Query 036334
Match_columns 654
No_of_seqs 660 out of 5373
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 20:03:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036334.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036334hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aoj_A High affinity nerve gro 100.0 6.9E-53 2.4E-57 437.0 23.0 251 351-619 46-320 (329)
2 4asz_A BDNF/NT-3 growth factor 100.0 1.8E-53 6.1E-58 435.4 17.2 253 350-620 17-291 (299)
3 4gt4_A Tyrosine-protein kinase 100.0 7.2E-53 2.4E-57 432.8 20.4 249 351-617 31-305 (308)
4 3omv_A RAF proto-oncogene seri 100.0 6E-52 2E-56 424.2 22.3 250 350-619 40-301 (307)
5 3hmm_A TGF-beta receptor type- 100.0 1.9E-52 6.5E-57 430.5 17.3 258 351-620 8-299 (303)
6 4b9d_A Serine/threonine-protei 100.0 1.1E-52 3.8E-57 435.6 13.4 242 349-611 27-276 (350)
7 4g3f_A NF-kappa-beta-inducing 100.0 4.8E-51 1.6E-55 421.5 20.4 246 350-620 62-318 (336)
8 4fih_A Serine/threonine-protei 100.0 2.3E-51 8E-56 425.0 16.7 240 351-612 79-324 (346)
9 4ase_A Vascular endothelial gr 100.0 1.3E-50 4.6E-55 423.2 16.8 255 349-620 67-349 (353)
10 3fpq_A Serine/threonine-protei 100.0 2.3E-50 7.9E-55 409.4 17.7 239 352-611 32-282 (290)
11 4fie_A Serine/threonine-protei 100.0 3.5E-50 1.2E-54 426.4 16.6 241 350-612 155-401 (423)
12 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.9E-50 6.3E-55 412.1 13.9 239 349-611 35-284 (311)
13 3hyh_A Carbon catabolite-derep 100.0 1.6E-49 5.3E-54 399.8 17.5 237 350-611 17-262 (275)
14 3ubd_A Ribosomal protein S6 ki 100.0 9.9E-50 3.4E-54 406.8 11.1 234 349-606 27-271 (304)
15 4g31_A Eukaryotic translation 100.0 7.4E-48 2.5E-52 394.4 17.8 241 349-611 8-279 (299)
16 4b99_A Mitogen-activated prote 100.0 4.2E-45 1.4E-49 388.2 21.7 251 349-612 57-345 (398)
17 4f9c_A Cell division cycle 7-r 100.0 1.7E-44 5.8E-49 379.5 22.1 188 349-546 24-250 (361)
18 2qkw_B Protein kinase; three-h 100.0 9.2E-44 3.2E-48 370.1 24.1 266 351-619 44-316 (321)
19 3v5w_A G-protein coupled recep 100.0 5.3E-44 1.8E-48 395.5 19.0 241 350-611 193-449 (689)
20 3soc_A Activin receptor type-2 100.0 1.3E-43 4.3E-48 369.3 19.4 262 350-619 28-319 (322)
21 3uto_A Twitchin; kinase, muscl 100.0 6.9E-44 2.4E-48 397.2 17.0 244 349-611 160-410 (573)
22 3uim_A Brassinosteroid insensi 100.0 3.6E-43 1.2E-47 366.4 19.5 266 351-619 35-312 (326)
23 3s95_A LIMK-1, LIM domain kina 100.0 3.5E-42 1.2E-46 356.3 21.5 249 351-619 15-283 (310)
24 4hcu_A Tyrosine-protein kinase 100.0 1.6E-42 5.6E-47 351.2 18.5 249 349-619 13-267 (269)
25 3p86_A Serine/threonine-protei 100.0 2E-42 6.9E-47 357.9 18.5 253 349-620 40-300 (309)
26 2psq_A Fibroblast growth facto 100.0 2.1E-42 7.2E-47 366.9 19.1 253 350-620 85-366 (370)
27 3fxz_A Serine/threonine-protei 100.0 3.3E-42 1.1E-46 354.3 18.9 241 350-612 24-270 (297)
28 3sxs_A Cytoplasmic tyrosine-pr 100.0 4.1E-42 1.4E-46 348.0 16.8 248 350-619 12-265 (268)
29 3kul_A Ephrin type-A receptor 100.0 7.8E-42 2.7E-46 356.2 19.3 249 350-620 53-315 (325)
30 3q4u_A Activin receptor type-1 100.0 7.5E-42 2.6E-46 352.0 18.9 251 350-616 12-300 (301)
31 2izr_A Casein kinase I isoform 100.0 2.1E-41 7.2E-46 353.7 21.8 252 351-620 14-283 (330)
32 3gen_A Tyrosine-protein kinase 100.0 1.6E-41 5.5E-46 346.5 19.6 249 350-620 28-282 (283)
33 1qcf_A Haematopoetic cell kina 100.0 1.3E-41 4.4E-46 370.9 20.0 249 350-620 192-446 (454)
34 2nru_A Interleukin-1 receptor- 100.0 1.8E-40 6.3E-45 342.8 27.5 258 352-618 37-306 (307)
35 1k9a_A Carboxyl-terminal SRC k 100.0 3.1E-41 1.1E-45 367.4 22.5 248 350-620 197-447 (450)
36 3tki_A Serine/threonine-protei 100.0 7.8E-42 2.7E-46 355.8 17.0 242 350-612 11-262 (323)
37 1opk_A P150, C-ABL, proto-onco 100.0 1.8E-41 6E-46 373.5 19.8 250 350-620 224-480 (495)
38 2c30_A Serine/threonine-protei 100.0 7.1E-41 2.4E-45 348.3 23.3 240 351-612 50-295 (321)
39 3fe3_A MAP/microtubule affinit 100.0 2.7E-41 9.2E-46 352.1 19.8 239 350-612 19-265 (328)
40 3cbl_A C-FES, proto-oncogene t 100.0 4.1E-42 1.4E-46 365.9 13.1 248 350-619 118-375 (377)
41 2eva_A TAK1 kinase - TAB1 chim 100.0 3.7E-41 1.3E-45 348.2 20.0 253 350-624 12-269 (307)
42 2qol_A Ephrin receptor; recept 100.0 1.5E-41 5.3E-46 360.6 17.3 249 350-620 49-311 (373)
43 3tt0_A Basic fibroblast growth 100.0 6.1E-41 2.1E-45 357.5 21.0 259 350-626 73-360 (382)
44 3mdy_A Bone morphogenetic prot 100.0 8.5E-41 2.9E-45 349.9 21.4 256 349-620 40-333 (337)
45 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 4.4E-41 1.5E-45 366.4 19.9 249 350-620 188-442 (452)
46 2yab_A Death-associated protei 100.0 7.2E-41 2.4E-45 353.2 20.7 242 350-611 16-272 (361)
47 3zgw_A Maternal embryonic leuc 100.0 2E-41 6.8E-46 355.3 16.2 239 350-612 14-261 (347)
48 3ugc_A Tyrosine-protein kinase 100.0 1.2E-41 4E-46 349.8 14.1 256 350-620 14-293 (295)
49 3t9t_A Tyrosine-protein kinase 100.0 6.2E-41 2.1E-45 338.9 19.0 248 350-619 12-265 (267)
50 3op5_A Serine/threonine-protei 100.0 4.5E-41 1.6E-45 356.2 18.2 273 350-636 39-346 (364)
51 1tki_A Titin; serine kinase, m 100.0 4E-41 1.4E-45 350.1 16.9 244 350-612 9-258 (321)
52 4eqm_A Protein kinase; transfe 100.0 8.4E-41 2.9E-45 343.3 18.8 253 350-621 15-278 (294)
53 3l9p_A Anaplastic lymphoma kin 100.0 2.9E-41 9.9E-46 357.9 15.8 252 350-619 75-346 (367)
54 4euu_A Serine/threonine-protei 100.0 3.5E-40 1.2E-44 342.8 23.5 263 350-617 13-308 (319)
55 1luf_A Muscle-specific tyrosin 100.0 5.7E-41 1.9E-45 352.2 17.0 253 350-620 51-337 (343)
56 3dtc_A Mitogen-activated prote 100.0 6.2E-41 2.1E-45 339.8 16.3 243 351-616 12-271 (271)
57 3niz_A Rhodanese family protei 100.0 1E-40 3.4E-45 345.6 18.1 252 351-611 26-300 (311)
58 1o6l_A RAC-beta serine/threoni 100.0 1.7E-40 5.9E-45 347.1 20.0 239 350-612 9-261 (337)
59 2y0a_A Death-associated protei 100.0 2.4E-40 8.2E-45 345.1 20.5 244 348-611 13-271 (326)
60 2h8h_A Proto-oncogene tyrosine 100.0 9.3E-41 3.2E-45 371.1 18.5 250 350-621 271-526 (535)
61 3lb7_A RAF proto-oncogene seri 100.0 1.3E-40 4.6E-45 344.0 18.4 251 350-620 40-302 (307)
62 3vhe_A Vascular endothelial gr 100.0 3.4E-41 1.2E-45 356.3 14.0 253 350-619 26-356 (359)
63 2zv2_A Calcium/calmodulin-depe 100.0 1.1E-40 3.8E-45 343.1 17.4 239 350-611 17-292 (298)
64 1csn_A Casein kinase-1; phosph 100.0 2.6E-40 8.8E-45 340.0 20.1 254 350-620 14-285 (298)
65 3qup_A Tyrosine-protein kinase 100.0 1.5E-40 5.1E-45 346.1 18.2 254 349-620 26-300 (323)
66 1qpc_A LCK kinase; alpha beta 100.0 1.5E-40 5E-45 338.6 17.7 249 350-620 17-271 (279)
67 3uc3_A Serine/threonine-protei 100.0 1.7E-40 5.7E-45 351.1 18.7 245 350-612 24-275 (361)
68 3soa_A Calcium/calmodulin-depe 100.0 1.9E-40 6.4E-45 359.3 19.2 245 348-612 13-268 (444)
69 2ivs_A Proto-oncogene tyrosine 100.0 1.3E-40 4.4E-45 344.9 17.2 253 349-619 26-312 (314)
70 3c0i_A Peripheral plasma membr 100.0 2.6E-40 8.9E-45 348.4 19.7 248 347-611 25-286 (351)
71 1t46_A HOMO sapiens V-KIT hard 100.0 8.9E-41 3E-45 346.0 15.8 256 349-621 26-310 (313)
72 3kfa_A Tyrosine-protein kinase 100.0 1.2E-40 4.2E-45 340.7 16.6 249 350-619 17-272 (288)
73 4fr4_A YANK1, serine/threonine 100.0 2.8E-40 9.7E-45 350.8 19.9 241 350-611 19-271 (384)
74 4fvq_A Tyrosine-protein kinase 100.0 2.7E-41 9.1E-46 345.8 11.6 248 350-620 12-277 (289)
75 1mqb_A Ephrin type-A receptor 100.0 5.2E-40 1.8E-44 343.6 21.4 250 351-622 49-313 (333)
76 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.8E-40 6.1E-45 346.7 17.9 238 350-612 13-259 (336)
77 3poz_A Epidermal growth factor 100.0 8.3E-41 2.9E-45 348.8 15.3 247 350-619 19-279 (327)
78 3qd2_B Eukaryotic translation 100.0 3.7E-40 1.3E-44 344.0 20.1 241 349-611 9-325 (332)
79 2bdw_A Hypothetical protein K1 100.0 2.5E-40 8.6E-45 349.8 19.0 245 348-612 31-285 (362)
80 4dc2_A Protein kinase C IOTA t 100.0 5.5E-40 1.9E-44 349.8 21.6 240 350-606 56-307 (396)
81 3kn6_A Ribosomal protein S6 ki 100.0 1.7E-40 5.8E-45 346.0 17.1 245 351-611 16-270 (325)
82 3kex_A Receptor tyrosine-prote 100.0 8.1E-41 2.8E-45 348.6 14.5 247 350-619 17-277 (325)
83 4f0f_A Serine/threonine-protei 100.0 4.6E-40 1.6E-44 336.4 19.8 246 351-616 24-287 (287)
84 3kmu_A ILK, integrin-linked ki 100.0 2.7E-40 9.4E-45 334.7 17.7 248 350-618 14-270 (271)
85 3g2f_A Bone morphogenetic prot 100.0 3.3E-40 1.1E-44 345.4 18.9 266 351-627 18-327 (336)
86 3c1x_A Hepatocyte growth facto 100.0 4.3E-40 1.5E-44 349.2 20.0 254 350-625 93-362 (373)
87 1rjb_A FL cytokine receptor; k 100.0 1.3E-40 4.4E-45 349.8 15.7 256 349-621 48-337 (344)
88 1fot_A TPK1 delta, CAMP-depend 100.0 3.6E-40 1.2E-44 342.1 18.7 238 350-611 10-258 (318)
89 3gxj_A TGF-beta receptor type- 100.0 4.4E-42 1.5E-46 354.0 3.9 255 350-620 7-299 (303)
90 3pls_A Macrophage-stimulating 100.0 3.7E-40 1.3E-44 338.8 18.2 253 350-623 25-292 (298)
91 1mp8_A Focal adhesion kinase 1 100.0 2.8E-40 9.6E-45 337.0 16.9 248 349-619 18-277 (281)
92 1u59_A Tyrosine-protein kinase 100.0 8.2E-40 2.8E-44 334.7 20.2 248 352-622 16-276 (287)
93 4e5w_A Tyrosine-protein kinase 100.0 3.5E-40 1.2E-44 339.8 17.4 253 350-617 25-301 (302)
94 3llt_A Serine/threonine kinase 100.0 1.3E-40 4.3E-45 352.2 14.1 192 350-546 39-262 (360)
95 2ozo_A Tyrosine-protein kinase 100.0 6.5E-40 2.2E-44 369.6 20.8 244 353-619 343-599 (613)
96 2pvf_A Fibroblast growth facto 100.0 5.5E-40 1.9E-44 343.6 18.8 255 349-621 38-321 (334)
97 2v62_A Serine/threonine-protei 100.0 2.9E-40 9.8E-45 347.4 16.6 255 350-618 41-328 (345)
98 3sv0_A Casein kinase I-like; t 100.0 4.7E-40 1.6E-44 359.1 18.8 253 350-619 11-279 (483)
99 1ob3_A PFPK5, cell division co 100.0 1.5E-40 5.2E-45 340.3 13.9 250 350-611 6-280 (288)
100 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.4E-40 4.9E-45 350.0 14.0 238 350-611 27-280 (353)
101 3gni_B Strad alpha; kinase fol 100.0 1.6E-39 5.5E-44 347.4 22.1 262 350-617 29-341 (389)
102 2buj_A Serine/threonine-protei 100.0 8E-40 2.7E-44 339.6 18.8 257 350-623 33-311 (317)
103 3a8x_A Protein kinase C IOTA t 100.0 1E-39 3.5E-44 342.7 19.8 240 350-606 13-264 (345)
104 1b6c_B TGF-B superfamily recep 100.0 9.1E-40 3.1E-44 342.9 19.3 256 349-620 45-338 (342)
105 3o0g_A Cell division protein k 100.0 1.2E-39 3.9E-44 334.4 19.5 251 350-611 6-282 (292)
106 2x4f_A Myosin light chain kina 100.0 7.4E-40 2.5E-44 347.5 18.6 242 351-611 94-342 (373)
107 3uzp_A CKI-delta, CKID, casein 100.0 3.3E-39 1.1E-43 331.4 22.8 255 350-621 13-283 (296)
108 2pmi_A Negative RE, cyclin-dep 100.0 5E-40 1.7E-44 341.4 16.9 259 349-612 8-294 (317)
109 3lxl_A Tyrosine-protein kinase 100.0 1.8E-40 6.2E-45 346.2 13.2 256 350-620 27-305 (327)
110 1rdq_E PKA C-alpha, CAMP-depen 100.0 7E-40 2.4E-44 344.5 17.7 237 351-611 46-293 (350)
111 3f66_A Hepatocyte growth facto 100.0 1.1E-39 3.7E-44 335.5 18.8 251 350-622 29-295 (298)
112 3brb_A Proto-oncogene tyrosine 100.0 1.1E-39 3.9E-44 337.9 19.0 254 349-620 37-310 (313)
113 4eut_A Serine/threonine-protei 100.0 1.1E-39 3.7E-44 349.5 19.1 265 350-619 13-310 (396)
114 1u5q_A Serine/threonine protei 100.0 1.6E-39 5.5E-44 341.7 19.9 244 348-613 56-307 (348)
115 3ork_A Serine/threonine protei 100.0 5.1E-40 1.7E-44 340.3 15.8 251 350-620 16-283 (311)
116 3lzb_A Epidermal growth factor 100.0 5.3E-40 1.8E-44 342.6 15.9 247 350-619 19-279 (327)
117 1kob_A Twitchin; kinase, intra 100.0 1.7E-39 5.8E-44 345.8 20.0 245 349-612 54-305 (387)
118 1xjd_A Protein kinase C, theta 100.0 3.9E-40 1.3E-44 345.4 14.9 237 350-610 21-268 (345)
119 2w4o_A Calcium/calmodulin-depe 100.0 8.8E-40 3E-44 344.0 17.6 242 350-611 57-305 (349)
120 1nxk_A MAP kinase-activated pr 100.0 2.7E-39 9.3E-44 346.4 21.6 243 352-612 68-322 (400)
121 3dls_A PAS domain-containing s 100.0 7.4E-40 2.5E-44 342.6 16.7 235 348-612 26-275 (335)
122 4hgt_A Casein kinase I isoform 100.0 4.2E-39 1.4E-43 330.4 22.0 255 349-620 12-282 (296)
123 2y94_A 5'-AMP-activated protei 100.0 1.9E-39 6.5E-44 353.7 20.5 238 350-611 20-266 (476)
124 3v8s_A RHO-associated protein 100.0 4.8E-40 1.6E-44 352.1 15.5 241 351-612 74-330 (410)
125 2wqm_A Serine/threonine-protei 100.0 1.1E-39 3.6E-44 337.6 17.6 255 350-620 36-299 (310)
126 1byg_A CSK, protein (C-termina 100.0 3.2E-40 1.1E-44 336.0 13.5 249 349-620 24-275 (278)
127 3e7e_A HBUB1, BUB1A, mitotic c 100.0 5.1E-40 1.7E-44 348.2 15.4 245 350-619 69-340 (365)
128 3lxp_A Non-receptor tyrosine-p 100.0 6.3E-40 2.1E-44 340.8 15.7 261 350-619 35-311 (318)
129 3a62_A Ribosomal protein S6 ki 100.0 9.8E-40 3.4E-44 340.6 17.1 238 350-611 21-276 (327)
130 4fl3_A Tyrosine-protein kinase 100.0 1.2E-39 4.1E-44 368.3 19.2 243 352-618 375-631 (635)
131 3og7_A AKAP9-BRAF fusion prote 100.0 1.2E-39 4.2E-44 333.7 17.5 249 350-618 28-288 (289)
132 3p1a_A MYT1 kinase, membrane-a 100.0 6.9E-39 2.4E-43 331.8 23.2 239 347-611 58-304 (311)
133 2a19_B Interferon-induced, dou 100.0 1.1E-39 3.7E-44 332.8 16.8 243 349-620 14-276 (284)
134 2h34_A Serine/threonine-protei 100.0 3.3E-39 1.1E-43 333.9 20.7 250 350-620 38-298 (309)
135 2a2a_A Death-associated protei 100.0 3.2E-39 1.1E-43 335.8 20.4 244 348-611 14-272 (321)
136 4agu_A Cyclin-dependent kinase 100.0 9.7E-40 3.3E-44 338.0 16.2 254 350-612 7-285 (311)
137 2ac3_A MAP kinase-interacting 100.0 4.1E-39 1.4E-43 334.1 20.7 247 352-611 19-295 (316)
138 2yex_A Serine/threonine-protei 100.0 5.7E-39 2E-43 326.1 21.2 242 349-611 10-261 (276)
139 1fvr_A Tyrosine-protein kinase 100.0 3.3E-39 1.1E-43 336.6 19.8 254 350-621 29-303 (327)
140 1xbb_A Tyrosine-protein kinase 100.0 3.4E-39 1.2E-43 330.7 19.5 245 353-621 24-282 (291)
141 2eue_A Carbon catabolite derep 100.0 1.8E-39 6.3E-44 329.9 17.3 237 351-612 18-263 (275)
142 3is5_A Calcium-dependent prote 100.0 9.5E-40 3.2E-44 333.9 15.3 245 349-611 25-278 (285)
143 3fdn_A Serine/threonine-protei 100.0 1.8E-39 6.1E-44 330.6 17.2 240 350-613 13-259 (279)
144 2i0e_A Protein kinase C-beta I 100.0 1.8E-39 6E-44 341.5 17.7 238 350-611 24-276 (353)
145 3cc6_A Protein tyrosine kinase 100.0 1.5E-39 5.3E-44 331.5 16.7 247 350-619 16-274 (281)
146 3ll6_A Cyclin G-associated kin 100.0 4.5E-40 1.6E-44 344.1 12.6 248 350-620 32-310 (337)
147 2xir_A Vascular endothelial gr 100.0 6.4E-40 2.2E-44 340.0 13.6 255 349-620 30-312 (316)
148 3f3z_A Calcium/calmodulin-depe 100.0 4.1E-39 1.4E-43 327.5 19.2 243 348-611 11-261 (277)
149 3dbq_A Dual specificity protei 100.0 1.2E-39 4E-44 342.5 15.5 241 350-613 13-275 (343)
150 3bhy_A Death-associated protei 100.0 6E-39 2E-43 327.3 20.1 252 349-620 8-276 (283)
151 1p4o_A Insulin-like growth fac 100.0 1.8E-39 6.3E-44 337.6 16.4 254 349-620 28-301 (322)
152 4aw2_A Serine/threonine-protei 100.0 1.1E-39 3.6E-44 352.1 14.9 245 350-612 78-339 (437)
153 3kk8_A Calcium/calmodulin depe 100.0 3.7E-39 1.3E-43 329.0 18.0 243 350-612 10-262 (284)
154 3cok_A Serine/threonine-protei 100.0 3.9E-39 1.3E-43 327.9 17.9 239 350-611 15-262 (278)
155 2qr7_A Ribosomal protein S6 ki 100.0 1.2E-39 4E-44 341.8 14.3 245 348-612 24-278 (342)
156 2zmd_A Dual specificity protei 100.0 5.2E-39 1.8E-43 343.2 19.4 240 350-612 60-321 (390)
157 1wak_A Serine/threonine-protei 100.0 4.8E-39 1.6E-43 344.3 18.9 258 349-611 40-391 (397)
158 3g33_A Cell division protein k 100.0 2E-39 6.8E-44 335.3 15.4 251 350-611 13-296 (308)
159 2acx_A G protein-coupled recep 100.0 7E-39 2.4E-43 354.1 20.7 243 351-611 189-444 (576)
160 3hko_A Calcium/calmodulin-depe 100.0 5.8E-39 2E-43 337.2 19.1 250 348-612 28-331 (345)
161 2owb_A Serine/threonine-protei 100.0 5.2E-39 1.8E-43 336.4 18.5 239 350-612 45-292 (335)
162 2i1m_A Macrophage colony-stimu 100.0 5.8E-40 2E-44 343.2 11.2 253 350-619 50-327 (333)
163 4ejn_A RAC-alpha serine/threon 100.0 1.6E-39 5.4E-44 353.8 15.0 239 349-611 151-404 (446)
164 2r5t_A Serine/threonine-protei 100.0 1.3E-39 4.6E-44 344.9 13.8 240 350-613 42-291 (373)
165 2w1i_A JAK2; chromosomal rearr 100.0 2.5E-39 8.5E-44 337.4 15.5 254 350-618 45-322 (326)
166 3byv_A Rhoptry kinase; malaria 100.0 1.8E-40 6.2E-45 353.2 6.9 236 351-611 78-359 (377)
167 3lm5_A Serine/threonine-protei 100.0 4.4E-39 1.5E-43 335.8 17.2 243 352-612 35-288 (327)
168 3i6u_A CDS1, serine/threonine- 100.0 1.1E-38 3.9E-43 343.8 20.7 243 349-611 138-399 (419)
169 3ttj_A Mitogen-activated prote 100.0 6.8E-39 2.3E-43 349.6 19.2 248 350-612 66-356 (464)
170 3oz6_A Mitogen-activated prote 100.0 1.1E-38 3.9E-43 340.7 20.5 189 350-546 13-234 (388)
171 2jii_A Serine/threonine-protei 100.0 3.3E-39 1.1E-43 340.2 16.2 255 350-620 46-338 (352)
172 3kvw_A DYRK2, dual specificity 100.0 2.5E-39 8.6E-44 349.9 15.6 192 350-546 101-302 (429)
173 1x8b_A WEE1HU, WEE1-like prote 100.0 5.6E-39 1.9E-43 327.9 17.2 241 349-611 14-279 (289)
174 2vd5_A DMPK protein; serine/th 100.0 2.2E-39 7.5E-44 347.2 14.4 243 351-612 66-328 (412)
175 3mwu_A Calmodulin-domain prote 100.0 1.3E-38 4.5E-43 350.4 20.2 244 348-612 24-277 (486)
176 2yfx_A Tyrosine-protein kinase 100.0 5.9E-39 2E-43 334.7 16.1 252 350-619 34-305 (327)
177 3c4z_A Rhodopsin kinase; Ser/T 100.0 2.3E-38 7.8E-43 349.1 21.5 240 351-606 190-438 (543)
178 2rku_A Serine/threonine-protei 100.0 1.7E-38 5.8E-43 326.0 19.2 239 350-612 19-266 (294)
179 1z57_A Dual specificity protei 100.0 6.8E-39 2.3E-43 335.3 16.4 255 350-612 18-329 (339)
180 3eqc_A Dual specificity mitoge 100.0 7.4E-39 2.5E-43 338.6 16.8 190 351-546 38-233 (360)
181 2jam_A Calcium/calmodulin-depe 100.0 1.2E-38 4.1E-43 328.8 17.9 244 349-612 12-262 (304)
182 2clq_A Mitogen-activated prote 100.0 1.6E-38 5.6E-43 326.0 18.8 242 352-611 28-278 (295)
183 2vgo_A Serine/threonine-protei 100.0 1.1E-38 3.6E-43 325.8 17.3 239 350-612 18-263 (284)
184 1t4h_A Serine/threonine-protei 100.0 1E-38 3.5E-43 326.9 17.0 240 351-611 31-282 (290)
185 3a7i_A MST3 kinase, serine/thr 100.0 2.4E-38 8.1E-43 326.4 19.8 241 350-614 26-273 (303)
186 2y7j_A Phosphorylase B kinase 100.0 2E-38 6.7E-43 335.9 19.6 242 350-611 98-359 (365)
187 4aaa_A Cyclin-dependent kinase 100.0 1.5E-38 5E-43 332.4 18.3 254 350-612 29-307 (331)
188 3rp9_A Mitogen-activated prote 100.0 2.2E-38 7.5E-43 346.1 20.3 183 350-539 57-280 (458)
189 3mtl_A Cell division protein k 100.0 2.6E-39 8.9E-44 337.0 11.9 253 350-611 6-281 (324)
190 3nsz_A CK II alpha, casein kin 100.0 4.7E-38 1.6E-42 328.2 21.4 249 350-611 40-319 (330)
191 2h6d_A 5'-AMP-activated protei 100.0 1.6E-38 5.4E-43 323.0 17.3 239 350-612 15-262 (276)
192 1q8y_A SR protein kinase; tran 100.0 4.2E-38 1.4E-42 334.3 21.2 258 350-612 23-334 (373)
193 3mi9_A Cell division protein k 100.0 1.3E-38 4.3E-43 335.7 16.8 254 350-612 21-312 (351)
194 3q60_A ROP5B; pseudokinase, tr 100.0 1.6E-39 5.6E-44 345.1 10.1 246 350-611 66-352 (371)
195 1vzo_A Ribosomal protein S6 ki 100.0 6.5E-39 2.2E-43 338.3 14.6 245 349-613 57-323 (355)
196 3q5i_A Protein kinase; CDPK, m 100.0 1.9E-38 6.6E-43 350.6 19.0 242 350-612 40-302 (504)
197 3com_A Serine/threonine-protei 100.0 2.1E-38 7.3E-43 328.4 18.1 241 350-611 33-278 (314)
198 1u46_A ACK-1, activated CDC42 100.0 2.6E-39 9E-44 331.2 11.1 249 350-620 22-286 (291)
199 3lij_A Calcium/calmodulin depe 100.0 2E-38 6.8E-43 349.6 18.8 244 348-612 39-292 (494)
200 1cm8_A Phosphorylated MAP kina 100.0 4.1E-38 1.4E-42 333.6 20.5 249 350-612 29-308 (367)
201 3nyv_A Calmodulin-domain prote 100.0 1E-38 3.5E-43 351.3 16.2 244 348-612 28-282 (484)
202 2pml_X PFPK7, Ser/Thr protein 100.0 2.9E-38 9.8E-43 332.3 18.9 252 350-611 35-322 (348)
203 3rgf_A Cyclin-dependent kinase 100.0 2.6E-38 8.8E-43 340.0 18.8 194 351-547 26-240 (405)
204 2wtk_C Serine/threonine-protei 100.0 9.3E-38 3.2E-42 322.1 21.3 240 350-612 9-264 (305)
205 3n9x_A Phosphotransferase; mal 100.0 6.2E-38 2.1E-42 339.6 20.8 188 350-544 30-253 (432)
206 3gbz_A Kinase, CMGC CDK; ssgci 100.0 3E-39 1E-43 337.3 10.0 249 350-611 38-318 (329)
207 1ua2_A CAK, cell division prot 100.0 1.9E-38 6.5E-43 333.6 16.0 253 348-612 12-292 (346)
208 2y4i_B KSR2, HKSR2, kinase sup 100.0 8.9E-39 3E-43 331.9 13.3 247 350-620 37-304 (319)
209 2ycf_A Serine/threonine-protei 100.0 5.2E-38 1.8E-42 326.8 19.0 244 348-611 12-274 (322)
210 2x7f_A TRAF2 and NCK-interacti 100.0 2.1E-38 7.1E-43 330.3 15.9 242 350-611 28-286 (326)
211 2j7t_A Serine/threonine-protei 100.0 1.4E-38 4.7E-43 327.8 13.7 242 350-611 23-275 (302)
212 2vwi_A Serine/threonine-protei 100.0 7E-39 2.4E-43 330.0 11.4 253 350-611 19-287 (303)
213 3pg1_A Mitogen-activated prote 100.0 8.1E-38 2.8E-42 330.9 19.8 250 351-612 27-317 (362)
214 2r3i_A Cell division protein k 100.0 1.8E-38 6.3E-43 326.4 14.4 250 351-611 8-283 (299)
215 3fme_A Dual specificity mitoge 100.0 8E-39 2.7E-43 327.5 11.5 244 350-611 11-266 (290)
216 2w5a_A Serine/threonine-protei 100.0 9.2E-39 3.1E-43 325.2 11.8 249 350-616 10-272 (279)
217 2xrw_A Mitogen-activated prote 100.0 7.5E-38 2.6E-42 332.2 18.8 248 350-612 29-319 (371)
218 3pfq_A PKC-B, PKC-beta, protei 100.0 4.1E-38 1.4E-42 358.2 17.2 238 350-611 345-597 (674)
219 2j0j_A Focal adhesion kinase 1 100.0 8E-38 2.7E-42 354.7 19.3 248 348-618 392-651 (656)
220 2fst_X Mitogen-activated prote 100.0 7.4E-38 2.5E-42 331.4 17.6 249 350-612 33-312 (367)
221 2eu9_A Dual specificity protei 100.0 4.7E-38 1.6E-42 331.3 15.6 254 350-611 23-333 (355)
222 2vx3_A Dual specificity tyrosi 100.0 6.8E-38 2.3E-42 334.0 16.8 192 350-546 58-261 (382)
223 3qyz_A Mitogen-activated prote 100.0 7.4E-38 2.5E-42 331.5 16.9 252 350-612 31-314 (364)
224 3an0_A Dual specificity mitoge 100.0 2E-38 6.8E-43 332.6 12.4 244 350-611 55-310 (340)
225 3e3p_A Protein kinase, putativ 100.0 1.8E-37 6.2E-42 327.8 19.4 259 350-617 27-322 (360)
226 1blx_A Cyclin-dependent kinase 100.0 5.2E-38 1.8E-42 327.2 14.7 251 350-611 15-296 (326)
227 4exu_A Mitogen-activated prote 100.0 3.5E-37 1.2E-41 327.1 21.3 248 350-612 46-324 (371)
228 1phk_A Phosphorylase kinase; g 100.0 8.6E-38 3E-42 321.2 16.0 242 350-611 21-283 (298)
229 4e7w_A Glycogen synthase kinas 100.0 1.1E-37 3.7E-42 333.5 16.5 251 350-612 44-322 (394)
230 2wei_A Calmodulin-domain prote 100.0 3E-37 1E-41 315.6 18.6 242 349-611 25-276 (287)
231 2rio_A Serine/threonine-protei 100.0 1.4E-37 4.7E-42 337.0 17.0 244 351-611 20-295 (434)
232 3fhr_A MAP kinase-activated pr 100.0 2.3E-37 7.9E-42 323.9 18.1 245 351-612 34-288 (336)
233 3eb0_A Putative uncharacterize 100.0 1.2E-37 4.3E-42 332.1 16.3 256 350-617 11-329 (383)
234 1zy4_A Serine/threonine-protei 100.0 1.7E-37 6E-42 319.3 16.8 242 349-611 9-283 (303)
235 1j1b_A Glycogen synthase kinas 100.0 1.2E-37 4E-42 336.1 15.4 256 350-617 58-344 (420)
236 3coi_A Mitogen-activated prote 100.0 1.6E-37 5.5E-42 327.5 15.5 247 351-612 29-306 (353)
237 2i6l_A Mitogen-activated prote 100.0 4E-37 1.4E-41 319.3 17.9 249 350-612 15-306 (320)
238 3cek_A Dual specificity protei 100.0 3.2E-37 1.1E-41 319.5 17.0 241 350-613 32-294 (313)
239 2b9h_A MAP kinase FUS3, mitoge 100.0 4.7E-37 1.6E-41 323.7 18.4 250 350-611 15-305 (353)
240 3aln_A Dual specificity mitoge 100.0 1.1E-37 3.8E-42 325.0 12.9 247 351-611 27-285 (327)
241 3a99_A Proto-oncogene serine/t 100.0 1.1E-37 3.8E-42 324.1 12.6 233 350-612 47-294 (320)
242 3uqc_A Probable conserved tran 100.0 4.3E-37 1.5E-41 314.2 16.0 227 351-620 36-267 (286)
243 2dyl_A Dual specificity mitoge 100.0 7E-37 2.4E-41 317.4 15.7 243 349-611 28-283 (318)
244 2iwi_A Serine/threonine-protei 100.0 3.1E-37 1.1E-41 319.4 12.9 234 349-612 34-284 (312)
245 3p23_A Serine/threonine-protei 100.0 1.4E-36 4.8E-41 328.3 17.0 238 351-611 29-283 (432)
246 2pzi_A Probable serine/threoni 100.0 1.2E-36 4E-41 348.3 15.7 234 350-617 84-327 (681)
247 3dzo_A Rhoptry kinase domain; 100.0 1.3E-36 4.6E-41 327.0 13.4 235 351-610 83-362 (413)
248 3qa8_A MGC80376 protein; kinas 100.0 1.6E-36 5.3E-41 338.5 10.3 263 349-619 17-310 (676)
249 3m2w_A MAP kinase-activated pr 100.0 5.1E-35 1.7E-39 300.9 17.9 225 352-612 24-257 (299)
250 2vuw_A Serine/threonine-protei 100.0 1.9E-35 6.5E-40 309.4 10.3 239 347-610 21-329 (336)
251 4azs_A Methyltransferase WBDD; 100.0 1.6E-29 5.5E-34 281.5 7.2 180 354-543 242-438 (569)
252 1ogq_A PGIP-2, polygalacturona 100.0 1.8E-28 6.1E-33 253.7 13.3 186 25-211 2-198 (313)
253 3en9_A Glycoprotease, O-sialog 99.9 2.3E-26 7.7E-31 254.7 8.6 177 351-544 341-539 (540)
254 3rgz_A Protein brassinosteroid 99.9 9.5E-26 3.2E-30 261.6 9.9 183 26-211 9-223 (768)
255 4eco_A Uncharacterized protein 99.9 1.4E-25 4.8E-30 254.4 6.4 184 27-214 28-333 (636)
256 4ecn_A Leucine-rich repeat pro 99.9 4.4E-25 1.5E-29 255.5 5.7 183 26-214 266-576 (876)
257 1zar_A RIO2 kinase; serine kin 99.9 5.8E-23 2E-27 208.6 9.2 139 351-516 95-252 (282)
258 4fcg_A Uncharacterized protein 99.9 4.4E-23 1.5E-27 214.5 7.2 185 25-214 23-232 (328)
259 3rgz_A Protein brassinosteroid 99.9 2.7E-22 9.3E-27 232.6 9.4 162 69-231 515-750 (768)
260 3m19_A Variable lymphocyte rec 99.8 3.1E-21 1.1E-25 192.6 12.8 169 54-223 3-194 (251)
261 3e6j_A Variable lymphocyte rec 99.8 1.1E-20 3.6E-25 186.0 11.6 155 48-204 11-176 (229)
262 2o6q_A Variable lymphocyte rec 99.8 3.1E-20 1.1E-24 187.5 13.3 145 69-214 38-184 (270)
263 1ogq_A PGIP-2, polygalacturona 99.8 7E-21 2.4E-25 196.6 7.3 160 68-229 125-312 (313)
264 2v70_A SLIT-2, SLIT homolog 2 99.8 2.2E-20 7.5E-25 182.5 10.2 133 70-202 34-168 (220)
265 2o6s_A Variable lymphocyte rec 99.8 5.4E-20 1.8E-24 178.1 11.6 151 53-204 4-165 (208)
266 2v9t_B SLIT homolog 2 protein 99.8 1.4E-19 4.9E-24 176.7 10.2 148 73-224 16-168 (220)
267 2xot_A Amphoterin-induced prot 99.8 1.1E-19 3.7E-24 191.5 7.3 173 52-225 14-206 (361)
268 2v9t_B SLIT homolog 2 protein 99.8 6.9E-19 2.4E-23 171.8 12.4 150 52-202 7-167 (220)
269 1zth_A RIO1 serine protein kin 99.8 3.4E-19 1.2E-23 178.5 9.2 134 351-497 52-219 (258)
270 2v70_A SLIT-2, SLIT homolog 2 99.8 7.7E-19 2.6E-23 171.5 11.5 160 56-225 5-170 (220)
271 3rfs_A Internalin B, repeat mo 99.8 1.5E-18 5E-23 175.4 13.2 154 68-224 63-221 (272)
272 1w8a_A SLIT protein; signaling 99.8 3.5E-19 1.2E-23 170.0 5.8 150 72-225 12-166 (192)
273 3e6j_A Variable lymphocyte rec 99.7 3.4E-18 1.1E-22 168.1 11.8 159 57-224 13-175 (229)
274 1ozn_A Reticulon 4 receptor; N 99.7 2.7E-18 9.2E-23 174.6 10.5 144 69-213 57-203 (285)
275 1p9a_G Platelet glycoprotein I 99.7 5.8E-18 2E-22 172.6 12.3 132 90-223 74-210 (290)
276 2z80_A TOLL-like receptor 2, v 99.7 2.6E-18 8.9E-23 180.4 8.5 165 48-214 22-201 (353)
277 2z66_A Variable lymphocyte rec 99.7 4E-18 1.4E-22 175.2 9.4 131 70-202 80-214 (306)
278 4fcg_A Uncharacterized protein 99.7 3.6E-18 1.2E-22 177.4 8.9 148 68-219 127-288 (328)
279 1w8a_A SLIT protein; signaling 99.7 6.9E-18 2.4E-22 161.0 10.1 171 53-223 5-185 (192)
280 2z81_A CD282 antigen, TOLL-lik 99.7 3.5E-18 1.2E-22 190.4 8.6 158 55-214 3-175 (549)
281 3m19_A Variable lymphocyte rec 99.7 2E-17 6.8E-22 164.9 11.6 134 68-202 59-194 (251)
282 4g8a_A TOLL-like receptor 4; l 99.7 5.5E-18 1.9E-22 191.9 8.4 145 68-213 52-199 (635)
283 2z66_A Variable lymphocyte rec 99.7 4.3E-18 1.5E-22 175.0 6.5 160 53-214 4-178 (306)
284 2o6s_A Variable lymphocyte rec 99.7 6.5E-17 2.2E-21 156.3 14.1 156 60-224 4-164 (208)
285 3v47_A TOLL-like receptor 5B a 99.7 9.8E-18 3.4E-22 182.2 8.9 157 54-211 6-178 (455)
286 3rfs_A Internalin B, repeat mo 99.7 2.4E-17 8.3E-22 166.4 11.1 138 66-204 83-222 (272)
287 1ozn_A Reticulon 4 receptor; N 99.7 2.7E-17 9.2E-22 167.2 11.5 150 68-218 32-187 (285)
288 2o6q_A Variable lymphocyte rec 99.7 4.5E-17 1.5E-21 164.2 12.6 161 53-218 2-167 (270)
289 2o6r_A Variable lymphocyte rec 99.7 2.7E-17 9.3E-22 154.7 10.2 134 55-204 6-141 (177)
290 3oja_B Anopheles plasmodium-re 99.7 1.4E-17 4.8E-22 187.4 9.2 173 45-218 8-202 (597)
291 4b8c_D Glucose-repressible alc 99.7 4.6E-18 1.6E-22 194.9 5.1 180 26-210 129-339 (727)
292 3j0a_A TOLL-like receptor 5; m 99.7 1.7E-17 5.8E-22 194.3 9.7 138 89-226 422-565 (844)
293 3vq2_A TLR4, TOLL-like recepto 99.7 1.7E-17 5.7E-22 187.3 9.2 157 69-226 400-563 (606)
294 2z62_A TOLL-like receptor 4, v 99.7 3.3E-17 1.1E-21 165.8 10.3 155 70-225 54-241 (276)
295 3zyi_A Leucine-rich repeat-con 99.7 4.1E-17 1.4E-21 177.3 11.3 156 58-214 56-245 (452)
296 2z62_A TOLL-like receptor 4, v 99.7 3E-17 1E-21 166.0 9.6 143 69-212 29-174 (276)
297 3o6n_A APL1; leucine-rich repe 99.7 1.8E-17 6.1E-22 176.5 7.8 171 47-218 4-196 (390)
298 2ell_A Acidic leucine-rich nuc 99.7 2.6E-17 8.9E-22 153.4 7.3 135 68-206 24-165 (168)
299 3vq2_A TLR4, TOLL-like recepto 99.7 3.1E-17 1.1E-21 185.0 9.1 158 54-212 5-178 (606)
300 2id5_A Lingo-1, leucine rich r 99.7 3.8E-17 1.3E-21 178.8 9.3 157 57-214 12-179 (477)
301 1p9a_G Platelet glycoprotein I 99.7 9.8E-17 3.4E-21 163.5 10.4 148 68-219 31-183 (290)
302 3t6q_A CD180 antigen; protein- 99.7 5.7E-17 2E-21 182.9 9.6 156 58-214 14-180 (606)
303 3zyj_A Leucine-rich repeat-con 99.7 1E-16 3.5E-21 173.5 10.9 155 58-213 45-233 (440)
304 3v47_A TOLL-like receptor 5B a 99.7 1.1E-16 3.9E-21 173.8 10.7 132 93-224 275-411 (455)
305 3zyj_A Leucine-rich repeat-con 99.7 1.8E-16 6E-21 171.7 11.7 157 69-226 89-297 (440)
306 3zyi_A Leucine-rich repeat-con 99.7 1.5E-16 5.2E-21 172.8 11.0 157 68-225 99-307 (452)
307 2wfh_A SLIT homolog 2 protein 99.7 1.5E-16 5E-21 151.9 9.3 126 72-202 14-141 (193)
308 4glp_A Monocyte differentiatio 99.7 1.6E-16 5.3E-21 163.7 10.1 147 70-219 147-305 (310)
309 3t6q_A CD180 antigen; protein- 99.7 1.3E-16 4.6E-21 179.9 9.7 145 68-213 376-526 (606)
310 4g8a_A TOLL-like receptor 4; l 99.6 1.7E-16 5.9E-21 179.5 10.2 157 69-225 421-584 (635)
311 3j0a_A TOLL-like receptor 5; m 99.6 2.1E-16 7.3E-21 185.0 10.9 161 56-219 14-185 (844)
312 2je0_A Acidic leucine-rich nuc 99.6 6.9E-17 2.4E-21 147.2 5.1 126 68-196 17-149 (149)
313 4ezg_A Putative uncharacterize 99.6 1.1E-16 3.7E-21 153.4 6.7 143 70-219 46-192 (197)
314 4eco_A Uncharacterized protein 99.6 5.4E-17 1.8E-21 183.9 4.8 149 68-219 206-388 (636)
315 2xwt_C Thyrotropin receptor; s 99.6 1.7E-16 5.8E-21 156.9 7.8 146 69-218 32-189 (239)
316 1ziw_A TOLL-like receptor 3; i 99.6 5.2E-16 1.8E-20 177.5 12.3 156 70-226 456-627 (680)
317 4gyi_A RIO2 kinase; protein ki 99.6 5.2E-16 1.8E-20 161.6 10.9 134 350-497 99-265 (397)
318 3a79_B TLR6, VLRB.59, TOLL-lik 99.6 2.5E-16 8.4E-21 176.1 9.0 155 67-225 352-514 (562)
319 2z7x_B TOLL-like receptor 1, v 99.6 1.7E-16 5.9E-21 175.5 7.0 134 70-207 304-440 (520)
320 1wwl_A Monocyte differentiatio 99.6 6E-17 2.1E-21 167.0 3.0 129 70-200 65-214 (312)
321 1ziw_A TOLL-like receptor 3; i 99.6 2.8E-16 9.5E-21 179.8 8.4 162 56-218 4-181 (680)
322 3oja_A Leucine-rich immune mol 99.6 1.7E-16 5.8E-21 173.8 5.9 150 68-224 99-253 (487)
323 1wwl_A Monocyte differentiatio 99.6 1E-16 3.5E-21 165.2 3.9 135 69-204 96-245 (312)
324 1xku_A Decorin; proteoglycan, 99.6 1.4E-15 4.8E-20 158.0 12.2 157 53-212 28-217 (330)
325 2ft3_A Biglycan; proteoglycan, 99.6 7.3E-16 2.5E-20 160.2 9.9 158 55-218 32-203 (332)
326 3cvr_A Invasion plasmid antige 99.6 2.7E-16 9.1E-21 174.1 6.9 151 47-219 34-191 (571)
327 2z63_A TOLL-like receptor 4, v 99.6 6.2E-16 2.1E-20 172.9 9.9 156 68-225 373-535 (570)
328 4ecn_A Leucine-rich repeat pro 99.6 2.1E-16 7.2E-21 183.0 6.3 148 68-219 448-630 (876)
329 2id5_A Lingo-1, leucine rich r 99.6 6.3E-16 2.1E-20 169.1 9.5 146 68-214 56-203 (477)
330 4ezg_A Putative uncharacterize 99.6 7.2E-16 2.5E-20 147.6 8.7 129 68-201 66-195 (197)
331 2xot_A Amphoterin-induced prot 99.6 1.9E-15 6.6E-20 159.0 12.4 142 54-206 10-154 (361)
332 3oja_B Anopheles plasmodium-re 99.6 1.2E-15 4.1E-20 171.7 10.9 111 69-180 76-186 (597)
333 3oja_A Leucine-rich immune mol 99.6 5.3E-16 1.8E-20 169.9 7.1 141 69-213 59-216 (487)
334 2xwt_C Thyrotropin receptor; s 99.6 7E-16 2.4E-20 152.4 6.8 144 68-213 55-207 (239)
335 2wfh_A SLIT homolog 2 protein 99.6 2.4E-15 8.1E-20 143.4 9.7 126 96-225 13-143 (193)
336 4glp_A Monocyte differentiatio 99.6 5.7E-16 2E-20 159.5 5.7 141 70-210 93-247 (310)
337 1xku_A Decorin; proteoglycan, 99.6 3.8E-15 1.3E-19 154.7 11.7 140 69-213 122-265 (330)
338 2je0_A Acidic leucine-rich nuc 99.6 4.8E-16 1.6E-20 141.6 4.3 123 91-215 15-144 (149)
339 2ell_A Acidic leucine-rich nuc 99.6 1.3E-15 4.3E-20 141.9 7.1 125 90-216 21-152 (168)
340 2ft3_A Biglycan; proteoglycan, 99.6 4.5E-15 1.5E-19 154.3 11.9 144 70-219 125-275 (332)
341 2z63_A TOLL-like receptor 4, v 99.6 2.1E-15 7E-20 168.7 9.8 138 68-205 396-536 (570)
342 3o6n_A APL1; leucine-rich repe 99.6 3.8E-15 1.3E-19 158.4 11.3 111 69-180 70-180 (390)
343 2z81_A CD282 antigen, TOLL-lik 99.6 8.2E-16 2.8E-20 171.2 6.1 153 70-224 336-513 (549)
344 3o53_A Protein LRIM1, AGAP0063 99.6 2.1E-15 7.2E-20 155.7 6.7 115 92-209 119-235 (317)
345 1h6t_A Internalin B; cell adhe 99.6 6.4E-15 2.2E-19 150.1 9.9 134 69-213 69-202 (291)
346 4b8c_D Glucose-repressible alc 99.6 2.9E-16 9.9E-21 179.9 -0.3 140 67-211 223-365 (727)
347 2z7x_B TOLL-like receptor 1, v 99.5 4.4E-15 1.5E-19 164.2 8.4 148 69-219 248-432 (520)
348 3a79_B TLR6, VLRB.59, TOLL-lik 99.5 9.5E-15 3.3E-19 163.1 10.9 124 90-214 350-476 (562)
349 3g39_A Variable lymphocyte rec 99.5 8.3E-15 2.8E-19 136.6 8.5 107 71-181 12-118 (170)
350 1a9n_A U2A', U2A'; complex (nu 99.5 2.6E-15 8.9E-20 140.9 5.0 126 69-200 20-153 (176)
351 2r9u_A Variable lymphocyte rec 99.5 1.1E-14 3.9E-19 136.2 9.3 118 55-182 5-122 (174)
352 3o53_A Protein LRIM1, AGAP0063 99.5 2.8E-15 9.7E-20 154.8 5.0 143 68-214 120-265 (317)
353 1ds9_A Outer arm dynein; leuci 99.5 5.3E-17 1.8E-21 155.6 -7.5 143 69-216 19-179 (198)
354 1h6u_A Internalin H; cell adhe 99.5 1.3E-14 4.4E-19 149.1 9.8 141 68-219 63-206 (308)
355 1h6u_A Internalin H; cell adhe 99.5 1.2E-14 4.2E-19 149.3 9.7 122 70-200 43-164 (308)
356 2o6r_A Variable lymphocyte rec 99.5 9.5E-15 3.2E-19 137.2 7.8 113 69-182 29-141 (177)
357 3g39_A Variable lymphocyte rec 99.5 1.7E-14 5.9E-19 134.5 9.3 107 95-204 11-119 (170)
358 1dce_A Protein (RAB geranylger 99.5 6.9E-15 2.4E-19 163.5 7.7 104 95-203 443-549 (567)
359 4ay9_X Follicle-stimulating ho 99.5 9.8E-15 3.3E-19 152.9 8.3 155 55-211 8-202 (350)
360 1xeu_A Internalin C; cellular 99.5 1.4E-14 4.7E-19 145.3 8.9 140 69-220 42-184 (263)
361 2z80_A TOLL-like receptor 2, v 99.5 2.6E-15 9E-20 157.4 3.1 150 68-219 76-233 (353)
362 1h6t_A Internalin B; cell adhe 99.5 2.2E-14 7.5E-19 146.1 9.4 134 69-214 47-181 (291)
363 1m9s_A Internalin B; cell inva 99.5 3.2E-14 1.1E-18 159.1 10.3 141 68-219 65-208 (605)
364 2r9u_A Variable lymphocyte rec 99.5 4.2E-14 1.4E-18 132.3 9.4 105 95-202 14-120 (174)
365 1o6v_A Internalin A; bacterial 99.5 7.9E-14 2.7E-18 151.9 9.7 133 69-212 222-354 (466)
366 3g06_A SSPH2 (leucine-rich rep 99.5 3E-14 1E-18 159.6 6.3 151 47-218 13-171 (622)
367 3bz5_A Internalin-J, INLJ; leu 99.5 9.4E-14 3.2E-18 150.6 10.0 139 68-218 148-296 (457)
368 1a9n_A U2A', U2A'; complex (nu 99.5 3.1E-14 1.1E-18 133.5 5.3 123 88-215 14-144 (176)
369 4fmz_A Internalin; leucine ric 99.5 6.8E-14 2.3E-18 146.1 8.0 143 68-219 177-322 (347)
370 1xeu_A Internalin C; cellular 99.5 9.6E-14 3.3E-18 139.1 8.7 125 68-202 63-187 (263)
371 3cvr_A Invasion plasmid antige 99.4 1.6E-13 5.5E-18 151.8 10.3 117 69-205 81-197 (571)
372 1m9s_A Internalin B; cell inva 99.4 1.2E-13 4.1E-18 154.4 9.1 126 68-202 87-212 (605)
373 1o6v_A Internalin A; bacterial 99.4 1.3E-13 4.6E-18 150.1 8.7 142 68-220 243-387 (466)
374 1dce_A Protein (RAB geranylger 99.4 1.4E-13 4.7E-18 153.0 8.4 127 88-219 404-544 (567)
375 2ifg_A High affinity nerve gro 99.4 2.4E-13 8.1E-18 142.1 8.1 109 56-179 8-117 (347)
376 1jl5_A Outer protein YOPM; leu 99.4 6.5E-14 2.2E-18 151.8 3.7 102 68-179 11-125 (454)
377 3bz5_A Internalin-J, INLJ; leu 99.4 6.9E-13 2.4E-17 143.8 11.3 129 68-212 106-234 (457)
378 2ast_B S-phase kinase-associat 99.4 9.9E-15 3.4E-19 151.8 -4.0 141 68-210 70-221 (336)
379 4fmz_A Internalin; leucine ric 99.4 3.2E-13 1.1E-17 141.0 7.4 141 68-219 155-298 (347)
380 1jl5_A Outer protein YOPM; leu 99.4 9.8E-13 3.4E-17 142.5 11.5 128 69-213 112-239 (454)
381 2ast_B S-phase kinase-associat 99.4 1.5E-14 5.2E-19 150.4 -3.2 138 57-201 38-183 (336)
382 2ifg_A High affinity nerve gro 99.4 8.3E-13 2.8E-17 137.9 8.4 106 96-203 11-119 (347)
383 3goz_A Leucine-rich repeat-con 99.3 1.1E-13 3.9E-18 145.4 -1.2 136 70-205 24-185 (362)
384 2ca6_A RAN GTPase-activating p 99.3 6.9E-14 2.3E-18 148.5 -3.6 147 68-214 60-247 (386)
385 2ca6_A RAN GTPase-activating p 99.3 5E-14 1.7E-18 149.6 -5.0 134 68-202 94-259 (386)
386 3goz_A Leucine-rich repeat-con 99.3 2.2E-13 7.6E-18 143.2 -0.4 146 72-218 2-177 (362)
387 3g06_A SSPH2 (leucine-rich rep 99.3 7.8E-12 2.7E-16 140.0 11.1 94 69-179 62-155 (622)
388 1ds9_A Outer arm dynein; leuci 99.3 4.1E-14 1.4E-18 135.5 -7.8 128 89-220 14-152 (198)
389 3tm0_A Aminoglycoside 3'-phosp 99.2 4.1E-11 1.4E-15 119.7 11.5 133 352-495 20-212 (263)
390 4ay9_X Follicle-stimulating ho 99.2 2.8E-11 9.5E-16 126.5 9.4 141 61-210 7-152 (350)
391 3rw6_A Nuclear RNA export fact 99.2 3.1E-13 1E-17 134.1 -7.2 187 28-216 34-256 (267)
392 1z7x_W Ribonuclease inhibitor; 99.1 6.9E-13 2.4E-17 144.0 -6.5 152 68-219 227-409 (461)
393 1nd4_A Aminoglycoside 3'-phosp 99.1 3E-10 1E-14 113.1 11.5 126 355-495 29-213 (264)
394 1z7x_W Ribonuclease inhibitor; 99.1 1.1E-12 3.8E-17 142.4 -7.6 150 69-219 200-381 (461)
395 3dxp_A Putative acyl-COA dehyd 99.1 4.7E-10 1.6E-14 117.6 12.0 137 352-496 44-248 (359)
396 3un9_A NLR family member X1; l 99.0 4.6E-12 1.6E-16 133.3 -6.9 62 117-178 155-224 (372)
397 3sb4_A Hypothetical leucine ri 98.9 1.4E-09 4.8E-14 112.5 8.6 55 69-125 102-156 (329)
398 3un9_A NLR family member X1; l 98.9 1.8E-11 6.2E-16 128.7 -7.8 150 69-219 73-250 (372)
399 3sg8_A APH(2'')-ID; antibiotic 98.9 1.2E-09 4.2E-14 111.5 6.1 178 352-543 26-287 (304)
400 3sb4_A Hypothetical leucine ri 98.8 2.5E-09 8.5E-14 110.6 6.0 79 69-148 50-155 (329)
401 3ogk_B Coronatine-insensitive 98.6 8.1E-10 2.8E-14 123.8 -5.9 113 90-202 375-503 (592)
402 3ogk_B Coronatine-insensitive 98.6 4E-09 1.4E-13 118.1 -0.9 137 70-208 140-290 (592)
403 3rw6_A Nuclear RNA export fact 98.6 1.1E-09 3.7E-14 108.6 -5.0 111 81-193 129-257 (267)
404 3r70_A Aminoglycoside phosphot 98.5 2.7E-07 9.4E-12 94.7 10.6 129 352-496 43-237 (320)
405 1io0_A Tropomodulin; LRR prote 98.5 2.9E-09 1E-13 100.2 -4.2 113 88-200 31-164 (185)
406 2p1m_B Transport inhibitor res 98.4 2.1E-08 7E-13 112.3 -3.0 125 90-215 102-239 (594)
407 3tdw_A Gentamicin resistance p 98.3 2.8E-06 9.5E-11 86.5 12.1 133 352-496 25-224 (306)
408 2p1m_B Transport inhibitor res 98.3 7.2E-09 2.5E-13 116.0 -8.4 109 92-201 371-495 (594)
409 3d1u_A Putative fructosamine-3 98.3 3.6E-06 1.2E-10 84.8 12.3 73 352-428 21-97 (288)
410 4gkh_A Aminoglycoside 3'-phosp 98.3 3.7E-06 1.2E-10 83.9 11.7 131 354-495 32-222 (272)
411 1io0_A Tropomodulin; LRR prote 98.3 3.5E-08 1.2E-12 92.8 -3.3 110 68-178 36-164 (185)
412 4fdw_A Leucine rich hypothetic 98.2 2.9E-06 1E-10 89.8 9.1 143 69-218 204-355 (401)
413 3ats_A Putative uncharacterize 98.2 2.8E-06 9.5E-11 88.5 8.6 79 352-430 26-122 (357)
414 3ovc_A Hygromycin-B 4-O-kinase 98.2 5.1E-06 1.7E-10 86.7 10.2 73 352-429 47-122 (362)
415 4fdw_A Leucine rich hypothetic 98.1 4.8E-06 1.7E-10 88.1 9.5 87 84-174 149-235 (401)
416 2ra8_A Uncharacterized protein 98.1 2.7E-07 9.2E-12 96.1 -1.0 111 88-201 167-293 (362)
417 2ra8_A Uncharacterized protein 98.1 8.3E-07 2.8E-11 92.4 1.9 136 68-208 172-328 (362)
418 2olc_A MTR kinase, methylthior 97.9 1.8E-05 6E-10 83.7 8.6 73 352-426 36-120 (397)
419 2q83_A YTAA protein; 2635576, 97.9 6.9E-05 2.3E-09 77.2 12.5 139 353-495 39-251 (346)
420 3e4g_A ATP synthase subunit S, 97.6 1.1E-05 3.6E-10 74.2 0.2 82 94-175 62-149 (176)
421 1zyl_A Hypothetical protein YI 97.5 0.001 3.6E-08 67.8 14.4 74 354-428 34-114 (328)
422 3dxq_A Choline/ethanolamine ki 97.5 0.00034 1.2E-08 70.7 9.7 70 352-428 24-95 (301)
423 2pyw_A Uncharacterized protein 97.4 0.00084 2.9E-08 71.3 13.0 73 467-540 233-313 (420)
424 3jr1_A Putative fructosamine-3 97.4 0.0019 6.3E-08 65.5 14.4 74 352-428 42-118 (312)
425 3f7w_A Putative fructosamine-3 97.3 0.00073 2.5E-08 67.8 9.6 73 352-428 21-97 (288)
426 3e4g_A ATP synthase subunit S, 97.2 6.1E-05 2.1E-09 69.1 1.0 85 69-154 62-153 (176)
427 2ppq_A HSK, HK, homoserine kin 97.2 0.0022 7.4E-08 65.3 11.8 142 352-495 28-216 (322)
428 3feg_A Choline/ethanolamine ki 97.1 0.0019 6.4E-08 67.3 10.8 140 352-495 56-253 (379)
429 4gt6_A Cell surface protein; l 97.0 0.0011 3.7E-08 69.8 7.6 112 85-200 257-370 (394)
430 4gt6_A Cell surface protein; l 97.0 0.00065 2.2E-08 71.5 5.8 125 70-200 267-391 (394)
431 3csv_A Aminoglycoside phosphot 96.9 0.0043 1.5E-07 63.4 11.5 30 467-496 184-217 (333)
432 1pgv_A TMD-1, tropomodulin TMD 96.9 5.3E-05 1.8E-09 70.9 -2.7 111 89-199 37-169 (197)
433 4h09_A Hypothetical leucine ri 96.9 0.0017 5.7E-08 67.8 8.3 122 88-213 212-335 (379)
434 1nw1_A Choline kinase (49.2 KD 96.9 0.0031 1.1E-07 67.0 10.4 72 352-428 79-159 (429)
435 3c5i_A Choline kinase; choline 96.9 0.0022 7.4E-08 66.8 8.8 73 352-428 39-121 (369)
436 4fs7_A Uncharacterized protein 96.9 0.0017 5.7E-08 68.3 7.9 83 112-197 292-376 (394)
437 2yle_A Protein spire homolog 1 96.8 0.014 4.9E-07 54.8 12.6 101 427-542 34-135 (229)
438 3rfe_A Platelet glycoprotein I 96.8 0.0011 3.8E-08 57.7 4.8 56 72-130 12-68 (130)
439 3rfe_A Platelet glycoprotein I 96.7 0.00081 2.8E-08 58.6 3.6 56 97-154 12-68 (130)
440 1pgv_A TMD-1, tropomodulin TMD 96.6 0.00015 5E-09 67.9 -2.3 110 68-178 41-170 (197)
441 4fs7_A Uncharacterized protein 96.6 0.0023 7.9E-08 67.2 6.2 89 84-175 288-376 (394)
442 2qg7_A Ethanolamine kinase PV0 96.5 0.016 5.4E-07 62.0 12.0 73 352-428 114-188 (458)
443 4h09_A Hypothetical leucine ri 96.3 0.011 3.7E-07 61.6 9.3 111 84-197 231-343 (379)
444 3i1a_A Spectinomycin phosphotr 95.9 0.07 2.4E-06 54.5 13.0 68 355-428 32-108 (339)
445 3mes_A Choline kinase; malaria 94.9 0.13 4.3E-06 54.3 11.2 72 353-428 77-157 (424)
446 3f2s_A CK, chetk-alpha, cholin 94.0 0.2 6.9E-06 52.2 10.1 29 467-495 245-279 (401)
447 2ks1_B Epidermal growth factor 93.1 0.058 2E-06 36.4 2.6 28 260-287 12-39 (44)
448 2l2t_A Receptor tyrosine-prote 92.8 0.058 2E-06 36.3 2.3 29 259-287 10-38 (44)
449 2k1k_A Ephrin type-A receptor 91.7 0.068 2.3E-06 34.9 1.5 30 255-284 7-36 (38)
450 3g15_A CK, chetk-alpha, cholin 89.3 0.84 2.9E-05 47.6 8.4 28 468-495 246-279 (401)
451 4ann_A ESSB; membrane protein, 88.8 2 6.7E-05 40.2 9.5 115 399-544 43-158 (215)
452 2jwa_A Receptor tyrosine-prote 88.1 0.24 8.2E-06 33.2 1.9 7 261-267 14-20 (44)
453 4ano_A ESSB; membrane protein, 83.3 4.1 0.00014 38.2 8.6 115 399-544 48-163 (219)
454 3cxl_A N-chimerin; SH2, RHO-GA 77.9 0.33 1.1E-05 51.7 -1.0 58 352-412 148-215 (463)
455 2klu_A T-cell surface glycopro 71.2 3.4 0.00012 30.0 3.2 18 264-281 12-29 (70)
456 2l8s_A Integrin alpha-1; trans 65.8 4.3 0.00015 28.4 2.7 26 257-282 8-33 (54)
457 2k9y_A Ephrin type-A receptor 63.9 1.4 4.9E-05 29.1 -0.0 10 262-271 16-25 (41)
458 2knc_A Integrin alpha-IIB; tra 63.5 5.6 0.00019 28.0 2.9 26 257-282 11-36 (54)
459 2l34_A TYRO protein tyrosine k 42.5 8 0.00027 24.2 0.8 26 257-282 5-30 (33)
460 2k1a_A Integrin alpha-IIB; sin 42.3 12 0.0004 24.8 1.7 24 257-280 9-32 (42)
461 2lz0_A Uncharacterized protein 39.6 42 0.0014 26.8 5.1 14 88-101 15-28 (100)
462 2jo1_A Phospholemman; FXYD1, N 38.2 23 0.00077 26.1 2.8 20 261-280 18-37 (72)
463 2klu_A T-cell surface glycopro 35.2 12 0.00041 27.2 0.9 28 260-287 12-39 (70)
464 3ls8_A Phosphatidylinositol 3- 34.2 3.5E+02 0.012 29.3 12.6 86 404-495 402-501 (614)
465 2lz0_A Uncharacterized protein 31.3 37 0.0013 27.1 3.5 14 112-125 15-28 (100)
466 2llm_A Amyloid beta A4 protein 32.6 14 0.00047 24.4 0.0 24 258-281 16-39 (43)
467 2jp3_A FXYD domain-containing 25.6 23 0.0008 25.8 1.1 17 261-277 19-35 (67)
468 2x6h_A GH13170P, VPS34, phosph 25.4 7.1E+02 0.024 27.4 15.7 45 446-495 529-575 (696)
469 1cja_A Protein (actin-fragmin 24.6 4.2E+02 0.014 26.3 10.2 76 415-497 156-238 (342)
470 2p4r_T E3 ubiquitin-protein li 20.6 55 0.0019 18.9 1.7 8 641-648 8-15 (26)
No 1
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=6.9e-53 Score=436.98 Aligned_cols=251 Identities=25% Similarity=0.380 Sum_probs=201.7
Q ss_pred hccccccCceeEEEEEec------CCcEEEEEEecccc-cCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEec
Q 036334 351 AEVLGKGSVGTSYKAVLE------EGTTVVVKRLKEVA-VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYM 423 (654)
Q Consensus 351 ~~~lg~G~fg~Vy~~~~~------~g~~vavK~~~~~~-~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 423 (654)
.+.||+|+||+||+|.+. +++.||||+++... ...++|.+|+++|++++|||||+++|+|.+++..+||||||
T Consensus 46 ~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~ 125 (329)
T 4aoj_A 46 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYM 125 (329)
T ss_dssp EEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred EEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence 467999999999999864 47889999997653 33567999999999999999999999999999999999999
Q ss_pred CCCchhhhhccCCCC----------CCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCC
Q 036334 424 PAGSLSALLHGSRGS----------GRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL 493 (654)
Q Consensus 424 ~~g~L~~~l~~~~~~----------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgl 493 (654)
++|+|.++++..... ...+++|.++++|+.|||+||+|||+++ |+||||||+|||+++++.+||+|||+
T Consensus 126 ~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~-iiHRDLKp~NILl~~~~~~Ki~DFGl 204 (329)
T 4aoj_A 126 RHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH-FVHRDLATRNCLVGQGLVVKIGDFGM 204 (329)
T ss_dssp TTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEETTTEEEECCCC-
T ss_pred CCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC-eecccccHhhEEECCCCcEEEccccc
Confidence 999999999764321 2356999999999999999999999988 99999999999999999999999999
Q ss_pred CCCcCCC------CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhch
Q 036334 494 NPLFGNT------TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEW 566 (654)
Q Consensus 494 a~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 566 (654)
|+..... ....+|+.|||||++.+..|+.++|||||||+||||+| |+.||..... ...+..+.....
T Consensus 205 a~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~------~~~~~~i~~g~~ 278 (329)
T 4aoj_A 205 SRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN------TEAIDCITQGRE 278 (329)
T ss_dssp ---------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCH------HHHHHHHHHTCC
T ss_pred ceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCH------HHHHHHHHcCCC
Confidence 9865332 23457788999999999999999999999999999999 8999975322 222222222110
Q ss_pred hhhhhhHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcC
Q 036334 567 TAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRG 619 (654)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 619 (654)
...+..+..++.+|+.+||+.||++||||+||+++|+.+.+.
T Consensus 279 -----------~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 279 -----------LERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp -----------CCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred -----------CCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 111122334677888899999999999999999999999765
No 2
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.8e-53 Score=435.40 Aligned_cols=253 Identities=24% Similarity=0.405 Sum_probs=205.0
Q ss_pred hhccccccCceeEEEEEec------CCcEEEEEEecccc-cCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEe
Q 036334 350 SAEVLGKGSVGTSYKAVLE------EGTTVVVKRLKEVA-VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDY 422 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~------~g~~vavK~~~~~~-~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 422 (654)
+.+.||+|+||+||+|.+. ++..||||+++... ...++|.+|+++|++++|||||+++|+|.+++..+|||||
T Consensus 17 l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey 96 (299)
T 4asz_A 17 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEY 96 (299)
T ss_dssp EEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred EeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEc
Confidence 3578999999999999864 47789999997653 3356799999999999999999999999999999999999
Q ss_pred cCCCchhhhhccCC--------CCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCC
Q 036334 423 MPAGSLSALLHGSR--------GSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLN 494 (654)
Q Consensus 423 ~~~g~L~~~l~~~~--------~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla 494 (654)
|++|+|.++|+... ......++|.++++++.|||+||+|||+++ |+||||||+|||+++++.+||+|||+|
T Consensus 97 ~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~-iiHRDlKp~NILl~~~~~~Ki~DFGla 175 (299)
T 4asz_A 97 MKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH-FVHRDLATRNCLVGENLLVKIGDFGMS 175 (299)
T ss_dssp CTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCSCH
T ss_pred CCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCccCHhhEEECCCCcEEECCcccc
Confidence 99999999997532 123456999999999999999999999998 999999999999999999999999999
Q ss_pred CCcCCC------CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhchh
Q 036334 495 PLFGNT------TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWT 567 (654)
Q Consensus 495 ~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 567 (654)
+..... ....+|+.|||||++.++.|+.++|||||||++|||+| |+.||..... .+.+..+.....
T Consensus 176 ~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~------~~~~~~i~~~~~- 248 (299)
T 4asz_A 176 RDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN------NEVIECITQGRV- 248 (299)
T ss_dssp HHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH------HHHHHHHHHTCC-
T ss_pred eecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH------HHHHHHHHcCCC-
Confidence 755332 22346788999999999999999999999999999999 8999975322 222222222111
Q ss_pred hhhhhHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCC
Q 036334 568 AEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGE 620 (654)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 620 (654)
...+..+..++.+|+.+||+.||++||||+||++.|+++.+..
T Consensus 249 ----------~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~~ 291 (299)
T 4asz_A 249 ----------LQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKAS 291 (299)
T ss_dssp ----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred ----------CCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcC
Confidence 1111223346778888999999999999999999999987653
No 3
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=7.2e-53 Score=432.79 Aligned_cols=249 Identities=22% Similarity=0.340 Sum_probs=203.5
Q ss_pred hccccccCceeEEEEEec------CCcEEEEEEecccc--cCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEe
Q 036334 351 AEVLGKGSVGTSYKAVLE------EGTTVVVKRLKEVA--VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDY 422 (654)
Q Consensus 351 ~~~lg~G~fg~Vy~~~~~------~g~~vavK~~~~~~--~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 422 (654)
.+.||+|+||+||+|.+. +++.||||+++... ...++|.+|+.++++++|||||+++|+|.+++..+|||||
T Consensus 31 ~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~Ey 110 (308)
T 4gt4_A 31 MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSY 110 (308)
T ss_dssp EEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred eeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEEEEc
Confidence 467999999999999863 46789999997653 3457899999999999999999999999999999999999
Q ss_pred cCCCchhhhhccCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEecc
Q 036334 423 MPAGSLSALLHGSRGS-----------GRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDF 491 (654)
Q Consensus 423 ~~~g~L~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Df 491 (654)
|++|+|.++|...... ....++|.++++|+.|||+||+|||+++ ||||||||+|||+++++.+||+||
T Consensus 111 ~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~-iiHRDLK~~NILl~~~~~~Ki~DF 189 (308)
T 4gt4_A 111 CSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH-VVHKDLATRNVLVYDKLNVKISDL 189 (308)
T ss_dssp CSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCS
T ss_pred CCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC-CCCCCccccceEECCCCCEEECCc
Confidence 9999999999643211 1246999999999999999999999998 999999999999999999999999
Q ss_pred CCCCCcCC------CCCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhh
Q 036334 492 GLNPLFGN------TTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVRE 564 (654)
Q Consensus 492 gla~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~ 564 (654)
|+|+.... .....+|+.|||||++.++.|+.++|||||||+||||+| |+.||..... .+.+..+ ..
T Consensus 190 Glar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~------~~~~~~i-~~ 262 (308)
T 4gt4_A 190 GLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN------QDVVEMI-RN 262 (308)
T ss_dssp CCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH------HHHHHHH-HT
T ss_pred ccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH------HHHHHHH-Hc
Confidence 99976532 223467788999999999999999999999999999999 8999975422 2222222 11
Q ss_pred chhhhhhhHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhh
Q 036334 565 EWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMN 617 (654)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 617 (654)
+.. ...+.++..++.+|+.+||+.||++||||+||++.|+.+.
T Consensus 263 ~~~----------~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~ 305 (308)
T 4gt4_A 263 RQV----------LPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG 305 (308)
T ss_dssp TCC----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred CCC----------CCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence 111 1112234456788899999999999999999999998753
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=6e-52 Score=424.18 Aligned_cols=250 Identities=28% Similarity=0.436 Sum_probs=198.8
Q ss_pred hhccccccCceeEEEEEecCCcEEEEEEecccccC---HHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCCC
Q 036334 350 SAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVG---KREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAG 426 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~---~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g 426 (654)
+.+.||+|+||+||+|.+. ..||||+++..... .++|.+|+++|++++|||||+++|+|.+ +..+||||||++|
T Consensus 40 l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy~~gG 116 (307)
T 3omv_A 40 LSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWCEGS 116 (307)
T ss_dssp EEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECCSSC
T ss_pred EeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEcCCCC
Confidence 3578999999999999876 36999999755332 4578999999999999999999998854 5689999999999
Q ss_pred chhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC------
Q 036334 427 SLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT------ 500 (654)
Q Consensus 427 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~------ 500 (654)
+|.++|+.. ...++|.++++|+.|||+||+|||+++ ||||||||+|||+++++.+||+|||+|+.....
T Consensus 117 sL~~~l~~~----~~~l~~~~~~~i~~qia~gL~yLH~~~-IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~ 191 (307)
T 3omv_A 117 SLYKHLHVQ----ETKFQMFQLIDIARQTAQGMDYLHAKN-IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQV 191 (307)
T ss_dssp BHHHHHHTS----CCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCSCCCSSSEEEETTEEEEECCCSSCBC----------
T ss_pred CHHHHHhhc----CCCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCccCHHHEEECCCCcEEEeeccCceecccCCcceee
Confidence 999999743 346999999999999999999999998 999999999999999999999999999865422
Q ss_pred CCCCccccccCccccCC---CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhc
Q 036334 501 TPPTRVAGYRAPEVVET---RKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMR 577 (654)
Q Consensus 501 ~~~~~~~~y~aPE~~~~---~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 577 (654)
....||+.|||||++.+ +.|+.++|||||||+||||+||+.||..... ...+...+...... +.+.
T Consensus 192 ~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~------~~~~~~~~~~~~~~----p~~~- 260 (307)
T 3omv_A 192 EQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINN------RDQIIFMVGRGYAS----PDLS- 260 (307)
T ss_dssp --CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC------HHHHHHHHHTTCCC----CCST-
T ss_pred cccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCCh------HHHHHHHHhcCCCC----CCcc-
Confidence 23568899999999853 4689999999999999999999999975322 12222222222111 1100
Q ss_pred cCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcC
Q 036334 578 YHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRG 619 (654)
Q Consensus 578 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 619 (654)
....++..++.+|+.+||+.||++||||.||++.|+.++..
T Consensus 261 -~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~ 301 (307)
T 3omv_A 261 -KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp -TSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred -cccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcc
Confidence 11122334677888899999999999999999999988754
No 5
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.9e-52 Score=430.45 Aligned_cols=258 Identities=22% Similarity=0.328 Sum_probs=199.6
Q ss_pred hccccccCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHhccCCCccccccEEEEeCC----ceEEEEEecCCC
Q 036334 351 AEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSKD----EKLLVYDYMPAG 426 (654)
Q Consensus 351 ~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~----~~~lv~e~~~~g 426 (654)
.+.||+|+||+||+|.+. |+.||||+++........++.|+..+.+++|||||+++++|.+++ .++||||||++|
T Consensus 8 ~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~g 86 (303)
T 3hmm_A 8 QESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHG 86 (303)
T ss_dssp EEEEEECSSSEEEEEEET-TEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTC
T ss_pred EEEEeeCCCeEEEEEEEC-CEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCCC
Confidence 578999999999999985 899999999765444444556777778899999999999998754 579999999999
Q ss_pred chhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcc--------CCeecCCCCCCcEEECCCCCeEEeccCCCCCcC
Q 036334 427 SLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS--------GKIVHGNIKASNILLRPDHDACVSDFGLNPLFG 498 (654)
Q Consensus 427 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~--------~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~ 498 (654)
+|.++++. ..++|..+++++.|+++||+|||++ + |+||||||+|||++.++.+||+|||+|+...
T Consensus 87 sL~~~l~~------~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~-IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~ 159 (303)
T 3hmm_A 87 SLFDYLNR------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLAVRHD 159 (303)
T ss_dssp BHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCC-EECSCCCGGGEEECTTSCEEECCCTTCEEEE
T ss_pred cHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC-EeeccCCcccEEECCCCCEEEEeCCCCcccc
Confidence 99999973 3589999999999999999999976 5 9999999999999999999999999987654
Q ss_pred CC--------CCCCccccccCccccCCC------CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCC--------hhH
Q 036334 499 NT--------TPPTRVAGYRAPEVVETR------KVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGID--------LPR 556 (654)
Q Consensus 499 ~~--------~~~~~~~~y~aPE~~~~~------~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~--------~~~ 556 (654)
.. ....+|+.|||||++.+. .++.++|||||||+||||+||..||......+... ...
T Consensus 160 ~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~ 239 (303)
T 3hmm_A 160 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVE 239 (303)
T ss_dssp TTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHH
T ss_pred CCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHH
Confidence 32 123578899999999754 46789999999999999999998876533221100 011
Q ss_pred HHHHHhhhchhhhhhhHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCC
Q 036334 557 WVQSVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGE 620 (654)
Q Consensus 557 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 620 (654)
.+...+. ....++.+.......+....+.+|+.+||+.||++||||.||++.|+++.+.+
T Consensus 240 ~~~~~~~----~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~~ 299 (303)
T 3hmm_A 240 EMRKVVC----EQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp HHHHHHT----TSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred HHHHHHh----cccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHHc
Confidence 1111111 11112222111223356677889999999999999999999999999998664
No 6
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=1.1e-52 Score=435.62 Aligned_cols=242 Identities=23% Similarity=0.373 Sum_probs=195.7
Q ss_pred HhhccccccCceeEEEEEec-CCcEEEEEEeccccc---CHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecC
Q 036334 349 ASAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAV---GKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMP 424 (654)
Q Consensus 349 ~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~ 424 (654)
.+.+.||+|+||+||+|... +|+.||||++..... ..+.+.+|+++|++++|||||++++++.+++..|||||||+
T Consensus 27 ~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy~~ 106 (350)
T 4b9d_A 27 VRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCE 106 (350)
T ss_dssp EEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred EEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeCCC
Confidence 34578999999999999964 689999999976533 24568899999999999999999999999999999999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC----
Q 036334 425 AGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT---- 500 (654)
Q Consensus 425 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~---- 500 (654)
+|+|.+++...+ ...+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|+.....
T Consensus 107 gg~L~~~i~~~~---~~~~~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~ 182 (350)
T 4b9d_A 107 GGDLFKRINAQK---GVLFQEDQILDWFVQICLALKHVHDRK-ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELA 182 (350)
T ss_dssp TCBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHHTT-CEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHHH
T ss_pred CCcHHHHHHHcC---CCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCCHHHEEECCCCCEEEcccccceeecCCcccc
Confidence 999999997442 345899999999999999999999998 999999999999999999999999999877543
Q ss_pred CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccCC
Q 036334 501 TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHN 580 (654)
Q Consensus 501 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 580 (654)
....||+.|||||++.+..|+.++|||||||++|||++|+.||... +....+..+....... ..
T Consensus 183 ~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~------~~~~~~~~i~~~~~~~--------~~-- 246 (350)
T 4b9d_A 183 RACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAG------SMKNLVLKIISGSFPP--------VS-- 246 (350)
T ss_dssp HHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS------SHHHHHHHHHHTCCCC--------CC--
T ss_pred cccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc------CHHHHHHHHHcCCCCC--------CC--
Confidence 2245889999999999999999999999999999999999999753 2233333333322110 01
Q ss_pred hHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 036334 581 IEEEMVQLLQIAMGCVSTVPDQRPAMQEVVR 611 (654)
Q Consensus 581 ~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 611 (654)
.....++.+|+.+||+.||++|||++|+++
T Consensus 247 -~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 247 -LHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp -TTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -ccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 112235667888999999999999999976
No 7
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=4.8e-51 Score=421.49 Aligned_cols=246 Identities=22% Similarity=0.234 Sum_probs=200.5
Q ss_pred hhccccccCceeEEEEEec-CCcEEEEEEecccccCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCCCch
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSL 428 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g~L 428 (654)
..++||+|+||+||+|... +|+.||||+++.... ..+|+.++++++|||||+++++|.+++..|||||||++|+|
T Consensus 62 ~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L 137 (336)
T 4g3f_A 62 HQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSL 137 (336)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCBH
T ss_pred eCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcH
Confidence 3467999999999999965 589999999976432 24689999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCC-CeEEeccCCCCCcCCC-------
Q 036334 429 SALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDH-DACVSDFGLNPLFGNT------- 500 (654)
Q Consensus 429 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~-~~kl~Dfgla~~~~~~------- 500 (654)
.++++. ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++ ++||+|||+|+.....
T Consensus 138 ~~~l~~-----~~~l~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~ 211 (336)
T 4g3f_A 138 GQLIKQ-----MGCLPEDRALYYLGQALEGLEYLHTRR-ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLL 211 (336)
T ss_dssp HHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHTTT-EECSCCCGGGEEECTTSCCEEECCCTTCEEC----------
T ss_pred HHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccccee
Confidence 999974 346999999999999999999999998 99999999999999987 6999999999876432
Q ss_pred --CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhcc
Q 036334 501 --TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRY 578 (654)
Q Consensus 501 --~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 578 (654)
....||+.|||||++.+..|+.++|||||||++|||++|+.||......+ +. ..+........ . ..
T Consensus 212 ~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~---~~---~~i~~~~~~~~----~--~~ 279 (336)
T 4g3f_A 212 TGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP---LC---LKIASEPPPIR----E--IP 279 (336)
T ss_dssp --CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSC---CH---HHHHHSCCGGG----G--SC
T ss_pred cCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH---HH---HHHHcCCCCch----h--cC
Confidence 12358899999999999999999999999999999999999997643322 11 12222111000 0 11
Q ss_pred CChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCC
Q 036334 579 HNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGE 620 (654)
Q Consensus 579 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 620 (654)
. .....+.+++.+||+.||++|||+.|+++.|....+..
T Consensus 280 ~---~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~ 318 (336)
T 4g3f_A 280 P---SCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEV 318 (336)
T ss_dssp T---TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred c---cCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhh
Confidence 1 12235667778999999999999999999998887543
No 8
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=2.3e-51 Score=425.04 Aligned_cols=240 Identities=22% Similarity=0.369 Sum_probs=198.5
Q ss_pred hccccccCceeEEEEEec-CCcEEEEEEeccc-ccCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCCCch
Q 036334 351 AEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEV-AVGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSL 428 (654)
Q Consensus 351 ~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~-~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g~L 428 (654)
.+.||+|+||+||+|... +|+.||||++... ....+.+.+|+++|++++|||||+++++|.+++..|||||||++|+|
T Consensus 79 ~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L 158 (346)
T 4fih_A 79 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 158 (346)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTTEEH
T ss_pred eEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcH
Confidence 467999999999999965 5899999999754 33456688999999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC----CCCC
Q 036334 429 SALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT----TPPT 504 (654)
Q Consensus 429 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~----~~~~ 504 (654)
.+++.. ..+++.++..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|...... ....
T Consensus 159 ~~~l~~------~~l~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~ 231 (346)
T 4fih_A 159 TDIVTH------TRMNEEQIAAVCLAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLV 231 (346)
T ss_dssp HHHHHH------SCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCC
T ss_pred HHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCCHHHEEECCCCCEEEecCcCceecCCCCCcccccc
Confidence 999973 34899999999999999999999998 999999999999999999999999999876433 3457
Q ss_pred ccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccCChHHH
Q 036334 505 RVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEE 584 (654)
Q Consensus 505 ~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 584 (654)
||+.|||||++.+..|+.++|||||||++|||++|+.||.... ....+..+. .... +.+ ......
T Consensus 232 GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~------~~~~~~~i~-~~~~-----~~~---~~~~~~ 296 (346)
T 4fih_A 232 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP------PLKAMKMIR-DNLP-----PRL---KNLHKV 296 (346)
T ss_dssp SCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC------HHHHHHHHH-HSSC-----CCC---SCGGGS
T ss_pred cCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC------HHHHHHHHH-cCCC-----CCC---CccccC
Confidence 8899999999999999999999999999999999999997532 112222221 1110 001 111122
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 036334 585 MVQLLQIAMGCVSTVPDQRPAMQEVVRM 612 (654)
Q Consensus 585 ~~~l~~l~~~cl~~dP~~RPs~~evl~~ 612 (654)
..++.+|+.+||+.||++|||++|+++.
T Consensus 297 s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 297 SPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 2356677889999999999999998763
No 9
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.3e-50 Score=423.22 Aligned_cols=255 Identities=26% Similarity=0.359 Sum_probs=205.0
Q ss_pred HhhccccccCceeEEEEEecC------CcEEEEEEeccccc--CHHHHHHHHHHHhccCC-CccccccEEEEeC-CceEE
Q 036334 349 ASAEVLGKGSVGTSYKAVLEE------GTTVVVKRLKEVAV--GKREFEMQMEVLGKIKH-DNVVPLRAFYYSK-DEKLL 418 (654)
Q Consensus 349 ~~~~~lg~G~fg~Vy~~~~~~------g~~vavK~~~~~~~--~~~~~~~e~~~l~~l~h-pniv~l~~~~~~~-~~~~l 418 (654)
.+.+.||+|+||+||+|.+.. ++.||||+++.... ..++|.+|+++|.+++| ||||+++|+|.+. +..++
T Consensus 67 ~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~i 146 (353)
T 4ase_A 67 KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 146 (353)
T ss_dssp EEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEE
T ss_pred EEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEE
Confidence 456789999999999998542 35799999976532 34678999999999975 8999999999765 56899
Q ss_pred EEEecCCCchhhhhccCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeE
Q 036334 419 VYDYMPAGSLSALLHGSRG-----------SGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDAC 487 (654)
Q Consensus 419 v~e~~~~g~L~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~k 487 (654)
|||||++|+|.++|+..+. .....+++..++.++.|||+||+|||+++ ||||||||+|||+++++.+|
T Consensus 147 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~-iiHRDLK~~NILl~~~~~vK 225 (353)
T 4ase_A 147 IVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSEKNVVK 225 (353)
T ss_dssp EEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEE
T ss_pred EEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC-eecCccCccceeeCCCCCEE
Confidence 9999999999999975431 11345899999999999999999999998 99999999999999999999
Q ss_pred EeccCCCCCcCCCC------CCCccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHH
Q 036334 488 VSDFGLNPLFGNTT------PPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQS 560 (654)
Q Consensus 488 l~Dfgla~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~pf~~~~~~~~~~~~~~~~~ 560 (654)
|+|||+|+...... ...+|+.|||||++.++.|+.++|||||||+||||+| |+.||...... ..+..
T Consensus 226 i~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~------~~~~~ 299 (353)
T 4ase_A 226 ICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID------EEFCR 299 (353)
T ss_dssp ECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS------HHHHH
T ss_pred ECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHH------HHHHH
Confidence 99999998764332 2345678999999999999999999999999999998 89999754321 22222
Q ss_pred HhhhchhhhhhhHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCC
Q 036334 561 VVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGE 620 (654)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 620 (654)
.+..+... ..+..+..++.+++.+||+.||++||||.||+++|+++.+..
T Consensus 300 ~i~~g~~~----------~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~~ 349 (353)
T 4ase_A 300 RLKEGTRM----------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 349 (353)
T ss_dssp HHHHTCCC----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred HHHcCCCC----------CCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHHh
Confidence 22222111 111223346778888999999999999999999999987654
No 10
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=2.3e-50 Score=409.43 Aligned_cols=239 Identities=24% Similarity=0.379 Sum_probs=191.0
Q ss_pred ccccccCceeEEEEEec-CCcEEEEEEeccccc---CHHHHHHHHHHHhccCCCccccccEEEEe----CCceEEEEEec
Q 036334 352 EVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAV---GKREFEMQMEVLGKIKHDNVVPLRAFYYS----KDEKLLVYDYM 423 (654)
Q Consensus 352 ~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~e~~~l~~l~hpniv~l~~~~~~----~~~~~lv~e~~ 423 (654)
+.||+|+||+||+|.+. ++..||+|++..... ..+.|.+|+++|++++|||||+++++|.+ ++..|||||||
T Consensus 32 ~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy~ 111 (290)
T 3fpq_A 32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELM 111 (290)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEECC
T ss_pred eEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeCC
Confidence 56999999999999965 588999999976533 24568999999999999999999999875 34579999999
Q ss_pred CCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccC-CeecCCCCCCcEEECC-CCCeEEeccCCCCCcCCC-
Q 036334 424 PAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSG-KIVHGNIKASNILLRP-DHDACVSDFGLNPLFGNT- 500 (654)
Q Consensus 424 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-~ivHrDlk~~NIll~~-~~~~kl~Dfgla~~~~~~- 500 (654)
++|+|.+++.. ...+++..+..++.||+.||+|||+++ +|+||||||+|||++. ++.+||+|||+|+.....
T Consensus 112 ~gg~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~~ 186 (290)
T 3fpq_A 112 TSGTLKTYLKR-----FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASF 186 (290)
T ss_dssp CSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTTS
T ss_pred CCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCCc
Confidence 99999999974 346999999999999999999999875 5999999999999984 789999999999865433
Q ss_pred -CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccC
Q 036334 501 -TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYH 579 (654)
Q Consensus 501 -~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 579 (654)
....||+.|||||++.+ .|+.++|||||||++|||+||+.||..... .......+ ........++ .
T Consensus 187 ~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~-----~~~~~~~i-~~~~~~~~~~------~ 253 (290)
T 3fpq_A 187 AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN-----AAQIYRRV-TSGVKPASFD------K 253 (290)
T ss_dssp BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS-----HHHHHHHH-TTTCCCGGGG------G
T ss_pred cCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCc-----HHHHHHHH-HcCCCCCCCC------c
Confidence 23568899999999865 699999999999999999999999964321 11222222 1111111111 1
Q ss_pred ChHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 036334 580 NIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVR 611 (654)
Q Consensus 580 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 611 (654)
.. ..++.+++.+||+.||++|||++|+++
T Consensus 254 ~~---~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 254 VA---IPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp CC---CHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cC---CHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 11 124667888999999999999999976
No 11
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=3.5e-50 Score=426.36 Aligned_cols=241 Identities=22% Similarity=0.371 Sum_probs=198.6
Q ss_pred hhccccccCceeEEEEEec-CCcEEEEEEecccc-cCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCCCc
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVA-VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGS 427 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g~ 427 (654)
..+.||+|+||+||+|... +|+.||||++.... ...+.+.+|+.+|++++|||||+++++|.+++.+|||||||++|+
T Consensus 155 ~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~gG~ 234 (423)
T 4fie_A 155 NFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 234 (423)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEE
T ss_pred eeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCCCc
Confidence 3467999999999999965 58999999997543 345668899999999999999999999999999999999999999
Q ss_pred hhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC----CCC
Q 036334 428 LSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT----TPP 503 (654)
Q Consensus 428 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~----~~~ 503 (654)
|.+++.. ..+++.++..++.||+.||+|||+++ |+||||||+|||++.+|.+||+|||+|..+... ...
T Consensus 235 L~~~i~~------~~l~e~~~~~~~~qil~aL~ylH~~~-IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~ 307 (423)
T 4fie_A 235 LTDIVTH------TRMNEEQIAAVCLAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSL 307 (423)
T ss_dssp HHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBCCC
T ss_pred HHHHHhc------cCCCHHHHHHHHHHHHHHHHHHHHCC-eecccCCHHHEEEcCCCCEEEecCccceECCCCCcccccc
Confidence 9999973 34899999999999999999999998 999999999999999999999999999876433 345
Q ss_pred CccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccCChHH
Q 036334 504 TRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEE 583 (654)
Q Consensus 504 ~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 583 (654)
.||+.|||||++.+..|+.++|||||||++|||++|+.||.... ....+..+. .... +.+......
T Consensus 308 ~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~------~~~~~~~i~-~~~~-----~~~~~~~~~-- 373 (423)
T 4fie_A 308 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP------PLKAMKMIR-DNLP-----PRLKNLHKV-- 373 (423)
T ss_dssp EECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC------HHHHHHHHH-HSCC-----CCCSCTTSS--
T ss_pred ccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC------HHHHHHHHH-cCCC-----CCCcccccC--
Confidence 68899999999999999999999999999999999999997532 112222221 1110 011111122
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 036334 584 EMVQLLQIAMGCVSTVPDQRPAMQEVVRM 612 (654)
Q Consensus 584 ~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 612 (654)
..++.+|+.+||..||++|||++|+++.
T Consensus 374 -s~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 374 -SPSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp -CHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -CHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 2355667779999999999999998763
No 12
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.9e-50 Score=412.13 Aligned_cols=239 Identities=19% Similarity=0.256 Sum_probs=199.3
Q ss_pred HhhccccccCceeEEEEEec-CCcEEEEEEeccc----ccCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEec
Q 036334 349 ASAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEV----AVGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYM 423 (654)
Q Consensus 349 ~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~----~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 423 (654)
.+.++||+|+||+||+|... +|+.||||++.+. ....+.+.+|+++|++++|||||+++++|.+++..|+||||+
T Consensus 35 ~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmEy~ 114 (311)
T 4aw0_A 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYA 114 (311)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred EEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecC
Confidence 34688999999999999964 6899999999754 234567899999999999999999999999999999999999
Q ss_pred CCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC---
Q 036334 424 PAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT--- 500 (654)
Q Consensus 424 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~--- 500 (654)
++|+|.+++.. ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|+.+...
T Consensus 115 ~gG~L~~~i~~-----~~~l~e~~~~~~~~qi~~al~ylH~~~-IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~ 188 (311)
T 4aw0_A 115 KNGELLKYIRK-----IGSFDETCTRFYTAEIVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 188 (311)
T ss_dssp TTEEHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTC
T ss_pred CCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCc
Confidence 99999999974 345999999999999999999999998 999999999999999999999999999876422
Q ss_pred ---CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhc
Q 036334 501 ---TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMR 577 (654)
Q Consensus 501 ---~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 577 (654)
....||+.|||||++.+..|+.++||||+||++|||++|+.||.... ....+..+...... .
T Consensus 189 ~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~------~~~~~~~i~~~~~~---------~ 253 (311)
T 4aw0_A 189 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN------EGLIFAKIIKLEYD---------F 253 (311)
T ss_dssp CCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHTCCC---------C
T ss_pred ccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHcCCCC---------C
Confidence 23468899999999999999999999999999999999999997532 22233333322210 1
Q ss_pred cCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 036334 578 YHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVR 611 (654)
Q Consensus 578 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 611 (654)
+.... .++.+|+.+||+.||++|||++|++.
T Consensus 254 p~~~s---~~~~dli~~lL~~dp~~R~t~~e~~~ 284 (311)
T 4aw0_A 254 PEKFF---PKARDLVEKLLVLDATKRLGCEEMEG 284 (311)
T ss_dssp CTTCC---HHHHHHHHHHSCSSGGGSTTSGGGTC
T ss_pred CcccC---HHHHHHHHHHccCCHhHCcChHHHcC
Confidence 11122 34566778999999999999998743
No 13
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.6e-49 Score=399.83 Aligned_cols=237 Identities=22% Similarity=0.337 Sum_probs=185.4
Q ss_pred hhccccccCceeEEEEEec-CCcEEEEEEecccc----cCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecC
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVA----VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMP 424 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~ 424 (654)
+.+.||+|+||+||+|... +|+.||||++.+.. .....+.+|++++++++|||||++++++.+++..|+||||+
T Consensus 17 i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~- 95 (275)
T 3hyh_A 17 IVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA- 95 (275)
T ss_dssp EEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC-
T ss_pred EEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEeCC-
Confidence 4578999999999999954 68999999997542 23457899999999999999999999999999999999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC---C
Q 036334 425 AGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT---T 501 (654)
Q Consensus 425 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~---~ 501 (654)
+|+|.+++.. ...+++.++..++.||+.||+|||+++ |+||||||+|||++.++++||+|||+|+..... .
T Consensus 96 ~g~L~~~l~~-----~~~l~e~~~~~~~~qi~~al~ylH~~~-IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~ 169 (275)
T 3hyh_A 96 GNELFDYIVQ-----RDKMSEQEARRFFQQIISAVEYCHRHK-IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLK 169 (275)
T ss_dssp CEEHHHHHHH-----SCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCTTTEEECTTCCEEECCSSCC----------
T ss_pred CCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCChHHeEECCCCCEEEeecCCCeecCCCCccC
Confidence 6899999873 346999999999999999999999998 999999999999999999999999999876543 3
Q ss_pred CCCccccccCccccCCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccCC
Q 036334 502 PPTRVAGYRAPEVVETRKV-TFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHN 580 (654)
Q Consensus 502 ~~~~~~~y~aPE~~~~~~~-~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 580 (654)
...||+.|||||++.+..| +.++||||+||++|||++|+.||... +....+..+...... .+..
T Consensus 170 ~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~------~~~~~~~~i~~~~~~---------~p~~ 234 (275)
T 3hyh_A 170 TSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE------SIPVLFKNISNGVYT---------LPKF 234 (275)
T ss_dssp -----CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHTCCC---------CCTT
T ss_pred CeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCC------CHHHHHHHHHcCCCC---------CCCC
Confidence 4578899999999988876 58999999999999999999999753 222233333222110 0111
Q ss_pred hHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 036334 581 IEEEMVQLLQIAMGCVSTVPDQRPAMQEVVR 611 (654)
Q Consensus 581 ~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 611 (654)
.. .++.+++.+||+.||++|||++|+++
T Consensus 235 ~s---~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 235 LS---PGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp SC---HHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred CC---HHHHHHHHHHccCChhHCcCHHHHHc
Confidence 22 34567788999999999999999987
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=9.9e-50 Score=406.76 Aligned_cols=234 Identities=24% Similarity=0.321 Sum_probs=187.2
Q ss_pred HhhccccccCceeEEEEEec----CCcEEEEEEecccc---cCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEE
Q 036334 349 ASAEVLGKGSVGTSYKAVLE----EGTTVVVKRLKEVA---VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYD 421 (654)
Q Consensus 349 ~~~~~lg~G~fg~Vy~~~~~----~g~~vavK~~~~~~---~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 421 (654)
.+.+.||+|+||+||+|+.. .++.||||++++.. ....++.+|+++|++++|||||++++++.+++..|+|||
T Consensus 27 ~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmE 106 (304)
T 3ubd_A 27 ELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILD 106 (304)
T ss_dssp EEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEEEC
T ss_pred EEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEE
Confidence 45688999999999999852 36799999997542 234468889999999999999999999999999999999
Q ss_pred ecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCC--
Q 036334 422 YMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN-- 499 (654)
Q Consensus 422 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~-- 499 (654)
||++|+|.+++.. ...+++.++..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|+....
T Consensus 107 y~~gg~L~~~l~~-----~~~l~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 180 (304)
T 3ubd_A 107 FLRGGDLFTRLSK-----EVMFTEEDVKFYLAELALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE 180 (304)
T ss_dssp CCTTCEEHHHHHH-----HCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCCGGGEEECTTSCEEEESSEEEEC-----
T ss_pred cCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-CcCCCCCHHHeEEcCCCCEEecccccceeccCCC
Confidence 9999999999974 346999999999999999999999998 99999999999999999999999999986532
Q ss_pred --CCCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhc
Q 036334 500 --TTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMR 577 (654)
Q Consensus 500 --~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 577 (654)
.....||+.|||||++.+..|+.++||||+||++|||++|+.||.... ....+..+...... .
T Consensus 181 ~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~------~~~~~~~i~~~~~~---------~ 245 (304)
T 3ubd_A 181 KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKD------RKETMTMILKAKLG---------M 245 (304)
T ss_dssp CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHCCCC---------C
T ss_pred ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcC------HHHHHHHHHcCCCC---------C
Confidence 234568899999999999999999999999999999999999997532 22223333222110 1
Q ss_pred cCChHHHHHHHHHHHhhccCCCCCCCCCH
Q 036334 578 YHNIEEEMVQLLQIAMGCVSTVPDQRPAM 606 (654)
Q Consensus 578 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~ 606 (654)
+.... .++.+++.+||+.||++|||+
T Consensus 246 p~~~s---~~~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 246 PQFLS---PEAQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp CTTSC---HHHHHHHHHHTCSSGGGSTTC
T ss_pred CCcCC---HHHHHHHHHHcccCHHHCCCC
Confidence 11122 346677789999999999984
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=7.4e-48 Score=394.44 Aligned_cols=241 Identities=21% Similarity=0.348 Sum_probs=182.9
Q ss_pred HhhccccccCceeEEEEEec-CCcEEEEEEecccc--cCHHHHHHHHHHHhccCCCccccccEEEEeCC-----------
Q 036334 349 ASAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVA--VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKD----------- 414 (654)
Q Consensus 349 ~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~----------- 414 (654)
.+.+.||+|+||+||+|... +|+.||||+++... ...+.+.+|+++|++++|||||+++++|.+.+
T Consensus 8 ~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~ 87 (299)
T 4g31_A 8 EPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPK 87 (299)
T ss_dssp EEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------C
T ss_pred EEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCCC
Confidence 34578999999999999964 68999999987543 23467889999999999999999999987644
Q ss_pred -ceEEEEEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCC
Q 036334 415 -EKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL 493 (654)
Q Consensus 415 -~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgl 493 (654)
..|+|||||++|+|.+++.... .....++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+
T Consensus 88 ~~l~ivmE~~~gg~L~~~l~~~~--~~~~~~~~~~~~i~~qi~~al~ylH~~~-IiHRDlKp~NILl~~~~~vKl~DFGl 164 (299)
T 4g31_A 88 VYLYIQMQLCRKENLKDWMNGRC--TIEERERSVCLHIFLQIAEAVEFLHSKG-LMHRDLKPSNIFFTMDDVVKVGDFGL 164 (299)
T ss_dssp EEEEEEEECCCSCCHHHHHHTCC--SGGGSCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCCCC
T ss_pred cEEEEEEecCCCCcHHHHHHhcC--CCChhHHHHHHHHHHHHHHHHHHHHHCc-CccccCcHHHeEECCCCcEEEccCcc
Confidence 3689999999999999997432 1234677889999999999999999998 99999999999999999999999999
Q ss_pred CCCcCCC----------------CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHH
Q 036334 494 NPLFGNT----------------TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRW 557 (654)
Q Consensus 494 a~~~~~~----------------~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~ 557 (654)
|+..... ....||+.|||||++.+..|+.++|||||||++|||++ ||.... +....
