542
+ D ++ GVL+ E+ G P
Sbjct: 234 KGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 91/231 (39%), Gaps = 38/231 (16%)
Query: 341 FDLEDLLRASAEV---LGKGSVGTSYKAVLEE--GTTVVVKRLKEVAVGKREFEMQMEVL 395
+ + D L+ E+ LG+G+ G + V G V +K +K V K +++ VL
Sbjct: 25 YHVGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAARLEINVL 84
Query: 396 GKIKH---DN---VVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRM 449
KI DN V + ++ + ++ + + L + + P
Sbjct: 85 EKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFL----KDNNYLPYPIHQVR 140
Query: 450 RIALSAARGLAHLHVSGKIVHGNIKASNIL-LRPDHDAC------------------VSD 490
+A + + LH K+ H ++K NIL + D++ V D
Sbjct: 141 HMAFQLCQAVKFLH-DNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVD 199
Query: 491 FGLNPLFGNTTPPTRVA--GYRAPEVVETRKVTFKSDVYSFGVLLLELLTG 539
FG + F + T V+ YRAPEV+ + DV+S G ++ E G
Sbjct: 200 FG-SATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVG 249
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.134 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,800,908
Number of Sequences: 62578
Number of extensions: 658412
Number of successful extensions: 3820
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 554
Number of HSP's successfully gapped in prelim test: 525
Number of HSP's that attempted gapping in prelim test: 1924
Number of HSP's gapped (non-prelim): 1216
length of query: 654
length of database: 14,973,337
effective HSP length: 105
effective length of query: 549
effective length of database: 8,402,647
effective search space: 4613053203
effective search space used: 4613053203
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)