T Consensus 165 a~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~-----~~~~~ 236 (299)
T 4g31_A 165 VTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM-----ERVRT 236 (299)
T ss_dssp C--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH-----HHHHH
T ss_pred ceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc-----HHHHH
Confidence 9876432 12358889999999999999999999999999999996 765311 00111
Q ss_pred HHHHhhhchhhhhhhHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 036334 558 VQSVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVR 611 (654)
Q Consensus 558 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 611 (654)
+... ..... . .........+.+++.+||+.||++|||+.|+++
T Consensus 237 ~~~~-~~~~~----p------~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 237 LTDV-RNLKF----P------PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HHHH-HTTCC----C------HHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHH-hcCCC----C------CCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1111 11000 0 011222334567888999999999999999986
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.2e-45 Score=388.20 Aligned_cols=251 Identities=22% Similarity=0.302 Sum_probs=191.5
Q ss_pred HhhccccccCceeEEEEEec-CCcEEEEEEecccccC---HHHHHHHHHHHhccCCCccccccEEEEeC------CceEE
Q 036334 349 ASAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAVG---KREFEMQMEVLGKIKHDNVVPLRAFYYSK------DEKLL 418 (654)
Q Consensus 349 ~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~e~~~l~~l~hpniv~l~~~~~~~------~~~~l 418 (654)
.+.+.||+|+||+||+|... +|+.||||+++..... .+.+.+|+++|++++|||||++++++... +..||
T Consensus 57 ~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~i 136 (398)
T 4b99_A 57 EIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYV 136 (398)
T ss_dssp EEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEEE
T ss_pred EEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEEE
Confidence 34578999999999999964 6999999999765332 35678899999999999999999987643 56899
Q ss_pred EEEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcC
Q 036334 419 VYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFG 498 (654)
Q Consensus 419 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~ 498 (654)
|||||+ |+|.+++.. ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|+.+.
T Consensus 137 vmE~~~-g~L~~~i~~-----~~~l~~~~~~~~~~qil~al~ylH~~~-iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~ 209 (398)
T 4b99_A 137 VLDLME-SDLHQIIHS-----SQPLTLEHVRYFLYQLLRGLKYMHSAQ-VIHRDLKPSNLLVNENCELKIGDFGMARGLC 209 (398)
T ss_dssp EEECCS-EEHHHHHTS-----SSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTCCEEECCCTTCBCC-
T ss_pred EEeCCC-CCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCc-CcCCCcCccccccCCCCCEEEeecceeeecc
Confidence 999995 689999973 356999999999999999999999998 9999999999999999999999999998653
Q ss_pred CC--------CCCCccccccCccccCCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchh--
Q 036334 499 NT--------TPPTRVAGYRAPEVVETR-KVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWT-- 567 (654)
Q Consensus 499 ~~--------~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~-- 567 (654)
.. ....||+.|||||++.+. .|+.++||||+||++|||++|+.||.+.... ..+..+......
T Consensus 210 ~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~------~~l~~I~~~~g~p~ 283 (398)
T 4b99_A 210 TSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYV------HQLQLIMMVLGTPS 283 (398)
T ss_dssp ------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHH------HHHHHHHHHHCCCC
T ss_pred cCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHH------HHHHHHHHhcCCCC
Confidence 21 235688899999998764 5799999999999999999999999764321 112211110000
Q ss_pred hhh--------hhH---hhhc--cCChH----HHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 036334 568 AEV--------FDV---ELMR--YHNIE----EEMVQLLQIAMGCVSTVPDQRPAMQEVVRM 612 (654)
Q Consensus 568 ~~~--------~~~---~~~~--~~~~~----~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 612 (654)
... ... .+.. ..... ....++.+|+.+||..||++|||++|+++.
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 284 PAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp GGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred hHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 000 000 0000 00000 012346678889999999999999998763
No 17
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=1.7e-44 Score=379.50 Aligned_cols=188 Identities=26% Similarity=0.437 Sum_probs=163.6
Q ss_pred HhhccccccCceeEEEEEec----CCcEEEEEEecccccCHHHHHHHHHHHhcc-CCCccccccEEEEeCCceEEEEEec
Q 036334 349 ASAEVLGKGSVGTSYKAVLE----EGTTVVVKRLKEVAVGKREFEMQMEVLGKI-KHDNVVPLRAFYYSKDEKLLVYDYM 423 (654)
Q Consensus 349 ~~~~~lg~G~fg~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e~~ 423 (654)
.+.+.||+|+||+||+|..+ .++.||+|++.... ...++.+|+++|+++ +|||||+++++|.++++.|+||||+
T Consensus 24 ~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE~~ 102 (361)
T 4f9c_A 24 KIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS-HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYL 102 (361)
T ss_dssp EEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS-CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEECC
T ss_pred EEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc-CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEeCC
Confidence 34578999999999999853 46789999986543 345678999999988 6999999999999999999999999
Q ss_pred CCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCC-CCeEEeccCCCCCcCCC--
Q 036334 424 PAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPD-HDACVSDFGLNPLFGNT-- 500 (654)
Q Consensus 424 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~-~~~kl~Dfgla~~~~~~-- 500 (654)
++|+|.+++. .+++.++..++.|++.||+|||+++ |+||||||+|||++.+ +.+||+|||+|+.....
T Consensus 103 ~g~~L~~~~~--------~l~~~~~~~~~~qll~al~ylH~~g-IiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~ 173 (361)
T 4f9c_A 103 EHESFLDILN--------SLSFQEVREYMLNLFKALKRIHQFG-IVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKI 173 (361)
T ss_dssp CCCCHHHHHT--------TCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSC
T ss_pred CcccHHHHHc--------CCCHHHHHHHHHHHHHHHHHHHHCC-eEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCccc
Confidence 9999999984 2899999999999999999999998 9999999999999877 79999999999754321
Q ss_pred ------------------------------CCCCccccccCccccCCC-CCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 036334 501 ------------------------------TPPTRVAGYRAPEVVETR-KVTFKSDVYSFGVLLLELLTGKAPNQAS 546 (654)
Q Consensus 501 ------------------------------~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvil~el~tg~~pf~~~ 546 (654)
....||+.|||||++.+. .|+.++||||+||++|||++|+.||...
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~ 250 (361)
T 4f9c_A 174 ELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKA 250 (361)
T ss_dssp GGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCC
T ss_pred cccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCC
Confidence 123588899999999775 5899999999999999999999999653
No 18
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=9.2e-44 Score=370.14 Aligned_cols=266 Identities=32% Similarity=0.519 Sum_probs=222.9
Q ss_pred hccccccCceeEEEEEecCCcEEEEEEecccc-cCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCCCchh
Q 036334 351 AEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVA-VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLS 429 (654)
Q Consensus 351 ~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~-~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g~L~ 429 (654)
.+.||+|+||.||+|...+|+.||||++.... ...+.+.+|++++++++||||+++++++.+.+..++||||+++|+|.
T Consensus 44 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 123 (321)
T 2qkw_B 44 KFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLK 123 (321)
T ss_dssp CCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCTTCBTG
T ss_pred cceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCCCcHH
Confidence 46799999999999998889999999987653 33567899999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC------CCC
Q 036334 430 ALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT------TPP 503 (654)
Q Consensus 430 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~------~~~ 503 (654)
+++..... ....+++..+++++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++...... ...
T Consensus 124 ~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~ 201 (321)
T 2qkw_B 124 RHLYGSDL-PTMSMSWEQRLEICIGAARGLHYLHTRA-IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTVV 201 (321)
T ss_dssp GGSSSSCC-CSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCCBCCC
T ss_pred HHHhccCC-CccccCHHHHHHHHHHHHHHHHHhcCCC-eecCCCCHHHEEECCCCCEEEeeccccccccccccccccccc
Confidence 99975432 2346999999999999999999999998 999999999999999999999999998754322 223
Q ss_pred CccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccCChHH
Q 036334 504 TRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEE 583 (654)
Q Consensus 504 ~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 583 (654)
.++..|+|||++.+..++.++|||||||++|||++|+.||......+......|.............++... ......+
T Consensus 202 ~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 280 (321)
T 2qkw_B 202 KGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNL-ADKIRPE 280 (321)
T ss_dssp EEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSC-TTCSCHH
T ss_pred CCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhh-ccccCHH
Confidence 467789999999888999999999999999999999999988776666666666555444433333333332 1223466
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcC
Q 036334 584 EMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRG 619 (654)
Q Consensus 584 ~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 619 (654)
....+.+++.+||+.||++|||+.|+++.|+.+.+.
T Consensus 281 ~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~ 316 (321)
T 2qkw_B 281 SLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316 (321)
T ss_dssp HHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence 778899999999999999999999999999998754
No 19
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=5.3e-44 Score=395.52 Aligned_cols=241 Identities=21% Similarity=0.289 Sum_probs=191.6
Q ss_pred hhccccccCceeEEEEEec-CCcEEEEEEecccc----cCHHHHH---HHHHHHhccCCCccccccEEEEeCCceEEEEE
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVA----VGKREFE---MQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYD 421 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~---~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 421 (654)
+.++||+|+||+||+|... +|+.||||++++.. .....+. .++.+++.++|||||+++++|.+++.+|+|||
T Consensus 193 i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylVmE 272 (689)
T 3v5w_A 193 VHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILD 272 (689)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEEC
T ss_pred EEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEEEe
Confidence 3578999999999999965 58999999997542 1222233 34567778899999999999999999999999
Q ss_pred ecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC-
Q 036334 422 YMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT- 500 (654)
Q Consensus 422 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~- 500 (654)
|++||+|.++|.. ...+++..+..++.||+.||+|||+++ ||||||||+|||++.+|++||+|||+|......
T Consensus 273 y~~GGdL~~~l~~-----~~~l~E~~a~~y~~qIl~aL~yLH~~g-IiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~~ 346 (689)
T 3v5w_A 273 LMNGGDLHYHLSQ-----HGVFSEADMRFYAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK 346 (689)
T ss_dssp CCCSCBHHHHHHH-----HCCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCSGGGEEECTTSCEEECCCTTCEECSSCC
T ss_pred cCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCchHHeEEeCCCCEEecccceeeecCCCC
Confidence 9999999999974 345999999999999999999999998 999999999999999999999999999876543
Q ss_pred -CCCCccccccCccccCC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhcc
Q 036334 501 -TPPTRVAGYRAPEVVET-RKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRY 578 (654)
Q Consensus 501 -~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 578 (654)
....||+.|||||++.. ..|+.++||||+||++|||++|+.||......+ .......+.... ...+
T Consensus 347 ~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~---~~~i~~~i~~~~---------~~~p 414 (689)
T 3v5w_A 347 PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD---KHEIDRMTLTMA---------VELP 414 (689)
T ss_dssp CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCC---HHHHHHHHHHCC---------CCCC
T ss_pred CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH---HHHHHHhhcCCC---------CCCC
Confidence 34678999999999964 579999999999999999999999997543222 211111111111 0011
Q ss_pred CChHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 036334 579 HNIEEEMVQLLQIAMGCVSTVPDQRPA-----MQEVVR 611 (654)
Q Consensus 579 ~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~evl~ 611 (654)
.... .++.+|+.+||+.||++|++ ++||.+
T Consensus 415 ~~~S---~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 415 DSFS---PELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp TTSC---HHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred ccCC---HHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 1222 34566777999999999998 677754
No 20
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=1.3e-43 Score=369.29 Aligned_cols=262 Identities=27% Similarity=0.355 Sum_probs=204.2
Q ss_pred hhccccccCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHhccCCCccccccEEEEeCCc----eEEEEEecCC
Q 036334 350 SAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDE----KLLVYDYMPA 425 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~----~~lv~e~~~~ 425 (654)
+.++||+|+||+||+|... ++.||||+++........+++|+.++++++||||+++++++.+... .++||||+++
T Consensus 28 ~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~ 106 (322)
T 3soc_A 28 LLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEK 106 (322)
T ss_dssp EEEEEECSTTCEEEEEEET-TEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred hhheecccCceEEEEEEEC-CCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecCCC
Confidence 3578999999999999876 7999999998766556667789999999999999999999987543 6999999999
Q ss_pred CchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcc----------CCeecCCCCCCcEEECCCCCeEEeccCCCC
Q 036334 426 GSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS----------GKIVHGNIKASNILLRPDHDACVSDFGLNP 495 (654)
Q Consensus 426 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~----------~~ivHrDlk~~NIll~~~~~~kl~Dfgla~ 495 (654)
|+|.+++.. ..+++..++.++.|++.||+|||+. + |+||||||+|||++.++.+||+|||++.
T Consensus 107 g~L~~~l~~------~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~-ivH~Dlkp~Nill~~~~~~kL~DFg~a~ 179 (322)
T 3soc_A 107 GSLSDFLKA------NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA-ISHRDIKSKNVLLKNNLTACIADFGLAL 179 (322)
T ss_dssp CBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECE-EECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred CCHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCC-EEeCCCChHhEEECCCCeEEEccCCccc
Confidence 999999973 3489999999999999999999988 7 9999999999999999999999999997
Q ss_pred CcCCC------CCCCccccccCccccCC-----CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHH---
Q 036334 496 LFGNT------TPPTRVAGYRAPEVVET-----RKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSV--- 561 (654)
Q Consensus 496 ~~~~~------~~~~~~~~y~aPE~~~~-----~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~--- 561 (654)
..... ....++..|+|||++.+ ..++.++|||||||++|||++|+.||..................
T Consensus 180 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 259 (322)
T 3soc_A 180 KFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSL 259 (322)
T ss_dssp EECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCH
T ss_pred ccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCch
Confidence 65432 22456788999999976 35667899999999999999999999875543322221110000
Q ss_pred --hhhchhhhhhhHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcC
Q 036334 562 --VREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRG 619 (654)
Q Consensus 562 --~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 619 (654)
...........+.+...........++.+++.+||+.||++|||++|+++.|+++.+.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 260 EDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp HHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 0000000000011111111234456688999999999999999999999999999754
No 21
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=6.9e-44 Score=397.21 Aligned_cols=244 Identities=22% Similarity=0.386 Sum_probs=199.6
Q ss_pred HhhccccccCceeEEEEEec-CCcEEEEEEecccc-cCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCCC
Q 036334 349 ASAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVA-VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAG 426 (654)
Q Consensus 349 ~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g 426 (654)
.+.+.||+|+||+||+|..+ +|+.||+|++.... ...+.+.+|+++|+.++|||||+++++|.+++..|+|||||++|
T Consensus 160 ~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~gg 239 (573)
T 3uto_A 160 DIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGG 239 (573)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCCCC
T ss_pred EEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecCCC
Confidence 34678999999999999965 58999999987653 34567889999999999999999999999999999999999999
Q ss_pred chhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCC--CCeEEeccCCCCCcCCCC---
Q 036334 427 SLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPD--HDACVSDFGLNPLFGNTT--- 501 (654)
Q Consensus 427 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~--~~~kl~Dfgla~~~~~~~--- 501 (654)
+|.+++... ...+++.++..++.||+.||+|||+++ |+||||||+|||++.+ +.+||+|||+|..+....
T Consensus 240 ~L~~~i~~~----~~~l~e~~~~~~~~qi~~al~ylH~~~-iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~~ 314 (573)
T 3uto_A 240 ELFEKVADE----HNKMSEDEAVEYMRQVCKGLCHMHENN-YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK 314 (573)
T ss_dssp BHHHHHTCT----TSCEEHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEEE
T ss_pred cHHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCChhhccccCCCCCCEEEeeccceeEccCCCcee
Confidence 999999643 345999999999999999999999998 9999999999999864 899999999998876543
Q ss_pred CCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccCCh
Q 036334 502 PPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNI 581 (654)
Q Consensus 502 ~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 581 (654)
...||+.|||||++.+..|+.++||||+||++|||++|+.||.+... ...+..+....+.. .. ..+...
T Consensus 315 ~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~------~~~~~~i~~~~~~~---~~--~~~~~~ 383 (573)
T 3uto_A 315 VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND------DETLRNVKSCDWNM---DD--SAFSGI 383 (573)
T ss_dssp EECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH------HHHHHHHHTTCCCC---CS--GGGTTS
T ss_pred eeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH------HHHHHHHHhCCCCC---Cc--ccccCC
Confidence 34678889999999999999999999999999999999999975322 22223332222110 00 011122
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 036334 582 EEEMVQLLQIAMGCVSTVPDQRPAMQEVVR 611 (654)
Q Consensus 582 ~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 611 (654)
. .++.+|+.+||+.||++|||+.|+++
T Consensus 384 s---~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 384 S---EDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp C---HHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred C---HHHHHHHHHHccCChhHCcCHHHHhc
Confidence 2 24556777999999999999999986
No 22
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=3.6e-43 Score=366.42 Aligned_cols=266 Identities=40% Similarity=0.668 Sum_probs=218.7
Q ss_pred hccccccCceeEEEEEecCCcEEEEEEecccc--cCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCCCch
Q 036334 351 AEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVA--VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSL 428 (654)
Q Consensus 351 ~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~--~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g~L 428 (654)
.+.||+|+||.||+|...+|+.||||+++... .....+.+|++++++++||||+++++++.+.+..++||||+++|+|
T Consensus 35 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 114 (326)
T 3uim_A 35 KNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSV 114 (326)
T ss_dssp TTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCEEEEECCTTCBH
T ss_pred ceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecCCceEEEEEeccCCCH
Confidence 57899999999999998889999999997653 2334789999999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcc---CCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC-----
Q 036334 429 SALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS---GKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT----- 500 (654)
Q Consensus 429 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~---~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~----- 500 (654)
.+++..... ....+++..++.++.|++.||+|||++ + |+||||||+|||++.++.+||+|||++......
T Consensus 115 ~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~-ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 192 (326)
T 3uim_A 115 ASCLRERPE-SQPPLDWPKRQRIALGSARGLAYLHDHCDPK-IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVT 192 (326)
T ss_dssp HHHHHCCST-TCCCCCHHHHHHHHHHHHHHHHHHHHSSSSC-EECCCCSGGGEEECTTCCEEECCCSSCEECCSSSSCEE
T ss_pred HHHHHhccc-cCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC-eEeCCCchhhEEECCCCCEEeccCccccccCccccccc
Confidence 999985432 345699999999999999999999998 7 999999999999999999999999999765432
Q ss_pred CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC--CCCCCChhHHHHHHhhhchhhhhhhHhhhcc
Q 036334 501 TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASL--GEEGIDLPRWVQSVVREEWTAEVFDVELMRY 578 (654)
Q Consensus 501 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 578 (654)
....++..|+|||++.+..++.++|||||||++|||++|+.||.... .........|+.............+... ..
T Consensus 193 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 271 (326)
T 3uim_A 193 TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDL-QG 271 (326)
T ss_dssp CCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTC-TT
T ss_pred ccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcChhh-cc
Confidence 22347888999999988889999999999999999999999996322 2233345555554444444444444333 23
Q ss_pred CChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcC
Q 036334 579 HNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRG 619 (654)
Q Consensus 579 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 619 (654)
....+....+.+++.+||+.||++|||+.||+++|++..-.
T Consensus 272 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~~ 312 (326)
T 3uim_A 272 NYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLA 312 (326)
T ss_dssp SCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSCS
T ss_pred ccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcchh
Confidence 34567788899999999999999999999999999975433
No 23
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=3.5e-42 Score=356.30 Aligned_cols=249 Identities=24% Similarity=0.421 Sum_probs=203.7
Q ss_pred hccccccCceeEEEEEec-CCcEEEEEEeccc-ccCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCCCch
Q 036334 351 AEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEV-AVGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSL 428 (654)
Q Consensus 351 ~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~-~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g~L 428 (654)
.++||+|+||+||+|... +++.||+|++... ....+.+.+|++++++++||||+++++++.+++..++||||+++|+|
T Consensus 15 ~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L 94 (310)
T 3s95_A 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTL 94 (310)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCTTCBH
T ss_pred cceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecCCCcH
Confidence 578999999999999965 5899999988654 33456789999999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCCC-------
Q 036334 429 SALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTT------- 501 (654)
Q Consensus 429 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~------- 501 (654)
.+++... ...+++.+++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++.......
T Consensus 95 ~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 169 (310)
T 3s95_A 95 RGIIKSM----DSQYPWSQRVSFAKDIASGMAYLHSMN-IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLR 169 (310)
T ss_dssp HHHHHHC----CTTSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSTTSEEECTTSCEEECCCTTCEECC----------
T ss_pred HHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCCcCeEEECCCCCEEEeecccceecccccccccccc
Confidence 9999753 345899999999999999999999998 9999999999999999999999999997654321
Q ss_pred -----------CCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhh
Q 036334 502 -----------PPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEV 570 (654)
Q Consensus 502 -----------~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 570 (654)
...+++.|+|||++.+..++.++|||||||++|||++|..||........... .........
T Consensus 170 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~-~~~~~~~~~------ 242 (310)
T 3s95_A 170 SLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFG-LNVRGFLDR------ 242 (310)
T ss_dssp ----------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSS-BCHHHHHHH------
T ss_pred cccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHh-hhhhccccc------
Confidence 33577889999999999999999999999999999999999876443321110 000110000
Q ss_pred hhHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcC
Q 036334 571 FDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRG 619 (654)
Q Consensus 571 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 619 (654)
. ........+.+++.+||+.||++|||++|+++.|+++...
T Consensus 243 ---~-----~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~ 283 (310)
T 3s95_A 243 ---Y-----CPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMH 283 (310)
T ss_dssp ---T-----CCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---c-----CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 0 0111123577788899999999999999999999998754
No 24
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.6e-42 Score=351.20 Aligned_cols=249 Identities=25% Similarity=0.414 Sum_probs=208.1
Q ss_pred HhhccccccCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCCCch
Q 036334 349 ASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSL 428 (654)
Q Consensus 349 ~~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g~L 428 (654)
...+.||+|+||.||+|...+++.||+|++.......+++.+|++++++++||||+++++++.+++..++||||+++|+|
T Consensus 13 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 92 (269)
T 4hcu_A 13 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCL 92 (269)
T ss_dssp EEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTCBH
T ss_pred eeeheecCCCccEEEEEEecCCCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCCCcH
Confidence 34578999999999999988899999999988777788899999999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC-----CCC
Q 036334 429 SALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT-----TPP 503 (654)
Q Consensus 429 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~-----~~~ 503 (654)
.+++... ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++...... ...
T Consensus 93 ~~~l~~~----~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 167 (269)
T 4hcu_A 93 SDYLRTQ----RGLFAAETLLGMCLDVCEGMAYLEEAC-VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGT 167 (269)
T ss_dssp HHHHHTT----TTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTST
T ss_pred HHHHHhc----CcccCHHHHHHHHHHHHHHHHHHHhCC-eecCCcchheEEEcCCCCEEeccccccccccccccccccCc
Confidence 9999743 345899999999999999999999998 999999999999999999999999999765432 233
Q ss_pred CccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccCChH
Q 036334 504 TRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIE 582 (654)
Q Consensus 504 ~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 582 (654)
.++..|+|||++.+..++.++||||+|+++|||++ |+.||..... ......+... . ......
T Consensus 168 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~------~~~~~~~~~~-~----------~~~~~~ 230 (269)
T 4hcu_A 168 KFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN------SEVVEDISTG-F----------RLYKPR 230 (269)
T ss_dssp TCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH------HHHHHHHHTT-C----------CCCCCT
T ss_pred ccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCH------HHHHHHHhcC-c----------cCCCCC
Confidence 45567999999998899999999999999999999 9999875321 1112221111 0 000111
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcC
Q 036334 583 EEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRG 619 (654)
Q Consensus 583 ~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 619 (654)
.....+.+++.+||+.||++|||++|+++.|+++.+.
T Consensus 231 ~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 231 LASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 1233577788899999999999999999999999865
No 25
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=2e-42 Score=357.94 Aligned_cols=253 Identities=31% Similarity=0.424 Sum_probs=196.8
Q ss_pred HhhccccccCceeEEEEEecCCcEEEEEEecccccC---HHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCC
Q 036334 349 ASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVG---KREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPA 425 (654)
Q Consensus 349 ~~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~---~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~ 425 (654)
.+.+.||+|+||+||+|... |+.||||++...... .+++.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 40 ~i~~~lG~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 118 (309)
T 3p86_A 40 NIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSR 118 (309)
T ss_dssp EEEEEEEECSSEEEEEEEET-TEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEECCTT
T ss_pred eeeeEeecCCCeEEEEEEEC-CCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEecCCC
Confidence 34578999999999999874 889999999765433 34688999999999999999999999999999999999999
Q ss_pred CchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccC-CeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC----
Q 036334 426 GSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSG-KIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT---- 500 (654)
Q Consensus 426 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~---- 500 (654)
|+|.+++.... ....+++..++.++.|++.||+|||+++ +|+||||||+||+++.++.+||+|||++......
T Consensus 119 ~~L~~~l~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~ 196 (309)
T 3p86_A 119 GSLYRLLHKSG--AREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSS 196 (309)
T ss_dssp CBHHHHHHSTT--HHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC------------
T ss_pred CcHHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCcccccccccc
Confidence 99999997432 1124899999999999999999999875 3999999999999999999999999998765432
Q ss_pred CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccCC
Q 036334 501 TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHN 580 (654)
Q Consensus 501 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 580 (654)
....++..|+|||++.+..++.++|||||||++|||++|+.||..... ............ ....
T Consensus 197 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~------~~~~~~~~~~~~----------~~~~ 260 (309)
T 3p86_A 197 KSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNP------AQVVAAVGFKCK----------RLEI 260 (309)
T ss_dssp -----CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCH------HHHHHHHHHSCC----------CCCC
T ss_pred ccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHhcCC----------CCCC
Confidence 234577889999999999999999999999999999999999975321 111111111100 0011
Q ss_pred hHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCC
Q 036334 581 IEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGE 620 (654)
Q Consensus 581 ~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 620 (654)
......++.+++.+||+.||++|||++++++.|+.+.+..
T Consensus 261 ~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~ 300 (309)
T 3p86_A 261 PRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA 300 (309)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC--
T ss_pred CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhC
Confidence 1122335778888999999999999999999999998754
No 26
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=2.1e-42 Score=366.93 Aligned_cols=253 Identities=26% Similarity=0.392 Sum_probs=203.6
Q ss_pred hhccccccCceeEEEEEec--------CCcEEEEEEeccccc--CHHHHHHHHHHHhcc-CCCccccccEEEEeCCceEE
Q 036334 350 SAEVLGKGSVGTSYKAVLE--------EGTTVVVKRLKEVAV--GKREFEMQMEVLGKI-KHDNVVPLRAFYYSKDEKLL 418 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~--------~g~~vavK~~~~~~~--~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~~~~l 418 (654)
+.+.||+|+||.||+|... ++..||||+++.... ..+++.+|+++++++ +||||++++++|.+.+..++
T Consensus 85 ~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~l 164 (370)
T 2psq_A 85 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV 164 (370)
T ss_dssp EEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCEE
T ss_pred eeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEEE
Confidence 4578999999999999852 356799999976532 345788999999999 89999999999999999999
Q ss_pred EEEecCCCchhhhhccCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeE
Q 036334 419 VYDYMPAGSLSALLHGSRGS-----------GRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDAC 487 (654)
Q Consensus 419 v~e~~~~g~L~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~k 487 (654)
||||+++|+|.+++...... ....+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+|
T Consensus 165 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~k 243 (370)
T 2psq_A 165 IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK-CIHRDLAARNVLVTENNVMK 243 (370)
T ss_dssp EEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEE
T ss_pred EEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-eeccccchhhEEECCCCCEE
Confidence 99999999999999754311 1245899999999999999999999998 99999999999999999999
Q ss_pred EeccCCCCCcCCC------CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHH
Q 036334 488 VSDFGLNPLFGNT------TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQS 560 (654)
Q Consensus 488 l~Dfgla~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~pf~~~~~~~~~~~~~~~~~ 560 (654)
|+|||++...... ....++..|+|||++.+..++.++|||||||++|||++ |+.||...... .....
T Consensus 244 l~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~------~~~~~ 317 (370)
T 2psq_A 244 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE------ELFKL 317 (370)
T ss_dssp ECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG------GHHHH
T ss_pred EccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH------HHHHH
Confidence 9999999765432 22334567999999999999999999999999999999 99999753221 11111
Q ss_pred HhhhchhhhhhhHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCC
Q 036334 561 VVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGE 620 (654)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 620 (654)
+..... .........++.+++.+||+.||++||++.|+++.|+++....
T Consensus 318 -~~~~~~----------~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~ 366 (370)
T 2psq_A 318 -LKEGHR----------MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT 366 (370)
T ss_dssp -HHTTCC----------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred -HhcCCC----------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHh
Confidence 111110 0111223346778888999999999999999999999987543
No 27
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=3.3e-42 Score=354.33 Aligned_cols=241 Identities=23% Similarity=0.356 Sum_probs=197.8
Q ss_pred hhccccccCceeEEEEEe-cCCcEEEEEEeccc-ccCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCCCc
Q 036334 350 SAEVLGKGSVGTSYKAVL-EEGTTVVVKRLKEV-AVGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGS 427 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~-~~g~~vavK~~~~~-~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g~ 427 (654)
..+.||+|+||+||+|.. .+|+.||||++... ....+.+.+|+.++++++||||+++++++..++..++||||+++|+
T Consensus 24 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~ 103 (297)
T 3fxz_A 24 RFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGS 103 (297)
T ss_dssp CCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCB
T ss_pred eeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCCCCC
Confidence 347899999999999985 56899999998655 3445678899999999999999999999999999999999999999
Q ss_pred hhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC----CCC
Q 036334 428 LSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT----TPP 503 (654)
Q Consensus 428 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~----~~~ 503 (654)
|.+++.. ..+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++...... ...
T Consensus 104 L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 176 (297)
T 3fxz_A 104 LTDVVTE------TCMDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM 176 (297)
T ss_dssp HHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCC
T ss_pred HHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHhCC-ceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccccCCc
Confidence 9999973 24899999999999999999999998 999999999999999999999999998765433 234
Q ss_pred CccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccCChHH
Q 036334 504 TRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEE 583 (654)
Q Consensus 504 ~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 583 (654)
.++..|+|||++.+..++.++|||||||++|||++|+.||..... ............. .......
T Consensus 177 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~------~~~~~~~~~~~~~---------~~~~~~~ 241 (297)
T 3fxz_A 177 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP------LRALYLIATNGTP---------ELQNPEK 241 (297)
T ss_dssp CSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHHHHCSC---------CCSCGGG
T ss_pred cCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHhCCCC---------CCCCccc
Confidence 577889999999999999999999999999999999999965321 1111111111110 0111122
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 036334 584 EMVQLLQIAMGCVSTVPDQRPAMQEVVRM 612 (654)
Q Consensus 584 ~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 612 (654)
....+.+++.+||+.||++|||++|+++.
T Consensus 242 ~~~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 242 LSAIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred cCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 23456778889999999999999999863
No 28
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=4.1e-42 Score=347.95 Aligned_cols=248 Identities=24% Similarity=0.360 Sum_probs=205.8
Q ss_pred hhccccccCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCCCchh
Q 036334 350 SAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLS 429 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g~L~ 429 (654)
+.+.||+|+||.||+|...++..||+|+++......+++.+|++++++++||||+++++++.+.+..++||||+++++|.
T Consensus 12 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 91 (268)
T 3sxs_A 12 LLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLL 91 (268)
T ss_dssp EEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTCBHH
T ss_pred eeeeeccCCCceEEEEEecCceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCCCcHH
Confidence 45789999999999999988889999999887777888999999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCCC-----CCC
Q 036334 430 ALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTT-----PPT 504 (654)
Q Consensus 430 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~-----~~~ 504 (654)
+++... ...+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++....... ...
T Consensus 92 ~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~ 166 (268)
T 3sxs_A 92 NYLRSH----GKGLEPSQLLEMCYDVCEGMAFLESHQ-FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTK 166 (268)
T ss_dssp HHHHHH----GGGCCHHHHHHHHHHHHHHHHHHHHTT-EEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCSCC
T ss_pred HHHHHc----CCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCcCcceEEECCCCCEEEccCccceecchhhhhcccCCC
Confidence 999743 234899999999999999999999998 9999999999999999999999999987654332 233
Q ss_pred ccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccCChHH
Q 036334 505 RVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEE 583 (654)
Q Consensus 505 ~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 583 (654)
++..|+|||++.+..++.++||||||+++|||++ |+.||..... ............ ......
T Consensus 167 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~------~~~~~~~~~~~~-----------~~~~~~ 229 (268)
T 3sxs_A 167 FPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTN------SEVVLKVSQGHR-----------LYRPHL 229 (268)
T ss_dssp CCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCH------HHHHHHHHTTCC-----------CCCCTT
T ss_pred cCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccCh------HHHHHHHHcCCC-----------CCCCCc
Confidence 4556999999988889999999999999999999 9999865322 111111111110 000111
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcC
Q 036334 584 EMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRG 619 (654)
Q Consensus 584 ~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 619 (654)
....+.+++.+||+.||++|||++|+++.|+++++.
T Consensus 230 ~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 230 ASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp SCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred ChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 123577788899999999999999999999999765
No 29
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=7.8e-42 Score=356.16 Aligned_cols=249 Identities=24% Similarity=0.382 Sum_probs=201.7
Q ss_pred hhccccccCceeEEEEEec----CCcEEEEEEecccc--cCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEec
Q 036334 350 SAEVLGKGSVGTSYKAVLE----EGTTVVVKRLKEVA--VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYM 423 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~----~g~~vavK~~~~~~--~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 423 (654)
+.+.||+|+||.||+|.+. .+..||||+++... ...+++.+|+.++++++||||+++++++.+++..++||||+
T Consensus 53 i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 132 (325)
T 3kul_A 53 IEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYM 132 (325)
T ss_dssp EEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEEEECC
T ss_pred EeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEEeeCC
Confidence 4578999999999999974 35569999997642 23467899999999999999999999999999999999999
Q ss_pred CCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCCC--
Q 036334 424 PAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTT-- 501 (654)
Q Consensus 424 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~-- 501 (654)
++|+|.+++... ...+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 133 ~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 207 (325)
T 3kul_A 133 ENGSLDTFLRTH----DGQFTIMQLVGMLRGVGAGMRYLSDLG-YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDA 207 (325)
T ss_dssp TTCBHHHHHHTT----TTCSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCSSCEECC----C
T ss_pred CCCcHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCcceEEECCCCCEEECCCCcccccccCccc
Confidence 999999999743 245999999999999999999999998 9999999999999999999999999998764331
Q ss_pred -----CCCccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhh
Q 036334 502 -----PPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVEL 575 (654)
Q Consensus 502 -----~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 575 (654)
...++..|+|||++.+..++.++|||||||++|||++ |+.||..... ......+....
T Consensus 208 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~------~~~~~~~~~~~---------- 271 (325)
T 3kul_A 208 AYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN------RDVISSVEEGY---------- 271 (325)
T ss_dssp CEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCH------HHHHHHHHTTC----------
T ss_pred eeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCH------HHHHHHHHcCC----------
Confidence 1233456999999998899999999999999999999 9999965322 11111111110
Q ss_pred hccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCC
Q 036334 576 MRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGE 620 (654)
Q Consensus 576 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 620 (654)
...........+.+++.+||+.||++|||+.++++.|+++.+..
T Consensus 272 -~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~ 315 (325)
T 3kul_A 272 -RLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSP 315 (325)
T ss_dssp -CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSC
T ss_pred -CCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCc
Confidence 01111223346778888999999999999999999999998653
No 30
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=7.5e-42 Score=351.96 Aligned_cols=251 Identities=25% Similarity=0.420 Sum_probs=193.3
Q ss_pred hhccccccCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHhc--cCCCccccccEEEEeC----CceEEEEEec
Q 036334 350 SAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGK--IKHDNVVPLRAFYYSK----DEKLLVYDYM 423 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~--l~hpniv~l~~~~~~~----~~~~lv~e~~ 423 (654)
+.+.||+|+||+||+|.. +|+.||||++.... ...+.+|.+++.. ++||||+++++++... ...++||||+
T Consensus 12 ~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~ 88 (301)
T 3q4u_A 12 LLECVGKGRYGEVWRGSW-QGENVAVKIFSSRD--EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYH 88 (301)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEECGGG--HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCC
T ss_pred EEEeeccCCCcEEEEEEE-CCEEEEEEEecccc--chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhhc
Confidence 357899999999999988 58999999987543 3445556665554 7999999999987653 3579999999
Q ss_pred CCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhh--------ccCCeecCCCCCCcEEECCCCCeEEeccCCCC
Q 036334 424 PAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLH--------VSGKIVHGNIKASNILLRPDHDACVSDFGLNP 495 (654)
Q Consensus 424 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH--------~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~ 495 (654)
++|+|.++++. ..+++..+++++.|++.||+||| +.+ |+||||||+|||++.++.+||+|||++.
T Consensus 89 ~~g~L~~~l~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~-ivH~Dlkp~Nill~~~~~~kl~Dfg~a~ 161 (301)
T 3q4u_A 89 EMGSLYDYLQL------TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA-IAHRDLKSKNILVKKNGQCCIADLGLAV 161 (301)
T ss_dssp TTCBHHHHHTT------CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE-EECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred cCCCHHHHHhh------cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC-eecCCCChHhEEEcCCCCEEEeeCCCee
Confidence 99999999962 35999999999999999999999 777 9999999999999999999999999986
Q ss_pred CcCCC--------CCCCccccccCccccCCC------CCCcchhHHHHHHHHHHHHhC----------CCCCCCCCCCCC
Q 036334 496 LFGNT--------TPPTRVAGYRAPEVVETR------KVTFKSDVYSFGVLLLELLTG----------KAPNQASLGEEG 551 (654)
Q Consensus 496 ~~~~~--------~~~~~~~~y~aPE~~~~~------~~~~~~DvwslGvil~el~tg----------~~pf~~~~~~~~ 551 (654)
..... ....++..|+|||++.+. .++.++|||||||++|||++| +.||........
T Consensus 162 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~ 241 (301)
T 3q4u_A 162 MHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDP 241 (301)
T ss_dssp EEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred ecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCc
Confidence 54332 223678889999999876 455799999999999999999 778765433221
Q ss_pred CChhHHHHHHhhhchhhhhhhHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 036334 552 IDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616 (654)
Q Consensus 552 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 616 (654)
. . ..+......... .+..............+.+++.+||+.||++|||++|+++.|+++
T Consensus 242 ~-~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 242 S-F-EDMRKVVCVDQQ----RPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp C-H-HHHHHHHTTSCC----CCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred c-h-hhhhHHHhccCC----CCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 1 1 111111111100 111111111234566788999999999999999999999999986
No 31
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=2.1e-41 Score=353.75 Aligned_cols=252 Identities=13% Similarity=0.176 Sum_probs=202.5
Q ss_pred hccccccCceeEEEEEe-cCCcEEEEEEecccccCHHHHHHHHHHHhcc-CCCccccccEEEEeCCceEEEEEecCCCch
Q 036334 351 AEVLGKGSVGTSYKAVL-EEGTTVVVKRLKEVAVGKREFEMQMEVLGKI-KHDNVVPLRAFYYSKDEKLLVYDYMPAGSL 428 (654)
Q Consensus 351 ~~~lg~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e~~~~g~L 428 (654)
.+.||+|+||+||+|.. .+|+.||||++.... ....+.+|+++++++ +||||+++++++.+.+..++||||+ +++|
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L 91 (330)
T 2izr_A 14 GKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS-RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-GPSL 91 (330)
T ss_dssp EEECCC-CTTSEEEEEETTTTEEEEEEEEETTC-SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred EEEeeccCCceEEEEEECCCCcEEEEEEecccc-chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-CCCH
Confidence 57899999999999995 568999999986543 234688999999999 9999999999999999999999999 9999
Q ss_pred hhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCC-----eEEeccCCCCCcCCC---
Q 036334 429 SALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHD-----ACVSDFGLNPLFGNT--- 500 (654)
Q Consensus 429 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~-----~kl~Dfgla~~~~~~--- 500 (654)
.+++... ...+++..++.++.|++.||+|||+.+ |+||||||+|||++.++. +||+|||++......
T Consensus 92 ~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~LH~~~-iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~ 166 (330)
T 2izr_A 92 EDLFDLC----DRTFSLKTVLMIAIQLISRMEYVHSKN-LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETK 166 (330)
T ss_dssp HHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTC
T ss_pred HHHHHHc----CCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCCC
Confidence 9999753 246999999999999999999999998 999999999999999887 999999999765322
Q ss_pred --------CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhh
Q 036334 501 --------TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFD 572 (654)
Q Consensus 501 --------~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 572 (654)
....++..|+|||++.+..++.++|||||||++|||++|+.||......+ ....+..+....... .
T Consensus 167 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~---~~~~~~~i~~~~~~~---~ 240 (330)
T 2izr_A 167 KHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADT---LKERYQKIGDTKRAT---P 240 (330)
T ss_dssp CBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSS---HHHHHHHHHHHHHHS---C
T ss_pred ccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcccccccc---HHHHHHHHHhhhccC---C
Confidence 23457788999999999999999999999999999999999998653322 222222221111100 0
Q ss_pred HhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCC
Q 036334 573 VELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGE 620 (654)
Q Consensus 573 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 620 (654)
... .... .. ++.+++..||+.||.+||++.+|++.|+++....
T Consensus 241 ~~~-~~~~---~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~ 283 (330)
T 2izr_A 241 IEV-LCEN---FP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRK 283 (330)
T ss_dssp HHH-HTTT---CH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred HHH-Hhcc---Ch-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHc
Confidence 000 0001 11 6778888999999999999999999999887544
No 32
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=1.6e-41 Score=346.49 Aligned_cols=249 Identities=22% Similarity=0.335 Sum_probs=204.5
Q ss_pred hhccccccCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCCCchh
Q 036334 350 SAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLS 429 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g~L~ 429 (654)
+.+.||+|+||.||++...++..||+|+++......+++.+|++++++++||||+++++++.+.+..++||||+++|+|.
T Consensus 28 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 107 (283)
T 3gen_A 28 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLL 107 (283)
T ss_dssp EEEECC---CEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTTCBHH
T ss_pred hHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCCCcHH
Confidence 45789999999999999988889999999887777888999999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC-----CCCC
Q 036334 430 ALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT-----TPPT 504 (654)
Q Consensus 430 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~-----~~~~ 504 (654)
+++... ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++...... ....
T Consensus 108 ~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~ 182 (283)
T 3gen_A 108 NYLREM----RHRFQTQQLLEMCKDVCEAMEYLESKQ-FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSK 182 (283)
T ss_dssp HHHHCG----GGCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTTSTT
T ss_pred HHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCCccceEEEcCCCCEEEccccccccccccccccccCCc
Confidence 999743 235899999999999999999999998 999999999999999999999999999766432 2334
Q ss_pred ccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccCChHH
Q 036334 505 RVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEE 583 (654)
Q Consensus 505 ~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 583 (654)
++..|+|||++.+..++.++||||||+++|||++ |+.||..... ......+.... .......
T Consensus 183 ~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~------~~~~~~~~~~~-----------~~~~~~~ 245 (283)
T 3gen_A 183 FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTN------SETAEHIAQGL-----------RLYRPHL 245 (283)
T ss_dssp SCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCH------HHHHHHHHTTC-----------CCCCCTT
T ss_pred cCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccCh------hHHHHHHhccc-----------CCCCCCc
Confidence 5567999999998899999999999999999998 9999975322 11111111110 0000111
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCC
Q 036334 584 EMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGE 620 (654)
Q Consensus 584 ~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 620 (654)
....+.+++.+||+.||++|||++|+++.|+++.+.+
T Consensus 246 ~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~e 282 (283)
T 3gen_A 246 ASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 282 (283)
T ss_dssp CCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhcc
Confidence 1235777888999999999999999999999987543
No 33
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=1.3e-41 Score=370.92 Aligned_cols=249 Identities=25% Similarity=0.460 Sum_probs=206.2
Q ss_pred hhccccccCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCCCchh
Q 036334 350 SAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLS 429 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g~L~ 429 (654)
+.+.||+|+||+||+|.+.++..||||+++......+++.+|+.+|++++||||+++++++. .+..++||||+++|+|.
T Consensus 192 ~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~~g~L~ 270 (454)
T 1qcf_A 192 LEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLL 270 (454)
T ss_dssp EEEEEECCSSEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCTTCBHH
T ss_pred EEEEcccCCceEEEEEEECCccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecCCCcHH
Confidence 35789999999999999988899999999887777889999999999999999999999986 66789999999999999
Q ss_pred hhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC-----CCCC
Q 036334 430 ALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT-----TPPT 504 (654)
Q Consensus 430 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~-----~~~~ 504 (654)
+++.... ...+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++...... ....
T Consensus 271 ~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~ 346 (454)
T 1qcf_A 271 DFLKSDE---GSKQPLPKLIDFSAQIAEGMAFIEQRN-YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAK 346 (454)
T ss_dssp HHHHSHH---HHTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTCSSS
T ss_pred HHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccCCCc
Confidence 9997432 235889999999999999999999998 999999999999999999999999999876432 2233
Q ss_pred ccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccCChHH
Q 036334 505 RVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEE 583 (654)
Q Consensus 505 ~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 583 (654)
++..|+|||++....++.++|||||||++|||++ |+.||..... ......+.. .. .......
T Consensus 347 ~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~------~~~~~~i~~-~~----------~~~~~~~ 409 (454)
T 1qcf_A 347 FPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN------PEVIRALER-GY----------RMPRPEN 409 (454)
T ss_dssp SCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH------HHHHHHHHH-TC----------CCCCCTT
T ss_pred ccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCH------HHHHHHHHc-CC----------CCCCCCC
Confidence 4567999999998899999999999999999999 9999975321 122221111 11 0111122
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCC
Q 036334 584 EMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGE 620 (654)
Q Consensus 584 ~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 620 (654)
...++.+++.+||+.||++|||+++|++.|+++....
T Consensus 410 ~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~ 446 (454)
T 1qcf_A 410 CPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTAT 446 (454)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSS
T ss_pred CCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhcc
Confidence 3346778888999999999999999999999987554
No 34
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=1.8e-40 Score=342.80 Aligned_cols=258 Identities=33% Similarity=0.528 Sum_probs=206.7
Q ss_pred ccccccCceeEEEEEecCCcEEEEEEecccc-----cCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCCC
Q 036334 352 EVLGKGSVGTSYKAVLEEGTTVVVKRLKEVA-----VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAG 426 (654)
Q Consensus 352 ~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~-----~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g 426 (654)
+.||+|+||.||+|.. +++.||||++.... ...+.+.+|+.++++++||||+++++++.+.+..++||||+++|
T Consensus 37 ~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 115 (307)
T 2nru_A 37 NKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNG 115 (307)
T ss_dssp CEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred CccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEEecCCC
Confidence 6799999999999987 48899999986532 22467889999999999999999999999999999999999999
Q ss_pred chhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC------
Q 036334 427 SLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT------ 500 (654)
Q Consensus 427 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~------ 500 (654)
+|.+++.... ....+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++......
T Consensus 116 ~L~~~l~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~ 192 (307)
T 2nru_A 116 SLLDRLSCLD--GTPPLSWHMRCKIAQGAANGINFLHENH-HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMT 192 (307)
T ss_dssp BHHHHHHTGG--GCCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSCEEC
T ss_pred cHHHHHHhcc--CCCCCCHHHHHHHHHHHHHHHHHHhcCC-eecCCCCHHHEEEcCCCcEEEeecccccccccccccccc
Confidence 9999997433 2346999999999999999999999998 999999999999999999999999998765432
Q ss_pred CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhc-hhhhhhhHhhhccC
Q 036334 501 TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREE-WTAEVFDVELMRYH 579 (654)
Q Consensus 501 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 579 (654)
....++..|+|||++.+ .++.++||||||+++|||++|..||....... ....+........ .....++..+ ..
T Consensus 193 ~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~--~~ 267 (307)
T 2nru_A 193 SRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQ--LLLDIKEEIEDEEKTIEDYIDKKM--ND 267 (307)
T ss_dssp SSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSS--BTTHHHHHHHTTSCCHHHHSCSSC--SC
T ss_pred cccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchH--HHHHHHHHhhhhhhhhhhhccccc--cc
Confidence 22356788999998865 58899999999999999999999998654332 1222222221111 1111122111 12
Q ss_pred ChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhc
Q 036334 580 NIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNR 618 (654)
Q Consensus 580 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 618 (654)
........+.+++.+||+.||++|||++++++.|+++..
T Consensus 268 ~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 268 ADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp CCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred cchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 345566788999999999999999999999999999864
No 35
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=3.1e-41 Score=367.36 Aligned_cols=248 Identities=27% Similarity=0.423 Sum_probs=203.1
Q ss_pred hhccccccCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHhccCCCccccccEEEEeCC-ceEEEEEecCCCch
Q 036334 350 SAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSKD-EKLLVYDYMPAGSL 428 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~-~~~lv~e~~~~g~L 428 (654)
+.+.||+|+||.||+|.+. |+.||||+++... ..+.+.+|+.+|++++||||+++++++...+ ..++||||+++|+|
T Consensus 197 ~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L 274 (450)
T 1k9a_A 197 LLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL 274 (450)
T ss_dssp EEEEEEECSSEEEEEEEET-TEEEEEEEESSCT-TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTCBH
T ss_pred EEeeecCcCCeeEEEEEec-CCeEEEEEeCCch-HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCCcH
Confidence 3578999999999999986 7899999998654 4578999999999999999999999987765 78999999999999
Q ss_pred hhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC-CCCCccc
Q 036334 429 SALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT-TPPTRVA 507 (654)
Q Consensus 429 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~-~~~~~~~ 507 (654)
.+++... ....+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++...... ....++.
T Consensus 275 ~~~l~~~---~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~ 350 (450)
T 1k9a_A 275 VDYLRSR---GRSVLGGDCLLKFSLDVCEAMEYLEGNN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV 350 (450)
T ss_dssp HHHHHHH---CTTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTSCEEECCCTTCEECC------CCCT
T ss_pred HHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCCHhhEEECCCCCEEEeeCCCcccccccccCCCCCc
Confidence 9999753 2334799999999999999999999998 999999999999999999999999998765432 2234566
Q ss_pred cccCccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccCChHHHHH
Q 036334 508 GYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMV 586 (654)
Q Consensus 508 ~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 586 (654)
.|+|||++.+..++.++|||||||++|||++ |+.||......+ . ...+ ..+.. ......+..
T Consensus 351 ~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~---~---~~~i-~~~~~----------~~~p~~~~~ 413 (450)
T 1k9a_A 351 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---V---VPRV-EKGYK----------MDAPDGCPP 413 (450)
T ss_dssp TTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT---H---HHHH-HTTCC----------CCCCTTCCH
T ss_pred ceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH---H---HHHH-HcCCC----------CCCCCcCCH
Confidence 7999999999999999999999999999998 999997643321 1 1111 11111 111122334
Q ss_pred HHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCC
Q 036334 587 QLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGE 620 (654)
Q Consensus 587 ~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 620 (654)
.+.+++.+||+.||++|||+.++++.|+++...+
T Consensus 414 ~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~~ 447 (450)
T 1k9a_A 414 AVYDVMKNCWHLDAATRPTFLQLREQLEHIRTHE 447 (450)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHhh
Confidence 6778888999999999999999999999998654
No 36
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=7.8e-42 Score=355.82 Aligned_cols=242 Identities=21% Similarity=0.279 Sum_probs=193.3
Q ss_pred hhccccccCceeEEEEEec-CCcEEEEEEecccc--cCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCCC
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVA--VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAG 426 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g 426 (654)
+.+.||+|+||+||+|... +++.||||++.... ...+.+.+|+.+++.++||||+++++++.+++..++||||+++|
T Consensus 11 i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~~ 90 (323)
T 3tki_A 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGG 90 (323)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCTTE
T ss_pred eeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcCCCC
Confidence 3578999999999999965 68999999986542 23456889999999999999999999999999999999999999
Q ss_pred chhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC------
Q 036334 427 SLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT------ 500 (654)
Q Consensus 427 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~------ 500 (654)
+|.+++.. ...+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 91 ~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~LH~~g-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 164 (323)
T 3tki_A 91 ELFDRIEP-----DIGMPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 164 (323)
T ss_dssp EGGGGSBT-----TTBCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCB
T ss_pred cHHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccccchHHEEEeCCCCEEEEEeeccceeccCCccccc
Confidence 99999973 345999999999999999999999998 999999999999999999999999999755321
Q ss_pred CCCCccccccCccccCCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccC
Q 036334 501 TPPTRVAGYRAPEVVETRKV-TFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYH 579 (654)
Q Consensus 501 ~~~~~~~~y~aPE~~~~~~~-~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 579 (654)
....++..|+|||++.+..+ +.++|||||||++|||++|+.||....... ............ ..
T Consensus 165 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-----~~~~~~~~~~~~----------~~ 229 (323)
T 3tki_A 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-----QEYSDWKEKKTY----------LN 229 (323)
T ss_dssp CSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTS-----HHHHHHHTTCTT----------ST
T ss_pred CCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHH-----HHHHHHhccccc----------CC
Confidence 24567888999999987765 788999999999999999999997643321 011111111000 00
Q ss_pred ChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 036334 580 NIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRM 612 (654)
Q Consensus 580 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 612 (654)
........+.+++.+||+.||++|||++|+++.
T Consensus 230 ~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 230 PWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 011122356678889999999999999999874
No 37
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1.8e-41 Score=373.49 Aligned_cols=250 Identities=27% Similarity=0.396 Sum_probs=207.4
Q ss_pred hhccccccCceeEEEEEecC-CcEEEEEEecccccCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCCCch
Q 036334 350 SAEVLGKGSVGTSYKAVLEE-GTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSL 428 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g~L 428 (654)
+.+.||+|+||.||+|.+.. +..||||+++......++|.+|+.+|++++||||++++++|.+.+..++||||+++|+|
T Consensus 224 ~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~g~L 303 (495)
T 1opk_A 224 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 303 (495)
T ss_dssp EEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBH
T ss_pred eeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCCCCH
Confidence 45789999999999999765 88999999987777788899999999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC-----CCC
Q 036334 429 SALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT-----TPP 503 (654)
Q Consensus 429 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~-----~~~ 503 (654)
.+++.... ...+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++...... ...
T Consensus 304 ~~~l~~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~ 379 (495)
T 1opk_A 304 LDYLRECN---RQEVSAVVLLYMATQISSAMEYLEKKN-FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 379 (495)
T ss_dssp HHHHHHSC---TTTSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECCTTC
T ss_pred HHHHHhcC---cCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChhhEEECCCCcEEEeecccceeccCCceeecCCC
Confidence 99997542 345899999999999999999999998 999999999999999999999999999876432 122
Q ss_pred CccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccCChH
Q 036334 504 TRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIE 582 (654)
Q Consensus 504 ~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 582 (654)
.++..|+|||++.+..++.++|||||||++|||++ |..||...... . +...+..... .....
T Consensus 380 ~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~------~-~~~~~~~~~~----------~~~~~ 442 (495)
T 1opk_A 380 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS------Q-VYELLEKDYR----------MERPE 442 (495)
T ss_dssp CCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG------G-HHHHHHTTCC----------CCCCT
T ss_pred cCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH------H-HHHHHHcCCC----------CCCCC
Confidence 34567999999998899999999999999999999 99998754321 1 1111111111 11112
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCC
Q 036334 583 EEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGE 620 (654)
Q Consensus 583 ~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 620 (654)
....++.+++.+||+.||++|||+.+|++.|+++....
T Consensus 443 ~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~~ 480 (495)
T 1opk_A 443 GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 480 (495)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSSS
T ss_pred CCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHhcc
Confidence 23346778888999999999999999999999986543
No 38
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=7.1e-41 Score=348.27 Aligned_cols=240 Identities=21% Similarity=0.327 Sum_probs=197.0
Q ss_pred hccccccCceeEEEEEec-CCcEEEEEEecccc-cCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCCCch
Q 036334 351 AEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVA-VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSL 428 (654)
Q Consensus 351 ~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g~L 428 (654)
.+.||+|+||.||+|... +|+.||||++.... ...+.+.+|+.++++++||||+++++++...+..++||||+++|+|
T Consensus 50 ~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 129 (321)
T 2c30_A 50 YVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGAL 129 (321)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCSCBH
T ss_pred cEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCCCCH
Confidence 357999999999999976 69999999997553 3456788999999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC----CCCC
Q 036334 429 SALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT----TPPT 504 (654)
Q Consensus 429 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~----~~~~ 504 (654)
.+++.. ..+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++...... ....
T Consensus 130 ~~~l~~------~~l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 202 (321)
T 2c30_A 130 TDIVSQ------VRLNEEQIATVCEAVLQALAYLHAQG-VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLV 202 (321)
T ss_dssp HHHHTT------CCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCC
T ss_pred HHHHHh------cCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCcEEEeeeeeeeecccCcccccccc
Confidence 999863 35899999999999999999999998 999999999999999999999999998765432 3346
Q ss_pred ccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccCChHHH
Q 036334 505 RVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEE 584 (654)
Q Consensus 505 ~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 584 (654)
++..|+|||++.+..++.++|||||||++|||++|+.||..... ......+.. .... . .......
T Consensus 203 gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~------~~~~~~~~~-~~~~-----~---~~~~~~~ 267 (321)
T 2c30_A 203 GTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP------VQAMKRLRD-SPPP-----K---LKNSHKV 267 (321)
T ss_dssp SCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHHH-SSCC-----C---CTTGGGS
T ss_pred CCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHhc-CCCC-----C---cCccccC
Confidence 78889999999999999999999999999999999999975321 111111111 1000 0 0011112
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 036334 585 MVQLLQIAMGCVSTVPDQRPAMQEVVRM 612 (654)
Q Consensus 585 ~~~l~~l~~~cl~~dP~~RPs~~evl~~ 612 (654)
...+.+++.+||+.||++|||++|+++.
T Consensus 268 ~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 268 SPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 2356778889999999999999999874
No 39
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=2.7e-41 Score=352.14 Aligned_cols=239 Identities=20% Similarity=0.296 Sum_probs=196.8
Q ss_pred hhccccccCceeEEEEEe-cCCcEEEEEEecccccC---HHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCC
Q 036334 350 SAEVLGKGSVGTSYKAVL-EEGTTVVVKRLKEVAVG---KREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPA 425 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~---~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~ 425 (654)
+.+.||+|+||.||+|.. .+|+.||||++...... .+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 19 ~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~ 98 (328)
T 3fe3_A 19 LLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASG 98 (328)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEECCCC
Confidence 357899999999999996 57999999999765433 35678899999999999999999999999999999999999
Q ss_pred CchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC---CC
Q 036334 426 GSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT---TP 502 (654)
Q Consensus 426 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~---~~ 502 (654)
|+|.+++... ..+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++...... ..
T Consensus 99 ~~L~~~l~~~-----~~l~~~~~~~~~~qi~~al~~lH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~ 172 (328)
T 3fe3_A 99 GEVFDYLVAH-----GRMKEKEARSKFRQIVSAVQYCHQKR-IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDA 172 (328)
T ss_dssp CBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCGGGT
T ss_pred CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC-EeccCCCHHHEEEcCCCCEEEeeccCceecCCCCcccc
Confidence 9999999742 45899999999999999999999998 999999999999999999999999999765433 34
Q ss_pred CCccccccCccccCCCCCC-cchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccCCh
Q 036334 503 PTRVAGYRAPEVVETRKVT-FKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNI 581 (654)
Q Consensus 503 ~~~~~~y~aPE~~~~~~~~-~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 581 (654)
..+++.|+|||++.+..++ .++||||+||++|||++|+.||.... .......+...... ..
T Consensus 173 ~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~------~~~~~~~i~~~~~~---------~p--- 234 (328)
T 3fe3_A 173 FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN------LKELRERVLRGKYR---------IP--- 234 (328)
T ss_dssp TSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHCCCC---------CC---
T ss_pred ccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCC------HHHHHHHHHhCCCC---------CC---
Confidence 5678889999999887765 89999999999999999999997532 22222222222110 01
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 036334 582 EEEMVQLLQIAMGCVSTVPDQRPAMQEVVRM 612 (654)
Q Consensus 582 ~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 612 (654)
.....++.+++.+||..||++|||++|+++.
T Consensus 235 ~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 235 FYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp TTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred CCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 1122356678889999999999999999864
No 40
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=4.1e-42 Score=365.86 Aligned_cols=248 Identities=22% Similarity=0.342 Sum_probs=201.6
Q ss_pred hhccccccCceeEEEEEec-CCcEEEEEEeccccc--CHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCCC
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAV--GKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAG 426 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g 426 (654)
+.+.||+|+||.||+|.+. +++.||||+++.... ..+++.+|++++++++||||+++++++.+++..++||||+++|
T Consensus 118 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g 197 (377)
T 3cbl_A 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG 197 (377)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred EeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcCCCC
Confidence 4578999999999999976 689999999875432 2346788999999999999999999999999999999999999
Q ss_pred chhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC------
Q 036334 427 SLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT------ 500 (654)
Q Consensus 427 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~------ 500 (654)
+|.+++... ...+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 198 ~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~~ 272 (377)
T 3cbl_A 198 DFLTFLRTE----GARLRVKTLLQMVGDAAAGMEYLESKC-CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASG 272 (377)
T ss_dssp BHHHHHHHH----GGGCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECCS
T ss_pred CHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCC-cCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeecC
Confidence 999999743 235899999999999999999999998 999999999999999999999999998764432
Q ss_pred CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccC
Q 036334 501 TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYH 579 (654)
Q Consensus 501 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 579 (654)
....++..|+|||++.+..++.++|||||||++|||++ |..||...... .+...+..... ..
T Consensus 273 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~-------~~~~~~~~~~~----------~~ 335 (377)
T 3cbl_A 273 GLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ-------QTREFVEKGGR----------LP 335 (377)
T ss_dssp SCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH-------HHHHHHHTTCC----------CC
T ss_pred CCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-------HHHHHHHcCCC----------CC
Confidence 11223556999999988889999999999999999998 99998753221 11111111110 01
Q ss_pred ChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcC
Q 036334 580 NIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRG 619 (654)
Q Consensus 580 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 619 (654)
........+.+++.+||+.||++|||++++++.|+++.+.
T Consensus 336 ~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 336 CPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence 1112234677888899999999999999999999998754
No 41
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.7e-41 Score=348.21 Aligned_cols=253 Identities=27% Similarity=0.414 Sum_probs=195.9
Q ss_pred hhccccccCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCCCchh
Q 036334 350 SAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLS 429 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g~L~ 429 (654)
+.+.||+|+||.||+|... ++.||||++... ...+.+.+|++++++++||||+++++++. +..++||||+++|+|.
T Consensus 12 ~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~~~~L~ 87 (307)
T 2eva_A 12 VEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE-SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLY 87 (307)
T ss_dssp EEEEEECCSSSEEEEEEET-TEEEEEEECSST-THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCTTCBHH
T ss_pred eeeEeecCCCceEEEEEEC-CeeEEEEEecCh-hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCCCCCHH
Confidence 3578999999999999986 789999998643 34567899999999999999999999876 4589999999999999
Q ss_pred hhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhc---cCCeecCCCCCCcEEECCCCC-eEEeccCCCCCcCCC-CCCC
Q 036334 430 ALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV---SGKIVHGNIKASNILLRPDHD-ACVSDFGLNPLFGNT-TPPT 504 (654)
Q Consensus 430 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~---~~~ivHrDlk~~NIll~~~~~-~kl~Dfgla~~~~~~-~~~~ 504 (654)
+++.... ....+++..++.++.|+++||+|||+ ++ |+||||||+||+++.++. +||+|||++...... ....
T Consensus 88 ~~l~~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~-ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~~~~~ 164 (307)
T 2eva_A 88 NVLHGAE--PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA-LIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK 164 (307)
T ss_dssp HHHHCSS--SEECCCHHHHHHHHHHHHHHHHHHHTCSSSC-CCCCCCSGGGEEEETTTTEEEECCCCC------------
T ss_pred HHHhccC--CCCccCHHHHHHHHHHHHHHHHHHHhCCCCC-eecCCCChhHEEEeCCCCEEEEcccccccccccccccCC
Confidence 9997542 12357899999999999999999998 66 999999999999998887 799999998765433 3345
Q ss_pred ccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccCChHHH
Q 036334 505 RVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEE 584 (654)
Q Consensus 505 ~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 584 (654)
++..|+|||++.+..++.++||||||+++|||++|+.||...... ............ . .......
T Consensus 165 gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~----~~~~~~~~~~~~-~----------~~~~~~~ 229 (307)
T 2eva_A 165 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGP----AFRIMWAVHNGT-R----------PPLIKNL 229 (307)
T ss_dssp CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSS----HHHHHHHHHTTC-C----------CCCBTTC
T ss_pred CCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCcc----HHHHHHHHhcCC-C----------CCccccc
Confidence 788899999999999999999999999999999999999753221 111111111110 0 0111122
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCCCCCC
Q 036334 585 MVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGETDDG 624 (654)
Q Consensus 585 ~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~ 624 (654)
...+.+++.+||+.||++|||++|+++.|+++.+......
T Consensus 230 ~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~~ 269 (307)
T 2eva_A 230 PKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGAD 269 (307)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCCCTT
T ss_pred CHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhccCCC
Confidence 2356778889999999999999999999999987654433
No 42
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1.5e-41 Score=360.56 Aligned_cols=249 Identities=25% Similarity=0.428 Sum_probs=193.9
Q ss_pred hhccccccCceeEEEEEec----CCcEEEEEEecccc--cCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEec
Q 036334 350 SAEVLGKGSVGTSYKAVLE----EGTTVVVKRLKEVA--VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYM 423 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~----~g~~vavK~~~~~~--~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 423 (654)
+.+.||+|+||.||+|... ++..||||+++... ...+++.+|+.++++++||||+++++++.+.+..++||||+
T Consensus 49 ~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 128 (373)
T 2qol_A 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYM 128 (373)
T ss_dssp CCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred eeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEEeCC
Confidence 3578999999999999864 47789999997643 23467899999999999999999999999999999999999
Q ss_pred CCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCCCC-
Q 036334 424 PAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTP- 502 (654)
Q Consensus 424 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~- 502 (654)
++|+|.+++... ...+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++........
T Consensus 129 ~~~sL~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 203 (373)
T 2qol_A 129 ENGSLDSFLRKH----DAQFTVIQLVGMLRGIASGMKYLSDMG-YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEA 203 (373)
T ss_dssp TTCBHHHHHHTT----TTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCC------------
T ss_pred CCCcHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCcceEEEcCCCCEEECcCccccccccCCcc
Confidence 999999999743 345899999999999999999999998 99999999999999999999999999987643311
Q ss_pred ------CCccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhh
Q 036334 503 ------PTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVEL 575 (654)
Q Consensus 503 ------~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 575 (654)
..++..|+|||++.+..++.++|||||||++|||++ |+.||..... ......+ ....
T Consensus 204 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~------~~~~~~i-~~~~--------- 267 (373)
T 2qol_A 204 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN------QDVIKAV-DEGY--------- 267 (373)
T ss_dssp ----------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCH------HHHHHHH-HTTE---------
T ss_pred ceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCH------HHHHHHH-HcCC---------
Confidence 123456999999998999999999999999999998 9999965321 1111111 1110
Q ss_pred hccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCC
Q 036334 576 MRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGE 620 (654)
Q Consensus 576 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 620 (654)
...........+.+++.+||+.||++||++.++++.|+++.+..
T Consensus 268 -~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~ 311 (373)
T 2qol_A 268 -RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311 (373)
T ss_dssp -ECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred -CCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence 01111223346788889999999999999999999999997654
No 43
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=6.1e-41 Score=357.47 Aligned_cols=259 Identities=26% Similarity=0.376 Sum_probs=206.2
Q ss_pred hhccccccCceeEEEEEec--------CCcEEEEEEeccccc--CHHHHHHHHHHHhcc-CCCccccccEEEEeCCceEE
Q 036334 350 SAEVLGKGSVGTSYKAVLE--------EGTTVVVKRLKEVAV--GKREFEMQMEVLGKI-KHDNVVPLRAFYYSKDEKLL 418 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~--------~g~~vavK~~~~~~~--~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~~~~l 418 (654)
+.+.||+|+||.||+|... .+..||||+++.... ...++.+|+++++++ +||||++++++|.+++..++
T Consensus 73 i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~l 152 (382)
T 3tt0_A 73 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYV 152 (382)
T ss_dssp EEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred eeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCceEE
Confidence 4578999999999999852 245799999976533 236688999999999 89999999999999999999
Q ss_pred EEEecCCCchhhhhccCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeE
Q 036334 419 VYDYMPAGSLSALLHGSRGS-----------GRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDAC 487 (654)
Q Consensus 419 v~e~~~~g~L~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~k 487 (654)
||||+++|+|.+++...... ....+++..+++++.|++.||+|||+++ |+||||||+|||++.++.+|
T Consensus 153 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~k 231 (382)
T 3tt0_A 153 IVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK-CIHRDLAARNVLVTEDNVMK 231 (382)
T ss_dssp EEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEE
T ss_pred EEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCcceEEEcCCCcEE
Confidence 99999999999999754311 1245999999999999999999999998 99999999999999999999
Q ss_pred EeccCCCCCcCCC------CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHH
Q 036334 488 VSDFGLNPLFGNT------TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQS 560 (654)
Q Consensus 488 l~Dfgla~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~pf~~~~~~~~~~~~~~~~~ 560 (654)
|+|||++...... ....++..|+|||++.+..++.++|||||||++|||++ |..||.... .......
T Consensus 232 L~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~------~~~~~~~ 305 (382)
T 3tt0_A 232 IADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP------VEELFKL 305 (382)
T ss_dssp ECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC------HHHHHHH
T ss_pred EcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC------HHHHHHH
Confidence 9999999866432 22344567999999999999999999999999999999 999986532 1122211
Q ss_pred HhhhchhhhhhhHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCCCCCCCC
Q 036334 561 VVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGETDDGLR 626 (654)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~ 626 (654)
+ ..... .........++.+++.+||+.||++|||++|+++.|+++..........
T Consensus 306 ~-~~~~~----------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~~~~ 360 (382)
T 3tt0_A 306 L-KEGHR----------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQEMG 360 (382)
T ss_dssp H-HTTCC----------CCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCSCC--
T ss_pred H-HcCCC----------CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhcCCCC
Confidence 1 11110 0011122346778888999999999999999999999998665444433
No 44
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.5e-41 Score=349.88 Aligned_cols=256 Identities=24% Similarity=0.390 Sum_probs=195.9
Q ss_pred HhhccccccCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHhc--cCCCccccccEEEEeC----CceEEEEEe
Q 036334 349 ASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGK--IKHDNVVPLRAFYYSK----DEKLLVYDY 422 (654)
Q Consensus 349 ~~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~--l~hpniv~l~~~~~~~----~~~~lv~e~ 422 (654)
.+.+.||+|+||.||+|... |+.||||++..... ..+.+|.+++.. ++||||+++++++... ...++||||
T Consensus 40 ~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~--~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~ 116 (337)
T 3mdy_A 40 QMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEE--ASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDY 116 (337)
T ss_dssp EEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGGH--HHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECC
T ss_pred EEEeEeecCCCeEEEEEEEC-CceEEEEEEecccc--chhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEec
Confidence 45688999999999999986 89999999865433 334445555444 5899999999999887 678999999
Q ss_pred cCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcc--------CCeecCCCCCCcEEECCCCCeEEeccCCC
Q 036334 423 MPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS--------GKIVHGNIKASNILLRPDHDACVSDFGLN 494 (654)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~--------~~ivHrDlk~~NIll~~~~~~kl~Dfgla 494 (654)
+++|+|.+++.. ..+++..++.++.|++.||+|||++ + |+||||||+|||++.++.+||+|||++
T Consensus 117 ~~~g~L~~~l~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~-ivH~Dikp~Nill~~~~~~kl~Dfg~a 189 (337)
T 3mdy_A 117 HENGSLYDYLKS------TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLA 189 (337)
T ss_dssp CTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCC-EECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred cCCCcHHHHhhc------cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCC-EEecccchHHEEECCCCCEEEEeCCCc
Confidence 999999999963 2489999999999999999999987 7 999999999999999999999999999
Q ss_pred CCcCCCC--------CCCccccccCccccCCCCCCcc------hhHHHHHHHHHHHHhC----------CCCCCCCCCCC
Q 036334 495 PLFGNTT--------PPTRVAGYRAPEVVETRKVTFK------SDVYSFGVLLLELLTG----------KAPNQASLGEE 550 (654)
Q Consensus 495 ~~~~~~~--------~~~~~~~y~aPE~~~~~~~~~~------~DvwslGvil~el~tg----------~~pf~~~~~~~ 550 (654)
....... ...++..|+|||++.+..++.+ +|||||||++|||++| +.||.......
T Consensus 190 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~ 269 (337)
T 3mdy_A 190 VKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSD 269 (337)
T ss_dssp EECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCC
Confidence 7654321 3357788999999987766655 9999999999999999 55554432222
Q ss_pred CCChhHHHHHHhhhchhhhhhhHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCC
Q 036334 551 GIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGE 620 (654)
Q Consensus 551 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 620 (654)
. .. ............ .+.........+...++.+++.+||+.||++|||+.|+++.|+++.+..
T Consensus 270 ~-~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 333 (337)
T 3mdy_A 270 P-SY-EDMREIVCIKKL----RPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ 333 (337)
T ss_dssp C-CH-HHHHHHHTTSCC----CCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred C-ch-hhhHHHHhhhcc----CccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence 1 11 111111111111 1111111112356677889999999999999999999999999998654
No 45
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=4.4e-41 Score=366.37 Aligned_cols=249 Identities=27% Similarity=0.408 Sum_probs=201.7
Q ss_pred hhccccccCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCCCchh
Q 036334 350 SAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLS 429 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g~L~ 429 (654)
+.+.||+|+||.||+|.+.++..||||+++......+++.+|+++|++++||||+++++++.+ +..++||||+++|+|.
T Consensus 188 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~~gsL~ 266 (452)
T 1fmk_A 188 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLL 266 (452)
T ss_dssp EEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTCBHH
T ss_pred eeeeecCCCCeEEEEEEECCCceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhcCCCHH
Confidence 357899999999999999888889999998776677889999999999999999999999866 6789999999999999
Q ss_pred hhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCCC-----CCC
Q 036334 430 ALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTT-----PPT 504 (654)
Q Consensus 430 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~-----~~~ 504 (654)
+++.... ...+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++....... ...
T Consensus 267 ~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~ 342 (452)
T 1fmk_A 267 DFLKGET---GKYLRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAK 342 (452)
T ss_dssp HHHSHHH---HTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCCTTC--------------
T ss_pred HHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChhhEEECCCCCEEECCCccceecCCCceecccCCc
Confidence 9997431 235899999999999999999999998 9999999999999999999999999998764321 223
Q ss_pred ccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccCChHH
Q 036334 505 RVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEE 583 (654)
Q Consensus 505 ~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 583 (654)
++..|+|||++.+..++.++|||||||++|||++ |+.||..... ......+. .+.. ......
T Consensus 343 ~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~------~~~~~~i~-~~~~----------~~~~~~ 405 (452)
T 1fmk_A 343 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN------REVLDQVE-RGYR----------MPCPPE 405 (452)
T ss_dssp CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH------HHHHHHHH-TTCC----------CCCCTT
T ss_pred ccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCH------HHHHHHHH-cCCC----------CCCCCC
Confidence 4567999999998899999999999999999999 9999975321 11121111 1110 011122
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCC
Q 036334 584 EMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGE 620 (654)
Q Consensus 584 ~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 620 (654)
....+.+++.+||+.||++|||++++++.|+++....
T Consensus 406 ~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~ 442 (452)
T 1fmk_A 406 CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 442 (452)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccC
Confidence 3346778888999999999999999999999987553
No 46
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=7.2e-41 Score=353.23 Aligned_cols=242 Identities=21% Similarity=0.346 Sum_probs=197.5
Q ss_pred hhccccccCceeEEEEEec-CCcEEEEEEeccccc-------CHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEE
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAV-------GKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYD 421 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~-------~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 421 (654)
+.+.||+|+||.||+|... +|+.||+|+++.... ..+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 16 ~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~e 95 (361)
T 2yab_A 16 IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILE 95 (361)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred EeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEEEEE
Confidence 4578999999999999965 589999999976532 24678999999999999999999999999999999999
Q ss_pred ecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCC----CeEEeccCCCCCc
Q 036334 422 YMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDH----DACVSDFGLNPLF 497 (654)
Q Consensus 422 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~----~~kl~Dfgla~~~ 497 (654)
|+++|+|.+++.. ...+++..++.++.||+.||+|||+.+ |+||||||+|||++.++ .+||+|||++...
T Consensus 96 ~~~gg~L~~~l~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~ 169 (361)
T 2yab_A 96 LVSGGELFDFLAQ-----KESLSEEEATSFIKQILDGVNYLHTKK-IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169 (361)
T ss_dssp CCCSCBHHHHHTT-----CSCCBHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESCTTSSSCCEEECCCSSCEEC
T ss_pred cCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEeCCCCCccCEEEEecCCceEc
Confidence 9999999999963 346999999999999999999999998 99999999999998877 7999999999876
Q ss_pred CCC---CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHh
Q 036334 498 GNT---TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVE 574 (654)
Q Consensus 498 ~~~---~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 574 (654)
... ....+++.|+|||++.+..++.++|||||||++|||++|..||..... ...+..+....+. ++..
T Consensus 170 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~------~~~~~~i~~~~~~---~~~~ 240 (361)
T 2yab_A 170 EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK------QETLANITAVSYD---FDEE 240 (361)
T ss_dssp CTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH------HHHHHHHHTTCCC---CCHH
T ss_pred CCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHhcCCC---CCch
Confidence 543 345678889999999999999999999999999999999999975321 2222222221110 0111
Q ss_pred hhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 036334 575 LMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVR 611 (654)
Q Consensus 575 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 611 (654)
. +... ...+.+++.+||..||++|||+.|+++
T Consensus 241 ~--~~~~---s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 241 F--FSQT---SELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp H--HTTS---CHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred h--ccCC---CHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0 1111 234667788999999999999999974
No 47
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2e-41 Score=355.32 Aligned_cols=239 Identities=19% Similarity=0.310 Sum_probs=191.0
Q ss_pred hhccccccCceeEEEEEe-cCCcEEEEEEecccc--cCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCCC
Q 036334 350 SAEVLGKGSVGTSYKAVL-EEGTTVVVKRLKEVA--VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAG 426 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~-~~g~~vavK~~~~~~--~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g 426 (654)
+.+.||+|+||+||+|.. .+|+.||||++.... .....+.+|++++++++||||+++++++.+.+..++||||+++|
T Consensus 14 i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg 93 (347)
T 3zgw_A 14 LHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGG 93 (347)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred EEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEeCCCCC
Confidence 457899999999999995 468999999987653 23457889999999999999999999999999999999999999
Q ss_pred chhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC-----C
Q 036334 427 SLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT-----T 501 (654)
Q Consensus 427 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~-----~ 501 (654)
+|.+++... ..+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++...... .
T Consensus 94 ~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~ 167 (347)
T 3zgw_A 94 ELFDYIISQ-----DRLSEEETRVVFRQIVSAVAYVHSQG-YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQ 167 (347)
T ss_dssp BHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBC----------
T ss_pred CHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCccHHHEEEcCCCCEEEEeccCcccccCCCCcccc
Confidence 999999642 35999999999999999999999998 999999999999999999999999998765432 2
Q ss_pred CCCccccccCccccCCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccCC
Q 036334 502 PPTRVAGYRAPEVVETRKV-TFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHN 580 (654)
Q Consensus 502 ~~~~~~~y~aPE~~~~~~~-~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 580 (654)
...+++.|+|||++.+..+ +.++||||+||++|||++|..||.... .......+...... ..
T Consensus 168 ~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~------~~~~~~~i~~~~~~---------~p-- 230 (347)
T 3zgw_A 168 TCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDN------VMALYKKIMRGKYD---------VP-- 230 (347)
T ss_dssp ----CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHTCCC---------CC--
T ss_pred ccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHHcCCCC---------CC--
Confidence 3456788999999988775 899999999999999999999997532 22222222222110 01
Q ss_pred hHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 036334 581 IEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRM 612 (654)
Q Consensus 581 ~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 612 (654)
.....++.+++.+||+.||++|||++|+++.
T Consensus 231 -~~~s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 231 -KWLSPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp -TTCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred -CCCCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 1112345678889999999999999999875
No 48
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.2e-41 Score=349.76 Aligned_cols=256 Identities=24% Similarity=0.421 Sum_probs=197.9
Q ss_pred hhccccccCceeEEEEEe-----cCCcEEEEEEecccc-cCHHHHHHHHHHHhccCCCccccccEEEEeC--CceEEEEE
Q 036334 350 SAEVLGKGSVGTSYKAVL-----EEGTTVVVKRLKEVA-VGKREFEMQMEVLGKIKHDNVVPLRAFYYSK--DEKLLVYD 421 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~-----~~g~~vavK~~~~~~-~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~--~~~~lv~e 421 (654)
+.+.||+|+||+||+|.+ .+++.||||+++... ...+.+.+|++++++++||||+++++++... ...++|||
T Consensus 14 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 93 (295)
T 3ugc_A 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIME 93 (295)
T ss_dssp EEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEEEEE
T ss_pred hhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEEEEE
Confidence 457899999999999984 358899999997653 2346788999999999999999999998653 45899999
Q ss_pred ecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC-
Q 036334 422 YMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT- 500 (654)
Q Consensus 422 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~- 500 (654)
|+++|+|.+++... ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++......
T Consensus 94 ~~~~~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 168 (295)
T 3ugc_A 94 YLPYGSLRDYLQKH----KERIDHIKLLQYTSQICKGMEYLGTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 168 (295)
T ss_dssp CCTTCBHHHHHHHC----GGGCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCCCSCC------
T ss_pred eCCCCCHHHHHHhc----ccccCHHHHHHHHHHHHHHHHHHhcCC-cccCCCCHhhEEEcCCCeEEEccCcccccccCCc
Confidence 99999999999753 234899999999999999999999998 999999999999999999999999999876432
Q ss_pred ------CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCC-------CCCC--hhHHHHHHhhhc
Q 036334 501 ------TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGE-------EGID--LPRWVQSVVREE 565 (654)
Q Consensus 501 ------~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~-------~~~~--~~~~~~~~~~~~ 565 (654)
....++..|+|||++.+..++.++||||||+++|||++|..||...... .... ....+.......
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (295)
T 3ugc_A 169 EFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 248 (295)
T ss_dssp -------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTT
T ss_pred ceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhcc
Confidence 1233455699999999999999999999999999999999998642110 0000 000000000000
Q ss_pred hhhhhhhHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCC
Q 036334 566 WTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGE 620 (654)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 620 (654)
. ..........++.+++.+||+.||++|||++|+++.|+++.+.-
T Consensus 249 ~----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l 293 (295)
T 3ugc_A 249 G----------RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293 (295)
T ss_dssp C----------CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred C----------cCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence 0 11112233456778888999999999999999999999998653
No 49
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=6.2e-41 Score=338.89 Aligned_cols=248 Identities=25% Similarity=0.399 Sum_probs=206.9
Q ss_pred hhccccccCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCCCchh
Q 036334 350 SAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLS 429 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g~L~ 429 (654)
..+.||+|+||.||+|...+++.||+|+++......+++.+|++++++++||||+++++++.+++..++||||+++++|.
T Consensus 12 ~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 91 (267)
T 3t9t_A 12 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLS 91 (267)
T ss_dssp EEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTCBHH
T ss_pred eeeEecCCCceeEEEEEecCCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCCcHH
Confidence 35789999999999999888899999999887777788999999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC-----CCCC
Q 036334 430 ALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT-----TPPT 504 (654)
Q Consensus 430 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~-----~~~~ 504 (654)
+++... ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++...... ....
T Consensus 92 ~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 166 (267)
T 3t9t_A 92 DYLRTQ----RGLFAAETLLGMCLDVCEGMAYLEEAC-VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK 166 (267)
T ss_dssp HHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTT
T ss_pred HHHhhC----cccCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCchheEEECCCCCEEEccccccccccccccccccccc
Confidence 999743 245899999999999999999999998 999999999999999999999999998765432 2334
Q ss_pred ccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccCChHH
Q 036334 505 RVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEE 583 (654)
Q Consensus 505 ~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 583 (654)
++..|+|||++.+..++.++||||||+++|||++ |+.||..... ......+... .. ......
T Consensus 167 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~------~~~~~~i~~~-~~----------~~~~~~ 229 (267)
T 3t9t_A 167 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN------SEVVEDISTG-FR----------LYKPRL 229 (267)
T ss_dssp CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH------HHHHHHHHTT-CC----------CCCCTT
T ss_pred ccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCH------HHHHHHHhcC-Cc----------CCCCcc
Confidence 5567999999988899999999999999999999 8999875321 1112221111 00 000111
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcC
Q 036334 584 EMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRG 619 (654)
Q Consensus 584 ~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 619 (654)
....+.+++.+||+.||++|||++++++.|+++.++
T Consensus 230 ~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 230 ASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 233577788899999999999999999999999764
No 50
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=4.5e-41 Score=356.15 Aligned_cols=273 Identities=16% Similarity=0.161 Sum_probs=199.3
Q ss_pred hhccccccCceeEEEEEecC------CcEEEEEEeccccc------------CHHHHHHHHHHHhccCCCccccccEEEE
Q 036334 350 SAEVLGKGSVGTSYKAVLEE------GTTVVVKRLKEVAV------------GKREFEMQMEVLGKIKHDNVVPLRAFYY 411 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~~------g~~vavK~~~~~~~------------~~~~~~~e~~~l~~l~hpniv~l~~~~~ 411 (654)
+.+.||+|+||.||+|.+.. ++.||||++..... ....+..|+..++.++||||+++++++.
T Consensus 39 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~ 118 (364)
T 3op5_A 39 VGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGL 118 (364)
T ss_dssp EEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEEEE
T ss_pred EEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEeeee
Confidence 35789999999999998754 47899999865421 1122334555677788999999999987
Q ss_pred eC----CceEEEEEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEEC--CCCC
Q 036334 412 SK----DEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLR--PDHD 485 (654)
Q Consensus 412 ~~----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~--~~~~ 485 (654)
.. ...++||||+ +++|.+++... ...+++..++.++.|++.||+|||+++ |+||||||+|||++ .++.
T Consensus 119 ~~~~~~~~~~lv~e~~-g~~L~~~~~~~----~~~l~~~~~~~i~~qi~~~l~~lH~~~-iiHrDlkp~Nill~~~~~~~ 192 (364)
T 3op5_A 119 HDKNGKSYRFMIMDRF-GSDLQKIYEAN----AKRFSRKTVLQLSLRILDILEYIHEHE-YVHGDIKASNLLLNYKNPDQ 192 (364)
T ss_dssp EEETTEEEEEEEEECE-EEEHHHHHHHT----TSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEESSCTTC
T ss_pred eccCCcceEEEEEeCC-CCCHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEEecCCHHHEEEecCCCCe
Confidence 65 3479999999 99999999743 245999999999999999999999998 99999999999999 8899
Q ss_pred eEEeccCCCCCcCCC-----------CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCh
Q 036334 486 ACVSDFGLNPLFGNT-----------TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDL 554 (654)
Q Consensus 486 ~kl~Dfgla~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~ 554 (654)
+||+|||++..+... ....+|..|+|||++.+..++.++|||||||++|||++|+.||....... ..
T Consensus 193 ~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~--~~ 270 (364)
T 3op5_A 193 VYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDP--KY 270 (364)
T ss_dssp EEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH--HH
T ss_pred EEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCH--HH
Confidence 999999999655321 12337888999999999999999999999999999999999998533221 11
Q ss_pred hHHHHHHhhhchhhhhhhHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCCCCCCCCCCCCCCCC
Q 036334 555 PRWVQSVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGETDDGLRQSSDDPSK 634 (654)
Q Consensus 555 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~~~~~~ 634 (654)
.......... .....++..+. ......++.+++..||+.||++||++.++++.|+++...... ......++...
T Consensus 271 ~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~-~~~~~~dw~~~ 344 (364)
T 3op5_A 271 VRDSKIRYRE-NIASLMDKCFP----AANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGS-KDDGKLDLSVV 344 (364)
T ss_dssp HHHHHHHHHH-CHHHHHHHHSC----TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTC-CCCCCCCC---
T ss_pred HHHHHHHhhh-hHHHHHHHhcc----cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCC-CcCCccceEec
Confidence 1111111111 11122222110 011234677788899999999999999999999998765432 23344455543
Q ss_pred CC
Q 036334 635 GS 636 (654)
Q Consensus 635 ~~ 636 (654)
..
T Consensus 345 ~~ 346 (364)
T 3op5_A 345 EN 346 (364)
T ss_dssp --
T ss_pred cC
Confidence 33
No 51
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4e-41 Score=350.08 Aligned_cols=244 Identities=20% Similarity=0.312 Sum_probs=199.6
Q ss_pred hhccccccCceeEEEEEec-CCcEEEEEEecccccCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCCCch
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSL 428 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g~L 428 (654)
+.+.||+|+||.||+|... +++.||+|.++........+.+|+.+++.++||||+++++++.+.+..++||||+++|+|
T Consensus 9 ~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L 88 (321)
T 1tki_A 9 IAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDI 88 (321)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCCBH
T ss_pred eeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCCCCCH
Confidence 3578999999999999965 588999999986655567788999999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECC--CCCeEEeccCCCCCcCCCC---CC
Q 036334 429 SALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRP--DHDACVSDFGLNPLFGNTT---PP 503 (654)
Q Consensus 429 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~--~~~~kl~Dfgla~~~~~~~---~~ 503 (654)
.+++... ...+++..++.++.|++.||+|||+++ |+||||||+|||++. ++.+||+|||++....... ..
T Consensus 89 ~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH~~g-ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~ 163 (321)
T 1tki_A 89 FERINTS----AFELNEREIVSYVHQVCEALQFLHSHN-IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLL 163 (321)
T ss_dssp HHHHTSS----SCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEEEE
T ss_pred HHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCC-CCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCccccc
Confidence 9999743 245899999999999999999999998 999999999999997 7899999999998765432 23
Q ss_pred CccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccCChHH
Q 036334 504 TRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEE 583 (654)
Q Consensus 504 ~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 583 (654)
.+++.|+|||++.+..++.++|||||||++|||++|..||..... ...+..+....... +.. .+. .
T Consensus 164 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~~~~~i~~~~~~~---~~~--~~~---~ 229 (321)
T 1tki_A 164 FTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN------QQIIENIMNAEYTF---DEE--AFK---E 229 (321)
T ss_dssp ESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHHTCCCC---CHH--HHT---T
T ss_pred cCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCH------HHHHHHHHcCCCCC---Chh--hhc---c
Confidence 467789999999988899999999999999999999999975321 22222222221110 000 001 1
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 036334 584 EMVQLLQIAMGCVSTVPDQRPAMQEVVRM 612 (654)
Q Consensus 584 ~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 612 (654)
...++.+++.+||..||++|||+.|+++.
T Consensus 230 ~s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 230 ISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp SCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 12356778889999999999999999874
No 52
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=8.4e-41 Score=343.34 Aligned_cols=253 Identities=21% Similarity=0.311 Sum_probs=200.8
Q ss_pred hhccccccCceeEEEEEec-CCcEEEEEEeccccc----CHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecC
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAV----GKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMP 424 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~----~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~ 424 (654)
+.+.||+|+||.||+|... +++.||+|++..... ..+.+.+|+.++++++||||+++++++.+++..++||||++
T Consensus 15 i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~ 94 (294)
T 4eqm_A 15 IVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIE 94 (294)
T ss_dssp EEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEeCCC
Confidence 3578999999999999954 588999999864422 23568899999999999999999999999999999999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC----
Q 036334 425 AGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT---- 500 (654)
Q Consensus 425 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~---- 500 (654)
+|+|.+++.. ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++......
T Consensus 95 g~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 168 (294)
T 4eqm_A 95 GPTLSEYIES-----HGPLSVDTAINFTNQILDGIKHAHDMR-IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ 168 (294)
T ss_dssp SCBHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCSSSTTC-------
T ss_pred CCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEEeCCCccccccccccc
Confidence 9999999974 245899999999999999999999998 999999999999999999999999999876433
Q ss_pred -CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccC
Q 036334 501 -TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYH 579 (654)
Q Consensus 501 -~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 579 (654)
....+++.|+|||++.+..++.++||||||+++|||++|+.||..... ............. .......
T Consensus 169 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~------~~~~~~~~~~~~~----~~~~~~~- 237 (294)
T 4eqm_A 169 TNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETA------VSIAIKHIQDSVP----NVTTDVR- 237 (294)
T ss_dssp ------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCH------HHHHHHHHSSCCC----CHHHHSC-
T ss_pred cCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh------HHHHHHHhhccCC----Ccchhcc-
Confidence 223467889999999999999999999999999999999999975321 1111111111110 0000000
Q ss_pred ChHHHHHHHHHHHhhccCCCCCCCC-CHHHHHHHHHhhhcCCC
Q 036334 580 NIEEEMVQLLQIAMGCVSTVPDQRP-AMQEVVRMIENMNRGET 621 (654)
Q Consensus 580 ~~~~~~~~l~~l~~~cl~~dP~~RP-s~~evl~~L~~~~~~~~ 621 (654)
......+.+++.+||+.||++|| +++++.+.|+++.....
T Consensus 238 --~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~ 278 (294)
T 4eqm_A 238 --KDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENR 278 (294)
T ss_dssp --TTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSS
T ss_pred --cCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhcc
Confidence 11224577788899999999999 99999999999876543
No 53
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.9e-41 Score=357.85 Aligned_cols=252 Identities=24% Similarity=0.333 Sum_probs=201.2
Q ss_pred hhccccccCceeEEEEEec------CCcEEEEEEecccc--cCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEE
Q 036334 350 SAEVLGKGSVGTSYKAVLE------EGTTVVVKRLKEVA--VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYD 421 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~------~g~~vavK~~~~~~--~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 421 (654)
+.+.||+|+||+||+|.+. ++..||||+++... ....++.+|+.++++++||||+++++++.+....++|||
T Consensus 75 ~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 154 (367)
T 3l9p_A 75 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLE 154 (367)
T ss_dssp EEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred EeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCEEEEE
Confidence 3578999999999999843 36789999997543 234568899999999999999999999999999999999
Q ss_pred ecCCCchhhhhccCCC--CCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCC---CeEEeccCCCCC
Q 036334 422 YMPAGSLSALLHGSRG--SGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDH---DACVSDFGLNPL 496 (654)
Q Consensus 422 ~~~~g~L~~~l~~~~~--~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~---~~kl~Dfgla~~ 496 (654)
|+++|+|.+++...+. .....+++..++.++.|++.||+|||+++ |+||||||+|||++.++ .+||+|||++..
T Consensus 155 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~ 233 (367)
T 3l9p_A 155 LMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH-FIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 233 (367)
T ss_dssp CCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESCSSTTCCEEECCCHHHHH
T ss_pred eCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChhhEEEecCCCCceEEECCCccccc
Confidence 9999999999975432 12345999999999999999999999998 99999999999999655 499999999864
Q ss_pred cC------CCCCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhchhhh
Q 036334 497 FG------NTTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAE 569 (654)
Q Consensus 497 ~~------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 569 (654)
.. ......++..|+|||++.+..++.++|||||||++|||++ |..||..... ......+.....
T Consensus 234 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~------~~~~~~i~~~~~--- 304 (367)
T 3l9p_A 234 IYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN------QEVLEFVTSGGR--- 304 (367)
T ss_dssp HHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH------HHHHHHHHTTCC---
T ss_pred cccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH------HHHHHHHHcCCC---
Confidence 31 1222345678999999998999999999999999999998 9999975321 111222111110
Q ss_pred hhhHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcC
Q 036334 570 VFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRG 619 (654)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 619 (654)
..........+.+++.+||+.||++|||+.+|++.|+.+.+.
T Consensus 305 --------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~ 346 (367)
T 3l9p_A 305 --------MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 346 (367)
T ss_dssp --------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred --------CCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhC
Confidence 011112234577888899999999999999999999998765
No 54
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=3.5e-40 Score=342.79 Aligned_cols=263 Identities=20% Similarity=0.285 Sum_probs=205.2
Q ss_pred hhccccccCceeEEEEEec-CCcEEEEEEecccc--cCHHHHHHHHHHHhccCCCccccccEEEEeCC--ceEEEEEecC
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVA--VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKD--EKLLVYDYMP 424 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~--~~~lv~e~~~ 424 (654)
+.++||+|+||+||+|... +|+.||||+++... ...+.+.+|++++++++||||+++++++.... ..++||||++
T Consensus 13 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~ 92 (319)
T 4euu_A 13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCP 92 (319)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEECCT
T ss_pred EEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeCCC
Confidence 3578999999999999966 48999999997643 34567889999999999999999999998765 6799999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEE----CCCCCeEEeccCCCCCcCCC
Q 036334 425 AGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILL----RPDHDACVSDFGLNPLFGNT 500 (654)
Q Consensus 425 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll----~~~~~~kl~Dfgla~~~~~~ 500 (654)
+|+|.+++.... ....+++..++.++.|++.||+|||+++ |+||||||+|||+ +.++.+||+|||++......
T Consensus 93 ~~~L~~~l~~~~--~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~ 169 (319)
T 4euu_A 93 CGSLYTVLEEPS--NAYGLPESEFLIVLRDVVGGMNHLRENG-IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD 169 (319)
T ss_dssp TCBHHHHHHSGG--GTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTT
T ss_pred CCCHHHHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHEEEeccCCCCceEEEccCCCceecCCC
Confidence 999999998543 2234899999999999999999999998 9999999999999 77788999999999876543
Q ss_pred C---CCCccccccCccccC--------CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhh-
Q 036334 501 T---PPTRVAGYRAPEVVE--------TRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTA- 568 (654)
Q Consensus 501 ~---~~~~~~~y~aPE~~~--------~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~- 568 (654)
. ...++..|+|||++. +..++.++|||||||++|||++|+.||....... .....+..+.......
T Consensus 170 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~--~~~~~~~~~~~~~p~~~ 247 (319)
T 4euu_A 170 EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPR--RNKEVMYKIITGKPSGA 247 (319)
T ss_dssp CCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGG--GCHHHHHHHHHHCCTTC
T ss_pred CceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccc--hhHHHHHHHhcCCCccc
Confidence 2 345778899999885 5788999999999999999999999997543322 1122222222211100
Q ss_pred --hh-------h--hHhhh-ccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhh
Q 036334 569 --EV-------F--DVELM-RYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMN 617 (654)
Q Consensus 569 --~~-------~--~~~~~-~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 617 (654)
.. + ...+. ...........+.+++.+||+.||++|||++|+++...+..
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 248 ISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp CEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred chhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence 00 0 00000 11223455667888999999999999999999999988654
No 55
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=5.7e-41 Score=352.20 Aligned_cols=253 Identities=24% Similarity=0.362 Sum_probs=202.1
Q ss_pred hhccccccCceeEEEEEec------CCcEEEEEEeccccc--CHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEE
Q 036334 350 SAEVLGKGSVGTSYKAVLE------EGTTVVVKRLKEVAV--GKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYD 421 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~------~g~~vavK~~~~~~~--~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 421 (654)
+.+.||+|+||.||+|... +++.||||+++.... ..+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 51 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 130 (343)
T 1luf_A 51 YVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFE 130 (343)
T ss_dssp EEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceEEEEe
Confidence 4578999999999999964 347899999976532 24678999999999999999999999999999999999
Q ss_pred ecCCCchhhhhccCCCC-------------------CCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECC
Q 036334 422 YMPAGSLSALLHGSRGS-------------------GRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRP 482 (654)
Q Consensus 422 ~~~~g~L~~~l~~~~~~-------------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~ 482 (654)
|+++|+|.+++...... ....+++.+++.++.|++.||+|||+++ |+||||||+||+++.
T Consensus 131 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~NIl~~~ 209 (343)
T 1luf_A 131 YMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK-FVHRDLATRNCLVGE 209 (343)
T ss_dssp CCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECG
T ss_pred cCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCcceEEECC
Confidence 99999999999754211 1256999999999999999999999998 999999999999999
Q ss_pred CCCeEEeccCCCCCcCC------CCCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCCChh
Q 036334 483 DHDACVSDFGLNPLFGN------TTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLP 555 (654)
Q Consensus 483 ~~~~kl~Dfgla~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~pf~~~~~~~~~~~~ 555 (654)
++.+||+|||++..... .....++..|+|||++.+..++.++|||||||++|||++ |..||..... .
T Consensus 210 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~------~ 283 (343)
T 1luf_A 210 NMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAH------E 283 (343)
T ss_dssp GGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH------H
T ss_pred CCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCCh------H
Confidence 99999999999865432 223455677999999998899999999999999999999 9999975321 1
Q ss_pred HHHHHHhhhchhhhhhhHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCC
Q 036334 556 RWVQSVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGE 620 (654)
Q Consensus 556 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 620 (654)
.....+.... .. .........+.+++.+||+.||++|||+.++++.|+++.+..
T Consensus 284 ~~~~~~~~~~-~~----------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~ 337 (343)
T 1luf_A 284 EVIYYVRDGN-IL----------ACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA 337 (343)
T ss_dssp HHHHHHHTTC-CC----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred HHHHHHhCCC-cC----------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence 1111111111 00 011122346778888999999999999999999999987654
No 56
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=6.2e-41 Score=339.79 Aligned_cols=243 Identities=26% Similarity=0.424 Sum_probs=188.2
Q ss_pred hccccccCceeEEEEEecCCcEEEEEEeccccc-----CHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCC
Q 036334 351 AEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAV-----GKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPA 425 (654)
Q Consensus 351 ~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~-----~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~ 425 (654)
.+.||+|+||.||+|.+. |+.||||+++.... ..+.+.+|+++++.++||||+++++++.+++..++||||+++
T Consensus 12 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 90 (271)
T 3dtc_A 12 EEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARG 90 (271)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEECCTT
T ss_pred eeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEEcCCC
Confidence 478999999999999976 89999999875422 246788999999999999999999999999999999999999
Q ss_pred CchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccC--CeecCCCCCCcEEECC--------CCCeEEeccCCCC
Q 036334 426 GSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSG--KIVHGNIKASNILLRP--------DHDACVSDFGLNP 495 (654)
Q Consensus 426 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~--~ivHrDlk~~NIll~~--------~~~~kl~Dfgla~ 495 (654)
++|.+++.. ..+++..++.++.|++.||+|||+++ +|+||||||+||+++. ++.+||+|||++.
T Consensus 91 ~~L~~~~~~------~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~ 164 (271)
T 3dtc_A 91 GPLNRVLSG------KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR 164 (271)
T ss_dssp EEHHHHHTS------SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC--
T ss_pred CCHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCccc
Confidence 999999862 35899999999999999999999886 3889999999999986 6789999999998
Q ss_pred CcCCC--CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhH
Q 036334 496 LFGNT--TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDV 573 (654)
Q Consensus 496 ~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 573 (654)
..... ....++..|+|||.+.+..++.++||||||+++|||++|+.||..... .............
T Consensus 165 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~------~~~~~~~~~~~~~------ 232 (271)
T 3dtc_A 165 EWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDG------LAVAYGVAMNKLA------ 232 (271)
T ss_dssp -----------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCH------HHHHHHHHTSCCC------
T ss_pred ccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHhhhcCCCC------
Confidence 66433 234677889999999988999999999999999999999999975321 1111111111110
Q ss_pred hhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 036334 574 ELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616 (654)
Q Consensus 574 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 616 (654)
..........+.+++.+||+.||++|||+.|++++|+++
T Consensus 233 ----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 233 ----LPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp ----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred ----CCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 011112234577888899999999999999999999864
No 57
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=1e-40 Score=345.60 Aligned_cols=252 Identities=25% Similarity=0.357 Sum_probs=193.4
Q ss_pred hccccccCceeEEEEEecCCcEEEEEEecccccC---HHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCCCc
Q 036334 351 AEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVG---KREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGS 427 (654)
Q Consensus 351 ~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~---~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g~ 427 (654)
.+.||+|+||+||+|...+|+.||+|+++..... ...+.+|++++++++||||+++++++.+++..++||||+++ +
T Consensus 26 ~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~-~ 104 (311)
T 3niz_A 26 LEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-D 104 (311)
T ss_dssp EEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECCSE-E
T ss_pred hhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCCCC-C
Confidence 4789999999999999988999999999754322 35688999999999999999999999999999999999975 8
Q ss_pred hhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC----CCC
Q 036334 428 LSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT----TPP 503 (654)
Q Consensus 428 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~----~~~ 503 (654)
|.+++... ...+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++...... ...
T Consensus 105 l~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 179 (311)
T 3niz_A 105 LKKVLDEN----KTGLQDSQIKIYLYQLLRGVAHCHQHR-ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHE 179 (311)
T ss_dssp HHHHHHTC----TTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC---CC
T ss_pred HHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCchHhEEECCCCCEEEccCcCceecCCCcccccCC
Confidence 88887643 345899999999999999999999998 999999999999999999999999999766432 234
Q ss_pred CccccccCccccCC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhh---hhhHh-----
Q 036334 504 TRVAGYRAPEVVET-RKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAE---VFDVE----- 574 (654)
Q Consensus 504 ~~~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~----- 574 (654)
.++..|+|||++.+ ..++.++||||+||++|||++|+.||......+ ....+........... ..+..
T Consensus 180 ~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 256 (311)
T 3niz_A 180 VVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD---QLPKIFSILGTPNPREWPQVQELPLWKQR 256 (311)
T ss_dssp CCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTT---HHHHHHHHHCCCCTTTSGGGTTSHHHHSC
T ss_pred cccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHH---HHHHHHHHHCCCChHHhhhhhccchhhhc
Confidence 56788999999876 568999999999999999999999997654332 1122222111100000 00000
Q ss_pred -hhc--cCC----hHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 036334 575 -LMR--YHN----IEEEMVQLLQIAMGCVSTVPDQRPAMQEVVR 611 (654)
Q Consensus 575 -~~~--~~~----~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 611 (654)
... ... ......++.+++.+||+.||++|||++|+++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 257 TFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp CCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred ccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 000 000 0112245678888999999999999999986
No 58
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=1.7e-40 Score=347.12 Aligned_cols=239 Identities=22% Similarity=0.259 Sum_probs=196.4
Q ss_pred hhccccccCceeEEEEEec-CCcEEEEEEeccc----ccCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecC
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEV----AVGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMP 424 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~----~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~ 424 (654)
..+.||+|+||+||+|... +|+.||+|++++. ......+.+|+.+++.++||||+++++++.+.+..++||||++
T Consensus 9 ~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~~~ 88 (337)
T 1o6l_A 9 YLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYAN 88 (337)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEeCCC
Confidence 3578999999999999965 5899999999764 2345678899999999999999999999999999999999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC----
Q 036334 425 AGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT---- 500 (654)
Q Consensus 425 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~---- 500 (654)
+|+|.+++... ..+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 89 gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 162 (337)
T 1o6l_A 89 GGELFFHLSRE-----RVFTEERARFYGAEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM 162 (337)
T ss_dssp TCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCB
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC-eecCcCCHHHEEECCCCCEEEeeccchhhcccCCCcc
Confidence 99999999742 45899999999999999999999998 999999999999999999999999999764322
Q ss_pred CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccCC
Q 036334 501 TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHN 580 (654)
Q Consensus 501 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 580 (654)
....+|+.|+|||++.+..++.++|||||||++|||++|+.||.... .......+...... ..
T Consensus 163 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~------~~~~~~~i~~~~~~---------~p-- 225 (337)
T 1o6l_A 163 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD------HERLFELILMEEIR---------FP-- 225 (337)
T ss_dssp CCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHCCCC---------CC--
T ss_pred cccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCC------HHHHHHHHHcCCCC---------CC--
Confidence 33457888999999999999999999999999999999999997532 12222222221110 01
Q ss_pred hHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHHH
Q 036334 581 IEEEMVQLLQIAMGCVSTVPDQRP-----AMQEVVRM 612 (654)
Q Consensus 581 ~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~ 612 (654)
.....++.+++.+||+.||++|| +++|+++.
T Consensus 226 -~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 226 -RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp -TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred -CCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 11223566778899999999999 89998764
No 59
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.4e-40 Score=345.09 Aligned_cols=244 Identities=22% Similarity=0.345 Sum_probs=198.1
Q ss_pred HHhhccccccCceeEEEEEec-CCcEEEEEEeccccc-------CHHHHHHHHHHHhccCCCccccccEEEEeCCceEEE
Q 036334 348 RASAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAV-------GKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLV 419 (654)
Q Consensus 348 ~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~-------~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv 419 (654)
|.+.+.||+|+||.||+|... +|+.||+|+++.... ..+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 13 y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 92 (326)
T 2y0a_A 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILI 92 (326)
T ss_dssp EEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred eEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 345688999999999999965 589999999975422 356789999999999999999999999999999999
Q ss_pred EEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCC----CeEEeccCCCC
Q 036334 420 YDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDH----DACVSDFGLNP 495 (654)
Q Consensus 420 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~----~~kl~Dfgla~ 495 (654)
|||+++|+|.+++.. ...+++..++.++.|++.||+|||+.+ |+||||||+||+++.++ .+||+|||++.
T Consensus 93 ~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~ 166 (326)
T 2y0a_A 93 LELVAGGELFDFLAE-----KESLTEEEATEFLKQILNGVYYLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166 (326)
T ss_dssp EECCCSCBHHHHHTT-----SSCCBHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEcCCCCCHHHHHHh-----cCCcCHHHHHHHHHHHHHHHHHHHHCC-eEcCCCCHHHEEEecCCCCCCCEEEEECCCCe
Confidence 999999999999973 346999999999999999999999998 99999999999999887 79999999997
Q ss_pred CcCCC---CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhh
Q 036334 496 LFGNT---TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFD 572 (654)
Q Consensus 496 ~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 572 (654)
..... ....+++.|+|||++.+..++.++|||||||++|||++|+.||..... ......+...... +.
T Consensus 167 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~~~~~~~~~~~~---~~ 237 (326)
T 2y0a_A 167 KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK------QETLANVSAVNYE---FE 237 (326)
T ss_dssp ECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH------HHHHHHHHHTCCC---CC
T ss_pred ECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH------HHHHHHHHhcCCC---cC
Confidence 76432 334678889999999989999999999999999999999999965321 1112221111100 00
Q ss_pred HhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 036334 573 VELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVR 611 (654)
Q Consensus 573 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 611 (654)
... .. .....+.+++.+||+.||++|||++|+++
T Consensus 238 ~~~--~~---~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 238 DEY--FS---NTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp HHH--HT---TSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred ccc--cc---cCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 000 01 11235667888999999999999999986
No 60
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=9.3e-41 Score=371.09 Aligned_cols=250 Identities=27% Similarity=0.409 Sum_probs=206.1
Q ss_pred hhccccccCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCCCchh
Q 036334 350 SAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLS 429 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g~L~ 429 (654)
+.+.||+|+||.||+|.+.++..||||+++......++|.+|+++|++++||||+++++++.+ +..++||||+++|+|.
T Consensus 271 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~gsL~ 349 (535)
T 2h8h_A 271 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLL 349 (535)
T ss_dssp EEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTEEHH
T ss_pred hheecccCCCeEEEEEEECCCceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhcCCcHH
Confidence 457899999999999999888899999998776677889999999999999999999999866 6789999999999999
Q ss_pred hhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC-----CCCC
Q 036334 430 ALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT-----TPPT 504 (654)
Q Consensus 430 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~-----~~~~ 504 (654)
+++.... ...+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++...... ....
T Consensus 350 ~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~ 425 (535)
T 2h8h_A 350 DFLKGET---GKYLRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAK 425 (535)
T ss_dssp HHHSHHH---HTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTCSTT
T ss_pred HHHhhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecccCCc
Confidence 9997431 235899999999999999999999998 999999999999999999999999999876432 2234
Q ss_pred ccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccCChHH
Q 036334 505 RVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEE 583 (654)
Q Consensus 505 ~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 583 (654)
++..|+|||++.+..++.++|||||||++|||++ |+.||..... ...+..+ ..... ......
T Consensus 426 ~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~------~~~~~~i-~~~~~----------~~~~~~ 488 (535)
T 2h8h_A 426 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN------REVLDQV-ERGYR----------MPCPPE 488 (535)
T ss_dssp SCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCH------HHHHHHH-HTTCC----------CCCCTT
T ss_pred CcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH------HHHHHHH-HcCCC----------CCCCCC
Confidence 4567999999998899999999999999999999 8999975321 1112111 11110 011122
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCCC
Q 036334 584 EMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGET 621 (654)
Q Consensus 584 ~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 621 (654)
+...+.+++.+||+.||++|||+++|++.|+++.....
T Consensus 489 ~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~ 526 (535)
T 2h8h_A 489 CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 526 (535)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCCS
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhccC
Confidence 33467788889999999999999999999999875543
No 61
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=1.3e-40 Score=343.96 Aligned_cols=251 Identities=28% Similarity=0.436 Sum_probs=196.9
Q ss_pred hhccccccCceeEEEEEecCCcEEEEEEecccccC---HHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCCC
Q 036334 350 SAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVG---KREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAG 426 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~---~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g 426 (654)
+.+.||+|+||.||+|... ..+|+|+++..... .+.+.+|++++++++||||+++++++. .+..++||||+++|
T Consensus 40 ~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~~~~~ 116 (307)
T 3lb7_A 40 LSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQWCEGS 116 (307)
T ss_dssp EEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEECCSSC
T ss_pred EEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEecCCCC
Confidence 4578999999999999865 46899998764332 356889999999999999999999864 55689999999999
Q ss_pred chhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCC------C
Q 036334 427 SLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN------T 500 (654)
Q Consensus 427 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~------~ 500 (654)
+|.+++... ...+++.+++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++..... .
T Consensus 117 ~L~~~l~~~----~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~ 191 (307)
T 3lb7_A 117 SLYKHLHVQ----ETKFQMFQLIDIARQTAQGMDYLHAKN-IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQV 191 (307)
T ss_dssp BHHHHHHTS----CCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCSSSEEECTTSCEEECCCCSSCC----------
T ss_pred cHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHhCC-EeeCCCChhhEEEcCCCCEEEccCCCceecccccccccc
Confidence 999999743 346999999999999999999999998 99999999999999999999999999976532 1
Q ss_pred CCCCccccccCccccC---CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhc
Q 036334 501 TPPTRVAGYRAPEVVE---TRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMR 577 (654)
Q Consensus 501 ~~~~~~~~y~aPE~~~---~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 577 (654)
....++..|+|||++. +..++.++|||||||++|||++|+.||...... ..+..............
T Consensus 192 ~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~------~~~~~~~~~~~~~~~~~----- 260 (307)
T 3lb7_A 192 EQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR------DQIIFMVGRGYASPDLS----- 260 (307)
T ss_dssp --CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH------HHHHHHHHHTCCCCCST-----
T ss_pred cCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcH------HHHHHHHhcCCCCcchh-----
Confidence 2345778899999985 567899999999999999999999999753321 11111111111110000
Q ss_pred cCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCC
Q 036334 578 YHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGE 620 (654)
Q Consensus 578 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 620 (654)
.....+...+.+++.+||+.+|++||++.|+++.|+.++..-
T Consensus 261 -~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~ 302 (307)
T 3lb7_A 261 -KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp -TSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred -hhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhc
Confidence 001122346777888999999999999999999999998664
No 62
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=3.4e-41 Score=356.26 Aligned_cols=253 Identities=27% Similarity=0.373 Sum_probs=200.4
Q ss_pred hhccccccCceeEEEEEe------cCCcEEEEEEeccccc--CHHHHHHHHHHHhcc-CCCccccccEEEEeCCc-eEEE
Q 036334 350 SAEVLGKGSVGTSYKAVL------EEGTTVVVKRLKEVAV--GKREFEMQMEVLGKI-KHDNVVPLRAFYYSKDE-KLLV 419 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~------~~g~~vavK~~~~~~~--~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~~-~~lv 419 (654)
+.+.||+|+||.||+|.+ .+++.||||+++.... ..+.+.+|++++.++ +||||+++++++.+.+. .++|
T Consensus 26 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~~iv 105 (359)
T 3vhe_A 26 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 105 (359)
T ss_dssp EEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEE
T ss_pred eceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCceEEE
Confidence 457899999999999973 2357899999976532 235689999999999 79999999999987654 8999
Q ss_pred EEecCCCchhhhhccCCCCC------------------------------------------------------------
Q 036334 420 YDYMPAGSLSALLHGSRGSG------------------------------------------------------------ 439 (654)
Q Consensus 420 ~e~~~~g~L~~~l~~~~~~~------------------------------------------------------------ 439 (654)
|||+++|+|.+++.......
T Consensus 106 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (359)
T 3vhe_A 106 VEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDL 185 (359)
T ss_dssp EECCTTEEHHHHHHTTTTSBCSCC------------------------------------------------------CT
T ss_pred EEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcccccch
Confidence 99999999999997543210
Q ss_pred -CCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC------CCCCccccccCc
Q 036334 440 -RTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT------TPPTRVAGYRAP 512 (654)
Q Consensus 440 -~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~------~~~~~~~~y~aP 512 (654)
...+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++...... ....++..|+||
T Consensus 186 ~~~~l~~~~~~~~~~ql~~aL~~LH~~~-ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aP 264 (359)
T 3vhe_A 186 YKDFLTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP 264 (359)
T ss_dssp TTTCBCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCH
T ss_pred hccccCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCceeECh
Confidence 122899999999999999999999998 999999999999999999999999999865432 223456679999
Q ss_pred cccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccCChHHHHHHHHHH
Q 036334 513 EVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMVQLLQI 591 (654)
Q Consensus 513 E~~~~~~~~~~~DvwslGvil~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 591 (654)
|++.+..++.++|||||||++|||++ |+.||......+ .+.......... ........++.++
T Consensus 265 E~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~------~~~~~~~~~~~~----------~~~~~~~~~l~~l 328 (359)
T 3vhe_A 265 ETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE------EFCRRLKEGTRM----------RAPDYTTPEMYQT 328 (359)
T ss_dssp HHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH------HHHHHHHHTCCC----------CCCTTCCHHHHHH
T ss_pred hhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH------HHHHHHHcCCCC----------CCCCCCCHHHHHH
Confidence 99999999999999999999999998 999997543221 111111111110 0111122357788
Q ss_pred HhhccCCCCCCCCCHHHHHHHHHhhhcC
Q 036334 592 AMGCVSTVPDQRPAMQEVVRMIENMNRG 619 (654)
Q Consensus 592 ~~~cl~~dP~~RPs~~evl~~L~~~~~~ 619 (654)
+.+||+.||++|||++|++++|+++.+.
T Consensus 329 i~~~l~~dP~~Rps~~ell~~L~~~~~~ 356 (359)
T 3vhe_A 329 MLDCWHGEPSQRPTFSELVEHLGNLLQA 356 (359)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence 8899999999999999999999998753
No 63
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.1e-40 Score=343.07 Aligned_cols=239 Identities=22% Similarity=0.329 Sum_probs=187.7
Q ss_pred hhccccccCceeEEEEEec-CCcEEEEEEeccccc---------------------------CHHHHHHHHHHHhccCCC
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAV---------------------------GKREFEMQMEVLGKIKHD 401 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~---------------------------~~~~~~~e~~~l~~l~hp 401 (654)
+.+.||+|+||.||+|... +|+.||||++..... ..+.+.+|++++++++||
T Consensus 17 ~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 96 (298)
T 2zv2_A 17 LKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHP 96 (298)
T ss_dssp EEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCCCT
T ss_pred EEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCCCC
Confidence 3578999999999999864 588999999865421 124688999999999999
Q ss_pred ccccccEEEEe--CCceEEEEEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEE
Q 036334 402 NVVPLRAFYYS--KDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNIL 479 (654)
Q Consensus 402 niv~l~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIl 479 (654)
||+++++++.+ .+..++||||+++++|.+++. ...+++..++.++.|++.||+|||+++ |+||||||+|||
T Consensus 97 ~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~------~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~Nil 169 (298)
T 2zv2_A 97 NVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT------LKPLSEDQARFYFQDLIKGIEYLHYQK-IIHRDIKPSNLL 169 (298)
T ss_dssp TBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC------SSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEE
T ss_pred CCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh------cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEE
Confidence 99999999987 567899999999999988764 346999999999999999999999998 999999999999
Q ss_pred ECCCCCeEEeccCCCCCcCCC----CCCCccccccCccccCCCC---CCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCC
Q 036334 480 LRPDHDACVSDFGLNPLFGNT----TPPTRVAGYRAPEVVETRK---VTFKSDVYSFGVLLLELLTGKAPNQASLGEEGI 552 (654)
Q Consensus 480 l~~~~~~kl~Dfgla~~~~~~----~~~~~~~~y~aPE~~~~~~---~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~ 552 (654)
++.++.+||+|||++...... ....++..|+|||++.+.. ++.++|||||||++|||++|+.||....
T Consensus 170 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~----- 244 (298)
T 2zv2_A 170 VGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER----- 244 (298)
T ss_dssp ECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS-----
T ss_pred ECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc-----
Confidence 999999999999999766433 2356788899999997655 4788999999999999999999996431
Q ss_pred ChhHHHHHHhhhchhhhhhhHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 036334 553 DLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVR 611 (654)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 611 (654)
.......+..... ..........++.+++.+||+.||++|||+.|+++
T Consensus 245 -~~~~~~~~~~~~~----------~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 245 -IMCLHSKIKSQAL----------EFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp -HHHHHHHHHHCCC----------CCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred -HHHHHHHHhcccC----------CCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 1111111111110 00001112235677888999999999999999875
No 64
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=2.6e-40 Score=339.98 Aligned_cols=254 Identities=15% Similarity=0.172 Sum_probs=202.5
Q ss_pred hhccccccCceeEEEEEe-cCCcEEEEEEecccccCHHHHHHHHHHHhcc-CCCccccccEEEEeCCceEEEEEecCCCc
Q 036334 350 SAEVLGKGSVGTSYKAVL-EEGTTVVVKRLKEVAVGKREFEMQMEVLGKI-KHDNVVPLRAFYYSKDEKLLVYDYMPAGS 427 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e~~~~g~ 427 (654)
+.+.||+|+||.||+|.. .+|+.||||++.... ....+.+|+.+++++ +|+|++++++++.+....++||||+ +++
T Consensus 14 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~ 91 (298)
T 1csn_A 14 VGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPS 91 (298)
T ss_dssp EEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CCB
T ss_pred EEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC-ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-CCC
Confidence 357899999999999995 568999999986543 334678899999999 7999999999999999999999999 999
Q ss_pred hhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCC-----eEEeccCCCCCcCCC--
Q 036334 428 LSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHD-----ACVSDFGLNPLFGNT-- 500 (654)
Q Consensus 428 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~-----~kl~Dfgla~~~~~~-- 500 (654)
|.+++... ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++. +||+|||++......
T Consensus 92 L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~ 166 (298)
T 1csn_A 92 LEDLLDLC----GRKFSVKTVAMAAKQMLARVQSIHEKS-LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVT 166 (298)
T ss_dssp HHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTT
T ss_pred HHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEeccCCCCCCCeEEEEECccccccccccc
Confidence 99999743 235999999999999999999999998 999999999999988776 999999998765432
Q ss_pred ---------CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhh
Q 036334 501 ---------TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVF 571 (654)
Q Consensus 501 ---------~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 571 (654)
....++..|+|||++.+..++.++|||||||++|||++|+.||....... ....+..+.........
T Consensus 167 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~- 242 (298)
T 1csn_A 167 KQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAAT---NKQKYERIGEKKQSTPL- 242 (298)
T ss_dssp CCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCC---HHHHHHHHHHHHHHSCH-
T ss_pred cccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccc---cHHHHHHHHhhccCccH-
Confidence 23356778999999999999999999999999999999999998643322 11111111111100000
Q ss_pred hHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCC
Q 036334 572 DVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGE 620 (654)
Q Consensus 572 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 620 (654)
... . .....++.+++.+||+.||++||++++|++.|+++.+..
T Consensus 243 -~~~--~---~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~ 285 (298)
T 1csn_A 243 -REL--C---AGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERL 285 (298)
T ss_dssp -HHH--T---TTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred -HHH--H---hhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhc
Confidence 000 0 112346778888999999999999999999999997654
No 65
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=1.5e-40 Score=346.13 Aligned_cols=254 Identities=26% Similarity=0.370 Sum_probs=192.0
Q ss_pred HhhccccccCceeEEEEEecCC----cEEEEEEecccc---cCHHHHHHHHHHHhccCCCccccccEEEEeCCce-----
Q 036334 349 ASAEVLGKGSVGTSYKAVLEEG----TTVVVKRLKEVA---VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEK----- 416 (654)
Q Consensus 349 ~~~~~lg~G~fg~Vy~~~~~~g----~~vavK~~~~~~---~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~----- 416 (654)
.+.+.||+|+||.||+|..... ..||||+++... ...+++.+|++++++++||||+++++++...+..
T Consensus 26 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 105 (323)
T 3qup_A 26 TLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPI 105 (323)
T ss_dssp EEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-------C
T ss_pred EEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCCCc
Confidence 4568899999999999986543 279999997642 2346788999999999999999999999877655
Q ss_pred -EEEEEecCCCchhhhhccCCC-CCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCC
Q 036334 417 -LLVYDYMPAGSLSALLHGSRG-SGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLN 494 (654)
Q Consensus 417 -~lv~e~~~~g~L~~~l~~~~~-~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla 494 (654)
++||||+++|+|.+++..... .....+++..+++++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++
T Consensus 106 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~-ivH~Dikp~NIli~~~~~~kl~Dfg~a 184 (323)
T 3qup_A 106 PMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN-FIHRDLAARNCMLAEDMTVCVADFGLS 184 (323)
T ss_dssp EEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTSCEEECCCCC-
T ss_pred cEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC-cccCCCCcceEEEcCCCCEEEeecccc
Confidence 999999999999999964321 12235899999999999999999999998 999999999999999999999999999
Q ss_pred CCcCCCC------CCCccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhchh
Q 036334 495 PLFGNTT------PPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWT 567 (654)
Q Consensus 495 ~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 567 (654)
....... ...++..|+|||.+.+..++.++|||||||++|||++ |+.||......+ ..........
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~------~~~~~~~~~~- 257 (323)
T 3qup_A 185 RKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE------IYNYLIGGNR- 257 (323)
T ss_dssp ----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG------HHHHHHTTCC-
T ss_pred ccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH------HHHHHhcCCC-
Confidence 7654321 2334567999999999999999999999999999999 899997543221 1111111110
Q ss_pred hhhhhHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCC
Q 036334 568 AEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGE 620 (654)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 620 (654)
.........++.+++.+||+.||++|||+.++++.|+++....
T Consensus 258 ----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~ 300 (323)
T 3qup_A 258 ----------LKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHL 300 (323)
T ss_dssp ----------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred ----------CCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 0111222346778888999999999999999999999998764
No 66
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=1.5e-40 Score=338.61 Aligned_cols=249 Identities=26% Similarity=0.438 Sum_probs=203.9
Q ss_pred hhccccccCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCCCchh
Q 036334 350 SAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLS 429 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g~L~ 429 (654)
+.+.||+|+||.||+|...++..||||+++......+.+.+|++++++++||||+++++++. .+..++||||+++++|.
T Consensus 17 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~ 95 (279)
T 1qpc_A 17 LVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLV 95 (279)
T ss_dssp EEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCTTCBHH
T ss_pred heeeecCCCCeEEEEEEEcCCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecCCCCCHH
Confidence 45789999999999999888889999999877767788999999999999999999999876 45689999999999999
Q ss_pred hhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC-----CCCC
Q 036334 430 ALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT-----TPPT 504 (654)
Q Consensus 430 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~-----~~~~ 504 (654)
+++.... ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++...... ....
T Consensus 96 ~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~ 171 (279)
T 1qpc_A 96 DFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAK 171 (279)
T ss_dssp HHTTSHH---HHTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTCC
T ss_pred HHHhcCC---CCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHhhEEEcCCCCEEECCCcccccccCcccccccCCC
Confidence 9997421 125899999999999999999999998 999999999999999999999999998766432 2233
Q ss_pred ccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccCChHH
Q 036334 505 RVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEE 583 (654)
Q Consensus 505 ~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 583 (654)
++..|+|||++.+..++.++||||||+++|||++ |+.||..... ......+... .. ......
T Consensus 172 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~------~~~~~~~~~~-~~----------~~~~~~ 234 (279)
T 1qpc_A 172 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNLERG-YR----------MVRPDN 234 (279)
T ss_dssp CCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCH------HHHHHHHHTT-CC----------CCCCTT
T ss_pred CccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCH------HHHHHHHhcc-cC----------CCCccc
Confidence 4567999999988889999999999999999999 8999865321 1222221111 10 001112
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCC
Q 036334 584 EMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGE 620 (654)
Q Consensus 584 ~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 620 (654)
...++.+++.+||+.||++|||+.++++.|+++....
T Consensus 235 ~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 271 (279)
T 1qpc_A 235 CPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 271 (279)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred ccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhc
Confidence 2346778888999999999999999999999997553
No 67
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1.7e-40 Score=351.08 Aligned_cols=245 Identities=18% Similarity=0.230 Sum_probs=191.0
Q ss_pred hhccccccCceeEEEEEec-CCcEEEEEEecccccCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCCCch
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSL 428 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g~L 428 (654)
+.+.||+|+||.||++... +++.||||++.......+.+.+|+.++++++||||+++++++.+.+..++||||+++|+|
T Consensus 24 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L 103 (361)
T 3uc3_A 24 FVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGEL 103 (361)
T ss_dssp EEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBH
T ss_pred EEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCCCCCH
Confidence 3578999999999999965 689999999987666667889999999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCC--eEEeccCCCCCcCC---CCCC
Q 036334 429 SALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHD--ACVSDFGLNPLFGN---TTPP 503 (654)
Q Consensus 429 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~--~kl~Dfgla~~~~~---~~~~ 503 (654)
.+++.. ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++. +||+|||++..... ....
T Consensus 104 ~~~l~~-----~~~~~~~~~~~i~~ql~~~L~~LH~~~-ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~~~~~ 177 (361)
T 3uc3_A 104 YERICN-----AGRFSEDEARFFFQQLLSGVSYCHSMQ-ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST 177 (361)
T ss_dssp HHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCSCCCCGGGEEECSSSSCCEEECCCCCC------------
T ss_pred HHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEcCCCCceEEEeecCccccccccCCCCCC
Confidence 999963 235899999999999999999999998 999999999999987765 99999999874432 2345
Q ss_pred CccccccCccccCCCCCCcc-hhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccCChH
Q 036334 504 TRVAGYRAPEVVETRKVTFK-SDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIE 582 (654)
Q Consensus 504 ~~~~~y~aPE~~~~~~~~~~-~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 582 (654)
.+++.|+|||++.+..++.+ +|||||||++|||++|+.||....... .....+..+....... ....
T Consensus 178 ~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~--~~~~~~~~~~~~~~~~-------~~~~--- 245 (361)
T 3uc3_A 178 VGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR--DYRKTIQRILSVKYSI-------PDDI--- 245 (361)
T ss_dssp ---CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC--CHHHHHHHHHTTCCCC-------CTTS---
T ss_pred cCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH--HHHHHHHHHhcCCCCC-------CCcC---
Confidence 67888999999988877665 899999999999999999997643322 2222222222211100 0000
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 036334 583 EEMVQLLQIAMGCVSTVPDQRPAMQEVVRM 612 (654)
Q Consensus 583 ~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 612 (654)
....++.+++.+||+.||++|||+.|+++.
T Consensus 246 ~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 246 RISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp CCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred CCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 112356678889999999999999999875
No 68
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=1.9e-40 Score=359.26 Aligned_cols=245 Identities=21% Similarity=0.294 Sum_probs=196.2
Q ss_pred HHhhccccccCceeEEEEEec-CCcEEEEEEeccccc---CHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEec
Q 036334 348 RASAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAV---GKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYM 423 (654)
Q Consensus 348 ~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 423 (654)
|.+.+.||+|+||.||+|... +|+.||+|++..... ..+.+.+|++++++++||||+++++++.+++..++||||+
T Consensus 13 Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E~~ 92 (444)
T 3soa_A 13 YQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLV 92 (444)
T ss_dssp EEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEECCC
T ss_pred eEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEEeC
Confidence 445688999999999999854 689999999876532 3456889999999999999999999999999999999999
Q ss_pred CCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEEC---CCCCeEEeccCCCCCcCCC
Q 036334 424 PAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLR---PDHDACVSDFGLNPLFGNT 500 (654)
Q Consensus 424 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~---~~~~~kl~Dfgla~~~~~~ 500 (654)
++|+|.+.+.. ...+++..+..++.||+.||+|||+++ |+||||||+|||++ .++.+||+|||++......
T Consensus 93 ~gg~L~~~i~~-----~~~~~e~~~~~i~~qil~aL~~lH~~g-ivHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~ 166 (444)
T 3soa_A 93 TGGELFEDIVA-----REYYSEADASHCIQQILEAVLHCHQMG-VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGE 166 (444)
T ss_dssp BCCBHHHHHHH-----CSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTT
T ss_pred CCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEEeccCCCCcEEEccCceeEEecCC
Confidence 99999999874 345999999999999999999999998 99999999999998 4578999999999776543
Q ss_pred ----CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhh
Q 036334 501 ----TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELM 576 (654)
Q Consensus 501 ----~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 576 (654)
....+++.|+|||++.+..++.++||||+||++|||++|..||..... ......+..... +....
T Consensus 167 ~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~------~~~~~~i~~~~~-----~~~~~ 235 (444)
T 3soa_A 167 QQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ------HRLYQQIKAGAY-----DFPSP 235 (444)
T ss_dssp CCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSH------HHHHHHHHHTCC-----CCCTT
T ss_pred CceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccH------HHHHHHHHhCCC-----CCCcc
Confidence 234678889999999999999999999999999999999999965321 122222222111 00000
Q ss_pred ccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 036334 577 RYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRM 612 (654)
Q Consensus 577 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 612 (654)
.+... ..++.+++.+||+.||++|||+.|+++.
T Consensus 236 ~~~~~---s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 236 EWDTV---TPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp TTTTS---CHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred ccccC---CHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 11112 2356677889999999999999999863
No 69
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1.3e-40 Score=344.88 Aligned_cols=253 Identities=27% Similarity=0.385 Sum_probs=202.9
Q ss_pred HhhccccccCceeEEEEEe------cCCcEEEEEEeccccc--CHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEE
Q 036334 349 ASAEVLGKGSVGTSYKAVL------EEGTTVVVKRLKEVAV--GKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVY 420 (654)
Q Consensus 349 ~~~~~lg~G~fg~Vy~~~~------~~g~~vavK~~~~~~~--~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 420 (654)
.+.+.||+|+||.||+|.. .+++.||||+++.... ..+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 26 ~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 105 (314)
T 2ivs_A 26 VLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIV 105 (314)
T ss_dssp EEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred eeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceEEEE
Confidence 3457899999999999985 2357899999976432 3467889999999999999999999999999999999
Q ss_pred EecCCCchhhhhccCCCC-------------------CCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEEC
Q 036334 421 DYMPAGSLSALLHGSRGS-------------------GRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLR 481 (654)
Q Consensus 421 e~~~~g~L~~~l~~~~~~-------------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~ 481 (654)
||+++|+|.+++...... ....+++..++.++.|++.||+|||+++ |+||||||+||+++
T Consensus 106 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dikp~NIli~ 184 (314)
T 2ivs_A 106 EYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK-LVHRDLAARNILVA 184 (314)
T ss_dssp ECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEE
T ss_pred eecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC-CcccccchheEEEc
Confidence 999999999999754321 1234899999999999999999999998 99999999999999
Q ss_pred CCCCeEEeccCCCCCcCCC------CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCCCh
Q 036334 482 PDHDACVSDFGLNPLFGNT------TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDL 554 (654)
Q Consensus 482 ~~~~~kl~Dfgla~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~pf~~~~~~~~~~~ 554 (654)
.++.+||+|||++...... ....++..|+|||++.+..++.++|||||||++|||++ |+.||......+
T Consensus 185 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~---- 260 (314)
T 2ivs_A 185 EGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPER---- 260 (314)
T ss_dssp TTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG----
T ss_pred CCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH----
Confidence 9999999999998765432 22344567999999988889999999999999999999 999997543211
Q ss_pred hHHHHHHhhhchhhhhhhHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcC
Q 036334 555 PRWVQSVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRG 619 (654)
Q Consensus 555 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 619 (654)
+...+..... ..........+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 261 ---~~~~~~~~~~----------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 261 ---LFNLLKTGHR----------MERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp ---HHHHHHTTCC----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred ---HHHHhhcCCc----------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 1111111110 011112234677888899999999999999999999998754
No 70
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=2.6e-40 Score=348.40 Aligned_cols=248 Identities=18% Similarity=0.295 Sum_probs=197.8
Q ss_pred HHHhhccccccCceeEEEEEec-CCcEEEEEEecccc------cCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEE
Q 036334 347 LRASAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVA------VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLV 419 (654)
Q Consensus 347 ~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~------~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv 419 (654)
.|.+.+.||+|+||.||+|... +|+.||||++.... ...+.+.+|+.++++++||||+++++++.+++..++|
T Consensus 25 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv 104 (351)
T 3c0i_A 25 VYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMV 104 (351)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred ceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 3455788999999999999864 58999999986431 2467789999999999999999999999999999999
Q ss_pred EEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCC---eEEeccCCCCC
Q 036334 420 YDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHD---ACVSDFGLNPL 496 (654)
Q Consensus 420 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~---~kl~Dfgla~~ 496 (654)
|||+++|+|.+.+..... ....+++..++.++.||+.||+|||+++ |+||||||+|||++.++. +||+|||++..
T Consensus 105 ~e~~~g~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~ 182 (351)
T 3c0i_A 105 FEFMDGADLCFEIVKRAD-AGFVYSEAVASHYMRQILEALRYCHDNN-IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ 182 (351)
T ss_dssp EECCSSCBHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECSSSTTCCEEECCCTTCEE
T ss_pred EeCCCCCCHHHHHHHhcc-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCChHHeEEecCCCCCcEEEecCcceeE
Confidence 999999999888754321 2345899999999999999999999998 999999999999987655 99999999977
Q ss_pred cCCC----CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhh
Q 036334 497 FGNT----TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFD 572 (654)
Q Consensus 497 ~~~~----~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 572 (654)
.... ....+++.|+|||++.+..++.++|||||||++|||++|+.||.... ......+...... +.
T Consensus 183 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-------~~~~~~i~~~~~~---~~ 252 (351)
T 3c0i_A 183 LGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK-------ERLFEGIIKGKYK---MN 252 (351)
T ss_dssp CCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH-------HHHHHHHHHTCCC---CC
T ss_pred ecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH-------HHHHHHHHcCCCC---CC
Confidence 6543 23457888999999999999999999999999999999999997521 1112222211110 00
Q ss_pred HhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 036334 573 VELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVR 611 (654)
Q Consensus 573 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 611 (654)
.. .+.. ...++.+++.+||+.||++|||+.|+++
T Consensus 253 ~~--~~~~---~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 253 PR--QWSH---ISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp HH--HHTT---SCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cc--cccc---CCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 00 0011 1235677888999999999999999975
No 71
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=8.9e-41 Score=345.96 Aligned_cols=256 Identities=27% Similarity=0.411 Sum_probs=205.1
Q ss_pred HhhccccccCceeEEEEEe------cCCcEEEEEEeccccc--CHHHHHHHHHHHhcc-CCCccccccEEEEeCCceEEE
Q 036334 349 ASAEVLGKGSVGTSYKAVL------EEGTTVVVKRLKEVAV--GKREFEMQMEVLGKI-KHDNVVPLRAFYYSKDEKLLV 419 (654)
Q Consensus 349 ~~~~~lg~G~fg~Vy~~~~------~~g~~vavK~~~~~~~--~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~~~~lv 419 (654)
...+.||+|+||.||+|.. .+++.||||+++.... ..+.+.+|+++++++ +||||+++++++.+++..++|
T Consensus 26 ~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv 105 (313)
T 1t46_A 26 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVI 105 (313)
T ss_dssp EEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred hHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEEE
Confidence 3457899999999999984 2467899999976532 346788999999999 899999999999999999999
Q ss_pred EEecCCCchhhhhccCCCC-------------CCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCe
Q 036334 420 YDYMPAGSLSALLHGSRGS-------------GRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDA 486 (654)
Q Consensus 420 ~e~~~~g~L~~~l~~~~~~-------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~ 486 (654)
|||+++|+|.+++...... ....+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+
T Consensus 106 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~ 184 (313)
T 1t46_A 106 TEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN-CIHRDLAARNILLTHGRIT 184 (313)
T ss_dssp EECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEETTTEE
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCccceEEEcCCCCE
Confidence 9999999999999754321 1235899999999999999999999998 9999999999999999999
Q ss_pred EEeccCCCCCcCCCC------CCCccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHH
Q 036334 487 CVSDFGLNPLFGNTT------PPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQ 559 (654)
Q Consensus 487 kl~Dfgla~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~pf~~~~~~~~~~~~~~~~ 559 (654)
||+|||++....... ...++..|+|||++.+..++.++||||||+++|||++ |+.||...... ..+.
T Consensus 185 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~------~~~~ 258 (313)
T 1t46_A 185 KICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD------SKFY 258 (313)
T ss_dssp EECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSS------HHHH
T ss_pred EEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccch------hHHH
Confidence 999999998765432 2234557999999988899999999999999999999 99998754321 1111
Q ss_pred HHhhhchhhhhhhHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCCC
Q 036334 560 SVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGET 621 (654)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 621 (654)
........ ..........+.+++.+||+.||++|||+.|+++.|+++....+
T Consensus 259 ~~~~~~~~----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 310 (313)
T 1t46_A 259 KMIKEGFR----------MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISEST 310 (313)
T ss_dssp HHHHHTCC----------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC
T ss_pred HHhccCCC----------CCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHhh
Confidence 11111110 00111223467788889999999999999999999999876543
No 72
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.2e-40 Score=340.70 Aligned_cols=249 Identities=27% Similarity=0.392 Sum_probs=205.9
Q ss_pred hhccccccCceeEEEEEecC-CcEEEEEEecccccCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCCCch
Q 036334 350 SAEVLGKGSVGTSYKAVLEE-GTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSL 428 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g~L 428 (654)
+.+.||+|+||.||+|.... +..||+|+++......+.+.+|++++++++||||+++++++.+++..++||||+++++|
T Consensus 17 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 96 (288)
T 3kfa_A 17 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 96 (288)
T ss_dssp EEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTEEH
T ss_pred EEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcCCCCcH
Confidence 45789999999999999764 88999999987766678899999999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCCC-----CC
Q 036334 429 SALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTT-----PP 503 (654)
Q Consensus 429 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~-----~~ 503 (654)
.+++... ....+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++....... ..
T Consensus 97 ~~~~~~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~ 172 (288)
T 3kfa_A 97 LDYLREC---NRQEVSAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 172 (288)
T ss_dssp HHHHHHC---CTTTSCHHHHHHHHHHHHHHHHHHHHHT-CCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEETTE
T ss_pred HHHHHhc---ccCCccHhHHHHHHHHHHHHHHHHHHCC-ccCCCCCcceEEEcCCCCEEEccCccceeccCCccccccCC
Confidence 9999754 2356899999999999999999999998 9999999999999999999999999998765432 12
Q ss_pred CccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccCChH
Q 036334 504 TRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIE 582 (654)
Q Consensus 504 ~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 582 (654)
.++..|+|||++.+..++.++||||||+++|||++ |..||...... .... ....... .....
T Consensus 173 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~------~~~~-~~~~~~~----------~~~~~ 235 (288)
T 3kfa_A 173 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS------QVYE-LLEKDYR----------MERPE 235 (288)
T ss_dssp EECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG------GHHH-HHHTTCC----------CCCCT
T ss_pred ccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH------HHHH-HHhccCC----------CCCCC
Confidence 33456999999998899999999999999999999 99998753221 1111 1111110 01111
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcC
Q 036334 583 EEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRG 619 (654)
Q Consensus 583 ~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 619 (654)
.....+.+++.+||+.||++|||++++++.|+++...
T Consensus 236 ~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~ 272 (288)
T 3kfa_A 236 GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 272 (288)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence 2234677888899999999999999999999988654
No 73
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=2.8e-40 Score=350.79 Aligned_cols=241 Identities=20% Similarity=0.284 Sum_probs=195.2
Q ss_pred hhccccccCceeEEEEEec-CCcEEEEEEecccc----cCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecC
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVA----VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMP 424 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~ 424 (654)
+.+.||+|+||.||++... +++.||+|++.... ...+.+.+|++++++++||||++++++|.+.+..++||||+.
T Consensus 19 i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~e~~~ 98 (384)
T 4fr4_A 19 ILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLL 98 (384)
T ss_dssp EEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCC
Confidence 4578999999999999965 48899999997542 334678899999999999999999999999999999999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC---C
Q 036334 425 AGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT---T 501 (654)
Q Consensus 425 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~---~ 501 (654)
+|+|.+++.. ...+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++...... .
T Consensus 99 gg~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~ 172 (384)
T 4fr4_A 99 GGDLRYHLQQ-----NVHFKEETVKLFICELVMALDYLQNQR-IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQIT 172 (384)
T ss_dssp TEEHHHHHHT-----TCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCTTCCBC
T ss_pred CCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCcHHHeEECCCCCEEEeccceeeeccCCCcee
Confidence 9999999973 345999999999999999999999998 999999999999999999999999999876433 3
Q ss_pred CCCccccccCccccCC---CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhcc
Q 036334 502 PPTRVAGYRAPEVVET---RKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRY 578 (654)
Q Consensus 502 ~~~~~~~y~aPE~~~~---~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 578 (654)
...+|+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ....+....... .
T Consensus 173 ~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~---~~~~~~~~~~~~------------~ 237 (384)
T 4fr4_A 173 TMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTS---SKEIVHTFETTV------------V 237 (384)
T ss_dssp CCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSC---HHHHHHHHHHCC------------C
T ss_pred ccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCcc---HHHHHHHHhhcc------------c
Confidence 4567888999999864 458999999999999999999999997543322 111111111110 0
Q ss_pred CChHHHHHHHHHHHhhccCCCCCCCCC-HHHHHH
Q 036334 579 HNIEEEMVQLLQIAMGCVSTVPDQRPA-MQEVVR 611 (654)
Q Consensus 579 ~~~~~~~~~l~~l~~~cl~~dP~~RPs-~~evl~ 611 (654)
.........+.+++.+||+.||++||+ ++++.+
T Consensus 238 ~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 238 TYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp CCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred CCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 111122346777888999999999998 666653
No 74
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=2.7e-41 Score=345.84 Aligned_cols=248 Identities=24% Similarity=0.382 Sum_probs=197.3
Q ss_pred hhccccccCceeEEEEEecC-C-------cEEEEEEecccc-cCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEE
Q 036334 350 SAEVLGKGSVGTSYKAVLEE-G-------TTVVVKRLKEVA-VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVY 420 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~~-g-------~~vavK~~~~~~-~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 420 (654)
+.+.||+|+||+||+|.... + ..||+|++.... ...+.+.+|++++++++||||+++++++.+++..++||
T Consensus 12 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 91 (289)
T 4fvq_A 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQ 91 (289)
T ss_dssp EEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCEEEE
T ss_pred eeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCEEEE
Confidence 35789999999999998543 3 479999987653 44577899999999999999999999999999999999
Q ss_pred EecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCC--------eEEeccC
Q 036334 421 DYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHD--------ACVSDFG 492 (654)
Q Consensus 421 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~--------~kl~Dfg 492 (654)
||+++|+|.+++... ...+++..++.++.|++.||+|||+++ |+||||||+|||++.++. +||+|||
T Consensus 92 e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg 166 (289)
T 4fvq_A 92 EFVKFGSLDTYLKKN----KNCINILWKLEVAKQLAAAMHFLEENT-LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPG 166 (289)
T ss_dssp ECCTTCBHHHHHHHT----GGGCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEEECCBGGGTBCCEEEECCCC
T ss_pred ECCCCCCHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHhhCC-eECCCcCcceEEEecCCcccccccceeeeccCc
Confidence 999999999999743 234899999999999999999999998 999999999999998887 9999999
Q ss_pred CCCCcCCCCCCCccccccCccccCC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhh
Q 036334 493 LNPLFGNTTPPTRVAGYRAPEVVET-RKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVF 571 (654)
Q Consensus 493 la~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 571 (654)
++..........++..|+|||++.+ ..++.++|||||||++|||++|..|+..... ...... ......
T Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~-----~~~~~~-~~~~~~----- 235 (289)
T 4fvq_A 167 ISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALD-----SQRKLQ-FYEDRH----- 235 (289)
T ss_dssp SCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSC-----HHHHHH-HHHTTC-----
T ss_pred ccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccc-----hHHHHH-HhhccC-----
Confidence 9977655444456778999999987 7799999999999999999996555432211 111111 111000
Q ss_pred hHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCC
Q 036334 572 DVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGE 620 (654)
Q Consensus 572 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 620 (654)
........++.+++.+||+.||++|||++|+++.|+++....
T Consensus 236 -------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~ 277 (289)
T 4fvq_A 236 -------QLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPD 277 (289)
T ss_dssp -------CCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC---
T ss_pred -------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCC
Confidence 000011234677888999999999999999999999998654
No 75
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.2e-40 Score=343.63 Aligned_cols=250 Identities=24% Similarity=0.419 Sum_probs=197.2
Q ss_pred hccccccCceeEEEEEecC-----CcEEEEEEeccccc--CHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEec
Q 036334 351 AEVLGKGSVGTSYKAVLEE-----GTTVVVKRLKEVAV--GKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYM 423 (654)
Q Consensus 351 ~~~lg~G~fg~Vy~~~~~~-----g~~vavK~~~~~~~--~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 423 (654)
.+.||+|+||.||+|.... +..||||+++.... ...++.+|++++++++||||+++++++.+.+..++||||+
T Consensus 49 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 128 (333)
T 1mqb_A 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYM 128 (333)
T ss_dssp EEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred ccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEEeCC
Confidence 4789999999999998653 23699999976432 3456889999999999999999999999999999999999
Q ss_pred CCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCCC--
Q 036334 424 PAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTT-- 501 (654)
Q Consensus 424 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~-- 501 (654)
++|+|.+++... ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++.......
T Consensus 129 ~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~ 203 (333)
T 1mqb_A 129 ENGALDKFLREK----DGEFSVLQLVGMLRGIAAGMKYLANMN-YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA 203 (333)
T ss_dssp TTEEHHHHHHHT----TTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCCCC----------
T ss_pred CCCcHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChheEEECCCCcEEECCCCcchhhcccccc
Confidence 999999999743 245899999999999999999999998 9999999999999999999999999998764321
Q ss_pred -----CCCccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhh
Q 036334 502 -----PPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVEL 575 (654)
Q Consensus 502 -----~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 575 (654)
...++..|+|||++.+..++.++|||||||++|||++ |+.||..... ......+. ...
T Consensus 204 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~------~~~~~~~~-~~~--------- 267 (333)
T 1mqb_A 204 TYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN------HEVMKAIN-DGF--------- 267 (333)
T ss_dssp -------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH------HHHHHHHH-TTC---------
T ss_pred ccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCH------HHHHHHHH-CCC---------
Confidence 1223557999999998899999999999999999999 9999964321 11111111 110
Q ss_pred hccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCCCC
Q 036334 576 MRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGETD 622 (654)
Q Consensus 576 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 622 (654)
...........+.+++.+||+.||++||++.++++.|+++.+....
T Consensus 268 -~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~~ 313 (333)
T 1mqb_A 268 -RLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDS 313 (333)
T ss_dssp -CCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGGG
T ss_pred -cCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcchh
Confidence 0011112234577888899999999999999999999999876443
No 76
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.8e-40 Score=346.68 Aligned_cols=238 Identities=22% Similarity=0.298 Sum_probs=194.2
Q ss_pred hhccccccCceeEEEEEe-cCCcEEEEEEecccc----cCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecC
Q 036334 350 SAEVLGKGSVGTSYKAVL-EEGTTVVVKRLKEVA----VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMP 424 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~-~~g~~vavK~~~~~~----~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~ 424 (654)
+.+.||+|+||+||+|.. .+|+.||||++.... .....+.+|+.+++.++||||+++++++.+++..++||||+
T Consensus 13 i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~- 91 (336)
T 3h4j_B 13 IRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA- 91 (336)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCC-
T ss_pred EEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEECC-
Confidence 357899999999999996 568999999987542 23457899999999999999999999999999999999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC---C
Q 036334 425 AGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT---T 501 (654)
Q Consensus 425 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~---~ 501 (654)
+|+|.+++.. ...+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++...... .
T Consensus 92 ~g~l~~~l~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~~~ 165 (336)
T 3h4j_B 92 GGELFDYIVE-----KKRMTEDEGRRFFQQIICAIEYCHRHK-IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLK 165 (336)
T ss_dssp CEEHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHHT-CCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBTTC
T ss_pred CCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCchhhEEEcCCCCEEEEEeccceeccCCcccc
Confidence 7899998863 245999999999999999999999998 999999999999999999999999999876543 3
Q ss_pred CCCccccccCccccCCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccCC
Q 036334 502 PPTRVAGYRAPEVVETRKV-TFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHN 580 (654)
Q Consensus 502 ~~~~~~~y~aPE~~~~~~~-~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 580 (654)
...+++.|+|||++.+..+ +.++|||||||++|||++|+.||......+.... +.... ...
T Consensus 166 ~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~---------------i~~~~---~~~ 227 (336)
T 3h4j_B 166 TSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKK---------------VNSCV---YVM 227 (336)
T ss_dssp CCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCC---------------CCSSC---CCC
T ss_pred cccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHH---------------HHcCC---CCC
Confidence 4567888999999988776 7899999999999999999999976432221100 00000 000
Q ss_pred hHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 036334 581 IEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRM 612 (654)
Q Consensus 581 ~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 612 (654)
.......+.+++.+||+.||.+|||++|+++.
T Consensus 228 p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 228 PDFLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp CTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred cccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 11112356678889999999999999999874
No 77
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=8.3e-41 Score=348.76 Aligned_cols=247 Identities=26% Similarity=0.414 Sum_probs=194.9
Q ss_pred hhccccccCceeEEEEEec-CCc----EEEEEEecccc--cCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEe
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGT----TVVVKRLKEVA--VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDY 422 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~----~vavK~~~~~~--~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 422 (654)
..++||+|+||+||+|.+. +|+ +||+|.++... ...+++.+|+.++++++||||++++++|.++ ..++|+||
T Consensus 19 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~v~e~ 97 (327)
T 3poz_A 19 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQL 97 (327)
T ss_dssp EEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS-SEEEEEEC
T ss_pred cceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-CeEEEEEe
Confidence 3578999999999999854 344 46888876442 3457899999999999999999999999865 47899999
Q ss_pred cCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCCC-
Q 036334 423 MPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTT- 501 (654)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~- 501 (654)
+.+|+|.+++... ...+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++.......
T Consensus 98 ~~~g~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 172 (327)
T 3poz_A 98 MPFGCLLDYVREH----KDNIGSQYLLNWCVQIAKGMNYLEDRR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 172 (327)
T ss_dssp CTTCBHHHHHHHS----TTSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC
T ss_pred cCCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHhhCC-eeCCCCChheEEECCCCCEEEccCcceeEccCCcc
Confidence 9999999999753 345899999999999999999999998 9999999999999999999999999987654322
Q ss_pred -----CCCccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhh
Q 036334 502 -----PPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVEL 575 (654)
Q Consensus 502 -----~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 575 (654)
...++..|+|||++.+..++.++|||||||++|||++ |+.||......+ +...+....
T Consensus 173 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-------~~~~~~~~~--------- 236 (327)
T 3poz_A 173 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE-------ISSILEKGE--------- 236 (327)
T ss_dssp -------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG-------HHHHHHTTC---------
T ss_pred cccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH-------HHHHHHcCC---------
Confidence 2234567999999999999999999999999999999 999997543221 111111111
Q ss_pred hccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcC
Q 036334 576 MRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRG 619 (654)
Q Consensus 576 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 619 (654)
..........++.+++.+||+.||++||++.|+++.|+++.+.
T Consensus 237 -~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 237 -RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp -CCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred -CCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 0111122334677888899999999999999999999998754
No 78
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=3.7e-40 Score=343.99 Aligned_cols=241 Identities=20% Similarity=0.327 Sum_probs=190.8
Q ss_pred HhhccccccCceeEEEEEec-CCcEEEEEEecccc--cCHHHHHHHHHHHhccCCCccccccEEEEeCC-----------
Q 036334 349 ASAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVA--VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKD----------- 414 (654)
Q Consensus 349 ~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~----------- 414 (654)
.+.+.||+|+||.||+|... +|+.||||+++... ...+.+.+|++++++++||||++++++|.+..
T Consensus 9 ~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~ 88 (332)
T 3qd2_B 9 EPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEI 88 (332)
T ss_dssp EEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC-
T ss_pred ceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhhh
Confidence 34578999999999999976 68999999997543 34567899999999999999999999986643
Q ss_pred ----------------------------------------------ceEEEEEecCCCchhhhhccCCCCCCCCCCHHHH
Q 036334 415 ----------------------------------------------EKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNR 448 (654)
Q Consensus 415 ----------------------------------------------~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~ 448 (654)
..++||||+++|+|.+++.... .....++..+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~ 166 (332)
T 3qd2_B 89 WLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRC--SLEDREHGVC 166 (332)
T ss_dssp -------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCC--SGGGSCHHHH
T ss_pred hhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhccc--CccchhhHHH
Confidence 2799999999999999998543 2344678889
Q ss_pred HHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC----------------CCCCccccccCc
Q 036334 449 MRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT----------------TPPTRVAGYRAP 512 (654)
Q Consensus 449 ~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~----------------~~~~~~~~y~aP 512 (654)
++++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++...... ....++..|+||
T Consensus 167 ~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP 245 (332)
T 3qd2_B 167 LHIFIQIAEAVEFLHSKG-LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSP 245 (332)
T ss_dssp HHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSCH
T ss_pred HHHHHHHHHHHHHHHhCC-eeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccCh
Confidence 999999999999999998 999999999999999999999999998766443 223577889999
Q ss_pred cccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccCChHHHHHHHHHHH
Q 036334 513 EVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMVQLLQIA 592 (654)
Q Consensus 513 E~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 592 (654)
|++.+..++.++|||||||++|||++|..|+... ....... .... ..........++.+++
T Consensus 246 E~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~--------~~~~~~~-~~~~----------~~~~~~~~~~~~~~li 306 (332)
T 3qd2_B 246 EQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER--------VRIITDV-RNLK----------FPLLFTQKYPQEHMMV 306 (332)
T ss_dssp HHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH--------HHHHHHH-HTTC----------CCHHHHHHCHHHHHHH
T ss_pred HHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH--------HHHHHHh-hccC----------CCcccccCChhHHHHH
Confidence 9999999999999999999999999987664210 0001110 0000 0001123334567888
Q ss_pred hhccCCCCCCCCCHHHHHH
Q 036334 593 MGCVSTVPDQRPAMQEVVR 611 (654)
Q Consensus 593 ~~cl~~dP~~RPs~~evl~ 611 (654)
.+||+.||++|||++|+++
T Consensus 307 ~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 307 QDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp HHHHCSSGGGSCCHHHHHH
T ss_pred HHHccCCCCcCCCHHHHhh
Confidence 9999999999999999986
No 79
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=2.5e-40 Score=349.76 Aligned_cols=245 Identities=21% Similarity=0.305 Sum_probs=197.4
Q ss_pred HHhhccccccCceeEEEEEec-CCcEEEEEEecccccC---HHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEec
Q 036334 348 RASAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAVG---KREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYM 423 (654)
Q Consensus 348 ~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 423 (654)
|.+.+.||+|+||.||+|... +|+.||+|++...... .+.+.+|+.++++++||||+++++++.+++..++||||+
T Consensus 31 y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e~~ 110 (362)
T 2bdw_A 31 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLV 110 (362)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred eEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecC
Confidence 445688999999999999865 5899999999765332 356788999999999999999999999999999999999
Q ss_pred CCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCC---CeEEeccCCCCCcCCC
Q 036334 424 PAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDH---DACVSDFGLNPLFGNT 500 (654)
Q Consensus 424 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~---~~kl~Dfgla~~~~~~ 500 (654)
++|+|.+++.. ...+++..++.++.||+.||+|||+++ |+||||||+|||++.++ .+||+|||++......
T Consensus 111 ~gg~L~~~l~~-----~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~ 184 (362)
T 2bdw_A 111 TGGELFEDIVA-----REFYSEADASHCIQQILESIAYCHSNG-IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 184 (362)
T ss_dssp CSCBHHHHHTT-----CSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTC
T ss_pred CCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCchHHEEEecCCCCCCEEEeecCcceEecCC
Confidence 99999999873 345899999999999999999999998 99999999999998654 5999999999876543
Q ss_pred C---CCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhc
Q 036334 501 T---PPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMR 577 (654)
Q Consensus 501 ~---~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 577 (654)
. ...+++.|+|||++.+..++.++|||||||++|||++|+.||..... ......+....... ....
T Consensus 185 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~------~~~~~~i~~~~~~~-----~~~~ 253 (362)
T 2bdw_A 185 EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ------HRLYAQIKAGAYDY-----PSPE 253 (362)
T ss_dssp CSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHTCCCC-----CTTG
T ss_pred cccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH------HHHHHHHHhCCCCC-----Cccc
Confidence 2 34678889999999998999999999999999999999999975321 12222222211100 0000
Q ss_pred cCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 036334 578 YHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRM 612 (654)
Q Consensus 578 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 612 (654)
+ .....++.+++.+||+.||++|||+.|+++.
T Consensus 254 ~---~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 254 W---DTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp G---GGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred c---cCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 1 1112356678889999999999999998754
No 80
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=5.5e-40 Score=349.77 Aligned_cols=240 Identities=19% Similarity=0.295 Sum_probs=190.6
Q ss_pred hhccccccCceeEEEEEec-CCcEEEEEEecccccC----HHHHHHHHHHHhcc-CCCccccccEEEEeCCceEEEEEec
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAVG----KREFEMQMEVLGKI-KHDNVVPLRAFYYSKDEKLLVYDYM 423 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~----~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e~~ 423 (654)
+.++||+|+||+||+|... +++.||+|++++.... .+.+..|..++.++ +||||++++++|.+.+..++||||+
T Consensus 56 ~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E~~ 135 (396)
T 4dc2_A 56 LLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYV 135 (396)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECC
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEEcC
Confidence 4578999999999999965 4789999999865322 24577889998877 8999999999999999999999999
Q ss_pred CCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCC----
Q 036334 424 PAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN---- 499 (654)
Q Consensus 424 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~---- 499 (654)
++|+|.+++... ..+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++.....
T Consensus 136 ~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~g-ivHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~ 209 (396)
T 4dc2_A 136 NGGDLMFHMQRQ-----RKLPEEHARFYSAEISLALNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT 209 (396)
T ss_dssp TTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCC
T ss_pred CCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC-EEeccCCHHHEEECCCCCEEEeecceeeecccCCCc
Confidence 999999999743 45899999999999999999999998 99999999999999999999999999976322
Q ss_pred CCCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCC--CChhHHHHHHhhhchhhhhhhHhhhc
Q 036334 500 TTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEG--IDLPRWVQSVVREEWTAEVFDVELMR 577 (654)
Q Consensus 500 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 577 (654)
.....+|+.|+|||++.+..++.++|||||||++|||++|+.||......+. ......+...+.... .
T Consensus 210 ~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~--------~-- 279 (396)
T 4dc2_A 210 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ--------I-- 279 (396)
T ss_dssp BCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCC--------C--
T ss_pred cccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccc--------c--
Confidence 2345678889999999999999999999999999999999999975432221 111111211111110 0
Q ss_pred cCChHHHHHHHHHHHhhccCCCCCCCCCH
Q 036334 578 YHNIEEEMVQLLQIAMGCVSTVPDQRPAM 606 (654)
Q Consensus 578 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~ 606 (654)
........++.+++.+||+.||++||++
T Consensus 280 -~~p~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 280 -RIPRSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp -CCCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred -CCCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 0111122356678889999999999985
No 81
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=1.7e-40 Score=346.03 Aligned_cols=245 Identities=20% Similarity=0.331 Sum_probs=178.2
Q ss_pred hccccccCceeEEEEEec-CCcEEEEEEecccccCHHHHHHHHHHHhccC-CCccccccEEEEeCCceEEEEEecCCCch
Q 036334 351 AEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAVGKREFEMQMEVLGKIK-HDNVVPLRAFYYSKDEKLLVYDYMPAGSL 428 (654)
Q Consensus 351 ~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~-hpniv~l~~~~~~~~~~~lv~e~~~~g~L 428 (654)
.+.||+|+||.||+|... +|+.||||++... ....+.+|+.+++++. ||||+++++++.+++..++||||+++|+|
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 93 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR--MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL 93 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG--GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh--hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcH
Confidence 367999999999999965 5899999998653 3467788999999997 99999999999999999999999999999
Q ss_pred hhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCC---CeEEeccCCCCCcCCC----C
Q 036334 429 SALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDH---DACVSDFGLNPLFGNT----T 501 (654)
Q Consensus 429 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~---~~kl~Dfgla~~~~~~----~ 501 (654)
.+++.. ...+++..++.++.|++.||+|||+++ |+||||||+|||++.++ .+||+|||++...... .
T Consensus 94 ~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~ 167 (325)
T 3kn6_A 94 FERIKK-----KKHFSETEASYIMRKLVSAVSHMHDVG-VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLK 167 (325)
T ss_dssp HHHHHH-----CSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEEC----CEEEECCCTTCEECCC------
T ss_pred HHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-CeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCccc
Confidence 999974 346999999999999999999999998 99999999999998766 7999999999765433 2
Q ss_pred CCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCC-ChhHHHHHHhhhchhhhhhhHhhhccCC
Q 036334 502 PPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGI-DLPRWVQSVVREEWTAEVFDVELMRYHN 580 (654)
Q Consensus 502 ~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 580 (654)
...++..|+|||++.+..++.++|||||||++|||++|+.||......... ........+....... ... .
T Consensus 168 ~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~--~--- 239 (325)
T 3kn6_A 168 TPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSF---EGE--A--- 239 (325)
T ss_dssp ----------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCC---CSH--H---
T ss_pred ccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCC---Ccc--c---
Confidence 345577899999999999999999999999999999999999865432211 1222222222111100 000 0
Q ss_pred hHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 036334 581 IEEEMVQLLQIAMGCVSTVPDQRPAMQEVVR 611 (654)
Q Consensus 581 ~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 611 (654)
......++.+++.+||+.||++|||++|+++
T Consensus 240 ~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 240 WKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp HHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred ccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 0112345777888999999999999998864
No 82
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=8.1e-41 Score=348.57 Aligned_cols=247 Identities=26% Similarity=0.396 Sum_probs=195.0
Q ss_pred hhccccccCceeEEEEEec-CCcE----EEEEEecccc--cCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEe
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTT----VVVKRLKEVA--VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDY 422 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~----vavK~~~~~~--~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 422 (654)
..+.||+|+||+||+|.+. +++. ||+|.+.... .....+.+|+.++++++||||+++++++. .+..++||||
T Consensus 17 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~ 95 (325)
T 3kex_A 17 KLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQY 95 (325)
T ss_dssp EEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEEEEEC
T ss_pred eeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEEEEEe
Confidence 3578999999999999854 3443 7888775432 22356778999999999999999999886 5678999999
Q ss_pred cCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCCC-
Q 036334 423 MPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTT- 501 (654)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~- 501 (654)
+++|+|.+++... ...+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++.......
T Consensus 96 ~~~~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~ 170 (325)
T 3kex_A 96 LPLGSLLDHVRQH----RGALGPQLLLNWGVQIAKGMYYLEEHG-MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDK 170 (325)
T ss_dssp CTTCBSHHHHHSS----GGGSCTTHHHHHHHHHHHHHHHHHHTT-CCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTT
T ss_pred CCCCCHHHHHHHc----cccCCHHHHHHHHHHHHHHHHHHHhCC-CCCCccchheEEECCCCeEEECCCCcccccCcccc
Confidence 9999999999743 235889999999999999999999998 9999999999999999999999999998764332
Q ss_pred -----CCCccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhh
Q 036334 502 -----PPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVEL 575 (654)
Q Consensus 502 -----~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 575 (654)
...++..|+|||++.+..++.++|||||||++|||++ |+.||......+ .. ..+.....
T Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~----~~~~~~~~-------- 235 (325)
T 3kex_A 171 QLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE---VP----DLLEKGER-------- 235 (325)
T ss_dssp CCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTH---HH----HHHHTTCB--------
T ss_pred cccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHH---HH----HHHHcCCC--------
Confidence 2334567999999998899999999999999999999 999997643211 11 11111100
Q ss_pred hccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcC
Q 036334 576 MRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRG 619 (654)
Q Consensus 576 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 619 (654)
.........++.+++.+||+.||++|||++|+++.|+++...
T Consensus 236 --~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 236 --LAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp --CCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred --CCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 000111222567788899999999999999999999999754
No 83
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=4.6e-40 Score=336.39 Aligned_cols=246 Identities=25% Similarity=0.419 Sum_probs=194.7
Q ss_pred hccccccCceeEEEEEec-CCcEEEEEEecccccC--------HHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEE
Q 036334 351 AEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAVG--------KREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYD 421 (654)
Q Consensus 351 ~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~--------~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 421 (654)
.+.||+|+||.||+|... +++.||+|++...... .+.+.+|++++++++||||+++++++.+.. ++|||
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~lv~e 101 (287)
T 4f0f_A 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--RMVME 101 (287)
T ss_dssp EEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--EEEEE
T ss_pred hhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--eEEEE
Confidence 478999999999999964 6899999998654221 167889999999999999999999986544 79999
Q ss_pred ecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCC-eecCCCCCCcEEECCCCC-----eEEeccCCCC
Q 036334 422 YMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGK-IVHGNIKASNILLRPDHD-----ACVSDFGLNP 495 (654)
Q Consensus 422 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~-ivHrDlk~~NIll~~~~~-----~kl~Dfgla~ 495 (654)
|+++|+|.+++... ...+++..++.++.|++.||+|||+++. |+||||||+||+++.++. +||+|||++.
T Consensus 102 ~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~ 177 (287)
T 4f0f_A 102 FVPCGDLYHRLLDK----AHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ 177 (287)
T ss_dssp CCTTCBHHHHHHCT----TSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCB
T ss_pred ecCCCCHHHHHhcc----cCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCccc
Confidence 99999999988643 3469999999999999999999998753 999999999999988876 9999999997
Q ss_pred CcCCC-CCCCccccccCcccc--CCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhh
Q 036334 496 LFGNT-TPPTRVAGYRAPEVV--ETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFD 572 (654)
Q Consensus 496 ~~~~~-~~~~~~~~y~aPE~~--~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 572 (654)
..... ....++..|+|||++ ....++.++|||||||++|||++|+.||......+ ..............
T Consensus 178 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~----~~~~~~~~~~~~~~---- 249 (287)
T 4f0f_A 178 QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK----IKFINMIREEGLRP---- 249 (287)
T ss_dssp CCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCH----HHHHHHHHHSCCCC----
T ss_pred cccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccH----HHHHHHHhccCCCC----
Confidence 65443 335677889999998 44567899999999999999999999997543221 11111111111110
Q ss_pred HhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 036334 573 VELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616 (654)
Q Consensus 573 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 616 (654)
.........+.+++.+||+.||++|||++|+++.|+++
T Consensus 250 ------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 250 ------TIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp ------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred ------CCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 11112234677888899999999999999999999874
No 84
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=2.7e-40 Score=334.66 Aligned_cols=248 Identities=25% Similarity=0.335 Sum_probs=198.9
Q ss_pred hhccccccCceeEEEEEecCCcEEEEEEeccccc---CHHHHHHHHHHHhccCCCccccccEEEEeC--CceEEEEEecC
Q 036334 350 SAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAV---GKREFEMQMEVLGKIKHDNVVPLRAFYYSK--DEKLLVYDYMP 424 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~---~~~~~~~e~~~l~~l~hpniv~l~~~~~~~--~~~~lv~e~~~ 424 (654)
..+.||+|+||.||+|... |+.||||+++.... ..+++.+|+.++++++||||+++++++.+. +..++||||++
T Consensus 14 ~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~ 92 (271)
T 3kmu_A 14 FLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMP 92 (271)
T ss_dssp EEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECCT
T ss_pred HHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecccC
Confidence 3578999999999999986 89999999976533 245688999999999999999999999877 67899999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccC-CeecCCCCCCcEEECCCCCeEEeccCCCCCcCCCCCC
Q 036334 425 AGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSG-KIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPP 503 (654)
Q Consensus 425 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~ 503 (654)
+|+|.+++.... ...+++..++.++.|++.||+|||+.+ .|+||||||+||+++.++.++|+|||++..... ...
T Consensus 93 ~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~-~~~ 168 (271)
T 3kmu_A 93 YGSLYNVLHEGT---NFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS-PGR 168 (271)
T ss_dssp TCBHHHHHHSCS---SCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC-TTC
T ss_pred CCcHHHHHhhcc---cCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeeecc-cCc
Confidence 999999998532 235899999999999999999999764 499999999999999999999999888765433 334
Q ss_pred CccccccCccccCCCCCCc---chhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccCC
Q 036334 504 TRVAGYRAPEVVETRKVTF---KSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHN 580 (654)
Q Consensus 504 ~~~~~y~aPE~~~~~~~~~---~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 580 (654)
.++..|+|||++.+..++. ++|||||||++|||++|+.||..... .............. ..
T Consensus 169 ~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~------~~~~~~~~~~~~~~----------~~ 232 (271)
T 3kmu_A 169 MYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSN------MEIGMKVALEGLRP----------TI 232 (271)
T ss_dssp BSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCH------HHHHHHHHHSCCCC----------CC
T ss_pred cCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccCh------HHHHHHHHhcCCCC----------CC
Confidence 6678899999998765544 79999999999999999999975321 11122222111111 01
Q ss_pred hHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhc
Q 036334 581 IEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNR 618 (654)
Q Consensus 581 ~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 618 (654)
......++.+++.+||+.||++|||++|+++.|+++.+
T Consensus 233 ~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 233 PPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 11223457788889999999999999999999999865
No 85
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=3.3e-40 Score=345.44 Aligned_cols=266 Identities=24% Similarity=0.312 Sum_probs=194.0
Q ss_pred hccccccCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHhccCCCccccccEEEEe-----CCceEEEEEecCC
Q 036334 351 AEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYS-----KDEKLLVYDYMPA 425 (654)
Q Consensus 351 ~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~-----~~~~~lv~e~~~~ 425 (654)
.+.||+|+||.||+|.. +++.||||++..........+.|+..+..++||||+++++++.. ....++||||+++
T Consensus 18 ~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~ 96 (336)
T 3g2f_A 18 LELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPN 96 (336)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECCCTT
T ss_pred eeecccCCCeEEEEEEE-CCeEEEEEEeeccchhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEEecCCC
Confidence 47899999999999987 48999999997544333333344444566899999999986643 2256899999999
Q ss_pred CchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcc---------CCeecCCCCCCcEEECCCCCeEEeccCCCCC
Q 036334 426 GSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS---------GKIVHGNIKASNILLRPDHDACVSDFGLNPL 496 (654)
Q Consensus 426 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~---------~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~ 496 (654)
|+|.+++... ..++..+++++.|++.||+|||+. + |+||||||+|||++.++.+||+|||++..
T Consensus 97 g~L~~~l~~~------~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~-ivH~Dikp~Nill~~~~~~kL~DFG~a~~ 169 (336)
T 3g2f_A 97 GSLXKYLSLH------TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPA-ISHRDLNSRNVLVKNDGTCVISDFGLSMR 169 (336)
T ss_dssp CBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCC-EECSSCSGGGEEECTTSCEEECCCTTCEE
T ss_pred CcHHHHHhhc------ccchhHHHHHHHHHHHHHHHHHhhhccccccccc-eeecccccceEEEcCCCcEEEeeccceee
Confidence 9999999743 358999999999999999999988 7 99999999999999999999999999976
Q ss_pred cCCC------------CCCCccccccCccccCC-------CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhH-
Q 036334 497 FGNT------------TPPTRVAGYRAPEVVET-------RKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPR- 556 (654)
Q Consensus 497 ~~~~------------~~~~~~~~y~aPE~~~~-------~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~- 556 (654)
.... ....++..|+|||++.+ ..++.++|||||||++|||++|..||.............
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~ 249 (336)
T 3g2f_A 170 LTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQ 249 (336)
T ss_dssp CSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTH
T ss_pred cccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhh
Confidence 5322 12357788999999976 456788999999999999999977765433322111100
Q ss_pred ----------HHHHHhhhchhhhhhhHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCCCCCCCC
Q 036334 557 ----------WVQSVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGETDDGLR 626 (654)
Q Consensus 557 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~ 626 (654)
..............+.. ..........++.+++.+||+.||++|||++|+++.|+++...-.++...
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~~~~~ 326 (336)
T 3g2f_A 250 TEVGNHPTFEDMQVLVSREKQRPKFPE---AWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWERNKSV 326 (336)
T ss_dssp HHHCSSCCHHHHHHHHTTSCCCCCCCT---TCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC----
T ss_pred cccCCCchHHHHHhhhcccccCCCCCc---ccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHhcccC
Confidence 00000000000000000 11122335567889999999999999999999999999999776555554
Q ss_pred C
Q 036334 627 Q 627 (654)
Q Consensus 627 ~ 627 (654)
.
T Consensus 327 ~ 327 (336)
T 3g2f_A 327 S 327 (336)
T ss_dssp -
T ss_pred C
Confidence 4
No 86
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.3e-40 Score=349.19 Aligned_cols=254 Identities=26% Similarity=0.382 Sum_probs=193.7
Q ss_pred hhccccccCceeEEEEEec--CC--cEEEEEEeccccc--CHHHHHHHHHHHhccCCCccccccEEEEe-CCceEEEEEe
Q 036334 350 SAEVLGKGSVGTSYKAVLE--EG--TTVVVKRLKEVAV--GKREFEMQMEVLGKIKHDNVVPLRAFYYS-KDEKLLVYDY 422 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~--~g--~~vavK~~~~~~~--~~~~~~~e~~~l~~l~hpniv~l~~~~~~-~~~~~lv~e~ 422 (654)
..++||+|+||.||+|.+. ++ ..||||.++.... ..+++.+|+.++++++||||++++++|.. ++..++||||
T Consensus 93 ~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e~ 172 (373)
T 3c1x_A 93 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPY 172 (373)
T ss_dssp EEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEEC
T ss_pred cCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEEC
Confidence 3478999999999999854 22 3689999875432 34678899999999999999999998765 4578999999
Q ss_pred cCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC--
Q 036334 423 MPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT-- 500 (654)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~-- 500 (654)
+++|+|.+++... ...+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 173 ~~~g~L~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~ 247 (373)
T 3c1x_A 173 MKHGDLRNFIRNE----THNPTVKDLIGFGLQVAKGMKFLASKK-FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 247 (373)
T ss_dssp CTTCBHHHHHHCT----TCCCBHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCC-----------
T ss_pred CCCCCHHHHHhhc----ccCCCHHHHHHHHHHHHHHHHHHHHCC-EecCccchheEEECCCCCEEEeecccccccccccc
Confidence 9999999999743 345899999999999999999999998 999999999999999999999999999765322
Q ss_pred ------CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhH
Q 036334 501 ------TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDV 573 (654)
Q Consensus 501 ------~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 573 (654)
....++..|+|||++.+..++.++|||||||++|||++ |.+||......+ .... ......
T Consensus 248 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~---~~~~---~~~~~~------- 314 (373)
T 3c1x_A 248 DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---ITVY---LLQGRR------- 314 (373)
T ss_dssp ----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC---HHHH---HHTTCC-------
T ss_pred ccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH---HHHH---HHcCCC-------
Confidence 12234567999999999999999999999999999999 677776533221 1111 111110
Q ss_pred hhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCCCCCCC
Q 036334 574 ELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGETDDGL 625 (654)
Q Consensus 574 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~ 625 (654)
..........+.+++.+||+.||++|||++|+++.|+++...-.++..
T Consensus 315 ----~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~~~ 362 (373)
T 3c1x_A 315 ----LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHY 362 (373)
T ss_dssp ----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSCCB
T ss_pred ----CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhccccce
Confidence 001111234577888899999999999999999999999877655443
No 87
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-40 Score=349.79 Aligned_cols=256 Identities=22% Similarity=0.339 Sum_probs=200.4
Q ss_pred HhhccccccCceeEEEEEe------cCCcEEEEEEecccc--cCHHHHHHHHHHHhcc-CCCccccccEEEEeCCceEEE
Q 036334 349 ASAEVLGKGSVGTSYKAVL------EEGTTVVVKRLKEVA--VGKREFEMQMEVLGKI-KHDNVVPLRAFYYSKDEKLLV 419 (654)
Q Consensus 349 ~~~~~lg~G~fg~Vy~~~~------~~g~~vavK~~~~~~--~~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~~~~lv 419 (654)
.+.+.||+|+||.||+|.. .++..||||+++... ...+.+.+|+.+++++ +||||+++++++...+..++|
T Consensus 48 ~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 127 (344)
T 1rjb_A 48 EFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLI 127 (344)
T ss_dssp EEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred eeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEEE
Confidence 4467899999999999985 235689999997542 3346789999999999 899999999999999999999
Q ss_pred EEecCCCchhhhhccCCCC------------------CCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEEC
Q 036334 420 YDYMPAGSLSALLHGSRGS------------------GRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLR 481 (654)
Q Consensus 420 ~e~~~~g~L~~~l~~~~~~------------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~ 481 (654)
|||+++|+|.+++...... ....+++..++.++.|++.||+|||+++ |+||||||+||+++
T Consensus 128 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIll~ 206 (344)
T 1rjb_A 128 FEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS-CVHRDLAARNVLVT 206 (344)
T ss_dssp EECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT-EEETTCSGGGEEEE
T ss_pred EecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChhhEEEc
Confidence 9999999999999754321 1134899999999999999999999998 99999999999999
Q ss_pred CCCCeEEeccCCCCCcCCCC------CCCccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCCCh
Q 036334 482 PDHDACVSDFGLNPLFGNTT------PPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDL 554 (654)
Q Consensus 482 ~~~~~kl~Dfgla~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~pf~~~~~~~~~~~ 554 (654)
.++.+||+|||++....... ...++..|+|||++.+..++.++|||||||++|||++ |..||......
T Consensus 207 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~----- 281 (344)
T 1rjb_A 207 HGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVD----- 281 (344)
T ss_dssp TTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS-----
T ss_pred CCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcH-----
Confidence 99999999999998664332 2234557999999988899999999999999999998 99999754321
Q ss_pred hHHHHHHhhhchhhhhhhHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCCC
Q 036334 555 PRWVQSVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGET 621 (654)
Q Consensus 555 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 621 (654)
..+.......... ........++.+++.+||+.||++|||+.|+++.|+.+.....
T Consensus 282 -~~~~~~~~~~~~~----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~ 337 (344)
T 1rjb_A 282 -ANFYKLIQNGFKM----------DQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAE 337 (344)
T ss_dssp -HHHHHHHHTTCCC----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC----
T ss_pred -HHHHHHHhcCCCC----------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHH
Confidence 1122222211110 0111123457778889999999999999999999999976654
No 88
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=3.6e-40 Score=342.08 Aligned_cols=238 Identities=22% Similarity=0.266 Sum_probs=197.1
Q ss_pred hhccccccCceeEEEEEec-CCcEEEEEEecccc----cCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecC
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVA----VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMP 424 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~ 424 (654)
+.+.||+|+||+||+|... +|+.||+|++++.. ...+.+.+|+.+++.++||||+++++++.+.+..++||||++
T Consensus 10 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~~~ 89 (318)
T 1fot_A 10 ILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIE 89 (318)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeCCC
Confidence 3578999999999999965 68999999997642 334667889999999999999999999999999999999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC-CCC
Q 036334 425 AGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT-TPP 503 (654)
Q Consensus 425 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~-~~~ 503 (654)
+|+|.+++... ..+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++...... ...
T Consensus 90 gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~~~~ 163 (318)
T 1fot_A 90 GGELFSLLRKS-----QRFPNPVAKFYAAEVCLALEYLHSKD-IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTL 163 (318)
T ss_dssp SCBHHHHHHHT-----SSCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCCC
T ss_pred CCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChheEEEcCCCCEEEeecCcceecCCccccc
Confidence 99999999742 45899999999999999999999998 999999999999999999999999999876543 345
Q ss_pred CccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccCChHH
Q 036334 504 TRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEE 583 (654)
Q Consensus 504 ~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 583 (654)
.+++.|+|||++.+..++.++|||||||++|||++|+.||.... .......+...... ... .
T Consensus 164 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~------~~~~~~~i~~~~~~---------~p~---~ 225 (318)
T 1fot_A 164 CGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSN------TMKTYEKILNAELR---------FPP---F 225 (318)
T ss_dssp CSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHHCCCC---------CCT---T
T ss_pred cCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC------HHHHHHHHHhCCCC---------CCC---C
Confidence 67888999999999999999999999999999999999997532 12222222222110 011 1
Q ss_pred HHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 036334 584 EMVQLLQIAMGCVSTVPDQRP-----AMQEVVR 611 (654)
Q Consensus 584 ~~~~l~~l~~~cl~~dP~~RP-----s~~evl~ 611 (654)
...++.+++.+|+..||++|| +++|+++
T Consensus 226 ~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 226 FNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp SCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred CCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 123566778899999999999 8888874
No 89
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=4.4e-42 Score=353.97 Aligned_cols=255 Identities=23% Similarity=0.394 Sum_probs=184.1
Q ss_pred hhccccccCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHhc--cCCCccccccEEEEeCC----ceEEEEEec
Q 036334 350 SAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGK--IKHDNVVPLRAFYYSKD----EKLLVYDYM 423 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~--l~hpniv~l~~~~~~~~----~~~lv~e~~ 423 (654)
+.+.||+|+||.||+|... |+.||||+++.. ....+.+|.+++.. ++||||+++++++.... ..++||||+
T Consensus 7 ~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~ 83 (303)
T 3gxj_A 7 LQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYH 83 (303)
T ss_dssp CCEEEEECSSSEEEEC-CT-TSCEEEEECC-T--THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEEEECC
T ss_pred ehhhccCCCCeEEEEEEEc-CcceEEEEeccc--chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEEEecc
Confidence 3578999999999999875 899999998653 34566778888777 78999999999998876 789999999
Q ss_pred CCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhh--------ccCCeecCCCCCCcEEECCCCCeEEeccCCCC
Q 036334 424 PAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLH--------VSGKIVHGNIKASNILLRPDHDACVSDFGLNP 495 (654)
Q Consensus 424 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH--------~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~ 495 (654)
++|+|.+++.. ..+++..+++++.|++.||+||| +.+ |+||||||+|||++.++.+||+|||++.
T Consensus 84 ~~g~L~~~l~~------~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~-ivH~Dlkp~Nil~~~~~~~kl~DFg~a~ 156 (303)
T 3gxj_A 84 EHGSLFDYLNR------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLAV 156 (303)
T ss_dssp TTCCHHHHHHH------CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC--CCCSCCCGGGC-CCTTCCC-BCCCCC-C
T ss_pred CCCCHHHHHhc------cCcchHHHHHHHHHHHHHHHHHHHHHhhhccCCC-EeeCcCCHHHeEECCCCCEEEeecCcce
Confidence 99999999963 24788889999999999999999 777 9999999999999999999999999997
Q ss_pred CcCCCCC--------CCccccccCccccCCC------CCCcchhHHHHHHHHHHHHhC----------CCCCCCCCCCCC
Q 036334 496 LFGNTTP--------PTRVAGYRAPEVVETR------KVTFKSDVYSFGVLLLELLTG----------KAPNQASLGEEG 551 (654)
Q Consensus 496 ~~~~~~~--------~~~~~~y~aPE~~~~~------~~~~~~DvwslGvil~el~tg----------~~pf~~~~~~~~ 551 (654)
....... ..++..|+|||++.+. .++.++|||||||++|||++| +.||........
T Consensus 157 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~~ 236 (303)
T 3gxj_A 157 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 236 (303)
T ss_dssp CEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-CC
T ss_pred eccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCCc
Confidence 6543322 2578889999999765 344789999999999999999 566654322111
Q ss_pred CChhHHHHHHhhhchhhhhhhHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCC
Q 036334 552 IDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGE 620 (654)
Q Consensus 552 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 620 (654)
............. . .+.........+....+.+++.+||+.||++|||++|+++.|+++.+.+
T Consensus 237 -~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~ 299 (303)
T 3gxj_A 237 -SVEEMRKVVCEQK-L----RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp -CCC-CHHHHTTSC-C----CCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC-
T ss_pred -cHHHHHHHHHHhh-c----CCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhc
Confidence 1111111111111 1 1111111112355667889999999999999999999999999998765
No 90
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.7e-40 Score=338.78 Aligned_cols=253 Identities=25% Similarity=0.339 Sum_probs=199.1
Q ss_pred hhccccccCceeEEEEEecC----CcEEEEEEeccccc--CHHHHHHHHHHHhccCCCccccccEEEEeCCce-EEEEEe
Q 036334 350 SAEVLGKGSVGTSYKAVLEE----GTTVVVKRLKEVAV--GKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEK-LLVYDY 422 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~~----g~~vavK~~~~~~~--~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~-~lv~e~ 422 (654)
..++||+|+||+||+|.+.+ +..||+|++..... ..+.+.+|+.++++++||||+++++++.+.+.. ++||||
T Consensus 25 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~ 104 (298)
T 3pls_A 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPY 104 (298)
T ss_dssp EEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECC
T ss_pred cCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEec
Confidence 35789999999999998532 23799999876432 346788999999999999999999999876665 999999
Q ss_pred cCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC--
Q 036334 423 MPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT-- 500 (654)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~-- 500 (654)
+.+|+|.+++... ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++......
T Consensus 105 ~~~~~L~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 179 (298)
T 3pls_A 105 MCHGDLLQFIRSP----QRNPTVKDLISFGLQVARGMEYLAEQK-FVHRDLAARNCMLDESFTVKVADFGLARDILDREY 179 (298)
T ss_dssp CTTCBHHHHHHCT----TCCCBHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGG
T ss_pred ccCCCHHHHHhcc----ccCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCcceEEEcCCCcEEeCcCCCcccccCCcc
Confidence 9999999999742 345899999999999999999999998 999999999999999999999999999754321
Q ss_pred ------CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHh
Q 036334 501 ------TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVE 574 (654)
Q Consensus 501 ------~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 574 (654)
....++..|+|||.+.+..++.++||||||+++|||++|..|+...... ........... .
T Consensus 180 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~-----~~~~~~~~~~~-~------- 246 (298)
T 3pls_A 180 YSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP-----FDLTHFLAQGR-R------- 246 (298)
T ss_dssp GCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG-----GGHHHHHHTTC-C-------
T ss_pred cccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCH-----HHHHHHhhcCC-C-------
Confidence 2334566799999999999999999999999999999966664432211 11111111111 0
Q ss_pred hhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCCCCC
Q 036334 575 LMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGETDD 623 (654)
Q Consensus 575 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 623 (654)
..........+.+++.+||+.||++|||++++++.|+++......+
T Consensus 247 ---~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~~ 292 (298)
T 3pls_A 247 ---LPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGD 292 (298)
T ss_dssp ---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCSC
T ss_pred ---CCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhcc
Confidence 0011112235778888999999999999999999999998765443
No 91
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=2.8e-40 Score=337.02 Aligned_cols=248 Identities=21% Similarity=0.338 Sum_probs=190.6
Q ss_pred HhhccccccCceeEEEEEecC----CcEEEEEEecccc--cCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEe
Q 036334 349 ASAEVLGKGSVGTSYKAVLEE----GTTVVVKRLKEVA--VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDY 422 (654)
Q Consensus 349 ~~~~~lg~G~fg~Vy~~~~~~----g~~vavK~~~~~~--~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 422 (654)
.+.+.||+|+||.||+|.... +..||+|+++... ...+.+.+|+.++++++||||+++++++ .++..++||||
T Consensus 18 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~ 96 (281)
T 1mp8_A 18 ELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMEL 96 (281)
T ss_dssp EEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-CSSSCEEEEEC
T ss_pred EEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEE-ccCccEEEEec
Confidence 345789999999999998643 4579999987543 2345688999999999999999999997 45678999999
Q ss_pred cCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCCC-
Q 036334 423 MPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTT- 501 (654)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~- 501 (654)
+++|+|.+++... ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++.......
T Consensus 97 ~~~~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 171 (281)
T 1mp8_A 97 CTLGELRSFLQVR----KYSLDLASLILYAYQLSTALAYLESKR-FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 171 (281)
T ss_dssp CTTEEHHHHHHHT----TTTSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECC------------
T ss_pred CCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCC-eecccccHHHEEECCCCCEEECccccccccCcccc
Confidence 9999999999743 235899999999999999999999998 9999999999999999999999999998764432
Q ss_pred ----CCCccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhh
Q 036334 502 ----PPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELM 576 (654)
Q Consensus 502 ----~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 576 (654)
...++..|+|||++.+..++.++||||||+++|||++ |..||......+ ....+.....
T Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~------~~~~i~~~~~---------- 235 (281)
T 1mp8_A 172 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND------VIGRIENGER---------- 235 (281)
T ss_dssp -------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG------HHHHHHTTCC----------
T ss_pred cccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH------HHHHHHcCCC----------
Confidence 2334567999999998899999999999999999997 999997543221 1111111110
Q ss_pred ccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcC
Q 036334 577 RYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRG 619 (654)
Q Consensus 577 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 619 (654)
..........+.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 236 -~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 277 (281)
T 1mp8_A 236 -LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 277 (281)
T ss_dssp -CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 001112234577788899999999999999999999998654
No 92
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.2e-40 Score=334.65 Aligned_cols=248 Identities=23% Similarity=0.347 Sum_probs=200.9
Q ss_pred ccccccCceeEEEEEec---CCcEEEEEEecccc--cCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCCC
Q 036334 352 EVLGKGSVGTSYKAVLE---EGTTVVVKRLKEVA--VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAG 426 (654)
Q Consensus 352 ~~lg~G~fg~Vy~~~~~---~g~~vavK~~~~~~--~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g 426 (654)
+.||+|+||.||+|... ++..||||+++... ...+++.+|++++++++||||+++++++ ..+..++||||++++
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~ 94 (287)
T 1u59_A 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGG 94 (287)
T ss_dssp EEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEECCTTE
T ss_pred ccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEEeCCCC
Confidence 47999999999999853 57889999998643 2356788999999999999999999998 556789999999999
Q ss_pred chhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC------
Q 036334 427 SLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT------ 500 (654)
Q Consensus 427 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~------ 500 (654)
+|.+++... ...+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 95 ~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~ 169 (287)
T 1u59_A 95 PLHKFLVGK----REEIPVSNVAELLHQVSMGMKYLEEKN-FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTA 169 (287)
T ss_dssp EHHHHHTTC----TTTSCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECC
T ss_pred CHHHHHHhC----CccCCHHHHHHHHHHHHHHHHHHHHCC-EeeCCCchheEEEcCCCCEEECcccceeeeccCcceeec
Confidence 999999642 345899999999999999999999998 999999999999999999999999998766432
Q ss_pred -CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhcc
Q 036334 501 -TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRY 578 (654)
Q Consensus 501 -~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 578 (654)
....++..|+|||++.+..++.++||||||+++|||++ |+.||...... .....+..... .
T Consensus 170 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~------~~~~~i~~~~~-----------~ 232 (287)
T 1u59_A 170 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP------EVMAFIEQGKR-----------M 232 (287)
T ss_dssp CCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH------HHHHHHHTTCC-----------C
T ss_pred cccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH------HHHHHHhcCCc-----------C
Confidence 12334677999999988889999999999999999998 99999754321 11111111110 0
Q ss_pred CChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCCCC
Q 036334 579 HNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGETD 622 (654)
Q Consensus 579 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 622 (654)
........++.+++.+||+.||++||++.++++.|+++..+...
T Consensus 233 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~ 276 (287)
T 1u59_A 233 ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLAS 276 (287)
T ss_dssp CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHT
T ss_pred CCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCC
Confidence 11112234677888899999999999999999999999765533
No 93
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=3.5e-40 Score=339.78 Aligned_cols=253 Identities=23% Similarity=0.380 Sum_probs=197.5
Q ss_pred hhccccccCceeEEEEEe-----cCCcEEEEEEecccc--cCHHHHHHHHHHHhccCCCccccccEEEEeC--CceEEEE
Q 036334 350 SAEVLGKGSVGTSYKAVL-----EEGTTVVVKRLKEVA--VGKREFEMQMEVLGKIKHDNVVPLRAFYYSK--DEKLLVY 420 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~-----~~g~~vavK~~~~~~--~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~--~~~~lv~ 420 (654)
..+.||+|+||.||+|.+ .+++.||||+++... ...+.+.+|++++++++||||+++++++.+. ...++||
T Consensus 25 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~ 104 (302)
T 4e5w_A 25 RIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIM 104 (302)
T ss_dssp EEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEEEE
T ss_pred hhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEEEE
Confidence 457899999999999983 358899999997543 3457789999999999999999999999876 5689999
Q ss_pred EecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC
Q 036334 421 DYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT 500 (654)
Q Consensus 421 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~ 500 (654)
||+++|+|.+++... ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++......
T Consensus 105 e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 179 (302)
T 4e5w_A 105 EFLPSGSLKEYLPKN----KNKINLKQQLKYAVQICKGMDYLGSRQ-YVHRDLAARNVLVESEHQVKIGDFGLTKAIETD 179 (302)
T ss_dssp ECCTTCBHHHHHHHH----TTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCCTTCEECCTT
T ss_pred EeCCCCcHHHHHHhc----cccCCHHHHHHHHHHHHHHHHHhhcCC-cccCCCchheEEEcCCCCEEECcccccccccCC
Confidence 999999999999643 245899999999999999999999998 999999999999999999999999999766433
Q ss_pred -------CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCC--------CCCCChhHHHHHHhhhc
Q 036334 501 -------TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLG--------EEGIDLPRWVQSVVREE 565 (654)
Q Consensus 501 -------~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~--------~~~~~~~~~~~~~~~~~ 565 (654)
....++..|+|||++.+..++.++||||||+++|||++|..|+..... .........+.......
T Consensus 180 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (302)
T 4e5w_A 180 KEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEG 259 (302)
T ss_dssp CCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTT
T ss_pred CcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhcc
Confidence 234456669999999888899999999999999999999998653210 00000000000000000
Q ss_pred hhhhhhhHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhh
Q 036334 566 WTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMN 617 (654)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 617 (654)
. ...........+.+++.+||+.||++|||++|+++.|+++.
T Consensus 260 ~----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 260 K----------RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp C----------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred C----------CCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 0 11111223346778888999999999999999999999875
No 94
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.3e-40 Score=352.18 Aligned_cols=192 Identities=22% Similarity=0.343 Sum_probs=170.4
Q ss_pred hhccccccCceeEEEEEe-cCCcEEEEEEecccccCHHHHHHHHHHHhccC-----CCccccccEEEEeCCceEEEEEec
Q 036334 350 SAEVLGKGSVGTSYKAVL-EEGTTVVVKRLKEVAVGKREFEMQMEVLGKIK-----HDNVVPLRAFYYSKDEKLLVYDYM 423 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~-----hpniv~l~~~~~~~~~~~lv~e~~ 423 (654)
+.+.||+|+||+||+|.. .+++.||||+++......+.+..|+.+++++. ||||+++++++...+..++||||+
T Consensus 39 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~ 118 (360)
T 3llt_A 39 VIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPL 118 (360)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEEECCC
T ss_pred EEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEEEEcCC
Confidence 457899999999999996 46889999999866555667888999999886 999999999999999999999999
Q ss_pred CCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECC---------------------
Q 036334 424 PAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRP--------------------- 482 (654)
Q Consensus 424 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~--------------------- 482 (654)
+++|.+++.... ...+++..++.++.|++.||+|||+++ |+||||||+|||++.
T Consensus 119 -~~~L~~~~~~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~ 193 (360)
T 3llt_A 119 -GPSLYEIITRNN---YNGFHIEDIKLYCIEILKALNYLRKMS-LTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQI 193 (360)
T ss_dssp -CCBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEE
T ss_pred -CCCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCcccEEEccccccccccchhcccccccccc
Confidence 999999997542 345899999999999999999999998 999999999999975
Q ss_pred ----CCCeEEeccCCCCCcCCC-CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 036334 483 ----DHDACVSDFGLNPLFGNT-TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQAS 546 (654)
Q Consensus 483 ----~~~~kl~Dfgla~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~ 546 (654)
++.+||+|||++...... ....++..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 194 ~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 262 (360)
T 3llt_A 194 YRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTH 262 (360)
T ss_dssp EEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCC
Confidence 788999999999865443 3456788899999999999999999999999999999999999754
No 95
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.5e-40 Score=369.56 Aligned_cols=244 Identities=24% Similarity=0.357 Sum_probs=198.0
Q ss_pred cccccCceeEEEEEec---CCcEEEEEEecccc--cCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCCCc
Q 036334 353 VLGKGSVGTSYKAVLE---EGTTVVVKRLKEVA--VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGS 427 (654)
Q Consensus 353 ~lg~G~fg~Vy~~~~~---~g~~vavK~~~~~~--~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g~ 427 (654)
.||+|+||.||+|.+. ++..||||+++... ...+++.+|+++|++++|||||+++++|.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 6999999999999864 46679999998653 346789999999999999999999999876 56899999999999
Q ss_pred hhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCCC------
Q 036334 428 LSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTT------ 501 (654)
Q Consensus 428 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~------ 501 (654)
|.+++... ...+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++.......
T Consensus 422 L~~~l~~~----~~~l~~~~~~~i~~qi~~~L~~LH~~~-iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~ 496 (613)
T 2ozo_A 422 LHKFLVGK----REEIPVSNVAELLHQVSMGMKYLEEKN-FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTAR 496 (613)
T ss_dssp HHHHHTTC----TTTSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCCSTTTTCC---------
T ss_pred HHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHHHCC-EEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeec
Confidence 99999743 345999999999999999999999998 9999999999999999999999999998764321
Q ss_pred -CCCccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccC
Q 036334 502 -PPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYH 579 (654)
Q Consensus 502 -~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 579 (654)
...++..|+|||++.+..++.++|||||||++|||++ |+.||...... .....+ ..+.. ..
T Consensus 497 ~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~------~~~~~i-~~~~~----------~~ 559 (613)
T 2ozo_A 497 SAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP------EVMAFI-EQGKR----------ME 559 (613)
T ss_dssp -----CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH------HHHHHH-HTTCC----------CC
T ss_pred cCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH------HHHHHH-HcCCC----------CC
Confidence 1223467999999998999999999999999999998 99999764321 111111 11110 11
Q ss_pred ChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcC
Q 036334 580 NIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRG 619 (654)
Q Consensus 580 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 619 (654)
....+..++.+++.+||+.||++||++.+|++.|+++...
T Consensus 560 ~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~ 599 (613)
T 2ozo_A 560 CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS 599 (613)
T ss_dssp CCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred CCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 1122335677888899999999999999999999998644
No 96
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=5.5e-40 Score=343.63 Aligned_cols=255 Identities=26% Similarity=0.389 Sum_probs=202.8
Q ss_pred HhhccccccCceeEEEEEec--------CCcEEEEEEeccccc--CHHHHHHHHHHHhcc-CCCccccccEEEEeCCceE
Q 036334 349 ASAEVLGKGSVGTSYKAVLE--------EGTTVVVKRLKEVAV--GKREFEMQMEVLGKI-KHDNVVPLRAFYYSKDEKL 417 (654)
Q Consensus 349 ~~~~~lg~G~fg~Vy~~~~~--------~g~~vavK~~~~~~~--~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~~~~ 417 (654)
.+.+.||+|+||.||+|... ++..||||+++.... ..+++.+|+++++++ +||||+++++++.+.+..+
T Consensus 38 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 117 (334)
T 2pvf_A 38 TLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLY 117 (334)
T ss_dssp EEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCCE
T ss_pred EEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCceE
Confidence 34578999999999999863 467899999976532 345688999999999 8999999999999999999
Q ss_pred EEEEecCCCchhhhhccCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCe
Q 036334 418 LVYDYMPAGSLSALLHGSRGS-----------GRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDA 486 (654)
Q Consensus 418 lv~e~~~~g~L~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~ 486 (654)
+||||+++|+|.+++...... ....+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+
T Consensus 118 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~ 196 (334)
T 2pvf_A 118 VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK-CIHRDLAARNVLVTENNVM 196 (334)
T ss_dssp EEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCE
T ss_pred EEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCccceEEEcCCCCE
Confidence 999999999999999854321 1234899999999999999999999998 9999999999999999999
Q ss_pred EEeccCCCCCcCCC------CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHH
Q 036334 487 CVSDFGLNPLFGNT------TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQ 559 (654)
Q Consensus 487 kl~Dfgla~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~pf~~~~~~~~~~~~~~~~ 559 (654)
||+|||++...... ....++..|+|||++.+..++.++|||||||++|||++ |+.||.... ......
T Consensus 197 kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~------~~~~~~ 270 (334)
T 2pvf_A 197 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP------VEELFK 270 (334)
T ss_dssp EECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC------HHHHHH
T ss_pred EEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCC------HHHHHH
Confidence 99999998765432 22344567999999988889999999999999999999 999986532 111111
Q ss_pred HHhhhchhhhhhhHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCCC
Q 036334 560 SVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGET 621 (654)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 621 (654)
.+. .... .........++.+++.+||+.||++|||++|+++.|+++.....
T Consensus 271 ~~~-~~~~----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~ 321 (334)
T 2pvf_A 271 LLK-EGHR----------MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 321 (334)
T ss_dssp HHH-HTCC----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred HHh-cCCC----------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccc
Confidence 111 1110 01111223467788889999999999999999999999976543
No 97
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=2.9e-40 Score=347.35 Aligned_cols=255 Identities=16% Similarity=0.229 Sum_probs=190.7
Q ss_pred hhccccccCceeEEEEEec----CCcEEEEEEeccccc------------CHHHHHHHHHHHhccCCCccccccEEEEe-
Q 036334 350 SAEVLGKGSVGTSYKAVLE----EGTTVVVKRLKEVAV------------GKREFEMQMEVLGKIKHDNVVPLRAFYYS- 412 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~----~g~~vavK~~~~~~~------------~~~~~~~e~~~l~~l~hpniv~l~~~~~~- 412 (654)
+.+.||+|+||.||+|... .+..||+|++..... ....+.+|+..++.++||||+++++++..
T Consensus 41 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~~~ 120 (345)
T 2v62_A 41 LGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTE 120 (345)
T ss_dssp EEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEEEE
T ss_pred EEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecccccc
Confidence 3578999999999999975 477899999865421 12346678888999999999999999988
Q ss_pred ---CCceEEEEEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCC--CeE
Q 036334 413 ---KDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDH--DAC 487 (654)
Q Consensus 413 ---~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~--~~k 487 (654)
....++||||+ +++|.+++... ..+++..++.++.|++.||+|||+++ |+||||||+|||++.++ .+|
T Consensus 121 ~~~~~~~~lv~e~~-~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~~~k 193 (345)
T 2v62_A 121 FKGRSYRFMVMERL-GIDLQKISGQN-----GTFKKSTVLQLGIRMLDVLEYIHENE-YVHGDIKAANLLLGYKNPDQVY 193 (345)
T ss_dssp SSSCEEEEEEEECE-EEEHHHHCBGG-----GBCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEESSSTTSEE
T ss_pred cCCCcEEEEEEecc-CCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCcCHHHEEEccCCCCcEE
Confidence 67889999999 99999999743 26999999999999999999999998 99999999999999887 999
Q ss_pred EeccCCCCCcCCC-----------CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhH
Q 036334 488 VSDFGLNPLFGNT-----------TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPR 556 (654)
Q Consensus 488 l~Dfgla~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~ 556 (654)
|+|||++...... ....++..|+|||++.+..++.++|||||||++|||++|+.||....... ....
T Consensus 194 L~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~--~~~~ 271 (345)
T 2v62_A 194 LADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDP--VAVQ 271 (345)
T ss_dssp ECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCH--HHHH
T ss_pred EEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccccccc--HHHH
Confidence 9999999765321 23356778999999999899999999999999999999999996432111 0011
Q ss_pred HHHHHhhhchhhhhhhHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhc
Q 036334 557 WVQSVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNR 618 (654)
Q Consensus 557 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 618 (654)
......... +...............++.+++.+||+.||++|||+++|++.|+++.-
T Consensus 272 ~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 272 TAKTNLLDE-----LPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp HHHHHHHHT-----TTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred HHHHhhccc-----ccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 111111111 111110100011223467788889999999999999999999998764
No 98
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=4.7e-40 Score=359.15 Aligned_cols=253 Identities=19% Similarity=0.253 Sum_probs=197.5
Q ss_pred hhccccccCceeEEEEEe-cCCcEEEEEEecccccCHHHHHHHHHHHhccCCC-ccccccEEEEeCCceEEEEEecCCCc
Q 036334 350 SAEVLGKGSVGTSYKAVL-EEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHD-NVVPLRAFYYSKDEKLLVYDYMPAGS 427 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~hp-niv~l~~~~~~~~~~~lv~e~~~~g~ 427 (654)
+.++||+|+||.||+|.. .+++.||||++..... ..++.+|+++++.++|+ +|..+..++...+..++||||+ +++
T Consensus 11 i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~-g~s 88 (483)
T 3sv0_A 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL-GPS 88 (483)
T ss_dssp CCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS-SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-CCB
T ss_pred EEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc-cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-CCC
Confidence 357899999999999995 5689999998765432 34578899999999875 4555556667778889999999 999
Q ss_pred hhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEE---CCCCCeEEeccCCCCCcCCCC---
Q 036334 428 LSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILL---RPDHDACVSDFGLNPLFGNTT--- 501 (654)
Q Consensus 428 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll---~~~~~~kl~Dfgla~~~~~~~--- 501 (654)
|.+++... ...+++..++.++.||+.||+|||+++ |+||||||+|||+ +.++.+||+|||++.......
T Consensus 89 L~~ll~~~----~~~l~~~~~~~i~~qi~~aL~yLH~~g-IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (483)
T 3sv0_A 89 LEDLFNFC----SRKLSLKTVLMLADQMINRVEFVHSKS-FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQ 163 (483)
T ss_dssp HHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCC
T ss_pred HHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccCcceEEEecCCCCCeEEEEeCCcceeccCCcccc
Confidence 99999743 245999999999999999999999998 9999999999999 588999999999997654321
Q ss_pred --------CCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhH
Q 036334 502 --------PPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDV 573 (654)
Q Consensus 502 --------~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 573 (654)
...++..|+|||++.+..++.++|||||||++|||++|+.||....... ....+..+...... ....
T Consensus 164 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~---~~~~~~~i~~~~~~-~~~~- 238 (483)
T 3sv0_A 164 HIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGT---KKQKYEKISEKKVA-TSIE- 238 (483)
T ss_dssp BCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSS---HHHHHHHHHHHHHH-SCHH-
T ss_pred ccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchh---HHHHHHHHhhcccc-ccHH-
Confidence 3457788999999999999999999999999999999999998654322 11222221111110 0000
Q ss_pred hhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcC
Q 036334 574 ELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRG 619 (654)
Q Consensus 574 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 619 (654)
.+ ......++.+++..||+.+|++||++.+|++.|+++...
T Consensus 239 ~l-----~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~ 279 (483)
T 3sv0_A 239 AL-----CRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIR 279 (483)
T ss_dssp HH-----HTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred HH-----hcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHH
Confidence 00 011124678888899999999999999999999998643
No 99
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.5e-40 Score=340.33 Aligned_cols=250 Identities=22% Similarity=0.358 Sum_probs=192.1
Q ss_pred hhccccccCceeEEEEEecCCcEEEEEEeccccc---CHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCCC
Q 036334 350 SAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAV---GKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAG 426 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~---~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g 426 (654)
+.+.||+|+||+||+|...+|+.||+|+++.... ....+.+|++++++++||||+++++++.+++..++||||+++
T Consensus 6 ~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~- 84 (288)
T 1ob3_A 6 GLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ- 84 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSE-
T ss_pred hhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecCC-
Confidence 3578999999999999988899999999865432 246788999999999999999999999999999999999975
Q ss_pred chhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC----CC
Q 036334 427 SLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT----TP 502 (654)
Q Consensus 427 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~----~~ 502 (654)
+|.+++... ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++...... ..
T Consensus 85 ~l~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 159 (288)
T 1ob3_A 85 DLKKLLDVC----EGGLESVTAKSFLLQLLNGIAYCHDRR-VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTH 159 (288)
T ss_dssp EHHHHHHTS----TTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-------
T ss_pred CHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCCEEEeECccccccCcccccccc
Confidence 999988743 245899999999999999999999998 999999999999999999999999998765422 23
Q ss_pred CCccccccCccccCC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhh---h----chhh----hh
Q 036334 503 PTRVAGYRAPEVVET-RKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVR---E----EWTA----EV 570 (654)
Q Consensus 503 ~~~~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~---~----~~~~----~~ 570 (654)
..++..|+|||++.+ ..++.++|||||||++|||++|+.||...... ..+..+.. . .+.. ..
T Consensus 160 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (288)
T 1ob3_A 160 EIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEA------DQLMRIFRILGTPNSKNWPNVTELPK 233 (288)
T ss_dssp --CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH------HHHHHHHHHHCCCCTTTSTTGGGSTT
T ss_pred ccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHHHHCCCChhhchhhhcccc
Confidence 456788999999876 45899999999999999999999999753221 11111111 0 0000 00
Q ss_pred hhHhhhcc------CChHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 036334 571 FDVELMRY------HNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVR 611 (654)
Q Consensus 571 ~~~~~~~~------~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 611 (654)
.+...... ........++.+++.+||+.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 234 YDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp CCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00000000 000112245677888999999999999999976
No 100
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=1.4e-40 Score=349.98 Aligned_cols=238 Identities=23% Similarity=0.275 Sum_probs=192.4
Q ss_pred hhccccccCceeEEEEEec-CCcEEEEEEeccc----ccCHHHHHHHHHHHhcc-CCCccccccEEEEeCCceEEEEEec
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEV----AVGKREFEMQMEVLGKI-KHDNVVPLRAFYYSKDEKLLVYDYM 423 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~----~~~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e~~ 423 (654)
+.++||+|+||+||+|... +|+.||||++++. ....+.+.+|..+++.+ +||||+++++++.+.+..|+||||+
T Consensus 27 ~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E~~ 106 (353)
T 3txo_A 27 FIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFV 106 (353)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECC
T ss_pred EEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEEeCC
Confidence 3578999999999999965 5899999999764 23345677899999888 6999999999999999999999999
Q ss_pred CCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC---
Q 036334 424 PAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT--- 500 (654)
Q Consensus 424 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~--- 500 (654)
++|+|.+++... ..+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 107 ~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~~~ 180 (353)
T 3txo_A 107 NGGDLMFHIQKS-----RRFDEARARFYAAEIISALMFLHDKG-IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVT 180 (353)
T ss_dssp CSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCSCC----
T ss_pred CCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC-CcccCCCHHHEEECCCCCEEEccccceeecccCCcc
Confidence 999999999743 45899999999999999999999998 999999999999999999999999999864322
Q ss_pred -CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccC
Q 036334 501 -TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYH 579 (654)
Q Consensus 501 -~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 579 (654)
....+|+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+...... ..
T Consensus 181 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~------~~~~~~i~~~~~~---------~p- 244 (353)
T 3txo_A 181 TATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE------DDLFEAILNDEVV---------YP- 244 (353)
T ss_dssp -----CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHCCCC---------CC-
T ss_pred ccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCH------HHHHHHHHcCCCC---------CC-
Confidence 234578889999999988899999999999999999999999975322 2222222222110 01
Q ss_pred ChHHHHHHHHHHHhhccCCCCCCCCCH------HHHHH
Q 036334 580 NIEEEMVQLLQIAMGCVSTVPDQRPAM------QEVVR 611 (654)
Q Consensus 580 ~~~~~~~~l~~l~~~cl~~dP~~RPs~------~evl~ 611 (654)
.....++.+++.+||+.||++||++ +|+++
T Consensus 245 --~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 245 --TWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp --TTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred --CCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 1122346677889999999999998 66654
No 101
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1.6e-39 Score=347.44 Aligned_cols=262 Identities=23% Similarity=0.284 Sum_probs=196.9
Q ss_pred hhcccccc--CceeEEEEEec-CCcEEEEEEecccccC---HHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEec
Q 036334 350 SAEVLGKG--SVGTSYKAVLE-EGTTVVVKRLKEVAVG---KREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYM 423 (654)
Q Consensus 350 ~~~~lg~G--~fg~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 423 (654)
+.+.||+| +||.||+|... +|+.||||+++..... .+.+.+|+.++++++||||+++++++.+++..++||||+
T Consensus 29 ~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 108 (389)
T 3gni_B 29 LLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 108 (389)
T ss_dssp EEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred EEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEEEcc
Confidence 35789999 99999999976 6899999999765433 356778999999999999999999999999999999999
Q ss_pred CCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcC-----
Q 036334 424 PAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFG----- 498 (654)
Q Consensus 424 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~----- 498 (654)
++|+|.+++.... ...+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||.+....
T Consensus 109 ~~~~L~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~ 184 (389)
T 3gni_B 109 AYGSAKDLICTHF---MDGMNELAIAYILQGVLKALDYIHHMG-YVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQR 184 (389)
T ss_dssp TTCBHHHHHHHTC---TTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCGGGCEECEETTEE
T ss_pred CCCCHHHHHhhhc---ccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEcccccceeecccccc
Confidence 9999999997542 245899999999999999999999998 9999999999999999999999999875331
Q ss_pred ------CCCCCCccccccCccccCC--CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhh------
Q 036334 499 ------NTTPPTRVAGYRAPEVVET--RKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVRE------ 564 (654)
Q Consensus 499 ------~~~~~~~~~~y~aPE~~~~--~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~------ 564 (654)
......++..|+|||++.+ ..++.++|||||||++|||++|+.||......+. +...+......
T Consensus 185 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~ 262 (389)
T 3gni_B 185 QRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM--LLEKLNGTVPCLLDTST 262 (389)
T ss_dssp CSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTH--HHHC-------------
T ss_pred ccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHH--HHHHhcCCCCccccccc
Confidence 1122356777999999987 6799999999999999999999999976433221 00000000000
Q ss_pred ---ch-------------hhhhhh--------HhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH--HHhhh
Q 036334 565 ---EW-------------TAEVFD--------VELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRM--IENMN 617 (654)
Q Consensus 565 ---~~-------------~~~~~~--------~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~--L~~~~ 617 (654)
.. ...... ..............++.+++.+||+.||++|||++|+++. ++++.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~~ 341 (389)
T 3gni_B 263 IPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIK 341 (389)
T ss_dssp -------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC-
T ss_pred cccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHHh
Confidence 00 000000 0000000111223457788999999999999999999865 44443
No 102
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=8e-40 Score=339.60 Aligned_cols=257 Identities=20% Similarity=0.322 Sum_probs=197.8
Q ss_pred hhccccccCceeEEEEEe-cCCcEEEEEEeccc-ccCHHHHHHHHHHHhccCCCccccccEEEEe----CCceEEEEEec
Q 036334 350 SAEVLGKGSVGTSYKAVL-EEGTTVVVKRLKEV-AVGKREFEMQMEVLGKIKHDNVVPLRAFYYS----KDEKLLVYDYM 423 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~-~~g~~vavK~~~~~-~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~----~~~~~lv~e~~ 423 (654)
+.+.||+|+||.||++.. .+|+.||||++... ....+.+.+|++++++++||||+++++++.. ....++||||+
T Consensus 33 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~ 112 (317)
T 2buj_A 33 FIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFF 112 (317)
T ss_dssp EEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEECC
T ss_pred EEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEeC
Confidence 357899999999999996 56899999998654 2345678899999999999999999999873 34679999999
Q ss_pred CCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCCC--
Q 036334 424 PAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTT-- 501 (654)
Q Consensus 424 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~-- 501 (654)
++|+|.+++..... ....+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++.......
T Consensus 113 ~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~ 190 (317)
T 2buj_A 113 KRGTLWNEIERLKD-KGNFLTEDQILWLLLGICRGLEAIHAKG-YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEG 190 (317)
T ss_dssp TTCBHHHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCSSCEESCEEEES
T ss_pred CCCcHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEEcCCCCEEEEecCcchhccccccc
Confidence 99999999975322 2356999999999999999999999998 9999999999999999999999999987653211
Q ss_pred -----------CCCccccccCccccCCCC---CCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchh
Q 036334 502 -----------PPTRVAGYRAPEVVETRK---VTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWT 567 (654)
Q Consensus 502 -----------~~~~~~~y~aPE~~~~~~---~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 567 (654)
...++..|+|||++.+.. ++.++|||||||++|||++|+.||........ .... ......
T Consensus 191 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~~~----~~~~~~- 264 (317)
T 2buj_A 191 SRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGD-SVAL----AVQNQL- 264 (317)
T ss_dssp HHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTS-CHHH----HHHCC--
T ss_pred ccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccc-hhhH----HhhccC-
Confidence 112467799999987554 68999999999999999999999864211110 1110 011000
Q ss_pred hhhhhHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCCCCC
Q 036334 568 AEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGETDD 623 (654)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 623 (654)
...........+.+++.+||+.||++|||++++++.|+++......+
T Consensus 265 ---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~~~ 311 (317)
T 2buj_A 265 ---------SIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPGQ 311 (317)
T ss_dssp ----------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCCC-
T ss_pred ---------CCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCCCC
Confidence 00111122346778888999999999999999999999987655433
No 103
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=1e-39 Score=342.66 Aligned_cols=240 Identities=19% Similarity=0.295 Sum_probs=190.1
Q ss_pred hhccccccCceeEEEEEec-CCcEEEEEEecccccC----HHHHHHHHHHHhcc-CCCccccccEEEEeCCceEEEEEec
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAVG----KREFEMQMEVLGKI-KHDNVVPLRAFYYSKDEKLLVYDYM 423 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~----~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e~~ 423 (654)
..+.||+|+||.||+|... +|+.||+|++++.... .+.+.+|..++.++ +||||+++++++.+.+..++||||+
T Consensus 13 ~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~~ 92 (345)
T 3a8x_A 13 LLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYV 92 (345)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC
T ss_pred EEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeCC
Confidence 3578999999999999965 5889999999765322 34577899999887 8999999999999999999999999
Q ss_pred CCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCC----
Q 036334 424 PAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN---- 499 (654)
Q Consensus 424 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~---- 499 (654)
++|+|.+++... ..+++..++.++.|++.||+|||+++ |+||||||+|||++.++++||+|||++.....
T Consensus 93 ~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~~ 166 (345)
T 3a8x_A 93 NGGDLMFHMQRQ-----RKLPEEHARFYSAEISLALNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT 166 (345)
T ss_dssp CSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTCC
T ss_pred CCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCHHHEEECCCCCEEEEeccccccccCCCCc
Confidence 999999999742 35899999999999999999999998 99999999999999999999999999976422
Q ss_pred CCCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCC--ChhHHHHHHhhhchhhhhhhHhhhc
Q 036334 500 TTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGI--DLPRWVQSVVREEWTAEVFDVELMR 577 (654)
Q Consensus 500 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 577 (654)
.....+++.|+|||++.+..++.++|||||||++|||++|+.||......+.. .....+...+.... .
T Consensus 167 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~--------~-- 236 (345)
T 3a8x_A 167 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ--------I-- 236 (345)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCC--------C--
T ss_pred ccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCC--------C--
Confidence 23346788899999999999999999999999999999999999753221111 11111111111110 0
Q ss_pred cCChHHHHHHHHHHHhhccCCCCCCCCCH
Q 036334 578 YHNIEEEMVQLLQIAMGCVSTVPDQRPAM 606 (654)
Q Consensus 578 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~ 606 (654)
........++.+++.+||+.||++||++
T Consensus 237 -~~p~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 237 -RIPRSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp -CCCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred -CCCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 0011122356678889999999999995
No 104
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=9.1e-40 Score=342.86 Aligned_cols=256 Identities=23% Similarity=0.389 Sum_probs=200.7
Q ss_pred HhhccccccCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHhc--cCCCccccccEEEEeCC----ceEEEEEe
Q 036334 349 ASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGK--IKHDNVVPLRAFYYSKD----EKLLVYDY 422 (654)
Q Consensus 349 ~~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~--l~hpniv~l~~~~~~~~----~~~lv~e~ 422 (654)
.+.+.||+|+||.||+|... |+.||||++... ....+.+|++++.. ++||||+++++++.... ..++||||
T Consensus 45 ~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~--~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~ 121 (342)
T 1b6c_B 45 VLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDY 121 (342)
T ss_dssp EEEEEEEEETTEEEEEEEET-TEEEEEEEECGG--GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECC
T ss_pred EEEeeecCCCCcEEEEEEEc-CccEEEEEeCch--hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEee
Confidence 34688999999999999985 899999998654 34567778888776 78999999999998776 78999999
Q ss_pred cCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhh--------ccCCeecCCCCCCcEEECCCCCeEEeccCCC
Q 036334 423 MPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLH--------VSGKIVHGNIKASNILLRPDHDACVSDFGLN 494 (654)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH--------~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla 494 (654)
+++|+|.+++.. ..+++..++.++.|++.||+||| +.+ |+||||||+||+++.++.+||+|||++
T Consensus 122 ~~~g~L~~~l~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~-ivH~Dlkp~NIll~~~~~~kL~Dfg~~ 194 (342)
T 1b6c_B 122 HEHGSLFDYLNR------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLA 194 (342)
T ss_dssp CTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE-EECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred cCCCcHHHHHhc------cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC-eeeCCCCHHHEEECCCCCEEEEECCCc
Confidence 999999999973 24899999999999999999999 676 999999999999999999999999998
Q ss_pred CCcCCC--------CCCCccccccCccccCCC------CCCcchhHHHHHHHHHHHHhC----------CCCCCCCCCCC
Q 036334 495 PLFGNT--------TPPTRVAGYRAPEVVETR------KVTFKSDVYSFGVLLLELLTG----------KAPNQASLGEE 550 (654)
Q Consensus 495 ~~~~~~--------~~~~~~~~y~aPE~~~~~------~~~~~~DvwslGvil~el~tg----------~~pf~~~~~~~ 550 (654)
...... ....++..|+|||++.+. .++.++|||||||++|||++| ..||......+
T Consensus 195 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~ 274 (342)
T 1b6c_B 195 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 274 (342)
T ss_dssp EEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCc
Confidence 765432 234577889999998765 234789999999999999999 67776543222
Q ss_pred CCChhHHHHHHhhhchhhhhhhHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCC
Q 036334 551 GIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGE 620 (654)
Q Consensus 551 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 620 (654)
.....+......... .+.+.......+....+.+++.+||+.||++|||++|+++.|+++.++.
T Consensus 275 -~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~ 338 (342)
T 1b6c_B 275 -PSVEEMRKVVCEQKL-----RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 338 (342)
T ss_dssp -CCHHHHHHHHTTSCC-----CCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred -ccHHHHHHHHHHHHh-----CCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence 112222222211111 1111111112355667889999999999999999999999999998764
No 105
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=1.2e-39 Score=334.42 Aligned_cols=251 Identities=20% Similarity=0.287 Sum_probs=190.5
Q ss_pred hhccccccCceeEEEEEec-CCcEEEEEEecccccC---HHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCC
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAVG---KREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPA 425 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~ 425 (654)
..+.||+|+||+||+|... +|+.||||+++..... ...+.+|+.++++++||||+++++++.+++..++||||+++
T Consensus 6 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 85 (292)
T 3o0g_A 6 KLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ 85 (292)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred eeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecCCC
Confidence 3578999999999999965 5899999999754332 36788999999999999999999999999999999999976
Q ss_pred CchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC----C
Q 036334 426 GSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT----T 501 (654)
Q Consensus 426 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~----~ 501 (654)
++.+.+... ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++...... .
T Consensus 86 -~l~~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lH~~~-ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 159 (292)
T 3o0g_A 86 -DLKKYFDSC----NGDLDPEIVKSFLFQLLKGLGFCHSRN-VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYS 159 (292)
T ss_dssp -EHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCCC
T ss_pred -CHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEeecccceecCCcccccc
Confidence 555555432 345999999999999999999999998 999999999999999999999999999766432 2
Q ss_pred CCCccccccCccccCCCC-CCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhh---chhh---hhhh--
Q 036334 502 PPTRVAGYRAPEVVETRK-VTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVRE---EWTA---EVFD-- 572 (654)
Q Consensus 502 ~~~~~~~y~aPE~~~~~~-~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~---~~~~---~~~~-- 572 (654)
...++..|+|||++.+.. ++.++|||||||++|||++|+.||..... ....+..+... .... ....
T Consensus 160 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~-----~~~~~~~i~~~~~~~~~~~~~~~~~~~ 234 (292)
T 3o0g_A 160 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND-----VDDQLKRIFRLLGTPTEEQWPSMTKLP 234 (292)
T ss_dssp SCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSS-----HHHHHHHHHHHHCCCCTTTCTTGGGST
T ss_pred CCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCC-----HHHHHHHHHHHhCCCChhhhhhhcccc
Confidence 345677899999997755 89999999999999999999888643221 11222222110 0000 0000
Q ss_pred -H--------hhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 036334 573 -V--------ELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVR 611 (654)
Q Consensus 573 -~--------~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 611 (654)
. .............++.+++.+||+.||++|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 235 DYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp TCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 0 00000001112345667888999999999999999986
No 106
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=7.4e-40 Score=347.49 Aligned_cols=242 Identities=24% Similarity=0.363 Sum_probs=192.5
Q ss_pred hccccccCceeEEEEEec-CCcEEEEEEecccc-cCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCCCch
Q 036334 351 AEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVA-VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSL 428 (654)
Q Consensus 351 ~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g~L 428 (654)
.++||+|+||.||+|... +|+.||+|+++... ...+++.+|++++++++||||+++++++.+.+..++||||+++|+|
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 367999999999999864 68999999997653 3456789999999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEE--CCCCCeEEeccCCCCCcCCC---CCC
Q 036334 429 SALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILL--RPDHDACVSDFGLNPLFGNT---TPP 503 (654)
Q Consensus 429 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll--~~~~~~kl~Dfgla~~~~~~---~~~ 503 (654)
.+++... ...+++..++.++.|++.||+|||+.+ |+||||||+|||+ +.++.+||+|||++...... ...
T Consensus 174 ~~~l~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~~~ 248 (373)
T 2x4f_A 174 FDRIIDE----SYNLTELDTILFMKQICEGIRHMHQMY-ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVN 248 (373)
T ss_dssp HHHHHHT----GGGCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCCCC
T ss_pred HHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCCHHHEEEecCCCCcEEEEeCCCceecCCccccccc
Confidence 9988643 235899999999999999999999998 9999999999999 56788999999999876543 234
Q ss_pred CccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccCChHH
Q 036334 504 TRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEE 583 (654)
Q Consensus 504 ~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 583 (654)
.+++.|+|||++.+..++.++|||||||++|||++|+.||..... ...+..+....+... .. ... .
T Consensus 249 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~------~~~~~~i~~~~~~~~--~~---~~~---~ 314 (373)
T 2x4f_A 249 FGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDND------AETLNNILACRWDLE--DE---EFQ---D 314 (373)
T ss_dssp CSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHHTCCCSC--SG---GGT---T
T ss_pred cCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHhccCCCC--hh---hhc---c
Confidence 578889999999988999999999999999999999999975322 222333332222110 00 011 1
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 036334 584 EMVQLLQIAMGCVSTVPDQRPAMQEVVR 611 (654)
Q Consensus 584 ~~~~l~~l~~~cl~~dP~~RPs~~evl~ 611 (654)
...++.+++.+||+.||++|||++|+++
T Consensus 315 ~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 315 ISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp SCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 1235677888999999999999999987
No 107
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=3.3e-39 Score=331.41 Aligned_cols=255 Identities=16% Similarity=0.197 Sum_probs=200.9
Q ss_pred hhccccccCceeEEEEEe-cCCcEEEEEEecccccCHHHHHHHHHHHhccCCCccccccEEE-EeCCceEEEEEecCCCc
Q 036334 350 SAEVLGKGSVGTSYKAVL-EEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFY-YSKDEKLLVYDYMPAGS 427 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~-~~~~~~~lv~e~~~~g~ 427 (654)
+.+.||+|+||.||+|.. .+|+.||||++.... ...++.+|+.++++++|++++..+.++ ...+..++||||+ +++
T Consensus 13 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~ 90 (296)
T 3uzp_A 13 LGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPS 90 (296)
T ss_dssp EEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS-SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCB
T ss_pred EEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc-chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec-CCC
Confidence 357899999999999996 568999999986543 335688999999999999887777766 4566779999999 999
Q ss_pred hhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEE---CCCCCeEEeccCCCCCcCCC----
Q 036334 428 LSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILL---RPDHDACVSDFGLNPLFGNT---- 500 (654)
Q Consensus 428 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll---~~~~~~kl~Dfgla~~~~~~---- 500 (654)
|.+++... ...+++..++.++.|++.||+|||+++ |+||||||+||++ +.++.+||+|||++......
T Consensus 91 L~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~ 165 (296)
T 3uzp_A 91 LEDLFNFC----SRKFSLKTVLLLADQMISRIEYIHSKN-FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQ 165 (296)
T ss_dssp HHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCC
T ss_pred HHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccccccc
Confidence 99999743 245999999999999999999999998 9999999999999 47889999999998765432
Q ss_pred -------CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhH
Q 036334 501 -------TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDV 573 (654)
Q Consensus 501 -------~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 573 (654)
....++..|+|||++.+..++.++|||||||++|||++|+.||..............+......... .
T Consensus 166 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-----~ 240 (296)
T 3uzp_A 166 HIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI-----E 240 (296)
T ss_dssp BCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH-----H
T ss_pred ccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCch-----H
Confidence 2345677899999999999999999999999999999999999875443332222222111000000 0
Q ss_pred hhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCCC
Q 036334 574 ELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGET 621 (654)
Q Consensus 574 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 621 (654)
.+ . .....++.+++.+||+.||++|||++++++.|+++.....
T Consensus 241 ~~--~---~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~ 283 (296)
T 3uzp_A 241 VL--C---KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp HH--T---TTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred HH--H---hhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcC
Confidence 00 0 1112457788889999999999999999999999976543
No 108
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=5e-40 Score=341.36 Aligned_cols=259 Identities=24% Similarity=0.376 Sum_probs=186.9
Q ss_pred HhhccccccCceeEEEEEec-CCcEEEEEEecccc--cCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCC
Q 036334 349 ASAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVA--VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPA 425 (654)
Q Consensus 349 ~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~ 425 (654)
...+.||+|+||.||+|... +|+.||+|+++... .....+.+|++++++++||||+++++++.+++..++||||++
T Consensus 8 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~- 86 (317)
T 2pmi_A 8 KQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMD- 86 (317)
T ss_dssp -----------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECCC-
T ss_pred eEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEecC-
Confidence 34578999999999999864 58999999987543 234678899999999999999999999999999999999997
Q ss_pred CchhhhhccCC-CCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC----
Q 036334 426 GSLSALLHGSR-GSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT---- 500 (654)
Q Consensus 426 g~L~~~l~~~~-~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~---- 500 (654)
|+|.+++.... ......+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 87 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 165 (317)
T 2pmi_A 87 NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK-ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTF 165 (317)
T ss_dssp CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCSSCEETTSCCCCC
T ss_pred CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCChHHeEEcCCCCEEECcCccceecCCCcccC
Confidence 59999886432 112345899999999999999999999998 999999999999999999999999999765432
Q ss_pred CCCCccccccCccccCC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhh---chhhhh-----h
Q 036334 501 TPPTRVAGYRAPEVVET-RKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVRE---EWTAEV-----F 571 (654)
Q Consensus 501 ~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~-----~ 571 (654)
....++..|+|||++.+ ..++.++|||||||++|||++|+.||......+ ....+...... ...... .
T Consensus 166 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~ 242 (317)
T 2pmi_A 166 SSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEE---QLKLIFDIMGTPNESLWPSVTKLPKY 242 (317)
T ss_dssp CCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCSCCTTTCGGGGGCTTC
T ss_pred CCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH---HHHHHHHHhCCCChhHhhhhhhhhhc
Confidence 23456788999999876 468999999999999999999999997543211 11111111000 000000 0
Q ss_pred hHhh-----------hccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 036334 572 DVEL-----------MRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRM 612 (654)
Q Consensus 572 ~~~~-----------~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 612 (654)
.... ...........++.+++.+||+.||++|||++|+++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 243 NPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp CTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred ccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 0000 0000001122357788889999999999999999863
No 109
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=1.8e-40 Score=346.16 Aligned_cols=256 Identities=25% Similarity=0.391 Sum_probs=199.2
Q ss_pred hhccccccCceeEEEEEe-----cCCcEEEEEEecccc-cCHHHHHHHHHHHhccCCCccccccEEEEe--CCceEEEEE
Q 036334 350 SAEVLGKGSVGTSYKAVL-----EEGTTVVVKRLKEVA-VGKREFEMQMEVLGKIKHDNVVPLRAFYYS--KDEKLLVYD 421 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~-----~~g~~vavK~~~~~~-~~~~~~~~e~~~l~~l~hpniv~l~~~~~~--~~~~~lv~e 421 (654)
+.+.||+|+||.||+|.+ .+++.||||++.... ...+.+.+|++++++++||||+++++++.. ....++|||
T Consensus 27 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e 106 (327)
T 3lxl_A 27 YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVME 106 (327)
T ss_dssp EEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEEEE
T ss_pred hhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEEEe
Confidence 457899999999999984 358899999997653 334568999999999999999999999874 456899999
Q ss_pred ecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC-
Q 036334 422 YMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT- 500 (654)
Q Consensus 422 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~- 500 (654)
|+++++|.+++... ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++......
T Consensus 107 ~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 181 (327)
T 3lxl_A 107 YLPSGCLRDFLQRH----RARLDASRLLLYSSQICKGMEYLGSRR-CVHRDLAARNILVESEAHVKIADFGLAKLLPLDK 181 (327)
T ss_dssp CCTTCBHHHHHHHH----GGGCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCGGGCEECCTTC
T ss_pred ecCCCCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCChhhEEECCCCCEEEcccccceecccCC
Confidence 99999999999743 235899999999999999999999998 999999999999999999999999999866432
Q ss_pred ------CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCC--------CCCChhHHHHHHhhhch
Q 036334 501 ------TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGE--------EGIDLPRWVQSVVREEW 566 (654)
Q Consensus 501 ------~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~--------~~~~~~~~~~~~~~~~~ 566 (654)
....++..|+|||++.+..++.++||||||+++|||++|+.||...... ........+........
T Consensus 182 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (327)
T 3lxl_A 182 DYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQ 261 (327)
T ss_dssp SEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTC
T ss_pred ccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhccc
Confidence 2234566699999998888999999999999999999999998643211 00000000000110000
Q ss_pred hhhhhhHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCC
Q 036334 567 TAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGE 620 (654)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 620 (654)
...........+.+++.+||+.||++|||++|+++.|+.+....
T Consensus 262 ----------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 305 (327)
T 3lxl_A 262 ----------RLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGS 305 (327)
T ss_dssp ----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC----
T ss_pred ----------CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 11112223346778888999999999999999999999997665
No 110
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=7e-40 Score=344.47 Aligned_cols=237 Identities=16% Similarity=0.194 Sum_probs=196.9
Q ss_pred hccccccCceeEEEEEec-CCcEEEEEEecccc----cCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCC
Q 036334 351 AEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVA----VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPA 425 (654)
Q Consensus 351 ~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~ 425 (654)
.+.||+|+||.||+|... +|+.||+|++.... ...+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 46 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g 125 (350)
T 1rdq_E 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125 (350)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred EEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCC
Confidence 478999999999999965 58999999997542 3346788899999999999999999999999999999999999
Q ss_pred CchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC-CCCC
Q 036334 426 GSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT-TPPT 504 (654)
Q Consensus 426 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~-~~~~ 504 (654)
|+|.+++... ..+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++...... ....
T Consensus 126 g~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~~~~~ 199 (350)
T 1rdq_E 126 GEMFSHLRRI-----GRFSEPHARFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLC 199 (350)
T ss_dssp CBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCCCE
T ss_pred CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCccceEEECCCCCEEEcccccceeccCCccccc
Confidence 9999999742 35899999999999999999999998 999999999999999999999999999876543 3456
Q ss_pred ccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccCChHHH
Q 036334 505 RVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEE 584 (654)
Q Consensus 505 ~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 584 (654)
+++.|+|||++.+..++.++|||||||++|||++|+.||.... .......+..... ......
T Consensus 200 gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~------~~~~~~~i~~~~~------------~~p~~~ 261 (350)
T 1rdq_E 200 GTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ------PIQIYEKIVSGKV------------RFPSHF 261 (350)
T ss_dssp ECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHCCC------------CCCTTC
T ss_pred CCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCC------HHHHHHHHHcCCC------------CCCCCC
Confidence 7888999999999999999999999999999999999997532 1222222222111 001112
Q ss_pred HHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 036334 585 MVQLLQIAMGCVSTVPDQRPA-----MQEVVR 611 (654)
Q Consensus 585 ~~~l~~l~~~cl~~dP~~RPs-----~~evl~ 611 (654)
..++.+++.+||+.||++||+ ++|+++
T Consensus 262 ~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 262 SSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp CHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred CHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 235677888999999999998 787765
No 111
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=1.1e-39 Score=335.51 Aligned_cols=251 Identities=25% Similarity=0.354 Sum_probs=196.4
Q ss_pred hhccccccCceeEEEEEecC----CcEEEEEEeccccc--CHHHHHHHHHHHhccCCCccccccEEEEe-CCceEEEEEe
Q 036334 350 SAEVLGKGSVGTSYKAVLEE----GTTVVVKRLKEVAV--GKREFEMQMEVLGKIKHDNVVPLRAFYYS-KDEKLLVYDY 422 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~~----g~~vavK~~~~~~~--~~~~~~~e~~~l~~l~hpniv~l~~~~~~-~~~~~lv~e~ 422 (654)
+.++||+|+||.||+|...+ ...||+|.+..... ..+.+.+|+.++++++||||+++++++.. ++..++||||
T Consensus 29 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~ 108 (298)
T 3f66_A 29 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPY 108 (298)
T ss_dssp EEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEEC
T ss_pred hcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEEeC
Confidence 45789999999999998543 23689999875432 34568899999999999999999998654 5578999999
Q ss_pred cCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC--
Q 036334 423 MPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT-- 500 (654)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~-- 500 (654)
+++|+|.+++... ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++......
T Consensus 109 ~~~~~L~~~l~~~----~~~~~~~~~~~i~~ql~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~ 183 (298)
T 3f66_A 109 MKHGDLRNFIRNE----THNPTVKDLIGFGLQVAKGMKYLASKK-FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 183 (298)
T ss_dssp CTTCBHHHHHHCT----TCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGG
T ss_pred CCCCCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCchheEEECCCCCEEECcccccccccccch
Confidence 9999999999743 345899999999999999999999998 999999999999999999999999999765432
Q ss_pred ------CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhC-CCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhH
Q 036334 501 ------TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTG-KAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDV 573 (654)
Q Consensus 501 ------~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 573 (654)
....++..|+|||.+.+..++.++||||||+++|||++| .+||......+ .. ........
T Consensus 184 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~---~~---~~~~~~~~------- 250 (298)
T 3f66_A 184 YSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---IT---VYLLQGRR------- 250 (298)
T ss_dssp CBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTT---HH---HHHHTTCC-------
T ss_pred hccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHH---HH---HHHhcCCC-------
Confidence 223445679999999989999999999999999999995 55554432211 11 11111110
Q ss_pred hhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCCCC
Q 036334 574 ELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGETD 622 (654)
Q Consensus 574 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 622 (654)
..........+.+++.+||+.||++|||++|+++.|+++...-..
T Consensus 251 ----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~~ 295 (298)
T 3f66_A 251 ----LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 295 (298)
T ss_dssp ----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSCC
T ss_pred ----CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 000111223577888899999999999999999999999876443
No 112
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1.1e-39 Score=337.87 Aligned_cols=254 Identities=24% Similarity=0.364 Sum_probs=192.9
Q ss_pred HhhccccccCceeEEEEEec----CCcEEEEEEecccccC---HHHHHHHHHHHhccCCCccccccEEEEeCCc-----e
Q 036334 349 ASAEVLGKGSVGTSYKAVLE----EGTTVVVKRLKEVAVG---KREFEMQMEVLGKIKHDNVVPLRAFYYSKDE-----K 416 (654)
Q Consensus 349 ~~~~~lg~G~fg~Vy~~~~~----~g~~vavK~~~~~~~~---~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~-----~ 416 (654)
.+.+.||+|+||.||+|... .+..||+|+++..... .+.+.+|+.++++++||||+++++++.+.+. .
T Consensus 37 ~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 116 (313)
T 3brb_A 37 ILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKP 116 (313)
T ss_dssp EEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------CE
T ss_pred eeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCccc
Confidence 44678999999999999854 2458999999765333 3568899999999999999999999987553 4
Q ss_pred EEEEEecCCCchhhhhccCCC-CCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCC
Q 036334 417 LLVYDYMPAGSLSALLHGSRG-SGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNP 495 (654)
Q Consensus 417 ~lv~e~~~~g~L~~~l~~~~~-~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~ 495 (654)
++||||+++|+|.+++...+. .....+++..++.++.|++.||.|||+++ |+||||||+||+++.++.+||+|||++.
T Consensus 117 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dikp~NIli~~~~~~kl~Dfg~~~ 195 (313)
T 3brb_A 117 MVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN-FLHRDLAARNCMLRDDMTVCVADFGLSK 195 (313)
T ss_dssp EEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT-CCCCCCSGGGEEECTTSCEEECSCSCC-
T ss_pred EEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCcceEEEcCCCcEEEeecCcce
Confidence 999999999999999853321 13456999999999999999999999998 9999999999999999999999999987
Q ss_pred CcCCC------CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhchhh
Q 036334 496 LFGNT------TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTA 568 (654)
Q Consensus 496 ~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (654)
..... ....++..|+|||.+.+..++.++||||||+++|||++ |..||......+ ..........
T Consensus 196 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~------~~~~~~~~~~-- 267 (313)
T 3brb_A 196 KIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE------MYDYLLHGHR-- 267 (313)
T ss_dssp ---------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG------HHHHHHTTCC--
T ss_pred ecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHH------HHHHHHcCCC--
Confidence 65432 22344567999999999999999999999999999999 888986543211 1111111110
Q ss_pred hhhhHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCC
Q 036334 569 EVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGE 620 (654)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 620 (654)
..........+.+++.+||+.||++|||+.++++.|+++.+.-
T Consensus 268 ---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~l 310 (313)
T 3brb_A 268 ---------LKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL 310 (313)
T ss_dssp ---------CCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred ---------CCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence 0111222346778888999999999999999999999987643
No 113
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.1e-39 Score=349.52 Aligned_cols=265 Identities=19% Similarity=0.283 Sum_probs=206.5
Q ss_pred hhccccccCceeEEEEEec-CCcEEEEEEecccc--cCHHHHHHHHHHHhccCCCccccccEEEEeCC--ceEEEEEecC
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVA--VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKD--EKLLVYDYMP 424 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~--~~~lv~e~~~ 424 (654)
+.++||+|+||+||+|... +|+.||||+++... ...+.+.+|++++++++||||+++++++...+ ..++||||++
T Consensus 13 i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~~ 92 (396)
T 4eut_A 13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCP 92 (396)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECCCT
T ss_pred EEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEecCC
Confidence 3578999999999999976 48999999997643 34567889999999999999999999998765 6799999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEE----CCCCCeEEeccCCCCCcCCC
Q 036334 425 AGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILL----RPDHDACVSDFGLNPLFGNT 500 (654)
Q Consensus 425 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll----~~~~~~kl~Dfgla~~~~~~ 500 (654)
+|+|.+++.... ....+++..++.++.|++.||+|||+++ |+||||||+|||+ +.++.+||+|||++......
T Consensus 93 ~g~L~~~l~~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~ 169 (396)
T 4eut_A 93 CGSLYTVLEEPS--NAYGLPESEFLIVLRDVVGGMNHLRENG-IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD 169 (396)
T ss_dssp TEEHHHHTTSGG--GTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCG
T ss_pred CCCHHHHHHhhh--cccCCCHHHHHHHHHHHHHHHHHHHHCC-EEECCcCHHHEEEeecCCCceeEEEecCCCceEccCC
Confidence 999999997543 1234899999999999999999999998 9999999999999 77778999999999876543
Q ss_pred ---CCCCccccccCccccCC--------CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhh
Q 036334 501 ---TPPTRVAGYRAPEVVET--------RKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAE 569 (654)
Q Consensus 501 ---~~~~~~~~y~aPE~~~~--------~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 569 (654)
....++..|+|||++.+ ..++.++|||||||++|||++|+.||....... .....+..+........
T Consensus 170 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~--~~~~~~~~~~~~~p~~~ 247 (396)
T 4eut_A 170 EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPR--RNKEVMYKIITGKPSGA 247 (396)
T ss_dssp GGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTT--TCHHHHHHHHHSCCTTC
T ss_pred CccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCccc--chHHHHHHHhcCCCccc
Confidence 23457788999999864 567889999999999999999999997543322 11222233322211000
Q ss_pred h----------h--hHhhh-ccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcC
Q 036334 570 V----------F--DVELM-RYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRG 619 (654)
Q Consensus 570 ~----------~--~~~~~-~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 619 (654)
. + ...+. ...........+.+++.+||+.||++||+++|+++.++++...
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 248 ISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp CEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred chhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 0 0 00000 0112245566788899999999999999999999999988654
No 114
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1.6e-39 Score=341.72 Aligned_cols=244 Identities=24% Similarity=0.337 Sum_probs=197.6
Q ss_pred HHhhccccccCceeEEEEEe-cCCcEEEEEEeccccc----CHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEe
Q 036334 348 RASAEVLGKGSVGTSYKAVL-EEGTTVVVKRLKEVAV----GKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDY 422 (654)
Q Consensus 348 ~~~~~~lg~G~fg~Vy~~~~-~~g~~vavK~~~~~~~----~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 422 (654)
+...+.||+|+||+||+|.. .+|+.||||++..... ..+++.+|++++++++||||+++++++.+++..++||||
T Consensus 56 y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 135 (348)
T 1u5q_A 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY 135 (348)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred eeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEec
Confidence 34457899999999999995 5689999999875422 235688999999999999999999999999999999999
Q ss_pred cCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCCCC
Q 036334 423 MPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTP 502 (654)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 502 (654)
+. |+|.+++... ...+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++........
T Consensus 136 ~~-g~l~~~l~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~ 209 (348)
T 1u5q_A 136 CL-GSASDLLEVH----KKPLQEVEIAAVTHGALQGLAYLHSHN-MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANS 209 (348)
T ss_dssp CS-EEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCC
T ss_pred CC-CCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEECCCCCEEEeeccCceecCCCCc
Confidence 97 6888887532 345899999999999999999999998 99999999999999999999999999988877667
Q ss_pred CCccccccCccccC---CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccC
Q 036334 503 PTRVAGYRAPEVVE---TRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYH 579 (654)
Q Consensus 503 ~~~~~~y~aPE~~~---~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 579 (654)
..++..|+|||++. ...++.++|||||||++|||++|+.||.... ....+..+...... . .
T Consensus 210 ~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~------~~~~~~~~~~~~~~-~---------~ 273 (348)
T 1u5q_A 210 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN------AMSALYHIAQNESP-A---------L 273 (348)
T ss_dssp CCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC------HHHHHHHHHHSCCC-C---------C
T ss_pred ccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHhcCCC-C---------C
Confidence 78889999999984 5678999999999999999999999986532 11222222211110 0 0
Q ss_pred ChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 036334 580 NIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMI 613 (654)
Q Consensus 580 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 613 (654)
........+.+++.+||+.||++|||++++++..
T Consensus 274 ~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~ 307 (348)
T 1u5q_A 274 QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHR 307 (348)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCH
T ss_pred CCCCCCHHHHHHHHHHcccChhhCcCHHHHhhCh
Confidence 0111223566788899999999999999998653
No 115
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=5.1e-40 Score=340.30 Aligned_cols=251 Identities=23% Similarity=0.337 Sum_probs=192.1
Q ss_pred hhccccccCceeEEEEEe-cCCcEEEEEEecccccC----HHHHHHHHHHHhccCCCccccccEEEEeCCce----EEEE
Q 036334 350 SAEVLGKGSVGTSYKAVL-EEGTTVVVKRLKEVAVG----KREFEMQMEVLGKIKHDNVVPLRAFYYSKDEK----LLVY 420 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~----~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~----~lv~ 420 (654)
+.+.||+|+||.||+|.. .+++.||||+++..... ...+.+|+.++++++||||+++++++...... ++||
T Consensus 16 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~ 95 (311)
T 3ork_A 16 LGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVM 95 (311)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEEEE
Confidence 357899999999999995 56899999999765322 24678899999999999999999998765543 9999
Q ss_pred EecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC
Q 036334 421 DYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT 500 (654)
Q Consensus 421 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~ 500 (654)
||+++|+|.+++.. ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++......
T Consensus 96 e~~~g~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~ 169 (311)
T 3ork_A 96 EYVDGVTLRDIVHT-----EGPMTPKRAIEVIADACQALNFSHQNG-IIHRDVKPANIMISATNAVKVMDFGIARAIADS 169 (311)
T ss_dssp ECCCEEEHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEETTSCEEECCCSCC------
T ss_pred ecCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-CCcCCCCHHHEEEcCCCCEEEeeccCccccccc
Confidence 99999999999974 245899999999999999999999998 999999999999999999999999999765432
Q ss_pred -------CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhH
Q 036334 501 -------TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDV 573 (654)
Q Consensus 501 -------~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 573 (654)
....++..|+|||++.+..++.++|||||||++|||++|+.||..... .............. .
T Consensus 170 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~------~~~~~~~~~~~~~~----~ 239 (311)
T 3ork_A 170 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP------VSVAYQHVREDPIP----P 239 (311)
T ss_dssp ------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH------HHHHHHHHHCCCCC----H
T ss_pred ccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh------HHHHHHHhcCCCCC----c
Confidence 123467889999999999999999999999999999999999975321 11122222111110 0
Q ss_pred hhhccCChHHHHHHHHHHHhhccCCCCCCCCC-HHHHHHHHHhhhcCC
Q 036334 574 ELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPA-MQEVVRMIENMNRGE 620 (654)
Q Consensus 574 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-~~evl~~L~~~~~~~ 620 (654)
.. ... ....++.+++.+||+.||++||+ ++++.+.+.++....
T Consensus 240 ~~-~~~---~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~~ 283 (311)
T 3ork_A 240 SA-RHE---GLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGE 283 (311)
T ss_dssp HH-HST---TCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHTTC
T ss_pred cc-ccC---CCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhcCC
Confidence 00 011 12235677888999999999995 555666777766543
No 116
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.3e-40 Score=342.65 Aligned_cols=247 Identities=26% Similarity=0.409 Sum_probs=193.2
Q ss_pred hhccccccCceeEEEEEec-CCc----EEEEEEeccc--ccCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEe
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGT----TVVVKRLKEV--AVGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDY 422 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~----~vavK~~~~~--~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 422 (654)
..+.||+|+||.||+|.+. +++ +||+|.+... ....+++.+|+.++++++||||+++++++..+ ..++|+||
T Consensus 19 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-~~~~v~~~ 97 (327)
T 3lzb_A 19 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQL 97 (327)
T ss_dssp EEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESS-SEEEEECC
T ss_pred EEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecC-CceEEEEe
Confidence 3578999999999999854 344 3577777543 23467889999999999999999999999865 48899999
Q ss_pred cCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCCC-
Q 036334 423 MPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTT- 501 (654)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~- 501 (654)
+.+|+|.+++... ...+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++.......
T Consensus 98 ~~~g~L~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~ 172 (327)
T 3lzb_A 98 MPFGCLLDYVREH----KDNIGSQYLLNWCVQIAKGMNYLEDRR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 172 (327)
T ss_dssp CSSCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEEETTEEEECCTTC---------
T ss_pred cCCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHhhCC-CcCCCCCHHHEEEcCCCCEEEccCcceeEccCccc
Confidence 9999999999753 345899999999999999999999998 9999999999999999999999999998764321
Q ss_pred -----CCCccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhh
Q 036334 502 -----PPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVEL 575 (654)
Q Consensus 502 -----~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 575 (654)
...++..|+|||++.+..++.++|||||||++|||++ |+.||......+ +...+....
T Consensus 173 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~-------~~~~~~~~~--------- 236 (327)
T 3lzb_A 173 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE-------ISSILEKGE--------- 236 (327)
T ss_dssp -------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG-------HHHHHHTTC---------
T ss_pred cccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH-------HHHHHHcCC---------
Confidence 2234557999999999999999999999999999999 999997543221 111111111
Q ss_pred hccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcC
Q 036334 576 MRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRG 619 (654)
Q Consensus 576 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 619 (654)
..........++.+++.+||+.||++|||+.|+++.|+++...
T Consensus 237 -~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 237 -RLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp -CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred -CCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 0011112233577888899999999999999999999998754
No 117
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=1.7e-39 Score=345.84 Aligned_cols=245 Identities=23% Similarity=0.375 Sum_probs=197.8
Q ss_pred HhhccccccCceeEEEEEec-CCcEEEEEEecccc-cCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCCC
Q 036334 349 ASAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVA-VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAG 426 (654)
Q Consensus 349 ~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g 426 (654)
.+.+.||+|+||.||+|... +|+.||+|++.... .....+.+|++++++++||||+++++++.+.+..++||||+++|
T Consensus 54 ~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~gg 133 (387)
T 1kob_A 54 DILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGG 133 (387)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCCC
T ss_pred EEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCCCC
Confidence 34578999999999999965 58899999987543 34457889999999999999999999999999999999999999
Q ss_pred chhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECC--CCCeEEeccCCCCCcCCCC---
Q 036334 427 SLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRP--DHDACVSDFGLNPLFGNTT--- 501 (654)
Q Consensus 427 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~--~~~~kl~Dfgla~~~~~~~--- 501 (654)
+|.+++... ...+++..++.++.|++.||+|||+++ |+||||||+|||++. ++.+||+|||++.......
T Consensus 134 ~L~~~l~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~ 208 (387)
T 1kob_A 134 ELFDRIAAE----DYKMSEAEVINYMRQACEGLKHMHEHS-IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVK 208 (387)
T ss_dssp BHHHHTTCT----TCCBCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEE
T ss_pred cHHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccchHHeEEecCCCCceEEEecccceecCCCccee
Confidence 999999742 235899999999999999999999998 999999999999974 4679999999998765432
Q ss_pred CCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccCCh
Q 036334 502 PPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNI 581 (654)
Q Consensus 502 ~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 581 (654)
...++..|+|||++.+..++.++|||||||++|||++|+.||..... ...+..+....+.. +. ...
T Consensus 209 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~------~~~~~~i~~~~~~~---~~-----~~~ 274 (387)
T 1kob_A 209 VTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD------LETLQNVKRCDWEF---DE-----DAF 274 (387)
T ss_dssp EECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH------HHHHHHHHHCCCCC---CS-----STT
T ss_pred eeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH------HHHHHHHHhCCCCC---Cc-----ccc
Confidence 23567889999999999999999999999999999999999975321 22222222221110 00 001
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 036334 582 EEEMVQLLQIAMGCVSTVPDQRPAMQEVVRM 612 (654)
Q Consensus 582 ~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 612 (654)
.....++.+++.+||+.||++|||+.|+++.
T Consensus 275 ~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 275 SSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp TTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred ccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 1122356778889999999999999999874
No 118
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=3.9e-40 Score=345.38 Aligned_cols=237 Identities=24% Similarity=0.310 Sum_probs=193.3
Q ss_pred hhccccccCceeEEEEEec-CCcEEEEEEeccc----ccCHHHHHHHHHHHhcc-CCCccccccEEEEeCCceEEEEEec
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEV----AVGKREFEMQMEVLGKI-KHDNVVPLRAFYYSKDEKLLVYDYM 423 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~----~~~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e~~ 423 (654)
+.++||+|+||+||+|... +|+.||+|+++.. ......+..|..++..+ +||||+++++++.+.+..++||||+
T Consensus 21 ~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E~~ 100 (345)
T 1xjd_A 21 LHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYL 100 (345)
T ss_dssp EEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECC
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEeCC
Confidence 3578999999999999975 5889999999764 23445677888888876 8999999999999999999999999
Q ss_pred CCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCC----
Q 036334 424 PAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN---- 499 (654)
Q Consensus 424 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~---- 499 (654)
++|+|.+++... ..+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++.....
T Consensus 101 ~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~ 174 (345)
T 1xjd_A 101 NGGDLMYHIQSC-----HKFDLSRATFYAAEIILGLQFLHSKG-IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK 174 (345)
T ss_dssp TTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCC
T ss_pred CCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCChhhEEECCCCCEEEeEChhhhhcccCCCc
Confidence 999999999742 35899999999999999999999998 99999999999999999999999999976432
Q ss_pred CCCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccC
Q 036334 500 TTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYH 579 (654)
Q Consensus 500 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 579 (654)
.....+|+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+..... . .
T Consensus 175 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~------~~~~~~i~~~~~-------~--~-- 237 (345)
T 1xjd_A 175 TNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE------EELFHSIRMDNP-------F--Y-- 237 (345)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHCCC-------C--C--
T ss_pred ccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH------HHHHHHHHhCCC-------C--C--
Confidence 2345678889999999999999999999999999999999999975321 122222221110 0 0
Q ss_pred ChHHHHHHHHHHHhhccCCCCCCCCCHH-HHH
Q 036334 580 NIEEEMVQLLQIAMGCVSTVPDQRPAMQ-EVV 610 (654)
Q Consensus 580 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~-evl 610 (654)
......++.+++.+||..||++||++. +++
T Consensus 238 -p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 238 -PRWLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp -CTTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred -CcccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 011123566778899999999999997 664
No 119
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=8.8e-40 Score=344.03 Aligned_cols=242 Identities=21% Similarity=0.326 Sum_probs=182.3
Q ss_pred hhccccccCceeEEEEEec-CCcEEEEEEecccccCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCCCch
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSL 428 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g~L 428 (654)
+.+.||+|+||.||+|... +++.||||+++... ..+.+.+|++++++++||||+++++++.+.+..++||||+++|+|
T Consensus 57 ~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 135 (349)
T 2w4o_A 57 VESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGEL 135 (349)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-----------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred EeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCCCCH
Confidence 3578999999999999976 47899999997643 346688899999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECC---CCCeEEeccCCCCCcCCC---CC
Q 036334 429 SALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRP---DHDACVSDFGLNPLFGNT---TP 502 (654)
Q Consensus 429 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~---~~~~kl~Dfgla~~~~~~---~~ 502 (654)
.+++.. ...+++..++.++.|++.||+|||+.+ |+||||||+|||++. ++.+||+|||++...... ..
T Consensus 136 ~~~l~~-----~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~ 209 (349)
T 2w4o_A 136 FDRIVE-----KGYYSERDAADAVKQILEAVAYLHENG-IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKT 209 (349)
T ss_dssp HHHHTT-----CSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEESSSSTTCCEEECCCC-------------
T ss_pred HHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCcccEEEecCCCCCCEEEccCccccccCccccccc
Confidence 999973 345899999999999999999999998 999999999999975 889999999999876543 23
Q ss_pred CCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccCChH
Q 036334 503 PTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIE 582 (654)
Q Consensus 503 ~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 582 (654)
..++..|+|||++.+..++.++|||||||++|||++|+.||...... ......+....... .. ....
T Consensus 210 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-----~~~~~~i~~~~~~~--~~------~~~~ 276 (349)
T 2w4o_A 210 VCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGD-----QFMFRRILNCEYYF--IS------PWWD 276 (349)
T ss_dssp ---CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCH-----HHHHHHHHTTCCCC--CT------TTTT
T ss_pred ccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCccc-----HHHHHHHHhCCCcc--CC------chhh
Confidence 45778899999999999999999999999999999999999653221 11122222111100 00 0011
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 036334 583 EEMVQLLQIAMGCVSTVPDQRPAMQEVVR 611 (654)
Q Consensus 583 ~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 611 (654)
+...++.+++.+||+.||++|||+.|+++
T Consensus 277 ~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 277 EVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp TSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred hCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 22335677888999999999999999986
No 120
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=2.7e-39 Score=346.45 Aligned_cols=243 Identities=21% Similarity=0.286 Sum_probs=186.2
Q ss_pred ccccccCceeEEEEEec-CCcEEEEEEecccccCHHHHHHHHHHH-hccCCCccccccEEEEe----CCceEEEEEecCC
Q 036334 352 EVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAVGKREFEMQMEVL-GKIKHDNVVPLRAFYYS----KDEKLLVYDYMPA 425 (654)
Q Consensus 352 ~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~e~~~l-~~l~hpniv~l~~~~~~----~~~~~lv~e~~~~ 425 (654)
++||+|+||+||++... +|+.||||+++. ...+.+|++++ +..+||||++++++|.. .+..++||||+++
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~g 143 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDG 143 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEC----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCS
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCc----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCCC
Confidence 67999999999999965 588999999864 24567788876 44589999999999875 5568999999999
Q ss_pred CchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECC---CCCeEEeccCCCCCcCCC--
Q 036334 426 GSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRP---DHDACVSDFGLNPLFGNT-- 500 (654)
Q Consensus 426 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~---~~~~kl~Dfgla~~~~~~-- 500 (654)
|+|.+++... ....+++..++.++.||+.||+|||+.+ |+||||||+|||++. ++.+||+|||++......
T Consensus 144 g~L~~~l~~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~ 219 (400)
T 1nxk_A 144 GELFSRIQDR---GDQAFTEREASEIMKSIGEAIQYLHSIN-IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS 219 (400)
T ss_dssp EEHHHHHHCC------CCBHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSSSTTCCEEECCCTTCEECC----
T ss_pred CcHHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCcCcceEEEecCCCCccEEEEecccccccCCCCc
Confidence 9999999753 2345999999999999999999999998 999999999999998 788999999999866433
Q ss_pred -CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccC
Q 036334 501 -TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYH 579 (654)
Q Consensus 501 -~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 579 (654)
....++..|+|||++.+..++.++|||||||++|||++|+.||.......... .....+....+. .....+
T Consensus 220 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~--~~~~~i~~~~~~-----~~~~~~- 291 (400)
T 1nxk_A 220 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP--GMKTRIRMGQYE-----FPNPEW- 291 (400)
T ss_dssp -------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCC--SHHHHHHHTCCC-----CCTTTT-
T ss_pred cccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccH--HHHHHHHcCccc-----CCCccc-
Confidence 33456788999999999999999999999999999999999997654332111 011111111110 000001
Q ss_pred ChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 036334 580 NIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRM 612 (654)
Q Consensus 580 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 612 (654)
.....++.+++.+||+.||++|||+.|+++.
T Consensus 292 --~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 292 --SEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp --TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred --ccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 1122356778889999999999999999875
No 121
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=7.4e-40 Score=342.58 Aligned_cols=235 Identities=22% Similarity=0.310 Sum_probs=193.9
Q ss_pred HHhhccccccCceeEEEEEe-cCCcEEEEEEeccccc---------CHHHHHHHHHHHhccCCCccccccEEEEeCCceE
Q 036334 348 RASAEVLGKGSVGTSYKAVL-EEGTTVVVKRLKEVAV---------GKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKL 417 (654)
Q Consensus 348 ~~~~~~lg~G~fg~Vy~~~~-~~g~~vavK~~~~~~~---------~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~ 417 (654)
|.+.+.||+|+||.||+|.. .+|+.||||+++.... ....+.+|+.++++++||||+++++++.+.+..+
T Consensus 26 y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~ 105 (335)
T 3dls_A 26 YSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQ 105 (335)
T ss_dssp EEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred eEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCEEE
Confidence 34567899999999999985 4688999999976532 2335778999999999999999999999999999
Q ss_pred EEEEecCCC-chhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCC
Q 036334 418 LVYDYMPAG-SLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPL 496 (654)
Q Consensus 418 lv~e~~~~g-~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~ 496 (654)
+||||+..| +|.+++.. ...+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++..
T Consensus 106 lv~e~~~~g~~l~~~~~~-----~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~ 179 (335)
T 3dls_A 106 LVMEKHGSGLDLFAFIDR-----HPRLDEPLASYIFRQLVSAVGYLRLKD-IIHRDIKDENIVIAEDFTIKLIDFGSAAY 179 (335)
T ss_dssp EEEECCTTSCBHHHHHHT-----CCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEeCCCCccHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEEeccCHHHEEEcCCCcEEEeecccceE
Confidence 999999777 99999973 345999999999999999999999998 99999999999999999999999999987
Q ss_pred cCCCC---CCCccccccCccccCCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhh
Q 036334 497 FGNTT---PPTRVAGYRAPEVVETRKV-TFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFD 572 (654)
Q Consensus 497 ~~~~~---~~~~~~~y~aPE~~~~~~~-~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 572 (654)
..... ...++..|+|||++.+..+ +.++|||||||++|||++|+.||....... . ....
T Consensus 180 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~------------~-----~~~~ 242 (335)
T 3dls_A 180 LERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETV------------E-----AAIH 242 (335)
T ss_dssp CCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGT------------T-----TCCC
T ss_pred CCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHHH------------h-----hccC
Confidence 65433 2346788999999988776 789999999999999999999996422110 0 0000
Q ss_pred HhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 036334 573 VELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRM 612 (654)
Q Consensus 573 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 612 (654)
.... ...++.+++.+||+.||++|||++|+++.
T Consensus 243 ----~~~~---~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 243 ----PPYL---VSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp ----CSSC---CCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred ----CCcc---cCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0111 12356778889999999999999999885
No 122
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=4.2e-39 Score=330.45 Aligned_cols=255 Identities=16% Similarity=0.204 Sum_probs=199.5
Q ss_pred HhhccccccCceeEEEEEe-cCCcEEEEEEecccccCHHHHHHHHHHHhccCCCccccccEEE-EeCCceEEEEEecCCC
Q 036334 349 ASAEVLGKGSVGTSYKAVL-EEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFY-YSKDEKLLVYDYMPAG 426 (654)
Q Consensus 349 ~~~~~lg~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~-~~~~~~~lv~e~~~~g 426 (654)
.+.+.||+|+||.||+|.. .+++.||||++..... ..++.+|++++++++|++++..+.++ ...+..++||||+ ++
T Consensus 12 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~ 89 (296)
T 4hgt_A 12 RLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GP 89 (296)
T ss_dssp EEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CC
T ss_pred EEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc-chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc-CC
Confidence 3457899999999999995 5688999998655432 34578899999999998888877766 5566789999999 99
Q ss_pred chhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEE---CCCCCeEEeccCCCCCcCCC---
Q 036334 427 SLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILL---RPDHDACVSDFGLNPLFGNT--- 500 (654)
Q Consensus 427 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll---~~~~~~kl~Dfgla~~~~~~--- 500 (654)
+|.+++... ...+++..++.++.|++.||+|||+++ |+||||||+|||+ +.++.+||+|||++......
T Consensus 90 ~L~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~ 164 (296)
T 4hgt_A 90 SLEDLFNFC----SRKFSLKTVLLLADQMISRIEYIHSKN-FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH 164 (296)
T ss_dssp BHHHHHHHT----TSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred CHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccC
Confidence 999999743 235999999999999999999999998 9999999999999 78899999999998765432
Q ss_pred --------CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhh
Q 036334 501 --------TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFD 572 (654)
Q Consensus 501 --------~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 572 (654)
....++..|+|||++.+..++.++|||||||++|||++|+.||..............+......... .
T Consensus 165 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-~--- 240 (296)
T 4hgt_A 165 QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI-E--- 240 (296)
T ss_dssp CBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH-H---
T ss_pred ccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchh-h---
Confidence 2345677899999999999999999999999999999999999875544333222211111000000 0
Q ss_pred HhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCC
Q 036334 573 VELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGE 620 (654)
Q Consensus 573 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 620 (654)
.. . .....++.+++.+||+.||++|||++++++.|+++....
T Consensus 241 -~~--~---~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~ 282 (296)
T 4hgt_A 241 -VL--C---KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 282 (296)
T ss_dssp -HH--T---TTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHH
T ss_pred -hh--h---ccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHh
Confidence 00 0 011236778888999999999999999999999997554
No 123
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=1.9e-39 Score=353.72 Aligned_cols=238 Identities=21% Similarity=0.345 Sum_probs=196.7
Q ss_pred hhccccccCceeEEEEEec-CCcEEEEEEecccc----cCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecC
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVA----VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMP 424 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~ 424 (654)
+.+.||+|+||.||+|... +|+.||||++.... .....+.+|+.+++.++||||+++++++.+.+..++||||++
T Consensus 20 l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~~~ 99 (476)
T 2y94_A 20 LGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVS 99 (476)
T ss_dssp EEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCS
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCC
Confidence 3578999999999999965 68999999997542 234678899999999999999999999999999999999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC---C
Q 036334 425 AGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT---T 501 (654)
Q Consensus 425 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~---~ 501 (654)
+|+|.+++.. ...+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++...... .
T Consensus 100 gg~L~~~l~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~~~ 173 (476)
T 2y94_A 100 GGELFDYICK-----NGRLDEKESRRLFQQILSGVDYCHRHM-VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLR 173 (476)
T ss_dssp SEEHHHHTTS-----SSSCCHHHHHHHHHHHHHHHHHHHTTT-EECSCCSGGGEEECTTCCEEECCCSSCEECCTTCCBC
T ss_pred CCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-CCcccccHHHEEEecCCCeEEEeccchhhcccccccc
Confidence 9999999973 345999999999999999999999998 999999999999999999999999999876543 2
Q ss_pred CCCccccccCccccCCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccCC
Q 036334 502 PPTRVAGYRAPEVVETRKV-TFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHN 580 (654)
Q Consensus 502 ~~~~~~~y~aPE~~~~~~~-~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 580 (654)
...+++.|+|||++.+..+ +.++||||+||++|||++|+.||.... .......+...... ...
T Consensus 174 ~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~------~~~~~~~i~~~~~~---------~p~- 237 (476)
T 2y94_A 174 TSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDH------VPTLFKKICDGIFY---------TPQ- 237 (476)
T ss_dssp CCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSS------SHHHHHHHHTTCCC---------CCT-
T ss_pred ccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCC------HHHHHHHHhcCCcC---------CCc-
Confidence 3567888999999988766 689999999999999999999997532 12222222221110 011
Q ss_pred hHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 036334 581 IEEEMVQLLQIAMGCVSTVPDQRPAMQEVVR 611 (654)
Q Consensus 581 ~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 611 (654)
....++.+++.+||+.||++|||++|+++
T Consensus 238 --~~s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 238 --YLNPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp --TCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred --cCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 11235677888999999999999999986
No 124
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=4.8e-40 Score=352.12 Aligned_cols=241 Identities=20% Similarity=0.279 Sum_probs=194.4
Q ss_pred hccccccCceeEEEEEec-CCcEEEEEEecccc----cCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCC
Q 036334 351 AEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVA----VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPA 425 (654)
Q Consensus 351 ~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~ 425 (654)
.++||+|+||+||+|... +++.||+|++++.. .....+.+|+.+++.++||||++++++|.+++..|+||||+++
T Consensus 74 ~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~g 153 (410)
T 3v8s_A 74 VKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPG 153 (410)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCC
Confidence 478999999999999965 48899999997532 2334578899999999999999999999999999999999999
Q ss_pred CchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC-----
Q 036334 426 GSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT----- 500 (654)
Q Consensus 426 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~----- 500 (654)
|+|.+++.. ..+++..++.++.||+.||+|||+++ |+||||||+|||++.++++||+|||++......
T Consensus 154 g~L~~~l~~------~~~~e~~~~~~~~qi~~aL~~LH~~g-ivHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~ 226 (410)
T 3v8s_A 154 GDLVNLMSN------YDVPEKWARFYTAEVVLALDAIHSMG-FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRC 226 (410)
T ss_dssp EEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCTTSEEEC
T ss_pred CcHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCCHHHeeECCCCCEEEeccceeEeeccCCcccc
Confidence 999999973 24899999999999999999999998 999999999999999999999999999766543
Q ss_pred CCCCccccccCccccCCCC----CCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhh
Q 036334 501 TPPTRVAGYRAPEVVETRK----VTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELM 576 (654)
Q Consensus 501 ~~~~~~~~y~aPE~~~~~~----~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 576 (654)
....+|+.|+|||++.+.. ++.++|||||||++|||++|+.||.... .......+....... ...
T Consensus 227 ~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~------~~~~~~~i~~~~~~~-----~~p 295 (410)
T 3v8s_A 227 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS------LVGTYSKIMNHKNSL-----TFP 295 (410)
T ss_dssp CSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHTHHHHC-----CCC
T ss_pred cCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCC------hhhHHHHHHhccccc-----cCC
Confidence 2456888999999997655 7899999999999999999999997532 222222222211000 000
Q ss_pred ccCChHHHHHHHHHHHhhccCCCCCC--CCCHHHHHHH
Q 036334 577 RYHNIEEEMVQLLQIAMGCVSTVPDQ--RPAMQEVVRM 612 (654)
Q Consensus 577 ~~~~~~~~~~~l~~l~~~cl~~dP~~--RPs~~evl~~ 612 (654)
..... ..++.+++.+||..+|.+ ||+++||++.
T Consensus 296 ~~~~~---s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 296 DDNDI---SKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp TTCCC---CHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred Ccccc---cHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 11112 234566777999999988 9999999874
No 125
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=1.1e-39 Score=337.62 Aligned_cols=255 Identities=20% Similarity=0.373 Sum_probs=194.4
Q ss_pred hhccccccCceeEEEEEe-cCCcEEEEEEecccc----cCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecC
Q 036334 350 SAEVLGKGSVGTSYKAVL-EEGTTVVVKRLKEVA----VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMP 424 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~-~~g~~vavK~~~~~~----~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~ 424 (654)
+.+.||+|+||.||+|.. .+|+.||||+++... ....++.+|+.++++++||||+++++++...+..++||||++
T Consensus 36 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 115 (310)
T 2wqm_A 36 IEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELAD 115 (310)
T ss_dssp EEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCC
T ss_pred EEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEecCC
Confidence 457899999999999995 468999999997532 234568899999999999999999999999999999999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC----
Q 036334 425 AGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT---- 500 (654)
Q Consensus 425 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~---- 500 (654)
+|+|.+++..... ....+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++......
T Consensus 116 ~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 193 (310)
T 2wqm_A 116 AGDLSRMIKHFKK-QKRLIPERTVWKYFVQLCSALEHMHSRR-VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAA 193 (310)
T ss_dssp SCBHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCC-------------
T ss_pred CCCHHHHHHHhcc-cccCCCHHHHHHHHHHHHHHHHHHhhCC-eeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCccc
Confidence 9999999864221 2345899999999999999999999998 999999999999999999999999998766433
Q ss_pred CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccCC
Q 036334 501 TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHN 580 (654)
Q Consensus 501 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 580 (654)
....++..|+|||++.+..++.++||||||+++|||++|+.||.... .........+....... ..
T Consensus 194 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~----~~~~~~~~~~~~~~~~~----------~~ 259 (310)
T 2wqm_A 194 HSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK----MNLYSLCKKIEQCDYPP----------LP 259 (310)
T ss_dssp -----CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCHHHHHHHHHTTCSCC----------CC
T ss_pred cccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccc----hhHHHHHHHhhcccCCC----------Cc
Confidence 22356778999999999999999999999999999999999996432 12222222221111100 00
Q ss_pred hHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCC
Q 036334 581 IEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGE 620 (654)
Q Consensus 581 ~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 620 (654)
......++.+++.+||+.||++|||+.++++.|+++....
T Consensus 260 ~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~ 299 (310)
T 2wqm_A 260 SDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACT 299 (310)
T ss_dssp TTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhh
Confidence 0112235777888999999999999999999999998654
No 126
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=3.2e-40 Score=335.99 Aligned_cols=249 Identities=26% Similarity=0.398 Sum_probs=194.5
Q ss_pred HhhccccccCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHhccCCCccccccEEEEeC-CceEEEEEecCCCc
Q 036334 349 ASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSK-DEKLLVYDYMPAGS 427 (654)
Q Consensus 349 ~~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~-~~~~lv~e~~~~g~ 427 (654)
.+.+.||+|+||.||++... |+.||||+++... ..+.+.+|++++++++||||+++++++.+. +..++||||+++|+
T Consensus 24 ~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~ 101 (278)
T 1byg_A 24 KLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGS 101 (278)
T ss_dssp EEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC---HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEE
T ss_pred eEEeEEecCCCceEEEEEEc-CCEEEEEEecchh-HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCCCCC
Confidence 34578999999999999875 8999999987543 456789999999999999999999997654 47899999999999
Q ss_pred hhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC-CCCCcc
Q 036334 428 LSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT-TPPTRV 506 (654)
Q Consensus 428 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~-~~~~~~ 506 (654)
|.+++.... ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++...... ....++
T Consensus 102 L~~~l~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~ 177 (278)
T 1byg_A 102 LVDYLRSRG---RSVLGGDCLLKFSLDVCEAMEYLEGNN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP 177 (278)
T ss_dssp HHHHHHHHH---HHHCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTSCEEECCCCC------------CC
T ss_pred HHHHHHhcc---cccCCHHHHHHHHHHHHHHHHHHHhCC-ccccCCCcceEEEeCCCcEEEeeccccccccccccCCCcc
Confidence 999997431 223789999999999999999999998 999999999999999999999999998765433 233456
Q ss_pred ccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccCChHHHH
Q 036334 507 AGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEM 585 (654)
Q Consensus 507 ~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 585 (654)
..|+|||++.+..++.++||||||+++|||++ |+.||...... .....+. .... ........
T Consensus 178 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~------~~~~~~~-~~~~----------~~~~~~~~ 240 (278)
T 1byg_A 178 VKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK------DVVPRVE-KGYK----------MDAPDGCP 240 (278)
T ss_dssp TTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG------GHHHHHT-TTCC----------CCCCTTCC
T ss_pred ccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH------HHHHHHh-cCCC----------CCCcccCC
Confidence 77999999988899999999999999999998 99998753221 1111111 1110 01111223
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCC
Q 036334 586 VQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGE 620 (654)
Q Consensus 586 ~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 620 (654)
..+.+++.+||+.||++|||+.|+++.|++++..+
T Consensus 241 ~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~~ 275 (278)
T 1byg_A 241 PAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 275 (278)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhhh
Confidence 46777888999999999999999999999997654
No 127
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=5.1e-40 Score=348.22 Aligned_cols=245 Identities=15% Similarity=0.227 Sum_probs=196.9
Q ss_pred hhccccccCceeEEEEE------ecCCcEEEEEEecccccCHHHHHHHHHHHhccC---CCccccccEEEEeCCceEEEE
Q 036334 350 SAEVLGKGSVGTSYKAV------LEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIK---HDNVVPLRAFYYSKDEKLLVY 420 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~------~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~---hpniv~l~~~~~~~~~~~lv~ 420 (654)
+.+.||+|+||+||+|. ...++.||||+++.. ...++.+|++++++++ |+||+++++++...+..++||
T Consensus 69 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~lv~ 146 (365)
T 3e7e_A 69 VHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA--NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVG 146 (365)
T ss_dssp EEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC--CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEEEE
T ss_pred EEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC--ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEEEE
Confidence 34789999999999994 446889999998754 3567788888888886 999999999999999999999
Q ss_pred EecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECC-----------CCCeEEe
Q 036334 421 DYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRP-----------DHDACVS 489 (654)
Q Consensus 421 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~-----------~~~~kl~ 489 (654)
||+++|+|.+++...+......+++..++.++.|++.||+|||+++ |+||||||+|||++. ++.+||+
T Consensus 147 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~-ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~ 225 (365)
T 3e7e_A 147 ELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE-IIHGDIKPDNFILGNGFLEQDDEDDLSAGLALI 225 (365)
T ss_dssp CCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCSGGGEEECGGGTCC------CTTEEEC
T ss_pred eccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC-eecCCCCHHHEEecccccCccccccccCCEEEe
Confidence 9999999999997543323456999999999999999999999998 999999999999998 8999999
Q ss_pred ccCCCCCcC---C---CCCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhh
Q 036334 490 DFGLNPLFG---N---TTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVR 563 (654)
Q Consensus 490 Dfgla~~~~---~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 563 (654)
|||++.... . .....+|.+|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 226 DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~------------ 293 (365)
T 3e7e_A 226 DLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC------------ 293 (365)
T ss_dssp CCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE------------
T ss_pred eCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCce------------
Confidence 999996542 1 1345678899999999999999999999999999999999999865322110
Q ss_pred hchhhhhhhHhhhccCChHHHHHHHHHHHhhccCCCCCCC-CCHHHHHHHHHhhhcC
Q 036334 564 EEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQR-PAMQEVVRMIENMNRG 619 (654)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R-Ps~~evl~~L~~~~~~ 619 (654)
..... +... ...+ .+.+++..|++.+|.+| |+++++.+.|+++...
T Consensus 294 --~~~~~----~~~~-~~~~---~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~ 340 (365)
T 3e7e_A 294 --KPEGL----FRRL-PHLD---MWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ 340 (365)
T ss_dssp --EECSC----CTTC-SSHH---HHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred --eechh----cccc-CcHH---HHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHH
Confidence 00000 0011 1122 34556679999999988 5889999999988654
No 128
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=6.3e-40 Score=340.75 Aligned_cols=261 Identities=23% Similarity=0.355 Sum_probs=199.9
Q ss_pred hhccccccCceeEEEEEec-----CCcEEEEEEecccc--cCHHHHHHHHHHHhccCCCccccccEEEEeC--CceEEEE
Q 036334 350 SAEVLGKGSVGTSYKAVLE-----EGTTVVVKRLKEVA--VGKREFEMQMEVLGKIKHDNVVPLRAFYYSK--DEKLLVY 420 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-----~g~~vavK~~~~~~--~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~--~~~~lv~ 420 (654)
+.+.||+|+||+||++.+. +|+.||||+++... ...+.+.+|++++++++||||+++++++.+. ...++||
T Consensus 35 ~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 114 (318)
T 3lxp_A 35 KIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVM 114 (318)
T ss_dssp EEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEEE
T ss_pred hhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEEE
Confidence 3578999999999988642 58899999997653 2345688999999999999999999999874 5679999
Q ss_pred EecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC
Q 036334 421 DYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT 500 (654)
Q Consensus 421 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~ 500 (654)
||+++|+|.+++... .+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 115 e~~~~~~L~~~l~~~------~~~~~~~~~i~~~l~~~l~~LH~~~-ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 187 (318)
T 3lxp_A 115 EYVPLGSLRDYLPRH------SIGLAQLLLFAQQICEGMAYLHAQH-YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG 187 (318)
T ss_dssp CCCTTCBHHHHGGGS------CCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCGGGCEECCTT
T ss_pred ecccCCcHHHHHhhC------CCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCchheEEEcCCCCEEECCcccccccccc
Confidence 999999999999732 3899999999999999999999998 999999999999999999999999999876543
Q ss_pred -------CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhH
Q 036334 501 -------TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDV 573 (654)
Q Consensus 501 -------~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 573 (654)
....++..|+|||++.+..++.++||||||+++|||++|+.||........ ....+................
T Consensus 188 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 266 (318)
T 3lxp_A 188 HEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFL-ELIGIAQGQMTVLRLTELLER 266 (318)
T ss_dssp CSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHH-HHHCSCCHHHHHHHHHHHHHT
T ss_pred ccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhh-hhhcccccchhHHHHHHHHhc
Confidence 223455669999999988899999999999999999999999864211000 000000000000000000000
Q ss_pred hhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcC
Q 036334 574 ELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRG 619 (654)
Q Consensus 574 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 619 (654)
.. ..........++.+++.+||+.||++|||++|+++.|+++.+.
T Consensus 267 ~~-~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~ 311 (318)
T 3lxp_A 267 GE-RLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEK 311 (318)
T ss_dssp TC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cc-CCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHh
Confidence 00 1111223345678888899999999999999999999998754
No 129
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=9.8e-40 Score=340.60 Aligned_cols=238 Identities=21% Similarity=0.275 Sum_probs=187.1
Q ss_pred hhccccccCceeEEEEEe----cCCcEEEEEEecccc-----cCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEE
Q 036334 350 SAEVLGKGSVGTSYKAVL----EEGTTVVVKRLKEVA-----VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVY 420 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~----~~g~~vavK~~~~~~-----~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 420 (654)
+.+.||+|+||.||++.. .+|+.||+|+++... .....+.+|++++++++||||+++++++.+.+..++||
T Consensus 21 ~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 100 (327)
T 3a62_A 21 LLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLIL 100 (327)
T ss_dssp EEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred EEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEEEEEE
Confidence 457899999999999986 468999999997642 22345778999999999999999999999999999999
Q ss_pred EecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC
Q 036334 421 DYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT 500 (654)
Q Consensus 421 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~ 500 (654)
||+++|+|.+++... ..+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 101 e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 174 (327)
T 3a62_A 101 EYLSGGELFMQLERE-----GIFMEDTACFYLAEISMALGHLHQKG-IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHD 174 (327)
T ss_dssp ECCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCTTTEEECTTSCEEECCCSCC------
T ss_pred eCCCCCcHHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHHhCC-EEcccCCHHHeEECCCCcEEEEeCCcccccccC
Confidence 999999999999742 35899999999999999999999998 999999999999999999999999998754322
Q ss_pred ----CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhh
Q 036334 501 ----TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELM 576 (654)
Q Consensus 501 ----~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 576 (654)
....++..|+|||++.+..++.++|||||||++|||++|+.||.... ....+..+.....
T Consensus 175 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~------~~~~~~~i~~~~~---------- 238 (327)
T 3a62_A 175 GTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGEN------RKKTIDKILKCKL---------- 238 (327)
T ss_dssp ----CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHTCC----------
T ss_pred CccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCC------HHHHHHHHHhCCC----------
Confidence 23457888999999999999999999999999999999999997532 1222222222111
Q ss_pred ccCChHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 036334 577 RYHNIEEEMVQLLQIAMGCVSTVPDQRP-----AMQEVVR 611 (654)
Q Consensus 577 ~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~ 611 (654)
........++.+++.+||+.||++|| +++|+++
T Consensus 239 --~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 239 --NLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp --CCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred --CCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 00111223567788899999999999 7777765
No 130
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=1.2e-39 Score=368.34 Aligned_cols=243 Identities=26% Similarity=0.344 Sum_probs=196.3
Q ss_pred ccccccCceeEEEEEec---CCcEEEEEEeccccc---CHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCC
Q 036334 352 EVLGKGSVGTSYKAVLE---EGTTVVVKRLKEVAV---GKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPA 425 (654)
Q Consensus 352 ~~lg~G~fg~Vy~~~~~---~g~~vavK~~~~~~~---~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~ 425 (654)
+.||+|+||.||+|.+. .++.||||+++.... ..+++.+|++++++++|||||+++++|. .+..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCEEEEEEccCC
Confidence 47999999999999753 467899999986533 2478999999999999999999999986 4568999999999
Q ss_pred CchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC-----
Q 036334 426 GSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT----- 500 (654)
Q Consensus 426 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~----- 500 (654)
|+|.+++.. ...+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 454 g~L~~~l~~-----~~~l~~~~~~~i~~qi~~~L~yLH~~~-iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 527 (635)
T 4fl3_A 454 GPLNKYLQQ-----NRHVKDKNIIELVHQVSMGMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 527 (635)
T ss_dssp EEHHHHHHH-----CTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC------
T ss_pred CCHHHHHhh-----CCCCCHHHHHHHHHHHHHHHHHHHHCC-EeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccc
Confidence 999999973 345899999999999999999999998 999999999999999999999999998765432
Q ss_pred --CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhc
Q 036334 501 --TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMR 577 (654)
Q Consensus 501 --~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 577 (654)
....++..|+|||++.+..++.++|||||||++|||++ |+.||...... . +...+.....
T Consensus 528 ~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~------~-~~~~i~~~~~---------- 590 (635)
T 4fl3_A 528 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS------E-VTAMLEKGER---------- 590 (635)
T ss_dssp -------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH------H-HHHHHHTTCC----------
T ss_pred cccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH------H-HHHHHHcCCC----------
Confidence 12234567999999999999999999999999999998 99999754321 1 1111111111
Q ss_pred cCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhc
Q 036334 578 YHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNR 618 (654)
Q Consensus 578 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 618 (654)
.........++.+++.+||+.||++||++++|++.|+++..
T Consensus 591 ~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 631 (635)
T 4fl3_A 591 MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 631 (635)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 11112233567788889999999999999999999998753
No 131
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1.2e-39 Score=333.71 Aligned_cols=249 Identities=27% Similarity=0.434 Sum_probs=189.5
Q ss_pred hhccccccCceeEEEEEecCCcEEEEEEecccccC---HHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCCC
Q 036334 350 SAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVG---KREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAG 426 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~---~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g 426 (654)
+.+.||+|+||.||+|... ..||||+++..... .+.+.+|++++++++||||+++++++ ..+..++||||++++
T Consensus 28 ~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~~~~~ 104 (289)
T 3og7_A 28 VGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGS 104 (289)
T ss_dssp EEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEECCCEE
T ss_pred eeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEEecCCC
Confidence 3578999999999999865 36999999765433 35688999999999999999999965 556789999999999
Q ss_pred chhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC------
Q 036334 427 SLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT------ 500 (654)
Q Consensus 427 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~------ 500 (654)
+|.+++... ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++......
T Consensus 105 ~L~~~l~~~----~~~~~~~~~~~i~~qi~~~L~~lH~~~-i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 179 (289)
T 3og7_A 105 SLYHHLHAS----ETKFEMKKLIDIARQTARGMDYLHAKS-IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQF 179 (289)
T ss_dssp EHHHHHTTC-------CCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEETTTEEEECCCC--------------
T ss_pred cHHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHHhCC-cccccCccceEEECCCCCEEEccceeccccccccccccc
Confidence 999999643 345899999999999999999999998 999999999999999999999999998765421
Q ss_pred CCCCccccccCccccC---CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhc
Q 036334 501 TPPTRVAGYRAPEVVE---TRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMR 577 (654)
Q Consensus 501 ~~~~~~~~y~aPE~~~---~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 577 (654)
....++..|+|||++. +..++.++||||||+++|||++|+.||...... ..+..............
T Consensus 180 ~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~------~~~~~~~~~~~~~~~~~----- 248 (289)
T 3og7_A 180 EQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR------DQIIEMVGRGSLSPDLS----- 248 (289)
T ss_dssp ----CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCH------HHHHHHHHHTSCCCCTT-----
T ss_pred cccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchH------HHHHHHhcccccCcchh-----
Confidence 2235678899999986 567889999999999999999999999753221 11222221111110000
Q ss_pred cCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhc
Q 036334 578 YHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNR 618 (654)
Q Consensus 578 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 618 (654)
.........+.+++.+||+.||++|||++|+++.|+++.+
T Consensus 249 -~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 249 -KVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp -SSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred -hccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 0011223467788889999999999999999999999865
No 132
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=6.9e-39 Score=331.80 Aligned_cols=239 Identities=23% Similarity=0.273 Sum_probs=186.5
Q ss_pred HHHhhccccccCceeEEEEEec-CCcEEEEEEecccccCH---HHHHHHHHHHhcc-CCCccccccEEEEeCCceEEEEE
Q 036334 347 LRASAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAVGK---REFEMQMEVLGKI-KHDNVVPLRAFYYSKDEKLLVYD 421 (654)
Q Consensus 347 ~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~---~~~~~e~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e 421 (654)
.+...++||+|+||+||+|... +|+.||||++....... .++..|+..+.++ +||||++++++|.+++..++|||
T Consensus 58 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e 137 (311)
T 3p1a_A 58 SFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTE 137 (311)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred heeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEe
Confidence 3445678999999999999976 68999999987653332 2344455555444 89999999999999999999999
Q ss_pred ecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC-
Q 036334 422 YMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT- 500 (654)
Q Consensus 422 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~- 500 (654)
|+ +++|.+++... ...+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 138 ~~-~~~L~~~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~ 211 (311)
T 3p1a_A 138 LC-GPSLQQHCEAW----GASLPEAQVWGYLRDTLLALAHLHSQG-LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG 211 (311)
T ss_dssp CC-CCBHHHHHHHH----CSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECGGGCEEECCCTTCEECC---
T ss_pred cc-CCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHEEECCCCCEEEccceeeeecccCC
Confidence 99 67999888743 245999999999999999999999998 999999999999999999999999998766533
Q ss_pred --CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhcc
Q 036334 501 --TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRY 578 (654)
Q Consensus 501 --~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 578 (654)
....++.+|+|||++.+ .++.++|||||||++|||++|..|+..... ... +..... .....
T Consensus 212 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~---------~~~-~~~~~~----~~~~~-- 274 (311)
T 3p1a_A 212 AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG---------WQQ-LRQGYL----PPEFT-- 274 (311)
T ss_dssp ---CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH---------HHH-HTTTCC----CHHHH--
T ss_pred CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH---------HHH-HhccCC----Ccccc--
Confidence 23457888999999876 799999999999999999999777643110 111 111111 11110
Q ss_pred CChHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 036334 579 HNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVR 611 (654)
Q Consensus 579 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 611 (654)
.....++.+++.+||+.||++|||++|+++
T Consensus 275 ---~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 275 ---AGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp ---TTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ---cCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 112245778888999999999999999986
No 133
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.1e-39 Score=332.77 Aligned_cols=243 Identities=22% Similarity=0.374 Sum_probs=197.3
Q ss_pred HhhccccccCceeEEEEEec-CCcEEEEEEecccccCHHHHHHHHHHHhccCCCccccccEEEEe---------------
Q 036334 349 ASAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYS--------------- 412 (654)
Q Consensus 349 ~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~--------------- 412 (654)
...+.||+|+||.||+|... +|+.||+|+++... ..+.+|++++++++||||+++++++..
T Consensus 14 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~ 90 (284)
T 2a19_B 14 KEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN---EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRS 90 (284)
T ss_dssp EEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS---GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------CC
T ss_pred ceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc---HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccccccccc
Confidence 44678999999999999976 68999999987543 457789999999999999999998864
Q ss_pred -CCceEEEEEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEecc
Q 036334 413 -KDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDF 491 (654)
Q Consensus 413 -~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Df 491 (654)
....++||||+++|+|.+++.... ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+||
T Consensus 91 ~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Df 166 (284)
T 2a19_B 91 KTKCLFIQMEFCDKGTLEQWIEKRR---GEKLDKVLALELFEQITKGVDYIHSKK-LINRDLKPSNIFLVDTKQVKIGDF 166 (284)
T ss_dssp EEEEEEEEECCCCSCBHHHHHHHGG---GSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCC
T ss_pred CcceEEEEEeccCCCCHHHHHhhcc---CCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCCHHHEEEcCCCCEEECcc
Confidence 345799999999999999997432 245899999999999999999999998 999999999999999999999999
Q ss_pred CCCCCcCCC---CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhh
Q 036334 492 GLNPLFGNT---TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTA 568 (654)
Q Consensus 492 gla~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (654)
|++...... ....++..|+|||++.+..++.++||||||+++|||++|..|+... ...... .......
T Consensus 167 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~--------~~~~~~-~~~~~~~ 237 (284)
T 2a19_B 167 GLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET--------SKFFTD-LRDGIIS 237 (284)
T ss_dssp TTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH--------HHHHHH-HHTTCCC
T ss_pred hhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH--------HHHHHH-hhccccc
Confidence 998766433 3345778899999999999999999999999999999998886421 111111 1111000
Q ss_pred hhhhHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCC
Q 036334 569 EVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGE 620 (654)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 620 (654)
......+.+++.+||+.||++|||+.|+++.|+.++...
T Consensus 238 -------------~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~ 276 (284)
T 2a19_B 238 -------------DIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSP 276 (284)
T ss_dssp -------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC--
T ss_pred -------------ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCC
Confidence 111234667888999999999999999999999998654
No 134
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.3e-39 Score=333.88 Aligned_cols=250 Identities=20% Similarity=0.292 Sum_probs=193.1
Q ss_pred hhccccccCceeEEEEEec-CCcEEEEEEecccccC----HHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecC
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAVG----KREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMP 424 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~----~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~ 424 (654)
+.+.||+|+||.||+|... +++.||+|++...... .+.+.+|+.++++++||||+++++++..++..++||||++
T Consensus 38 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~ 117 (309)
T 2h34_A 38 LRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDMRLIN 117 (309)
T ss_dssp EEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCC
T ss_pred EEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEEecC
Confidence 3578999999999999965 6889999999765322 3668899999999999999999999999999999999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC----
Q 036334 425 AGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT---- 500 (654)
Q Consensus 425 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~---- 500 (654)
+++|.+++... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 118 ~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 191 (309)
T 2h34_A 118 GVDLAAMLRRQ-----GPLAPPRAVAIVRQIGSALDAAHAAG-ATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQ 191 (309)
T ss_dssp CEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECSCCC-----------
T ss_pred CCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCc-CCcCCCChHHEEEcCCCCEEEecCccCcccccccccc
Confidence 99999999742 45899999999999999999999998 999999999999999999999999998766433
Q ss_pred -CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccC
Q 036334 501 -TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYH 579 (654)
Q Consensus 501 -~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 579 (654)
....++..|+|||++.+..++.++||||||+++|||++|+.||..... ..+......... .... .
T Consensus 192 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-------~~~~~~~~~~~~----~~~~-~-- 257 (309)
T 2h34_A 192 LGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQL-------SVMGAHINQAIP----RPST-V-- 257 (309)
T ss_dssp -----CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHH-------HHHHHHHHSCCC----CGGG-T--
T ss_pred ccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchH-------HHHHHHhccCCC----Cccc-c--
Confidence 234567789999999999999999999999999999999999975321 111111111110 0000 0
Q ss_pred ChHHHHHHHHHHHhhccCCCCCCCC-CHHHHHHHHHhhhcCC
Q 036334 580 NIEEEMVQLLQIAMGCVSTVPDQRP-AMQEVVRMIENMNRGE 620 (654)
Q Consensus 580 ~~~~~~~~l~~l~~~cl~~dP~~RP-s~~evl~~L~~~~~~~ 620 (654)
......++.+++.+||+.||++|| +++++++.|+++....
T Consensus 258 -~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~ 298 (309)
T 2h34_A 258 -RPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATA 298 (309)
T ss_dssp -STTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred -CCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence 111223567788899999999999 9999999999887554
No 135
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=3.2e-39 Score=335.81 Aligned_cols=244 Identities=22% Similarity=0.342 Sum_probs=198.4
Q ss_pred HHhhccccccCceeEEEEEec-CCcEEEEEEeccccc-------CHHHHHHHHHHHhccCCCccccccEEEEeCCceEEE
Q 036334 348 RASAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAV-------GKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLV 419 (654)
Q Consensus 348 ~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~-------~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv 419 (654)
|.+.+.||+|+||.||+|... +|+.||+|+++.... ..+++.+|+.++++++||||+++++++.+.+..++|
T Consensus 14 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (321)
T 2a2a_A 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLI 93 (321)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred EEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEE
Confidence 345688999999999999965 589999999975432 356799999999999999999999999999999999
Q ss_pred EEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCC----CeEEeccCCCC
Q 036334 420 YDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDH----DACVSDFGLNP 495 (654)
Q Consensus 420 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~----~~kl~Dfgla~ 495 (654)
|||+++++|.+++.. ...+++..++.++.|++.||+|||+.+ |+||||||+||+++.++ .+||+|||++.
T Consensus 94 ~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~lH~~~-ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~ 167 (321)
T 2a2a_A 94 LELVSGGELFDFLAQ-----KESLSEEEATSFIKQILDGVNYLHTKK-IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167 (321)
T ss_dssp ECCCCSCBHHHHHHT-----CSCEEHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESCTTSSSCCEEECCCTTCE
T ss_pred EEcCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCChHHEEEecCCCCcCCEEEccCccce
Confidence 999999999999973 345899999999999999999999998 99999999999999888 79999999997
Q ss_pred CcCCC---CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhh
Q 036334 496 LFGNT---TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFD 572 (654)
Q Consensus 496 ~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 572 (654)
..... ....++..|+|||++.+..++.++|||||||++|||++|+.||..... ......+..... .++
T Consensus 168 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~~i~~~~~---~~~ 238 (321)
T 2a2a_A 168 EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK------QETLANITSVSY---DFD 238 (321)
T ss_dssp ECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH------HHHHHHHHTTCC---CCC
T ss_pred ecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCH------HHHHHHHHhccc---ccC
Confidence 66543 234577889999999999999999999999999999999999965321 122222211110 001
Q ss_pred HhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 036334 573 VELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVR 611 (654)
Q Consensus 573 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 611 (654)
... .. .....+.+++.+||+.||++|||++|+++
T Consensus 239 ~~~--~~---~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 239 EEF--FS---HTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp HHH--HT---TCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred hhh--hc---ccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 110 00 11235677888999999999999999986
No 136
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=9.7e-40 Score=338.03 Aligned_cols=254 Identities=20% Similarity=0.291 Sum_probs=191.8
Q ss_pred hhccccccCceeEEEEEec-CCcEEEEEEecccccC---HHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCC
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAVG---KREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPA 425 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~ 425 (654)
..+.||+|+||+||+|... +|+.||||++...... .+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 7 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 86 (311)
T 4agu_A 7 KIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDH 86 (311)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred EeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEeCCC
Confidence 3578999999999999975 4899999998665433 35678899999999999999999999999999999999999
Q ss_pred CchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC----C
Q 036334 426 GSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT----T 501 (654)
Q Consensus 426 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~----~ 501 (654)
++|.+++.. ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++...... .
T Consensus 87 ~~l~~~~~~-----~~~~~~~~~~~i~~~l~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 160 (311)
T 4agu_A 87 TVLHELDRY-----QRGVPEHLVKSITWQTLQAVNFCHKHN-CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYD 160 (311)
T ss_dssp EHHHHHHHT-----SSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECC-------
T ss_pred chHHHHHhh-----hcCCCHHHHHHHHHHHHHHHHHHHHCC-CcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccccC
Confidence 999998873 345899999999999999999999998 999999999999999999999999999776532 2
Q ss_pred CCCccccccCccccCC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhh------------chhh
Q 036334 502 PPTRVAGYRAPEVVET-RKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVRE------------EWTA 568 (654)
Q Consensus 502 ~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~------------~~~~ 568 (654)
...++..|+|||++.+ ..++.++||||||+++|||++|+.||......+. ...+...... .+..
T Consensus 161 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (311)
T 4agu_A 161 DEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQ---LYLIRKTLGDLIPRHQQVFSTNQYFS 237 (311)
T ss_dssp -----GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHCSCCHHHHHHHHTCGGGT
T ss_pred CCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHhcccccccccccccccccc
Confidence 3456778999999875 6789999999999999999999999976432211 1111111100 0000
Q ss_pred hhhhHhhhccCC----hHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 036334 569 EVFDVELMRYHN----IEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRM 612 (654)
Q Consensus 569 ~~~~~~~~~~~~----~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 612 (654)
....+....... .......+.+++.+||+.||++|||++|+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 238 GVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp TCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred cCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 000000000000 01123357788889999999999999999864
No 137
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=4.1e-39 Score=334.09 Aligned_cols=247 Identities=23% Similarity=0.311 Sum_probs=189.8
Q ss_pred ccccccCceeEEEEEe-cCCcEEEEEEecccc-cCHHHHHHHHHHHhcc-CCCccccccEEEEeCCceEEEEEecCCCch
Q 036334 352 EVLGKGSVGTSYKAVL-EEGTTVVVKRLKEVA-VGKREFEMQMEVLGKI-KHDNVVPLRAFYYSKDEKLLVYDYMPAGSL 428 (654)
Q Consensus 352 ~~lg~G~fg~Vy~~~~-~~g~~vavK~~~~~~-~~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e~~~~g~L 428 (654)
++||+|+||+||+|.. .+++.||||++.... .....+.+|++++.++ +||||+++++++.+++..++||||+++|+|
T Consensus 19 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 98 (316)
T 2ac3_A 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSI 98 (316)
T ss_dssp CCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCBH
T ss_pred ceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCcH
Confidence 6799999999999995 468999999997653 3467789999999885 799999999999999999999999999999
Q ss_pred hhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCC---eEEeccCCCCCcCCC-----
Q 036334 429 SALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHD---ACVSDFGLNPLFGNT----- 500 (654)
Q Consensus 429 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~---~kl~Dfgla~~~~~~----- 500 (654)
.+++... ..+++..++.++.|++.||+|||+++ |+||||||+||+++.++. +||+|||++......
T Consensus 99 ~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~ 172 (316)
T 2ac3_A 99 LSHIHKR-----RHFNELEASVVVQDVASALDFLHNKG-IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSP 172 (316)
T ss_dssp HHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEESCSSSSCSEEECCTTCCC----------
T ss_pred HHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHhCC-ceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCcccc
Confidence 9999742 35899999999999999999999998 999999999999998776 999999998765321
Q ss_pred ------CCCCccccccCccccCC-----CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCCh-----h---HHHHHH
Q 036334 501 ------TPPTRVAGYRAPEVVET-----RKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDL-----P---RWVQSV 561 (654)
Q Consensus 501 ------~~~~~~~~y~aPE~~~~-----~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~-----~---~~~~~~ 561 (654)
....++..|+|||++.+ ..++.++|||||||++|||++|+.||......+.... . ..+...
T Consensus 173 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (316)
T 2ac3_A 173 ISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFES 252 (316)
T ss_dssp ---------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHH
T ss_pred ccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHH
Confidence 12347788999999865 5688999999999999999999999986543321100 0 000011
Q ss_pred hhhchhhhhhhHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 036334 562 VREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVR 611 (654)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 611 (654)
+.... ......... .....+.+++.+||+.||++|||++|+++
T Consensus 253 i~~~~----~~~~~~~~~---~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 253 IQEGK----YEFPDKDWA---HISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HHHCC----CCCCHHHHT---TSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HhccC----cccCchhcc---cCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 11100 000000000 11235778888999999999999999987
No 138
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=5.7e-39 Score=326.10 Aligned_cols=242 Identities=21% Similarity=0.283 Sum_probs=194.8
Q ss_pred HhhccccccCceeEEEEEec-CCcEEEEEEecccc--cCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCC
Q 036334 349 ASAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVA--VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPA 425 (654)
Q Consensus 349 ~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~ 425 (654)
.+.+.||+|+||.||+|... +++.||||++.... ...+.+.+|+.++++++||||+++++++.+.+..++||||+++
T Consensus 10 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 89 (276)
T 2yex_A 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSG 89 (276)
T ss_dssp EEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred EEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEecCC
Confidence 34678999999999999965 68999999987543 2346788999999999999999999999999999999999999
Q ss_pred CchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCC------
Q 036334 426 GSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN------ 499 (654)
Q Consensus 426 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~------ 499 (654)
++|.+++.. ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++.....
T Consensus 90 ~~L~~~l~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 163 (276)
T 2yex_A 90 GELFDRIEP-----DIGMPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 163 (276)
T ss_dssp EEGGGGSBT-----TTBCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECC
T ss_pred CcHHHHHhh-----ccCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhc
Confidence 999999973 345899999999999999999999998 99999999999999999999999999875432
Q ss_pred CCCCCccccccCccccCCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhcc
Q 036334 500 TTPPTRVAGYRAPEVVETRKV-TFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRY 578 (654)
Q Consensus 500 ~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 578 (654)
.....++..|+|||++.+..+ +.++||||||+++|||++|+.||....... ............ .
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-----~~~~~~~~~~~~---~------- 228 (276)
T 2yex_A 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-----QEYSDWKEKKTY---L------- 228 (276)
T ss_dssp BCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTS-----HHHHHHHTTCTT---S-------
T ss_pred ccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHH-----HHHHHhhhcccc---c-------
Confidence 123456778999999987665 788999999999999999999997643221 001111111000 0
Q ss_pred CChHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 036334 579 HNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVR 611 (654)
Q Consensus 579 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 611 (654)
.........+.+++.+||+.||++|||++|+++
T Consensus 229 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 229 NPWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CchhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 001112235667888999999999999999876
No 139
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=3.3e-39 Score=336.62 Aligned_cols=254 Identities=26% Similarity=0.385 Sum_probs=199.9
Q ss_pred hhccccccCceeEEEEEec-CCcE--EEEEEeccc--ccCHHHHHHHHHHHhcc-CCCccccccEEEEeCCceEEEEEec
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTT--VVVKRLKEV--AVGKREFEMQMEVLGKI-KHDNVVPLRAFYYSKDEKLLVYDYM 423 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~--vavK~~~~~--~~~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e~~ 423 (654)
+.+.||+|+||.||+|... +|.. ||+|+++.. ....+.+.+|+++++++ +||||+++++++.+.+..++||||+
T Consensus 29 ~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~ 108 (327)
T 1fvr_A 29 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA 108 (327)
T ss_dssp EEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred ceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEEecC
Confidence 4578999999999999854 4554 499988753 23446788999999999 8999999999999999999999999
Q ss_pred CCCchhhhhccCC-----------CCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccC
Q 036334 424 PAGSLSALLHGSR-----------GSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFG 492 (654)
Q Consensus 424 ~~g~L~~~l~~~~-----------~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfg 492 (654)
++|+|.+++.... ......+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||
T Consensus 109 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIl~~~~~~~kL~Dfg 187 (327)
T 1fvr_A 109 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-FIHRDLAARNILVGENYVAKIADFG 187 (327)
T ss_dssp TTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECGGGCEEECCTT
T ss_pred CCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCccceEEEcCCCeEEEcccC
Confidence 9999999997542 012346999999999999999999999998 9999999999999999999999999
Q ss_pred CCCCcCC---CCCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhchhh
Q 036334 493 LNPLFGN---TTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTA 568 (654)
Q Consensus 493 la~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (654)
++..... .....++..|+|||++.+..++.++|||||||++|||++ |+.||..... ......+. ....
T Consensus 188 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~------~~~~~~~~-~~~~- 259 (327)
T 1fvr_A 188 LSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC------AELYEKLP-QGYR- 259 (327)
T ss_dssp CEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH------HHHHHHGG-GTCC-
T ss_pred cCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcH------HHHHHHhh-cCCC-
Confidence 9875432 223345667999999988889999999999999999998 9999965321 11111111 1100
Q ss_pred hhhhHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCCC
Q 036334 569 EVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGET 621 (654)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 621 (654)
..........+.+++.+||+.||++|||++|+++.|+++.....
T Consensus 260 ---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 303 (327)
T 1fvr_A 260 ---------LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 303 (327)
T ss_dssp ---------CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSS
T ss_pred ---------CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhc
Confidence 01111222457778889999999999999999999999987653
No 140
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=3.4e-39 Score=330.74 Aligned_cols=245 Identities=25% Similarity=0.344 Sum_probs=196.0
Q ss_pred cccccCceeEEEEEec---CCcEEEEEEecccccC---HHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCCC
Q 036334 353 VLGKGSVGTSYKAVLE---EGTTVVVKRLKEVAVG---KREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAG 426 (654)
Q Consensus 353 ~lg~G~fg~Vy~~~~~---~g~~vavK~~~~~~~~---~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g 426 (654)
.||+|+||.||+|.+. .++.||||+++..... .+++.+|++++++++||||+++++++ ..+..++||||++++
T Consensus 24 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~ 102 (291)
T 1xbb_A 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELG 102 (291)
T ss_dssp EEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEEEECCTTE
T ss_pred ccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEEEEeCCCC
Confidence 7999999999999642 3678999999765322 46788999999999999999999998 667889999999999
Q ss_pred chhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCCC-----
Q 036334 427 SLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTT----- 501 (654)
Q Consensus 427 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~----- 501 (654)
+|.+++... ..+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++.......
T Consensus 103 ~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 176 (291)
T 1xbb_A 103 PLNKYLQQN-----RHVKDKNIIELVHQVSMGMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 176 (291)
T ss_dssp EHHHHHHHC-----TTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC
T ss_pred CHHHHHHhC-----cCCCHHHHHHHHHHHHHHHHHHHhCC-eEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCcccc
Confidence 999999742 35899999999999999999999998 9999999999999999999999999987664332
Q ss_pred --CCCccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhcc
Q 036334 502 --PPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRY 578 (654)
Q Consensus 502 --~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 578 (654)
...++..|+|||.+.+..++.++||||||+++|||++ |+.||...... . +...+..... .
T Consensus 177 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~------~-~~~~~~~~~~----------~ 239 (291)
T 1xbb_A 177 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS------E-VTAMLEKGER----------M 239 (291)
T ss_dssp ----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH------H-HHHHHHTTCC----------C
T ss_pred cccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH------H-HHHHHHcCCC----------C
Confidence 1234567999999988889999999999999999999 99999753221 1 1111111110 0
Q ss_pred CChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCCC
Q 036334 579 HNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGET 621 (654)
Q Consensus 579 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 621 (654)
.........+.+++.+||+.||++||++.++++.|+++....+
T Consensus 240 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~ 282 (291)
T 1xbb_A 240 GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVV 282 (291)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHh
Confidence 1111223467788889999999999999999999999876543
No 141
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.8e-39 Score=329.85 Aligned_cols=237 Identities=21% Similarity=0.309 Sum_probs=174.3
Q ss_pred hccccccCceeEEEEEe-cCCcEEEEEEecccc----cCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCC
Q 036334 351 AEVLGKGSVGTSYKAVL-EEGTTVVVKRLKEVA----VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPA 425 (654)
Q Consensus 351 ~~~lg~G~fg~Vy~~~~-~~g~~vavK~~~~~~----~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~ 425 (654)
.+.||+|+||.||+|.. .+|+.||+|++.... ...+.+.+|+.++++++||||+++++++.+.+..++||||+ +
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~-~ 96 (275)
T 2eue_A 18 VKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-G 96 (275)
T ss_dssp CC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEEECC-C
T ss_pred EEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEehhc-C
Confidence 47799999999999985 468999999997542 23557889999999999999999999999999999999999 6
Q ss_pred CchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC---CC
Q 036334 426 GSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT---TP 502 (654)
Q Consensus 426 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~---~~ 502 (654)
++|.+++.. ...+++..+++++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++...... ..
T Consensus 97 ~~l~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 170 (275)
T 2eue_A 97 NELFDYIVQ-----RDKMSEQEARRFFQQIISAVEYCHRHK-IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKT 170 (275)
T ss_dssp EEHHHHHHT-----SSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEECTTSCEEECCSSCC-----------
T ss_pred CcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-CeeccCChHhEEECCCCCEEEeecccceeccCcccccC
Confidence 788888763 345899999999999999999999998 999999999999999999999999999766443 23
Q ss_pred CCccccccCccccCCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccCCh
Q 036334 503 PTRVAGYRAPEVVETRKV-TFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNI 581 (654)
Q Consensus 503 ~~~~~~y~aPE~~~~~~~-~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 581 (654)
..++..|+|||++.+..+ +.++|||||||++|||++|+.||.... .......+..... ...
T Consensus 171 ~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~~~~~~~~~~~~------------~~~ 232 (275)
T 2eue_A 171 SCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES------IPVLFKNISNGVY------------TLP 232 (275)
T ss_dssp ----CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHTCC------------CCC
T ss_pred CCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHhCCC------------CCC
Confidence 456778999999987765 789999999999999999999996532 1121221111110 001
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 036334 582 EEEMVQLLQIAMGCVSTVPDQRPAMQEVVRM 612 (654)
Q Consensus 582 ~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 612 (654)
......+.+++.+||+.||++|||++|+++.
T Consensus 233 ~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 233 KFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp TTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred ccCCHHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 1122356778889999999999999999763
No 142
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=9.5e-40 Score=333.91 Aligned_cols=245 Identities=25% Similarity=0.353 Sum_probs=191.4
Q ss_pred HhhccccccCceeEEEEEec-CCcEEEEEEecccc--cCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCC
Q 036334 349 ASAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVA--VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPA 425 (654)
Q Consensus 349 ~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~ 425 (654)
.+.+.||+|+||.||++... ++..||+|++.... ...+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 25 ~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 104 (285)
T 3is5_A 25 IFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEG 104 (285)
T ss_dssp EEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCSC
T ss_pred eecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeCCC
Confidence 44688999999999999964 58899999987653 3457899999999999999999999999999999999999999
Q ss_pred CchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEE---CCCCCeEEeccCCCCCcCCC--
Q 036334 426 GSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILL---RPDHDACVSDFGLNPLFGNT-- 500 (654)
Q Consensus 426 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll---~~~~~~kl~Dfgla~~~~~~-- 500 (654)
|+|.+++..... ....+++..++.++.|++.||+|||+++ |+||||||+||++ +.++.+||+|||++......
T Consensus 105 ~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~~ 182 (285)
T 3is5_A 105 GELLERIVSAQA-RGKALSEGYVAELMKQMMNALAYFHSQH-VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH 182 (285)
T ss_dssp CBHHHHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEESSSSTTCCEEECCCCCCCC------
T ss_pred CcHHHHHHhhhh-cccCCCHHHHHHHHHHHHHHHHHHHhCC-EEECCCCHHHEEEecCCCCCCEEEEeeecceecCCccc
Confidence 999998854311 1245999999999999999999999998 9999999999999 45678999999999876433
Q ss_pred -CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccC
Q 036334 501 -TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYH 579 (654)
Q Consensus 501 -~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 579 (654)
....++..|+|||++. +.++.++||||||+++|||++|+.||..... ............... .
T Consensus 183 ~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~------~~~~~~~~~~~~~~~---------~ 246 (285)
T 3is5_A 183 STNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSL------EEVQQKATYKEPNYA---------V 246 (285)
T ss_dssp ----CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHCCCCCC---------C
T ss_pred CcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCH------HHHHhhhccCCcccc---------c
Confidence 3345677899999986 5789999999999999999999999975321 111111111110000 0
Q ss_pred ChHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 036334 580 NIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVR 611 (654)
Q Consensus 580 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 611 (654)
.......++.+++.+||+.||++|||++|+++
T Consensus 247 ~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 247 ECRPLTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp --CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred ccCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00011235667888999999999999999985
No 143
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1.8e-39 Score=330.64 Aligned_cols=240 Identities=24% Similarity=0.354 Sum_probs=194.3
Q ss_pred hhccccccCceeEEEEEec-CCcEEEEEEecccc----cCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecC
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVA----VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMP 424 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~ 424 (654)
+.+.||+|+||.||+|... ++..||+|++.... .....+.+|+.++++++||||+++++++.+.+..++||||++
T Consensus 13 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 92 (279)
T 3fdn_A 13 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 92 (279)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEecCC
Confidence 3578999999999999865 47799999986542 235678899999999999999999999999999999999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC--CC
Q 036334 425 AGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT--TP 502 (654)
Q Consensus 425 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~--~~ 502 (654)
+|+|.+++... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++...... ..
T Consensus 93 ~~~l~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~LH~~~-i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~ 166 (279)
T 3fdn_A 93 LGTVYRELQKL-----SKFDEQRTATYITELANALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTD 166 (279)
T ss_dssp TEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHTTT-CEECCCCGGGEEECTTSCEEECSCCEESCC-------
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC-EecccCChHhEEEcCCCCEEEEeccccccCCcccccc
Confidence 99999999743 35899999999999999999999998 999999999999999999999999998665433 33
Q ss_pred CCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccCChH
Q 036334 503 PTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIE 582 (654)
Q Consensus 503 ~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 582 (654)
..++..|+|||.+.+..++.++||||||+++|||++|+.||.... .......+..... ....
T Consensus 167 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~~~~------------~~~~ 228 (279)
T 3fdn_A 167 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT------YQETYKRISRVEF------------TFPD 228 (279)
T ss_dssp -CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHHTCC------------CCCT
T ss_pred cCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCc------HHHHHHHHHhCCC------------CCCC
Confidence 466788999999999999999999999999999999999997432 1111111111110 0111
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 036334 583 EEMVQLLQIAMGCVSTVPDQRPAMQEVVRMI 613 (654)
Q Consensus 583 ~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 613 (654)
.....+.+++.+||+.||++|||++|+++.-
T Consensus 229 ~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~ 259 (279)
T 3fdn_A 229 FVTEGARDLISRLLKHNPSQRPMLREVLEHP 259 (279)
T ss_dssp TSCHHHHHHHHHHCCSSGGGSCCHHHHHHCH
T ss_pred cCCHHHHHHHHHHhccChhhCCCHHHHhhCc
Confidence 1223566788899999999999999999753
No 144
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=1.8e-39 Score=341.51 Aligned_cols=238 Identities=23% Similarity=0.284 Sum_probs=193.7
Q ss_pred hhccccccCceeEEEEEecC-CcEEEEEEecccc----cCHHHHHHHHHHHhcc-CCCccccccEEEEeCCceEEEEEec
Q 036334 350 SAEVLGKGSVGTSYKAVLEE-GTTVVVKRLKEVA----VGKREFEMQMEVLGKI-KHDNVVPLRAFYYSKDEKLLVYDYM 423 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~~-g~~vavK~~~~~~----~~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e~~ 423 (654)
+.++||+|+||+||+|.... |+.||+|++++.. ...+.+..|..++..+ +||||+++++++.+.+..|+||||+
T Consensus 24 ~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E~~ 103 (353)
T 2i0e_A 24 FLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYV 103 (353)
T ss_dssp EEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEeCC
Confidence 35789999999999999764 7899999997642 3445678899999887 7999999999999999999999999
Q ss_pred CCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCC----
Q 036334 424 PAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN---- 499 (654)
Q Consensus 424 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~---- 499 (654)
++|+|.+++... ..+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++.....
T Consensus 104 ~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~ 177 (353)
T 2i0e_A 104 NGGDLMYHIQQV-----GRFKEPHAVFYAAEIAIGLFFLQSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT 177 (353)
T ss_dssp CSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCC
T ss_pred CCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC-EEeccCCHHHEEEcCCCcEEEEeCCcccccccCCcc
Confidence 999999999742 35899999999999999999999998 99999999999999999999999999976432
Q ss_pred CCCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccC
Q 036334 500 TTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYH 579 (654)
Q Consensus 500 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 579 (654)
.....+|+.|+|||++.+..++.++|||||||++|||++|+.||.... .......+...... .
T Consensus 178 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~------~~~~~~~i~~~~~~---------~-- 240 (353)
T 2i0e_A 178 TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED------EDELFQSIMEHNVA---------Y-- 240 (353)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHCCCC---------C--
T ss_pred cccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCC------HHHHHHHHHhCCCC---------C--
Confidence 234567888999999999999999999999999999999999997532 12222222221110 0
Q ss_pred ChHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 036334 580 NIEEEMVQLLQIAMGCVSTVPDQRPA-----MQEVVR 611 (654)
Q Consensus 580 ~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~evl~ 611 (654)
......++.+++.+||..||++||+ ++|+++
T Consensus 241 -p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 241 -PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp -CTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred -CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 1112235677888999999999995 466654
No 145
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=1.5e-39 Score=331.50 Aligned_cols=247 Identities=22% Similarity=0.337 Sum_probs=196.3
Q ss_pred hhccccccCceeEEEEEecC----CcEEEEEEecccc--cCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEec
Q 036334 350 SAEVLGKGSVGTSYKAVLEE----GTTVVVKRLKEVA--VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYM 423 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~~----g~~vavK~~~~~~--~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 423 (654)
+.+.||+|+||.||+|...+ +..||+|+++... ...+.+.+|+.++++++||||+++++++.+ +..++||||+
T Consensus 16 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~ 94 (281)
T 3cc6_A 16 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMELY 94 (281)
T ss_dssp EEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEEEEECC
T ss_pred EEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEEEEecC
Confidence 35789999999999998543 3369999987652 235678899999999999999999999764 4678999999
Q ss_pred CCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC---
Q 036334 424 PAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT--- 500 (654)
Q Consensus 424 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~--- 500 (654)
++++|.+++... ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++......
T Consensus 95 ~~~~L~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 169 (281)
T 3cc6_A 95 PYGELGHYLERN----KNSLKVLTLVLYSLQICKAMAYLESIN-CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYY 169 (281)
T ss_dssp TTCBHHHHHHHH----TTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEEEETTEEEECCCCGGGCC------
T ss_pred CCCCHHHHHHhc----cccCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCccceEEECCCCcEEeCccCCCccccccccc
Confidence 999999999743 245899999999999999999999998 999999999999999999999999998766433
Q ss_pred --CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhc
Q 036334 501 --TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMR 577 (654)
Q Consensus 501 --~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 577 (654)
....++..|+|||++.+..++.++||||||+++|||++ |+.||......+ . .... .....
T Consensus 170 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~---~---~~~~-~~~~~---------- 232 (281)
T 3cc6_A 170 KASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD---V---IGVL-EKGDR---------- 232 (281)
T ss_dssp ---CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG---H---HHHH-HHTCC----------
T ss_pred ccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH---H---HHHH-hcCCC----------
Confidence 22344567999999988899999999999999999998 999997533221 1 1111 11100
Q ss_pred cCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcC
Q 036334 578 YHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRG 619 (654)
Q Consensus 578 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 619 (654)
..........+.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 233 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 274 (281)
T 3cc6_A 233 LPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM 274 (281)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHh
Confidence 001111223577788899999999999999999999988653
No 146
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=4.5e-40 Score=344.08 Aligned_cols=248 Identities=21% Similarity=0.349 Sum_probs=182.1
Q ss_pred hhccccccCceeEEEEEec-CCcEEEEEEecccc-cCHHHHHHHHHHHhccC-CCccccccEEEEe--------CCceEE
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVA-VGKREFEMQMEVLGKIK-HDNVVPLRAFYYS--------KDEKLL 418 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~e~~~l~~l~-hpniv~l~~~~~~--------~~~~~l 418 (654)
+.++||+|+||.||+|... +|+.||||++.... ...+.+.+|+.+++++. ||||+++++++.. ....++
T Consensus 32 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~l 111 (337)
T 3ll6_A 32 VRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLL 111 (337)
T ss_dssp EEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEE
T ss_pred EEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceEEE
Confidence 4578999999999999964 68999999986543 33456889999999996 9999999999853 334799
Q ss_pred EEEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccC-CeecCCCCCCcEEECCCCCeEEeccCCCCCc
Q 036334 419 VYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSG-KIVHGNIKASNILLRPDHDACVSDFGLNPLF 497 (654)
Q Consensus 419 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~ 497 (654)
||||++ |+|.+++.... ....+++..++.++.|++.||+|||+++ +|+||||||+|||++.++.+||+|||++...
T Consensus 112 v~e~~~-g~L~~~l~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 188 (337)
T 3ll6_A 112 LTELCK-GQLVEFLKKME--SRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTI 188 (337)
T ss_dssp EEECCS-EEHHHHHHHHH--TTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBCC
T ss_pred EEEecC-CCHHHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCccceec
Confidence 999995 79999886432 2346999999999999999999999774 4999999999999999999999999999876
Q ss_pred CCCC----------------CCCccccccCcccc---CCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHH
Q 036334 498 GNTT----------------PPTRVAGYRAPEVV---ETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWV 558 (654)
Q Consensus 498 ~~~~----------------~~~~~~~y~aPE~~---~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~ 558 (654)
.... ...++..|+|||++ .+..++.++|||||||++|||++|+.||....... ..
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~------~~ 262 (337)
T 3ll6_A 189 SHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR------IV 262 (337)
T ss_dssp SSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---------------
T ss_pred cccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH------hh
Confidence 5321 22367779999998 56778999999999999999999999997532211 00
Q ss_pred HHHhhhchhhhhhhHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCC
Q 036334 559 QSVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGE 620 (654)
Q Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 620 (654)
...... .........+.+++.+||+.||++|||+.|+++.|+++....
T Consensus 263 ----~~~~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~ 310 (337)
T 3ll6_A 263 ----NGKYSI----------PPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAAR 310 (337)
T ss_dssp -------CCC----------CTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred ----cCcccC----------CcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence 000000 000111123667888999999999999999999999997654
No 147
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=6.4e-40 Score=339.97 Aligned_cols=255 Identities=27% Similarity=0.374 Sum_probs=201.1
Q ss_pred HhhccccccCceeEEEEEe------cCCcEEEEEEeccccc--CHHHHHHHHHHHhcc-CCCccccccEEEEeCC-ceEE
Q 036334 349 ASAEVLGKGSVGTSYKAVL------EEGTTVVVKRLKEVAV--GKREFEMQMEVLGKI-KHDNVVPLRAFYYSKD-EKLL 418 (654)
Q Consensus 349 ~~~~~lg~G~fg~Vy~~~~------~~g~~vavK~~~~~~~--~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~-~~~l 418 (654)
.+.+.||+|+||.||+|.. .+++.||||+++.... ..+.+.+|+.++.++ +||||+++++++...+ ..++
T Consensus 30 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~l 109 (316)
T 2xir_A 30 KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 109 (316)
T ss_dssp EEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEE
T ss_pred eeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceEE
Confidence 3457899999999999984 2467899999976533 345688999999999 6999999999988755 4899
Q ss_pred EEEecCCCchhhhhccCCCC-----------CCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeE
Q 036334 419 VYDYMPAGSLSALLHGSRGS-----------GRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDAC 487 (654)
Q Consensus 419 v~e~~~~g~L~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~k 487 (654)
||||+++|+|.+++...... ....+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+|
T Consensus 110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-i~H~dikp~Nil~~~~~~~k 188 (316)
T 2xir_A 110 IVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSEKNVVK 188 (316)
T ss_dssp EEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEE
T ss_pred EEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC-cccccCccceEEECCCCCEE
Confidence 99999999999999754321 0123899999999999999999999998 99999999999999999999
Q ss_pred EeccCCCCCcCCCC------CCCccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHH
Q 036334 488 VSDFGLNPLFGNTT------PPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQS 560 (654)
Q Consensus 488 l~Dfgla~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~pf~~~~~~~~~~~~~~~~~ 560 (654)
|+|||++....... ...++..|+|||++.+..++.++|||||||++|||++ |..||......+ .+..
T Consensus 189 l~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~------~~~~ 262 (316)
T 2xir_A 189 ICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE------EFCR 262 (316)
T ss_dssp ECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSH------HHHH
T ss_pred ECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhH------HHHH
Confidence 99999998664332 2234567999999998999999999999999999998 999997543211 1111
Q ss_pred HhhhchhhhhhhHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCC
Q 036334 561 VVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGE 620 (654)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 620 (654)
........ ........++.+++.+||+.||++|||+.|+++.|+++.+..
T Consensus 263 ~~~~~~~~----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 312 (316)
T 2xir_A 263 RLKEGTRM----------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 312 (316)
T ss_dssp HHHHTCCC----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HhccCccC----------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 11111100 001112235778888999999999999999999999987543
No 148
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=4.1e-39 Score=327.52 Aligned_cols=243 Identities=20% Similarity=0.292 Sum_probs=195.9
Q ss_pred HHhhccccccCceeEEEEEec-CCcEEEEEEeccc-ccCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCC
Q 036334 348 RASAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEV-AVGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPA 425 (654)
Q Consensus 348 ~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~-~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~ 425 (654)
|.+.+.||+|+||.||+|... ++..||+|++... ....+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 90 (277)
T 3f3z_A 11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTG 90 (277)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred EEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEeccCC
Confidence 345678999999999999965 4778999998765 34567899999999999999999999999999999999999999
Q ss_pred CchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEE---CCCCCeEEeccCCCCCcCCC--
Q 036334 426 GSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILL---RPDHDACVSDFGLNPLFGNT-- 500 (654)
Q Consensus 426 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll---~~~~~~kl~Dfgla~~~~~~-- 500 (654)
++|.+++.. ...+++..++.++.|++.||+|||+++ |+||||||+||++ +.++.+||+|||++......
T Consensus 91 ~~L~~~~~~-----~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~ 164 (277)
T 3f3z_A 91 GELFERVVH-----KRVFRESDAARIMKDVLSAVAYCHKLN-VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM 164 (277)
T ss_dssp CBHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSC
T ss_pred CcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccc
Confidence 999998874 245899999999999999999999998 9999999999999 78899999999998765433
Q ss_pred -CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccC
Q 036334 501 -TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYH 579 (654)
Q Consensus 501 -~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 579 (654)
....++..|+|||++.+ .++.++||||||+++|||++|+.||..... ......+........ .. ...
T Consensus 165 ~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~------~~~~~~~~~~~~~~~--~~---~~~ 232 (277)
T 3f3z_A 165 MRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTD------SEVMLKIREGTFTFP--EK---DWL 232 (277)
T ss_dssp BCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHCCCCCC--HH---HHT
T ss_pred hhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCH------HHHHHHHHhCCCCCC--ch---hhh
Confidence 33457788999999865 499999999999999999999999975322 111222111111000 00 000
Q ss_pred ChHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 036334 580 NIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVR 611 (654)
Q Consensus 580 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 611 (654)
.....+.+++.+||+.||++|||+.++++
T Consensus 233 ---~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 233 ---NVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp ---TSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred ---cCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 12245777888999999999999999986
No 149
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=342.45 Aligned_cols=241 Identities=20% Similarity=0.312 Sum_probs=189.2
Q ss_pred hhccccccCceeEEEEEecCCcEEEEEEecccccC---HHHHHHHHHHHhccCC--CccccccEEEEeCCceEEEEEecC
Q 036334 350 SAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVG---KREFEMQMEVLGKIKH--DNVVPLRAFYYSKDEKLLVYDYMP 424 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~---~~~~~~e~~~l~~l~h--pniv~l~~~~~~~~~~~lv~e~~~ 424 (654)
+.+.||+|+||.||++...+++.||||++...... .+.+.+|+.++++++| |||+++++++.+++..++||| +.
T Consensus 13 i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~ 91 (343)
T 3dbq_A 13 ILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CG 91 (343)
T ss_dssp EEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC-CC
T ss_pred EEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEe-CC
Confidence 35789999999999999888999999998755333 3568899999999986 999999999999999999999 55
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCCC---
Q 036334 425 AGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTT--- 501 (654)
Q Consensus 425 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~--- 501 (654)
+|+|.+++.. ...+++..++.++.|++.||+|||+++ |+||||||+|||++ ++.+||+|||++.......
T Consensus 92 ~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~al~~lH~~~-iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~~ 164 (343)
T 3dbq_A 92 NIDLNSWLKK-----KKSIDPWERKSYWKNMLEAVHTIHQHG-IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSV 164 (343)
T ss_dssp SEEHHHHHHH-----SCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEE-TTEEEECCCSSSCCC-------
T ss_pred CCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCcceEEEE-CCcEEEeecccccccCcccccc
Confidence 8899999974 345899999999999999999999998 99999999999997 6789999999998764332
Q ss_pred ---CCCccccccCccccCC-----------CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchh
Q 036334 502 ---PPTRVAGYRAPEVVET-----------RKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWT 567 (654)
Q Consensus 502 ---~~~~~~~y~aPE~~~~-----------~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 567 (654)
...+++.|+|||++.+ ..++.++|||||||++|||++|+.||..... ....+.........
T Consensus 165 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----~~~~~~~~~~~~~~ 239 (343)
T 3dbq_A 165 VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-----QISKLHAIIDPNHE 239 (343)
T ss_dssp -----CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCS-----HHHHHHHHHCTTSC
T ss_pred cCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhh-----HHHHHHHHhcCCcc
Confidence 3457888999999864 6789999999999999999999999964321 11112221111110
Q ss_pred hhhhhHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 036334 568 AEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMI 613 (654)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 613 (654)
. ........++.+++.+||+.||++|||+.|+++.-
T Consensus 240 ~----------~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp 275 (343)
T 3dbq_A 240 I----------EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 275 (343)
T ss_dssp C----------CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred c----------CCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCc
Confidence 0 00111123567788899999999999999998753
No 150
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=6e-39 Score=327.33 Aligned_cols=252 Identities=21% Similarity=0.356 Sum_probs=200.7
Q ss_pred HhhccccccCceeEEEEEec-CCcEEEEEEeccccc-------CHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEE
Q 036334 349 ASAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAV-------GKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVY 420 (654)
Q Consensus 349 ~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~-------~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 420 (654)
.+.+.||+|+||.||+|... +|+.||+|+++.... ..+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 8 ~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 87 (283)
T 3bhy_A 8 EMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLIL 87 (283)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEEEE
Confidence 34678999999999999976 589999999875421 3577899999999999999999999999999999999
Q ss_pred EecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCC----CeEEeccCCCCC
Q 036334 421 DYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDH----DACVSDFGLNPL 496 (654)
Q Consensus 421 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~----~~kl~Dfgla~~ 496 (654)
||+++++|.+++.. ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++ .+||+|||++..
T Consensus 88 e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~ 161 (283)
T 3bhy_A 88 ELVSGGELFDFLAE-----KESLTEDEATQFLKQILDGVHYLHSKR-IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK 161 (283)
T ss_dssp ECCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred eecCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCChHHEEEecCCCCCCceEEEeccccee
Confidence 99999999999973 245899999999999999999999998 99999999999999877 799999999876
Q ss_pred cCCC---CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhH
Q 036334 497 FGNT---TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDV 573 (654)
Q Consensus 497 ~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 573 (654)
.... ....++..|+|||++.+..++.++||||||+++|||++|+.||..... ......+...... .+.
T Consensus 162 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~~~---~~~ 232 (283)
T 3bhy_A 162 IEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETK------QETLTNISAVNYD---FDE 232 (283)
T ss_dssp CC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHTTCCC---CCH
T ss_pred ccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcch------HHHHHHhHhcccC---Ccc
Confidence 6433 234567789999999989999999999999999999999999975321 1111111111100 000
Q ss_pred hhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHH--HHHhhhcCC
Q 036334 574 ELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVR--MIENMNRGE 620 (654)
Q Consensus 574 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~--~L~~~~~~~ 620 (654)
.. . ......+.+++.+||+.||++|||+.|+++ .++++....
T Consensus 233 ~~--~---~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~~ 276 (283)
T 3bhy_A 233 EY--F---SNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRRN 276 (283)
T ss_dssp HH--H---TTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHHCC
T ss_pred hh--c---ccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHHHh
Confidence 00 0 011235677888999999999999999997 467776554
No 151
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=1.8e-39 Score=337.64 Aligned_cols=254 Identities=24% Similarity=0.351 Sum_probs=202.2
Q ss_pred HhhccccccCceeEEEEEec------CCcEEEEEEeccccc--CHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEE
Q 036334 349 ASAEVLGKGSVGTSYKAVLE------EGTTVVVKRLKEVAV--GKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVY 420 (654)
Q Consensus 349 ~~~~~lg~G~fg~Vy~~~~~------~g~~vavK~~~~~~~--~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 420 (654)
.+.+.||+|+||.||+|... .++.||||++..... ...++.+|+.++++++||||+++++++.+.+..++||
T Consensus 28 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 107 (322)
T 1p4o_A 28 TMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIM 107 (322)
T ss_dssp EEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEE
T ss_pred eeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccEEEE
Confidence 34578999999999999854 367899999975432 3346889999999999999999999999999999999
Q ss_pred EecCCCchhhhhccCC-----CCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCC
Q 036334 421 DYMPAGSLSALLHGSR-----GSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNP 495 (654)
Q Consensus 421 e~~~~g~L~~~l~~~~-----~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~ 495 (654)
||+++|+|.+++...+ ......+++..+++++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++.
T Consensus 108 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~NIli~~~~~~kl~Dfg~~~ 186 (322)
T 1p4o_A 108 ELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK-FVHRDLAARNCMVAEDFTVKIGDFGMTR 186 (322)
T ss_dssp ECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCSCCSGGGEEECTTCCEEECCTTCCC
T ss_pred EeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC-CccCCCccceEEEcCCCeEEECcCcccc
Confidence 9999999999997431 011245799999999999999999999998 9999999999999999999999999987
Q ss_pred CcCCC------CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhchhh
Q 036334 496 LFGNT------TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTA 568 (654)
Q Consensus 496 ~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (654)
..... ....++..|+|||++.+..++.++||||||+++|||++ |..||..... ......+.....
T Consensus 187 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~------~~~~~~~~~~~~-- 258 (322)
T 1p4o_A 187 DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN------EQVLRFVMEGGL-- 258 (322)
T ss_dssp GGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH------HHHHHHHHTTCC--
T ss_pred ccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH------HHHHHHHHcCCc--
Confidence 65332 12334567999999998899999999999999999999 8899865321 111221111110
Q ss_pred hhhhHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCC
Q 036334 569 EVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGE 620 (654)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 620 (654)
..........+.+++.+||+.||++|||+.|+++.|+++....
T Consensus 259 ---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~~ 301 (322)
T 1p4o_A 259 ---------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPG 301 (322)
T ss_dssp ---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTT
T ss_pred ---------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhccC
Confidence 0011122345777888999999999999999999999886543
No 152
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1.1e-39 Score=352.12 Aligned_cols=245 Identities=18% Similarity=0.239 Sum_probs=194.2
Q ss_pred hhccccccCceeEEEEEecC-CcEEEEEEecccc----cCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecC
Q 036334 350 SAEVLGKGSVGTSYKAVLEE-GTTVVVKRLKEVA----VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMP 424 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~~-g~~vavK~~~~~~----~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~ 424 (654)
+.++||+|+||+||+|...+ ++.||+|++++.. .....+.+|+.++..++||||++++++|.+++..++||||++
T Consensus 78 ~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~Ey~~ 157 (437)
T 4aw2_A 78 ILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYV 157 (437)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEecCC
Confidence 35789999999999999764 7899999997532 223348889999999999999999999999999999999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC----
Q 036334 425 AGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT---- 500 (654)
Q Consensus 425 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~---- 500 (654)
+|+|.+++... ...+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 158 gg~L~~~l~~~----~~~l~e~~~~~~~~qi~~aL~~LH~~g-iiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~~~ 232 (437)
T 4aw2_A 158 GGDLLTLLSKF----EDRLPEEMARFYLAEMVIAIDSVHQLH-YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQ 232 (437)
T ss_dssp TCBHHHHHHTT----TTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEE
T ss_pred CCcHHHHHHHc----cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEecccCHHHeeEcCCCCEEEcchhhhhhcccCCCcc
Confidence 99999999742 245999999999999999999999998 999999999999999999999999999765432
Q ss_pred -CCCCccccccCccccC-----CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHh
Q 036334 501 -TPPTRVAGYRAPEVVE-----TRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVE 574 (654)
Q Consensus 501 -~~~~~~~~y~aPE~~~-----~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 574 (654)
....+|+.|+|||++. ...++.++|||||||++|||++|+.||.... .......+......
T Consensus 233 ~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~------~~~~~~~i~~~~~~------- 299 (437)
T 4aw2_A 233 SSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAES------LVETYGKIMNHKER------- 299 (437)
T ss_dssp CCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHTHHHH-------
T ss_pred cccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCC------hhHHHHhhhhcccc-------
Confidence 2346788999999986 5678999999999999999999999997532 22222222211100
Q ss_pred hhccCChHHHHHHHHHHHhhccCCCCCC--CCCHHHHHHH
Q 036334 575 LMRYHNIEEEMVQLLQIAMGCVSTVPDQ--RPAMQEVVRM 612 (654)
Q Consensus 575 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPs~~evl~~ 612 (654)
+...........++.+++.+|+..+|++ ||+++|+++.
T Consensus 300 ~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 300 FQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp CCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred ccCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 0000110112234566777999888888 9999999763
No 153
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=3.7e-39 Score=329.04 Aligned_cols=243 Identities=21% Similarity=0.305 Sum_probs=195.7
Q ss_pred hhccccccCceeEEEEEec-CCcEEEEEEecccccC---HHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCC
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAVG---KREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPA 425 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~ 425 (654)
+.+.||+|+||.||+|... +|+.||+|++...... .+.+.+|+.++++++||||+++++++.+++..++||||+++
T Consensus 10 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~ 89 (284)
T 3kk8_A 10 VKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTG 89 (284)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred hhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEecCCC
Confidence 3578999999999999865 5889999999765433 35678899999999999999999999999999999999999
Q ss_pred CchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCC---eEEeccCCCCCcCCCC-
Q 036334 426 GSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHD---ACVSDFGLNPLFGNTT- 501 (654)
Q Consensus 426 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~---~kl~Dfgla~~~~~~~- 501 (654)
++|.+.+... ..+++..++.++.|++.||+|||+++ |+||||||+||+++.++. +||+|||++.......
T Consensus 90 ~~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~ 163 (284)
T 3kk8_A 90 GELFEDIVAR-----EFYSEADASHCIQQILESIAYCHSNG-IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA 163 (284)
T ss_dssp CBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSCB
T ss_pred CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC-cCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCcc
Confidence 9999888732 45899999999999999999999998 999999999999987665 9999999997665432
Q ss_pred --CCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccC
Q 036334 502 --PPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYH 579 (654)
Q Consensus 502 --~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 579 (654)
...++..|+|||++.+..++.++||||||+++|||++|+.||..... ......+....... .....
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~------~~~~~~~~~~~~~~-----~~~~~- 231 (284)
T 3kk8_A 164 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ------HRLYAQIKAGAYDY-----PSPEW- 231 (284)
T ss_dssp CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHTCCCC-----CTTTT-
T ss_pred ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCch------hHHHHHHHhccccC-----Cchhh-
Confidence 34577889999999999999999999999999999999999965321 12222221111100 00000
Q ss_pred ChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 036334 580 NIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRM 612 (654)
Q Consensus 580 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 612 (654)
.....++.+++.+||+.||++|||++|+++.
T Consensus 232 --~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 232 --DTVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp --TTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred --cccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 1122356778889999999999999999884
No 154
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=3.9e-39 Score=327.90 Aligned_cols=239 Identities=21% Similarity=0.363 Sum_probs=177.2
Q ss_pred hhccccccCceeEEEEEe-cCCcEEEEEEecccc----cCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecC
Q 036334 350 SAEVLGKGSVGTSYKAVL-EEGTTVVVKRLKEVA----VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMP 424 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~-~~g~~vavK~~~~~~----~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~ 424 (654)
+.+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|+.++++++||||+++++++.+.+..++||||++
T Consensus 15 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 94 (278)
T 3cok_A 15 VGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCH 94 (278)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred eeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEecCC
Confidence 357899999999999996 468999999996542 224678899999999999999999999999999999999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC----
Q 036334 425 AGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT---- 500 (654)
Q Consensus 425 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~---- 500 (654)
+++|.+++... ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++......
T Consensus 95 ~~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~ 169 (278)
T 3cok_A 95 NGEMNRYLKNR----VKPFSENEARHFMHQIITGMLYLHSHG-ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKH 169 (278)
T ss_dssp TEEHHHHHHTC----SSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSSCCGGGEEECTTCCEEECCCTTCEECC------
T ss_pred CCcHHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCCEEEEeecceeeccCCCCcc
Confidence 99999999743 246899999999999999999999998 999999999999999999999999998765432
Q ss_pred CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccCC
Q 036334 501 TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHN 580 (654)
Q Consensus 501 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 580 (654)
....++..|+|||.+.+..++.++||||||+++|||++|+.||......+. ......... ..
T Consensus 170 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~------~~~~~~~~~------------~~ 231 (278)
T 3cok_A 170 YTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT------LNKVVLADY------------EM 231 (278)
T ss_dssp ----------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----------CCSSCC------------CC
T ss_pred eeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH------HHHHhhccc------------CC
Confidence 234567789999999988999999999999999999999999976432221 011110000 00
Q ss_pred hHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 036334 581 IEEEMVQLLQIAMGCVSTVPDQRPAMQEVVR 611 (654)
Q Consensus 581 ~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 611 (654)
......++.+++.+||+.||++|||++++++
T Consensus 232 ~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 232 PSFLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp CTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 1112235677888999999999999999986
No 155
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=1.2e-39 Score=341.80 Aligned_cols=245 Identities=21% Similarity=0.313 Sum_probs=191.9
Q ss_pred HHhhccccccCceeEEEEEec-CCcEEEEEEecccccCHHHHHHHHHHHhcc-CCCccccccEEEEeCCceEEEEEecCC
Q 036334 348 RASAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAVGKREFEMQMEVLGKI-KHDNVVPLRAFYYSKDEKLLVYDYMPA 425 (654)
Q Consensus 348 ~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e~~~~ 425 (654)
|.+.+.||+|+||.||++... +|+.||||+++.... ...+|++++.++ +||||+++++++.+++..++||||+++
T Consensus 24 y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~---~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~g 100 (342)
T 2qr7_A 24 YEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR---DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKG 100 (342)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC---CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC---ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCC
Confidence 345678999999999999965 588999999976543 235678888777 799999999999999999999999999
Q ss_pred CchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCC-C---CeEEeccCCCCCcCCC-
Q 036334 426 GSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPD-H---DACVSDFGLNPLFGNT- 500 (654)
Q Consensus 426 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~-~---~~kl~Dfgla~~~~~~- 500 (654)
|+|.+++.. ...+++..+..++.||+.||+|||+++ |+||||||+|||+..+ + .+||+|||++......
T Consensus 101 g~L~~~i~~-----~~~~~~~~~~~~~~qi~~al~~lH~~g-ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~ 174 (342)
T 2qr7_A 101 GELLDKILR-----QKFFSEREASAVLFTITKTVEYLHAQG-VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN 174 (342)
T ss_dssp CBHHHHHHT-----CTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTT
T ss_pred CcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-cEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCC
Confidence 999999973 345899999999999999999999998 9999999999998543 3 4999999999865432
Q ss_pred ---CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhc
Q 036334 501 ---TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMR 577 (654)
Q Consensus 501 ---~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 577 (654)
....+++.|+|||++.+..++.++|||||||++|||++|+.||...... ........+....... ....
T Consensus 175 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~---~~~~~~~~i~~~~~~~-----~~~~ 246 (342)
T 2qr7_A 175 GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDD---TPEEILARIGSGKFSL-----SGGY 246 (342)
T ss_dssp CCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTS---CHHHHHHHHHHCCCCC-----CSTT
T ss_pred CceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcC---CHHHHHHHHccCCccc-----Cccc
Confidence 2345678899999998888999999999999999999999999753221 1222222222211100 0000
Q ss_pred cCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 036334 578 YHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRM 612 (654)
Q Consensus 578 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 612 (654)
+. ....++.+++.+||..||++|||+.|+++.
T Consensus 247 ~~---~~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 247 WN---SVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp TT---TSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred cc---cCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 11 122356677889999999999999999874
No 156
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=5.2e-39 Score=343.22 Aligned_cols=240 Identities=20% Similarity=0.303 Sum_probs=189.6
Q ss_pred hhccccccCceeEEEEEecCCcEEEEEEeccccc---CHHHHHHHHHHHhccC--CCccccccEEEEeCCceEEEEEecC
Q 036334 350 SAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAV---GKREFEMQMEVLGKIK--HDNVVPLRAFYYSKDEKLLVYDYMP 424 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~---~~~~~~~e~~~l~~l~--hpniv~l~~~~~~~~~~~lv~e~~~ 424 (654)
+.+.||+|+||.||++...+++.||||++..... ..+.+.+|++++++++ ||||+++++++..++..++||| +.
T Consensus 60 ~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E-~~ 138 (390)
T 2zmd_A 60 ILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CG 138 (390)
T ss_dssp EEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-CC
T ss_pred EEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-cC
Confidence 3578999999999999988899999999875433 2456889999999996 5999999999999999999999 56
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC----
Q 036334 425 AGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT---- 500 (654)
Q Consensus 425 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~---- 500 (654)
+++|.+++... ..+++..++.++.||+.||+|||+.+ |+||||||+|||++ ++.+||+|||++......
T Consensus 139 ~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~lH~~~-ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~~ 211 (390)
T 2zmd_A 139 NIDLNSWLKKK-----KSIDPWERKSYWKNMLEAVHTIHQHG-IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSV 211 (390)
T ss_dssp SEEHHHHHHHC-----SSCCHHHHHHHHHHHHHHHHHHHTTT-CCCCCCCGGGEEES-SSCEEECCCSSSCCC-------
T ss_pred CCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHEEEE-CCeEEEEecCccccccCCCccc
Confidence 88999999743 35899999999999999999999998 99999999999996 589999999999876432
Q ss_pred --CCCCccccccCccccCC-----------CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchh
Q 036334 501 --TPPTRVAGYRAPEVVET-----------RKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWT 567 (654)
Q Consensus 501 --~~~~~~~~y~aPE~~~~-----------~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 567 (654)
....+++.|+|||++.+ ..++.++|||||||++|||++|+.||..... ....+..+......
T Consensus 212 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~-----~~~~~~~~~~~~~~ 286 (390)
T 2zmd_A 212 VKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-----QISKLHAIIDPNHE 286 (390)
T ss_dssp --CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCC-----HHHHHHHHHCTTSC
T ss_pred cCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhH-----HHHHHHHHhCcccc
Confidence 23457888999999864 4689999999999999999999999964321 11222222211110
Q ss_pred hhhhhHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 036334 568 AEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRM 612 (654)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 612 (654)
. . ..... ..++.+++.+||+.||++|||+.|+++.
T Consensus 287 ~-----~--~~~~~---~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 287 I-----E--FPDIP---EKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp C-----C--CCCCS---CHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred C-----C--CCccc---hHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 0 0 00111 2356778889999999999999999864
No 157
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=4.8e-39 Score=344.32 Aligned_cols=258 Identities=21% Similarity=0.275 Sum_probs=198.5
Q ss_pred HhhccccccCceeEEEEEec-CCcEEEEEEecccccCHHHHHHHHHHHhccC--------CCccccccEEEE----eCCc
Q 036334 349 ASAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAVGKREFEMQMEVLGKIK--------HDNVVPLRAFYY----SKDE 415 (654)
Q Consensus 349 ~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~--------hpniv~l~~~~~----~~~~ 415 (654)
.+.+.||+|+||+||+|... +++.||||+++......+.+.+|+.++++++ |+||+++++++. +...
T Consensus 40 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~ 119 (397)
T 1wak_A 40 HVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTH 119 (397)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEE
T ss_pred EEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCce
Confidence 34578999999999999854 5889999999876555677889999998885 788999999987 4557
Q ss_pred eEEEEEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcc-CCeecCCCCCCcEEECCCC----------
Q 036334 416 KLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS-GKIVHGNIKASNILLRPDH---------- 484 (654)
Q Consensus 416 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~ivHrDlk~~NIll~~~~---------- 484 (654)
.++||||+ +++|.+.+... ....+++..++.++.||+.||+|||++ + |+||||||+|||++.++
T Consensus 120 ~~lv~e~~-~~~l~~~~~~~---~~~~~~~~~~~~i~~qi~~aL~~lH~~~g-ivHrDikp~NIll~~~~~~~~~~~~~~ 194 (397)
T 1wak_A 120 ICMVFEVL-GHHLLKWIIKS---NYQGLPLPCVKKIIQQVLQGLDYLHTKCR-IIHTDIKPENILLSVNEQYIRRLAAEA 194 (397)
T ss_dssp EEEEECCC-CCBHHHHHHHT---TTSCCCHHHHHHHHHHHHHHHHHHHHTTC-EECCCCSGGGEEECCCHHHHHHHHHHH
T ss_pred EEEEEecc-CccHHHHHHhc---ccCCCCHHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHeeEeccchhhhhhhhhh
Confidence 89999999 55666665433 234599999999999999999999998 7 99999999999999775
Q ss_pred ---------------------------------------CeEEeccCCCCCcCCC-CCCCccccccCccccCCCCCCcch
Q 036334 485 ---------------------------------------DACVSDFGLNPLFGNT-TPPTRVAGYRAPEVVETRKVTFKS 524 (654)
Q Consensus 485 ---------------------------------------~~kl~Dfgla~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~ 524 (654)
.+||+|||++...... ....++..|+|||++.+..++.++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~ 274 (397)
T 1wak_A 195 TEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPA 274 (397)
T ss_dssp C---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSCCCTHH
T ss_pred HHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCCCCcHH
Confidence 7999999999766543 345678889999999999999999
Q ss_pred hHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhh---h---------chhhhhh------------------hHh
Q 036334 525 DVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVR---E---------EWTAEVF------------------DVE 574 (654)
Q Consensus 525 DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~---~---------~~~~~~~------------------~~~ 574 (654)
|||||||++|||++|+.||......+.......+..+.. . .+....+ +..
T Consensus 275 DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (397)
T 1wak_A 275 DIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVL 354 (397)
T ss_dssp HHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHH
T ss_pred HHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhh
Confidence 999999999999999999986554432211111111110 0 0000000 000
Q ss_pred hhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 036334 575 LMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVR 611 (654)
Q Consensus 575 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 611 (654)
........+....+.+|+.+||+.||++|||++|+++
T Consensus 355 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 355 VEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp HHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred hhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 0112234566678899999999999999999999986
No 158
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=2e-39 Score=335.29 Aligned_cols=251 Identities=22% Similarity=0.287 Sum_probs=190.7
Q ss_pred hhccccccCceeEEEEEe-cCCcEEEEEEeccccc------CHHHHHHHHHHHhccC---CCccccccEEEEeCC-----
Q 036334 350 SAEVLGKGSVGTSYKAVL-EEGTTVVVKRLKEVAV------GKREFEMQMEVLGKIK---HDNVVPLRAFYYSKD----- 414 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~-~~g~~vavK~~~~~~~------~~~~~~~e~~~l~~l~---hpniv~l~~~~~~~~----- 414 (654)
+.+.||+|+||+||+|.. .+|+.||||+++.... ....+.+|++++++++ ||||++++++|....
T Consensus 13 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~~ 92 (308)
T 3g33_A 13 PVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREI 92 (308)
T ss_dssp EEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSEE
T ss_pred EEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCce
Confidence 457899999999999995 4689999999874321 2346777887776664 999999999998765
Q ss_pred ceEEEEEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCC
Q 036334 415 EKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLN 494 (654)
Q Consensus 415 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla 494 (654)
..++||||+. |+|.+++.... ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++
T Consensus 93 ~~~lv~e~~~-~~L~~~~~~~~---~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~Nil~~~~~~~kl~Dfg~a 167 (308)
T 3g33_A 93 KVTLVFEHVD-QDLRTYLDKAP---PPGLPAETIKDLMRQFLRGLDFLHANC-IVHRDLKPENILVTSGGTVKLADFGLA 167 (308)
T ss_dssp EEEEEEECCC-CBHHHHHHTCC---TTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCTTTEEECTTSCEEECSCSCT
T ss_pred eEEEEehhhh-cCHHHHHhhcc---CCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEcCCCCEEEeeCccc
Confidence 4799999996 59999997542 234999999999999999999999998 999999999999999999999999999
Q ss_pred CCcCCCCC---CCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhh-------
Q 036334 495 PLFGNTTP---PTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVRE------- 564 (654)
Q Consensus 495 ~~~~~~~~---~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~------- 564 (654)
........ ..++..|+|||++.+..++.++|||||||++|||++|+.||...... ..+..+...
T Consensus 168 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~------~~~~~i~~~~~~~~~~ 241 (308)
T 3g33_A 168 RIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA------DQLGKIFDLIGLPPED 241 (308)
T ss_dssp TTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHH------HHHHHHHHHHCCCCTT
T ss_pred cccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHHHhCCCChh
Confidence 87654332 35577899999999999999999999999999999999999754321 111111110
Q ss_pred chhhhhh--hHhhhc--cCC----hHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 036334 565 EWTAEVF--DVELMR--YHN----IEEEMVQLLQIAMGCVSTVPDQRPAMQEVVR 611 (654)
Q Consensus 565 ~~~~~~~--~~~~~~--~~~----~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 611 (654)
.+..... ...+.. ... ..+....+.+++.+||+.||++|||+.|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 242 DWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp TSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 0000000 000000 000 0112245677888999999999999999986
No 159
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=7e-39 Score=354.07 Aligned_cols=243 Identities=27% Similarity=0.332 Sum_probs=197.1
Q ss_pred hccccccCceeEEEEEec-CCcEEEEEEeccc----ccCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCC
Q 036334 351 AEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEV----AVGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPA 425 (654)
Q Consensus 351 ~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~----~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~ 425 (654)
.++||+|+||.||+|... +|+.||+|++... ......+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 189 ~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy~~g 268 (576)
T 2acx_A 189 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNG 268 (576)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEcCCC
Confidence 478999999999999965 6899999999754 23345688999999999999999999999999999999999999
Q ss_pred CchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC---CC
Q 036334 426 GSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT---TP 502 (654)
Q Consensus 426 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~---~~ 502 (654)
|+|.+++.... ...+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++...... ..
T Consensus 269 g~L~~~l~~~~---~~~l~e~~~~~i~~qIl~aL~yLH~~g-IvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~~~~ 344 (576)
T 2acx_A 269 GDLKFHIYHMG---QAGFPEARAVFYAAEICCGLEDLHRER-IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKG 344 (576)
T ss_dssp CBHHHHHHSSS---SCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCEEC
T ss_pred CcHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHHCC-EeccCCchheEEEeCCCCeEEEecccceecccCccccc
Confidence 99999997532 345899999999999999999999998 999999999999999999999999999876543 23
Q ss_pred CCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccCChH
Q 036334 503 PTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIE 582 (654)
Q Consensus 503 ~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 582 (654)
..+|+.|+|||++.+..++.++|||||||++|||++|+.||....... .... +...+.... .....
T Consensus 345 ~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~--~~~~-i~~~i~~~~-----------~~~p~ 410 (576)
T 2acx_A 345 RVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI--KREE-VERLVKEVP-----------EEYSE 410 (576)
T ss_dssp CCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCC--CHHH-HHHHHHHCC-----------CCCCT
T ss_pred cCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccch--hHHH-HHHHhhccc-----------ccCCc
Confidence 567888999999999899999999999999999999999997643221 1111 111111100 00011
Q ss_pred HHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 036334 583 EEMVQLLQIAMGCVSTVPDQRP-----AMQEVVR 611 (654)
Q Consensus 583 ~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~ 611 (654)
....++.+++.+||+.||++|| +++|+++
T Consensus 411 ~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 411 RFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred cCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 1223566788899999999999 7788865
No 160
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=5.8e-39 Score=337.22 Aligned_cols=250 Identities=21% Similarity=0.222 Sum_probs=193.0
Q ss_pred HHhhccccccCceeEEEEEec-CCcEEEEEEecccc------cCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEE
Q 036334 348 RASAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVA------VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVY 420 (654)
Q Consensus 348 ~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~------~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 420 (654)
|.+.+.||+|+||.||+|... ++..||+|++.... ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 28 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 107 (345)
T 3hko_A 28 YHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVM 107 (345)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEEEE
Confidence 345788999999999999864 58899999986542 23467889999999999999999999999999999999
Q ss_pred EecCCCchhhhhccCCCC-----------------------------------CCCCCCHHHHHHHHHHHHHHHHHhhcc
Q 036334 421 DYMPAGSLSALLHGSRGS-----------------------------------GRTPLDWDNRMRIALSAARGLAHLHVS 465 (654)
Q Consensus 421 e~~~~g~L~~~l~~~~~~-----------------------------------~~~~l~~~~~~~i~~~ia~~l~~LH~~ 465 (654)
||+++|+|.+++...... ....+++..++.++.|++.||+|||++
T Consensus 108 e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~ 187 (345)
T 3hko_A 108 ELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ 187 (345)
T ss_dssp ECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred eCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC
Confidence 999999999998521100 011246778889999999999999999
Q ss_pred CCeecCCCCCCcEEECCCC--CeEEeccCCCCCcCC--------CCCCCccccccCccccCC--CCCCcchhHHHHHHHH
Q 036334 466 GKIVHGNIKASNILLRPDH--DACVSDFGLNPLFGN--------TTPPTRVAGYRAPEVVET--RKVTFKSDVYSFGVLL 533 (654)
Q Consensus 466 ~~ivHrDlk~~NIll~~~~--~~kl~Dfgla~~~~~--------~~~~~~~~~y~aPE~~~~--~~~~~~~DvwslGvil 533 (654)
+ |+||||||+||+++.++ .+||+|||++..... .....++..|+|||++.+ ..++.++|||||||++
T Consensus 188 ~-ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il 266 (345)
T 3hko_A 188 G-ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLL 266 (345)
T ss_dssp T-EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHH
T ss_pred C-ccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHH
Confidence 8 99999999999998776 899999999975432 123456788999999865 6789999999999999
Q ss_pred HHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 036334 534 LELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRM 612 (654)
Q Consensus 534 ~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 612 (654)
|||++|+.||..... ...+..+......... + . .......+.+++.+||+.||++|||+.|+++.
T Consensus 267 ~el~~g~~pf~~~~~------~~~~~~~~~~~~~~~~--~---~---~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~h 331 (345)
T 3hko_A 267 HLLLMGAVPFPGVND------ADTISQVLNKKLCFEN--P---N---YNVLSPLARDLLSNLLNRNVDERFDAMRALQH 331 (345)
T ss_dssp HHHHHSSCSSCCSSH------HHHHHHHHHCCCCTTS--G---G---GGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHS
T ss_pred HHHHHCCCCCCCCCh------HHHHHHHHhcccccCC--c---c---cccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 999999999975322 1222222222111100 0 0 01122356778889999999999999999873
No 161
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=5.2e-39 Score=336.36 Aligned_cols=239 Identities=22% Similarity=0.333 Sum_probs=195.6
Q ss_pred hhccccccCceeEEEEEec-CCcEEEEEEecccc----cCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecC
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVA----VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMP 424 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~ 424 (654)
+.+.||+|+||.||++... +++.||+|++.... ...+.+.+|+.++++++||||+++++++.+.+..++||||++
T Consensus 45 ~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 124 (335)
T 2owb_A 45 RGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCR 124 (335)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEecCC
Confidence 3578999999999999965 47899999987543 234568889999999999999999999999999999999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC----
Q 036334 425 AGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT---- 500 (654)
Q Consensus 425 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~---- 500 (654)
+++|.+++.. ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++......
T Consensus 125 ~~~L~~~~~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 198 (335)
T 2owb_A 125 RRSLLELHKR-----RKALTEPEARYYLRQIVLGCQYLHRNR-VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK 198 (335)
T ss_dssp TCBHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCCTTCEECCSTTCCB
T ss_pred CCCHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-CEecCCCchhEEEcCCCCEEEeeccCceecccCcccc
Confidence 9999999873 245899999999999999999999998 999999999999999999999999998765422
Q ss_pred CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccCC
Q 036334 501 TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHN 580 (654)
Q Consensus 501 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 580 (654)
....++..|+|||++.+..++.++||||||+++|||++|+.||.... .......+..... ..
T Consensus 199 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~~~~~~~~~~~~------------~~ 260 (335)
T 2owb_A 199 KVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC------LKETYLRIKKNEY------------SI 260 (335)
T ss_dssp CCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHHTCC------------CC
T ss_pred cccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCC------HHHHHHHHhcCCC------------CC
Confidence 23456778999999998899999999999999999999999996532 1111111111110 00
Q ss_pred hHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 036334 581 IEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRM 612 (654)
Q Consensus 581 ~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 612 (654)
.......+.+++.+||+.||++|||++|+++.
T Consensus 261 ~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 261 PKHINPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred CccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 11112356778889999999999999999874
No 162
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=5.8e-40 Score=343.15 Aligned_cols=253 Identities=23% Similarity=0.360 Sum_probs=200.7
Q ss_pred hhccccccCceeEEEEEecC------CcEEEEEEeccccc--CHHHHHHHHHHHhcc-CCCccccccEEEEeCCceEEEE
Q 036334 350 SAEVLGKGSVGTSYKAVLEE------GTTVVVKRLKEVAV--GKREFEMQMEVLGKI-KHDNVVPLRAFYYSKDEKLLVY 420 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~~------g~~vavK~~~~~~~--~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~~~~lv~ 420 (654)
+.+.||+|+||.||+|.... +..||+|+++.... ..+.+.+|+.+++++ +||||+++++++.+.+..++||
T Consensus 50 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 129 (333)
T 2i1m_A 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVIT 129 (333)
T ss_dssp EEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred eeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEEEE
Confidence 35789999999999998642 24799999976532 346688999999999 8999999999999999999999
Q ss_pred EecCCCchhhhhccCCC---------CCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEecc
Q 036334 421 DYMPAGSLSALLHGSRG---------SGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDF 491 (654)
Q Consensus 421 e~~~~g~L~~~l~~~~~---------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Df 491 (654)
||+++|+|.+++..... .....+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+||
T Consensus 130 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~Df 208 (333)
T 2i1m_A 130 EYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN-CIHRDVAARNVLLTNGHVAKIGDF 208 (333)
T ss_dssp ECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGCEEEGGGEEEBCCC
T ss_pred ecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC-cccCCcccceEEECCCCeEEECcc
Confidence 99999999999864310 01245899999999999999999999998 999999999999999999999999
Q ss_pred CCCCCcCCCC------CCCccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhh
Q 036334 492 GLNPLFGNTT------PPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVRE 564 (654)
Q Consensus 492 gla~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~ 564 (654)
|++....... ...++..|+|||++.+..++.++|||||||++|||++ |..||...... ..+......
T Consensus 209 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~------~~~~~~~~~ 282 (333)
T 2i1m_A 209 GLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVN------SKFYKLVKD 282 (333)
T ss_dssp GGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSS------HHHHHHHHH
T ss_pred ccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchh------HHHHHHHhc
Confidence 9998653321 2334567999999988899999999999999999999 89998753321 111222221
Q ss_pred chhhhhhhHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcC
Q 036334 565 EWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRG 619 (654)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 619 (654)
.... .........+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 283 ~~~~----------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 327 (333)
T 2i1m_A 283 GYQM----------AQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE 327 (333)
T ss_dssp TCCC----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCC----------CCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHh
Confidence 1110 00111224577888899999999999999999999988643
No 163
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=1.6e-39 Score=353.77 Aligned_cols=239 Identities=21% Similarity=0.256 Sum_probs=188.3
Q ss_pred HhhccccccCceeEEEEEec-CCcEEEEEEecccc----cCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEec
Q 036334 349 ASAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVA----VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYM 423 (654)
Q Consensus 349 ~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 423 (654)
.+.++||+|+||.||+|... +|+.||||+++... .....+.+|+.++++++||||++++++|.+.+..++||||+
T Consensus 151 ~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~ 230 (446)
T 4ejn_A 151 EYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYA 230 (446)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEECCC
T ss_pred EEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEeeC
Confidence 34578999999999999954 58999999997542 22345678999999999999999999999999999999999
Q ss_pred CCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhc-cCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC--
Q 036334 424 PAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV-SGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT-- 500 (654)
Q Consensus 424 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~-~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~-- 500 (654)
++|+|.+++... ..+++..+..++.|++.||+|||+ .+ |+||||||+|||++.++.+||+|||++......
T Consensus 231 ~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~g-iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 304 (446)
T 4ejn_A 231 NGGELFFHLSRE-----RVFSEDRARFYGAEIVSALDYLHSEKN-VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA 304 (446)
T ss_dssp SSCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHHTC-CCCCCCCGGGEEECSSSCEEECCCCCCCTTCC---
T ss_pred CCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHhhcCC-EEECCCCHHHEEECCCCCEEEccCCCceeccCCCc
Confidence 999999999742 458999999999999999999997 77 999999999999999999999999999764322
Q ss_pred --CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhcc
Q 036334 501 --TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRY 578 (654)
Q Consensus 501 --~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 578 (654)
....+|+.|+|||++.+..++.++|||||||++|||++|+.||.... .......+......
T Consensus 305 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~------~~~~~~~i~~~~~~----------- 367 (446)
T 4ejn_A 305 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD------HEKLFELILMEEIR----------- 367 (446)
T ss_dssp --CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHCCCC-----------
T ss_pred ccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCC------HHHHHHHHHhCCCC-----------
Confidence 34567888999999999999999999999999999999999996532 12222222211110
Q ss_pred CChHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 036334 579 HNIEEEMVQLLQIAMGCVSTVPDQRP-----AMQEVVR 611 (654)
Q Consensus 579 ~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~ 611 (654)
.......++.+++.+||+.||++|| +++|+++
T Consensus 368 -~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 368 -FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp -CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred -CCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 0111223567788899999999999 9999876
No 164
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=1.3e-39 Score=344.87 Aligned_cols=240 Identities=25% Similarity=0.273 Sum_probs=186.2
Q ss_pred hhccccccCceeEEEEEec-CCcEEEEEEecccccC----HHHHHHHHHH-HhccCCCccccccEEEEeCCceEEEEEec
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAVG----KREFEMQMEV-LGKIKHDNVVPLRAFYYSKDEKLLVYDYM 423 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~----~~~~~~e~~~-l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 423 (654)
+.++||+|+||+||+|... +++.||+|++++.... ...+.+|..+ ++.++||||+++++++.+.+..|+||||+
T Consensus 42 ~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~E~~ 121 (373)
T 2r5t_A 42 FLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYI 121 (373)
T ss_dssp EEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred EEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEEeCC
Confidence 3578999999999999965 4789999999765322 2345556665 57789999999999999999999999999
Q ss_pred CCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCC----
Q 036334 424 PAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN---- 499 (654)
Q Consensus 424 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~---- 499 (654)
++|+|.+++... ..+++..++.++.||+.||+|||+++ |+||||||+|||++.++++||+|||++.....
T Consensus 122 ~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~~~ 195 (373)
T 2r5t_A 122 NGGELFYHLQRE-----RCFLEPRARFYAAEIASALGYLHSLN-IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNST 195 (373)
T ss_dssp CSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCCCC
T ss_pred CCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCHHHEEECCCCCEEEeeCccccccccCCCc
Confidence 999999999742 35899999999999999999999998 99999999999999999999999999976322
Q ss_pred CCCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccC
Q 036334 500 TTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYH 579 (654)
Q Consensus 500 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 579 (654)
.....+|+.|+|||++.+..++.++|||||||++|||++|+.||.... .......+..... ....
T Consensus 196 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~------~~~~~~~i~~~~~---------~~~~ 260 (373)
T 2r5t_A 196 TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN------TAEMYDNILNKPL---------QLKP 260 (373)
T ss_dssp CCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSB------HHHHHHHHHHSCC---------CCCS
T ss_pred cccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC------HHHHHHHHHhccc---------CCCC
Confidence 233467888999999999999999999999999999999999997532 1222222222111 0111
Q ss_pred ChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 036334 580 NIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMI 613 (654)
Q Consensus 580 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 613 (654)
.. ...+.+++.+||+.||++||++.+.++++
T Consensus 261 ~~---~~~~~~li~~lL~~dp~~R~~~~~~~~~i 291 (373)
T 2r5t_A 261 NI---TNSARHLLEGLLQKDRTKRLGAKDDFMEI 291 (373)
T ss_dssp SS---CHHHHHHHHHHTCSSGGGSTTTTTTHHHH
T ss_pred CC---CHHHHHHHHHHcccCHHhCCCCCCCHHHH
Confidence 12 23466777899999999999986444333
No 165
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.5e-39 Score=337.43 Aligned_cols=254 Identities=24% Similarity=0.425 Sum_probs=198.5
Q ss_pred hhccccccCceeEEEEEe-----cCCcEEEEEEecccc-cCHHHHHHHHHHHhccCCCccccccEEEEeCC--ceEEEEE
Q 036334 350 SAEVLGKGSVGTSYKAVL-----EEGTTVVVKRLKEVA-VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKD--EKLLVYD 421 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~-----~~g~~vavK~~~~~~-~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~--~~~lv~e 421 (654)
+.+.||+|+||.||++.. .+|+.||||++.... ...+.+.+|++++++++||||+++++++...+ ..++|||
T Consensus 45 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 124 (326)
T 2w1i_A 45 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIME 124 (326)
T ss_dssp EEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEEEC
T ss_pred eeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEEEE
Confidence 457899999999999983 358899999997643 23467899999999999999999999987654 6899999
Q ss_pred ecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCCC
Q 036334 422 YMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTT 501 (654)
Q Consensus 422 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 501 (654)
|+++++|.+++... ...+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 125 ~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~ 199 (326)
T 2w1i_A 125 YLPYGSLRDYLQKH----KERIDHIKLLQYTSQICKGMEYLGTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 199 (326)
T ss_dssp CCTTCBHHHHHHHS----TTSSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEEEETTEEEECCCTTCEECCSSC
T ss_pred CCCCCCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHhCC-EeccCCCcceEEEcCCCcEEEecCcchhhccccc
Confidence 99999999999753 235899999999999999999999998 9999999999999999999999999998764332
Q ss_pred -------CCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCC-------CCCC-C-hhHHHHHHhhhc
Q 036334 502 -------PPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLG-------EEGI-D-LPRWVQSVVREE 565 (654)
Q Consensus 502 -------~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~-------~~~~-~-~~~~~~~~~~~~ 565 (654)
...++..|+|||++.+..++.++||||||+++|||++|..||..... .... . ....+...+...
T Consensus 200 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (326)
T 2w1i_A 200 EYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 279 (326)
T ss_dssp SEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTT
T ss_pred cccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcC
Confidence 23345569999999888899999999999999999999998764210 0000 0 000000011000
Q ss_pred hhhhhhhHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhc
Q 036334 566 WTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNR 618 (654)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 618 (654)
. ..........++.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 280 ~----------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~ 322 (326)
T 2w1i_A 280 G----------RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 322 (326)
T ss_dssp C----------CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred C----------CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 0 011112233467788889999999999999999999999874
No 166
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=1.8e-40 Score=353.25 Aligned_cols=236 Identities=18% Similarity=0.273 Sum_probs=182.3
Q ss_pred hccccccCceeEEEEEe-cCCcEEEEEEeccc----ccCHHHHHHHH---HHHhccCCCcccccc-------EEEEeCCc
Q 036334 351 AEVLGKGSVGTSYKAVL-EEGTTVVVKRLKEV----AVGKREFEMQM---EVLGKIKHDNVVPLR-------AFYYSKDE 415 (654)
Q Consensus 351 ~~~lg~G~fg~Vy~~~~-~~g~~vavK~~~~~----~~~~~~~~~e~---~~l~~l~hpniv~l~-------~~~~~~~~ 415 (654)
.+.||+|+||+||+|.. .+|+.||||++... ....+.+.+|+ +.+++++||||++++ +++.+++.
T Consensus 78 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 157 (377)
T 3byv_A 78 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQK 157 (377)
T ss_dssp EEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTS
T ss_pred cceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCC
Confidence 57899999999999995 46899999999743 22346788999 455666899999998 66665532
Q ss_pred -----------------eEEEEEecCCCchhhhhccCCCC--CCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCC
Q 036334 416 -----------------KLLVYDYMPAGSLSALLHGSRGS--GRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKAS 476 (654)
Q Consensus 416 -----------------~~lv~e~~~~g~L~~~l~~~~~~--~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~ 476 (654)
.++||||+ +|+|.+++...... ....+++..++.++.||+.||+|||+++ |+||||||+
T Consensus 158 ~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivHrDikp~ 235 (377)
T 3byv_A 158 KKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG-LVHTYLRPV 235 (377)
T ss_dssp CSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGG
T ss_pred ccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHH
Confidence 78999999 68999999743211 1123556889999999999999999998 999999999
Q ss_pred cEEECCCCCeEEeccCCCCCcCCC-CCCCccccccCccccCCC-----------CCCcchhHHHHHHHHHHHHhCCCCCC
Q 036334 477 NILLRPDHDACVSDFGLNPLFGNT-TPPTRVAGYRAPEVVETR-----------KVTFKSDVYSFGVLLLELLTGKAPNQ 544 (654)
Q Consensus 477 NIll~~~~~~kl~Dfgla~~~~~~-~~~~~~~~y~aPE~~~~~-----------~~~~~~DvwslGvil~el~tg~~pf~ 544 (654)
|||++.++.+||+|||++...... ....+ ..|+|||++.+. .++.++|||||||++|||++|+.||.
T Consensus 236 NIll~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~ 314 (377)
T 3byv_A 236 DIVLDQRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPIT 314 (377)
T ss_dssp GEEECTTCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC-
T ss_pred HEEEcCCCCEEEEechhheecCCcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCCCc
Confidence 999999999999999999865543 23345 789999999877 89999999999999999999999997
Q ss_pred CCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 036334 545 ASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVR 611 (654)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 611 (654)
.......... +.. ..... ..++.+++.+||+.||++|||+.|+++
T Consensus 315 ~~~~~~~~~~---------------~~~----~~~~~---~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 315 KDAALGGSEW---------------IFR----SCKNI---PQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp -----CCSGG---------------GGS----SCCCC---CHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred ccccccchhh---------------hhh----hccCC---CHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 6433221100 000 00111 235677888999999999999999986
No 167
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=4.4e-39 Score=335.76 Aligned_cols=243 Identities=21% Similarity=0.306 Sum_probs=193.6
Q ss_pred ccccccCceeEEEEEec-CCcEEEEEEecccc---cCHHHHHHHHHHHhccC-CCccccccEEEEeCCceEEEEEecCCC
Q 036334 352 EVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVA---VGKREFEMQMEVLGKIK-HDNVVPLRAFYYSKDEKLLVYDYMPAG 426 (654)
Q Consensus 352 ~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~e~~~l~~l~-hpniv~l~~~~~~~~~~~lv~e~~~~g 426 (654)
+.||+|+||.||+|... +|+.||+|+++... ....++.+|+.+++++. ||||+++++++.+.+..++||||+++|
T Consensus 35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~~ 114 (327)
T 3lm5_A 35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGG 114 (327)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTTE
T ss_pred ceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCCC
Confidence 78999999999999865 58999999997653 33567889999999985 699999999999999999999999999
Q ss_pred chhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECC---CCCeEEeccCCCCCcCCC---
Q 036334 427 SLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRP---DHDACVSDFGLNPLFGNT--- 500 (654)
Q Consensus 427 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~---~~~~kl~Dfgla~~~~~~--- 500 (654)
+|.+++... ....+++..++.++.|++.||+|||+++ |+||||||+||+++. ++.+||+|||++......
T Consensus 115 ~L~~~~~~~---~~~~~~~~~~~~i~~ql~~~L~~LH~~g-ivH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~ 190 (327)
T 3lm5_A 115 EIFSLCLPE---LAEMVSENDVIRLIKQILEGVYYLHQNN-IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACEL 190 (327)
T ss_dssp EGGGGGSSC---C-CCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEESCBTTBCCEEECCGGGCEEC------
T ss_pred cHHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHHCC-eecCcCChHHEEEecCCCCCcEEEeeCccccccCCcccc
Confidence 999998643 2356999999999999999999999998 999999999999998 789999999999876543
Q ss_pred CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccCC
Q 036334 501 TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHN 580 (654)
Q Consensus 501 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 580 (654)
....+++.|+|||++.+..++.++|||||||++|||++|+.||..... ......+..... +.. ...
T Consensus 191 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~~~~~i~~~~~-----~~~---~~~ 256 (327)
T 3lm5_A 191 REIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDN------QETYLNISQVNV-----DYS---EET 256 (327)
T ss_dssp ---CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHTCC-----CCC---TTT
T ss_pred ccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc------hHHHHHHHhccc-----ccC---chh
Confidence 234578889999999999999999999999999999999999975322 111111111100 000 000
Q ss_pred hHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 036334 581 IEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRM 612 (654)
Q Consensus 581 ~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 612 (654)
.......+.+++.+||+.||++|||++|+++.
T Consensus 257 ~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 257 FSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp TTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred hcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 11223456778889999999999999999864
No 168
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=1.1e-38 Score=343.83 Aligned_cols=243 Identities=22% Similarity=0.324 Sum_probs=185.3
Q ss_pred HhhccccccCceeEEEEEec-CCcEEEEEEeccccc---------CHHHHHHHHHHHhccCCCccccccEEEEeCCceEE
Q 036334 349 ASAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAV---------GKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLL 418 (654)
Q Consensus 349 ~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~---------~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~l 418 (654)
.+.+.||+|+||+||+|... +++.||||++..... ....+.+|++++++++||||+++++++. .+..++
T Consensus 138 ~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~~~~~l 216 (419)
T 3i6u_A 138 IMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AEDYYI 216 (419)
T ss_dssp EEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-SSEEEE
T ss_pred EEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCceEE
Confidence 34678999999999999865 578999999875421 1224789999999999999999999975 456899
Q ss_pred EEEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCC---CeEEeccCCCC
Q 036334 419 VYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDH---DACVSDFGLNP 495 (654)
Q Consensus 419 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~---~~kl~Dfgla~ 495 (654)
||||+++|+|.+++.. ...+++..++.++.|++.||+|||+++ |+||||||+|||++.++ .+||+|||++.
T Consensus 217 v~e~~~~g~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~ 290 (419)
T 3i6u_A 217 VLELMEGGELFDKVVG-----NKRLKEATCKLYFYQMLLAVQYLHENG-IIHRDLKPENVLLSSQEEDCLIKITDFGHSK 290 (419)
T ss_dssp EEECCTTCBGGGGTSS-----SCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESSSSSSCCEEECCSSTTT
T ss_pred EEEcCCCCcHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChHhEEEecCCCcceEEEeecccce
Confidence 9999999999999873 346999999999999999999999998 99999999999997654 59999999998
Q ss_pred CcCCCC---CCCccccccCccccCC---CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhh
Q 036334 496 LFGNTT---PPTRVAGYRAPEVVET---RKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAE 569 (654)
Q Consensus 496 ~~~~~~---~~~~~~~y~aPE~~~~---~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 569 (654)
...... ...++..|+|||++.+ ..++.++|||||||++|||++|+.||....... .+...+ .......
T Consensus 291 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~--~~~~~i----~~~~~~~ 364 (419)
T 3i6u_A 291 ILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV--SLKDQI----TSGKYNF 364 (419)
T ss_dssp SCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC--CHHHHH----HTTCCCC
T ss_pred ecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH--HHHHHH----hcCCCCC
Confidence 775432 3456788999999853 678899999999999999999999997543222 111111 1110000
Q ss_pred hhhHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 036334 570 VFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVR 611 (654)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 611 (654)
.+. .. ......+.+++.+||+.||++|||++|+++
T Consensus 365 --~~~--~~---~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 365 --IPE--VW---AEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp --CHH--HH---TTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred --Cch--hh---cccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 000 00 011235677888999999999999999986
No 169
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=6.8e-39 Score=349.59 Aligned_cols=248 Identities=22% Similarity=0.327 Sum_probs=186.2
Q ss_pred hhccccccCceeEEEEEec-CCcEEEEEEecccc---cCHHHHHHHHHHHhccCCCccccccEEEEeCC------ceEEE
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVA---VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKD------EKLLV 419 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~------~~~lv 419 (654)
+.+.||+|+||+||+|... +|+.||||++.... ...+++.+|+.+++.++||||+++++++...+ ..|+|
T Consensus 66 ~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv 145 (464)
T 3ttj_A 66 NLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLV 145 (464)
T ss_dssp EEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEE
T ss_pred EEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEEEE
Confidence 4578999999999999854 58899999997643 23456789999999999999999999997553 46999
Q ss_pred EEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCC
Q 036334 420 YDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN 499 (654)
Q Consensus 420 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~ 499 (654)
|||+++ +|.+.+.. .+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++.....
T Consensus 146 ~E~~~~-~l~~~~~~-------~l~~~~~~~~~~qil~aL~~lH~~~-iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 216 (464)
T 3ttj_A 146 MELMDA-NLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 216 (464)
T ss_dssp EECCSE-EHHHHHTS-------CCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCCCC-----
T ss_pred EeCCCC-CHHHHHhh-------cCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChHhEEEeCCCCEEEEEEEeeeecCC
Confidence 999976 56666642 3899999999999999999999998 99999999999999999999999999987654
Q ss_pred C---CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhh------chhh--
Q 036334 500 T---TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVRE------EWTA-- 568 (654)
Q Consensus 500 ~---~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~------~~~~-- 568 (654)
. ....+|..|+|||++.+..|+.++||||+||++|||++|+.||.+.... ..+..+... ....
T Consensus 217 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~------~~~~~i~~~lg~p~~~~~~~~ 290 (464)
T 3ttj_A 217 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI------DQWNKVIEQLGTPCPEFMKKL 290 (464)
T ss_dssp CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHHHCSCCHHHHTTS
T ss_pred CcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHHhcCCCCHHHHHHc
Confidence 3 3346788899999999999999999999999999999999999764321 111111110 0000
Q ss_pred --------------------hhhhHhhhccCC--hHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 036334 569 --------------------EVFDVELMRYHN--IEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRM 612 (654)
Q Consensus 569 --------------------~~~~~~~~~~~~--~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 612 (654)
..+...+..... ......++.+|+.+||..||++|||++|+++.
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 291 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp CHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred chhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000000000000 01124567888999999999999999999763
No 170
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.1e-38 Score=340.74 Aligned_cols=189 Identities=30% Similarity=0.460 Sum_probs=154.6
Q ss_pred hhccccccCceeEEEEEec-CCcEEEEEEecccc---cCHHHHHHHHHHHhccC-CCccccccEEEEeCC--ceEEEEEe
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVA---VGKREFEMQMEVLGKIK-HDNVVPLRAFYYSKD--EKLLVYDY 422 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~e~~~l~~l~-hpniv~l~~~~~~~~--~~~lv~e~ 422 (654)
+.+.||+|+||.||+|... +|+.||||++.... ....++.+|+.+++++. ||||+++++++...+ ..|+||||
T Consensus 13 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~ 92 (388)
T 3oz6_A 13 LVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDY 92 (388)
T ss_dssp EEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEEC
T ss_pred EEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEecc
Confidence 4578999999999999854 68999999986542 23456778999999997 999999999997654 68999999
Q ss_pred cCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC--
Q 036334 423 MPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT-- 500 (654)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~-- 500 (654)
++ |+|.+++.. ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 93 ~~-~~L~~~~~~------~~~~~~~~~~i~~qi~~~L~~LH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 164 (388)
T 3oz6_A 93 ME-TDLHAVIRA------NILEPVHKQYVVYQLIKVIKYLHSGG-LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRR 164 (388)
T ss_dssp CS-EEHHHHHHH------TCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEESSSCCC
T ss_pred cC-cCHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhCC-EEeCCCCHHHeEEcCCCCEEecCCccccccccccc
Confidence 97 699999873 35899999999999999999999998 999999999999999999999999999754321
Q ss_pred -----------------------CCCCccccccCccccCC-CCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 036334 501 -----------------------TPPTRVAGYRAPEVVET-RKVTFKSDVYSFGVLLLELLTGKAPNQAS 546 (654)
Q Consensus 501 -----------------------~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~tg~~pf~~~ 546 (654)
....+|..|+|||++.+ ..++.++||||+||++|||++|+.||...
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 234 (388)
T 3oz6_A 165 VTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGS 234 (388)
T ss_dssp CCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCC
Confidence 12356778999999876 67899999999999999999999999764
No 171
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.3e-39 Score=340.21 Aligned_cols=255 Identities=16% Similarity=0.188 Sum_probs=197.0
Q ss_pred hhccccccCceeEEEEEecC---------CcEEEEEEecccccCHHHHHHHHHHHhccCCCcccc---------------
Q 036334 350 SAEVLGKGSVGTSYKAVLEE---------GTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVP--------------- 405 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~~---------g~~vavK~~~~~~~~~~~~~~e~~~l~~l~hpniv~--------------- 405 (654)
+.+.||+|+||.||+|.... ++.||||++... +.+.+|++++++++||||++
T Consensus 46 ~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~ 121 (352)
T 2jii_A 46 LKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPT 121 (352)
T ss_dssp EEEEEEEETTEEEEEEEECC-----------CEEEEEEETT----STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCCC
T ss_pred EEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc----chHHHHHHHHHHhcccchhhhhhhhccCCccCccc
Confidence 35789999999999999763 789999998754 46888999999999999998
Q ss_pred ccEEEEe-CCceEEEEEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCC
Q 036334 406 LRAFYYS-KDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDH 484 (654)
Q Consensus 406 l~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~ 484 (654)
+++++.. ++..++||||+ +++|.+++.... ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++
T Consensus 122 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dikp~NIl~~~~~ 196 (352)
T 2jii_A 122 CMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP---KHVLSERSVLQVACRLLDALEFLHENE-YVHGNVTAENIFVDPED 196 (352)
T ss_dssp CCEEEEETTTEEEEEEECC-CEEHHHHHHHSG---GGCCCHHHHHHHHHHHHHHHHHHHHTT-CBCSCCCGGGEEEETTE
T ss_pred hhhccccCCcEEEEEecCC-CcCHHHHHHhCC---cCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCCHHHEEEcCCC
Confidence 6777776 67789999999 999999998531 246999999999999999999999998 99999999999999998
Q ss_pred --CeEEeccCCCCCcCCC-----------CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCC
Q 036334 485 --DACVSDFGLNPLFGNT-----------TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEG 551 (654)
Q Consensus 485 --~~kl~Dfgla~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~ 551 (654)
.+||+|||++...... ....++..|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 197 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~- 275 (352)
T 2jii_A 197 QSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNT- 275 (352)
T ss_dssp EEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH-
T ss_pred CceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCH-
Confidence 8999999999765422 22356778999999999999999999999999999999999997643211
Q ss_pred CChhHHHHHHhhhchhhhhhhHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCC
Q 036334 552 IDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGE 620 (654)
Q Consensus 552 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 620 (654)
..+....... ... .....+.. ... .....++.+++.+||+.||++|||++++++.|+++....
T Consensus 276 ~~~~~~~~~~-~~~-~~~~~~~~-~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~ 338 (352)
T 2jii_A 276 EDIMKQKQKF-VDK-PGPFVGPC-GHW---IRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDL 338 (352)
T ss_dssp HHHHHHHHHH-HHS-CCCEECTT-SCE---ECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhc-cCC-hhhhhhhc-ccc---CCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhc
Confidence 0011111100 000 00000000 000 011245777888999999999999999999999997654
No 172
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=2.5e-39 Score=349.94 Aligned_cols=192 Identities=24% Similarity=0.317 Sum_probs=168.4
Q ss_pred hhccccccCceeEEEEEec-CCcEEEEEEecccccCHHHHHHHHHHHhcc------CCCccccccEEEEeCCceEEEEEe
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAVGKREFEMQMEVLGKI------KHDNVVPLRAFYYSKDEKLLVYDY 422 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~e~~~l~~l------~hpniv~l~~~~~~~~~~~lv~e~ 422 (654)
+.++||+|+||+||+|... +++.||||+++......+++.+|+.+++.+ .|+||+++++++...+..++||||
T Consensus 101 ~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~ 180 (429)
T 3kvw_A 101 VLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFEL 180 (429)
T ss_dssp EEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEEECC
T ss_pred EEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEEEec
Confidence 4578999999999999865 488999999987655566778888888776 577999999999999999999999
Q ss_pred cCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCC--eEEeccCCCCCcCCC
Q 036334 423 MPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHD--ACVSDFGLNPLFGNT 500 (654)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~--~kl~Dfgla~~~~~~ 500 (654)
+. ++|.+++.... ...+++..++.++.||+.||+|||+++ |+||||||+|||++.++. +||+|||++......
T Consensus 181 ~~-~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~~ 255 (429)
T 3kvw_A 181 LS-MNLYELIKKNK---FQGFSLPLVRKFAHSILQCLDALHKNR-IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQR 255 (429)
T ss_dssp CC-CBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHHHT-EECSCCSGGGEEESSTTSCCEEECCCTTCEETTCC
T ss_pred cC-CCHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEEccCCCcceEEeecccceecCCc
Confidence 95 69999987542 345899999999999999999999998 999999999999999987 999999999766543
Q ss_pred -CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 036334 501 -TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQAS 546 (654)
Q Consensus 501 -~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~ 546 (654)
....++..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 256 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 256 VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 3456788899999999999999999999999999999999999764
No 173
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=5.6e-39 Score=327.94 Aligned_cols=241 Identities=18% Similarity=0.244 Sum_probs=193.7
Q ss_pred HhhccccccCceeEEEEEec-CCcEEEEEEecccc---cCHHHHHHHHHHHhcc-CCCccccccEEEEeCCceEEEEEec
Q 036334 349 ASAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVA---VGKREFEMQMEVLGKI-KHDNVVPLRAFYYSKDEKLLVYDYM 423 (654)
Q Consensus 349 ~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e~~ 423 (654)
...+.||+|+||.||+|... +++.||+|+++... ....++.+|+..+.++ +||||+++++++.+++..++||||+
T Consensus 14 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e~~ 93 (289)
T 1x8b_A 14 HELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYC 93 (289)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEEec
Confidence 44678999999999999975 68999999997542 2345678899999888 8999999999999999999999999
Q ss_pred CCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCC-------------------C
Q 036334 424 PAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPD-------------------H 484 (654)
Q Consensus 424 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~-------------------~ 484 (654)
++|+|.+++..... ....+++..++.++.|++.||+|||+++ |+||||||+||+++.+ .
T Consensus 94 ~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~ 171 (289)
T 1x8b_A 94 NGGSLADAISENYR-IMSYFKEAELKDLLLQVGRGLRYIHSMS-LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKV 171 (289)
T ss_dssp TTCBHHHHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEC--------------------CC
T ss_pred CCCcHHHHHHhhcc-cccCCCHHHHHHHHHHHHHHHHHHHhCC-EeecCCCHHHEEEcCCCCCcccccccccccccCCce
Confidence 99999999974321 1245899999999999999999999998 9999999999999844 4
Q ss_pred CeEEeccCCCCCcCCCCCCCccccccCccccCCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhh
Q 036334 485 DACVSDFGLNPLFGNTTPPTRVAGYRAPEVVETR-KVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVR 563 (654)
Q Consensus 485 ~~kl~Dfgla~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 563 (654)
.+||+|||++..........++..|+|||++.+. .++.++|||||||++|||++|.+++.... .......
T Consensus 172 ~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~---------~~~~~~~ 242 (289)
T 1x8b_A 172 MFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD---------QWHEIRQ 242 (289)
T ss_dssp CEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH---------HHHHHHT
T ss_pred EEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh---------HHHHHHc
Confidence 7999999999888777677788999999999765 56789999999999999999988764321 0111111
Q ss_pred hchhhhhhhHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 036334 564 EEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVR 611 (654)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 611 (654)
..... ........+.+++.+||+.||++|||+.|+++
T Consensus 243 -~~~~~----------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 243 -GRLPR----------IPQVLSQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp -TCCCC----------CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -CCCCC----------CCcccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 11000 01112235677888999999999999999976
No 174
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.2e-39 Score=347.20 Aligned_cols=243 Identities=19% Similarity=0.203 Sum_probs=192.2
Q ss_pred hccccccCceeEEEEEec-CCcEEEEEEecccc----cCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCC
Q 036334 351 AEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVA----VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPA 425 (654)
Q Consensus 351 ~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~ 425 (654)
.++||+|+||+||++... +|+.||+|++++.. .....+.+|..++.+++||||++++++|.+.+..|+||||+++
T Consensus 66 ~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE~~~g 145 (412)
T 2vd5_A 66 LKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVG 145 (412)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEcCCCC
Confidence 578999999999999975 68999999997532 1234578899999999999999999999999999999999999
Q ss_pred CchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC-----
Q 036334 426 GSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT----- 500 (654)
Q Consensus 426 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~----- 500 (654)
|+|.+++... ...+++..++.++.||+.||+|||+++ |+||||||+|||++.++++||+|||++......
T Consensus 146 g~L~~~l~~~----~~~l~~~~~~~~~~qi~~aL~~LH~~g-iiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~~~~ 220 (412)
T 2vd5_A 146 GDLLTLLSKF----GERIPAEMARFYLAEIVMAIDSVHRLG-YVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRS 220 (412)
T ss_dssp CBHHHHHHHH----SSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEEC
T ss_pred CcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecccCHHHeeecCCCCEEEeechhheeccCCCcccc
Confidence 9999999743 235899999999999999999999998 999999999999999999999999999766433
Q ss_pred CCCCccccccCccccC-------CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhH
Q 036334 501 TPPTRVAGYRAPEVVE-------TRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDV 573 (654)
Q Consensus 501 ~~~~~~~~y~aPE~~~-------~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 573 (654)
....+|+.|+|||++. ...++.++|||||||++|||++|+.||..... ......+......
T Consensus 221 ~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~------~~~~~~i~~~~~~------ 288 (412)
T 2vd5_A 221 LVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADST------AETYGKIVHYKEH------ 288 (412)
T ss_dssp SSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHTHHHH------
T ss_pred ceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCH------HHHHHHHHhcccC------
Confidence 2346788999999986 35789999999999999999999999975321 1222222211100
Q ss_pred hhhccCChHHHHHHHHHHHhhccCCCCCCC---CCHHHHHHH
Q 036334 574 ELMRYHNIEEEMVQLLQIAMGCVSTVPDQR---PAMQEVVRM 612 (654)
Q Consensus 574 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R---Ps~~evl~~ 612 (654)
............++.+++.+||. +|++| |+++|+++.
T Consensus 289 -~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 289 -LSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp -CCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred -cCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 00000001122356677779999 99998 588888653
No 175
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.3e-38 Score=350.42 Aligned_cols=244 Identities=24% Similarity=0.305 Sum_probs=196.6
Q ss_pred HHhhccccccCceeEEEEEec-CCcEEEEEEeccc---ccCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEec
Q 036334 348 RASAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEV---AVGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYM 423 (654)
Q Consensus 348 ~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 423 (654)
|.+.++||+|+||+||+|... +|+.||||++... ......+.+|++++++++||||+++++++.+....++||||+
T Consensus 24 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 103 (486)
T 3mwu_A 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELY 103 (486)
T ss_dssp EEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred eEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEEcC
Confidence 345688999999999999965 6899999999654 334677899999999999999999999999999999999999
Q ss_pred CCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEEC---CCCCeEEeccCCCCCcCCC
Q 036334 424 PAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLR---PDHDACVSDFGLNPLFGNT 500 (654)
Q Consensus 424 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~---~~~~~kl~Dfgla~~~~~~ 500 (654)
++|+|.+.+... ..+++..++.++.|++.||+|||+++ |+||||||+|||++ .++.+||+|||++......
T Consensus 104 ~~~~L~~~~~~~-----~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 177 (486)
T 3mwu_A 104 TGGELFDEIIKR-----KRFSEHDAARIIKQVFSGITYMHKHN-IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177 (486)
T ss_dssp CSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC
T ss_pred CCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCchHHEEEecCCCCCCEEEEECCcCeECCCC
Confidence 999999988642 45899999999999999999999998 99999999999995 4567999999999876543
Q ss_pred ---CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhc
Q 036334 501 ---TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMR 577 (654)
Q Consensus 501 ---~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 577 (654)
....+++.|+|||++.+ .++.++||||+||++|+|++|+.||..... ...+..+........ ...
T Consensus 178 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~~~~~i~~~~~~~~-----~~~ 245 (486)
T 3mwu_A 178 TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE------YDILKRVETGKYAFD-----LPQ 245 (486)
T ss_dssp ----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHTCCCSC-----SGG
T ss_pred CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHhCCCCCC-----Ccc
Confidence 23467888999999875 599999999999999999999999975321 222222222211110 001
Q ss_pred cCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 036334 578 YHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRM 612 (654)
Q Consensus 578 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 612 (654)
+. ....++.+++.+||+.||++|||+.|+++.
T Consensus 246 ~~---~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 246 WR---TISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp GG---GSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred cC---CCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 11 112356678889999999999999999875
No 176
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=5.9e-39 Score=334.74 Aligned_cols=252 Identities=23% Similarity=0.333 Sum_probs=196.8
Q ss_pred hhccccccCceeEEEEEe------cCCcEEEEEEecccc--cCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEE
Q 036334 350 SAEVLGKGSVGTSYKAVL------EEGTTVVVKRLKEVA--VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYD 421 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~------~~g~~vavK~~~~~~--~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 421 (654)
+.+.||+|+||.||+|.+ .++..||||++.... ....++.+|+.++++++||||+++++++.+.+..++|||
T Consensus 34 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 113 (327)
T 2yfx_A 34 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILME 113 (327)
T ss_dssp EEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred EEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcEEEEe
Confidence 357899999999999984 246789999996542 334578899999999999999999999999999999999
Q ss_pred ecCCCchhhhhccCCCC--CCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCC---CCeEEeccCCCCC
Q 036334 422 YMPAGSLSALLHGSRGS--GRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPD---HDACVSDFGLNPL 496 (654)
Q Consensus 422 ~~~~g~L~~~l~~~~~~--~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~---~~~kl~Dfgla~~ 496 (654)
|+++|+|.+++...... ....+++..++.++.|++.||+|||+++ |+||||||+||+++.+ ..+||+|||++..
T Consensus 114 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~-i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~ 192 (327)
T 2yfx_A 114 LMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH-FIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 192 (327)
T ss_dssp CCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESCSSTTCCEEECCCHHHHH
T ss_pred cCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC-eecCcCCHhHEEEecCCCcceEEECccccccc
Confidence 99999999999754321 2245899999999999999999999998 9999999999999954 4699999999864
Q ss_pred cCCC------CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhchhhh
Q 036334 497 FGNT------TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAE 569 (654)
Q Consensus 497 ~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 569 (654)
.... ....++..|+|||++.+..++.++||||||+++|||++ |..||..... ......+.....
T Consensus 193 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~------~~~~~~~~~~~~--- 263 (327)
T 2yfx_A 193 IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN------QEVLEFVTSGGR--- 263 (327)
T ss_dssp HHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH------HHHHHHHHTTCC---
T ss_pred cccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCH------HHHHHHHhcCCC---
Confidence 3221 22344667999999988899999999999999999998 8999865321 111111111110
Q ss_pred hhhHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcC
Q 036334 570 VFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRG 619 (654)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 619 (654)
..........+.+++.+||+.||++||++.++++.|+.+...
T Consensus 264 --------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~ 305 (327)
T 2yfx_A 264 --------MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 305 (327)
T ss_dssp --------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred --------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcC
Confidence 001112234577888899999999999999999999988754
No 177
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=2.3e-38 Score=349.14 Aligned_cols=240 Identities=20% Similarity=0.325 Sum_probs=194.5
Q ss_pred hccccccCceeEEEEEec-CCcEEEEEEecccc----cCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCC
Q 036334 351 AEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVA----VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPA 425 (654)
Q Consensus 351 ~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~ 425 (654)
.++||+|+||+||+|... +|+.||+|++.+.. .....+.+|++++++++||||+++++++.+.+..|+||||+++
T Consensus 190 ~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~g 269 (543)
T 3c4z_A 190 FRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNG 269 (543)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEeccC
Confidence 367999999999999975 58999999997542 2346788999999999999999999999999999999999999
Q ss_pred CchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCCC----
Q 036334 426 GSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTT---- 501 (654)
Q Consensus 426 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~---- 501 (654)
|+|.+++..... ....+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++.......
T Consensus 270 g~L~~~l~~~~~-~~~~l~e~~~~~~~~qi~~aL~~LH~~g-IvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~~~~ 347 (543)
T 3c4z_A 270 GDIRYHIYNVDE-DNPGFQEPRAIFYTAQIVSGLEHLHQRN-IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTK 347 (543)
T ss_dssp CBHHHHHHTSST-TSCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCCBC
T ss_pred CCHHHHHHHhhc-ccccccHHHHHHHHHHHHHHHHHHHHcC-CcccCCChHHEEEeCCCCEEEeecceeeeccCCCcccc
Confidence 999999975432 2346999999999999999999999998 9999999999999999999999999998764332
Q ss_pred CCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccCCh
Q 036334 502 PPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNI 581 (654)
Q Consensus 502 ~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 581 (654)
...+|+.|+|||++.+..++.++|||||||++|||++|+.||...... .........+..... ...
T Consensus 348 ~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~--~~~~~~~~~i~~~~~------------~~p 413 (543)
T 3c4z_A 348 GYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK--VENKELKQRVLEQAV------------TYP 413 (543)
T ss_dssp CCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCC--CCHHHHHHHHHHCCC------------CCC
T ss_pred cccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccc--hhHHHHHHHHhhccc------------CCC
Confidence 236788899999999999999999999999999999999999764321 122222222221110 001
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCH
Q 036334 582 EEEMVQLLQIAMGCVSTVPDQRPAM 606 (654)
Q Consensus 582 ~~~~~~l~~l~~~cl~~dP~~RPs~ 606 (654)
......+.+++.+||+.||++||++
T Consensus 414 ~~~s~~~~~li~~lL~~dP~~R~~~ 438 (543)
T 3c4z_A 414 DKFSPASKDFCEALLQKDPEKRLGF 438 (543)
T ss_dssp TTSCHHHHHHHHHHSCSSGGGSCCC
T ss_pred cccCHHHHHHHHHhccCCHhHCCCC
Confidence 1122356677889999999999976
No 178
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=1.7e-38 Score=325.99 Aligned_cols=239 Identities=21% Similarity=0.321 Sum_probs=195.5
Q ss_pred hhccccccCceeEEEEEec-CCcEEEEEEecccc----cCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecC
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVA----VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMP 424 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~ 424 (654)
..+.||+|+||.||++... +++.||+|++.... ...+.+.+|+.++++++||||+++++++.+.+..++||||++
T Consensus 19 ~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 98 (294)
T 2rku_A 19 RGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCR 98 (294)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEecCC
Confidence 3578999999999999976 47899999987543 234567889999999999999999999999999999999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC----
Q 036334 425 AGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT---- 500 (654)
Q Consensus 425 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~---- 500 (654)
+++|.+++.. ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++......
T Consensus 99 ~~~L~~~~~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~ 172 (294)
T 2rku_A 99 RRSLLELHKR-----RKALTEPEARYYLRQIVLGCQYLHRNR-VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK 172 (294)
T ss_dssp TCBHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECCSTTCCB
T ss_pred CCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChHhEEEcCCCCEEEEeccCceecccCcccc
Confidence 9999998863 245899999999999999999999998 999999999999999999999999998765422
Q ss_pred CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccCC
Q 036334 501 TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHN 580 (654)
Q Consensus 501 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 580 (654)
....++..|+|||.+.+..++.++||||||+++|||++|+.||..... ............ ..
T Consensus 173 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~------~~~~~~~~~~~~------------~~ 234 (294)
T 2rku_A 173 KVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL------KETYLRIKKNEY------------SI 234 (294)
T ss_dssp CCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHTTCC------------CC
T ss_pred ccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHhhccC------------CC
Confidence 234567789999999998999999999999999999999999965321 111111111110 00
Q ss_pred hHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 036334 581 IEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRM 612 (654)
Q Consensus 581 ~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 612 (654)
.......+.+++.+||+.||++|||++|+++.
T Consensus 235 ~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 235 PKHINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ccccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 11122356778889999999999999999875
No 179
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=6.8e-39 Score=335.31 Aligned_cols=255 Identities=19% Similarity=0.283 Sum_probs=198.0
Q ss_pred hhccccccCceeEEEEEe--cCCcEEEEEEecccccCHHHHHHHHHHHhccCCC------ccccccEEEEeCCceEEEEE
Q 036334 350 SAEVLGKGSVGTSYKAVL--EEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHD------NVVPLRAFYYSKDEKLLVYD 421 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~--~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~hp------niv~l~~~~~~~~~~~lv~e 421 (654)
+.+.||+|+||.||+|.. .+|+.||||+++......+.+.+|+++++.++|+ +++++++++.+.+..++|||
T Consensus 18 ~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~lv~e 97 (339)
T 1z57_A 18 IVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFE 97 (339)
T ss_dssp EEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEEEEEE
T ss_pred EEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEEEEEc
Confidence 357899999999999986 3588999999987655567788999999888655 49999999999999999999
Q ss_pred ecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECC-------------------
Q 036334 422 YMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRP------------------- 482 (654)
Q Consensus 422 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~------------------- 482 (654)
|+ +++|.+++.... ...+++..++.++.|++.||+|||+++ |+||||||+|||++.
T Consensus 98 ~~-~~~l~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~ 172 (339)
T 1z57_A 98 LL-GLSTYDFIKENG---FLPFRLDHIRKMAYQICKSVNFLHSNK-LTHTDLKPENILFVQSDYTEAYNPKIKRDERTLI 172 (339)
T ss_dssp CC-CCBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESCCCEEEEEC----CEEEEES
T ss_pred CC-CCCHHHHHHhcC---CCCCcHHHHHHHHHHHHHHHHHHHHCC-CcCCCCCHHHEEEeccccccccCCcccccccccc
Confidence 99 889999997542 346899999999999999999999998 999999999999987
Q ss_pred CCCeEEeccCCCCCcCCC-CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHH
Q 036334 483 DHDACVSDFGLNPLFGNT-TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSV 561 (654)
Q Consensus 483 ~~~~kl~Dfgla~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~ 561 (654)
++.+||+|||++...... ....++..|+|||++.+..++.++|||||||++|||++|+.||......+ ....+...
T Consensus 173 ~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~---~~~~~~~~ 249 (339)
T 1z57_A 173 NPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKE---HLAMMERI 249 (339)
T ss_dssp CCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHH---HHHHHHHH
T ss_pred CCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHH---HHHHHHHH
Confidence 668999999999876543 34567888999999999999999999999999999999999997543221 11111111
Q ss_pred hhh---chhh--------------------------hhhhHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 036334 562 VRE---EWTA--------------------------EVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRM 612 (654)
Q Consensus 562 ~~~---~~~~--------------------------~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 612 (654)
... .... ..................++.+++.+||+.||++|||++|+++.
T Consensus 250 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 329 (339)
T 1z57_A 250 LGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKH 329 (339)
T ss_dssp HCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred hCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcC
Confidence 100 0000 00000000011123445678899999999999999999999854
No 180
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=7.4e-39 Score=338.64 Aligned_cols=190 Identities=22% Similarity=0.363 Sum_probs=167.3
Q ss_pred hccccccCceeEEEEEec-CCcEEEEEEecccc--cCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCCCc
Q 036334 351 AEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVA--VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGS 427 (654)
Q Consensus 351 ~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g~ 427 (654)
.+.||+|+||.||+|... +|..||+|+++... ...+.+.+|+.++++++||||+++++++.+++..++||||+++|+
T Consensus 38 ~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 117 (360)
T 3eqc_A 38 ISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGS 117 (360)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECCCTTCB
T ss_pred eeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEECCCCCC
Confidence 478999999999999965 68999999987652 234678899999999999999999999999999999999999999
Q ss_pred hhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcc-CCeecCCCCCCcEEECCCCCeEEeccCCCCCcC--CCCCCC
Q 036334 428 LSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS-GKIVHGNIKASNILLRPDHDACVSDFGLNPLFG--NTTPPT 504 (654)
Q Consensus 428 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~--~~~~~~ 504 (654)
|.+++... ..+++..+..++.|++.||+|||++ + |+||||||+||+++.++.+||+|||++.... ......
T Consensus 118 L~~~l~~~-----~~~~~~~~~~i~~~i~~~l~~lh~~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 191 (360)
T 3eqc_A 118 LDQVLKKA-----GRIPEQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV 191 (360)
T ss_dssp HHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHHHC-CCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC----C
T ss_pred HHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHhCC-EEcCCccHHHEEECCCCCEEEEECCCCcccccccccCCC
Confidence 99999743 3589999999999999999999986 6 9999999999999999999999999986542 223346
Q ss_pred ccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 036334 505 RVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQAS 546 (654)
Q Consensus 505 ~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~ 546 (654)
++..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 192 gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 233 (360)
T 3eqc_A 192 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP 233 (360)
T ss_dssp CCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCC
T ss_pred CCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 788899999999999999999999999999999999999753
No 181
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=1.2e-38 Score=328.85 Aligned_cols=244 Identities=22% Similarity=0.332 Sum_probs=194.6
Q ss_pred HhhccccccCceeEEEEEec-CCcEEEEEEecccc-cCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCCC
Q 036334 349 ASAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVA-VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAG 426 (654)
Q Consensus 349 ~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g 426 (654)
.+.+.||+|+||.||++... +|+.||+|+++... ...+.+.+|+.++++++||||+++++++.+.+..++||||++++
T Consensus 12 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 91 (304)
T 2jam_A 12 IFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGG 91 (304)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred eeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcCCCc
Confidence 34678999999999999965 68999999997653 33456889999999999999999999999999999999999999
Q ss_pred chhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEE---CCCCCeEEeccCCCCCcCCCC--
Q 036334 427 SLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILL---RPDHDACVSDFGLNPLFGNTT-- 501 (654)
Q Consensus 427 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll---~~~~~~kl~Dfgla~~~~~~~-- 501 (654)
+|.+++... ..+++..++.++.|++.||+|||+++ |+||||||+||++ +.++.+||+|||++.......
T Consensus 92 ~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~ 165 (304)
T 2jam_A 92 ELFDRILER-----GVYTEKDASLVIQQVLSAVKYLHENG-IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMS 165 (304)
T ss_dssp BHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTTH
T ss_pred cHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCccc
Confidence 999998632 35899999999999999999999998 9999999999999 778899999999987654332
Q ss_pred CCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccCCh
Q 036334 502 PPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNI 581 (654)
Q Consensus 502 ~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 581 (654)
...++..|+|||++.+..++.++|||||||++|||++|+.||..... ......+....... .. ...
T Consensus 166 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~~i~~~~~~~---~~-----~~~ 231 (304)
T 2jam_A 166 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE------SKLFEKIKEGYYEF---ES-----PFW 231 (304)
T ss_dssp HHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHHHCCCCC---CT-----TTT
T ss_pred cccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH------HHHHHHHHcCCCCC---Cc-----ccc
Confidence 12367789999999999999999999999999999999999975321 11122221111100 00 001
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 036334 582 EEEMVQLLQIAMGCVSTVPDQRPAMQEVVRM 612 (654)
Q Consensus 582 ~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 612 (654)
......+.+++.+||+.||++|||++|+++.
T Consensus 232 ~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 232 DDISESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp TTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred ccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1122456778889999999999999999873
No 182
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=1.6e-38 Score=326.04 Aligned_cols=242 Identities=23% Similarity=0.304 Sum_probs=191.4
Q ss_pred ccccccCceeEEEEEe-cCCcEEEEEEecccc-cCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCCCchh
Q 036334 352 EVLGKGSVGTSYKAVL-EEGTTVVVKRLKEVA-VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSLS 429 (654)
Q Consensus 352 ~~lg~G~fg~Vy~~~~-~~g~~vavK~~~~~~-~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g~L~ 429 (654)
.+||+|+||.||+|.. .+++.||||++.... ...+.+.+|+.++++++||||+++++++.+.+..++||||+++++|.
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 107 (295)
T 2clq_A 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLS 107 (295)
T ss_dssp CEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEHH
T ss_pred EEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCHH
Confidence 4799999999999995 458899999987653 33567889999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECC-CCCeEEeccCCCCCcCCC----CCCC
Q 036334 430 ALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRP-DHDACVSDFGLNPLFGNT----TPPT 504 (654)
Q Consensus 430 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~-~~~~kl~Dfgla~~~~~~----~~~~ 504 (654)
+++.... ....+++..++.++.|++.||+|||+++ |+||||||+||+++. ++.+||+|||++...... ....
T Consensus 108 ~~l~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 184 (295)
T 2clq_A 108 ALLRSKW--GPLKDNEQTIGFYTKQILEGLKYLHDNQ-IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT 184 (295)
T ss_dssp HHHHHTT--CCCTTCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----CCCC
T ss_pred HHHHhhc--cCCCccHHHHHHHHHHHHHHHHHHHhCC-EEccCCChhhEEEECCCCCEEEeecccccccCCCCCcccccC
Confidence 9997542 2345789999999999999999999998 999999999999987 899999999998766432 2345
Q ss_pred ccccccCccccCCC--CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccCChH
Q 036334 505 RVAGYRAPEVVETR--KVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIE 582 (654)
Q Consensus 505 ~~~~y~aPE~~~~~--~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 582 (654)
++..|+|||++.+. .++.++||||||+++|||++|+.||....... ........... ......
T Consensus 185 ~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-----~~~~~~~~~~~----------~~~~~~ 249 (295)
T 2clq_A 185 GTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQ-----AAMFKVGMFKV----------HPEIPE 249 (295)
T ss_dssp CCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHH-----HHHHHHHHHCC----------CCCCCT
T ss_pred CCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchh-----HHHHhhccccc----------cccccc
Confidence 67789999998764 38899999999999999999999996432110 00000000000 001111
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 036334 583 EEMVQLLQIAMGCVSTVPDQRPAMQEVVR 611 (654)
Q Consensus 583 ~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 611 (654)
....++.+++.+||+.||++|||++|+++
T Consensus 250 ~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 250 SMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp TSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred cCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 22345677888999999999999999976
No 183
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.1e-38 Score=325.81 Aligned_cols=239 Identities=20% Similarity=0.278 Sum_probs=195.9
Q ss_pred hhccccccCceeEEEEEec-CCcEEEEEEecccc----cCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecC
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVA----VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMP 424 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~ 424 (654)
+.+.||+|+||.||+|... +++.||+|++.... .....+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 18 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 97 (284)
T 2vgo_A 18 IGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAP 97 (284)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred eeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEEeCC
Confidence 4578999999999999965 57889999986542 234678899999999999999999999999999999999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC--CC
Q 036334 425 AGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT--TP 502 (654)
Q Consensus 425 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~--~~ 502 (654)
+|+|.+++... ..+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++...... ..
T Consensus 98 ~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 171 (284)
T 2vgo_A 98 RGELYKELQKH-----GRFDEQRSATFMEELADALHYCHERK-VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRT 171 (284)
T ss_dssp TEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCSGGGEEECTTCCEEECCCTTCEECSSSCBCC
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCHHHEEEcCCCCEEEecccccccCccccccc
Confidence 99999999743 35899999999999999999999998 999999999999999999999999998655432 33
Q ss_pred CCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccCChH
Q 036334 503 PTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIE 582 (654)
Q Consensus 503 ~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 582 (654)
..++..|+|||++.+..++.++||||||+++|||++|+.||..... ......+..... . . ..
T Consensus 172 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~~~~~~~~-------~--~---~~ 233 (284)
T 2vgo_A 172 MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH------TETHRRIVNVDL-------K--F---PP 233 (284)
T ss_dssp CCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHTTCC-------C--C---CT
T ss_pred ccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCH------hHHHHHHhcccc-------C--C---CC
Confidence 4567889999999999999999999999999999999999975321 111111111110 0 0 11
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 036334 583 EEMVQLLQIAMGCVSTVPDQRPAMQEVVRM 612 (654)
Q Consensus 583 ~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 612 (654)
.....+.+++.+||+.||++|||++|+++.
T Consensus 234 ~~~~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 234 FLSDGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp TSCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred cCCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 122356778889999999999999999873
No 184
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=1e-38 Score=326.93 Aligned_cols=240 Identities=24% Similarity=0.390 Sum_probs=190.2
Q ss_pred hccccccCceeEEEEEec-CCcEEEEEEecccccC---HHHHHHHHHHHhccCCCccccccEEEEe----CCceEEEEEe
Q 036334 351 AEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAVG---KREFEMQMEVLGKIKHDNVVPLRAFYYS----KDEKLLVYDY 422 (654)
Q Consensus 351 ~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~e~~~l~~l~hpniv~l~~~~~~----~~~~~lv~e~ 422 (654)
.+.||+|+||.||+|... ++..||+|++...... .+.+.+|+.++++++||||+++++++.. ....++||||
T Consensus 31 ~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~ 110 (290)
T 1t4h_A 31 DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTEL 110 (290)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEEC
T ss_pred eeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEEe
Confidence 467999999999999864 5789999998765332 4568899999999999999999999875 3457999999
Q ss_pred cCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccC-CeecCCCCCCcEEEC-CCCCeEEeccCCCCCcCCC
Q 036334 423 MPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSG-KIVHGNIKASNILLR-PDHDACVSDFGLNPLFGNT 500 (654)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-~ivHrDlk~~NIll~-~~~~~kl~Dfgla~~~~~~ 500 (654)
+++|+|.+++... ..+++..++.++.|++.||+|||+.+ +|+||||||+||+++ .++.+||+|||++......
T Consensus 111 ~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~ 185 (290)
T 1t4h_A 111 MTSGTLKTYLKRF-----KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS 185 (290)
T ss_dssp CCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTT
T ss_pred cCCCCHHHHHHHc-----cCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCccccccc
Confidence 9999999999742 45899999999999999999999875 499999999999998 7899999999999765443
Q ss_pred C--CCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhcc
Q 036334 501 T--PPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRY 578 (654)
Q Consensus 501 ~--~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 578 (654)
. ...++..|+|||++. +.++.++|||||||++|||++|+.||..... .......... ......++
T Consensus 186 ~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~-----~~~~~~~~~~-~~~~~~~~------ 252 (290)
T 1t4h_A 186 FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQN-----AAQIYRRVTS-GVKPASFD------ 252 (290)
T ss_dssp SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSS-----HHHHHHHHTT-TCCCGGGG------
T ss_pred ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCc-----HHHHHHHHhc-cCCccccC------
Confidence 2 345678899999886 4589999999999999999999999965322 1122221111 11111111
Q ss_pred CChHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 036334 579 HNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVR 611 (654)
Q Consensus 579 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 611 (654)
.....++.+++.+||+.||++|||++|+++
T Consensus 253 ---~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 253 ---KVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp ---GCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ---CCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 011135778888999999999999999986
No 185
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=2.4e-38 Score=326.37 Aligned_cols=241 Identities=23% Similarity=0.346 Sum_probs=197.5
Q ss_pred hhccccccCceeEEEEEec-CCcEEEEEEecccc--cCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCCC
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVA--VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAG 426 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g 426 (654)
..+.||+|+||.||+|... +++.||+|++.... ...+.+.+|+.++++++||||+++++++.+.+..++||||++++
T Consensus 26 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 105 (303)
T 3a7i_A 26 KLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGG 105 (303)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTE
T ss_pred HhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCCCC
Confidence 3578999999999999854 58899999987543 34578899999999999999999999999999999999999999
Q ss_pred chhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC----CC
Q 036334 427 SLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT----TP 502 (654)
Q Consensus 427 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~----~~ 502 (654)
+|.+++.. ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++...... ..
T Consensus 106 ~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 178 (303)
T 3a7i_A 106 SALDLLEP------GPLDETQIATILREILKGLDYLHSEK-KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT 178 (303)
T ss_dssp EHHHHHTT------SCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCBCC
T ss_pred cHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCChheEEECCCCCEEEeecccceecCccccccCc
Confidence 99999862 35899999999999999999999998 999999999999999999999999998765432 23
Q ss_pred CCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccCChH
Q 036334 503 PTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIE 582 (654)
Q Consensus 503 ~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 582 (654)
..++..|+|||++.+..++.++||||||+++|||++|+.||..... ......+ ...... ....
T Consensus 179 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~-~~~~~~----------~~~~ 241 (303)
T 3a7i_A 179 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHP------MKVLFLI-PKNNPP----------TLEG 241 (303)
T ss_dssp CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHH-HHSCCC----------CCCS
T ss_pred cCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCH------HHHHHHh-hcCCCC----------CCcc
Confidence 4567789999999999999999999999999999999999964321 1111111 111000 0011
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 036334 583 EEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIE 614 (654)
Q Consensus 583 ~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 614 (654)
.....+.+++.+||+.||++|||+.|+++...
T Consensus 242 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~ 273 (303)
T 3a7i_A 242 NYSKPLKEFVEACLNKEPSFRPTAKELLKHKF 273 (303)
T ss_dssp SCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHH
T ss_pred ccCHHHHHHHHHHcCCChhhCcCHHHHhhChh
Confidence 12235777888999999999999999988644
No 186
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=2e-38 Score=335.85 Aligned_cols=242 Identities=21% Similarity=0.349 Sum_probs=193.4
Q ss_pred hhccccccCceeEEEEEec-CCcEEEEEEecccccC---------HHHHHHHHHHHhcc-CCCccccccEEEEeCCceEE
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAVG---------KREFEMQMEVLGKI-KHDNVVPLRAFYYSKDEKLL 418 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~---------~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~~~~l 418 (654)
+.+.||+|+||.||+|... +|+.||||++...... .+.+.+|+.+++++ +||||+++++++...+..++
T Consensus 98 ~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 177 (365)
T 2y7j_A 98 PKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFL 177 (365)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEEEE
T ss_pred cceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEEEE
Confidence 3478999999999999975 6999999998654311 34577899999999 79999999999999999999
Q ss_pred EEEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcC
Q 036334 419 VYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFG 498 (654)
Q Consensus 419 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~ 498 (654)
||||+++++|.+++.. ...+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++....
T Consensus 178 v~e~~~g~~L~~~l~~-----~~~l~~~~~~~i~~qi~~~L~~LH~~g-i~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~ 251 (365)
T 2y7j_A 178 VFDLMRKGELFDYLTE-----KVALSEKETRSIMRSLLEAVSFLHANN-IVHRDLKPENILLDDNMQIRLSDFGFSCHLE 251 (365)
T ss_dssp EECCCTTCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEeCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEEEecCcccccC
Confidence 9999999999999973 245899999999999999999999998 9999999999999999999999999987665
Q ss_pred CC---CCCCccccccCccccCC------CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhh
Q 036334 499 NT---TPPTRVAGYRAPEVVET------RKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAE 569 (654)
Q Consensus 499 ~~---~~~~~~~~y~aPE~~~~------~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 569 (654)
.. ....++..|+|||++.+ ..++.++|||||||++|||++|+.||..... ......+.......
T Consensus 252 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~------~~~~~~i~~~~~~~- 324 (365)
T 2y7j_A 252 PGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQ------ILMLRMIMEGQYQF- 324 (365)
T ss_dssp TTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHTCCCC-
T ss_pred CCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCH------HHHHHHHHhCCCCC-
Confidence 33 33567788999999853 3588999999999999999999999965321 11111111111100
Q ss_pred hhhHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 036334 570 VFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVR 611 (654)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 611 (654)
....+. .....+.+++.+||+.||++|||++|+++
T Consensus 325 ----~~~~~~---~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 325 ----SSPEWD---DRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp ----CHHHHS---SSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred ----CCcccc---cCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 000001 11235677888999999999999999986
No 187
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=1.5e-38 Score=332.37 Aligned_cols=254 Identities=22% Similarity=0.323 Sum_probs=191.3
Q ss_pred hhccccccCceeEEEEEec-CCcEEEEEEecccccC---HHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCC
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAVG---KREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPA 425 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~ 425 (654)
..+.||+|+||.||+|... +|+.||||++...... .+.+.+|+.++++++||||+++++++.+.+..++||||+++
T Consensus 29 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 108 (331)
T 4aaa_A 29 NLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDH 108 (331)
T ss_dssp EEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred eeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEecCCc
Confidence 4578999999999999965 4899999998655333 34577899999999999999999999999999999999999
Q ss_pred CchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC----C
Q 036334 426 GSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT----T 501 (654)
Q Consensus 426 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~----~ 501 (654)
++|.+++.. ...+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++...... .
T Consensus 109 ~~l~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 182 (331)
T 4aaa_A 109 TILDDLELF-----PNGLDYQVVQKYLFQIINGIGFCHSHN-IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYD 182 (331)
T ss_dssp EHHHHHHHS-----TTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCTTC-----------
T ss_pred chHHHHHhh-----ccCCCHHHHHHHHHHHHHHHHHHHHCC-EEccCcChheEEEcCCCcEEEEeCCCceeecCCccccC
Confidence 999988763 345899999999999999999999998 999999999999999999999999999765432 2
Q ss_pred CCCccccccCccccCCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhh-----------hc-hhh
Q 036334 502 PPTRVAGYRAPEVVETR-KVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVR-----------EE-WTA 568 (654)
Q Consensus 502 ~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~-----------~~-~~~ 568 (654)
...++..|+|||++.+. .++.++|||||||++|||++|+.||......+ ....+..... .. ...
T Consensus 183 ~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (331)
T 4aaa_A 183 DEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDID---QLYHIMMCLGNLIPRHQELFNKNPVFA 259 (331)
T ss_dssp -CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCSCCHHHHHHHHHCGGGT
T ss_pred CCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHH---HHHHHHHHhCCCChhhhhHhhhccccc
Confidence 34567789999999775 78999999999999999999999997643211 0000000000 00 000
Q ss_pred hhhhHhhhccCCh----HHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 036334 569 EVFDVELMRYHNI----EEEMVQLLQIAMGCVSTVPDQRPAMQEVVRM 612 (654)
Q Consensus 569 ~~~~~~~~~~~~~----~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 612 (654)
....+........ ......+.+++.+||+.||++|||++|+++.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 260 GVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp TCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred cccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0000000000000 0123457788889999999999999998763
No 188
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=2.2e-38 Score=346.10 Aligned_cols=183 Identities=26% Similarity=0.373 Sum_probs=147.3
Q ss_pred hhccccccCceeEEEEEec-CCcEEEEEEeccccc---CHHHHHHHHHHHhccCCCccccccEEEEeC-----CceEEEE
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAV---GKREFEMQMEVLGKIKHDNVVPLRAFYYSK-----DEKLLVY 420 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~e~~~l~~l~hpniv~l~~~~~~~-----~~~~lv~ 420 (654)
+.++||+|+||+||+|... +|+.||||++..... ..+++.+|++++++++||||+++++++... ...|+||
T Consensus 57 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~ 136 (458)
T 3rp9_A 57 IRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVL 136 (458)
T ss_dssp ECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEE
T ss_pred EeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEEEE
Confidence 4578999999999999855 689999999876432 345688999999999999999999998543 4689999
Q ss_pred EecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC
Q 036334 421 DYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT 500 (654)
Q Consensus 421 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~ 500 (654)
||+ +|+|.+++.. ...+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 137 e~~-~~~L~~~~~~-----~~~l~~~~~~~~~~qi~~aL~~LH~~~-iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~ 209 (458)
T 3rp9_A 137 EIA-DSDFKKLFRT-----PVYLTELHIKTLLYNLLVGVKYVHSAG-ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYP 209 (458)
T ss_dssp CCC-SEEHHHHHHS-----SCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTCCEEECCCTTCBCTTSC
T ss_pred ecc-ccchhhhccc-----CCCCCHHHHHHHHHHHHHHHHHHHhCC-cCCCCCChhhEEECCCCCEeecccccchhccCc
Confidence 998 5799999873 346999999999999999999999998 999999999999999999999999999876421
Q ss_pred -------------------------------CCCCccccccCcccc-CCCCCCcchhHHHHHHHHHHHHhC
Q 036334 501 -------------------------------TPPTRVAGYRAPEVV-ETRKVTFKSDVYSFGVLLLELLTG 539 (654)
Q Consensus 501 -------------------------------~~~~~~~~y~aPE~~-~~~~~~~~~DvwslGvil~el~tg 539 (654)
....+|..|+|||++ .+..++.++|||||||++|||++|
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 210 ENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp TTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred cccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 122457779999986 566799999999999999999993
No 189
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.6e-39 Score=336.98 Aligned_cols=253 Identities=18% Similarity=0.270 Sum_probs=187.7
Q ss_pred hhccccccCceeEEEEEec-CCcEEEEEEecccccC--HHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCCC
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAVG--KREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAG 426 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~--~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g 426 (654)
+.+.||+|+||+||+|... +++.||||+++..... ...+.+|++++++++||||+++++++.+++..++||||++ |
T Consensus 6 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~ 84 (324)
T 3mtl_A 6 KLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-K 84 (324)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCS-E
T ss_pred EEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecccc-c
Confidence 3578999999999999965 6899999998754322 2245579999999999999999999999999999999997 5
Q ss_pred chhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC----CC
Q 036334 427 SLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT----TP 502 (654)
Q Consensus 427 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~----~~ 502 (654)
+|.+++... ...+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++...... ..
T Consensus 85 ~l~~~~~~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~ 159 (324)
T 3mtl_A 85 DLKQYLDDC----GNIINMHNVKLFLFQLLRGLAYCHRQK-VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDN 159 (324)
T ss_dssp EHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHHTT-EEESSCCGGGEEECTTCCEEECSSSEEECC---------
T ss_pred CHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCcCHHHEEECCCCCEEEccCcccccccCCcccccc
Confidence 899888743 345899999999999999999999998 999999999999999999999999998765432 22
Q ss_pred CCccccccCccccCC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhc---hhhhhhh-Hhhhc
Q 036334 503 PTRVAGYRAPEVVET-RKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREE---WTAEVFD-VELMR 577 (654)
Q Consensus 503 ~~~~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~ 577 (654)
..++..|+|||++.+ ..++.++|||||||++|||++|+.||......+ ....+....... ....... .....
T Consensus 160 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 236 (324)
T 3mtl_A 160 EVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE---QLHFIFRILGTPTEETWPGILSNEEFKT 236 (324)
T ss_dssp ---CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCCCCTTTSTTGGGCHHHHH
T ss_pred ccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHhCCCChHhchhhhcchhhcc
Confidence 355778999999876 568999999999999999999999997643211 111111111100 0000000 00000
Q ss_pred -------cCC----hHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 036334 578 -------YHN----IEEEMVQLLQIAMGCVSTVPDQRPAMQEVVR 611 (654)
Q Consensus 578 -------~~~----~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 611 (654)
... ......++.+++.+||+.||++|||++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 237 YNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp TCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred cccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 000 0011235677888999999999999999987
No 190
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=4.7e-38 Score=328.21 Aligned_cols=249 Identities=18% Similarity=0.279 Sum_probs=191.2
Q ss_pred hhccccccCceeEEEEEe-cCCcEEEEEEecccccCHHHHHHHHHHHhccC-CCccccccEEEEe--CCceEEEEEecCC
Q 036334 350 SAEVLGKGSVGTSYKAVL-EEGTTVVVKRLKEVAVGKREFEMQMEVLGKIK-HDNVVPLRAFYYS--KDEKLLVYDYMPA 425 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~-hpniv~l~~~~~~--~~~~~lv~e~~~~ 425 (654)
+.+.||+|+||.||+|.. .+++.||||+++.. ..+.+.+|++++++++ ||||+++++++.+ ....++||||+++
T Consensus 40 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~ 117 (330)
T 3nsz_A 40 LVRKLGRGKYSEVFEAINITNNEKVVVKILKPV--KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNN 117 (330)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECSC--CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCCC
T ss_pred EEEEecccCCeEEEEEEECCCCcEEEEEEeccc--chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccCc
Confidence 357899999999999985 56899999998743 3567899999999997 9999999999987 5678999999999
Q ss_pred CchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCC-CeEEeccCCCCCcCCC---C
Q 036334 426 GSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDH-DACVSDFGLNPLFGNT---T 501 (654)
Q Consensus 426 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~-~~kl~Dfgla~~~~~~---~ 501 (654)
++|.+++. .+++..++.++.|++.||+|||+++ |+||||||+|||++.++ .+||+|||++...... .
T Consensus 118 ~~l~~~~~--------~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~ 188 (330)
T 3nsz_A 118 TDFKQLYQ--------TLTDYDIRFYMYEILKALDYCHSMG-IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYN 188 (330)
T ss_dssp CCHHHHGG--------GCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCC
T ss_pred hhHHHHHH--------hCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCccc
Confidence 99999985 2889999999999999999999998 99999999999999777 8999999999765433 2
Q ss_pred CCCccccccCccccCC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHh------
Q 036334 502 PPTRVAGYRAPEVVET-RKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVE------ 574 (654)
Q Consensus 502 ~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 574 (654)
...++..|+|||++.+ ..++.++|||||||++|||++|+.||....... .....+............++..
T Consensus 189 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (330)
T 3nsz_A 189 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY--DQLVRIAKVLGTEDLYDYIDKYNIELDP 266 (330)
T ss_dssp SCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHH--HHHHHHHHHHCHHHHHHHHHHTTCCCCT
T ss_pred cccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchH--HHHHHHHHhcCCchhhhHHHHhcccccc
Confidence 3456777999999877 678999999999999999999999996432211 0000011111000000000000
Q ss_pred ----------------hhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 036334 575 ----------------LMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVR 611 (654)
Q Consensus 575 ----------------~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 611 (654)
............++.+++.+||+.||++|||++|+++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 267 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp HHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred chhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0000011112346778888999999999999999986
No 191
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=1.6e-38 Score=322.95 Aligned_cols=239 Identities=21% Similarity=0.317 Sum_probs=189.4
Q ss_pred hhccccccCceeEEEEEec-CCcEEEEEEecccc----cCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecC
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVA----VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMP 424 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~ 424 (654)
+.+.||+|+||.||+|... +|+.||||++.... ...+.+.+|+.++++++||||+++++++.+.+..++||||++
T Consensus 15 i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 94 (276)
T 2h6d_A 15 LGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVS 94 (276)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEeccC
Confidence 3578999999999999975 68999999986542 234678899999999999999999999999999999999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC---C
Q 036334 425 AGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT---T 501 (654)
Q Consensus 425 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~---~ 501 (654)
+++|.+++... ..+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++...... .
T Consensus 95 ~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~ 168 (276)
T 2h6d_A 95 GGELFDYICKH-----GRVEEMEARRLFQQILSAVDYCHRHM-VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLR 168 (276)
T ss_dssp SCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHHC-SSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-----
T ss_pred CCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCChhhEEECCCCCEEEeecccccccCCCccee
Confidence 99999999742 35899999999999999999999998 999999999999999999999999998876543 2
Q ss_pred CCCccccccCccccCCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccCC
Q 036334 502 PPTRVAGYRAPEVVETRKV-TFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHN 580 (654)
Q Consensus 502 ~~~~~~~y~aPE~~~~~~~-~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 580 (654)
...++..|+|||.+.+..+ +.++||||||+++|||++|+.||.... .......+..... ..
T Consensus 169 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~------~~~~~~~~~~~~~------------~~ 230 (276)
T 2h6d_A 169 TSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEH------VPTLFKKIRGGVF------------YI 230 (276)
T ss_dssp --------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHCCC------------CC
T ss_pred cccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCc------HHHHHHHhhcCcc------------cC
Confidence 3456778999999987765 689999999999999999999996431 1111111111100 00
Q ss_pred hHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 036334 581 IEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRM 612 (654)
Q Consensus 581 ~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 612 (654)
.......+.+++.+||+.||++|||++|+++.
T Consensus 231 ~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 231 PEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred chhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 11112356778889999999999999999874
No 192
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=4.2e-38 Score=334.27 Aligned_cols=258 Identities=21% Similarity=0.301 Sum_probs=196.1
Q ss_pred hhccccccCceeEEEEEe-cCCcEEEEEEecccccCHHHHHHHHHHHhccC-----------CCccccccEEEEeCC---
Q 036334 350 SAEVLGKGSVGTSYKAVL-EEGTTVVVKRLKEVAVGKREFEMQMEVLGKIK-----------HDNVVPLRAFYYSKD--- 414 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~-----------hpniv~l~~~~~~~~--- 414 (654)
+.+.||+|+||+||+|.. .+++.||||++.........+.+|++++++++ ||||+++++++...+
T Consensus 23 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 102 (373)
T 1q8y_A 23 LVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNG 102 (373)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTE
T ss_pred EEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCCCC
Confidence 357899999999999996 46899999999876555677889999988876 899999999988654
Q ss_pred -ceEEEEEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcc-CCeecCCCCCCcEEEC------CCCCe
Q 036334 415 -EKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS-GKIVHGNIKASNILLR------PDHDA 486 (654)
Q Consensus 415 -~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~ivHrDlk~~NIll~------~~~~~ 486 (654)
..++||||+ +++|.+++.... ...+++..++.++.||+.||+|||++ + |+||||||+|||++ ..+.+
T Consensus 103 ~~~~lv~e~~-~~~L~~~~~~~~---~~~~~~~~~~~i~~qi~~aL~~lH~~~~-ivH~Dikp~NIll~~~~~~~~~~~~ 177 (373)
T 1q8y_A 103 VHVVMVFEVL-GENLLALIKKYE---HRGIPLIYVKQISKQLLLGLDYMHRRCG-IIHTDIKPENVLMEIVDSPENLIQI 177 (373)
T ss_dssp EEEEEEECCC-CEEHHHHHHHTT---TSCCCHHHHHHHHHHHHHHHHHHHHTTC-EECSCCSGGGEEEEEEETTTTEEEE
T ss_pred ceEEEEEecC-CCCHHHHHHHhh---ccCCcHHHHHHHHHHHHHHHHHHHhcCC-EEecCCChHHeEEeccCCCcCcceE
Confidence 689999999 889999997542 34589999999999999999999998 7 99999999999994 34479
Q ss_pred EEeccCCCCCcCCC-CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhh-
Q 036334 487 CVSDFGLNPLFGNT-TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVRE- 564 (654)
Q Consensus 487 kl~Dfgla~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~- 564 (654)
||+|||++...... ....++..|+|||++.+..++.++|||||||++|||++|+.||..............+..+...
T Consensus 178 kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 257 (373)
T 1q8y_A 178 KIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELL 257 (373)
T ss_dssp EECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHH
T ss_pred EEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhc
Confidence 99999999776543 3456788899999999999999999999999999999999999865433222111111111100
Q ss_pred -c----------hhhhhh------------------hHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 036334 565 -E----------WTAEVF------------------DVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRM 612 (654)
Q Consensus 565 -~----------~~~~~~------------------~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 612 (654)
. +....+ +..............++.+++.+||+.||++|||++|+++.
T Consensus 258 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 334 (373)
T 1q8y_A 258 GELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNH 334 (373)
T ss_dssp CSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTC
T ss_pred CCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhC
Confidence 0 000000 00000122335566788899999999999999999999873
No 193
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1.3e-38 Score=335.66 Aligned_cols=254 Identities=22% Similarity=0.296 Sum_probs=190.8
Q ss_pred hhccccccCceeEEEEEe-cCCcEEEEEEecccc---cCHHHHHHHHHHHhccCCCccccccEEEEeC--------CceE
Q 036334 350 SAEVLGKGSVGTSYKAVL-EEGTTVVVKRLKEVA---VGKREFEMQMEVLGKIKHDNVVPLRAFYYSK--------DEKL 417 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~-~~g~~vavK~~~~~~---~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~--------~~~~ 417 (654)
+.+.||+|+||.||+|.. .+|+.||||++.... .....+.+|++++++++||||+++++++... +..+
T Consensus 21 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~ 100 (351)
T 3mi9_A 21 KLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIY 100 (351)
T ss_dssp EEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------CEEE
T ss_pred EEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCceEE
Confidence 457899999999999996 468999999986543 2245778999999999999999999999873 4689
Q ss_pred EEEEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCc
Q 036334 418 LVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLF 497 (654)
Q Consensus 418 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~ 497 (654)
+||||+++ +|.+.+... ...+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++...
T Consensus 101 lv~e~~~~-~l~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 174 (351)
T 3mi9_A 101 LVFDFCEH-DLAGLLSNV----LVKFTLSEIKRVMQMLLNGLYYIHRNK-ILHRDMKAANVLITRDGVLKLADFGLARAF 174 (351)
T ss_dssp EEEECCSE-EHHHHHHCT----TSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEeccCC-CHHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCHHHEEEcCCCCEEEccchhcccc
Confidence 99999975 777777643 245999999999999999999999998 999999999999999999999999998765
Q ss_pred CCC--------CCCCccccccCccccCC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhh---c
Q 036334 498 GNT--------TPPTRVAGYRAPEVVET-RKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVRE---E 565 (654)
Q Consensus 498 ~~~--------~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~---~ 565 (654)
... ....++..|+|||++.+ ..++.++|||||||++|||++|+.||......+ ....+...... .
T Consensus 175 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~---~~~~i~~~~~~~~~~ 251 (351)
T 3mi9_A 175 SLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH---QLALISQLCGSITPE 251 (351)
T ss_dssp CCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCCCCTT
T ss_pred cccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHH---HHHHHHHHhCCCChh
Confidence 421 23345778999999876 468999999999999999999999997643211 11111111100 0
Q ss_pred hhhhhhhHhhh--------ccCChHHH------HHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 036334 566 WTAEVFDVELM--------RYHNIEEE------MVQLLQIAMGCVSTVPDQRPAMQEVVRM 612 (654)
Q Consensus 566 ~~~~~~~~~~~--------~~~~~~~~------~~~l~~l~~~cl~~dP~~RPs~~evl~~ 612 (654)
.....-..... ......+. ...+.+++.+||+.||++|||++|+++.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 252 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp TSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 00000000000 00011111 2347788999999999999999999874
No 194
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=1.6e-39 Score=345.11 Aligned_cols=246 Identities=13% Similarity=0.033 Sum_probs=174.7
Q ss_pred hhccccccCceeEEEEEec-CCcEEEEEEeccccc----CHHHHHHHHH---HHhccCCCcccccc-------EEEEeCC
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAV----GKREFEMQME---VLGKIKHDNVVPLR-------AFYYSKD 414 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~----~~~~~~~e~~---~l~~l~hpniv~l~-------~~~~~~~ 414 (654)
..+.||+|+||.||+|.+. +|+.||||+++.... ..+.+.+|+. .++. +||||++++ +++..++
T Consensus 66 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~~~~~ 144 (371)
T 3q60_A 66 LVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAVAVQS 144 (371)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEEEETT
T ss_pred eeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehheecCC
Confidence 3578999999999999965 689999999987532 2345667754 4555 799977754 5554432
Q ss_pred -----------------ceEEEEEecCCCchhhhhccCCCCCCCCCCHHHH------HHHHHHHHHHHHHhhccCCeecC
Q 036334 415 -----------------EKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNR------MRIALSAARGLAHLHVSGKIVHG 471 (654)
Q Consensus 415 -----------------~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~------~~i~~~ia~~l~~LH~~~~ivHr 471 (654)
..++||||++ |+|.+++.... ..+.+..+ +.++.|++.||+|||+++ |+||
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~----~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~-ivHr 218 (371)
T 3q60_A 145 QPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD----FVYVFRGDEGILALHILTAQLIRLAANLQSKG-LVHG 218 (371)
T ss_dssp SCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH----HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT-EEET
T ss_pred CCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc----cccchhhhhhhhhHHHHHHHHHHHHHHHHHCC-CccC
Confidence 3799999998 89999997531 12455555 778899999999999998 9999
Q ss_pred CCCCCcEEECCCCCeEEeccCCCCCcCCCC-CCCccccccCccccCC--CCCCcchhHHHHHHHHHHHHhCCCCCCCCCC
Q 036334 472 NIKASNILLRPDHDACVSDFGLNPLFGNTT-PPTRVAGYRAPEVVET--RKVTFKSDVYSFGVLLLELLTGKAPNQASLG 548 (654)
Q Consensus 472 Dlk~~NIll~~~~~~kl~Dfgla~~~~~~~-~~~~~~~y~aPE~~~~--~~~~~~~DvwslGvil~el~tg~~pf~~~~~ 548 (654)
||||+|||++.++.+||+|||++....... ...++..|+|||++.+ ..++.++|||||||++|||++|+.||.....
T Consensus 219 Dikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~ 298 (371)
T 3q60_A 219 HFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTP 298 (371)
T ss_dssp TCSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCT
T ss_pred cCCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCc
Confidence 999999999999999999999998776544 4455688999999987 6799999999999999999999999987543
Q ss_pred CCCCChhHHHHHHhhhchhhhhhhHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 036334 549 EEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVR 611 (654)
Q Consensus 549 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 611 (654)
......... .......... ...........+.+++.+||+.||++|||+.|+++
T Consensus 299 ~~~~~~~~~--------~~~~~~~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 299 GIKGSWKRP--------SLRVPGTDSL-AFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp TCTTCCCBC--------CTTSCCCCSC-CCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred ccccchhhh--------hhhhcccccc-chhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 221110000 0000000000 00000122345677888999999999999999964
No 195
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.5e-39 Score=338.26 Aligned_cols=245 Identities=23% Similarity=0.306 Sum_probs=193.8
Q ss_pred HhhccccccCceeEEEEEe----cCCcEEEEEEecccc-----cCHHHHHHHHHHHhcc-CCCccccccEEEEeCCceEE
Q 036334 349 ASAEVLGKGSVGTSYKAVL----EEGTTVVVKRLKEVA-----VGKREFEMQMEVLGKI-KHDNVVPLRAFYYSKDEKLL 418 (654)
Q Consensus 349 ~~~~~lg~G~fg~Vy~~~~----~~g~~vavK~~~~~~-----~~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~~~~l 418 (654)
.+.+.||+|+||.||++.. .+|+.||||+++... ...+.+.+|+++++++ +||||+++++++...+..++
T Consensus 57 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 136 (355)
T 1vzo_A 57 ELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHL 136 (355)
T ss_dssp EEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEE
T ss_pred EEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceEEE
Confidence 3457899999999999986 368999999997542 2345677899999999 69999999999999999999
Q ss_pred EEEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcC
Q 036334 419 VYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFG 498 (654)
Q Consensus 419 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~ 498 (654)
||||+++|+|.+++... ..+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++....
T Consensus 137 v~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 210 (355)
T 1vzo_A 137 ILDYINGGELFTHLSQR-----ERFTEHEVQIYVGEIVLALEHLHKLG-IIYRDIKLENILLDSNGHVVLTDFGLSKEFV 210 (355)
T ss_dssp EECCCCSCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEESCSSEEEECC
T ss_pred EeecCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCcEEEeeCCCCeecc
Confidence 99999999999999742 35899999999999999999999998 9999999999999999999999999987653
Q ss_pred CC-----CCCCccccccCccccCC--CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhh
Q 036334 499 NT-----TPPTRVAGYRAPEVVET--RKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVF 571 (654)
Q Consensus 499 ~~-----~~~~~~~~y~aPE~~~~--~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 571 (654)
.. ....++..|+|||++.+ ..++.++|||||||++|||++|+.||....... .............
T Consensus 211 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~--~~~~~~~~~~~~~------ 282 (355)
T 1vzo_A 211 ADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN--SQAEISRRILKSE------ 282 (355)
T ss_dssp GGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC--CHHHHHHHHHHCC------
T ss_pred cCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccc--hHHHHHHHHhccC------
Confidence 22 22356788999999975 357899999999999999999999997543222 1222222211110
Q ss_pred hHhhhccCChHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHHHH
Q 036334 572 DVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRP-----AMQEVVRMI 613 (654)
Q Consensus 572 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~L 613 (654)
.....+....+.+++.+||..||++|| +++|+++..
T Consensus 283 ------~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 283 ------PPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp ------CCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred ------CCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 011112223567788899999999999 899988754
No 196
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.9e-38 Score=350.58 Aligned_cols=242 Identities=24% Similarity=0.334 Sum_probs=192.9
Q ss_pred hhccccccCceeEEEEEec-CCcEEEEEEecccc--------------cCHHHHHHHHHHHhccCCCccccccEEEEeCC
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVA--------------VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKD 414 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~--------------~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~ 414 (654)
+.+.||+|+||+||+|... +++.||+|+++... ...+.+.+|+.++++++||||+++++++.+.+
T Consensus 40 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 119 (504)
T 3q5i_A 40 KVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKK 119 (504)
T ss_dssp EEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEECSS
T ss_pred EEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC
Confidence 4578999999999999965 57899999997543 23467889999999999999999999999999
Q ss_pred ceEEEEEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCC---CeEEecc
Q 036334 415 EKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDH---DACVSDF 491 (654)
Q Consensus 415 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~---~~kl~Df 491 (654)
..++||||+++|+|.+++... ..+++..++.++.|++.||+|||+++ |+||||||+|||++.++ .+||+||
T Consensus 120 ~~~lv~e~~~gg~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~Df 193 (504)
T 3q5i_A 120 YFYLVTEFYEGGELFEQIINR-----HKFDECDAANIMKQILSGICYLHKHN-IVHRDIKPENILLENKNSLLNIKIVDF 193 (504)
T ss_dssp EEEEEEECCTTCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESSTTCCSSEEECCC
T ss_pred EEEEEEecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCcHHHEEEecCCCCccEEEEEC
Confidence 999999999999999998642 45999999999999999999999998 99999999999999876 6999999
Q ss_pred CCCCCcCCC---CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhh
Q 036334 492 GLNPLFGNT---TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTA 568 (654)
Q Consensus 492 gla~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (654)
|++...... ....+++.|+|||++. +.++.++||||+||++|+|++|..||..... ...+..+.......
T Consensus 194 g~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~~~~~i~~~~~~~ 266 (504)
T 3q5i_A 194 GLSSFFSKDYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQND------QDIIKKVEKGKYYF 266 (504)
T ss_dssp TTCEECCTTSCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHCCCCC
T ss_pred CCCEEcCCCCccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHcCCCCC
Confidence 999876543 3456788899999987 4699999999999999999999999975322 22222222221110
Q ss_pred hhhhHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 036334 569 EVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRM 612 (654)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 612 (654)
+ ...+... ..++.+++.+||+.||.+|||++|+++.
T Consensus 267 ---~--~~~~~~~---s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 267 ---D--FNDWKNI---SDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp ---C--HHHHTTS---CHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ---C--ccccCCC---CHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 0 0011111 2356778889999999999999999864
No 197
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.1e-38 Score=328.39 Aligned_cols=241 Identities=25% Similarity=0.395 Sum_probs=192.2
Q ss_pred hhccccccCceeEEEEEec-CCcEEEEEEecccccCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCCCch
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGSL 428 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g~L 428 (654)
+.+.||+|+||.||+|... +|+.||+|++.... ...++.+|+.++++++||||+++++++...+..++||||+++++|
T Consensus 33 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 111 (314)
T 3com_A 33 VLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSV 111 (314)
T ss_dssp EEEECC----CEEEEEEETTTCCEEEEEEEETTS-CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEH
T ss_pred hheeeccCCCeEEEEEEECCCCCEEEEEecCchH-HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecCCCCCH
Confidence 4578999999999999965 48999999987643 356788999999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC----CCCC
Q 036334 429 SALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT----TPPT 504 (654)
Q Consensus 429 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~----~~~~ 504 (654)
.+++... ...+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++...... ....
T Consensus 112 ~~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 186 (314)
T 3com_A 112 SDIIRLR----NKTLTEDEIATILQSTLKGLEYLHFMR-KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVI 186 (314)
T ss_dssp HHHHHHH----TCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCBCCCC
T ss_pred HHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCC-CcCCCcCHHHEEECCCCCEEEeecccchhhhhhccccCccC
Confidence 9998632 345899999999999999999999998 999999999999999999999999998765432 2345
Q ss_pred ccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccCChHHH
Q 036334 505 RVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEE 584 (654)
Q Consensus 505 ~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 584 (654)
++..|+|||.+.+..++.++||||||+++|||++|+.||..... ........... .. ........
T Consensus 187 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~-~~--------~~~~~~~~ 251 (314)
T 3com_A 187 GTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHP------MRAIFMIPTNP-PP--------TFRKPELW 251 (314)
T ss_dssp SCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHHHSC-CC--------CCSSGGGS
T ss_pred CCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCCh------HHHHHHHhcCC-Cc--------ccCCcccC
Confidence 67789999999998999999999999999999999999975321 11111111000 00 00011112
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHH
Q 036334 585 MVQLLQIAMGCVSTVPDQRPAMQEVVR 611 (654)
Q Consensus 585 ~~~l~~l~~~cl~~dP~~RPs~~evl~ 611 (654)
...+.+++.+||+.||++|||+.++++
T Consensus 252 ~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 252 SDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp CHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 346778888999999999999999976
No 198
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=2.6e-39 Score=331.24 Aligned_cols=249 Identities=23% Similarity=0.360 Sum_probs=189.4
Q ss_pred hhccccccCceeEEEEEec--CCc--EEEEEEecccc----cCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEE
Q 036334 350 SAEVLGKGSVGTSYKAVLE--EGT--TVVVKRLKEVA----VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYD 421 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~--~g~--~vavK~~~~~~----~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 421 (654)
+.+.||+|+||.||+|.+. +++ .||||+++... ...+.+.+|++++++++||||+++++++.++. .++|||
T Consensus 22 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~v~e 100 (291)
T 1u46_A 22 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTE 100 (291)
T ss_dssp EEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CEEEEE
T ss_pred eeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ceeeEe
Confidence 3578999999999999853 233 68999987542 23467889999999999999999999987654 899999
Q ss_pred ecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCCC
Q 036334 422 YMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTT 501 (654)
Q Consensus 422 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 501 (654)
|+++|+|.+++... ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++.......
T Consensus 101 ~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 175 (291)
T 1u46_A 101 LAPLGSLLDRLRKH----QGHFLLGTLSRYAVQVAEGMGYLESKR-FIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 175 (291)
T ss_dssp CCTTCBHHHHHHHH----GGGSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEEEETTEEEECCCTTCEECCC-C
T ss_pred cccCCCHHHHHHhc----cCCcCHHHHHHHHHHHHHHHHHHHhCC-cccCCCchheEEEcCCCCEEEccccccccccccc
Confidence 99999999999743 235899999999999999999999998 9999999999999999999999999987764332
Q ss_pred -------CCCccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhH
Q 036334 502 -------PPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDV 573 (654)
Q Consensus 502 -------~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 573 (654)
...++..|+|||++.+..++.++||||||+++|||++ |+.||..... ...+..+......
T Consensus 176 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~------~~~~~~~~~~~~~------ 243 (291)
T 1u46_A 176 DHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG------SQILHKIDKEGER------ 243 (291)
T ss_dssp CEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH------HHHHHHHHTSCCC------
T ss_pred cchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCH------HHHHHHHHccCCC------
Confidence 2334557999999988889999999999999999999 9999975321 2222222211110
Q ss_pred hhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCC
Q 036334 574 ELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGE 620 (654)
Q Consensus 574 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 620 (654)
.........++.+++.+||+.||++|||+.++++.|+++....
T Consensus 244 ----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 286 (291)
T 1u46_A 244 ----LPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTD 286 (291)
T ss_dssp ----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred ----CCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccc
Confidence 0111122346778888999999999999999999999987654
No 199
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=2e-38 Score=349.61 Aligned_cols=244 Identities=23% Similarity=0.334 Sum_probs=192.0
Q ss_pred HHhhccccccCceeEEEEEec-CCcEEEEEEecccc---cCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEec
Q 036334 348 RASAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVA---VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYM 423 (654)
Q Consensus 348 ~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 423 (654)
|.+.+.||+|+||+||+|... ++..||+|+++... .....+.+|+.++++++||||++++++|.+.+..++||||+
T Consensus 39 y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 118 (494)
T 3lij_A 39 YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECY 118 (494)
T ss_dssp EEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred eEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecC
Confidence 445688999999999999965 58899999997642 33567889999999999999999999999999999999999
Q ss_pred CCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCC---CCeEEeccCCCCCcCCC
Q 036334 424 PAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPD---HDACVSDFGLNPLFGNT 500 (654)
Q Consensus 424 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~---~~~kl~Dfgla~~~~~~ 500 (654)
++|+|.+++.. ...+++..++.++.|++.||+|||+++ |+||||||+|||++.. +.+||+|||++......
T Consensus 119 ~~g~L~~~~~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~ 192 (494)
T 3lij_A 119 KGGELFDEIIH-----RMKFNEVDAAVIIKQVLSGVTYLHKHN-IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ 192 (494)
T ss_dssp CSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTT
T ss_pred CCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCC
Confidence 99999998863 245899999999999999999999998 9999999999999764 45999999999766433
Q ss_pred ---CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhc
Q 036334 501 ---TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMR 577 (654)
Q Consensus 501 ---~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 577 (654)
....+++.|+|||++. +.++.++||||+||++|||++|..||..... ...+..+....... ....
T Consensus 193 ~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~~~~~i~~~~~~~-----~~~~ 260 (494)
T 3lij_A 193 KKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTD------QEILRKVEKGKYTF-----DSPE 260 (494)
T ss_dssp BCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHTCCCC-----CSGG
T ss_pred ccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHhCCCCC-----Cchh
Confidence 3356788899999986 5699999999999999999999999975322 22222222211110 0001
Q ss_pred cCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 036334 578 YHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRM 612 (654)
Q Consensus 578 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 612 (654)
+... ...+.+++.+||+.||++|||+.|+++.
T Consensus 261 ~~~~---s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 261 WKNV---SEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp GTTS---CHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred cccC---CHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 1112 2346677889999999999999999864
No 200
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.1e-38 Score=333.57 Aligned_cols=249 Identities=22% Similarity=0.327 Sum_probs=186.5
Q ss_pred hhccccccCceeEEEEEec-CCcEEEEEEecccccC---HHHHHHHHHHHhccCCCccccccEEEEeCC------ceEEE
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAVG---KREFEMQMEVLGKIKHDNVVPLRAFYYSKD------EKLLV 419 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~e~~~l~~l~hpniv~l~~~~~~~~------~~~lv 419 (654)
..+.||+|+||.||+|... +|+.||||++...... .+++.+|++++++++||||+++++++...+ ..++|
T Consensus 29 ~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv 108 (367)
T 1cm8_A 29 DLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLV 108 (367)
T ss_dssp EEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEE
T ss_pred EeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEEEE
Confidence 3578999999999999964 6899999998654322 456789999999999999999999997653 45999
Q ss_pred EEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCC
Q 036334 420 YDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN 499 (654)
Q Consensus 420 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~ 499 (654)
|||+ +++|.+++.. ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 109 ~e~~-~~~L~~~~~~------~~l~~~~~~~~~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 180 (367)
T 1cm8_A 109 MPFM-GTDLGKLMKH------EKLGEDRIQFLVYQMLKGLRYIHAAG-IIHRDLKPGNLAVNEDCELKILDFGLARQADS 180 (367)
T ss_dssp EECC-SEEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCcCHHHEEEcCCCCEEEEeeeccccccc
Confidence 9999 8899999973 35899999999999999999999998 99999999999999999999999999987654
Q ss_pred C-CCCCccccccCccccCC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhc------hhhhhh
Q 036334 500 T-TPPTRVAGYRAPEVVET-RKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREE------WTAEVF 571 (654)
Q Consensus 500 ~-~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 571 (654)
. ....++..|+|||++.+ ..++.++||||+||++|||++|+.||..... ...+..+.... ....+.
T Consensus 181 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~------~~~l~~i~~~~g~~~~~~~~~~~ 254 (367)
T 1cm8_A 181 EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDH------LDQLKEIMKVTGTPPAEFVQRLQ 254 (367)
T ss_dssp SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHHHCCCCHHHHHTCS
T ss_pred ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHHhcCCCCHHHHHHhh
Confidence 3 33466788999999876 6899999999999999999999999975432 11111111100 000000
Q ss_pred h-------Hhhhc------cCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 036334 572 D-------VELMR------YHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRM 612 (654)
Q Consensus 572 ~-------~~~~~------~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 612 (654)
. ..+.. ..........+.+++.+||..||++|||++|+++.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 255 SDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp CHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred hHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 0 00000 00001123456778889999999999999999873
No 201
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=1e-38 Score=351.26 Aligned_cols=244 Identities=26% Similarity=0.361 Sum_probs=197.3
Q ss_pred HHhhccccccCceeEEEEEec-CCcEEEEEEeccc----ccCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEe
Q 036334 348 RASAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEV----AVGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDY 422 (654)
Q Consensus 348 ~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~----~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 422 (654)
|...++||+|+||.||+|... +|+.||||++... ......+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 28 y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 107 (484)
T 3nyv_A 28 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEV 107 (484)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred eEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEec
Confidence 345688999999999999965 6899999998654 23467789999999999999999999999999999999999
Q ss_pred cCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEE---CCCCCeEEeccCCCCCcCC
Q 036334 423 MPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILL---RPDHDACVSDFGLNPLFGN 499 (654)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll---~~~~~~kl~Dfgla~~~~~ 499 (654)
+.+|+|.+++.. ...+++..++.++.|++.||+|||+++ |+||||||+|||+ +.++.+||+|||++.....
T Consensus 108 ~~~~~L~~~~~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 181 (484)
T 3nyv_A 108 YTGGELFDEIIS-----RKRFSEVDAARIIRQVLSGITYMHKNK-IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 181 (484)
T ss_dssp CCSCBHHHHHHT-----CSCCBHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCC
T ss_pred CCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccc
Confidence 999999999873 345999999999999999999999998 9999999999999 5678999999999877654
Q ss_pred CC---CCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhh
Q 036334 500 TT---PPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELM 576 (654)
Q Consensus 500 ~~---~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 576 (654)
.. ...+++.|+|||++.+ .++.++||||+||++|||++|+.||..... ...+..+........ ..
T Consensus 182 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~~~~~i~~~~~~~~-----~~ 249 (484)
T 3nyv_A 182 SKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANE------YDILKKVEKGKYTFE-----LP 249 (484)
T ss_dssp CCSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHCCCCCC-----SG
T ss_pred ccccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCH------HHHHHHHHcCCCCCC-----Cc
Confidence 42 2356788999999865 699999999999999999999999975322 222222222211110 00
Q ss_pred ccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 036334 577 RYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRM 612 (654)
Q Consensus 577 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 612 (654)
.+. .....+.+++.+||+.||++|||+.|+++.
T Consensus 250 ~~~---~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 250 QWK---KVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp GGG---GSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ccc---cCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 111 122356678889999999999999999874
No 202
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=2.9e-38 Score=332.34 Aligned_cols=252 Identities=16% Similarity=0.236 Sum_probs=196.3
Q ss_pred hhccccccCceeEEEEEecCCcEEEEEEecccccCH------------------HHHHHHHHHHhccCCCccccccEEEE
Q 036334 350 SAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGK------------------REFEMQMEVLGKIKHDNVVPLRAFYY 411 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~------------------~~~~~e~~~l~~l~hpniv~l~~~~~ 411 (654)
+.+.||+|+||.||+|.. +|+.||||++....... +.+.+|++++++++||||+++++++.
T Consensus 35 ~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 113 (348)
T 2pml_X 35 IIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIIT 113 (348)
T ss_dssp EEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSEEEE
T ss_pred EEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEEEEe
Confidence 457899999999999999 79999999997542211 78999999999999999999999999
Q ss_pred eCCceEEEEEecCCCchhhh------hccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhc-cCCeecCCCCCCcEEECCCC
Q 036334 412 SKDEKLLVYDYMPAGSLSAL------LHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV-SGKIVHGNIKASNILLRPDH 484 (654)
Q Consensus 412 ~~~~~~lv~e~~~~g~L~~~------l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~-~~~ivHrDlk~~NIll~~~~ 484 (654)
+.+..++||||+++|+|.++ +... ....+++..++.++.|++.||+|||+ .+ |+||||||+||+++.++
T Consensus 114 ~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~~~-i~H~dl~p~Nil~~~~~ 189 (348)
T 2pml_X 114 NYDEVYIIYEYMENDSILKFDEYFFVLDKN---YTCFIPIQVIKCIIKSVLNSFSYIHNEKN-ICHRDVKPSNILMDKNG 189 (348)
T ss_dssp SSSEEEEEEECCTTCBSSEESSSEESSCSS---SCCCCCHHHHHHHHHHHHHHHHHHHHTSC-EECCCCCGGGEEECTTS
T ss_pred eCCeEEEEEeccCCCcHHHHHHHhhhhhhc---cccCCCHHHHHHHHHHHHHHHHHHhccCC-EeecCCChHhEEEcCCC
Confidence 99999999999999999999 5422 24569999999999999999999998 77 99999999999999999
Q ss_pred CeEEeccCCCCCcCCC--CCCCccccccCccccCCC-CCCc-chhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHH
Q 036334 485 DACVSDFGLNPLFGNT--TPPTRVAGYRAPEVVETR-KVTF-KSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQS 560 (654)
Q Consensus 485 ~~kl~Dfgla~~~~~~--~~~~~~~~y~aPE~~~~~-~~~~-~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~ 560 (654)
.+||+|||++...... ....++..|+|||++.+. .++. ++|||||||++|||++|+.||...... ......
T Consensus 190 ~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~~~ 264 (348)
T 2pml_X 190 RVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL-----VELFNN 264 (348)
T ss_dssp CEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS-----HHHHHH
T ss_pred cEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH-----HHHHHH
Confidence 9999999998765432 345677889999999877 6666 999999999999999999999754321 112222
Q ss_pred Hhhhchhhhh----hhHhhhc---cCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 036334 561 VVREEWTAEV----FDVELMR---YHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVR 611 (654)
Q Consensus 561 ~~~~~~~~~~----~~~~~~~---~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 611 (654)
+......... ....... .........++.+++.+||+.||++|||++|+++
T Consensus 265 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 265 IRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp HTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 2111110000 0000000 0000122345778888999999999999999976
No 203
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.6e-38 Score=339.95 Aligned_cols=194 Identities=24% Similarity=0.397 Sum_probs=152.9
Q ss_pred hccccccCceeEEEEEec---CCcEEEEEEecccccCHHHHHHHHHHHhccCCCccccccEEEEe--CCceEEEEEecCC
Q 036334 351 AEVLGKGSVGTSYKAVLE---EGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYS--KDEKLLVYDYMPA 425 (654)
Q Consensus 351 ~~~lg~G~fg~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~--~~~~~lv~e~~~~ 425 (654)
+++||+|+||+||+|... +++.||||++..... ...+.+|+.++++++||||+++++++.. ....++||||++
T Consensus 26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~- 103 (405)
T 3rgf_A 26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI-SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE- 103 (405)
T ss_dssp SCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC-CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCS-
T ss_pred CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC-CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCC-
Confidence 568999999999999965 478999999976533 3467899999999999999999999965 567899999996
Q ss_pred CchhhhhccCC----CCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEE----CCCCCeEEeccCCCCCc
Q 036334 426 GSLSALLHGSR----GSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILL----RPDHDACVSDFGLNPLF 497 (654)
Q Consensus 426 g~L~~~l~~~~----~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll----~~~~~~kl~Dfgla~~~ 497 (654)
|+|.+++...+ ......+++..++.++.||+.||+|||+++ |+||||||+|||+ +.++.+||+|||++...
T Consensus 104 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~ 182 (405)
T 3rgf_A 104 HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW-VLHRDLKPANILVMGEGPERGRVKIADMGFARLF 182 (405)
T ss_dssp EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECCSSTTTTCEEECCTTCCC--
T ss_pred CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC-EeCCCcCHHHeEEecCCCCCCcEEEEECCCceec
Confidence 58887775321 112235999999999999999999999998 9999999999999 67789999999999876
Q ss_pred CCC-------CCCCccccccCccccCC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 036334 498 GNT-------TPPTRVAGYRAPEVVET-RKVTFKSDVYSFGVLLLELLTGKAPNQASL 547 (654)
Q Consensus 498 ~~~-------~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~tg~~pf~~~~ 547 (654)
... ....++..|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 183 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~ 240 (405)
T 3rgf_A 183 NSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 240 (405)
T ss_dssp --------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC
T ss_pred CCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCcc
Confidence 432 23456788999999977 458999999999999999999999997644
No 204
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=9.3e-38 Score=322.08 Aligned_cols=240 Identities=22% Similarity=0.350 Sum_probs=188.7
Q ss_pred hhccccccCceeEEEEEec-CCcEEEEEEecccc-----cCHHHHHHHHHHHhccCCCccccccEEEE--eCCceEEEEE
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVA-----VGKREFEMQMEVLGKIKHDNVVPLRAFYY--SKDEKLLVYD 421 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~-----~~~~~~~~e~~~l~~l~hpniv~l~~~~~--~~~~~~lv~e 421 (654)
+.+.||+|+||.||++... +++.||+|+++... .....+.+|++++++++||||+++++++. +....++|||
T Consensus 9 i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e 88 (305)
T 2wtk_C 9 MGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVME 88 (305)
T ss_dssp CCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEEEE
T ss_pred EeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEEeh
Confidence 3578999999999999964 58899999997642 23467899999999999999999999984 4457899999
Q ss_pred ecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC-
Q 036334 422 YMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT- 500 (654)
Q Consensus 422 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~- 500 (654)
|++++ |.+++.... ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++......
T Consensus 89 ~~~~~-l~~~~~~~~---~~~~~~~~~~~~~~qi~~al~~LH~~~-i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~ 163 (305)
T 2wtk_C 89 YCVCG-MQEMLDSVP---EKRFPVCQAHGYFCQLIDGLEYLHSQG-IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFA 163 (305)
T ss_dssp CCSEE-HHHHHHHST---TCSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECCTTC
T ss_pred hccCC-HHHHHHhCc---ccccCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCcccEEEcCCCcEEeeccccccccCccc
Confidence 99876 767665432 346899999999999999999999998 999999999999999999999999998765422
Q ss_pred -----CCCCccccccCccccCCCC--CCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhH
Q 036334 501 -----TPPTRVAGYRAPEVVETRK--VTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDV 573 (654)
Q Consensus 501 -----~~~~~~~~y~aPE~~~~~~--~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 573 (654)
....++..|+|||++.+.. ++.++||||||+++|||++|+.||.... .......+.....
T Consensus 164 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~i~~~~~------- 230 (305)
T 2wtk_C 164 ADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN------IYKLFENIGKGSY------- 230 (305)
T ss_dssp SSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHCCC-------
T ss_pred cccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch------HHHHHHHHhcCCC-------
Confidence 2345677899999987643 4789999999999999999999997532 2222222211110
Q ss_pred hhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 036334 574 ELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRM 612 (654)
Q Consensus 574 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 612 (654)
.........+.+++.+||+.||++|||++|+++.
T Consensus 231 -----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 231 -----AIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp -----CCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred -----CCCCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0111123356778889999999999999999975
No 205
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=6.2e-38 Score=339.61 Aligned_cols=188 Identities=26% Similarity=0.379 Sum_probs=160.1
Q ss_pred hhccccccCceeEEEEEec-CCcEEEEEEeccccc---CHHHHHHHHHHHhccCCCccccccEEEEeC-----CceEEEE
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAV---GKREFEMQMEVLGKIKHDNVVPLRAFYYSK-----DEKLLVY 420 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~e~~~l~~l~hpniv~l~~~~~~~-----~~~~lv~ 420 (654)
+.+.||+|+||.||+|... +|+.||||+++.... ..+++.+|++++++++||||+++++++... ...|+||
T Consensus 30 ~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~ 109 (432)
T 3n9x_A 30 IKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVL 109 (432)
T ss_dssp EEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEE
T ss_pred EEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEEEE
Confidence 4578999999999999965 588999999976432 346788999999999999999999998776 5689999
Q ss_pred EecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC
Q 036334 421 DYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT 500 (654)
Q Consensus 421 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~ 500 (654)
||++ |+|.+++.. ...+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 110 e~~~-~~L~~~~~~-----~~~l~~~~~~~i~~qil~aL~~LH~~g-ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~ 182 (432)
T 3n9x_A 110 EIAD-SDLKKLFKT-----PIFLTEEHIKTILYNLLLGENFIHESG-IIHRDLKPANCLLNQDCSVKVCDFGLARTINSE 182 (432)
T ss_dssp ECCS-EEHHHHHHS-----SCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEEC---
T ss_pred ecCC-cCHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCHHHeEECCCCCEEEccCCCccccccc
Confidence 9996 599999973 345999999999999999999999998 999999999999999999999999999765432
Q ss_pred --------------------------CCCCccccccCcccc-CCCCCCcchhHHHHHHHHHHHHhCCCCCC
Q 036334 501 --------------------------TPPTRVAGYRAPEVV-ETRKVTFKSDVYSFGVLLLELLTGKAPNQ 544 (654)
Q Consensus 501 --------------------------~~~~~~~~y~aPE~~-~~~~~~~~~DvwslGvil~el~tg~~pf~ 544 (654)
....+|..|+|||++ ....++.++||||+||++|||++|..||.
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 183 KDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp ----------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 234567789999986 56679999999999999999998655554
No 206
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=3e-39 Score=337.31 Aligned_cols=249 Identities=18% Similarity=0.253 Sum_probs=184.8
Q ss_pred hhccccccCceeEEEEEec-CCcEEEEEEecccccC---HHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCC
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAVG---KREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPA 425 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~ 425 (654)
+.+.||+|+||+||+|... +|+.||||+++..... .+.+.+|++++++++||||+++++++.+++..++||||++
T Consensus 38 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~- 116 (329)
T 3gbz_A 38 RITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAE- 116 (329)
T ss_dssp EEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEECCS-
T ss_pred EEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEecCC-
Confidence 4578999999999999854 6899999999755322 3457789999999999999999999999999999999997
Q ss_pred CchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEEC-----CCCCeEEeccCCCCCcCCC
Q 036334 426 GSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLR-----PDHDACVSDFGLNPLFGNT 500 (654)
Q Consensus 426 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~-----~~~~~kl~Dfgla~~~~~~ 500 (654)
|+|.+++... ..+++..++.++.|++.||+|||+++ |+||||||+|||++ .++.+||+|||++......
T Consensus 117 ~~L~~~~~~~-----~~~~~~~~~~i~~ql~~~l~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~ 190 (329)
T 3gbz_A 117 NDLKKYMDKN-----PDVSMRVIKSFLYQLINGVNFCHSRR-CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIP 190 (329)
T ss_dssp EEHHHHHHHC-----TTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC--
T ss_pred CCHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC-EECCCCCHHHEEEecCCCCccceEEECcCCCccccCCc
Confidence 5999999743 35899999999999999999999998 99999999999994 4455999999998765422
Q ss_pred ----CCCCccccccCccccCCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhch------hhh
Q 036334 501 ----TPPTRVAGYRAPEVVETR-KVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEW------TAE 569 (654)
Q Consensus 501 ----~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~------~~~ 569 (654)
....++..|+|||++.+. .++.++|||||||++|||++|+.||...... ..+..+..... ...
T Consensus 191 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~------~~~~~~~~~~~~~~~~~~~~ 264 (329)
T 3gbz_A 191 IRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEI------DQLFKIFEVLGLPDDTTWPG 264 (329)
T ss_dssp ---------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHHHCCCCTTTSTT
T ss_pred ccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHH------HHHHHHHHHhCCCchhhhhh
Confidence 234557889999999774 5899999999999999999999999753221 11111111000 000
Q ss_pred hh-----hHhhh--ccCChHH-----HHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 036334 570 VF-----DVELM--RYHNIEE-----EMVQLLQIAMGCVSTVPDQRPAMQEVVR 611 (654)
Q Consensus 570 ~~-----~~~~~--~~~~~~~-----~~~~l~~l~~~cl~~dP~~RPs~~evl~ 611 (654)
.. ..... ....... ...++.+++.+||+.||++|||++|+++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 265 VTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp GGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 00 00000 0000000 1245678888999999999999999986
No 207
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.9e-38 Score=333.63 Aligned_cols=253 Identities=23% Similarity=0.326 Sum_probs=191.5
Q ss_pred HHhhccccccCceeEEEEEec-CCcEEEEEEecccccC------HHHHHHHHHHHhccCCCccccccEEEEeCCceEEEE
Q 036334 348 RASAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAVG------KREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVY 420 (654)
Q Consensus 348 ~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~------~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 420 (654)
|...+.||+|+||.||+|... +|+.||||+++..... .+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 12 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 91 (346)
T 1ua2_A 12 YEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVF 91 (346)
T ss_dssp -CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEE
T ss_pred cEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEEEE
Confidence 345678999999999999965 5899999999754221 246789999999999999999999999999999999
Q ss_pred EecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC
Q 036334 421 DYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT 500 (654)
Q Consensus 421 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~ 500 (654)
||+++ +|.+++... ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++......
T Consensus 92 e~~~~-~l~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~ 165 (346)
T 1ua2_A 92 DFMET-DLEVIIKDN----SLVLTPSHIKAYMLMTLQGLEYLHQHW-ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP 165 (346)
T ss_dssp ECCSE-EHHHHHTTC----CSSCCSSHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCCGGGSTTTSC
T ss_pred EcCCC-CHHHHHHhc----CcCCCHHHHHHHHHHHHHHHHHHHHCC-EECCCCCHHHEEEcCCCCEEEEecccceeccCC
Confidence 99976 888888643 345888999999999999999999998 999999999999999999999999999876432
Q ss_pred ----CCCCccccccCccccCC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhh-------chhh
Q 036334 501 ----TPPTRVAGYRAPEVVET-RKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVRE-------EWTA 568 (654)
Q Consensus 501 ----~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~-------~~~~ 568 (654)
....++..|+|||++.+ ..++.++|||||||++|||++|..||..... ...+..+... .|..
T Consensus 166 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~------~~~~~~i~~~~~~~~~~~~~~ 239 (346)
T 1ua2_A 166 NRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSD------LDQLTRIFETLGTPTEEQWPD 239 (346)
T ss_dssp CCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHHHCCCCTTTSSS
T ss_pred cccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCH------HHHHHHHHHHcCCCChhhhhh
Confidence 23456788999999865 4589999999999999999999999875422 1112221111 0000
Q ss_pred hhhhHhhhc---c-CCh-----HHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 036334 569 EVFDVELMR---Y-HNI-----EEEMVQLLQIAMGCVSTVPDQRPAMQEVVRM 612 (654)
Q Consensus 569 ~~~~~~~~~---~-~~~-----~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 612 (654)
......... . ... .....++.+++.+||+.||++|||++|+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 240 MCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp TTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred hccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 000000000 0 000 1122467788889999999999999999875
No 208
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=8.9e-39 Score=331.93 Aligned_cols=247 Identities=19% Similarity=0.327 Sum_probs=190.5
Q ss_pred hhccccccCceeEEEEEecCCcEEEEEEecccc---cCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCCC
Q 036334 350 SAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVA---VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAG 426 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~---~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g 426 (654)
+.+.||+|+||.||+|...+ .||+|+++... ...+.+.+|+.++++++||||+++++++.+.+..++||||++++
T Consensus 37 ~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~~~ 114 (319)
T 2y4i_B 37 IGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGR 114 (319)
T ss_dssp CCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCCCSE
T ss_pred EeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeecccCC
Confidence 35789999999999998763 49999987542 22355778999999999999999999999999999999999999
Q ss_pred chhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCC-------
Q 036334 427 SLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN------- 499 (654)
Q Consensus 427 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~------- 499 (654)
+|.+++... ...+++..++.++.|++.||+|||+++ |+||||||+||+++ ++.+||+|||++.....
T Consensus 115 ~L~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH~~~-i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~~ 188 (319)
T 2y4i_B 115 TLYSVVRDA----KIVLDVNKTRQIAQEIVKGMGYLHAKG-ILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRRE 188 (319)
T ss_dssp EHHHHTTSS----CCCCCSHHHHHHHHHHHHHHHHHHHTT-CCCCCCCSTTEEEC---CCEECCCSCCC----------C
T ss_pred cHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccCCChhhEEEe-CCCEEEeecCCccccccccccccc
Confidence 999999743 245899999999999999999999998 99999999999998 68999999999775431
Q ss_pred --CCCCCccccccCccccCC---------CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhh
Q 036334 500 --TTPPTRVAGYRAPEVVET---------RKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTA 568 (654)
Q Consensus 500 --~~~~~~~~~y~aPE~~~~---------~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (654)
.....++..|+|||++.+ ..++.++|||||||++|||++|+.||..... ......+... ...
T Consensus 189 ~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~------~~~~~~~~~~-~~~ 261 (319)
T 2y4i_B 189 DKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPA------EAIIWQMGTG-MKP 261 (319)
T ss_dssp CSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCH------HHHHHHHHTT-CCC
T ss_pred cccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHhccC-CCC
Confidence 122346778999999864 4578999999999999999999999975321 1111111111 000
Q ss_pred hhhhHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCC
Q 036334 569 EVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGE 620 (654)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 620 (654)
... . .....++.+++.+||..||++|||+.+++++|+++....
T Consensus 262 ~~~-----~----~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~ 304 (319)
T 2y4i_B 262 NLS-----Q----IGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN 304 (319)
T ss_dssp CCC-----C----SSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred CCC-----c----CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence 000 0 011235677888999999999999999999999998664
No 209
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=5.2e-38 Score=326.85 Aligned_cols=244 Identities=23% Similarity=0.351 Sum_probs=188.9
Q ss_pred HHhhccccccCceeEEEEEec-CCcEEEEEEeccccc---------CHHHHHHHHHHHhccCCCccccccEEEEeCCceE
Q 036334 348 RASAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAV---------GKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKL 417 (654)
Q Consensus 348 ~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~---------~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~ 417 (654)
|.+.+.||+|+||.||+|... +++.||||++..... ....+.+|++++++++||||+++++++..+ ..+
T Consensus 12 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~ 90 (322)
T 2ycf_A 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE-DYY 90 (322)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS-SEE
T ss_pred eeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC-ceE
Confidence 345688999999999999865 578999999865421 123578899999999999999999998665 489
Q ss_pred EEEEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCC---eEEeccCCC
Q 036334 418 LVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHD---ACVSDFGLN 494 (654)
Q Consensus 418 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~---~kl~Dfgla 494 (654)
+||||+++|+|.+++.. ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++. +||+|||++
T Consensus 91 lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~ 164 (322)
T 2ycf_A 91 IVLELMEGGELFDKVVG-----NKRLKEATCKLYFYQMLLAVQYLHENG-IIHRDLKPENVLLSSQEEDCLIKITDFGHS 164 (322)
T ss_dssp EEEECCTTEETHHHHST-----TCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESSSSSSCCEEECCCTTC
T ss_pred EEEecCCCCcHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEEecCCCCCeEEEccCccc
Confidence 99999999999999873 346899999999999999999999998 999999999999987665 999999999
Q ss_pred CCcCCCC---CCCccccccCccccC---CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhh
Q 036334 495 PLFGNTT---PPTRVAGYRAPEVVE---TRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTA 568 (654)
Q Consensus 495 ~~~~~~~---~~~~~~~y~aPE~~~---~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (654)
....... ...++..|+|||++. ...++.++|||||||++|||++|+.||....... .+...+. .....
T Consensus 165 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~~~----~~~~~ 238 (322)
T 2ycf_A 165 KILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV--SLKDQIT----SGKYN 238 (322)
T ss_dssp EECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS--CHHHHHH----HTCCC
T ss_pred eecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH--HHHHHHH----hCccc
Confidence 8765432 234677899999973 5678999999999999999999999997543322 1211111 11000
Q ss_pred hhhhHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 036334 569 EVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVR 611 (654)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 611 (654)
..+.. . ......+.+++.+||+.||++|||++|+++
T Consensus 239 --~~~~~--~---~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 239 --FIPEV--W---AEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp --CCHHH--H---TTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred --cCchh--h---hhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 00000 0 112245778888999999999999999974
No 210
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.1e-38 Score=330.31 Aligned_cols=242 Identities=24% Similarity=0.407 Sum_probs=189.6
Q ss_pred hhccccccCceeEEEEEec-CCcEEEEEEecccccCHHHHHHHHHHHhcc-CCCccccccEEEEe------CCceEEEEE
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAVGKREFEMQMEVLGKI-KHDNVVPLRAFYYS------KDEKLLVYD 421 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~e~~~l~~l-~hpniv~l~~~~~~------~~~~~lv~e 421 (654)
+.+.||+|+||.||+|... +|+.||||++.........+.+|+.+++++ +||||+++++++.. .+..++|||
T Consensus 28 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e 107 (326)
T 2x7f_A 28 LVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVME 107 (326)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEEE
T ss_pred EEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEEEE
Confidence 3578999999999999964 689999999987666678899999999999 79999999999987 457899999
Q ss_pred ecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC-
Q 036334 422 YMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT- 500 (654)
Q Consensus 422 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~- 500 (654)
|+++|+|.+++.... ...+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 108 ~~~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 183 (326)
T 2x7f_A 108 FCGAGSVTDLIKNTK---GNTLKEEWIAYICREILRGLSHLHQHK-VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV 183 (326)
T ss_dssp CCTTEEHHHHHHHSG---GGCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEECTTCCEEECCCTTTC------
T ss_pred cCCCCcHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCcHHHEEEcCCCCEEEeeCcCceecCcCc
Confidence 999999999997542 245899999999999999999999998 999999999999999999999999998876432
Q ss_pred ---CCCCccccccCccccC-----CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhh
Q 036334 501 ---TPPTRVAGYRAPEVVE-----TRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFD 572 (654)
Q Consensus 501 ---~~~~~~~~y~aPE~~~-----~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 572 (654)
....++..|+|||++. +..++.++|||||||++|||++|+.||..... ............ .
T Consensus 184 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~~-~---- 252 (326)
T 2x7f_A 184 GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP------MRALFLIPRNPA-P---- 252 (326)
T ss_dssp -------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHHHSCC-C----
T ss_pred cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcH------HHHHHHhhcCcc-c----
Confidence 2345677899999986 56789999999999999999999999964321 111111111100 0
Q ss_pred HhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 036334 573 VELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVR 611 (654)
Q Consensus 573 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 611 (654)
.. . .......+.+++.+||..||++||+++++++
T Consensus 253 -~~-~---~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 253 -RL-K---SKKWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp -CC-S---CSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred -cC-C---ccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 00 0 0111235677888999999999999999976
No 211
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=1.4e-38 Score=327.81 Aligned_cols=242 Identities=21% Similarity=0.352 Sum_probs=190.4
Q ss_pred hhccccccCceeEEEEEec-CCcEEEEEEeccc-ccCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCCCc
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEV-AVGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAGS 427 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~-~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g~ 427 (654)
+.+.||+|+||.||+|... +|+.||+|++... ....+.+.+|++++++++||||+++++++.+++..++||||+++++
T Consensus 23 i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 102 (302)
T 2j7t_A 23 IVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGA 102 (302)
T ss_dssp EEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCTTEE
T ss_pred ecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCCCCc
Confidence 4578999999999999976 4889999998755 3445788999999999999999999999999999999999999999
Q ss_pred hhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcC----CCCCC
Q 036334 428 LSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFG----NTTPP 503 (654)
Q Consensus 428 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~----~~~~~ 503 (654)
|.+++... ...+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++.... .....
T Consensus 103 l~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 177 (302)
T 2j7t_A 103 VDAIMLEL----DRGLTEPQIQVVCRQMLEALNFLHSKR-IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSF 177 (302)
T ss_dssp HHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC----
T ss_pred HHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHhcCC-cccCCCCHHHEEECCCCCEEEEECCCCccccccccccccc
Confidence 99988642 245899999999999999999999998 9999999999999999999999999864321 22334
Q ss_pred CccccccCcccc-----CCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhcc
Q 036334 504 TRVAGYRAPEVV-----ETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRY 578 (654)
Q Consensus 504 ~~~~~y~aPE~~-----~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 578 (654)
.++..|+|||++ .+..++.++||||||+++|||++|+.||..... .............. .
T Consensus 178 ~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~~~~---------~ 242 (302)
T 2j7t_A 178 IGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP------MRVLLKIAKSDPPT---------L 242 (302)
T ss_dssp -CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHHHSCCCC---------C
T ss_pred cCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCH------HHHHHHHhccCCcc---------c
Confidence 577889999998 467789999999999999999999999975321 12222221111100 0
Q ss_pred CChHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 036334 579 HNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVR 611 (654)
Q Consensus 579 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 611 (654)
.........+.+++.+||+.||++|||+.++++
T Consensus 243 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 243 LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp SSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred CCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 011122345778888999999999999999975
No 212
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=7e-39 Score=329.96 Aligned_cols=253 Identities=25% Similarity=0.386 Sum_probs=178.6
Q ss_pred hhccccccCceeEEEEEec-CCcEEEEEEecccc--cCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCCC
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVA--VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAG 426 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g 426 (654)
+.+.||+|+||.||+|... +++.||||++.... ...+++.+|+.++++++||||+++++++...+..++||||++++
T Consensus 19 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 98 (303)
T 2vwi_A 19 LQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGG 98 (303)
T ss_dssp EEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEECCTTC
T ss_pred hhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehhccCC
Confidence 3578999999999999854 68899999986542 33467888999999999999999999999999999999999999
Q ss_pred chhhhhccCC---CCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC---
Q 036334 427 SLSALLHGSR---GSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT--- 500 (654)
Q Consensus 427 ~L~~~l~~~~---~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~--- 500 (654)
+|.+++.... ......+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++......
T Consensus 99 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 177 (303)
T 2vwi_A 99 SVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG-QIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDI 177 (303)
T ss_dssp BHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEECTTCCEEECCCHHHHHCC-----
T ss_pred chHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC-CCCCCCChhhEEEcCCCCEEEEeccchheeccCCCc
Confidence 9999986321 112345899999999999999999999998 999999999999999999999999987654321
Q ss_pred ------CCCCccccccCccccCC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhH
Q 036334 501 ------TPPTRVAGYRAPEVVET-RKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDV 573 (654)
Q Consensus 501 ------~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 573 (654)
....++..|+|||++.+ ..++.++||||||+++|||++|+.||......+ .......... ... ..
T Consensus 178 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~------~~~~~~~~~~-~~~-~~ 249 (303)
T 2vwi_A 178 TRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMK------VLMLTLQNDP-PSL-ET 249 (303)
T ss_dssp ----------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGG------HHHHHHTSSC-CCT-TC
T ss_pred cchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhh------HHHHHhccCC-Ccc-cc
Confidence 22356778999999865 568999999999999999999999997543211 1111111110 000 00
Q ss_pred hhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 036334 574 ELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVR 611 (654)
Q Consensus 574 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 611 (654)
.............++.+++.+||+.||++|||+.|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 250 GVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp -----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 00000001112235677888999999999999999986
No 213
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=8.1e-38 Score=330.87 Aligned_cols=250 Identities=22% Similarity=0.303 Sum_probs=185.5
Q ss_pred hccccccCceeEEEEEecCCcEEEEEEecccccC------------HHHHHHHHHHHhccCCCccccccEEEEeC-----
Q 036334 351 AEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVG------------KREFEMQMEVLGKIKHDNVVPLRAFYYSK----- 413 (654)
Q Consensus 351 ~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~------------~~~~~~e~~~l~~l~hpniv~l~~~~~~~----- 413 (654)
.+.||+|+||.||+|...+|+.||||++...... .+.+.+|++++++++||||+++++++...
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 106 (362)
T 3pg1_A 27 QRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAM 106 (362)
T ss_dssp EEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECCTTTC
T ss_pred eEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEeccCCCc
Confidence 5789999999999999888999999998654221 26788999999999999999999998653
Q ss_pred CceEEEEEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCC
Q 036334 414 DEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGL 493 (654)
Q Consensus 414 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgl 493 (654)
...++||||++ |+|.+++... ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+
T Consensus 107 ~~~~lv~e~~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 180 (362)
T 3pg1_A 107 HKLYLVTELMR-TDLAQVIHDQ----RIVISPQHIQYFMYHILLGLHVLHEAG-VVHRDLHPGNILLADNNDITICDFNL 180 (362)
T ss_dssp CEEEEEEECCS-EEHHHHHHCT----TSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCTTC
T ss_pred ceEEEEEccCC-CCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHHCc-CEecCCChHHEEEcCCCCEEEEecCc
Confidence 35799999997 6888888743 346999999999999999999999998 99999999999999999999999999
Q ss_pred CCCcCCC---CCCCccccccCccccCC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhh---ch
Q 036334 494 NPLFGNT---TPPTRVAGYRAPEVVET-RKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVRE---EW 566 (654)
Q Consensus 494 a~~~~~~---~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~---~~ 566 (654)
+...... ....++..|+|||++.+ ..++.++|||||||++|||++|+.||..... ......+... ..
T Consensus 181 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~------~~~~~~i~~~~~~~~ 254 (362)
T 3pg1_A 181 AREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTF------YNQLNKIVEVVGTPK 254 (362)
T ss_dssp ---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSH------HHHHHHHHHHHCCCC
T ss_pred ccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCH------HHHHHHHHHHcCCCC
Confidence 9755432 23456777999999876 6789999999999999999999999975432 1111111110 00
Q ss_pred hhh-----------hhhHhhhcc--CC----hHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 036334 567 TAE-----------VFDVELMRY--HN----IEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRM 612 (654)
Q Consensus 567 ~~~-----------~~~~~~~~~--~~----~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 612 (654)
... ......... .. .......+.+++.+||+.||++|||++|+++.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 255 IEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp HHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 000 000000000 00 01112357788889999999999999999873
No 214
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=1.8e-38 Score=326.38 Aligned_cols=250 Identities=20% Similarity=0.315 Sum_probs=191.1
Q ss_pred hccccccCceeEEEEEec-CCcEEEEEEeccccc---CHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCCC
Q 036334 351 AEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAV---GKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAG 426 (654)
Q Consensus 351 ~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g 426 (654)
.+.||+|+||.||+|... +|+.||||+++.... ....+.+|+.++++++||||+++++++.+++..++||||++ |
T Consensus 8 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~ 86 (299)
T 2r3i_A 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-Q 86 (299)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCS-E
T ss_pred hhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEEccc-C
Confidence 478999999999999965 689999999875432 23678899999999999999999999999999999999997 6
Q ss_pred chhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC----CC
Q 036334 427 SLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT----TP 502 (654)
Q Consensus 427 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~----~~ 502 (654)
+|.+++.... ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++...... ..
T Consensus 87 ~L~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 162 (299)
T 2r3i_A 87 DLKKFMDASA---LTGIPLPLIKSYLFQLLQGLAFCHSHR-VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 162 (299)
T ss_dssp EHHHHHHHTT---TTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSBCTTS
T ss_pred CHHHHHHhhh---ccCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCCCHHHeEEcCCCCEEECcchhhhhccCCccccCc
Confidence 9999987542 245899999999999999999999998 999999999999999999999999998665432 23
Q ss_pred CCccccccCccccCCCC-CCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhc-hh-----h-----hh
Q 036334 503 PTRVAGYRAPEVVETRK-VTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREE-WT-----A-----EV 570 (654)
Q Consensus 503 ~~~~~~y~aPE~~~~~~-~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~-~~-----~-----~~ 570 (654)
..++..|+|||++.+.. ++.++|||||||++|||++|+.||...... .....+.... .. . ..
T Consensus 163 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (299)
T 2r3i_A 163 EVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI------DQLFRIFRTLGTPDEVVWPGVTSMPD 236 (299)
T ss_dssp CBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH------HHHHHHHHHHCCCCTTTSTTGGGSTT
T ss_pred ccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHH------HHHHHHHHHhCCCchhhhhHhhcCcc
Confidence 45677899999997754 799999999999999999999999754321 1111111100 00 0 00
Q ss_pred hhHhhhcc--CC----hHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 036334 571 FDVELMRY--HN----IEEEMVQLLQIAMGCVSTVPDQRPAMQEVVR 611 (654)
Q Consensus 571 ~~~~~~~~--~~----~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 611 (654)
........ .. ......++.+++.+||+.||++|||+.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp CCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00000000 00 0011245677888999999999999999987
No 215
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=8e-39 Score=327.48 Aligned_cols=244 Identities=20% Similarity=0.310 Sum_probs=178.7
Q ss_pred hhccccccCceeEEEEEe-cCCcEEEEEEecccccCH---HHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCC
Q 036334 350 SAEVLGKGSVGTSYKAVL-EEGTTVVVKRLKEVAVGK---REFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPA 425 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~---~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~ 425 (654)
..+.||+|+||.||+|.. .+|+.||||+++...... +.+.++...++.++||||+++++++.+++..++||||++
T Consensus 11 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~- 89 (290)
T 3fme_A 11 PIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMD- 89 (290)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEECCS-
T ss_pred hHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEehhc-
Confidence 357899999999999996 468999999997653322 223344455888899999999999999999999999997
Q ss_pred CchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcc-CCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCCC---
Q 036334 426 GSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS-GKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTT--- 501 (654)
Q Consensus 426 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~--- 501 (654)
|+|.+++..... ....+++..++.++.|++.||+|||++ + |+||||||+||+++.++.+||+|||++.......
T Consensus 90 ~~l~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 167 (290)
T 3fme_A 90 TSLDKFYKQVID-KGQTIPEDILGKIAVSIVKALEHLHSKLS-VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKD 167 (290)
T ss_dssp EEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHHSC-CCCCCCSGGGCEECTTCCEEBCCC-------------
T ss_pred cchHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhcCC-eecCCCCHHHEEECCCCCEEEeecCCccccccccccc
Confidence 588777753211 235699999999999999999999998 7 9999999999999999999999999997764432
Q ss_pred CCCccccccCcccc----CCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhc
Q 036334 502 PPTRVAGYRAPEVV----ETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMR 577 (654)
Q Consensus 502 ~~~~~~~y~aPE~~----~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 577 (654)
...++..|+|||++ .+..++.++|||||||++|||++|+.||..... ....+..........
T Consensus 168 ~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~--------- 233 (290)
T 3fme_A 168 IDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT-----PFQQLKQVVEEPSPQ--------- 233 (290)
T ss_dssp --CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSC-----HHHHHHHHHHSCCCC---------
T ss_pred ccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCc-----hHHHHHHHhccCCCC---------
Confidence 23577889999996 566789999999999999999999999964211 111111111111100
Q ss_pred cCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 036334 578 YHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVR 611 (654)
Q Consensus 578 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 611 (654)
........++.+++.+||+.||++|||++|+++
T Consensus 234 -~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 234 -LPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp -CCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred -cccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 001112345778888999999999999999987
No 216
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=9.2e-39 Score=325.23 Aligned_cols=249 Identities=21% Similarity=0.283 Sum_probs=194.2
Q ss_pred hhccccccCceeEEEEEec-CCcEEEEEEeccccc---CHHHHHHHHHHHhccCCCccccccEEEEe--CCceEEEEEec
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAV---GKREFEMQMEVLGKIKHDNVVPLRAFYYS--KDEKLLVYDYM 423 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~e~~~l~~l~hpniv~l~~~~~~--~~~~~lv~e~~ 423 (654)
+.+.||+|+||.||++... +|+.||+|++..... ..+.+.+|++++++++||||+++++++.+ .+..++||||+
T Consensus 10 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~ 89 (279)
T 2w5a_A 10 VLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYC 89 (279)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEECC
T ss_pred eehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEeCC
Confidence 3578999999999999965 689999999975432 34568899999999999999999998864 56789999999
Q ss_pred CCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCC----eecCCCCCCcEEECCCCCeEEeccCCCCCcCC
Q 036334 424 PAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGK----IVHGNIKASNILLRPDHDACVSDFGLNPLFGN 499 (654)
Q Consensus 424 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~----ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~ 499 (654)
++|+|.+++..... ....+++..++.++.|++.||+|||+.+. |+||||||+||+++.++.+||+|||++.....
T Consensus 90 ~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~ 168 (279)
T 2w5a_A 90 EGGDLASVITKGTK-ERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH 168 (279)
T ss_dssp TTEEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHHHC--
T ss_pred CCCCHHHHHHhhcc-cCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchheeecc
Confidence 99999999974321 23458999999999999999999998752 99999999999999999999999999876644
Q ss_pred CC----CCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhh
Q 036334 500 TT----PPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVEL 575 (654)
Q Consensus 500 ~~----~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 575 (654)
.. ...++..|+|||++.+..++.++||||||+++|||++|+.||..... ......+.. ....
T Consensus 169 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~i~~-~~~~------- 234 (279)
T 2w5a_A 169 DTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ------KELAGKIRE-GKFR------- 234 (279)
T ss_dssp -CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHH-TCCC-------
T ss_pred ccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH------HHHHHHHhh-cccc-------
Confidence 32 12456779999999988999999999999999999999999975321 111111111 1110
Q ss_pred hccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhh
Q 036334 576 MRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENM 616 (654)
Q Consensus 576 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 616 (654)
........++.+++.+||+.||++|||++|+++.+...
T Consensus 235 ---~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~ 272 (279)
T 2w5a_A 235 ---RIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLIL 272 (279)
T ss_dssp ---CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCC
T ss_pred ---cCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhh
Confidence 00111234677888899999999999999999876543
No 217
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=7.5e-38 Score=332.23 Aligned_cols=248 Identities=21% Similarity=0.312 Sum_probs=184.8
Q ss_pred hhccccccCceeEEEEEec-CCcEEEEEEeccccc---CHHHHHHHHHHHhccCCCccccccEEEEeCC------ceEEE
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAV---GKREFEMQMEVLGKIKHDNVVPLRAFYYSKD------EKLLV 419 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~------~~~lv 419 (654)
..+.||+|+||.||+|... +|+.||||++..... ..+.+.+|+.+++.++||||+++++++...+ ..++|
T Consensus 29 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~lv 108 (371)
T 2xrw_A 29 NLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIV 108 (371)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEEEE
T ss_pred EeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceEEE
Confidence 3578999999999999854 588999999975432 2356788999999999999999999997655 67999
Q ss_pred EEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCC
Q 036334 420 YDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN 499 (654)
Q Consensus 420 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~ 499 (654)
|||++ |+|.+.+.. .+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++.....
T Consensus 109 ~e~~~-~~l~~~~~~-------~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~ 179 (371)
T 2xrw_A 109 MELMD-ANLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 179 (371)
T ss_dssp EECCS-EEHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECCCCC------
T ss_pred EEcCC-CCHHHHHhh-------ccCHHHHHHHHHHHHHHHHHHHHCC-eecccCCHHHEEEcCCCCEEEEEeeccccccc
Confidence 99996 478888752 3899999999999999999999998 99999999999999999999999999987654
Q ss_pred C---CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhc------hh---
Q 036334 500 T---TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREE------WT--- 567 (654)
Q Consensus 500 ~---~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~------~~--- 567 (654)
. ....++..|+|||++.+..++.++|||||||++|||++|+.||...... .....+.... ..
T Consensus 180 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------~~~~~i~~~~~~~~~~~~~~~ 253 (371)
T 2xrw_A 180 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI------DQWNKVIEQLGTPCPEFMKKL 253 (371)
T ss_dssp ----------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHC-CCCCCHHHHTTS
T ss_pred ccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHHHhCCCCHHHHHHh
Confidence 3 2345677899999999999999999999999999999999999764321 1111111000 00
Q ss_pred -------------------hhhhhHhhhccC--ChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 036334 568 -------------------AEVFDVELMRYH--NIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRM 612 (654)
Q Consensus 568 -------------------~~~~~~~~~~~~--~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 612 (654)
...+........ .......++.+++.+||..||++|||++|+++.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 254 QPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp CHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred hhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 000000000000 011224567889999999999999999999874
No 218
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=4.1e-38 Score=358.21 Aligned_cols=238 Identities=23% Similarity=0.285 Sum_probs=194.2
Q ss_pred hhccccccCceeEEEEEec-CCcEEEEEEeccc----ccCHHHHHHHHHHHhcc-CCCccccccEEEEeCCceEEEEEec
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEV----AVGKREFEMQMEVLGKI-KHDNVVPLRAFYYSKDEKLLVYDYM 423 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~----~~~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e~~ 423 (654)
+.++||+|+||+||+|... +++.||||++++. ....+.+..|..++..+ +||||+++++++.+.+..|+||||+
T Consensus 345 ~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E~~ 424 (674)
T 3pfq_A 345 FLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYV 424 (674)
T ss_dssp EEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEECC
T ss_pred EEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEeCc
Confidence 3578999999999999965 5789999999754 23345677889999887 7999999999999999999999999
Q ss_pred CCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCC----
Q 036334 424 PAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN---- 499 (654)
Q Consensus 424 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~---- 499 (654)
++|+|.+++... ..+++..++.++.||+.||+|||+++ |+||||||+|||++.++++||+|||++.....
T Consensus 425 ~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~g-IiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~ 498 (674)
T 3pfq_A 425 NGGDLMYHIQQV-----GRFKEPHAVFYAAEIAIGLFFLQSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT 498 (674)
T ss_dssp CSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTS-EECCCCCSTTEEECSSSCEEECCCTTCEECCCTTCC
T ss_pred CCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC-eEeccCChhhEEEcCCCcEEEeecceeeccccCCcc
Confidence 999999999743 35899999999999999999999998 99999999999999999999999999875322
Q ss_pred CCCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccC
Q 036334 500 TTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYH 579 (654)
Q Consensus 500 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 579 (654)
.....+|+.|+|||++.+..|+.++|||||||++|||++|+.||.... ....+..+...... ..
T Consensus 499 ~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~------~~~~~~~i~~~~~~---------~p- 562 (674)
T 3pfq_A 499 TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED------EDELFQSIMEHNVA---------YP- 562 (674)
T ss_dssp BCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHSSCCC---------CC-
T ss_pred cccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCC------HHHHHHHHHhCCCC---------CC-
Confidence 234567888999999999999999999999999999999999997532 22223333222110 11
Q ss_pred ChHHHHHHHHHHHhhccCCCCCCCCCH-----HHHHH
Q 036334 580 NIEEEMVQLLQIAMGCVSTVPDQRPAM-----QEVVR 611 (654)
Q Consensus 580 ~~~~~~~~l~~l~~~cl~~dP~~RPs~-----~evl~ 611 (654)
.....++.+|+.+||+.||++||++ +||++
T Consensus 563 --~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 563 --KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp --TTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred --ccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 1122356777889999999999997 55543
No 219
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=8e-38 Score=354.70 Aligned_cols=248 Identities=21% Similarity=0.325 Sum_probs=198.1
Q ss_pred HHhhccccccCceeEEEEEecC----CcEEEEEEeccccc--CHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEE
Q 036334 348 RASAEVLGKGSVGTSYKAVLEE----GTTVVVKRLKEVAV--GKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYD 421 (654)
Q Consensus 348 ~~~~~~lg~G~fg~Vy~~~~~~----g~~vavK~~~~~~~--~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 421 (654)
+.+.+.||+|+||.||+|.+.. +..||+|+++.... ..+.+.+|+.++++++||||+++++++. ++..++|||
T Consensus 392 y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~lv~E 470 (656)
T 2j0j_A 392 IELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIME 470 (656)
T ss_dssp EEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred EEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEEEEE
Confidence 3456789999999999998642 46799999875432 2367889999999999999999999984 567899999
Q ss_pred ecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCCC
Q 036334 422 YMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTT 501 (654)
Q Consensus 422 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 501 (654)
|+++|+|.+++... ...+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++.......
T Consensus 471 ~~~~g~L~~~l~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~ 545 (656)
T 2j0j_A 471 LCTLGELRSFLQVR----KFSLDLASLILYAYQLSTALAYLESKR-FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 545 (656)
T ss_dssp CCTTCBHHHHHHHT----TTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCCCCCCSCCC--
T ss_pred cCCCCcHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccccchHhEEEeCCCCEEEEecCCCeecCCCc
Confidence 99999999999743 235899999999999999999999998 9999999999999999999999999998765432
Q ss_pred -----CCCccccccCccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhh
Q 036334 502 -----PPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVEL 575 (654)
Q Consensus 502 -----~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 575 (654)
...++..|+|||++.+..++.++|||||||++|||++ |..||..... ...+..+.....
T Consensus 546 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~------~~~~~~i~~~~~--------- 610 (656)
T 2j0j_A 546 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN------NDVIGRIENGER--------- 610 (656)
T ss_dssp --------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH------HHHHHHHHHTCC---------
T ss_pred ceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCH------HHHHHHHHcCCC---------
Confidence 2334567999999988899999999999999999997 9999975321 122222211110
Q ss_pred hccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhc
Q 036334 576 MRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNR 618 (654)
Q Consensus 576 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 618 (654)
..........+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 611 --~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~ 651 (656)
T 2j0j_A 611 --LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 651 (656)
T ss_dssp --CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --CCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 01111223467788889999999999999999999999864
No 220
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=7.4e-38 Score=331.38 Aligned_cols=249 Identities=22% Similarity=0.309 Sum_probs=175.1
Q ss_pred hhccccccCceeEEEEEe-cCCcEEEEEEeccccc---CHHHHHHHHHHHhccCCCccccccEEEEeC------CceEEE
Q 036334 350 SAEVLGKGSVGTSYKAVL-EEGTTVVVKRLKEVAV---GKREFEMQMEVLGKIKHDNVVPLRAFYYSK------DEKLLV 419 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~-~~g~~vavK~~~~~~~---~~~~~~~e~~~l~~l~hpniv~l~~~~~~~------~~~~lv 419 (654)
..+.||+|+||.||+|.. .+|+.||||++..... ..+.+.+|+++++.++||||+++++++... ...++|
T Consensus 33 ~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~lv 112 (367)
T 2fst_X 33 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 112 (367)
T ss_dssp EEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEE
T ss_pred EeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEEEE
Confidence 357899999999999985 4689999999975432 345678999999999999999999998754 457999
Q ss_pred EEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCC
Q 036334 420 YDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN 499 (654)
Q Consensus 420 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~ 499 (654)
+||+ +++|.+++.. ..+++..++.++.||++||+|||+.+ |+||||||+|||++.++.+||+|||++.....
T Consensus 113 ~e~~-~~~L~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH~~g-ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~ 184 (367)
T 2fst_X 113 THLM-GADLNNIVKC------QKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTAD 184 (367)
T ss_dssp EECC-CEECC-----------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECC---------
T ss_pred eccc-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHhhEEECCCCCEEEeeccccccccc
Confidence 9999 7899998863 35999999999999999999999998 99999999999999999999999999987654
Q ss_pred C-CCCCccccccCccccCC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhh------chhhhhh
Q 036334 500 T-TPPTRVAGYRAPEVVET-RKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVRE------EWTAEVF 571 (654)
Q Consensus 500 ~-~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 571 (654)
. ....++..|+|||++.+ ..++.++|||||||++|||++|+.||..... ...+..+... .....+.
T Consensus 185 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~------~~~l~~i~~~~g~p~~~~~~~~~ 258 (367)
T 2fst_X 185 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH------IDQLKLILRLVGTPGAELLKKIS 258 (367)
T ss_dssp ------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSH------HHHHHHHHHHHCSCCHHHHTTCC
T ss_pred cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHHHhCCCCHHHHHHhh
Confidence 3 33467788999999876 6789999999999999999999999976432 1111111110 0000000
Q ss_pred h-------Hhhhc--cCChH----HHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 036334 572 D-------VELMR--YHNIE----EEMVQLLQIAMGCVSTVPDQRPAMQEVVRM 612 (654)
Q Consensus 572 ~-------~~~~~--~~~~~----~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 612 (654)
. ..+.. ..... .....+.+|+.+||..||++|||++|+++.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 259 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp CHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 0 00000 00000 112346778889999999999999999874
No 221
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=4.7e-38 Score=331.27 Aligned_cols=254 Identities=21% Similarity=0.286 Sum_probs=194.6
Q ss_pred hhccccccCceeEEEEEec-CC-cEEEEEEecccccCHHHHHHHHHHHhccCCCc------cccccEEEEeCCceEEEEE
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EG-TTVVVKRLKEVAVGKREFEMQMEVLGKIKHDN------VVPLRAFYYSKDEKLLVYD 421 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g-~~vavK~~~~~~~~~~~~~~e~~~l~~l~hpn------iv~l~~~~~~~~~~~lv~e 421 (654)
+.+.||+|+||+||+|... ++ +.||+|+++......+.+.+|+.++++++|++ ++.+++++...+..++|||
T Consensus 23 ~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~lv~e 102 (355)
T 2eu9_A 23 IVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFE 102 (355)
T ss_dssp EEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEEEEEE
T ss_pred EEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEEEEEe
Confidence 4578999999999999864 34 68999999876555677888999999887665 8999999999999999999
Q ss_pred ecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEE-------------------CC
Q 036334 422 YMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILL-------------------RP 482 (654)
Q Consensus 422 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll-------------------~~ 482 (654)
|+ ++++.+++... ....+++..++.++.|++.||+|||+++ |+||||||+|||+ +.
T Consensus 103 ~~-~~~l~~~l~~~---~~~~~~~~~~~~i~~qi~~~L~~lH~~~-ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~ 177 (355)
T 2eu9_A 103 LL-GKNTFEFLKEN---NFQPYPLPHVRHMAYQLCHALRFLHENQ-LTHTDLKPENILFVNSEFETLYNEHKSCEEKSVK 177 (355)
T ss_dssp CC-CCBHHHHHHHT---TTCCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEESCCCEEEEECCC-CCCEEEES
T ss_pred cc-CCChHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEecccccccccccccccccccC
Confidence 99 66777776543 2346999999999999999999999998 9999999999999 56
Q ss_pred CCCeEEeccCCCCCcCCC-CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHH
Q 036334 483 DHDACVSDFGLNPLFGNT-TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSV 561 (654)
Q Consensus 483 ~~~~kl~Dfgla~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~ 561 (654)
++.+||+|||++...... ....++..|+|||++.+..++.++|||||||++|||++|+.||......+ ....+...
T Consensus 178 ~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~---~~~~~~~~ 254 (355)
T 2eu9_A 178 NTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE---HLVMMEKI 254 (355)
T ss_dssp CCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHH
T ss_pred CCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHH
Confidence 789999999999865443 34567888999999999999999999999999999999999997543211 11111111
Q ss_pred hhh---chhh--------------------------hhhhHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 036334 562 VRE---EWTA--------------------------EVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVR 611 (654)
Q Consensus 562 ~~~---~~~~--------------------------~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 611 (654)
... .+.. +.................++.+++.+||+.||++|||++|+++
T Consensus 255 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 333 (355)
T 2eu9_A 255 LGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALL 333 (355)
T ss_dssp HCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred cCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 100 0000 0000000001112234457889999999999999999999975
No 222
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=6.8e-38 Score=333.97 Aligned_cols=192 Identities=24% Similarity=0.356 Sum_probs=165.1
Q ss_pred hhccccccCceeEEEEEec-CCcEEEEEEecccccCHHHHHHHHHHHhccC-CC-----ccccccEEEEeCCceEEEEEe
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAVGKREFEMQMEVLGKIK-HD-----NVVPLRAFYYSKDEKLLVYDY 422 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~-hp-----niv~l~~~~~~~~~~~lv~e~ 422 (654)
+.+.||+|+||+||+|... +++.||||+++.......++..|+.+++.++ |+ +|+++++++...+..++||||
T Consensus 58 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~ 137 (382)
T 2vx3_A 58 IDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEM 137 (382)
T ss_dssp EEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEEEEEC
T ss_pred EEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEEEEec
Confidence 4578999999999999865 5889999999866555567788888888775 44 499999999999999999999
Q ss_pred cCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhc--cCCeecCCCCCCcEEEC--CCCCeEEeccCCCCCcC
Q 036334 423 MPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHV--SGKIVHGNIKASNILLR--PDHDACVSDFGLNPLFG 498 (654)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~--~~~ivHrDlk~~NIll~--~~~~~kl~Dfgla~~~~ 498 (654)
++ |+|.+++.... ...+++..++.++.|++.||.|||. .+ |+||||||+|||++ .++.+||+|||++....
T Consensus 138 ~~-~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~al~~lH~~~~~-ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~ 212 (382)
T 2vx3_A 138 LS-YNLYDLLRNTN---FRGVSLNLTRKFAQQMCTALLFLATPELS-IIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG 212 (382)
T ss_dssp CC-CBHHHHHHHTT---TSCCCHHHHHHHHHHHHHHHHHHTSTTTC-EECCCCSGGGEEESSTTSCCEEECCCTTCEETT
T ss_pred CC-CCHHHHHhhcC---cCCCCHHHHHHHHHHHHHHHHHhccCCCC-EEcCCCCcccEEEecCCCCcEEEEeccCceecc
Confidence 95 59999997542 2458999999999999999999995 45 99999999999995 47789999999998765
Q ss_pred CC-CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 036334 499 NT-TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQAS 546 (654)
Q Consensus 499 ~~-~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~ 546 (654)
.. ....++..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 213 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 213 QRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp CCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 43 3456788899999999999999999999999999999999999764
No 223
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=7.4e-38 Score=331.49 Aligned_cols=252 Identities=19% Similarity=0.289 Sum_probs=190.9
Q ss_pred hhccccccCceeEEEEEec-CCcEEEEEEeccccc--CHHHHHHHHHHHhccCCCccccccEEEEeC-----CceEEEEE
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAV--GKREFEMQMEVLGKIKHDNVVPLRAFYYSK-----DEKLLVYD 421 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~e~~~l~~l~hpniv~l~~~~~~~-----~~~~lv~e 421 (654)
+.+.||+|+||.||+|... +++.||||++..... ....+.+|++++++++||||+++++++... ...++|||
T Consensus 31 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv~e 110 (364)
T 3qyz_A 31 NLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 110 (364)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEE
T ss_pred EEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEEEEc
Confidence 3578999999999999865 588999999975432 236788999999999999999999999765 36799999
Q ss_pred ecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC-
Q 036334 422 YMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT- 500 (654)
Q Consensus 422 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~- 500 (654)
|++ |+|.+++.. ..+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++......
T Consensus 111 ~~~-~~L~~~l~~------~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~ 182 (364)
T 3qyz_A 111 LME-TDLYKLLKT------QHLSNDHICYFLYQILRGLKYIHSAN-VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 182 (364)
T ss_dssp CCS-EEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECCGGG
T ss_pred ccC-cCHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCChHhEEECCCCCEEEEeCcceEecCCCC
Confidence 997 599999863 34899999999999999999999998 999999999999999999999999999765422
Q ss_pred ------CCCCccccccCccccCC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchh---hhh
Q 036334 501 ------TPPTRVAGYRAPEVVET-RKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWT---AEV 570 (654)
Q Consensus 501 ------~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 570 (654)
....++..|+|||++.+ ..++.++|||||||++|||++|+.||......+ ....+......... ...
T Consensus 183 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~~~~~ 259 (364)
T 3qyz_A 183 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD---QLNHILGILGSPSQEDLNCI 259 (364)
T ss_dssp CBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGG---HHHHHHHHHCSCCHHHHHTC
T ss_pred CccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHH---HHHHHHHHhCCCCHHHHHHh
Confidence 23467888999998754 458999999999999999999999997643322 11111111100000 000
Q ss_pred hh-------Hhhhc--cCCh----HHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 036334 571 FD-------VELMR--YHNI----EEEMVQLLQIAMGCVSTVPDQRPAMQEVVRM 612 (654)
Q Consensus 571 ~~-------~~~~~--~~~~----~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 612 (654)
.+ ..... .... .....++.+++.+||+.||++|||++|+++.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp CCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00 00000 0000 1112457788889999999999999999863
No 224
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=2e-38 Score=332.56 Aligned_cols=244 Identities=20% Similarity=0.352 Sum_probs=189.4
Q ss_pred hhccccccCceeEEEEEe-cCCcEEEEEEecccccC--HHHHHHHHHH-HhccCCCccccccEEEEeCCceEEEEEecCC
Q 036334 350 SAEVLGKGSVGTSYKAVL-EEGTTVVVKRLKEVAVG--KREFEMQMEV-LGKIKHDNVVPLRAFYYSKDEKLLVYDYMPA 425 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~--~~~~~~e~~~-l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~ 425 (654)
..+.||+|+||.||+|.. .+|+.||||+++..... ..++..|+.+ ++.++||||+++++++.+++..++||||+++
T Consensus 55 ~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 134 (340)
T 3an0_A 55 PIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDT 134 (340)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEECCCSE
T ss_pred EeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEHHHhhC
Confidence 357799999999999996 46899999999765333 3345555555 7888999999999999999999999999975
Q ss_pred CchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcc-CCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC---C
Q 036334 426 GSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS-GKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT---T 501 (654)
Q Consensus 426 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~---~ 501 (654)
+|.+++..... ....+++..++.++.|++.||+|||++ + |+||||||+|||++.++.+||+|||++...... .
T Consensus 135 -~L~~~l~~~~~-~~~~l~~~~~~~i~~qi~~~l~~lH~~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 211 (340)
T 3an0_A 135 -SLDKFYKQVID-KGQTIPEDILGKIAVSIVKALEHLHSKLS-VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKT 211 (340)
T ss_dssp -EHHHHHHHHHH-TSCCCCHHHHHHHHHHHHHHHHHHHHHTC-CCCCSCCSTTEEECSTTCEEECCCSHHHHHSCHHHHH
T ss_pred -cHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhcCC-eecCCCCHHHEEECCCCCEEEeeCCCceecccccccc
Confidence 99888763211 234699999999999999999999987 7 999999999999999999999999998765432 1
Q ss_pred CCCccccccCccccC----CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhc
Q 036334 502 PPTRVAGYRAPEVVE----TRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMR 577 (654)
Q Consensus 502 ~~~~~~~y~aPE~~~----~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 577 (654)
...++..|+|||++. ...++.++|||||||++|||++|+.||..... ....+..........
T Consensus 212 ~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~-----~~~~~~~~~~~~~~~--------- 277 (340)
T 3an0_A 212 IDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT-----PFQQLKQVVEEPSPQ--------- 277 (340)
T ss_dssp HSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSC-----HHHHHHHHHHSCCCC---------
T ss_pred cCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccc-----hHHHHHHHhcCCCCC---------
Confidence 235778899999964 34789999999999999999999999974321 111122221111100
Q ss_pred cCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 036334 578 YHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVR 611 (654)
Q Consensus 578 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 611 (654)
........++.+++.+||+.||++|||+.|+++
T Consensus 278 -~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 278 -LPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp -CCGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred -CCcccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 001112346778888999999999999999987
No 225
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=1.8e-37 Score=327.81 Aligned_cols=259 Identities=20% Similarity=0.288 Sum_probs=182.3
Q ss_pred hhccccccCceeEEEEEec-CCcEEEEEEecccccCHHHHHHHHHHHhccCCCccccccEEEEeCCc-------eEEEEE
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDE-------KLLVYD 421 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~-------~~lv~e 421 (654)
+.+.||+|+||.||+|... +|+.||||++.........+.++++.++.++||||++++++|...+. .++|||
T Consensus 27 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~lv~e 106 (360)
T 3e3p_A 27 VERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVME 106 (360)
T ss_dssp EC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEEEEE
T ss_pred EEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEEEEee
Confidence 3578999999999999965 58999999987665555667788888999999999999999976443 789999
Q ss_pred ecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhh--ccCCeecCCCCCCcEEECC-CCCeEEeccCCCCCcC
Q 036334 422 YMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLH--VSGKIVHGNIKASNILLRP-DHDACVSDFGLNPLFG 498 (654)
Q Consensus 422 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH--~~~~ivHrDlk~~NIll~~-~~~~kl~Dfgla~~~~ 498 (654)
|+++ +|.+.+..... ....+++..++.++.|++.||.||| +.+ |+||||||+|||++. ++.+||+|||++....
T Consensus 107 ~~~~-~l~~~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~~~-ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~ 183 (360)
T 3e3p_A 107 YVPD-TLHRCCRNYYR-RQVAPPPILIKVFLFQLIRSIGCLHLPSVN-VCHRDIKPHNVLVNEADGTLKLCDFGSAKKLS 183 (360)
T ss_dssp CCSC-BHHHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHTSTTTC-CBCSCCCGGGEEEETTTTEEEECCCTTCBCCC
T ss_pred cccc-cHHHHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHhCCCCC-eecCcCCHHHEEEeCCCCcEEEeeCCCceecC
Confidence 9986 54443332111 2456899999999999999999999 887 999999999999997 8999999999998765
Q ss_pred CCC---CCCccccccCccccCCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhch--hhhh--
Q 036334 499 NTT---PPTRVAGYRAPEVVETR-KVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEW--TAEV-- 570 (654)
Q Consensus 499 ~~~---~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~--~~~~-- 570 (654)
... ...++..|+|||++.+. .++.++|||||||++|||++|+.||...... ..+..+.+... ..+.
T Consensus 184 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~------~~~~~~~~~~~~~~~~~~~ 257 (360)
T 3e3p_A 184 PSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSA------GQLHEIVRVLGCPSREVLR 257 (360)
T ss_dssp TTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHHHCCCCHHHHH
T ss_pred CCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChH------HHHHHHHHHcCCCCHHHHH
Confidence 432 34567789999998654 4899999999999999999999999764321 11111111000 0000
Q ss_pred ------hhHhhh----------ccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH--HHhhh
Q 036334 571 ------FDVELM----------RYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRM--IENMN 617 (654)
Q Consensus 571 ------~~~~~~----------~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~--L~~~~ 617 (654)
.+.... ..........++.+++.+||+.||++|||+.|+++. ++++.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~ 322 (360)
T 3e3p_A 258 KLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELH 322 (360)
T ss_dssp HHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGG
T ss_pred hcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccC
Confidence 000000 000111134567888889999999999999999874 44443
No 226
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=5.2e-38 Score=327.16 Aligned_cols=251 Identities=21% Similarity=0.308 Sum_probs=190.3
Q ss_pred hhccccccCceeEEEEEe--cCCcEEEEEEeccccc---CHHHHHHHHHHHhcc---CCCccccccEEEE-----eCCce
Q 036334 350 SAEVLGKGSVGTSYKAVL--EEGTTVVVKRLKEVAV---GKREFEMQMEVLGKI---KHDNVVPLRAFYY-----SKDEK 416 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~--~~g~~vavK~~~~~~~---~~~~~~~e~~~l~~l---~hpniv~l~~~~~-----~~~~~ 416 (654)
+.+.||+|+||.||+|.. .+|+.||+|+++.... ....+.+|+.+++.+ +||||+++++++. .....
T Consensus 15 ~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~ 94 (326)
T 1blx_A 15 CVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKL 94 (326)
T ss_dssp EEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEE
T ss_pred eeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCceE
Confidence 457899999999999997 3588999999875432 223566777777666 8999999999987 45568
Q ss_pred EEEEEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCC
Q 036334 417 LLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPL 496 (654)
Q Consensus 417 ~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~ 496 (654)
++||||++ |+|.+++.... ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++..
T Consensus 95 ~lv~e~~~-~~L~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~g-i~H~dlkp~Nili~~~~~~kl~Dfg~~~~ 169 (326)
T 1blx_A 95 TLVFEHVD-QDLTTYLDKVP---EPGVPTETIKDMMFQLLRGLDFLHSHR-VVHRDLKPQNILVTSSGQIKLADFGLARI 169 (326)
T ss_dssp EEEEECCS-CBHHHHHHHSC---TTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECSCCSCCC
T ss_pred EEEEecCC-CCHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCCHHHeEEcCCCCEEEecCccccc
Confidence 99999997 69999987542 235899999999999999999999998 99999999999999999999999999987
Q ss_pred cCCC---CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhh-------ch
Q 036334 497 FGNT---TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVRE-------EW 566 (654)
Q Consensus 497 ~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~-------~~ 566 (654)
.... ....++..|+|||++.+..++.++|||||||++|||++|+.||...... ..+..+... .+
T Consensus 170 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~~~i~~~~~~~~~~~~ 243 (326)
T 1blx_A 170 YSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV------DQLGKILDVIGLPGEEDW 243 (326)
T ss_dssp CCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH------HHHHHHHHHHCCCCGGGS
T ss_pred ccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHH------HHHHHHHHHcCCCCcccC
Confidence 6532 3345677899999999989999999999999999999999999754321 111111110 00
Q ss_pred hhhhh--hHhhh------ccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 036334 567 TAEVF--DVELM------RYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVR 611 (654)
Q Consensus 567 ~~~~~--~~~~~------~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 611 (654)
..... ..... ...........+.+++.+||+.||++|||+.|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 244 PRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp CTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00000 00000 00000112235667888999999999999999985
No 227
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=3.5e-37 Score=327.10 Aligned_cols=248 Identities=20% Similarity=0.317 Sum_probs=188.3
Q ss_pred hhccccccCceeEEEEEec-CCcEEEEEEecccccC---HHHHHHHHHHHhccCCCccccccEEEEeCCce------EEE
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAVG---KREFEMQMEVLGKIKHDNVVPLRAFYYSKDEK------LLV 419 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~------~lv 419 (654)
..+.||+|+||.||+|... +|+.||||+++..... .+.+.+|+.++++++||||+++++++...+.. ++|
T Consensus 46 ~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv 125 (371)
T 4exu_A 46 SPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLV 125 (371)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCEEE
T ss_pred EEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEEEE
Confidence 3578999999999999865 5899999999765333 45678999999999999999999999877654 999
Q ss_pred EEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCC
Q 036334 420 YDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGN 499 (654)
Q Consensus 420 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~ 499 (654)
|||+. ++|.+++. ..+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++.....
T Consensus 126 ~e~~~-~~l~~~~~-------~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~ 196 (371)
T 4exu_A 126 MPFMQ-TDLQKIMG-------MEFSEEKIQYLVYQMLKGLKYIHSAG-VVHRDLKPGNLAVNEDCELKILDFGLARHADA 196 (371)
T ss_dssp EECCC-EEHHHHTT-------SCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECSTTCC-----
T ss_pred Ecccc-ccHHHHhh-------cCCCHHHHHHHHHHHHHHHHHHHHCC-CcCCCcCHHHeEECCCCCEEEEecCccccccc
Confidence 99997 68888874 23899999999999999999999998 99999999999999999999999999987654
Q ss_pred C-CCCCccccccCccccCC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhc------hhhhh-
Q 036334 500 T-TPPTRVAGYRAPEVVET-RKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREE------WTAEV- 570 (654)
Q Consensus 500 ~-~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~------~~~~~- 570 (654)
. ....++..|+|||++.+ ..++.++|||||||++|||++|+.||..... ...+..+.... +....
T Consensus 197 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~------~~~~~~i~~~~~~~~~~~~~~~~ 270 (371)
T 4exu_A 197 EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY------LDQLTQILKVTGVPGTEFVQKLN 270 (371)
T ss_dssp ---CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSH------HHHHHHHHHHHCCCCHHHHTTCS
T ss_pred CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCh------HHHHHHHHHHhCCCcHHHHHHhh
Confidence 3 33466888999999877 7899999999999999999999999975321 11111111100 00000
Q ss_pred ------hhHhhhc--cCCh----HHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 036334 571 ------FDVELMR--YHNI----EEEMVQLLQIAMGCVSTVPDQRPAMQEVVRM 612 (654)
Q Consensus 571 ------~~~~~~~--~~~~----~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 612 (654)
....... .... ......+.+++.+||+.||++|||++|+++.
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 271 DKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp CHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 0000000 0000 1123467788889999999999999999864
No 228
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=8.6e-38 Score=321.22 Aligned_cols=242 Identities=21% Similarity=0.322 Sum_probs=193.6
Q ss_pred hhccccccCceeEEEEEec-CCcEEEEEEecccc----------cCHHHHHHHHHHHhccC-CCccccccEEEEeCCceE
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVA----------VGKREFEMQMEVLGKIK-HDNVVPLRAFYYSKDEKL 417 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~----------~~~~~~~~e~~~l~~l~-hpniv~l~~~~~~~~~~~ 417 (654)
..+.||+|+||.||+|... +|+.||||+++... ...+.+.+|+++++++. ||||+++++++.+++..+
T Consensus 21 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~ 100 (298)
T 1phk_A 21 PKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFF 100 (298)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred eeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCeEE
Confidence 3578999999999999975 58899999986542 12345778999999996 999999999999999999
Q ss_pred EEEEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCc
Q 036334 418 LVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLF 497 (654)
Q Consensus 418 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~ 497 (654)
+||||+++++|.+++.. ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++...
T Consensus 101 lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 174 (298)
T 1phk_A 101 LVFDLMKKGELFDYLTE-----KVTLSEKETRKIMRALLEVICALHKLN-IVHRDLKPENILLDDDMNIKLTDFGFSCQL 174 (298)
T ss_dssp EEEECCTTCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEeccCCCcHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCcceEEEcCCCcEEEecccchhhc
Confidence 99999999999999974 245899999999999999999999998 999999999999999999999999998766
Q ss_pred CCC---CCCCccccccCccccC------CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhh
Q 036334 498 GNT---TPPTRVAGYRAPEVVE------TRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTA 568 (654)
Q Consensus 498 ~~~---~~~~~~~~y~aPE~~~------~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (654)
... ....++..|+|||++. ...++.++||||||+++|||++|+.||..... ......+.......
T Consensus 175 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~------~~~~~~~~~~~~~~ 248 (298)
T 1phk_A 175 DPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ------MLMLRMIMSGNYQF 248 (298)
T ss_dssp CTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHTCCCC
T ss_pred CCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccH------HHHHHHHhcCCccc
Confidence 433 2345677899999884 45688999999999999999999999965321 11112221111100
Q ss_pred hhhhHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 036334 569 EVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVR 611 (654)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 611 (654)
. ..........+.+++.+||+.||++|||+.|+++
T Consensus 249 ~--------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 249 G--------SPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp C--------TTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred C--------cccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 0 0001122346778888999999999999999976
No 229
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=1.1e-37 Score=333.53 Aligned_cols=251 Identities=24% Similarity=0.343 Sum_probs=185.3
Q ss_pred hhccccccCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHhccCCCccccccEEEEeCCc------eEEEEEec
Q 036334 350 SAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDE------KLLVYDYM 423 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~------~~lv~e~~ 423 (654)
..++||+|+||.||+|....+..||+|++..... ...+|+++++.++||||++++++|...+. .++||||+
T Consensus 44 ~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~---~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~ 120 (394)
T 4e7w_A 44 NCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR---FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYV 120 (394)
T ss_dssp EEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT---SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEECC
T ss_pred EeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc---hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeecc
Confidence 4578999999999999987777799998865332 22468999999999999999999975443 78999999
Q ss_pred CCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEEC-CCCCeEEeccCCCCCcCCC--
Q 036334 424 PAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLR-PDHDACVSDFGLNPLFGNT-- 500 (654)
Q Consensus 424 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~-~~~~~kl~Dfgla~~~~~~-- 500 (654)
+++.+........ ....+++..++.++.|+++||+|||+++ |+||||||+|||++ .++.+||+|||++......
T Consensus 121 ~~~l~~~~~~~~~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~~ 197 (394)
T 4e7w_A 121 PETVYRASRHYAK--LKQTMPMLLIKLYMYQLLRSLAYIHSIG-ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEP 197 (394)
T ss_dssp SEEHHHHHHHHHH--TTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCC
T ss_pred CccHHHHHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCCC
Confidence 8754443332111 2346899999999999999999999998 99999999999999 7899999999999765432
Q ss_pred -CCCCccccccCccccCCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhh---chhhh--hhhH
Q 036334 501 -TPPTRVAGYRAPEVVETR-KVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVRE---EWTAE--VFDV 573 (654)
Q Consensus 501 -~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~---~~~~~--~~~~ 573 (654)
....++..|+|||++.+. .++.++|||||||++|||++|+.||...... ..+..+... ..... ..+.
T Consensus 198 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~------~~l~~i~~~~g~p~~~~~~~~~~ 271 (394)
T 4e7w_A 198 NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGI------DQLVEIIKVLGTPSREQIKTMNP 271 (394)
T ss_dssp CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHHHCCCCHHHHHHHCG
T ss_pred CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHHHhCCCCHHHHHhhCh
Confidence 234567789999998664 5899999999999999999999999764321 111111110 00000 0000
Q ss_pred hhh-------ccCC-----hHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 036334 574 ELM-------RYHN-----IEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRM 612 (654)
Q Consensus 574 ~~~-------~~~~-----~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 612 (654)
... .... ......++.+++.+||+.||++|||+.|+++.
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 272 NYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp GGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred hhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 000 0000 00122467788889999999999999999874
No 230
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=3e-37 Score=315.58 Aligned_cols=242 Identities=24% Similarity=0.312 Sum_probs=193.4
Q ss_pred HhhccccccCceeEEEEEec-CCcEEEEEEecccc---cCHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecC
Q 036334 349 ASAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVA---VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMP 424 (654)
Q Consensus 349 ~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~ 424 (654)
.+.+.||+|+||.||+|... +++.||+|++.... .....+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 25 ~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 104 (287)
T 2wei_A 25 NIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYT 104 (287)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred eeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEEccC
Confidence 44688999999999999975 68999999986543 345678899999999999999999999999999999999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCC---CCeEEeccCCCCCcCCCC
Q 036334 425 AGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPD---HDACVSDFGLNPLFGNTT 501 (654)
Q Consensus 425 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~---~~~kl~Dfgla~~~~~~~ 501 (654)
+++|.+++... ..+++..++.++.|++.||+|||+++ |+||||||+||+++.+ +.+||+|||++.......
T Consensus 105 ~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~ 178 (287)
T 2wei_A 105 GGELFDEIIKR-----KRFSEHDAARIIKQVFSGITYMHKHN-IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT 178 (287)
T ss_dssp SCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCS
T ss_pred CCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCChhhEEEecCCCcccEEEeccCcceeecCCC
Confidence 99999988632 35899999999999999999999998 9999999999999764 469999999988765432
Q ss_pred C---CCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhcc
Q 036334 502 P---PTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRY 578 (654)
Q Consensus 502 ~---~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 578 (654)
. ..++..|+|||.+.+ .++.++||||||+++|||++|+.||..... ......+....... .....
T Consensus 179 ~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~------~~~~~~~~~~~~~~-----~~~~~ 246 (287)
T 2wei_A 179 KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE------YDILKRVETGKYAF-----DLPQW 246 (287)
T ss_dssp SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHCCCCC-----CSGGG
T ss_pred ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCH------HHHHHHHHcCCCCC-----Cchhh
Confidence 2 235667999999875 489999999999999999999999975321 12222221111100 00011
Q ss_pred CChHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 036334 579 HNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVR 611 (654)
Q Consensus 579 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 611 (654)
. ....++.+++.+||+.||++|||+.|+++
T Consensus 247 ~---~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 247 R---TISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp T---TSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred h---hcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 1 12235677888999999999999999987
No 231
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=1.4e-37 Score=336.99 Aligned_cols=244 Identities=25% Similarity=0.360 Sum_probs=182.4
Q ss_pred hccccccCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHhcc-CCCccccccEEEEeCCceEEEEEecCCCchh
Q 036334 351 AEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKI-KHDNVVPLRAFYYSKDEKLLVYDYMPAGSLS 429 (654)
Q Consensus 351 ~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e~~~~g~L~ 429 (654)
.++||+|+||+||.+...+|+.||||++.... .+.+.+|+++++++ +||||+++++++.+++..++||||++ |+|.
T Consensus 20 ~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~--~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL~ 96 (434)
T 2rio_A 20 EKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF--CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNLQ 96 (434)
T ss_dssp EEEEEECSTTCEEEEEESSSSEEEEEEEEGGG--HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEHH
T ss_pred cCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH--HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCHH
Confidence 46799999999987777779999999986532 35678899999876 89999999999999999999999995 6999
Q ss_pred hhhccCCCCCC--CCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCC-------------CCeEEeccCCC
Q 036334 430 ALLHGSRGSGR--TPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPD-------------HDACVSDFGLN 494 (654)
Q Consensus 430 ~~l~~~~~~~~--~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~-------------~~~kl~Dfgla 494 (654)
+++........ ...++..++.++.||+.||+|||+++ |+||||||+|||++.+ +.+||+|||++
T Consensus 97 ~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a 175 (434)
T 2rio_A 97 DLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK-IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLC 175 (434)
T ss_dssp HHHHTC------------CCHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTC
T ss_pred HHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC-ccccCCChHhEEEecCcccccccccCCCceEEEEcccccc
Confidence 99975432111 11234456789999999999999998 9999999999999754 47999999999
Q ss_pred CCcCCCC--------CCCccccccCccccCC-------CCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHH
Q 036334 495 PLFGNTT--------PPTRVAGYRAPEVVET-------RKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWV 558 (654)
Q Consensus 495 ~~~~~~~--------~~~~~~~y~aPE~~~~-------~~~~~~~DvwslGvil~el~t-g~~pf~~~~~~~~~~~~~~~ 558 (654)
....... ...++.+|+|||++.+ ..++.++|||||||++|||++ |+.||......+
T Consensus 176 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~-------- 247 (434)
T 2rio_A 176 KKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE-------- 247 (434)
T ss_dssp EECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH--------
T ss_pred eecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH--------
Confidence 8765431 2357788999999865 678999999999999999999 999996432110
Q ss_pred HHHhhhchhhhhhhHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 036334 559 QSVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVR 611 (654)
Q Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 611 (654)
..+......... ...........++.+++.+||+.||++|||+.|+++
T Consensus 248 ~~i~~~~~~~~~-----~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 248 SNIIRGIFSLDE-----MKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp HHHHHTCCCCCC-----CTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHhcCCCCccc-----ccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 111111110000 011112344567788899999999999999999975
No 232
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=2.3e-37 Score=323.93 Aligned_cols=245 Identities=19% Similarity=0.243 Sum_probs=167.1
Q ss_pred hccccccCceeEEEEEec-CCcEEEEEEecccccCHHHHHHHHHHHhccCCCccccccEEEEe----CCceEEEEEecCC
Q 036334 351 AEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYS----KDEKLLVYDYMPA 425 (654)
Q Consensus 351 ~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~----~~~~~lv~e~~~~ 425 (654)
.++||+|+||+||+|... +|+.||||++..... ...+....++.++||||+++++++.. ....++||||+++
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~g 110 (336)
T 3fhr_A 34 KQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPK---ARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEG 110 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEESSHH---HHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCTT
T ss_pred ceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHH---HHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEeccCC
Confidence 357999999999999966 689999999865322 22223334667789999999999876 3457999999999
Q ss_pred CchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCC---CCeEEeccCCCCCcCCC--
Q 036334 426 GSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPD---HDACVSDFGLNPLFGNT-- 500 (654)
Q Consensus 426 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~---~~~kl~Dfgla~~~~~~-- 500 (654)
|+|.+++.... ...+++..++.++.|++.||+|||+++ |+||||||+||+++.+ +.+||+|||++......
T Consensus 111 g~L~~~l~~~~---~~~l~~~~~~~i~~ql~~~l~~LH~~~-ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~~~ 186 (336)
T 3fhr_A 111 GELFSRIQERG---DQAFTEREAAEIMRDIGTAIQFLHSHN-IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNAL 186 (336)
T ss_dssp EEHHHHHHTC----CCCCBHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCSSTTCCEEECCCTTCEEC-----
T ss_pred CCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEEecCCCceEEEeccccceecccccc
Confidence 99999998542 346999999999999999999999998 9999999999999864 45999999999765433
Q ss_pred CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccCC
Q 036334 501 TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHN 580 (654)
Q Consensus 501 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 580 (654)
....++..|+|||++.+..++.++|||||||++|||++|+.||.......... .......... .......
T Consensus 187 ~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~--~~~~~~~~~~-----~~~~~~~--- 256 (336)
T 3fhr_A 187 QTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISP--GMKRRIRLGQ-----YGFPNPE--- 256 (336)
T ss_dssp -----------------CHHHHHHHHHHHHHHHHHHHHSSCCC----------------------------CCCTTT---
T ss_pred ccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhh--hHHHhhhccc-----cccCchh---
Confidence 33456788999999988889999999999999999999999997643322100 0000000000 0000000
Q ss_pred hHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 036334 581 IEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRM 612 (654)
Q Consensus 581 ~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 612 (654)
......++.+++.+||+.||++|||++|+++.
T Consensus 257 ~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 257 WSEVSEDAKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp STTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred hccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 01223456778889999999999999999983
No 233
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.2e-37 Score=332.05 Aligned_cols=256 Identities=18% Similarity=0.278 Sum_probs=187.8
Q ss_pred hhccccccCceeEEEEEe-cCCcEEEEEEecccccCHHHHHHHHHHHhccCCCccccccEEEEeC---------------
Q 036334 350 SAEVLGKGSVGTSYKAVL-EEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSK--------------- 413 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~--------------- 413 (654)
+.+.||+|+||+||+|.. .+|+.||||++..... ...+|+++++.++||||++++++|...
T Consensus 11 ~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~---~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~ 87 (383)
T 3eb0_A 11 LGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR---YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHN 87 (383)
T ss_dssp EEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT---SCCHHHHHHTTCCCTTBCCEEEEEEEC---------------
T ss_pred EEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc---hHHHHHHHHHHcCCCCccchhheeeecCcccccccccccccc
Confidence 457899999999999985 5689999999865432 234699999999999999999998543
Q ss_pred -----------------------CceEEEEEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeec
Q 036334 414 -----------------------DEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVH 470 (654)
Q Consensus 414 -----------------------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivH 470 (654)
...++||||++ |+|.+.+..... ....+++..++.++.|+++||+|||+++ |+|
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~g-i~H 164 (383)
T 3eb0_A 88 KLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIR-SGRSIPMNLISIYIYQLFRAVGFIHSLG-ICH 164 (383)
T ss_dssp ----------------------CCEEEEEECCCS-EEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHTTT-EEC
T ss_pred cccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCc-Ccc
Confidence 23789999997 587777753211 2356999999999999999999999998 999
Q ss_pred CCCCCCcEEEC-CCCCeEEeccCCCCCcCCC---CCCCccccccCccccCCC-CCCcchhHHHHHHHHHHHHhCCCCCCC
Q 036334 471 GNIKASNILLR-PDHDACVSDFGLNPLFGNT---TPPTRVAGYRAPEVVETR-KVTFKSDVYSFGVLLLELLTGKAPNQA 545 (654)
Q Consensus 471 rDlk~~NIll~-~~~~~kl~Dfgla~~~~~~---~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvil~el~tg~~pf~~ 545 (654)
|||||+|||++ .++.+||+|||++...... ....++..|+|||++.+. .++.++||||+||++|||++|+.||..
T Consensus 165 ~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 244 (383)
T 3eb0_A 165 RDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSG 244 (383)
T ss_dssp SCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCC
Confidence 99999999998 6889999999999865433 234567779999998764 589999999999999999999999976
Q ss_pred CCCCCCCChhHHHHHHhh---hchhhhhh--hHhh-----h--ccC-----ChHHHHHHHHHHHhhccCCCCCCCCCHHH
Q 036334 546 SLGEEGIDLPRWVQSVVR---EEWTAEVF--DVEL-----M--RYH-----NIEEEMVQLLQIAMGCVSTVPDQRPAMQE 608 (654)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~---~~~~~~~~--~~~~-----~--~~~-----~~~~~~~~l~~l~~~cl~~dP~~RPs~~e 608 (654)
.... +.+..+.. ........ ++.. . ... .......++.+++.+||+.||++|||+.|
T Consensus 245 ~~~~------~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e 318 (383)
T 3eb0_A 245 ETSI------DQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYE 318 (383)
T ss_dssp SSHH------HHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHH
T ss_pred CChH------HHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHH
Confidence 4321 11111111 00000000 0000 0 000 00112235778888999999999999999
Q ss_pred HHH--HHHhhh
Q 036334 609 VVR--MIENMN 617 (654)
Q Consensus 609 vl~--~L~~~~ 617 (654)
+++ .++++.
T Consensus 319 ~l~hp~f~~~~ 329 (383)
T 3eb0_A 319 AMAHPFFDHLR 329 (383)
T ss_dssp HHTSGGGHHHH
T ss_pred HhcCHHHHHHH
Confidence 985 244443
No 234
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=1.7e-37 Score=319.26 Aligned_cols=242 Identities=21% Similarity=0.351 Sum_probs=186.0
Q ss_pred HhhccccccCceeEEEEEec-CCcEEEEEEecccccCHHHHHHHHHHHhccCCCccccccEEEEe-------------CC
Q 036334 349 ASAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYS-------------KD 414 (654)
Q Consensus 349 ~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~-------------~~ 414 (654)
...+.||+|+||.||+|... +|+.||||+++......+.+.+|+.++++++||||+++++++.+ .+
T Consensus 9 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~ 88 (303)
T 1zy4_A 9 EEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKS 88 (303)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------CEE
T ss_pred hhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccccCC
Confidence 34578999999999999964 68999999997665556778999999999999999999998865 34
Q ss_pred ceEEEEEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCC
Q 036334 415 EKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLN 494 (654)
Q Consensus 415 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla 494 (654)
..++||||+++|+|.+++... ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++
T Consensus 89 ~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~ 163 (303)
T 1zy4_A 89 TLFIQMEYCENGTLYDLIHSE----NLNQQRDEYWRLFRQILEALSYIHSQG-IIHRDLKPMNIFIDESRNVKIGDFGLA 163 (303)
T ss_dssp EEEEEEECCCSCBHHHHHHHS----CGGGCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECCCCCC
T ss_pred ceEEEEecCCCCCHHHhhhcc----ccccchHHHHHHHHHHHHHHHHHHhCC-eecccCCHHhEEEcCCCCEEEeeCcch
Confidence 679999999999999999743 235788999999999999999999998 999999999999999999999999998
Q ss_pred CCcCCC------------------CCCCccccccCccccCCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChh
Q 036334 495 PLFGNT------------------TPPTRVAGYRAPEVVETR-KVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLP 555 (654)
Q Consensus 495 ~~~~~~------------------~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~ 555 (654)
...... ....++..|+|||++.+. .++.++|||||||++|||++ ||.... +..
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~-----~~~ 235 (303)
T 1zy4_A 164 KNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM-----ERV 235 (303)
T ss_dssp SCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH-----HHH
T ss_pred hhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch-----hHH
Confidence 765421 123456779999999764 78999999999999999998 543210 011
Q ss_pred HHHHHHhhhchhhhhhhHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 036334 556 RWVQSVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVR 611 (654)
Q Consensus 556 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 611 (654)
........... .+. ..........+.+++.+||+.||++|||++++++
T Consensus 236 ~~~~~~~~~~~---~~~-----~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 236 NILKKLRSVSI---EFP-----PDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp HHHHHHHSTTC---CCC-----TTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhcccccc---ccC-----ccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 11111110000 000 0111222345677888999999999999999986
No 235
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=1.2e-37 Score=336.09 Aligned_cols=256 Identities=25% Similarity=0.347 Sum_probs=186.7
Q ss_pred hhccccccCceeEEEEEec-CCcEEEEEEecccccCHHHHHHHHHHHhccCCCccccccEEEEeCC------ceEEEEEe
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVVPLRAFYYSKD------EKLLVYDY 422 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~------~~~lv~e~ 422 (654)
..++||+|+||.||+|.+. +|+.||||++.... ....+|++++++++||||++++++|.... ..++||||
T Consensus 58 ~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~ 134 (420)
T 1j1b_A 58 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK---RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDY 134 (420)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT---TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEEC
T ss_pred eeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc---hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehhc
Confidence 4578999999999999975 58999999986542 23346999999999999999999986422 25799999
Q ss_pred cCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCC-CCeEEeccCCCCCcCCC-
Q 036334 423 MPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPD-HDACVSDFGLNPLFGNT- 500 (654)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~-~~~kl~Dfgla~~~~~~- 500 (654)
+++ ++.+.+..... ....+++..++.++.||++||+|||+++ |+||||||+|||++.+ +.+||+|||+++.....
T Consensus 135 ~~~-~l~~~~~~~~~-~~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~~ 211 (420)
T 1j1b_A 135 VPE-TVYRVARHYSR-AKQTLPVIYVKLYMYQLFRSLAYIHSFG-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 211 (420)
T ss_dssp CCE-EHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHTTT-EECSCCSGGGEEEETTTTEEEECCCTTCEECCTTC
T ss_pred ccc-cHHHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChhhEEEeCCCCeEEeccchhhhhcccCC
Confidence 975 66665542111 2356999999999999999999999998 9999999999999965 56899999999865432
Q ss_pred --CCCCccccccCccccCCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhh---chhhhh--hh
Q 036334 501 --TPPTRVAGYRAPEVVETR-KVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVRE---EWTAEV--FD 572 (654)
Q Consensus 501 --~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~--~~ 572 (654)
....++..|+|||++.+. .++.++|||||||++|||++|+.||...... +.+..++.. .....+ .+
T Consensus 212 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~------~~l~~i~~~lg~p~~~~~~~~~ 285 (420)
T 1j1b_A 212 PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV------DQLVEIIKVLGTPTREQIREMN 285 (420)
T ss_dssp CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHHHCSCCHHHHHHHC
T ss_pred CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHHHhCCCCHHHHHhhC
Confidence 234567789999998764 7999999999999999999999999764321 111111110 000000 00
Q ss_pred H-----hhhc--cC-----ChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH--HHhhh
Q 036334 573 V-----ELMR--YH-----NIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRM--IENMN 617 (654)
Q Consensus 573 ~-----~~~~--~~-----~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~--L~~~~ 617 (654)
+ .+.. .. .......++.+|+.+||..||++|||+.|+++. ++++.
T Consensus 286 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 344 (420)
T 1j1b_A 286 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 344 (420)
T ss_dssp SCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGG
T ss_pred hhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhcccc
Confidence 0 0000 00 001112457788889999999999999999863 44443
No 236
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=1.6e-37 Score=327.49 Aligned_cols=247 Identities=21% Similarity=0.311 Sum_probs=187.7
Q ss_pred hccccccCceeEEEEEec-CCcEEEEEEecccccC---HHHHHHHHHHHhccCCCccccccEEEEeCCc------eEEEE
Q 036334 351 AEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAVG---KREFEMQMEVLGKIKHDNVVPLRAFYYSKDE------KLLVY 420 (654)
Q Consensus 351 ~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~------~~lv~ 420 (654)
.+.||+|+||.||+|... +|+.||||++...... .+.+.+|+.++++++||||+++++++...+. .++||
T Consensus 29 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~ 108 (353)
T 3coi_A 29 PTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVM 108 (353)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEE
T ss_pred eeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEEEEe
Confidence 478999999999999964 5899999999764332 3567889999999999999999999987654 49999
Q ss_pred EecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC
Q 036334 421 DYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT 500 (654)
Q Consensus 421 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~ 500 (654)
||++ |+|.+++. ..+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++......
T Consensus 109 e~~~-~~l~~~~~-------~~~~~~~~~~i~~qi~~al~~LH~~~-ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 179 (353)
T 3coi_A 109 PFMQ-TDLQKIMG-------LKFSEEKIQYLVYQMLKGLKYIHSAG-VVHRDLKPGNLAVNEDCELKILDFGLARHADAE 179 (353)
T ss_dssp ECCS-EEGGGTTT-------SCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCCGGGEEECTTCCEEECSTTCTTC----
T ss_pred cccc-CCHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEeECCCCcEEEeecccccCCCCC
Confidence 9997 68888874 23899999999999999999999998 999999999999999999999999999876543
Q ss_pred -CCCCccccccCccccCC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhh------chhhhhhh
Q 036334 501 -TPPTRVAGYRAPEVVET-RKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVRE------EWTAEVFD 572 (654)
Q Consensus 501 -~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 572 (654)
....++..|+|||++.+ ..++.++|||||||++|||++|+.||..... ...+..+... .+.....+
T Consensus 180 ~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~------~~~~~~i~~~~~~~~~~~~~~~~~ 253 (353)
T 3coi_A 180 MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY------LDQLTQILKVTGVPGTEFVQKLND 253 (353)
T ss_dssp ----CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCH------HHHHHHHHHHHCBCCHHHHTTCSC
T ss_pred ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHHHhCCCCHHHHHHHhh
Confidence 23456788999999876 6789999999999999999999999975432 1111111110 00000000
Q ss_pred H-------hhhc------cCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 036334 573 V-------ELMR------YHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRM 612 (654)
Q Consensus 573 ~-------~~~~------~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 612 (654)
. .+.. .........++.+++.+||+.||++|||++|+++.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 254 KAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp HHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0 0000 00011223467788889999999999999999863
No 237
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=4e-37 Score=319.25 Aligned_cols=249 Identities=19% Similarity=0.298 Sum_probs=182.6
Q ss_pred hhccccccCceeEEEEEecC-CcEEEEEEecccc-cCHHHHHHHHHHHhccCCCccccccEEEE--------------eC
Q 036334 350 SAEVLGKGSVGTSYKAVLEE-GTTVVVKRLKEVA-VGKREFEMQMEVLGKIKHDNVVPLRAFYY--------------SK 413 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~~-g~~vavK~~~~~~-~~~~~~~~e~~~l~~l~hpniv~l~~~~~--------------~~ 413 (654)
..+.||+|+||.||+|.... |+.||+|++.... ...+++.+|++++++++||||+++++++. +.
T Consensus 15 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~ 94 (320)
T 2i6l_A 15 DLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTEL 94 (320)
T ss_dssp EEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CCSC
T ss_pred EEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccccccc
Confidence 35789999999999999764 8999999987543 33467889999999999999999999874 34
Q ss_pred CceEEEEEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEEC-CCCCeEEeccC
Q 036334 414 DEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLR-PDHDACVSDFG 492 (654)
Q Consensus 414 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~-~~~~~kl~Dfg 492 (654)
...++||||++ |+|.+++.. ..+++..++.++.|++.||+|||+++ |+||||||+||+++ +++.+||+|||
T Consensus 95 ~~~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~kl~Dfg 166 (320)
T 2i6l_A 95 NSVYIVQEYME-TDLANVLEQ------GPLLEEHARLFMYQLLRGLKYIHSAN-VLHRDLKPANLFINTEDLVLKIGDFG 166 (320)
T ss_dssp SEEEEEEECCS-EEHHHHHTT------CCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSGGGEEEETTTTEEEECCCT
T ss_pred CceeEEeeccC-CCHHHHhhc------CCccHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEcCCCCeEEEccCc
Confidence 56799999997 699999862 45899999999999999999999998 99999999999997 56789999999
Q ss_pred CCCCcCCC-------CCCCccccccCccccCC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhh
Q 036334 493 LNPLFGNT-------TPPTRVAGYRAPEVVET-RKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVRE 564 (654)
Q Consensus 493 la~~~~~~-------~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 564 (654)
++...... ....++..|+|||++.+ ..++.++|||||||++|||++|+.||...... .....+...
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~------~~~~~~~~~ 240 (320)
T 2i6l_A 167 LARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHEL------EQMQLILES 240 (320)
T ss_dssp TCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHH
T ss_pred cccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHH------HHHHHHHHh
Confidence 99876432 12234667999998865 67899999999999999999999999754321 111111111
Q ss_pred ch------hhh-------hhhHhhhccCCh-----HHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 036334 565 EW------TAE-------VFDVELMRYHNI-----EEEMVQLLQIAMGCVSTVPDQRPAMQEVVRM 612 (654)
Q Consensus 565 ~~------~~~-------~~~~~~~~~~~~-----~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 612 (654)
.. ..+ ............ .....++.+++.+||+.||++|||++|+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 241 IPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp SCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred cCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 00 000 000000000000 1123457788889999999999999999863
No 238
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=3.2e-37 Score=319.48 Aligned_cols=241 Identities=20% Similarity=0.305 Sum_probs=187.8
Q ss_pred hhccccccCceeEEEEEecCCcEEEEEEeccccc---CHHHHHHHHHHHhccC--CCccccccEEEEeCCceEEEEEecC
Q 036334 350 SAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAV---GKREFEMQMEVLGKIK--HDNVVPLRAFYYSKDEKLLVYDYMP 424 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~---~~~~~~~e~~~l~~l~--hpniv~l~~~~~~~~~~~lv~e~~~ 424 (654)
+.+.||+|+||.||++...+++.||||++..... ..+.+.+|++++++++ ||||+++++++.+++..++||| +.
T Consensus 32 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~ 110 (313)
T 3cek_A 32 ILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CG 110 (313)
T ss_dssp EEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEEC-CC
T ss_pred EEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEe-cC
Confidence 3478999999999999988899999999965433 2456889999999997 5999999999999999999999 56
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCCC---
Q 036334 425 AGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTT--- 501 (654)
Q Consensus 425 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~--- 501 (654)
+++|.+++... ..+++..++.++.|++.||+|||+++ |+||||||+||+++ ++.+||+|||++.......
T Consensus 111 ~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~~~~~~~~ 183 (313)
T 3cek_A 111 NIDLNSWLKKK-----KSIDPWERKSYWKNMLEAVHTIHQHG-IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSV 183 (313)
T ss_dssp SEEHHHHHHHC-----SSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEE-TTEEEECCCSSSCC--------
T ss_pred CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCcccEEEE-CCeEEEeeccccccccCccccc
Confidence 88999999742 45899999999999999999999998 99999999999996 4899999999998764332
Q ss_pred ---CCCccccccCccccCC-----------CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchh
Q 036334 502 ---PPTRVAGYRAPEVVET-----------RKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWT 567 (654)
Q Consensus 502 ---~~~~~~~y~aPE~~~~-----------~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 567 (654)
...++..|+|||++.+ ..++.++|||||||++|||++|+.||..... ....+.........
T Consensus 184 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-----~~~~~~~~~~~~~~ 258 (313)
T 3cek_A 184 VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-----QISKLHAIIDPNHE 258 (313)
T ss_dssp ------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCS-----HHHHHHHHHCTTSC
T ss_pred cccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHH-----HHHHHHHHHhcccc
Confidence 2356788999999865 4788999999999999999999999964321 11111111111110
Q ss_pred hhhhhHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 036334 568 AEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRMI 613 (654)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 613 (654)
.. .... ...++.+++.+||+.||++|||++|+++.-
T Consensus 259 ~~-------~~~~---~~~~l~~li~~~l~~dp~~Rps~~ell~h~ 294 (313)
T 3cek_A 259 IE-------FPDI---PEKDLQDVLKCCLKRDPKQRISIPELLAHP 294 (313)
T ss_dssp CC-------CCCC---SCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred cC-------Cccc---chHHHHHHHHHHccCCcccCcCHHHHhcCc
Confidence 00 0011 123567788899999999999999998753
No 239
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=4.7e-37 Score=323.74 Aligned_cols=250 Identities=21% Similarity=0.297 Sum_probs=188.4
Q ss_pred hhccccccCceeEEEEEec-CCcEEEEEEeccccc--CHHHHHHHHHHHhccCCCccccccEEEEeC-----CceEEEEE
Q 036334 350 SAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAV--GKREFEMQMEVLGKIKHDNVVPLRAFYYSK-----DEKLLVYD 421 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~e~~~l~~l~hpniv~l~~~~~~~-----~~~~lv~e 421 (654)
+.+.||+|+||.||+|... +|+.||||++..... ...++.+|++++++++||||+++++++... ...++|||
T Consensus 15 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e 94 (353)
T 2b9h_A 15 LKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQE 94 (353)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEEEC
T ss_pred EeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEEEe
Confidence 3578999999999999965 588999999965432 245678999999999999999999988754 56899999
Q ss_pred ecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC-
Q 036334 422 YMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT- 500 (654)
Q Consensus 422 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~- 500 (654)
|+. |+|.+++.. ..+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++......
T Consensus 95 ~~~-~~L~~~~~~------~~~~~~~~~~~~~qi~~~L~~LH~~~-ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 166 (353)
T 2b9h_A 95 LMQ-TDLHRVIST------QMLSDDHIQYFIYQTLRAVKVLHGSN-VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESA 166 (353)
T ss_dssp CCS-EEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred ccC-ccHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEEcCCCcEEEEeccccccccccc
Confidence 996 699999873 35899999999999999999999998 999999999999999999999999998765422
Q ss_pred -------------CCCCccccccCccccCC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhch
Q 036334 501 -------------TPPTRVAGYRAPEVVET-RKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEW 566 (654)
Q Consensus 501 -------------~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 566 (654)
....++..|+|||++.+ ..++.++|||||||++|||++|+.||......+ ....+........
T Consensus 167 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~~~~~~~~~~~~ 243 (353)
T 2b9h_A 167 ADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH---QLLLIFGIIGTPH 243 (353)
T ss_dssp -------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCCCC
T ss_pred ccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHH---HHHHHHHHhCCCc
Confidence 11345778999998754 778999999999999999999999997643111 0000000000000
Q ss_pred ----h--------hhhhhHhhhcc--CC----hHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 036334 567 ----T--------AEVFDVELMRY--HN----IEEEMVQLLQIAMGCVSTVPDQRPAMQEVVR 611 (654)
Q Consensus 567 ----~--------~~~~~~~~~~~--~~----~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 611 (654)
. .+... .+... .. ......++.+++.+||+.||++|||++|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 244 SDNDLRCIESPRAREYIK-SLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp STTTTTTCCCHHHHHHHH-TSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhccccccccchhhHHhh-cccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0 00000 00000 00 0112345678888999999999999999987
No 240
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=1.1e-37 Score=325.04 Aligned_cols=247 Identities=22% Similarity=0.353 Sum_probs=171.7
Q ss_pred hccccccCceeEEEEEec-CCcEEEEEEeccccc--CHHHHHHHHH-HHhccCCCccccccEEEEeCCceEEEEEecCCC
Q 036334 351 AEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAV--GKREFEMQME-VLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPAG 426 (654)
Q Consensus 351 ~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~e~~-~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g 426 (654)
.+.||+|+||.||+|... +|+.||||+++.... ...++..|+. +++.++||||+++++++.+++..++||||+++
T Consensus 27 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~~- 105 (327)
T 3aln_A 27 LGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMST- 105 (327)
T ss_dssp -CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCSE-
T ss_pred hheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecCC-
Confidence 478999999999999975 689999999976532 2334555655 67888999999999999999999999999975
Q ss_pred chhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcc-CCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCCC---C
Q 036334 427 SLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS-GKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTT---P 502 (654)
Q Consensus 427 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~---~ 502 (654)
+|.+++..........+++..+.+++.|++.||.|||+. + |+||||||+||+++.++.+||+|||++....... .
T Consensus 106 ~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~-ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 184 (327)
T 3aln_A 106 SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK-IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTR 184 (327)
T ss_dssp EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS-CCCSCCCGGGEEEETTTEEEECCCSSSCC---------
T ss_pred ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC-EeECCCCHHHEEEcCCCCEEEccCCCceeccccccccc
Confidence 887777532111245689999999999999999999998 7 9999999999999999999999999998764432 2
Q ss_pred CCccccccCcccc----CCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhcc
Q 036334 503 PTRVAGYRAPEVV----ETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRY 578 (654)
Q Consensus 503 ~~~~~~y~aPE~~----~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 578 (654)
..++..|+|||++ .+..++.++|||||||++|||++|+.||........ .+....... . ..+ ..
T Consensus 185 ~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-----~~~~~~~~~-~-----~~~-~~ 252 (327)
T 3aln_A 185 DAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD-----QLTQVVKGD-P-----PQL-SN 252 (327)
T ss_dssp ---------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC------------CCCCCSC-C-----CCC-CC
T ss_pred CCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH-----HHHHHhcCC-C-----CCC-CC
Confidence 3567789999998 456789999999999999999999999975322110 000000000 0 000 00
Q ss_pred CChHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 036334 579 HNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVR 611 (654)
Q Consensus 579 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 611 (654)
.........+.+++.+||+.||++|||+.|+++
T Consensus 253 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 253 SEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp CSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred cccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 000112345778888999999999999999976
No 241
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=1.1e-37 Score=324.08 Aligned_cols=233 Identities=21% Similarity=0.369 Sum_probs=189.6
Q ss_pred hhccccccCceeEEEEEe-cCCcEEEEEEeccccc-------CHHHHHHHHHHHhccC--CCccccccEEEEeCCceEEE
Q 036334 350 SAEVLGKGSVGTSYKAVL-EEGTTVVVKRLKEVAV-------GKREFEMQMEVLGKIK--HDNVVPLRAFYYSKDEKLLV 419 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~-~~g~~vavK~~~~~~~-------~~~~~~~e~~~l~~l~--hpniv~l~~~~~~~~~~~lv 419 (654)
+.+.||+|+||.||+|.. .+|+.||||+++.... ....+.+|+.++++++ ||||+++++++.+++..++|
T Consensus 47 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~~lv 126 (320)
T 3a99_A 47 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI 126 (320)
T ss_dssp EEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEE
T ss_pred EEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCcEEEE
Confidence 357899999999999985 4688999999976532 2245678999999996 59999999999999999999
Q ss_pred EEecCC-CchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEEC-CCCCeEEeccCCCCCc
Q 036334 420 YDYMPA-GSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLR-PDHDACVSDFGLNPLF 497 (654)
Q Consensus 420 ~e~~~~-g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~-~~~~~kl~Dfgla~~~ 497 (654)
|||+.+ ++|.+++.. ...+++..++.++.|++.||+|||+.+ |+||||||+|||++ .++.+||+|||++...
T Consensus 127 ~e~~~~~~~L~~~l~~-----~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~ 200 (320)
T 3a99_A 127 LERPEPVQDLFDFITE-----RGALQEELARSFFWQVLEAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALL 200 (320)
T ss_dssp EECCSSEEEHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EEcCCCCccHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-cEeCCCCHHHEEEeCCCCCEEEeeCcccccc
Confidence 999976 899999974 245899999999999999999999998 99999999999999 7789999999998876
Q ss_pred CCC--CCCCccccccCccccCCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHh
Q 036334 498 GNT--TPPTRVAGYRAPEVVETRKV-TFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVE 574 (654)
Q Consensus 498 ~~~--~~~~~~~~y~aPE~~~~~~~-~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 574 (654)
... ....++..|+|||++.+..+ +.++|||||||++|||++|+.||.... ........
T Consensus 201 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~------------~~~~~~~~------- 261 (320)
T 3a99_A 201 KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------------EIIRGQVF------- 261 (320)
T ss_dssp CSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------------HHHHCCCC-------
T ss_pred ccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh------------hhhccccc-------
Confidence 543 23457788999999977666 688999999999999999999996421 01111000
Q ss_pred hhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 036334 575 LMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRM 612 (654)
Q Consensus 575 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 612 (654)
.... ...++.+++.+||+.||++|||++|+++.
T Consensus 262 --~~~~---~~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 262 --FRQR---VSSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp --CSSC---CCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred --cccc---CCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0011 12356778889999999999999999873
No 242
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=4.3e-37 Score=314.16 Aligned_cols=227 Identities=14% Similarity=0.099 Sum_probs=178.4
Q ss_pred hccccccCceeEEEEEecC-CcEEEEEEecccccC----HHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecCC
Q 036334 351 AEVLGKGSVGTSYKAVLEE-GTTVVVKRLKEVAVG----KREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMPA 425 (654)
Q Consensus 351 ~~~lg~G~fg~Vy~~~~~~-g~~vavK~~~~~~~~----~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~ 425 (654)
.+.||+|+||.||+|.... |+.||||++...... .+.+.+|+..+++++||||+++++++.+++..|+||||+++
T Consensus 36 ~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g 115 (286)
T 3uqc_A 36 LIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAEWIRG 115 (286)
T ss_dssp EEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCE
T ss_pred EEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEEEecCC
Confidence 4789999999999999754 899999999866433 26788999999999999999999999999999999999999
Q ss_pred CchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCCCCCCc
Q 036334 426 GSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTR 505 (654)
Q Consensus 426 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~ 505 (654)
++|.+++.. . ....++.+++.|++.||+|||+++ |+||||||+|||++.++.+||+++|
T Consensus 116 ~~L~~~l~~------~-~~~~~~~~i~~ql~~aL~~lH~~g-ivH~Dikp~NIll~~~g~~kl~~~~------------- 174 (286)
T 3uqc_A 116 GSLQEVADT------S-PSPVGAIRAMQSLAAAADAAHRAG-VALSIDHPSRVRVSIDGDVVLAYPA------------- 174 (286)
T ss_dssp EEHHHHHTT------C-CCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEEETTSCEEECSCC-------------
T ss_pred CCHHHHHhc------C-CChHHHHHHHHHHHHHHHHHHHCC-CccCCCCcccEEEcCCCCEEEEecc-------------
Confidence 999999952 1 355678899999999999999998 9999999999999999999998554
Q ss_pred cccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccCChHHHH
Q 036334 506 VAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEM 585 (654)
Q Consensus 506 ~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 585 (654)
|++| ++.++|||||||++|||++|+.||......+...... ...... ...... .... ..
T Consensus 175 ---~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~---~~~~~~----~~~~~~-~~~~---~~ 233 (286)
T 3uqc_A 175 ---TMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAE---RDTAGQ----PIEPAD-IDRD---IP 233 (286)
T ss_dssp ---CCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECC---BCTTSC----BCCHHH-HCTT---SC
T ss_pred ---ccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHH---HHhccC----CCChhh-cccC---CC
Confidence 4443 6889999999999999999999998754432110000 000000 000000 0011 12
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHHHHHhhhcCC
Q 036334 586 VQLLQIAMGCVSTVPDQRPAMQEVVRMIENMNRGE 620 (654)
Q Consensus 586 ~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 620 (654)
.++.+++.+||+.||++| |+.|+++.|+++....
T Consensus 234 ~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~ 267 (286)
T 3uqc_A 234 FQISAVAARSVQGDGGIR-SASTLLNLMQQATAVA 267 (286)
T ss_dssp HHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccC
Confidence 346778889999999999 9999999999998654
No 243
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=7e-37 Score=317.39 Aligned_cols=243 Identities=20% Similarity=0.309 Sum_probs=173.0
Q ss_pred HhhccccccCceeEEEEEec-CCcEEEEEEecccccCH---HHHHHHHHHHhccCCCccccccEEEEeCCceEEEEEecC
Q 036334 349 ASAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVAVGK---REFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYMP 424 (654)
Q Consensus 349 ~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~---~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~ 424 (654)
...+.||+|+||.||+|... +|+.||||++....... +.+.++..+++.++||||+++++++.+++..++||||+
T Consensus 28 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~- 106 (318)
T 2dyl_A 28 ENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM- 106 (318)
T ss_dssp EEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC-
T ss_pred cccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEecc-
Confidence 34578999999999999975 68999999997653322 23334445678889999999999999999999999999
Q ss_pred CCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcc-CCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC---
Q 036334 425 AGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS-GKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT--- 500 (654)
Q Consensus 425 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~--- 500 (654)
++.+..+.... ...+++..++.++.|++.||+|||++ + |+||||||+||+++.++.+||+|||++......
T Consensus 107 ~~~~~~l~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 181 (318)
T 2dyl_A 107 GTCAEKLKKRM----QGPIPERILGKMTVAIVKALYYLKEKHG-VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAK 181 (318)
T ss_dssp SEEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCGGGEEECTTSCEEECCCTTC---------
T ss_pred CCcHHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHhhCC-EEeCCCCHHHEEECCCCCEEEEECCCchhccCCccc
Confidence 55665555422 24589999999999999999999985 7 999999999999999999999999998765433
Q ss_pred CCCCccccccCccccC-----CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhh
Q 036334 501 TPPTRVAGYRAPEVVE-----TRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVEL 575 (654)
Q Consensus 501 ~~~~~~~~y~aPE~~~-----~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 575 (654)
....++..|+|||++. ...++.++|||||||++|||++|+.||..... ....+......... ..
T Consensus 182 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~~~~~~~~~~~~------~~ 250 (318)
T 2dyl_A 182 DRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKT-----DFEVLTKVLQEEPP------LL 250 (318)
T ss_dssp -----CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCS-----HHHHHHHHHHSCCC------CC
T ss_pred cccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCc-----cHHHHHHHhccCCC------CC
Confidence 2345677899999984 45788999999999999999999999974221 11222222221110 00
Q ss_pred hccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 036334 576 MRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVR 611 (654)
Q Consensus 576 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 611 (654)
... .....++.+++.+||+.||.+||+++|+++
T Consensus 251 ~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 251 PGH---MGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp CSS---SCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred Ccc---CCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 000 112235677888999999999999999976
No 244
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.1e-37 Score=319.36 Aligned_cols=234 Identities=23% Similarity=0.390 Sum_probs=184.6
Q ss_pred HhhccccccCceeEEEEEe-cCCcEEEEEEeccccc-------CHHHHHHHHHHHhcc----CCCccccccEEEEeCCce
Q 036334 349 ASAEVLGKGSVGTSYKAVL-EEGTTVVVKRLKEVAV-------GKREFEMQMEVLGKI----KHDNVVPLRAFYYSKDEK 416 (654)
Q Consensus 349 ~~~~~lg~G~fg~Vy~~~~-~~g~~vavK~~~~~~~-------~~~~~~~e~~~l~~l----~hpniv~l~~~~~~~~~~ 416 (654)
.+.+.||+|+||.||+|.. .+++.||||+++.... ....+.+|+.++.++ +||||+++++++.+.+..
T Consensus 34 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~~~ 113 (312)
T 2iwi_A 34 RLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGF 113 (312)
T ss_dssp EEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----C
T ss_pred EEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCCeE
Confidence 3467899999999999985 4688999999975432 223456788888888 899999999999999999
Q ss_pred EEEEEe-cCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEEC-CCCCeEEeccCCC
Q 036334 417 LLVYDY-MPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLR-PDHDACVSDFGLN 494 (654)
Q Consensus 417 ~lv~e~-~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~-~~~~~kl~Dfgla 494 (654)
++|||| +.+++|.+++.. ...+++..++.++.|++.||+|||+++ |+||||||+||+++ .++.+||+|||++
T Consensus 114 ~~v~e~~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~kl~dfg~~ 187 (312)
T 2iwi_A 114 MLVLERPLPAQDLFDYITE-----KGPLGEGPSRCFFGQVVAAIQHCHSRG-VVHRDIKDENILIDLRRGCAKLIDFGSG 187 (312)
T ss_dssp EEEEECCSSEEEHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHHT-EECCCCSGGGEEEETTTTEEEECCCSSC
T ss_pred EEEEEecCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCChhhEEEeCCCCeEEEEEcchh
Confidence 999999 789999999974 235899999999999999999999998 99999999999999 7899999999998
Q ss_pred CCcCCC--CCCCccccccCccccCCCCCC-cchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhh
Q 036334 495 PLFGNT--TPPTRVAGYRAPEVVETRKVT-FKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVF 571 (654)
Q Consensus 495 ~~~~~~--~~~~~~~~y~aPE~~~~~~~~-~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 571 (654)
...... ....++..|+|||++.+..+. .++||||||+++|||++|+.||.... .......
T Consensus 188 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------------~~~~~~~----- 250 (312)
T 2iwi_A 188 ALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ------------EILEAEL----- 250 (312)
T ss_dssp EECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------------HHHHTCC-----
T ss_pred hhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH------------HHhhhcc-----
Confidence 876543 334567789999998776664 58999999999999999999996421 0111000
Q ss_pred hHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 036334 572 DVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVRM 612 (654)
Q Consensus 572 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 612 (654)
........++.+++.+||+.||++|||++|+++.
T Consensus 251 -------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 251 -------HFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp -------CCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred -------CCcccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0011122356778889999999999999999863
No 245
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.4e-36 Score=328.28 Aligned_cols=238 Identities=23% Similarity=0.339 Sum_probs=178.8
Q ss_pred hccccccCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHhcc-CCCccccccEEEEeCCceEEEEEecCCCchh
Q 036334 351 AEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKI-KHDNVVPLRAFYYSKDEKLLVYDYMPAGSLS 429 (654)
Q Consensus 351 ~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e~~~~g~L~ 429 (654)
.++||+|+||+||.....+|+.||||++..... ..+.+|+++++++ +||||+++++++.+.+..++||||++ |+|.
T Consensus 29 ~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~--~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-g~L~ 105 (432)
T 3p23_A 29 KDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF--SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-ATLQ 105 (432)
T ss_dssp EEEEEECGGGCEEEEEESSSSEEEEEEECTTTE--EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-EEHH
T ss_pred CCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH--HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-CCHH
Confidence 478999999997766666799999999865432 2356799999999 79999999999999999999999996 6999
Q ss_pred hhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCC-----CCeEEeccCCCCCcCCC----
Q 036334 430 ALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPD-----HDACVSDFGLNPLFGNT---- 500 (654)
Q Consensus 430 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~-----~~~kl~Dfgla~~~~~~---- 500 (654)
+++.... ....+..++.++.||+.||+|||+.+ |+||||||+|||++.+ ..+||+|||++......
T Consensus 106 ~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~ 180 (432)
T 3p23_A 106 EYVEQKD----FAHLGLEPITLLQQTTSGLAHLHSLN-IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSF 180 (432)
T ss_dssp HHHHSSS----CCCCSSCHHHHHHHHHHHHHHHHHTT-CCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-------
T ss_pred HHHHhcC----CCccchhHHHHHHHHHHHHHHHHHCc-CEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcce
Confidence 9997543 22444556789999999999999998 9999999999999532 35789999998766432
Q ss_pred ---CCCCccccccCccccC---CCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhH
Q 036334 501 ---TPPTRVAGYRAPEVVE---TRKVTFKSDVYSFGVLLLELLT-GKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDV 573 (654)
Q Consensus 501 ---~~~~~~~~y~aPE~~~---~~~~~~~~DvwslGvil~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 573 (654)
....+|..|+|||++. ...++.++|||||||++|||++ |..||..... ....... .......
T Consensus 181 ~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~-------~~~~~~~-~~~~~~~--- 249 (432)
T 3p23_A 181 SRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQ-------RQANILL-GACSLDC--- 249 (432)
T ss_dssp -----CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTT-------HHHHHHT-TCCCCTT---
T ss_pred eeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhH-------HHHHHHh-ccCCccc---
Confidence 2345788899999997 4567889999999999999999 8999854221 1111111 1100000
Q ss_pred hhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 036334 574 ELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVVR 611 (654)
Q Consensus 574 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 611 (654)
..........+.+++.+||+.||++|||++|+++
T Consensus 250 ----~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 250 ----LHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp ----SCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ----cCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 0111122334667888999999999999999983
No 246
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.2e-36 Score=348.25 Aligned_cols=234 Identities=20% Similarity=0.267 Sum_probs=190.3
Q ss_pred hhccccccCceeEEEEEec--CCcEEEEEEecccc--cCHHHHHHHHHHHhccCCCccccccEEEEeCCc-----eEEEE
Q 036334 350 SAEVLGKGSVGTSYKAVLE--EGTTVVVKRLKEVA--VGKREFEMQMEVLGKIKHDNVVPLRAFYYSKDE-----KLLVY 420 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~--~g~~vavK~~~~~~--~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~-----~~lv~ 420 (654)
+.+.||+|+||+||+|.+. +|+.||||++.... .....+.+|++++++++||||+++++++...+. .|+||
T Consensus 84 i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv~ 163 (681)
T 2pzi_A 84 VKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVM 163 (681)
T ss_dssp EEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEEEE
T ss_pred EEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEEEE
Confidence 3578999999999999975 58999999986542 234568899999999999999999999987665 69999
Q ss_pred EecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC
Q 036334 421 DYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT 500 (654)
Q Consensus 421 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~ 500 (654)
||+++++|.+++.. .+++..++.++.||+.||+|||+++ |+||||||+|||++.+ .+||+|||++......
T Consensus 164 E~~~g~~L~~~~~~-------~l~~~~~~~~~~qi~~aL~~lH~~g-iiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~~ 234 (681)
T 2pzi_A 164 EYVGGQSLKRSKGQ-------KLPVAEAIAYLLEILPALSYLHSIG-LVYNDLKPENIMLTEE-QLKLIDLGAVSRINSF 234 (681)
T ss_dssp ECCCCEECC----C-------CCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECSS-CEEECCCTTCEETTCC
T ss_pred EeCCCCcHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHHHCC-CeecccChHHeEEeCC-cEEEEecccchhcccC
Confidence 99999999987752 5899999999999999999999998 9999999999999975 8999999999888776
Q ss_pred CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccCC
Q 036334 501 TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHN 580 (654)
Q Consensus 501 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 580 (654)
....+|++|+|||++.+. ++.++|||||||++|||++|..||......... .. ..
T Consensus 235 ~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~~---------------~~---------~~ 289 (681)
T 2pzi_A 235 GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDGLP---------------ED---------DP 289 (681)
T ss_dssp SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSSCC---------------TT---------CH
T ss_pred CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCccccccccc---------------cc---------cc
Confidence 667789999999998765 489999999999999999999887643211100 00 00
Q ss_pred hHHHHHHHHHHHhhccCCCCCCCC-CHHHHHHHHHhhh
Q 036334 581 IEEEMVQLLQIAMGCVSTVPDQRP-AMQEVVRMIENMN 617 (654)
Q Consensus 581 ~~~~~~~l~~l~~~cl~~dP~~RP-s~~evl~~L~~~~ 617 (654)
.......+.+++.+||+.||++|| +++++.+.|..+.
T Consensus 290 ~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 327 (681)
T 2pzi_A 290 VLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVL 327 (681)
T ss_dssp HHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred ccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHH
Confidence 011223577888899999999999 5777878777664
No 247
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=1.3e-36 Score=327.03 Aligned_cols=235 Identities=19% Similarity=0.243 Sum_probs=173.1
Q ss_pred hccccccCceeEEEEEe-cCCcEEEEEEecccc----cCHHHHHHHHHHHhccCC-Cccccc---------c--------
Q 036334 351 AEVLGKGSVGTSYKAVL-EEGTTVVVKRLKEVA----VGKREFEMQMEVLGKIKH-DNVVPL---------R-------- 407 (654)
Q Consensus 351 ~~~lg~G~fg~Vy~~~~-~~g~~vavK~~~~~~----~~~~~~~~e~~~l~~l~h-pniv~l---------~-------- 407 (654)
.++||+|+||+||+|.+ .+|+.||||+++... ...+.+.+|+.+++.++| +|.... .
T Consensus 83 ~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (413)
T 3dzo_A 83 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQK 162 (413)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC-
T ss_pred ecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCCC
Confidence 46899999999999995 468999999987432 234678899999999977 321111 1
Q ss_pred ----EEEEe-----CCceEEEEEecCCCchhhhhccCC--CCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCC
Q 036334 408 ----AFYYS-----KDEKLLVYDYMPAGSLSALLHGSR--GSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKAS 476 (654)
Q Consensus 408 ----~~~~~-----~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~ 476 (654)
.++.. ....+++|+++ +++|.+++.... ......+++..++.++.|+++||+|||+++ |+||||||+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-iiHrDiKp~ 240 (413)
T 3dzo_A 163 KKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG-LVHTYLRPV 240 (413)
T ss_dssp --------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGG
T ss_pred CccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCcccc
Confidence 11111 12356777766 689999884210 012345889999999999999999999998 999999999
Q ss_pred cEEECCCCCeEEeccCCCCCcCCC-CCCCccccccCcccc----------CCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 036334 477 NILLRPDHDACVSDFGLNPLFGNT-TPPTRVAGYRAPEVV----------ETRKVTFKSDVYSFGVLLLELLTGKAPNQA 545 (654)
Q Consensus 477 NIll~~~~~~kl~Dfgla~~~~~~-~~~~~~~~y~aPE~~----------~~~~~~~~~DvwslGvil~el~tg~~pf~~ 545 (654)
|||++.++.+||+|||++...... ....+ ..|+|||++ ....++.++|||||||++|||++|+.||..
T Consensus 241 NILl~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~ 319 (413)
T 3dzo_A 241 DIVLDQRGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTD 319 (413)
T ss_dssp GEEECTTCCEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCT
T ss_pred eEEEecCCeEEEEeccceeecCCccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 999999999999999998766543 23445 889999999 556688999999999999999999999976
Q ss_pred CCCCCCCChhHHHHHHhhhchhhhhhhHhhhccCChHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 036334 546 SLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCVSTVPDQRPAMQEVV 610 (654)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl 610 (654)
....+... .++. ..... ..++.+++.+||+.||++||++.+++
T Consensus 320 ~~~~~~~~---------------~~~~----~~~~~---~~~~~~li~~~l~~dP~~Rpt~~~~l 362 (413)
T 3dzo_A 320 DAALGGSE---------------WIFR----SCKNI---PQPVRALLEGFLRYPKEDRLLPLQAM 362 (413)
T ss_dssp TGGGSCSG---------------GGGS----SCCCC---CHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred cchhhhHH---------------HHHh----hcccC---CHHHHHHHHHHccCChhhCcCHHHHH
Confidence 43322110 0110 11111 13577788899999999999976664
No 248
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=1.6e-36 Score=338.52 Aligned_cols=263 Identities=22% Similarity=0.294 Sum_probs=196.6
Q ss_pred HhhccccccCceeEEEEEec-CCcEEEEEEecccc--cCHHHHHHHHHHHhccCCCccccccEEEEe------CCceEEE
Q 036334 349 ASAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVA--VGKREFEMQMEVLGKIKHDNVVPLRAFYYS------KDEKLLV 419 (654)
Q Consensus 349 ~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~e~~~l~~l~hpniv~l~~~~~~------~~~~~lv 419 (654)
.+.+.||+|+||.||+|... +|+.||||+++... ...+.+.+|++++++++||||+++++++.. ++..++|
T Consensus 17 ~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~LV 96 (676)
T 3qa8_A 17 EMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLA 96 (676)
T ss_dssp CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSCCCE
T ss_pred EEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeEEEE
Confidence 45688999999999999864 58999999987542 234568899999999999999999998765 5677999
Q ss_pred EEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCC---eEEeccCCCCC
Q 036334 420 YDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHD---ACVSDFGLNPL 496 (654)
Q Consensus 420 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~---~kl~Dfgla~~ 496 (654)
|||+++|+|.+++.... ....+++..++.++.|++.||+|||+.+ |+||||||+||+++.++. +||+|||++..
T Consensus 97 mEy~~ggsL~~~L~~~~--~~~~lse~~i~~I~~QLl~aL~yLHs~g-IVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~ 173 (676)
T 3qa8_A 97 MEYCEGGDLRKYLNQFE--NCCGLKEGPIRTLLSDISSALRYLHENR-IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKE 173 (676)
T ss_dssp EECCSSCBHHHHHHSSS--CTTCCCSSHHHHHHHHHHHHHHHHHHTT-BCCCCCCSTTEEEECCSSSCEEEECSCCCCCB
T ss_pred EEeCCCCCHHHHHHhcc--cCCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCCHHHeEeecCCCceeEEEcccccccc
Confidence 99999999999998543 2335889999999999999999999998 999999999999997765 89999999987
Q ss_pred cCCC---CCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhh--------hc
Q 036334 497 FGNT---TPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVR--------EE 565 (654)
Q Consensus 497 ~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~--------~~ 565 (654)
.... ....++..|+|||++.+..++.++|||||||++|||++|+.||..... ...|...... ..
T Consensus 174 ~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~-----~~~~~~~i~~~~~~~~~~~~ 248 (676)
T 3qa8_A 174 LDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ-----PVQWHGKVREKSNEHIVVYD 248 (676)
T ss_dssp TTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCH-----HHHSSTTCC------CCSCC
T ss_pred cccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccc-----hhhhhhhhhcccchhhhhhh
Confidence 6543 234567889999999999999999999999999999999999965311 0000000000 00
Q ss_pred hhhhh--hhHhhhc-cCChHHHHHHHHHHHhhccCCCCCCCCCHHH-----HHHHHHhhhcC
Q 036334 566 WTAEV--FDVELMR-YHNIEEEMVQLLQIAMGCVSTVPDQRPAMQE-----VVRMIENMNRG 619 (654)
Q Consensus 566 ~~~~~--~~~~~~~-~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~e-----vl~~L~~~~~~ 619 (654)
..... +...... ..........+.+++.+||..||++|||++| ..+.++++...
T Consensus 249 ~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~~ 310 (676)
T 3qa8_A 249 DLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSL 310 (676)
T ss_dssp CCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHCC
T ss_pred hhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHhc
Confidence 00000 0000000 0112234456788888999999999999987 45666666543
No 249
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=5.1e-35 Score=300.95 Aligned_cols=225 Identities=19% Similarity=0.256 Sum_probs=172.6
Q ss_pred ccccccCceeEEEEEe-cCCcEEEEEEecccccCHHHHHHHHHHH-hccCCCccccccEEEEe----CCceEEEEEecCC
Q 036334 352 EVLGKGSVGTSYKAVL-EEGTTVVVKRLKEVAVGKREFEMQMEVL-GKIKHDNVVPLRAFYYS----KDEKLLVYDYMPA 425 (654)
Q Consensus 352 ~~lg~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~e~~~l-~~l~hpniv~l~~~~~~----~~~~~lv~e~~~~ 425 (654)
++||+|+||.||+|.. .+++.||+|+++. ...+.+|+.++ +..+||||+++++++.. ....++||||+++
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~ 99 (299)
T 3m2w_A 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQD----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDG 99 (299)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEC----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCCS
T ss_pred cccccCCCeEEEEEEEcCCCcEEEEEEecc----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecCC
Confidence 6799999999999996 4689999999864 34567788887 56689999999999887 6678999999999
Q ss_pred CchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECC---CCCeEEeccCCCCCcCCCCC
Q 036334 426 GSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRP---DHDACVSDFGLNPLFGNTTP 502 (654)
Q Consensus 426 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~---~~~~kl~Dfgla~~~~~~~~ 502 (654)
|+|.+++.... ...+++..++.++.|++.||+|||+++ |+||||||+||+++. ++.+||+|||++....
T Consensus 100 ~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~---- 171 (299)
T 3m2w_A 100 GELFSRIQDRG---DQAFTEREASEIMKSIGEAIQYLHSIN-IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT---- 171 (299)
T ss_dssp CBHHHHHHHCT---TCCCBHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESSSSTTCCEEECCCTTCEECT----
T ss_pred CcHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEEecCCCCCcEEEeccccccccc----
Confidence 99999997542 346999999999999999999999998 999999999999998 7889999999986433
Q ss_pred CCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccCChH
Q 036334 503 PTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIE 582 (654)
Q Consensus 503 ~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 582 (654)
+..++.++|||||||++|||++|+.||........... ................. .
T Consensus 172 --------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~---~ 227 (299)
T 3m2w_A 172 --------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPG-------MKTRIRMGQYEFPNPEW---S 227 (299)
T ss_dssp --------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CC-------SCCSSCTTCCSSCHHHH---T
T ss_pred --------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHH-------HHHHHhhccccCCchhc---c
Confidence 24577899999999999999999999975432211000 00000000000000000 1
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 036334 583 EEMVQLLQIAMGCVSTVPDQRPAMQEVVRM 612 (654)
Q Consensus 583 ~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 612 (654)
....++.+++.+||+.||++|||+.|+++.
T Consensus 228 ~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 228 EVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp TSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 123457778889999999999999999874
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=1.9e-35 Score=309.42 Aligned_cols=239 Identities=12% Similarity=0.151 Sum_probs=178.1
Q ss_pred HHHhhccccccCceeEEEEEecCCcEEEEEEeccccc---------CHHHHHHHHHHHhccC---------CCccccccE
Q 036334 347 LRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAV---------GKREFEMQMEVLGKIK---------HDNVVPLRA 408 (654)
Q Consensus 347 ~~~~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~---------~~~~~~~e~~~l~~l~---------hpniv~l~~ 408 (654)
.|.+.+.||+|+||+||+|.. +|+.||||+++.... ..+.+.+|+.++++++ ||||+++.+
T Consensus 21 ~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~ 99 (336)
T 2vuw_A 21 KLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNS 99 (336)
T ss_dssp HHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEE
T ss_pred cchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhcc
Confidence 456778999999999999998 589999999976432 2367889999988886 666666655
Q ss_pred EE-----------------Ee-------------CCceEEEEEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHH
Q 036334 409 FY-----------------YS-------------KDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARG 458 (654)
Q Consensus 409 ~~-----------------~~-------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~ 458 (654)
++ .+ .+..++||||+++|++.+.+.. ..+++..++.++.||+.|
T Consensus 100 ~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~------~~~~~~~~~~i~~qi~~a 173 (336)
T 2vuw_A 100 VHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT------KLSSLATAKSILHQLTAS 173 (336)
T ss_dssp EEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT------TCCCHHHHHHHHHHHHHH
T ss_pred eeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh------cCCCHHHHHHHHHHHHHH
Confidence 43 32 6789999999999987776642 348999999999999999
Q ss_pred HHHhh-ccCCeecCCCCCCcEEECCCC--------------------CeEEeccCCCCCcCCCCCCCccccccCccccCC
Q 036334 459 LAHLH-VSGKIVHGNIKASNILLRPDH--------------------DACVSDFGLNPLFGNTTPPTRVAGYRAPEVVET 517 (654)
Q Consensus 459 l~~LH-~~~~ivHrDlk~~NIll~~~~--------------------~~kl~Dfgla~~~~~~~~~~~~~~y~aPE~~~~ 517 (654)
|+||| +.+ |+||||||+|||++.++ .+||+|||+|+..... ...+|..|+|||++.+
T Consensus 174 L~~lH~~~~-ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-~~~gt~~y~aPE~~~g 251 (336)
T 2vuw_A 174 LAVAEASLR-FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-IVVFCDVSMDEDLFTG 251 (336)
T ss_dssp HHHHHHHHC-CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-EEECCCCTTCSGGGCC
T ss_pred HHHHHHhCC-EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-cEEEeecccChhhhcC
Confidence 99999 888 99999999999999887 8999999999876543 3467888999999987
Q ss_pred CCCCcchhHHHHHHH-HHHHHhCCCCCCCCCCCCCCChhHHHHHHhhhchhhhhhhHhhhccCChHHHHHHHHHHHhhcc
Q 036334 518 RKVTFKSDVYSFGVL-LLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMGCV 596 (654)
Q Consensus 518 ~~~~~~~DvwslGvi-l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl 596 (654)
.. +.++||||++++ .+++++|..||.. ..|.......-......... ...........++.+++.+||
T Consensus 252 ~~-~~~~Diwsl~~~~~~~~~~g~~p~~~---------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~dli~~~L 320 (336)
T 2vuw_A 252 DG-DYQFDIYRLMKKENNNRWGEYHPYSN---------VLWLHYLTDKMLKQMTFKTK-CNTPAMKQIKRKIQEFHRTML 320 (336)
T ss_dssp CS-SHHHHHHHHHHHHHTTCTTSCCTHHH---------HHHHHHHHHHHHHTCCCSSC-CCSHHHHHHHHHHHHHHHHGG
T ss_pred CC-ccceehhhhhCCCCcccccccCCCcc---------hhhhhHHHHhhhhhhccCcc-cchhhhhhcCHHHHHHHHHHh
Confidence 66 899999998777 7888889988742 11111111000000000000 000112344567888899999
Q ss_pred CCCCCCCCCHHHHH
Q 036334 597 STVPDQRPAMQEVV 610 (654)
Q Consensus 597 ~~dP~~RPs~~evl 610 (654)
+.| |++|++
T Consensus 321 ~~d-----sa~e~l 329 (336)
T 2vuw_A 321 NFS-----SATDLL 329 (336)
T ss_dssp GSS-----SHHHHH
T ss_pred ccC-----CHHHHH
Confidence 976 888887
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=1.6e-29 Score=281.46 Aligned_cols=180 Identities=18% Similarity=0.104 Sum_probs=126.7
Q ss_pred ccccCceeEEEEE-ecCCcEEEEEEecccc-----------cCHHHHHHHHHHHhcc-CCCccccccEEEEeCCceEEEE
Q 036334 354 LGKGSVGTSYKAV-LEEGTTVVVKRLKEVA-----------VGKREFEMQMEVLGKI-KHDNVVPLRAFYYSKDEKLLVY 420 (654)
Q Consensus 354 lg~G~fg~Vy~~~-~~~g~~vavK~~~~~~-----------~~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~~~~lv~ 420 (654)
.+.|++|.+..++ .--|+.|+||++.... ...++|.+|+++|+++ .|+||+++++++.+++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 5666776666544 2238899999996541 2235689999999999 6999999999999999999999
Q ss_pred EecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCC
Q 036334 421 DYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNT 500 (654)
Q Consensus 421 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~ 500 (654)
||++|++|.++|.. ..+++.. +|+.||+.||+|+|+++ ||||||||+|||++.+|.+||+|||+|+.....
T Consensus 322 Eyv~G~~L~d~i~~-----~~~l~~~---~I~~QIl~AL~ylH~~G-IIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~ 392 (569)
T 4azs_A 322 EKLPGRLLSDMLAA-----GEEIDRE---KILGSLLRSLAALEKQG-FWHDDVRPWNVMVDARQHARLIDFGSIVTTPQD 392 (569)
T ss_dssp ECCCSEEHHHHHHT-----TCCCCHH---HHHHHHHHHHHHHHHTT-CEESCCCGGGEEECTTSCEEECCCTTEESCC--
T ss_pred ecCCCCcHHHHHHh-----CCCCCHH---HHHHHHHHHHHHHHHCC-ceeccCchHhEEECCCCCEEEeecccCeeCCCC
Confidence 99999999999974 3456654 58899999999999998 999999999999999999999999999876543
Q ss_pred CC----CCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCC
Q 036334 501 TP----PTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPN 543 (654)
Q Consensus 501 ~~----~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf 543 (654)
.. ..+|++|||||++.+ .+..++|+||+|++++++.++..++
T Consensus 393 ~~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 393 CSWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp -CCSHHHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred CccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccchh
Confidence 22 346778999999975 4677899999999998887665543
No 252
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.95 E-value=1.8e-28 Score=253.68 Aligned_cols=186 Identities=33% Similarity=0.605 Sum_probs=170.5
Q ss_pred CCChhHHHHHHHHHhhCCCC-CCCCccCCCCCCC--ceeeEEcCCC--CeEEEeecCCCCccc--cCCcccccCCCCccE
Q 036334 25 SEPTQDKQALLAFLSRTPHK-NRVQWNASDSACN--WVGVECDANR--SFVYSLRLPGVGLVG--PIPPNTLGKLSQLRV 97 (654)
Q Consensus 25 ~~~~~~~~al~~~~~~~~~~-~~~~W~~~~~~C~--w~gv~C~~~~--~~v~~L~l~~~~l~~--~~~~~~l~~l~~L~~ 97 (654)
.|.++|++||++||.+..++ ...+|+.+++||. |.||+|+... ++|+.|+|++|++.| .+|+ .|+++++|++
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~~l~~W~~~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~-~l~~l~~L~~ 80 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPS-SLANLPYLNF 80 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCGGGTTCCTTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCG-GGGGCTTCSE
T ss_pred CCCHHHHHHHHHHHHhcCCcccccCCCCCCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccCh-hHhCCCCCCe
Confidence 46789999999999988654 3478988889998 9999998654 679999999999999 8887 6999999999
Q ss_pred EEecc-CCccCcCCCCCCCccccccccccccccccccchhhccccccceeccccccccccCCCccccccccCcccccccc
Q 036334 98 LSLRS-NRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLDLSSNNFSGKIPFDVNNLTHLTGLFLENNK 176 (654)
Q Consensus 98 L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 176 (654)
|+|++ |.+.+.+|..|+++++|++|+|++|++++.+|..|.++++|++|+|++|+|++.+|..+..+++|++|+|++|+
T Consensus 81 L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 160 (313)
T 1ogq_A 81 LYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNR 160 (313)
T ss_dssp EEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSC
T ss_pred eeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCc
Confidence 99995 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCC--CCC-CCCeEEccCCcccccCcccccCCC
Q 036334 177 FSGNLPSI--NPA-NLRDFNVSNNNLNGSIPATLSKFP 211 (654)
Q Consensus 177 l~~~~~~~--~~~-~L~~L~l~~N~l~g~~p~~~~~~~ 211 (654)
|++.+|.. .++ +|+.|+|++|+++|.+|..+..+.
T Consensus 161 l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~ 198 (313)
T 1ogq_A 161 ISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN 198 (313)
T ss_dssp CEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC
T ss_pred ccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc
Confidence 99888765 666 999999999999999999887764
No 253
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.93 E-value=2.3e-26 Score=254.69 Aligned_cols=177 Identities=16% Similarity=0.219 Sum_probs=144.4
Q ss_pred hccccccCceeEEEEEecCCcEEEEEEeccccc---------CHHHHHHHHHHHhccCCCccccccEEEEeCCceEEEEE
Q 036334 351 AEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAV---------GKREFEMQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYD 421 (654)
Q Consensus 351 ~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~---------~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 421 (654)
.++||+|+||+||+|... +..+++|+...... ..+++.+|++++++++||||+++..++...+..++|||
T Consensus 341 ~~~LG~G~fg~Vy~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE 419 (540)
T 3en9_A 341 EHLIGKGAEADIKRDSYL-DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMS 419 (540)
T ss_dssp -------CCEEEEEEECS-SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEE
T ss_pred CCEEeeCCCEEEEEEEEC-CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEE
Confidence 568999999999999544 78899998644321 13457899999999999999988888888888999999
Q ss_pred ecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCCC
Q 036334 422 YMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTT 501 (654)
Q Consensus 422 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 501 (654)
|+++++|.+++.. +..++.|+++||+|||+++ |+||||||+|||++. .+||+|||+++......
T Consensus 420 ~~~ggsL~~~l~~-------------~~~i~~qi~~aL~~LH~~g-IiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~ 483 (540)
T 3en9_A 420 YINGKLAKDVIED-------------NLDIAYKIGEIVGKLHKND-VIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDE 483 (540)
T ss_dssp CCCSEEHHHHSTT-------------CTHHHHHHHHHHHHHHHTT-EECTTCCTTSEEESS--SEEECCCTTCEECCCHH
T ss_pred CCCCCCHHHHHHH-------------HHHHHHHHHHHHHHHHHCc-CccCCCCHHHEEECC--eEEEEECccCEECCCcc
Confidence 9999999999973 4679999999999999998 999999999999998 99999999998876531
Q ss_pred -----------CCCccccccCccccCC--CCCCcchhHHHHHHHHHHHHhCCCCCC
Q 036334 502 -----------PPTRVAGYRAPEVVET--RKVTFKSDVYSFGVLLLELLTGKAPNQ 544 (654)
Q Consensus 502 -----------~~~~~~~y~aPE~~~~--~~~~~~~DvwslGvil~el~tg~~pf~ 544 (654)
...+|+.|||||++.. ..|+..+|+|+..+-..+-+.++.+|.
T Consensus 484 ~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 484 DKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred ccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 2356778999999976 668888999999999988888777663
No 254
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.92 E-value=9.5e-26 Score=261.60 Aligned_cols=183 Identities=27% Similarity=0.363 Sum_probs=124.6
Q ss_pred CChhHHHHHHHHHhhCCCC-CCCCccCCCCCCCceeeEEcCCCCeEEEeecCCCCcccc---CCc---------------
Q 036334 26 EPTQDKQALLAFLSRTPHK-NRVQWNASDSACNWVGVECDANRSFVYSLRLPGVGLVGP---IPP--------------- 86 (654)
Q Consensus 26 ~~~~~~~al~~~~~~~~~~-~~~~W~~~~~~C~w~gv~C~~~~~~v~~L~l~~~~l~~~---~~~--------------- 86 (654)
+.++|++||++||++..++ ...+|+.+++||+|.||+|+ .++|+.|+|+++++.|. +++
T Consensus 9 ~~~~~~~all~~k~~~~~~~~l~~W~~~~~~C~w~gv~C~--~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l~~~~ 86 (768)
T 3rgz_A 9 SLYREIHQLISFKDVLPDKNLLPDWSSNKNPCTFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSN 86 (768)
T ss_dssp CHHHHHHHHHHHHTTCSCTTSSTTCCTTSCGGGSTTEEEE--TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEEECTT
T ss_pred CCHHHHHHHHHHHhhCCCcccccCCCCCCCCcCCcceEEC--CCcEEEEECCCCCcCCccCccChhHhccCcccccCCcC
Confidence 4578999999999987554 45789888899999999998 46899999999999887 554
Q ss_pred -------ccccCCCCccEEEeccCCccCcCCC--CCCCccccccccccccccccccchhh-ccccccceecccccccccc
Q 036334 87 -------NTLGKLSQLRVLSLRSNRLSGEIPS--DFSNLTLLRSLYLQSNQFSGVFPASV-TRMNRLTRLDLSSNNFSGK 156 (654)
Q Consensus 87 -------~~l~~l~~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~l~~N~l~~~ 156 (654)
+.|+++++|++|||++|.++|.+|. .|+++++|++|+|++|++++.+|..+ .++++|++|+|++|++++.
T Consensus 87 ~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~ 166 (768)
T 3rgz_A 87 SHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGA 166 (768)
T ss_dssp SCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEEE
T ss_pred CCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccCCc
Confidence 2466777777777777777776666 67777777777777777776666554 5566666666666666655
Q ss_pred CCCc---cccccccCccccccccccCCCCCCCCCCCCeEEccCCcccccCcccccCCC
Q 036334 157 IPFD---VNNLTHLTGLFLENNKFSGNLPSINPANLRDFNVSNNNLNGSIPATLSKFP 211 (654)
Q Consensus 157 ~p~~---~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~~~ 211 (654)
.|.. +.++++|++|++++|++++.++...+++|++|+|++|.+++.+|. +++++
T Consensus 167 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~ 223 (768)
T 3rgz_A 167 NVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCS 223 (768)
T ss_dssp THHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCC
T ss_pred CChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCC
Confidence 5443 445555555555555555444444455555555555555554444 44333
No 255
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.91 E-value=1.4e-25 Score=254.42 Aligned_cols=184 Identities=25% Similarity=0.390 Sum_probs=157.7
Q ss_pred ChhHHHHHHHHHhhCCCCCC----------CCccCCCCCCCc---eeeEEcCCCCeEEEeecCCCCccccCCcccccCCC
Q 036334 27 PTQDKQALLAFLSRTPHKNR----------VQWNASDSACNW---VGVECDANRSFVYSLRLPGVGLVGPIPPNTLGKLS 93 (654)
Q Consensus 27 ~~~~~~al~~~~~~~~~~~~----------~~W~~~~~~C~w---~gv~C~~~~~~v~~L~l~~~~l~~~~~~~~l~~l~ 93 (654)
...|+.||++|+.+.....+ .+|+.+.+||.| .||+|+.. ++|+.|+|+++++.|.+|+ .|++|+
T Consensus 28 ~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c~w~~~~GV~C~~~-~~V~~L~L~~~~l~g~lp~-~l~~L~ 105 (636)
T 4eco_A 28 YIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELDMWGAQPGVSLNSN-GRVTGLSLEGFGASGRVPD-AIGQLT 105 (636)
T ss_dssp HHHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGGGTTCCTTEEECTT-CCEEEEECTTSCCEEEECG-GGGGCT
T ss_pred HHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCcccccCCCCeEEcCC-CCEEEEEecCcccCCcCCh-HHhcCc
Confidence 35699999999888754332 279988899999 99999865 6899999999999999998 699999
Q ss_pred CccEEEeccCC---------------------------------------------------------------------
Q 036334 94 QLRVLSLRSNR--------------------------------------------------------------------- 104 (654)
Q Consensus 94 ~L~~L~Ls~N~--------------------------------------------------------------------- 104 (654)
+|++|+|++|.
T Consensus 106 ~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~ 185 (636)
T 4eco_A 106 ELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKD 185 (636)
T ss_dssp TCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCT
T ss_pred cceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchhh
Confidence 99999999984
Q ss_pred ---------ccCcCCCCCCCccccccccccccccccc-----------------cchhhc--cccccceecccccccccc
Q 036334 105 ---------LSGEIPSDFSNLTLLRSLYLQSNQFSGV-----------------FPASVT--RMNRLTRLDLSSNNFSGK 156 (654)
Q Consensus 105 ---------l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-----------------~p~~~~--~l~~L~~L~l~~N~l~~~ 156 (654)
|+| +|..|+++++|++|+|++|+|+|. +|..++ ++++|++|+|++|++.+.
T Consensus 186 l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~ 264 (636)
T 4eco_A 186 TQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTK 264 (636)
T ss_dssp TTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSS
T ss_pred hhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCcc
Confidence 445 788899999999999999999986 899988 999999999999999999
Q ss_pred CCCccccccccCcccccccc-ccC-CCCCC--CC------CCCCeEEccCCcccccCcc--cccCCCCcc
Q 036334 157 IPFDVNNLTHLTGLFLENNK-FSG-NLPSI--NP------ANLRDFNVSNNNLNGSIPA--TLSKFPQSS 214 (654)
Q Consensus 157 ~p~~~~~l~~L~~L~l~~N~-l~~-~~~~~--~~------~~L~~L~l~~N~l~g~~p~--~~~~~~~l~ 214 (654)
+|..++++++|++|+|++|+ |+| .+|.. .+ ++|+.|+|++|+++ .+|. .++++++|.
T Consensus 265 ~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~ 333 (636)
T 4eco_A 265 LPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLG 333 (636)
T ss_dssp CCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCC
T ss_pred ChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCC
Confidence 99999999999999999998 887 66643 33 88899999999988 8888 777766654
No 256
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.90 E-value=4.4e-25 Score=255.49 Aligned_cols=183 Identities=27% Similarity=0.418 Sum_probs=158.2
Q ss_pred CChhHHHHHHHHHhhCCCCCCCCccCCC-----CC--CCc------------eeeEEcCCCCeEEEeecCCCCccccCCc
Q 036334 26 EPTQDKQALLAFLSRTPHKNRVQWNASD-----SA--CNW------------VGVECDANRSFVYSLRLPGVGLVGPIPP 86 (654)
Q Consensus 26 ~~~~~~~al~~~~~~~~~~~~~~W~~~~-----~~--C~w------------~gv~C~~~~~~v~~L~l~~~~l~~~~~~ 86 (654)
+...|+.||++||.+..++ +|+.++ +| |+| .||+|+. .++|+.|+|+++++.|.+|+
T Consensus 266 ~~~~d~~ALl~~k~~l~~~---~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~-~~~V~~L~Ls~~~L~G~ip~ 341 (876)
T 4ecn_A 266 EYIKDYKALKAIWEALDGK---NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDN-NGRVTGLSLAGFGAKGRVPD 341 (876)
T ss_dssp HHHHHHHHHHHHHHHTTGG---GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECT-TSCEEEEECTTTCCEEEECG
T ss_pred cchHHHHHHHHHHHHcCCC---CCCcCCCcccccCCccccccccccccccCcCceEecC-CCCEEEEECccCCCCCcCch
Confidence 3467999999999998654 787544 55 999 9999986 46799999999999999998
Q ss_pred ccccCCCCccEEEe-ccCCccCc---------------------------------------------------------
Q 036334 87 NTLGKLSQLRVLSL-RSNRLSGE--------------------------------------------------------- 108 (654)
Q Consensus 87 ~~l~~l~~L~~L~L-s~N~l~~~--------------------------------------------------------- 108 (654)
.|++|++|++|+| ++|.++|.
T Consensus 342 -~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~~ 420 (876)
T 4ecn_A 342 -AIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKD 420 (876)
T ss_dssp -GGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCCC
T ss_pred -HHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccccccc
Confidence 6999999999999 77765544
Q ss_pred -------------------CCCCCCCcccccccccccccccc-----------------ccchhhc--cccccceecccc
Q 036334 109 -------------------IPSDFSNLTLLRSLYLQSNQFSG-----------------VFPASVT--RMNRLTRLDLSS 150 (654)
Q Consensus 109 -------------------~p~~~~~l~~L~~L~Ls~N~l~~-----------------~~p~~~~--~l~~L~~L~l~~ 150 (654)
+|..|++|++|++|+|++|+|+| .+|..++ ++++|++|+|++
T Consensus 421 ~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~ 500 (876)
T 4ecn_A 421 SRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYN 500 (876)
T ss_dssp CCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEES
T ss_pred cccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcC
Confidence 78889999999999999999998 3899987 999999999999
Q ss_pred ccccccCCCccccccccCcccccccc-ccC-CCCCC---------CCCCCCeEEccCCcccccCcc--cccCCCCcc
Q 036334 151 NNFSGKIPFDVNNLTHLTGLFLENNK-FSG-NLPSI---------NPANLRDFNVSNNNLNGSIPA--TLSKFPQSS 214 (654)
Q Consensus 151 N~l~~~~p~~~~~l~~L~~L~l~~N~-l~~-~~~~~---------~~~~L~~L~l~~N~l~g~~p~--~~~~~~~l~ 214 (654)
|++.+.+|..|.+|++|+.|+|++|+ |++ .+|.. .+++|+.|+|++|+|+ .+|. .|.++++|.
T Consensus 501 N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~ 576 (876)
T 4ecn_A 501 CPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLG 576 (876)
T ss_dssp CTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCC
T ss_pred CCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCC
Confidence 99999999999999999999999998 888 56542 4569999999999999 8998 787776654
No 257
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.88 E-value=5.8e-23 Score=208.57 Aligned_cols=139 Identities=19% Similarity=0.255 Sum_probs=114.9
Q ss_pred hccccccCceeEEEEEecCCcEEEEEEeccccc-------------------CHHHHHHHHHHHhccCCCccccccEEEE
Q 036334 351 AEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAV-------------------GKREFEMQMEVLGKIKHDNVVPLRAFYY 411 (654)
Q Consensus 351 ~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~-------------------~~~~~~~e~~~l~~l~hpniv~l~~~~~ 411 (654)
.+.||+|+||.||+|...+|+.||+|+++.... ....+.+|++++++++ | +++.+++.
T Consensus 95 ~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~~ 171 (282)
T 1zar_A 95 GKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVYA 171 (282)
T ss_dssp EEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEEE
T ss_pred cCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEEe
Confidence 478999999999999997799999999964321 2356889999999998 5 77777654
Q ss_pred eCCceEEEEEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCCeEEecc
Q 036334 412 SKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHDACVSDF 491 (654)
Q Consensus 412 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Df 491 (654)
. +..++||||+++|+|.+ +.. .....++.|++.||+|||+.+ |+||||||+|||++ ++.+||+||
T Consensus 172 ~-~~~~lvmE~~~g~~L~~-l~~-----------~~~~~i~~qi~~~l~~lH~~g-iiHrDlkp~NILl~-~~~vkl~DF 236 (282)
T 1zar_A 172 W-EGNAVLMELIDAKELYR-VRV-----------ENPDEVLDMILEEVAKFYHRG-IVHGDLSQYNVLVS-EEGIWIIDF 236 (282)
T ss_dssp E-ETTEEEEECCCCEEGGG-CCC-----------SCHHHHHHHHHHHHHHHHHTT-EECSCCSTTSEEEE-TTEEEECCC
T ss_pred c-cceEEEEEecCCCcHHH-cch-----------hhHHHHHHHHHHHHHHHHHCC-CEeCCCCHHHEEEE-CCcEEEEEC
Confidence 4 56799999999999998 531 124579999999999999998 99999999999999 999999999
Q ss_pred CCCCCcCCCCCCCccccccCccccC
Q 036334 492 GLNPLFGNTTPPTRVAGYRAPEVVE 516 (654)
Q Consensus 492 gla~~~~~~~~~~~~~~y~aPE~~~ 516 (654)
|++... ..|+|||++.
T Consensus 237 G~a~~~---------~~~~a~e~l~ 252 (282)
T 1zar_A 237 PQSVEV---------GEEGWREILE 252 (282)
T ss_dssp TTCEET---------TSTTHHHHHH
T ss_pred CCCeEC---------CCCCHHHHHH
Confidence 998643 3478999874
No 258
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.87 E-value=4.4e-23 Score=214.50 Aligned_cols=185 Identities=22% Similarity=0.326 Sum_probs=156.2
Q ss_pred CCChhHHHHHHHHHhhCC-CC-C-CCCcc----CCCCCCCceeeEEcC--------CCCeEEEeecCCCCccccCCcccc
Q 036334 25 SEPTQDKQALLAFLSRTP-HK-N-RVQWN----ASDSACNWVGVECDA--------NRSFVYSLRLPGVGLVGPIPPNTL 89 (654)
Q Consensus 25 ~~~~~~~~al~~~~~~~~-~~-~-~~~W~----~~~~~C~w~gv~C~~--------~~~~v~~L~l~~~~l~~~~~~~~l 89 (654)
.+..+|+.||++|+.... +. . ..+|. .+.++|.|.|+.|.. ...+|+.|+|++|++. .+|+ .+
T Consensus 23 ~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~-~l 100 (328)
T 4fcg_A 23 TALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPD-QA 100 (328)
T ss_dssp CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCS-CG
T ss_pred ccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcCh-hh
Confidence 355789999999998552 22 2 25783 466899999999952 3356999999999998 7877 48
Q ss_pred cCCCCccEEEeccCCccCcCCCCCCCccccccccccccccccccchhhccccccceeccccccccccCCCcccc------
Q 036334 90 GKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLDLSSNNFSGKIPFDVNN------ 163 (654)
Q Consensus 90 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~------ 163 (654)
+++++|++|+|++|.|+ .+|..|+++++|++|+|++|+++ .+|..+.++++|++|+|++|++.+.+|..+..
T Consensus 101 ~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~ 178 (328)
T 4fcg_A 101 FRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGE 178 (328)
T ss_dssp GGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCC
T ss_pred hhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhh
Confidence 88999999999999999 89999999999999999999999 88999999999999999999999999988765
Q ss_pred ---ccccCccccccccccCCCCCC-CCCCCCeEEccCCcccccCcccccCCCCcc
Q 036334 164 ---LTHLTGLFLENNKFSGNLPSI-NPANLRDFNVSNNNLNGSIPATLSKFPQSS 214 (654)
Q Consensus 164 ---l~~L~~L~l~~N~l~~~~~~~-~~~~L~~L~l~~N~l~g~~p~~~~~~~~l~ 214 (654)
+++|+.|+|++|+|+..+..+ .+++|+.|+|++|+++ .+|..+.++++|.
T Consensus 179 ~~~l~~L~~L~L~~n~l~~lp~~l~~l~~L~~L~L~~N~l~-~l~~~l~~l~~L~ 232 (328)
T 4fcg_A 179 HQGLVNLQSLRLEWTGIRSLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLE 232 (328)
T ss_dssp EEESTTCCEEEEEEECCCCCCGGGGGCTTCCEEEEESSCCC-CCCGGGGGCTTCC
T ss_pred hccCCCCCEEECcCCCcCcchHhhcCCCCCCEEEccCCCCC-cCchhhccCCCCC
Confidence 999999999999999444344 7899999999999999 5776777666543
No 259
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.86 E-value=2.7e-22 Score=232.57 Aligned_cols=162 Identities=37% Similarity=0.613 Sum_probs=139.2
Q ss_pred eEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCC------------------------------------
Q 036334 69 FVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSD------------------------------------ 112 (654)
Q Consensus 69 ~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~------------------------------------ 112 (654)
+++.|+|++|.+.|.+|. .++++++|++|+|++|.++|.+|..
T Consensus 515 ~L~~L~L~~N~l~~~~p~-~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (768)
T 3rgz_A 515 NLAILKLSNNSFSGNIPA-ELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNL 593 (768)
T ss_dssp TCCEEECCSSCCEEECCG-GGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEE
T ss_pred CCCEEECCCCcccCcCCH-HHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccc
Confidence 467777777777777776 4788888888888888877666643
Q ss_pred ----------------------------------CCCccccccccccccccccccchhhccccccceeccccccccccCC
Q 036334 113 ----------------------------------FSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLDLSSNNFSGKIP 158 (654)
Q Consensus 113 ----------------------------------~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 158 (654)
|+++++|+.|||++|+++|.+|..|+++++|+.|+|++|+|+|.+|
T Consensus 594 ~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip 673 (768)
T 3rgz_A 594 LEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIP 673 (768)
T ss_dssp EECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCC
T ss_pred cccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCC
Confidence 3345678889999999999999999999999999999999999999
Q ss_pred CccccccccCccccccccccCCCCCC--CCCCCCeEEccCCcccccCcc--cccCCCCccccCCCCCCCCCCCCCCC
Q 036334 159 FDVNNLTHLTGLFLENNKFSGNLPSI--NPANLRDFNVSNNNLNGSIPA--TLSKFPQSSFTGNLDLCGGPLPPCNP 231 (654)
Q Consensus 159 ~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~g~~p~--~~~~~~~l~~~~n~~~c~~~~~~C~~ 231 (654)
..++++++|+.|||++|+|+|.+|.. .+++|++|+|++|+|+|.||. .|..++...|.||+.+||.+..+|..
T Consensus 674 ~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~~C~~ 750 (768)
T 3rgz_A 674 DEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLPRCDP 750 (768)
T ss_dssp GGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSCCCCS
T ss_pred hHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCCcCCCC
Confidence 99999999999999999999999876 889999999999999999996 47788889999999999998888863
No 260
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.85 E-value=3.1e-21 Score=192.63 Aligned_cols=169 Identities=23% Similarity=0.285 Sum_probs=139.0
Q ss_pred CCCCceeeEEcCC------------------CCeEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCC
Q 036334 54 SACNWVGVECDAN------------------RSFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSN 115 (654)
Q Consensus 54 ~~C~w~gv~C~~~------------------~~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~ 115 (654)
+||.|.|++|... ...++.|+|++|++.+..+ ..|.++++|++|+|++|.|++..+..|.+
T Consensus 3 ~Cp~~~gC~C~~~~~~l~~~~~~l~~~p~~~~~~l~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 81 (251)
T 3m19_A 3 TCETVTGCTCNEGKKEVDCQGKSLDSVPSGIPADTEKLDLQSTGLATLSD-ATFRGLTKLTWLNLDYNQLQTLSAGVFDD 81 (251)
T ss_dssp -CHHHHSSEEEGGGTEEECTTCCCSSCCSCCCTTCCEEECTTSCCCCCCT-TTTTTCTTCCEEECTTSCCCCCCTTTTTT
T ss_pred cCCCCCceEcCCCCeEEecCCCCccccCCCCCCCCCEEEccCCCcCccCH-hHhcCcccCCEEECCCCcCCccCHhHhcc
Confidence 4677878888321 1247789999999986544 46899999999999999999888888999
Q ss_pred ccccccccccccccccccchhhccccccceeccccccccccCCCccccccccCccccccccccCCCCCC--CCCCCCeEE
Q 036334 116 LTLLRSLYLQSNQFSGVFPASVTRMNRLTRLDLSSNNFSGKIPFDVNNLTHLTGLFLENNKFSGNLPSI--NPANLRDFN 193 (654)
Q Consensus 116 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~ 193 (654)
+++|++|+|++|++++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|+|++.++.. .+++|+.|+
T Consensus 82 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 161 (251)
T 3m19_A 82 LTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLS 161 (251)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEE
Confidence 999999999999999888888899999999999999999777777889999999999999999888753 789999999
Q ss_pred ccCCcccccCcccccCCC---CccccCCCCCCC
Q 036334 194 VSNNNLNGSIPATLSKFP---QSSFTGNLDLCG 223 (654)
Q Consensus 194 l~~N~l~g~~p~~~~~~~---~l~~~~n~~~c~ 223 (654)
|++|+|++..+..|.+++ .+.+.+|+..|.
T Consensus 162 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 162 LSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 999999977666666555 456677877664
No 261
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.83 E-value=1.1e-20 Score=186.01 Aligned_cols=155 Identities=25% Similarity=0.299 Sum_probs=104.9
Q ss_pred CccCCCCCCCceeeEEcCCC---------CeEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCccc
Q 036334 48 QWNASDSACNWVGVECDANR---------SFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTL 118 (654)
Q Consensus 48 ~W~~~~~~C~w~gv~C~~~~---------~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 118 (654)
-|....+.|+|.+|.|++.. ..++.|+|++|.+.+..+. .|..+++|++|+|++|.|++..+..|.++++
T Consensus 11 ~~~~~~~~Cs~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~-~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~ 89 (229)
T 3e6j_A 11 AACPSQCSCSGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPG-VFDSLINLKELYLGSNQLGALPVGVFDSLTQ 89 (229)
T ss_dssp CCCCTTCEEETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTT-TTTTCTTCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred ccCCCCCEEeCCEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCHH-HhhCccCCcEEECCCCCCCCcChhhcccCCC
Confidence 45567788999999997532 2366677777777654443 5667777777777777776544455667777
Q ss_pred cccccccccccccccchhhccccccceeccccccccccCCCccccccccCccccccccccCCCCCC--CCCCCCeEEccC
Q 036334 119 LRSLYLQSNQFSGVFPASVTRMNRLTRLDLSSNNFSGKIPFDVNNLTHLTGLFLENNKFSGNLPSI--NPANLRDFNVSN 196 (654)
Q Consensus 119 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~ 196 (654)
|++|+|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++.++.. .+++|+.|+|++
T Consensus 90 L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 168 (229)
T 3e6j_A 90 LTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFG 168 (229)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred cCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeC
Confidence 777777777777665556667777777777777777 66666677777777777777777665543 566777777777
Q ss_pred CcccccCc
Q 036334 197 NNLNGSIP 204 (654)
Q Consensus 197 N~l~g~~p 204 (654)
|++.+..+
T Consensus 169 N~~~c~c~ 176 (229)
T 3e6j_A 169 NPWDCECR 176 (229)
T ss_dssp SCBCTTBG
T ss_pred CCccCCcc
Confidence 77765443
No 262
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.82 E-value=3.1e-20 Score=187.48 Aligned_cols=145 Identities=23% Similarity=0.322 Sum_probs=121.8
Q ss_pred eEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccccccccchhhccccccceecc
Q 036334 69 FVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLDL 148 (654)
Q Consensus 69 ~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 148 (654)
.++.|+|++|.+.+ +++..|.++++|++|+|++|.|+...+..|.++++|++|+|++|++++..+..|..+++|++|+|
T Consensus 38 ~l~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 116 (270)
T 2o6q_A 38 DTKKLDLQSNKLSS-LPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRL 116 (270)
T ss_dssp TCSEEECCSSCCSC-CCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEEC
T ss_pred CCCEEECcCCCCCe-eCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEEC
Confidence 37788999998875 55557999999999999999999666666789999999999999999877778899999999999
Q ss_pred ccccccccCCCccccccccCccccccccccCCCCCC--CCCCCCeEEccCCcccccCcccccCCCCcc
Q 036334 149 SSNNFSGKIPFDVNNLTHLTGLFLENNKFSGNLPSI--NPANLRDFNVSNNNLNGSIPATLSKFPQSS 214 (654)
Q Consensus 149 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~g~~p~~~~~~~~l~ 214 (654)
++|+|++..+..|..+++|++|+|++|+|++.++.. .+++|+.|+|++|++++..+..|.++++|.
T Consensus 117 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 184 (270)
T 2o6q_A 117 DRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELK 184 (270)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCC
T ss_pred CCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcC
Confidence 999999887778889999999999999999877753 788999999999999866666666555543
No 263
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.82 E-value=7e-21 Score=196.57 Aligned_cols=160 Identities=34% Similarity=0.616 Sum_probs=107.6
Q ss_pred CeEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCcc-ccccccccccccccccchhhcccccccee
Q 036334 68 SFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLT-LLRSLYLQSNQFSGVFPASVTRMNRLTRL 146 (654)
Q Consensus 68 ~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 146 (654)
.+++.|+|++|.+.+.+|. .|..+++|++|+|++|.|++.+|..|++++ +|++|+|++|++++.+|..+..++ |+.|
T Consensus 125 ~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L 202 (313)
T 1ogq_A 125 KTLVTLDFSYNALSGTLPP-SISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFV 202 (313)
T ss_dssp TTCCEEECCSSEEESCCCG-GGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEE
T ss_pred CCCCEEeCCCCccCCcCCh-HHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEE
Confidence 3477888888888877776 477888888888888888877787777776 777777777777777666666655 6666
Q ss_pred ccccccccccCCCccccc-----------------------cccCccccccccccCCCCCC--CCCCCCeEEccCCcccc
Q 036334 147 DLSSNNFSGKIPFDVNNL-----------------------THLTGLFLENNKFSGNLPSI--NPANLRDFNVSNNNLNG 201 (654)
Q Consensus 147 ~l~~N~l~~~~p~~~~~l-----------------------~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~g 201 (654)
+|++|++++.+|..+..+ ++|++|+|++|+|++.+|.. .+++|+.|+|++|+++|
T Consensus 203 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 282 (313)
T 1ogq_A 203 DLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCG 282 (313)
T ss_dssp ECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEE
T ss_pred ECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCcccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccc
Confidence 666666655555544444 45555555555555444443 55666666676676666
Q ss_pred cCccc--ccCCCCccccCCCCCCCCCCCCC
Q 036334 202 SIPAT--LSKFPQSSFTGNLDLCGGPLPPC 229 (654)
Q Consensus 202 ~~p~~--~~~~~~l~~~~n~~~c~~~~~~C 229 (654)
.+|.. +.++..+.+.+|+++||.|.+.|
T Consensus 283 ~ip~~~~l~~L~~l~l~~N~~lc~~p~~~C 312 (313)
T 1ogq_A 283 EIPQGGNLQRFDVSAYANNKCLCGSPLPAC 312 (313)
T ss_dssp ECCCSTTGGGSCGGGTCSSSEEESTTSSCC
T ss_pred cCCCCccccccChHHhcCCCCccCCCCCCC
Confidence 66653 33455566778888888776666
No 264
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.82 E-value=2.2e-20 Score=182.52 Aligned_cols=133 Identities=21% Similarity=0.224 Sum_probs=68.2
Q ss_pred EEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccccccccchhhccccccceeccc
Q 036334 70 VYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLDLS 149 (654)
Q Consensus 70 v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 149 (654)
++.|+|++|.+.+..+.+.|..+++|++|+|++|.|++..+..|.++++|++|+|++|+|++..|..|..+++|++|+|+
T Consensus 34 ~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 113 (220)
T 2v70_A 34 TAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLR 113 (220)
T ss_dssp CSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECT
T ss_pred CCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECC
Confidence 34455555555444343344555555555555555554444455555555555555555554444445555555555555
Q ss_pred cccccccCCCccccccccCccccccccccCCCCCC--CCCCCCeEEccCCccccc
Q 036334 150 SNNFSGKIPFDVNNLTHLTGLFLENNKFSGNLPSI--NPANLRDFNVSNNNLNGS 202 (654)
Q Consensus 150 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~g~ 202 (654)
+|+|++..|..|..+++|+.|+|++|+|++..|.. .+++|+.|+|++|++++.
T Consensus 114 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 114 SNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp TSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECS
T ss_pred CCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCC
Confidence 55555444555555555555555555555544432 445555555555555443
No 265
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.81 E-value=5.4e-20 Score=178.08 Aligned_cols=151 Identities=23% Similarity=0.306 Sum_probs=125.2
Q ss_pred CCCCCceeeEEcCCC---------CeEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCcccccccc
Q 036334 53 DSACNWVGVECDANR---------SFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLY 123 (654)
Q Consensus 53 ~~~C~w~gv~C~~~~---------~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 123 (654)
...|+|.+|.|+... .+++.|+|++|++.+ ++++.|..+++|++|+|++|.|++..+..|.++++|++|+
T Consensus 4 ~C~C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 82 (208)
T 2o6s_A 4 RCSCSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKS-LPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLN 82 (208)
T ss_dssp TCEEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCC-CCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCEECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCc-CChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEE
Confidence 345899999997532 348889999999874 5555688999999999999999976666788899999999
Q ss_pred ccccccccccchhhccccccceeccccccccccCCCccccccccCccccccccccCCCCCC--CCCCCCeEEccCCcccc
Q 036334 124 LQSNQFSGVFPASVTRMNRLTRLDLSSNNFSGKIPFDVNNLTHLTGLFLENNKFSGNLPSI--NPANLRDFNVSNNNLNG 201 (654)
Q Consensus 124 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~g 201 (654)
|++|++++..+..|..+++|++|+|++|+|++..+..+..+++|+.|+|++|+|++.++.. .+++|+.|+|++|++.+
T Consensus 83 Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 162 (208)
T 2o6s_A 83 LSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC 162 (208)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC
T ss_pred CCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec
Confidence 9999999777777888999999999999999777767888999999999999999877763 68889999999988876
Q ss_pred cCc
Q 036334 202 SIP 204 (654)
Q Consensus 202 ~~p 204 (654)
..|
T Consensus 163 ~~~ 165 (208)
T 2o6s_A 163 TCP 165 (208)
T ss_dssp CTT
T ss_pred CCC
Confidence 554
No 266
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.79 E-value=1.4e-19 Score=176.70 Aligned_cols=148 Identities=25% Similarity=0.293 Sum_probs=103.1
Q ss_pred eecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccccccccchhhccccccceecccccc
Q 036334 73 LRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLDLSSNN 152 (654)
Q Consensus 73 L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~ 152 (654)
++++++++. .+|.. +. ++|+.|+|++|.|++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+
T Consensus 16 v~c~~~~l~-~iP~~-l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~ 91 (220)
T 2v9t_B 16 VDCRGKGLT-EIPTN-LP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91 (220)
T ss_dssp EECTTSCCS-SCCSS-CC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSC
T ss_pred EEcCCCCcC-cCCCc-cC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCc
Confidence 344444553 34442 22 567788888888876666677778888888888888887777778888888888888888
Q ss_pred ccccCCCccccccccCccccccccccCCCCCC--CCCCCCeEEccCCcccccCcccccCCC---CccccCCCCCCCC
Q 036334 153 FSGKIPFDVNNLTHLTGLFLENNKFSGNLPSI--NPANLRDFNVSNNNLNGSIPATLSKFP---QSSFTGNLDLCGG 224 (654)
Q Consensus 153 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~g~~p~~~~~~~---~l~~~~n~~~c~~ 224 (654)
|+...+..|..+++|+.|+|++|+|++..+.. .+++|+.|+|++|+|++..+..|..++ .+.+.+|+..|.+
T Consensus 92 l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 168 (220)
T 2v9t_B 92 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDC 168 (220)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred CCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCC
Confidence 87555555677788888888888887776654 677788888888888766555555544 3456677777653
No 267
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.78 E-value=1.1e-19 Score=191.54 Aligned_cols=173 Identities=21% Similarity=0.220 Sum_probs=147.3
Q ss_pred CCCCCCceeeEEcCC---------CCeEEEeecCCCCccccCCccccc-CCCCccEEEeccCCccCcCCCCCCCcccccc
Q 036334 52 SDSACNWVGVECDAN---------RSFVYSLRLPGVGLVGPIPPNTLG-KLSQLRVLSLRSNRLSGEIPSDFSNLTLLRS 121 (654)
Q Consensus 52 ~~~~C~w~gv~C~~~---------~~~v~~L~l~~~~l~~~~~~~~l~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 121 (654)
....|.|..+.|..+ ...++.|+|++|.+.+ +++..|. ++++|++|+|++|.|++..+..|.++++|++
T Consensus 14 ~~C~C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~-l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~ 92 (361)
T 2xot_A 14 ANCLCASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSR-LRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRY 92 (361)
T ss_dssp TTCEEETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCE-ECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCE
T ss_pred CCCEECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCc-cChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCE
Confidence 334477888899753 1237789999999986 4444677 9999999999999999888888999999999
Q ss_pred ccccccccccccchhhccccccceeccccccccccCCCccccccccCccccccccccCCCCCC-----CCCCCCeEEccC
Q 036334 122 LYLQSNQFSGVFPASVTRMNRLTRLDLSSNNFSGKIPFDVNNLTHLTGLFLENNKFSGNLPSI-----NPANLRDFNVSN 196 (654)
Q Consensus 122 L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-----~~~~L~~L~l~~ 196 (654)
|+|++|+|++..+..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++.++.. .+++|+.|+|++
T Consensus 93 L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~ 172 (361)
T 2xot_A 93 LDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSS 172 (361)
T ss_dssp EECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCS
T ss_pred EECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCC
Confidence 999999999888888999999999999999999888999999999999999999999876653 489999999999
Q ss_pred CcccccCcccccCCC-----CccccCCCCCCCCC
Q 036334 197 NNLNGSIPATLSKFP-----QSSFTGNLDLCGGP 225 (654)
Q Consensus 197 N~l~g~~p~~~~~~~-----~l~~~~n~~~c~~~ 225 (654)
|+|++..+..+..++ .+.+.+|+..|+|.
T Consensus 173 N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~C~ 206 (361)
T 2xot_A 173 NKLKKLPLTDLQKLPAWVKNGLYLHNNPLECDCK 206 (361)
T ss_dssp SCCCCCCHHHHHHSCHHHHTTEECCSSCEECCHH
T ss_pred CCCCccCHHHhhhccHhhcceEEecCCCccCCcC
Confidence 999955446666664 47888999999764
No 268
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.78 E-value=6.9e-19 Score=171.84 Aligned_cols=150 Identities=21% Similarity=0.279 Sum_probs=134.1
Q ss_pred CCCCCCceeeEEcCCC---------CeEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCccccccc
Q 036334 52 SDSACNWVGVECDANR---------SFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSL 122 (654)
Q Consensus 52 ~~~~C~w~gv~C~~~~---------~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 122 (654)
+...|.|..|.|.+.. ..++.|+|++|++.+ +++..|..+++|++|+|++|.|++..|..|.++++|++|
T Consensus 7 ~~C~C~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~-i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L 85 (220)
T 2v9t_B 7 AACTCSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKV-IPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSL 85 (220)
T ss_dssp TTSEEETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCE-ECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEE
T ss_pred CCCEECCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCC-cCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEE
Confidence 3445889999997532 358999999999985 555579999999999999999998889999999999999
Q ss_pred cccccccccccchhhccccccceeccccccccccCCCccccccccCccccccccccCCCCCC--CCCCCCeEEccCCccc
Q 036334 123 YLQSNQFSGVFPASVTRMNRLTRLDLSSNNFSGKIPFDVNNLTHLTGLFLENNKFSGNLPSI--NPANLRDFNVSNNNLN 200 (654)
Q Consensus 123 ~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~ 200 (654)
+|++|+|+...+..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..+.. .+++|+.|+|++|++.
T Consensus 86 ~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 86 VLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred ECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 99999999776777899999999999999999988999999999999999999999988864 7899999999999997
Q ss_pred cc
Q 036334 201 GS 202 (654)
Q Consensus 201 g~ 202 (654)
..
T Consensus 166 c~ 167 (220)
T 2v9t_B 166 CD 167 (220)
T ss_dssp CS
T ss_pred CC
Confidence 54
No 269
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.77 E-value=3.4e-19 Score=178.50 Aligned_cols=134 Identities=17% Similarity=0.188 Sum_probs=103.2
Q ss_pred hccccccCceeEEEEEe-cCCcE--EEEEEecccccC-------------------------HHHHHHHHHHHhccCCCc
Q 036334 351 AEVLGKGSVGTSYKAVL-EEGTT--VVVKRLKEVAVG-------------------------KREFEMQMEVLGKIKHDN 402 (654)
Q Consensus 351 ~~~lg~G~fg~Vy~~~~-~~g~~--vavK~~~~~~~~-------------------------~~~~~~e~~~l~~l~hpn 402 (654)
.+.||+|+||.||+|.. .+|+. ||||+++..... ...+.+|+..+.++.|++
T Consensus 52 ~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 131 (258)
T 1zth_A 52 GGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEAG 131 (258)
T ss_dssp EEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhCC
Confidence 46799999999999997 67889 999997543111 125788999999998886
Q ss_pred cccccEEEEeCCceEEEEEecCC-C----chhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhh-ccCCeecCCCCCC
Q 036334 403 VVPLRAFYYSKDEKLLVYDYMPA-G----SLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLH-VSGKIVHGNIKAS 476 (654)
Q Consensus 403 iv~l~~~~~~~~~~~lv~e~~~~-g----~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH-~~~~ivHrDlk~~ 476 (654)
+....-+.. +..++||||+.+ | +|.++... .++..+..++.|++.+|.||| +.+ |+||||||+
T Consensus 132 i~~p~~~~~--~~~~lVmE~~g~~g~~~~~L~~~~~~--------~~~~~~~~i~~qi~~~l~~lH~~~g-ivHrDlkp~ 200 (258)
T 1zth_A 132 VSVPQPYTY--MKNVLLMEFIGEDELPAPTLVELGRE--------LKELDVEGIFNDVVENVKRLYQEAE-LVHADLSEY 200 (258)
T ss_dssp CCCCCEEEE--ETTEEEEECCEETTEECCBHHHHGGG--------GGGSCHHHHHHHHHHHHHHHHHTSC-EECSSCSTT
T ss_pred CCCCeEEEc--CCCEEEEEecCCCCCccccHHHHhhc--------cChHHHHHHHHHHHHHHHHHHHHCC-EEeCCCCHH
Confidence 532222222 367899999942 4 66665431 224457789999999999999 887 999999999
Q ss_pred cEEECCCCCeEEeccCCCCCc
Q 036334 477 NILLRPDHDACVSDFGLNPLF 497 (654)
Q Consensus 477 NIll~~~~~~kl~Dfgla~~~ 497 (654)
|||++. .++|+|||+|...
T Consensus 201 NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 201 NIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp SEEESS--SEEECCCTTCEET
T ss_pred HEEEcC--cEEEEECcccccC
Confidence 999998 9999999999754
No 270
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.77 E-value=7.7e-19 Score=171.52 Aligned_cols=160 Identities=16% Similarity=0.240 Sum_probs=134.4
Q ss_pred CCceeeEEcCCCCeEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCC-CCCCCccccccccccccccccccc
Q 036334 56 CNWVGVECDANRSFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIP-SDFSNLTLLRSLYLQSNQFSGVFP 134 (654)
Q Consensus 56 C~w~gv~C~~~~~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p 134 (654)
|. .++.|... .+++++|++. .+|.. + ...+++|+|++|.|++..| ..|.++++|++|+|++|+|++..+
T Consensus 5 CP-~~C~C~~~-----~l~~s~n~l~-~iP~~-~--~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~ 74 (220)
T 2v70_A 5 CP-EKCRCEGT-----TVDCSNQKLN-KIPEH-I--PQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEE 74 (220)
T ss_dssp CC-TTCEEETT-----EEECCSSCCS-SCCSC-C--CTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECT
T ss_pred CC-CCCEECCC-----EeEeCCCCcc-cCccC-C--CCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECH
Confidence 44 35667532 5778888886 46653 3 3457899999999997755 458999999999999999998888
Q ss_pred hhhccccccceeccccccccccCCCccccccccCccccccccccCCCCCC--CCCCCCeEEccCCcccccCcccccCCCC
Q 036334 135 ASVTRMNRLTRLDLSSNNFSGKIPFDVNNLTHLTGLFLENNKFSGNLPSI--NPANLRDFNVSNNNLNGSIPATLSKFPQ 212 (654)
Q Consensus 135 ~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~g~~p~~~~~~~~ 212 (654)
..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+|++..|.. .+++|+.|+|++|+|++..|..|..+++
T Consensus 75 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 154 (220)
T 2v70_A 75 GAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHS 154 (220)
T ss_dssp TTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTT
T ss_pred HHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCC
Confidence 89999999999999999999888888999999999999999999998765 8899999999999999888988876665
Q ss_pred ---ccccCCCCCCCCC
Q 036334 213 ---SSFTGNLDLCGGP 225 (654)
Q Consensus 213 ---l~~~~n~~~c~~~ 225 (654)
+.+.+|+..|.++
T Consensus 155 L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 155 LSTLNLLANPFNCNCY 170 (220)
T ss_dssp CCEEECCSCCEECSGG
T ss_pred CCEEEecCcCCcCCCc
Confidence 5677888887644
No 271
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.77 E-value=1.5e-18 Score=175.37 Aligned_cols=154 Identities=25% Similarity=0.281 Sum_probs=136.0
Q ss_pred CeEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccccccccchhhccccccceec
Q 036334 68 SFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLD 147 (654)
Q Consensus 68 ~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 147 (654)
.+++.|+|++|.+.+ ++ .+..+++|++|+|++|.+++..+..|.++++|++|+|++|++++..+..|..+++|++|+
T Consensus 63 ~~L~~L~l~~n~l~~-~~--~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 139 (272)
T 3rfs_A 63 PNVRYLALGGNKLHD-IS--ALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLN 139 (272)
T ss_dssp TTCCEEECTTSCCCC-CG--GGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCcEEECCCCCCCC-ch--hhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEE
Confidence 459999999999987 33 599999999999999999988888899999999999999999988888899999999999
Q ss_pred cccccccccCCCccccccccCccccccccccCCCCCC--CCCCCCeEEccCCcccccCcccccCCCC---ccccCCCCCC
Q 036334 148 LSSNNFSGKIPFDVNNLTHLTGLFLENNKFSGNLPSI--NPANLRDFNVSNNNLNGSIPATLSKFPQ---SSFTGNLDLC 222 (654)
Q Consensus 148 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~g~~p~~~~~~~~---l~~~~n~~~c 222 (654)
|++|+|++..+..+..+++|+.|++++|+|++.++.. .+++|+.|+|++|++++..|..+.++++ +.+.+|+..|
T Consensus 140 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 219 (272)
T 3rfs_A 140 LAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC 219 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccc
Confidence 9999999877777899999999999999999888865 7899999999999999887776666554 5567887776
Q ss_pred CC
Q 036334 223 GG 224 (654)
Q Consensus 223 ~~ 224 (654)
.+
T Consensus 220 ~~ 221 (272)
T 3rfs_A 220 TC 221 (272)
T ss_dssp CT
T ss_pred cC
Confidence 53
No 272
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.76 E-value=3.5e-19 Score=170.04 Aligned_cols=150 Identities=25% Similarity=0.364 Sum_probs=121.5
Q ss_pred EeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCC-CCCCccccccccccccccccccchhhccccccceecccc
Q 036334 72 SLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPS-DFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLDLSS 150 (654)
Q Consensus 72 ~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 150 (654)
.|+++++++ +.+|.. +. .+|++|+|++|.|++..+. .|.++++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 12 ~l~~s~~~l-~~ip~~-~~--~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 12 TVDCTGRGL-KEIPRD-IP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp EEECTTSCC-SSCCSC-CC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred EEEcCCCCc-CcCccC-CC--CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 467777777 467763 43 3899999999999976664 489999999999999999999999999999999999999
Q ss_pred ccccccCCCccccccccCccccccccccCCCCCC--CCCCCCeEEccCCcccccCccc-ccC-CCCccccCCCCCCCCC
Q 036334 151 NNFSGKIPFDVNNLTHLTGLFLENNKFSGNLPSI--NPANLRDFNVSNNNLNGSIPAT-LSK-FPQSSFTGNLDLCGGP 225 (654)
Q Consensus 151 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~g~~p~~-~~~-~~~l~~~~n~~~c~~~ 225 (654)
|+|++..+..|..+++|++|+|++|+|++.+|.. .+++|+.|+|++|++++..+-. +.. +....+.++...|+.|
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P 166 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAP 166 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSS
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCC
Confidence 9999888888999999999999999999988865 7899999999999999887632 211 2222344555566544
No 273
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.75 E-value=3.4e-18 Score=168.06 Aligned_cols=159 Identities=22% Similarity=0.317 Sum_probs=133.7
Q ss_pred CceeeEEcCCCCeEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccccccccchh
Q 036334 57 NWVGVECDANRSFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPAS 136 (654)
Q Consensus 57 ~w~gv~C~~~~~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 136 (654)
.|....|+. +.++.+++++. .+|.. + .++|++|+|++|.|++..|..|.++++|++|+|++|+|+...+..
T Consensus 13 ~~~~~~Cs~-----~~v~c~~~~l~-~ip~~-~--~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~ 83 (229)
T 3e6j_A 13 CPSQCSCSG-----TTVDCRSKRHA-SVPAG-I--PTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGV 83 (229)
T ss_dssp CCTTCEEET-----TEEECTTSCCS-SCCSC-C--CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTT
T ss_pred CCCCCEEeC-----CEeEccCCCcC-ccCCC-C--CCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhh
Confidence 355678874 34788888885 67753 3 389999999999999988999999999999999999999777777
Q ss_pred hccccccceeccccccccccCCCccccccccCccccccccccCCCCCC-CCCCCCeEEccCCcccccCcccccCCC---C
Q 036334 137 VTRMNRLTRLDLSSNNFSGKIPFDVNNLTHLTGLFLENNKFSGNLPSI-NPANLRDFNVSNNNLNGSIPATLSKFP---Q 212 (654)
Q Consensus 137 ~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~L~~L~l~~N~l~g~~p~~~~~~~---~ 212 (654)
|..+++|++|+|++|+|++..+..|..+++|+.|+|++|+|+..+... .+++|+.|+|++|+|++..+..|.+++ .
T Consensus 84 ~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 163 (229)
T 3e6j_A 84 FDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLTELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTH 163 (229)
T ss_dssp TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCSCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred cccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCcccccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCE
Confidence 899999999999999999777777899999999999999999665555 889999999999999966656666555 4
Q ss_pred ccccCCCCCCCC
Q 036334 213 SSFTGNLDLCGG 224 (654)
Q Consensus 213 l~~~~n~~~c~~ 224 (654)
+.+.+|+..|.+
T Consensus 164 L~l~~N~~~c~c 175 (229)
T 3e6j_A 164 AYLFGNPWDCEC 175 (229)
T ss_dssp EECTTSCBCTTB
T ss_pred EEeeCCCccCCc
Confidence 567789887754
No 274
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.74 E-value=2.7e-18 Score=174.63 Aligned_cols=144 Identities=22% Similarity=0.211 Sum_probs=97.2
Q ss_pred eEEEeecCCCCccccCCcccccCCCCccEEEeccCC-ccCcCCCCCCCccccccccccccccccccchhhccccccceec
Q 036334 69 FVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNR-LSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLD 147 (654)
Q Consensus 69 ~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 147 (654)
+++.|+|++|.+.+..+. .|.++++|++|+|++|. ++...|..|.++++|++|+|++|++++..|..+.++++|++|+
T Consensus 57 ~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 135 (285)
T 1ozn_A 57 NLTILWLHSNVLARIDAA-AFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLY 135 (285)
T ss_dssp TCCEEECCSSCCCEECTT-TTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCEEECCCCccceeCHh-hcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEE
Confidence 467777777777654333 57777777777777775 6655566677777777777777777766666677777777777
Q ss_pred cccccccccCCCccccccccCccccccccccCCCCCC--CCCCCCeEEccCCcccccCcccccCCCCc
Q 036334 148 LSSNNFSGKIPFDVNNLTHLTGLFLENNKFSGNLPSI--NPANLRDFNVSNNNLNGSIPATLSKFPQS 213 (654)
Q Consensus 148 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~g~~p~~~~~~~~l 213 (654)
|++|++++..+..+..+++|+.|+|++|+|++.++.. .+++|+.|+|++|++++..|..|.++++|
T Consensus 136 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 203 (285)
T 1ozn_A 136 LQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRL 203 (285)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTC
T ss_pred CCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccc
Confidence 7777777555555667777777777777777665542 56677777777777776666666555443
No 275
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.74 E-value=5.8e-18 Score=172.61 Aligned_cols=132 Identities=24% Similarity=0.283 Sum_probs=69.7
Q ss_pred cCCCCccEEEeccCCccCcCCCCCCCccccccccccccccccccchhhccccccceeccccccccccCCCccccccccCc
Q 036334 90 GKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLDLSSNNFSGKIPFDVNNLTHLTG 169 (654)
Q Consensus 90 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~ 169 (654)
+.+++|++|+|++|.|+ .+|..+.++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.
T Consensus 74 ~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 152 (290)
T 1p9a_G 74 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEK 152 (290)
T ss_dssp SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCE
T ss_pred CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCE
Confidence 34444555555555554 44445555555555555555555544455555555555555555555444444555555555
Q ss_pred cccccccccCCCCCC--CCCCCCeEEccCCcccccCcccccCCC---CccccCCCCCCC
Q 036334 170 LFLENNKFSGNLPSI--NPANLRDFNVSNNNLNGSIPATLSKFP---QSSFTGNLDLCG 223 (654)
Q Consensus 170 L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~g~~p~~~~~~~---~l~~~~n~~~c~ 223 (654)
|+|++|+|++.++.. .+++|+.|+|++|+|+ .+|..+..+. .+.+.+|++.|.
T Consensus 153 L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 153 LSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp EECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCS
T ss_pred EECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCc
Confidence 555555555444433 4555555555555555 4554443332 233445555554
No 276
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.73 E-value=2.6e-18 Score=180.45 Aligned_cols=165 Identities=24% Similarity=0.269 Sum_probs=136.9
Q ss_pred CccCCCCCCCceeeEEcCC-----------CCeEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCc
Q 036334 48 QWNASDSACNWVGVECDAN-----------RSFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNL 116 (654)
Q Consensus 48 ~W~~~~~~C~w~gv~C~~~-----------~~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l 116 (654)
.|.....+|.|.|+ |+-. ..+++.|+|++|++.+ ++++.|.++++|++|+|++|.+++..|..|.++
T Consensus 22 ~~~~~~~~C~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 99 (353)
T 2z80_A 22 SSNQASLSCDRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITY-ISNSDLQRCVNLQALVLTSNGINTIEEDSFSSL 99 (353)
T ss_dssp -----CCEECTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCE-ECTTTTTTCTTCCEEECTTSCCCEECTTTTTTC
T ss_pred CCCccCCCCCCCeE-eeCCCCCcccccccccccCcEEECCCCcCcc-cCHHHhccCCCCCEEECCCCccCccCHhhcCCC
Confidence 45556678999987 7522 2358999999999985 555579999999999999999998888899999
Q ss_pred cccccccccccccccccchhhccccccceeccccccccccCC-CccccccccCcccccccc-ccCCCCCC--CCCCCCeE
Q 036334 117 TLLRSLYLQSNQFSGVFPASVTRMNRLTRLDLSSNNFSGKIP-FDVNNLTHLTGLFLENNK-FSGNLPSI--NPANLRDF 192 (654)
Q Consensus 117 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~l~~N~-l~~~~~~~--~~~~L~~L 192 (654)
++|++|+|++|++++..+..|.++++|++|+|++|++++..+ ..+..+++|+.|++++|+ +.+..+.. .+++|+.|
T Consensus 100 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L 179 (353)
T 2z80_A 100 GSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEEL 179 (353)
T ss_dssp TTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEE
T ss_pred CCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEE
Confidence 999999999999997666669999999999999999994433 378999999999999994 66665544 78999999
Q ss_pred EccCCcccccCcccccCCCCcc
Q 036334 193 NVSNNNLNGSIPATLSKFPQSS 214 (654)
Q Consensus 193 ~l~~N~l~g~~p~~~~~~~~l~ 214 (654)
+|++|++++..|..+.++++|.
T Consensus 180 ~l~~n~l~~~~~~~l~~l~~L~ 201 (353)
T 2z80_A 180 EIDASDLQSYEPKSLKSIQNVS 201 (353)
T ss_dssp EEEETTCCEECTTTTTTCSEEE
T ss_pred ECCCCCcCccCHHHHhccccCC
Confidence 9999999988899888877654
No 277
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.73 E-value=4e-18 Score=175.19 Aligned_cols=131 Identities=23% Similarity=0.245 Sum_probs=62.6
Q ss_pred EEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCC-CCCCCccccccccccccccccccchhhccccccceecc
Q 036334 70 VYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIP-SDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLDL 148 (654)
Q Consensus 70 v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 148 (654)
++.|+|++|.+.. ++. .+..+++|++|+|++|.+++..+ ..|.++++|++|+|++|++++..|..+..+++|++|+|
T Consensus 80 L~~L~Ls~n~i~~-l~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 157 (306)
T 2z66_A 80 LKYLDLSFNGVIT-MSS-NFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKM 157 (306)
T ss_dssp CCEEECCSCSEEE-EEE-EEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEEC
T ss_pred cCEEECCCCcccc-Chh-hcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEEC
Confidence 5555555555542 332 24445555555555555543322 34444555555555555555444444444555555555
Q ss_pred ccccccc-cCCCccccccccCccccccccccCCCCCC--CCCCCCeEEccCCccccc
Q 036334 149 SSNNFSG-KIPFDVNNLTHLTGLFLENNKFSGNLPSI--NPANLRDFNVSNNNLNGS 202 (654)
Q Consensus 149 ~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~g~ 202 (654)
++|.+++ .+|..+..+++|+.|+|++|+|++..|.. .+++|+.|+|++|++++.
T Consensus 158 ~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 214 (306)
T 2z66_A 158 AGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSL 214 (306)
T ss_dssp TTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBC
T ss_pred CCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCcc
Confidence 5555443 34444444555555555555554443332 444455555555544433
No 278
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.73 E-value=3.6e-18 Score=177.37 Aligned_cols=148 Identities=24% Similarity=0.350 Sum_probs=127.9
Q ss_pred CeEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCC---------ccccccccccccccccccchhhc
Q 036334 68 SFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSN---------LTLLRSLYLQSNQFSGVFPASVT 138 (654)
Q Consensus 68 ~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~---------l~~L~~L~Ls~N~l~~~~p~~~~ 138 (654)
.+++.|+|++|.+. .+|. .++++++|++|+|++|++.+.+|..+.. +++|++|+|++|+++ .+|..+.
T Consensus 127 ~~L~~L~Ls~n~l~-~lp~-~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~ 203 (328)
T 4fcg_A 127 AGLETLTLARNPLR-ALPA-SIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIA 203 (328)
T ss_dssp TTCSEEEEESCCCC-CCCG-GGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGG
T ss_pred CCCCEEECCCCccc-cCcH-HHhcCcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhc
Confidence 35889999999998 7776 5999999999999999998899988765 999999999999999 8888999
Q ss_pred cccccceeccccccccccCCCccccccccCccccccccccCCCCCC--CCCCCCeEEccCCcccccCcccccCCCCcc--
Q 036334 139 RMNRLTRLDLSSNNFSGKIPFDVNNLTHLTGLFLENNKFSGNLPSI--NPANLRDFNVSNNNLNGSIPATLSKFPQSS-- 214 (654)
Q Consensus 139 ~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~g~~p~~~~~~~~l~-- 214 (654)
++++|++|+|++|+++ .+|..+..+++|+.|+|++|++.+.+|.. .+++|+.|+|++|++.+.+|..+.++++|.
T Consensus 204 ~l~~L~~L~L~~N~l~-~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L 282 (328)
T 4fcg_A 204 NLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKL 282 (328)
T ss_dssp GCTTCCEEEEESSCCC-CCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEE
T ss_pred CCCCCCEEEccCCCCC-cCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEE
Confidence 9999999999999999 46668999999999999999999888875 788999999999999999998887776654
Q ss_pred -ccCCC
Q 036334 215 -FTGNL 219 (654)
Q Consensus 215 -~~~n~ 219 (654)
+.+|.
T Consensus 283 ~L~~n~ 288 (328)
T 4fcg_A 283 DLRGCV 288 (328)
T ss_dssp ECTTCT
T ss_pred eCCCCC
Confidence 44544
No 279
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.73 E-value=6.9e-18 Score=161.03 Aligned_cols=171 Identities=22% Similarity=0.286 Sum_probs=136.7
Q ss_pred CCCCCceeeEEcCCC---------CeEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCcccccccc
Q 036334 53 DSACNWVGVECDANR---------SFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLY 123 (654)
Q Consensus 53 ~~~C~w~gv~C~~~~---------~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 123 (654)
...|.|..+.|+.+. ..++.|+|++|.+.+..+...|+.+++|++|+|++|.|++..|..|.++++|++|+
T Consensus 5 ~C~C~~~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 84 (192)
T 1w8a_A 5 MCHCEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQ 84 (192)
T ss_dssp TSEEETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEE
T ss_pred CCEECCCEEEcCCCCcCcCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEE
Confidence 344889999997541 25889999999998665544589999999999999999999899999999999999
Q ss_pred ccccccccccchhhccccccceeccccccccccCCCccccccccCccccccccccCCCCCCC-CCCCCeEEccCCccccc
Q 036334 124 LQSNQFSGVFPASVTRMNRLTRLDLSSNNFSGKIPFDVNNLTHLTGLFLENNKFSGNLPSIN-PANLRDFNVSNNNLNGS 202 (654)
Q Consensus 124 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~-~~~L~~L~l~~N~l~g~ 202 (654)
|++|+|++..|..|.++++|++|+|++|+|++.+|..+..+++|+.|+|++|.+++..+... ...++...+..+.....
T Consensus 85 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~ 164 (192)
T 1w8a_A 85 LGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCG 164 (192)
T ss_dssp CCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBC
T ss_pred CCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCC
Confidence 99999999999889999999999999999999999999999999999999999997665321 11122334455556666
Q ss_pred CcccccCCCCccccCCCCCCC
Q 036334 203 IPATLSKFPQSSFTGNLDLCG 223 (654)
Q Consensus 203 ~p~~~~~~~~l~~~~n~~~c~ 223 (654)
.|..+....-..+..+...|.
T Consensus 165 ~P~~l~~~~l~~l~~~~~~C~ 185 (192)
T 1w8a_A 165 APSKVRDVQIKDLPHSEFKCS 185 (192)
T ss_dssp SSTTTTTSBGGGSCTTTCCCC
T ss_pred CChHHcCCChhhCcHhhcCcC
Confidence 677776665555555555554
No 280
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.72 E-value=3.5e-18 Score=190.42 Aligned_cols=158 Identities=22% Similarity=0.260 Sum_probs=138.5
Q ss_pred CCCceeeEEcCC-----------CCeEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCcccccccc
Q 036334 55 ACNWVGVECDAN-----------RSFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLY 123 (654)
Q Consensus 55 ~C~w~gv~C~~~-----------~~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 123 (654)
.|.|.|+ |+.. ..+++.|+|++|.+.+..+. .|.++++|++|+|++|.+++..|..|.++++|++|+
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 80 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHG-DLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLD 80 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSS-TTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccChh-hhhcCCcccEEECCCCCcCccChhhccccccCCEEE
Confidence 5999998 8642 13589999999999865554 699999999999999999988889999999999999
Q ss_pred ccccccccccchhhccccccceeccccccccc-cCCCccccccccCccccccccccCCCC-C-C-CCCCCCeEEccCCcc
Q 036334 124 LQSNQFSGVFPASVTRMNRLTRLDLSSNNFSG-KIPFDVNNLTHLTGLFLENNKFSGNLP-S-I-NPANLRDFNVSNNNL 199 (654)
Q Consensus 124 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~~-~-~-~~~~L~~L~l~~N~l 199 (654)
|++|++++..|..|+++++|++|+|++|.+++ .+|..+.++++|++|++++|++.+.++ . + .+++|++|+|++|.+
T Consensus 81 Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l 160 (549)
T 2z81_A 81 LSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSL 160 (549)
T ss_dssp CTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTC
T ss_pred CCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcc
Confidence 99999999888889999999999999999996 467789999999999999999655554 3 3 889999999999999
Q ss_pred cccCcccccCCCCcc
Q 036334 200 NGSIPATLSKFPQSS 214 (654)
Q Consensus 200 ~g~~p~~~~~~~~l~ 214 (654)
++.+|..+.+++++.
T Consensus 161 ~~~~~~~l~~l~~L~ 175 (549)
T 2z81_A 161 RNYQSQSLKSIRDIH 175 (549)
T ss_dssp CEECTTTTTTCSEEE
T ss_pred cccChhhhhccccCc
Confidence 999999888776543
No 281
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.71 E-value=2e-17 Score=164.92 Aligned_cols=134 Identities=24% Similarity=0.284 Sum_probs=122.6
Q ss_pred CeEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccccccccchhhccccccceec
Q 036334 68 SFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLD 147 (654)
Q Consensus 68 ~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 147 (654)
.+++.|+|++|.+.+.. +..|..+++|++|+|++|.|++..+..|.++++|++|+|++|+|++..+..|..+++|+.|+
T Consensus 59 ~~L~~L~L~~n~l~~~~-~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 137 (251)
T 3m19_A 59 TKLTWLNLDYNQLQTLS-AGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELR 137 (251)
T ss_dssp TTCCEEECTTSCCCCCC-TTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred ccCCEEECCCCcCCccC-HhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEE
Confidence 45999999999998744 45799999999999999999988888899999999999999999988777889999999999
Q ss_pred cccccccccCCCccccccccCccccccccccCCCCCC--CCCCCCeEEccCCccccc
Q 036334 148 LSSNNFSGKIPFDVNNLTHLTGLFLENNKFSGNLPSI--NPANLRDFNVSNNNLNGS 202 (654)
Q Consensus 148 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~g~ 202 (654)
|++|+|++..+..|..+++|+.|+|++|+|++.++.. .+++|+.|+|++|++++.
T Consensus 138 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 138 LNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 9999999777778999999999999999999888754 789999999999999876
No 282
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.71 E-value=5.5e-18 Score=191.91 Aligned_cols=145 Identities=20% Similarity=0.247 Sum_probs=130.0
Q ss_pred CeEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccccccccchhhccccccceec
Q 036334 68 SFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLD 147 (654)
Q Consensus 68 ~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 147 (654)
..++.|||++|.|++ +++..|.++++|++|||++|+|++..|..|.+|++|++|+|++|+|++..+..|.++++|++|+
T Consensus 52 ~~~~~LdLs~N~i~~-l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~ 130 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRH-LGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 130 (635)
T ss_dssp TTCCEEECTTSCCCE-ECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEE
T ss_pred cCCCEEEeeCCCCCC-CCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEE
Confidence 358999999999984 6666899999999999999999988788899999999999999999988888999999999999
Q ss_pred cccccccccCCCccccccccCccccccccccCC-CCCC--CCCCCCeEEccCCcccccCcccccCCCCc
Q 036334 148 LSSNNFSGKIPFDVNNLTHLTGLFLENNKFSGN-LPSI--NPANLRDFNVSNNNLNGSIPATLSKFPQS 213 (654)
Q Consensus 148 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~-~~~~--~~~~L~~L~l~~N~l~g~~p~~~~~~~~l 213 (654)
|++|+|++..+..|+++++|++|+|++|+|++. +|.. .+++|++|+|++|+|++..|..|..+.++
T Consensus 131 Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l 199 (635)
T 4g8a_A 131 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 199 (635)
T ss_dssp CTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTC
T ss_pred CCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhh
Confidence 999999987777899999999999999999864 4444 78999999999999998888887766544
No 283
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.71 E-value=4.3e-18 Score=174.99 Aligned_cols=160 Identities=21% Similarity=0.258 Sum_probs=127.6
Q ss_pred CCCCCceeeEEcCCC---------CeEEEeecCCCCccccCCcccccCCCCccEEEeccCCccC--cCCCCCCCcccccc
Q 036334 53 DSACNWVGVECDANR---------SFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSG--EIPSDFSNLTLLRS 121 (654)
Q Consensus 53 ~~~C~w~gv~C~~~~---------~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~ 121 (654)
...|.|.+|.|++.. .+++.|+|++|++. .+++..|.++++|++|+|++|.++. ..|..+..+++|++
T Consensus 4 ~C~C~~~~l~c~~~~l~~ip~~~~~~l~~L~L~~n~l~-~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~ 82 (306)
T 2z66_A 4 RCSCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKY 82 (306)
T ss_dssp TCEEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCE
T ss_pred CCeeCCCEEEcCCCCcccCCCCCCCCCCEEECCCCccC-ccCHhHhhccccCCEEECCCCccCcccCcccccccccccCE
Confidence 345899999997532 35899999999997 6777778999999999999999983 33566777888999
Q ss_pred ccccccccccccchhhccccccceeccccccccccCC-CccccccccCccccccccccCCCCCC--CCCCCCeEEccCCc
Q 036334 122 LYLQSNQFSGVFPASVTRMNRLTRLDLSSNNFSGKIP-FDVNNLTHLTGLFLENNKFSGNLPSI--NPANLRDFNVSNNN 198 (654)
Q Consensus 122 L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~ 198 (654)
|+|++|+++ .+|..+..+++|++|+|++|++++..+ ..+..+++|++|++++|++.+..+.. .+++|+.|+|++|.
T Consensus 83 L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 161 (306)
T 2z66_A 83 LDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNS 161 (306)
T ss_dssp EECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCE
T ss_pred EECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCc
Confidence 999999888 567778888888888888888886554 56788888888888888888777664 67888888888888
Q ss_pred ccc-cCcccccCCCCcc
Q 036334 199 LNG-SIPATLSKFPQSS 214 (654)
Q Consensus 199 l~g-~~p~~~~~~~~l~ 214 (654)
+++ .+|..+..+++|.
T Consensus 162 l~~~~~~~~~~~l~~L~ 178 (306)
T 2z66_A 162 FQENFLPDIFTELRNLT 178 (306)
T ss_dssp EGGGEECSCCTTCTTCC
T ss_pred cccccchhHHhhCcCCC
Confidence 876 5677776665543
No 284
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.71 E-value=6.5e-17 Score=156.30 Aligned_cols=156 Identities=22% Similarity=0.303 Sum_probs=130.0
Q ss_pred eeEEcCCCCeEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccccccccchhhcc
Q 036334 60 GVECDANRSFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTR 139 (654)
Q Consensus 60 gv~C~~~~~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 139 (654)
++.|.. +.++.+++++. .+|. ...++|++|+|++|.+++..+..|.++++|++|+|++|++++..+..|..
T Consensus 4 ~C~C~~-----~~v~c~~~~l~-~~p~---~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 74 (208)
T 2o6s_A 4 RCSCSG-----TTVECYSQGRT-SVPT---GIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNK 74 (208)
T ss_dssp TCEEET-----TEEECCSSCCS-SCCS---CCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTT
T ss_pred CCEECC-----CEEEecCCCcc-CCCC---CCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCC
Confidence 577854 35778888886 4554 23568999999999999777777999999999999999999777777899
Q ss_pred ccccceeccccccccccCCCccccccccCccccccccccCCCCCC--CCCCCCeEEccCCcccccCcccccCCC---Ccc
Q 036334 140 MNRLTRLDLSSNNFSGKIPFDVNNLTHLTGLFLENNKFSGNLPSI--NPANLRDFNVSNNNLNGSIPATLSKFP---QSS 214 (654)
Q Consensus 140 l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~g~~p~~~~~~~---~l~ 214 (654)
+++|++|+|++|+|++..+..+..+++|+.|+|++|+|++.++.. .+++|+.|+|++|++++..+..+.+++ .+.
T Consensus 75 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 154 (208)
T 2o6s_A 75 LTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIW 154 (208)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEE
T ss_pred CCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEE
Confidence 999999999999999777777899999999999999999888864 789999999999999966665566554 456
Q ss_pred ccCCCCCCCC
Q 036334 215 FTGNLDLCGG 224 (654)
Q Consensus 215 ~~~n~~~c~~ 224 (654)
+.+|+..|.+
T Consensus 155 l~~N~~~~~~ 164 (208)
T 2o6s_A 155 LHDNPWDCTC 164 (208)
T ss_dssp CCSCCBCCCT
T ss_pred ecCCCeecCC
Confidence 7788777654
No 285
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.71 E-value=9.8e-18 Score=182.23 Aligned_cols=157 Identities=22% Similarity=0.294 Sum_probs=137.0
Q ss_pred CCCCcee--eEEcCCC--------CeEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcC-CCCCCCccccccc
Q 036334 54 SACNWVG--VECDANR--------SFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEI-PSDFSNLTLLRSL 122 (654)
Q Consensus 54 ~~C~w~g--v~C~~~~--------~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L 122 (654)
..|.|.+ |.|+... .+++.|+|++|.+.+..+. .|.++++|++|+|++|.+.+.+ +..|.++++|++|
T Consensus 6 ~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~-~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L 84 (455)
T 3v47_A 6 SECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNET-SFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIIL 84 (455)
T ss_dssp -CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTT-TTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEE
T ss_pred ceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChh-HhccCccccEEECcCCcccceECcccccccccCCEE
Confidence 3566666 8887543 4689999999999875554 6999999999999999998666 5679999999999
Q ss_pred cccccccccccchhhccccccceeccccccccccCCCc--cccccccCccccccccccCCCCC--C-CCCCCCeEEccCC
Q 036334 123 YLQSNQFSGVFPASVTRMNRLTRLDLSSNNFSGKIPFD--VNNLTHLTGLFLENNKFSGNLPS--I-NPANLRDFNVSNN 197 (654)
Q Consensus 123 ~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~l~~L~~L~l~~N~l~~~~~~--~-~~~~L~~L~l~~N 197 (654)
+|++|++++..|..|.++++|++|+|++|++++.+|.. +..+++|++|+|++|+|++..|. . .+++|+.|+|++|
T Consensus 85 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n 164 (455)
T 3v47_A 85 KLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFN 164 (455)
T ss_dssp ECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTC
T ss_pred eCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCC
Confidence 99999999999999999999999999999999866544 89999999999999999998775 3 8899999999999
Q ss_pred cccccCcccccCCC
Q 036334 198 NLNGSIPATLSKFP 211 (654)
Q Consensus 198 ~l~g~~p~~~~~~~ 211 (654)
++++..|..+.++.
T Consensus 165 ~l~~~~~~~l~~l~ 178 (455)
T 3v47_A 165 KVKSICEEDLLNFQ 178 (455)
T ss_dssp CBSCCCTTTSGGGT
T ss_pred cccccChhhhhccc
Confidence 99999998887764
No 286
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.71 E-value=2.4e-17 Score=166.41 Aligned_cols=138 Identities=26% Similarity=0.300 Sum_probs=125.1
Q ss_pred CCCeEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccccccccchhhccccccce
Q 036334 66 NRSFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTR 145 (654)
Q Consensus 66 ~~~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 145 (654)
.-.+++.|+|++|.+.+ +++..|.++++|++|+|++|.+++..+..|.++++|++|+|++|++++..+..+..+++|+.
T Consensus 83 ~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 161 (272)
T 3rfs_A 83 ELTNLTYLILTGNQLQS-LPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTE 161 (272)
T ss_dssp TCTTCCEEECTTSCCCC-CCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred CCCCCCEEECCCCccCc-cChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCE
Confidence 33569999999999985 45556899999999999999999888878999999999999999999888888999999999
Q ss_pred eccccccccccCCCccccccccCccccccccccCCCCCC--CCCCCCeEEccCCcccccCc
Q 036334 146 LDLSSNNFSGKIPFDVNNLTHLTGLFLENNKFSGNLPSI--NPANLRDFNVSNNNLNGSIP 204 (654)
Q Consensus 146 L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~g~~p 204 (654)
|+|++|+|++..+..+..+++|+.|+|++|+|++.++.. .+++|+.|+|++|++.+..|
T Consensus 162 L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 222 (272)
T 3rfs_A 162 LDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 222 (272)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred EECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCc
Confidence 999999999888878899999999999999999988864 78999999999999987766
No 287
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.71 E-value=2.7e-17 Score=167.20 Aligned_cols=150 Identities=22% Similarity=0.270 Sum_probs=131.0
Q ss_pred CeEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccc-cccccchhhcccccccee
Q 036334 68 SFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQ-FSGVFPASVTRMNRLTRL 146 (654)
Q Consensus 68 ~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L 146 (654)
..++.|+|++|.+.+ ++++.|.++++|++|+|++|.+++..|..|.++++|++|+|++|+ ++...|..|..+++|++|
T Consensus 32 ~~l~~L~l~~n~i~~-~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L 110 (285)
T 1ozn_A 32 AASQRIFLHGNRISH-VPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (285)
T ss_dssp TTCSEEECTTSCCCE-ECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CCceEEEeeCCcCCc-cCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEE
Confidence 358899999999986 555579999999999999999998889999999999999999997 887778999999999999
Q ss_pred ccccccccccCCCccccccccCccccccccccCCCCCC--CCCCCCeEEccCCcccccCcccccCCCCc---cccCC
Q 036334 147 DLSSNNFSGKIPFDVNNLTHLTGLFLENNKFSGNLPSI--NPANLRDFNVSNNNLNGSIPATLSKFPQS---SFTGN 218 (654)
Q Consensus 147 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~g~~p~~~~~~~~l---~~~~n 218 (654)
+|++|++++..|..+.++++|++|++++|+|++..+.. .+++|+.|+|++|++++..+..|.++++| .+.+|
T Consensus 111 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 187 (285)
T 1ozn_A 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQN 187 (285)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred ECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCC
Confidence 99999999888889999999999999999999888764 78999999999999996665667766654 44454
No 288
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.70 E-value=4.5e-17 Score=164.21 Aligned_cols=161 Identities=24% Similarity=0.328 Sum_probs=131.5
Q ss_pred CCCCCceeeEEcCCCCeEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccccccc
Q 036334 53 DSACNWVGVECDANRSFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGV 132 (654)
Q Consensus 53 ~~~C~w~gv~C~~~~~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 132 (654)
.++|.|.|+.|.-. ..++.++++++++. .+|.. +. ++|++|+|++|.|++..+..|.++++|++|+|++|+++..
T Consensus 2 ~~~C~~~~~~C~c~-~~~~~l~~~~~~l~-~ip~~-~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i 76 (270)
T 2o6q_A 2 EALCKKDGGVCSCN-NNKNSVDCSSKKLT-AIPSN-IP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTL 76 (270)
T ss_dssp CCCBGGGTCSBEEE-TTTTEEECTTSCCS-SCCSC-CC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCC
T ss_pred CccCCCCCCCCEeC-CCCCEEEccCCCCC-ccCCC-CC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCee
Confidence 47899998877532 13568999999997 46653 33 6899999999999977777899999999999999999976
Q ss_pred cchhhccccccceeccccccccccCCCccccccccCccccccccccCCCCCC--CCCCCCeEEccCCcccccCcccccCC
Q 036334 133 FPASVTRMNRLTRLDLSSNNFSGKIPFDVNNLTHLTGLFLENNKFSGNLPSI--NPANLRDFNVSNNNLNGSIPATLSKF 210 (654)
Q Consensus 133 ~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~g~~p~~~~~~ 210 (654)
.+..|.++++|++|+|++|+|++..+..+..+++|+.|+|++|+|++..+.. .+++|++|+|++|.|++..+..|.++
T Consensus 77 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 156 (270)
T 2o6q_A 77 PAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKL 156 (270)
T ss_dssp CTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred ChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCC
Confidence 6667788999999999999999777777899999999999999999888764 78999999999999996555556665
Q ss_pred CCc---cccCC
Q 036334 211 PQS---SFTGN 218 (654)
Q Consensus 211 ~~l---~~~~n 218 (654)
++| .+.+|
T Consensus 157 ~~L~~L~L~~n 167 (270)
T 2o6q_A 157 TSLKELRLYNN 167 (270)
T ss_dssp TTCCEEECCSS
T ss_pred cccceeEecCC
Confidence 554 44454
No 289
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.70 E-value=2.7e-17 Score=154.67 Aligned_cols=134 Identities=26% Similarity=0.359 Sum_probs=114.0
Q ss_pred CCCceeeEEcCCCCeEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccccccccc
Q 036334 55 ACNWVGVECDANRSFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFP 134 (654)
Q Consensus 55 ~C~w~gv~C~~~~~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 134 (654)
.|+|.++.|+.+ ++. .+|.. ..++|++|+|++|.+++..+..|.++++|++|+|++|+|++..+
T Consensus 6 ~C~~~~l~~~~~------------~l~-~~p~~---~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 69 (177)
T 2o6r_A 6 SCSGTEIRCNSK------------GLT-SVPTG---IPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPD 69 (177)
T ss_dssp EEETTEEECCSS------------CCS-SCCTT---CCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCT
T ss_pred EeCCCEEEecCC------------CCc-cCCCC---CCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeCh
Confidence 466777777543 333 34432 23689999999999997777788999999999999999998777
Q ss_pred hhhccccccceeccccccccccCCCccccccccCccccccccccCCCCCC--CCCCCCeEEccCCcccccCc
Q 036334 135 ASVTRMNRLTRLDLSSNNFSGKIPFDVNNLTHLTGLFLENNKFSGNLPSI--NPANLRDFNVSNNNLNGSIP 204 (654)
Q Consensus 135 ~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~g~~p 204 (654)
..|..+++|++|+|++|+|++..+..+..+++|+.|+|++|+|++.++.. .+++|+.|+|++|++++..|
T Consensus 70 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 70 GVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred hHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 78899999999999999999877777899999999999999999887764 68999999999999998776
No 290
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.70 E-value=1.4e-17 Score=187.41 Aligned_cols=173 Identities=17% Similarity=0.167 Sum_probs=142.7
Q ss_pred CCCCccCCCCCCC----ceeeEEcCC----------------CCeEEEeecCCCCccccCCcccccCCCCccEEEeccCC
Q 036334 45 NRVQWNASDSACN----WVGVECDAN----------------RSFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNR 104 (654)
Q Consensus 45 ~~~~W~~~~~~C~----w~gv~C~~~----------------~~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~ 104 (654)
...+|.++.+||. |.++.|+.. -..+..|++++|.+. .+|+..|.++++|++|+|++|.
T Consensus 8 ~l~~~~~~~~C~~~~~~~~c~~~~~~i~~~~~~~~~~~~~l~l~~l~~l~l~~~~l~-~lp~~~~~~l~~L~~L~L~~n~ 86 (597)
T 3oja_B 8 NVKPRQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQ 86 (597)
T ss_dssp ---CCCSEECCCCC--CCSEEECSCEECSSCCCCEESCSSGGGCCCSEEEESSCEES-EECTHHHHHCCCCSEEECTTSC
T ss_pred cccCCCCCCcCcccCcCceeEecCceecccccccccCcccccCCCceEEEeeCCCCC-CcCHHHHccCCCCcEEECCCCC
Confidence 3467887777774 766655410 023567888888775 5777778999999999999999
Q ss_pred ccCcCCCCCCCccccccccccccccccccchhhccccccceeccccccccccCCCccccccccCccccccccccCCCCCC
Q 036334 105 LSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLDLSSNNFSGKIPFDVNNLTHLTGLFLENNKFSGNLPSI 184 (654)
Q Consensus 105 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~ 184 (654)
|++..|..|+++++|++|+|++|.+++..|..|+++++|++|+|++|.|++..+..|.++++|++|+|++|.|++.+|..
T Consensus 87 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 166 (597)
T 3oja_B 87 IEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDT 166 (597)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTT
T ss_pred CCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhh
Confidence 99888889999999999999999999998989999999999999999999666666799999999999999999988864
Q ss_pred --CCCCCCeEEccCCcccccCcccccCCCCccccCC
Q 036334 185 --NPANLRDFNVSNNNLNGSIPATLSKFPQSSFTGN 218 (654)
Q Consensus 185 --~~~~L~~L~l~~N~l~g~~p~~~~~~~~l~~~~n 218 (654)
.+++|+.|+|++|.|++.-+..+.++..+.+.+|
T Consensus 167 ~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n 202 (597)
T 3oja_B 167 FQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYN 202 (597)
T ss_dssp TTTCTTCCEEECTTSCCSBCCGGGCTTCSEEECCSS
T ss_pred hhcCCcCcEEECcCCCCCCcChhhhhhhhhhhcccC
Confidence 8899999999999999765566677766666655
No 291
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.70 E-value=4.6e-18 Score=194.89 Aligned_cols=180 Identities=19% Similarity=0.243 Sum_probs=120.3
Q ss_pred CChhHHHHHHHHHhhCCC---CCCCCccC-CCCCCCceeeEEcCCCCeEEEeecCCCC------------------ccc-
Q 036334 26 EPTQDKQALLAFLSRTPH---KNRVQWNA-SDSACNWVGVECDANRSFVYSLRLPGVG------------------LVG- 82 (654)
Q Consensus 26 ~~~~~~~al~~~~~~~~~---~~~~~W~~-~~~~C~w~gv~C~~~~~~v~~L~l~~~~------------------l~~- 82 (654)
....++++|+++...... .....|.. ++..+.|.++.++... ++.|+|.+|+ +.+
T Consensus 129 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~--~~~l~L~~n~~~~~~~~~l~~l~Ls~~~i~~~ 206 (727)
T 4b8c_D 129 LVDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVSTPL--TPKIELFANGKDEANQALLQHKKLSQYSIDED 206 (727)
T ss_dssp ---CCCHHHHHHHHHHHHHHTTC---------------------------------------------------------
T ss_pred ccccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecCCc--cceEEeeCCCCCcchhhHhhcCccCcccccCc
Confidence 346688999999765432 22245743 4456789998887643 5555554433 322
Q ss_pred -------cCCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccccccccchhhccccccceeccccccccc
Q 036334 83 -------PIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLDLSSNNFSG 155 (654)
Q Consensus 83 -------~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 155 (654)
.++++.+..+++|+.|+|++|.|. .+|..+.++++|++|+|++|+|+ .+|..|++|++|++|+|++|+|+
T Consensus 207 ~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~- 283 (727)
T 4b8c_D 207 DDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT- 283 (727)
T ss_dssp ---------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-
T ss_pred cccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-
Confidence 134556889999999999999999 78888889999999999999999 89999999999999999999999
Q ss_pred cCCCccccccccCccccccccccCCCCCC-CCCCCCeEEccCCcccccCcccccCC
Q 036334 156 KIPFDVNNLTHLTGLFLENNKFSGNLPSI-NPANLRDFNVSNNNLNGSIPATLSKF 210 (654)
Q Consensus 156 ~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~L~~L~l~~N~l~g~~p~~~~~~ 210 (654)
.+|..|++|++|++|+|++|.|+..+..+ .+++|+.|+|++|+|+|.+|..+..+
T Consensus 284 ~lp~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~ 339 (727)
T 4b8c_D 284 SLPAELGSCFQLKYFYFFDNMVTTLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEK 339 (727)
T ss_dssp SCCSSGGGGTTCSEEECCSSCCCCCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHH
T ss_pred ccChhhcCCCCCCEEECCCCCCCccChhhhcCCCccEEeCCCCccCCCChHHHhhc
Confidence 88999999999999999999998665555 88999999999999999999887654
No 292
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.70 E-value=1.7e-17 Score=194.30 Aligned_cols=138 Identities=26% Similarity=0.291 Sum_probs=124.4
Q ss_pred ccCCCCccEEEeccCCccCcCCC-CCCCccccccccccccccc-----cccchhhccccccceeccccccccccCCCccc
Q 036334 89 LGKLSQLRVLSLRSNRLSGEIPS-DFSNLTLLRSLYLQSNQFS-----GVFPASVTRMNRLTRLDLSSNNFSGKIPFDVN 162 (654)
Q Consensus 89 l~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~-----~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~ 162 (654)
+.++++|++|+|++|.+++..+. .+..+++|+.|+|++|.++ +..+..|.++++|+.|+|++|+|++..|..|.
T Consensus 422 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 501 (844)
T 3j0a_A 422 LLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFS 501 (844)
T ss_dssp HTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSS
T ss_pred hhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHcc
Confidence 45889999999999999966554 4667899999999999998 45567789999999999999999999999999
Q ss_pred cccccCccccccccccCCCCCCCCCCCCeEEccCCcccccCcccccCCCCccccCCCCCCCCCC
Q 036334 163 NLTHLTGLFLENNKFSGNLPSINPANLRDFNVSNNNLNGSIPATLSKFPQSSFTGNLDLCGGPL 226 (654)
Q Consensus 163 ~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~~~~l~~~~n~~~c~~~~ 226 (654)
.+++|+.|+|++|+|++.++....++|+.|+|++|+|++..|..|.++..+.+.||+..|+|+.
T Consensus 502 ~l~~L~~L~Ls~N~l~~l~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~L~~l~l~~Np~~C~c~~ 565 (844)
T 3j0a_A 502 HLTALRGLSLNSNRLTVLSHNDLPANLEILDISRNQLLAPNPDVFVSLSVLDITHNKFICECEL 565 (844)
T ss_dssp SCCSCSEEEEESCCCSSCCCCCCCSCCCEEEEEEECCCCCCSCCCSSCCEEEEEEECCCCSSSC
T ss_pred chhhhheeECCCCCCCccChhhhhccccEEECCCCcCCCCChhHhCCcCEEEecCCCccccccc
Confidence 9999999999999999988877668999999999999999999999999999999999998764
No 293
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.70 E-value=1.7e-17 Score=187.30 Aligned_cols=157 Identities=20% Similarity=0.133 Sum_probs=107.3
Q ss_pred eEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCcccccccccccccccc-ccchhhccccccceec
Q 036334 69 FVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSG-VFPASVTRMNRLTRLD 147 (654)
Q Consensus 69 ~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~ 147 (654)
.++.|+|++|.+.+..+...+.++++|++|+|++|.+++..|..|.++++|++|+|++|++++ .+|..+..+++|+.|+
T Consensus 400 ~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ 479 (606)
T 3vq2_A 400 ELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLD 479 (606)
T ss_dssp TCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEE
T ss_pred CCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEE
Confidence 355666666666655553456677777777777777776667777777777777777777776 3666777777777777
Q ss_pred cccccccccCCCccccccccCccccccccccCCCCCC--CCCCCCeEEccCCcccccCcccccCC----CCccccCCCCC
Q 036334 148 LSSNNFSGKIPFDVNNLTHLTGLFLENNKFSGNLPSI--NPANLRDFNVSNNNLNGSIPATLSKF----PQSSFTGNLDL 221 (654)
Q Consensus 148 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~g~~p~~~~~~----~~l~~~~n~~~ 221 (654)
|++|++++..|..+..+++|+.|+|++|++++.+|.. .+++|+.|+|++|+|+ .+|..+..+ ..+.+.+|+..
T Consensus 480 Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~ 558 (606)
T 3vq2_A 480 LSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVA 558 (606)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCC
T ss_pred CCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcc
Confidence 7777777766777777777777777777777765543 6677777777777777 666655543 34556677777
Q ss_pred CCCCC
Q 036334 222 CGGPL 226 (654)
Q Consensus 222 c~~~~ 226 (654)
|+++.
T Consensus 559 c~c~~ 563 (606)
T 3vq2_A 559 CICEH 563 (606)
T ss_dssp CSSTT
T ss_pred cCCcc
Confidence 76553
No 294
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.69 E-value=3.3e-17 Score=165.77 Aligned_cols=155 Identities=21% Similarity=0.274 Sum_probs=81.5
Q ss_pred EEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccccccccchhhccccccceeccc
Q 036334 70 VYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLDLS 149 (654)
Q Consensus 70 v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 149 (654)
++.|+|++|.+.+ +++..|.++++|++|+|++|.+++..+..|.++++|++|+|++|++++..+..+..+++|++|+|+
T Consensus 54 L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 132 (276)
T 2z62_A 54 LQVLDLSRCEIQT-IEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVA 132 (276)
T ss_dssp CSEEECTTCCCCE-ECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECC
T ss_pred CcEEECCCCcCCc-cCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECc
Confidence 5555555555543 222245555555555555555554444455555555555555555554444445555555555555
Q ss_pred ccccccc-CCCccccccccCccccccccc----------------------------cCCCCCC-CCCCCCeEEccCCcc
Q 036334 150 SNNFSGK-IPFDVNNLTHLTGLFLENNKF----------------------------SGNLPSI-NPANLRDFNVSNNNL 199 (654)
Q Consensus 150 ~N~l~~~-~p~~~~~l~~L~~L~l~~N~l----------------------------~~~~~~~-~~~~L~~L~l~~N~l 199 (654)
+|++++. +|..+..+++|+.|+|++|+| ++..+.. ...+|+.|+|++|+|
T Consensus 133 ~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~~~L~~L~L~~n~l 212 (276)
T 2z62_A 133 HNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELALDTNQL 212 (276)
T ss_dssp SSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCSCCEEEEECCSSCC
T ss_pred CCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccCCCcccEEECCCCce
Confidence 5555432 344455555555555555554 4443333 334677777777777
Q ss_pred cccCcccccCCC---CccccCCCCCCCCC
Q 036334 200 NGSIPATLSKFP---QSSFTGNLDLCGGP 225 (654)
Q Consensus 200 ~g~~p~~~~~~~---~l~~~~n~~~c~~~ 225 (654)
++..+..|.+++ .+.+.+|+..|.++
T Consensus 213 ~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 213 KSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp SCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred eecCHhHhcccccccEEEccCCcccccCC
Confidence 754444444443 45566777776543
No 295
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.69 E-value=4.1e-17 Score=177.32 Aligned_cols=156 Identities=19% Similarity=0.197 Sum_probs=119.8
Q ss_pred ceeeEEcCCC---------CeEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccc
Q 036334 58 WVGVECDANR---------SFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQ 128 (654)
Q Consensus 58 w~gv~C~~~~---------~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 128 (654)
|..|.|.+.. .+++.|+|++|++.+..+ +.|.++++|++|+|++|.|++..|..|.++++|++|+|++|+
T Consensus 56 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~ 134 (452)
T 3zyi_A 56 FSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQA-DTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNW 134 (452)
T ss_dssp SCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECT-TTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CcEEEECCCCcCccCCCCCCCccEEECcCCcCceECH-HHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCc
Confidence 5678886432 358899999999987554 479999999999999999998888899999999999999999
Q ss_pred cccccchhhccccccceeccccccccccCCCc-------------------------cccccccCccccccccccCCCCC
Q 036334 129 FSGVFPASVTRMNRLTRLDLSSNNFSGKIPFD-------------------------VNNLTHLTGLFLENNKFSGNLPS 183 (654)
Q Consensus 129 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-------------------------~~~l~~L~~L~l~~N~l~~~~~~ 183 (654)
|++..+..|..+++|++|+|++|+|++..+.. |.++++|+.|+|++|+|++.+..
T Consensus 135 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~ 214 (452)
T 3zyi_A 135 LTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMPNL 214 (452)
T ss_dssp CSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSCCCC
T ss_pred CCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccccccc
Confidence 99777777999999999999999988554434 44555566666666666654322
Q ss_pred CCCCCCCeEEccCCcccccCcccccCCCCcc
Q 036334 184 INPANLRDFNVSNNNLNGSIPATLSKFPQSS 214 (654)
Q Consensus 184 ~~~~~L~~L~l~~N~l~g~~p~~~~~~~~l~ 214 (654)
..+++|+.|+|++|+|++..|..|.++++|.
T Consensus 215 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 245 (452)
T 3zyi_A 215 TPLVGLEELEMSGNHFPEIRPGSFHGLSSLK 245 (452)
T ss_dssp TTCTTCCEEECTTSCCSEECGGGGTTCTTCC
T ss_pred cccccccEEECcCCcCcccCcccccCccCCC
Confidence 2667777777777777777777766665543
No 296
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.69 E-value=3e-17 Score=166.05 Aligned_cols=143 Identities=20% Similarity=0.242 Sum_probs=127.1
Q ss_pred eEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccccccccchhhccccccceecc
Q 036334 69 FVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLDL 148 (654)
Q Consensus 69 ~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 148 (654)
.++.|+|++|++.+.. +..|.++++|++|+|++|.+++..+..|.++++|++|+|++|++++..+..|.++++|++|++
T Consensus 29 ~l~~L~ls~n~l~~~~-~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 29 STKNLDLSFNPLRHLG-SYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TCCEEECTTCCCCEEC-TTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CccEEECCCCcccccC-HhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 4899999999998644 446999999999999999999877789999999999999999999888899999999999999
Q ss_pred ccccccccCCCccccccccCccccccccccCC-CCCC--CCCCCCeEEccCCcccccCcccccCCCC
Q 036334 149 SSNNFSGKIPFDVNNLTHLTGLFLENNKFSGN-LPSI--NPANLRDFNVSNNNLNGSIPATLSKFPQ 212 (654)
Q Consensus 149 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~-~~~~--~~~~L~~L~l~~N~l~g~~p~~~~~~~~ 212 (654)
++|++++..+..+..+++|+.|++++|++++. +|.. .+++|+.|+|++|++++..+..+..+..
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 174 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQ 174 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHT
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhh
Confidence 99999987777899999999999999999874 3544 7899999999999999777776665443
No 297
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.69 E-value=1.8e-17 Score=176.51 Aligned_cols=171 Identities=17% Similarity=0.164 Sum_probs=136.3
Q ss_pred CCccCCCCCCC----ceeeEEcC------C----------CCeEEEeecCCCCccccCCcccccCCCCccEEEeccCCcc
Q 036334 47 VQWNASDSACN----WVGVECDA------N----------RSFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLS 106 (654)
Q Consensus 47 ~~W~~~~~~C~----w~gv~C~~------~----------~~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~ 106 (654)
.+|....+||. |.++.|+. . -..++.|+++++.+. .+|+..|..+++|++|+|++|.++
T Consensus 4 ~~~~~~~~C~~~~~~~~c~~~~~~i~~~~~~~~~~~~~~~l~~l~~l~l~~~~l~-~l~~~~~~~l~~L~~L~L~~n~i~ 82 (390)
T 3o6n_A 4 KPRQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIE 82 (390)
T ss_dssp ---CCEECBCC------EEEESCEECSSCCCCEESCSSGGGCCCSEEEEESCEES-EECTHHHHHCCCCSEEECTTSCCC
T ss_pred CCCCCccceehhhhhhccceeeeeeecccccccccccccccCCceEEEecCCchh-hCChhHhcccccCcEEECCCCccc
Confidence 56877767775 54444431 0 134677888888875 577767899999999999999999
Q ss_pred CcCCCCCCCccccccccccccccccccchhhccccccceeccccccccccCCCccccccccCccccccccccCCCCCC--
Q 036334 107 GEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLDLSSNNFSGKIPFDVNNLTHLTGLFLENNKFSGNLPSI-- 184 (654)
Q Consensus 107 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-- 184 (654)
+..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|+|+...+..|.++++|++|++++|++++..+..
T Consensus 83 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 162 (390)
T 3o6n_A 83 EIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQ 162 (390)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTS
T ss_pred ccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhcc
Confidence 877789999999999999999999988889999999999999999999544445689999999999999999888764
Q ss_pred CCCCCCeEEccCCcccccCcccccCCCCccccCC
Q 036334 185 NPANLRDFNVSNNNLNGSIPATLSKFPQSSFTGN 218 (654)
Q Consensus 185 ~~~~L~~L~l~~N~l~g~~p~~~~~~~~l~~~~n 218 (654)
.+++|+.|+|++|++++.-...+.++..+.+.+|
T Consensus 163 ~l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n 196 (390)
T 3o6n_A 163 ATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYN 196 (390)
T ss_dssp SCTTCCEEECCSSCCSBCCGGGCTTCSEEECCSS
T ss_pred CCCCCCEEECCCCcCCccccccccccceeecccc
Confidence 7899999999999999665455666666666555
No 298
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.68 E-value=2.6e-17 Score=153.36 Aligned_cols=135 Identities=22% Similarity=0.202 Sum_probs=118.7
Q ss_pred CeEEEeecCCCCcc-ccCCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccccccccchhhcccccccee
Q 036334 68 SFVYSLRLPGVGLV-GPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRL 146 (654)
Q Consensus 68 ~~v~~L~l~~~~l~-~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 146 (654)
.+++.|+|++|++. +.+|. .+..+++|++|+|++|.|++. ..|..+++|++|+|++|++++.+|..+..+++|++|
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~-~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEG-LTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSS-CCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred ccCCEEECCCCCCChhhHHH-HHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 34899999999998 77876 589999999999999999966 789999999999999999998889888889999999
Q ss_pred ccccccccccC-CCccccccccCccccccccccCCCC----CC-CCCCCCeEEccCCcccccCccc
Q 036334 147 DLSSNNFSGKI-PFDVNNLTHLTGLFLENNKFSGNLP----SI-NPANLRDFNVSNNNLNGSIPAT 206 (654)
Q Consensus 147 ~l~~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~~~----~~-~~~~L~~L~l~~N~l~g~~p~~ 206 (654)
+|++|+|++.. +..+..+++|+.|++++|.|++.++ .. .+++|+.|++++|.+. .+|..
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~-~~~~~ 165 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ-EAPDS 165 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC-BCCSS
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh-hcccc
Confidence 99999999642 2688999999999999999998877 23 7899999999999987 66643
No 299
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.68 E-value=3.1e-17 Score=185.03 Aligned_cols=158 Identities=20% Similarity=0.236 Sum_probs=137.1
Q ss_pred CCCCce----eeEEcCC---------CCeEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCccccc
Q 036334 54 SACNWV----GVECDAN---------RSFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLR 120 (654)
Q Consensus 54 ~~C~w~----gv~C~~~---------~~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 120 (654)
++|.|. .|.|++. ..+++.|+|++|.+.+..+ ..|.++++|++|+|++|.+++..|..|.++++|+
T Consensus 5 ~~c~~~~~~~~~~c~~~~l~~ip~~~~~~l~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~ 83 (606)
T 3vq2_A 5 NPCIEVVPNITYQCMDQKLSKVPDDIPSSTKNIDLSFNPLKILKS-YSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLS 83 (606)
T ss_dssp -CCEEEETTTEEECTTSCCSSCCTTSCTTCCEEECTTSCCCEECT-TTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCC
T ss_pred CCceecCCCCceEccCCCcccCCCCCCCCcCEEECCCCCcCEeCh-hhccCCccCcEEeCCCCcccccCHHHhhchhhcC
Confidence 456653 5777542 2458999999999986554 4699999999999999999988899999999999
Q ss_pred cccccccccccccchhhccccccceeccccccccccCCCccccccccCccccccccccC-CCCCC--CCCCCCeEEccCC
Q 036334 121 SLYLQSNQFSGVFPASVTRMNRLTRLDLSSNNFSGKIPFDVNNLTHLTGLFLENNKFSG-NLPSI--NPANLRDFNVSNN 197 (654)
Q Consensus 121 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~~~~--~~~~L~~L~l~~N 197 (654)
+|+|++|++++..|..|+++++|++|+|++|++++..+..++++++|++|+|++|++++ .+|.. .+++|++|+|++|
T Consensus 84 ~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n 163 (606)
T 3vq2_A 84 NLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYN 163 (606)
T ss_dssp EEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSS
T ss_pred EeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCC
Confidence 99999999999889999999999999999999998877889999999999999999986 44654 8999999999999
Q ss_pred cccccCcccccCCCC
Q 036334 198 NLNGSIPATLSKFPQ 212 (654)
Q Consensus 198 ~l~g~~p~~~~~~~~ 212 (654)
++++..|..++.+.+
T Consensus 164 ~l~~~~~~~~~~l~~ 178 (606)
T 3vq2_A 164 YIQTITVNDLQFLRE 178 (606)
T ss_dssp CCCEECTTTTHHHHH
T ss_pred cceecChhhhhhhhc
Confidence 999888887766553
No 300
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.68 E-value=3.8e-17 Score=178.77 Aligned_cols=157 Identities=22% Similarity=0.229 Sum_probs=134.7
Q ss_pred CceeeEEcCC---------CCeEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCcccccccccccc
Q 036334 57 NWVGVECDAN---------RSFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSN 127 (654)
Q Consensus 57 ~w~gv~C~~~---------~~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 127 (654)
.|..|.|... ...++.|+|++|.+.+..+ ..|.++++|++|+|++|.|++..|..|.++++|++|+|++|
T Consensus 12 ~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 12 QDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQ-DEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp TTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECT-TTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECH-hHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 3678888643 2357899999999987544 47999999999999999999888999999999999999999
Q ss_pred ccccccchhhccccccceeccccccccccCCCccccccccCccccccccccCCCCCC--CCCCCCeEEccCCcccccCcc
Q 036334 128 QFSGVFPASVTRMNRLTRLDLSSNNFSGKIPFDVNNLTHLTGLFLENNKFSGNLPSI--NPANLRDFNVSNNNLNGSIPA 205 (654)
Q Consensus 128 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~g~~p~ 205 (654)
++++..+..|.++++|++|+|++|++++..|..|..+++|+.|+|++|++++..+.. .+++|+.|+|++|++++..+.
T Consensus 91 ~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 170 (477)
T 2id5_A 91 RLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTE 170 (477)
T ss_dssp CCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHH
T ss_pred cCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChh
Confidence 999777777899999999999999999888999999999999999999999887754 789999999999999966555
Q ss_pred cccCCCCcc
Q 036334 206 TLSKFPQSS 214 (654)
Q Consensus 206 ~~~~~~~l~ 214 (654)
.|.++++|.
T Consensus 171 ~l~~l~~L~ 179 (477)
T 2id5_A 171 ALSHLHGLI 179 (477)
T ss_dssp HHTTCTTCC
T ss_pred HhcccCCCc
Confidence 666655543
No 301
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.67 E-value=9.8e-17 Score=163.46 Aligned_cols=148 Identities=24% Similarity=0.238 Sum_probs=125.0
Q ss_pred CeEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccccccccchhhccccccceec
Q 036334 68 SFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLD 147 (654)
Q Consensus 68 ~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 147 (654)
..++.|+|++|.+.+..+ ..|.++++|++|+|++|.|++..+ . +.+++|++|+|++|+|+ .+|..+..+++|++|+
T Consensus 31 ~~l~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~-~-~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~ 106 (290)
T 1p9a_G 31 KDTTILHLSENLLYTFSL-ATLMPYTRLTQLNLDRAELTKLQV-D-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLD 106 (290)
T ss_dssp TTCCEEECTTSCCSEEEG-GGGTTCTTCCEEECTTSCCCEEEC-C-SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEE
T ss_pred CCCCEEEcCCCcCCccCH-HHhhcCCCCCEEECCCCccCcccC-C-CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEE
Confidence 358899999999976554 479999999999999999995433 3 88999999999999999 7888999999999999
Q ss_pred cccccccccCCCccccccccCccccccccccCCCCCC--CCCCCCeEEccCCcccccCcccccCCCC---ccccCCC
Q 036334 148 LSSNNFSGKIPFDVNNLTHLTGLFLENNKFSGNLPSI--NPANLRDFNVSNNNLNGSIPATLSKFPQ---SSFTGNL 219 (654)
Q Consensus 148 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~g~~p~~~~~~~~---l~~~~n~ 219 (654)
|++|+|++..|..|..+++|+.|+|++|+|++.++.. .+++|+.|+|++|+|++..+..|.++++ |.+.+|.
T Consensus 107 l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~ 183 (290)
T 1p9a_G 107 VSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENS 183 (290)
T ss_dssp CCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSC
T ss_pred CCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCc
Confidence 9999999777788999999999999999999888765 7899999999999999544445555555 4455553
No 302
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.67 E-value=5.7e-17 Score=182.88 Aligned_cols=156 Identities=18% Similarity=0.159 Sum_probs=137.7
Q ss_pred ceeeEEcCC---------CCeEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccc
Q 036334 58 WVGVECDAN---------RSFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQ 128 (654)
Q Consensus 58 w~gv~C~~~---------~~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 128 (654)
+.-+.|.+. ...++.|+|++|.+.+..+ ..|.++++|++|+|++|.+++..|..|.++++|++|+|++|+
T Consensus 14 ~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~ 92 (606)
T 3t6q_A 14 NKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQN-TTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANP 92 (606)
T ss_dssp TTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECT-TTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred CceEECCCCCcccCcCCCCCcCcEEEccCCccCcCCh-hHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCc
Confidence 445778642 2358999999999986544 479999999999999999999889999999999999999999
Q ss_pred cccccchhhccccccceeccccccccccCCCccccccccCccccccccccCCC-CCC-CCCCCCeEEccCCcccccCccc
Q 036334 129 FSGVFPASVTRMNRLTRLDLSSNNFSGKIPFDVNNLTHLTGLFLENNKFSGNL-PSI-NPANLRDFNVSNNNLNGSIPAT 206 (654)
Q Consensus 129 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~-~~~-~~~~L~~L~l~~N~l~g~~p~~ 206 (654)
+++..|..|+++++|++|+|++|+|++..|..+.++++|++|+|++|++++.. |.. .+++|+.|+|++|++++..|..
T Consensus 93 l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 172 (606)
T 3t6q_A 93 LIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKED 172 (606)
T ss_dssp CSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHH
T ss_pred ccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhh
Confidence 99999999999999999999999999877888999999999999999999853 444 7899999999999999888888
Q ss_pred ccCCCCcc
Q 036334 207 LSKFPQSS 214 (654)
Q Consensus 207 ~~~~~~l~ 214 (654)
++.++++.
T Consensus 173 ~~~l~~L~ 180 (606)
T 3t6q_A 173 MSSLQQAT 180 (606)
T ss_dssp HHTTTTCC
T ss_pred hhhhcccc
Confidence 87777654
No 303
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.67 E-value=1e-16 Score=173.50 Aligned_cols=155 Identities=19% Similarity=0.217 Sum_probs=100.6
Q ss_pred ceeeEEcCC---------CCeEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccc
Q 036334 58 WVGVECDAN---------RSFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQ 128 (654)
Q Consensus 58 w~gv~C~~~---------~~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 128 (654)
|..|.|.+. ...++.|+|++|.+.+..+ ..|.++++|++|+|++|.|++..+..|.++++|++|+|++|+
T Consensus 45 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~-~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~ 123 (440)
T 3zyj_A 45 FSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKV-NSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNR 123 (440)
T ss_dssp SCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECT-TTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSC
T ss_pred CCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCH-HHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCc
Confidence 567777642 1346778888888875443 467888888888888888876666777778888888888888
Q ss_pred cccccchhhccccccceeccccccccccCCCcccc-------------------------ccccCccccccccccCCCCC
Q 036334 129 FSGVFPASVTRMNRLTRLDLSSNNFSGKIPFDVNN-------------------------LTHLTGLFLENNKFSGNLPS 183 (654)
Q Consensus 129 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-------------------------l~~L~~L~l~~N~l~~~~~~ 183 (654)
|++..+..|..+++|++|+|++|+|++..+..|.+ +++|+.|+|++|+|+..+..
T Consensus 124 l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~ 203 (440)
T 3zyj_A 124 LTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNL 203 (440)
T ss_dssp CSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSCCCC
T ss_pred CCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcccccc
Confidence 87666667777777777777777777544444444 44555555555555533222
Q ss_pred CCCCCCCeEEccCCcccccCcccccCCCCc
Q 036334 184 INPANLRDFNVSNNNLNGSIPATLSKFPQS 213 (654)
Q Consensus 184 ~~~~~L~~L~l~~N~l~g~~p~~~~~~~~l 213 (654)
..+++|+.|+|++|+|++..|..|.++++|
T Consensus 204 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 233 (440)
T 3zyj_A 204 TPLIKLDELDLSGNHLSAIRPGSFQGLMHL 233 (440)
T ss_dssp TTCSSCCEEECTTSCCCEECTTTTTTCTTC
T ss_pred CCCcccCEEECCCCccCccChhhhccCccC
Confidence 255566666666666665555555554443
No 304
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.66 E-value=1.1e-16 Score=173.79 Aligned_cols=132 Identities=20% Similarity=0.212 Sum_probs=65.2
Q ss_pred CCccEEEeccCCccCcCCCCCCCccccccccccccccccccchhhccccccceeccccccccccCCCccccccccCcccc
Q 036334 93 SQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLDLSSNNFSGKIPFDVNNLTHLTGLFL 172 (654)
Q Consensus 93 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 172 (654)
++|++|+|++|.+++.+|..|.++++|++|+|++|++++..|..|.++++|++|+|++|+|++..|..+..+++|+.|+|
T Consensus 275 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 354 (455)
T 3v47_A 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDL 354 (455)
T ss_dssp SCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEEC
T ss_pred cCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEEC
Confidence 34555555555555555555555555555555555555544555555555555555555555444444555555555555
Q ss_pred ccccccCCCCCC--CCCCCCeEEccCCcccccCcccccCC---CCccccCCCCCCCC
Q 036334 173 ENNKFSGNLPSI--NPANLRDFNVSNNNLNGSIPATLSKF---PQSSFTGNLDLCGG 224 (654)
Q Consensus 173 ~~N~l~~~~~~~--~~~~L~~L~l~~N~l~g~~p~~~~~~---~~l~~~~n~~~c~~ 224 (654)
++|+|++..|.. .+++|++|+|++|+|++..+..+..+ ..+.+.+|+..|.+
T Consensus 355 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 411 (455)
T 3v47_A 355 SYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 411 (455)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCT
T ss_pred CCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCC
Confidence 555555444432 44555555555555553333233322 22334445544443
No 305
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.66 E-value=1.8e-16 Score=171.67 Aligned_cols=157 Identities=23% Similarity=0.284 Sum_probs=91.4
Q ss_pred eEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccccccccch-------------
Q 036334 69 FVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPA------------- 135 (654)
Q Consensus 69 ~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~------------- 135 (654)
+++.|+|++|.+.+ +++..|.++++|++|+|++|.|++..+..|.++++|++|+|++|++++..+.
T Consensus 89 ~L~~L~Ls~n~i~~-i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l 167 (440)
T 3zyj_A 89 HLEILQLSRNHIRT-IEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDL 167 (440)
T ss_dssp SCCEEECCSSCCCE-ECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCc-cChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCC
Confidence 35666666666553 3333455566666666666666544444455555555555555555433221
Q ss_pred ------------hhccccc----------------------cceeccccccccccCCCccccccccCccccccccccCCC
Q 036334 136 ------------SVTRMNR----------------------LTRLDLSSNNFSGKIPFDVNNLTHLTGLFLENNKFSGNL 181 (654)
Q Consensus 136 ------------~~~~l~~----------------------L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 181 (654)
.|.++++ |+.|+|++|+|++..|..|.++++|+.|+|++|+|++..
T Consensus 168 ~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 247 (440)
T 3zyj_A 168 GELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIE 247 (440)
T ss_dssp CCCTTCCEECTTTTTTCSSCCEEECTTSCCSSCCCCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEEC
T ss_pred CCCCCcceeCcchhhcccccCeecCCCCcCccccccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEC
Confidence 2333444 444444455555555556666666666666666666655
Q ss_pred CCC--CCCCCCeEEccCCcccccCcccccCC---CCccccCCCCCCCCCC
Q 036334 182 PSI--NPANLRDFNVSNNNLNGSIPATLSKF---PQSSFTGNLDLCGGPL 226 (654)
Q Consensus 182 ~~~--~~~~L~~L~l~~N~l~g~~p~~~~~~---~~l~~~~n~~~c~~~~ 226 (654)
+.. .+++|+.|+|++|+|++..+..|..+ ..+.+.+|++.|+|..
T Consensus 248 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~l 297 (440)
T 3zyj_A 248 RNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCDI 297 (440)
T ss_dssp TTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECSSTT
T ss_pred hhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCCCCc
Confidence 543 67788888888888885555555544 4456778888887653
No 306
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.66 E-value=1.5e-16 Score=172.77 Aligned_cols=157 Identities=22% Similarity=0.244 Sum_probs=98.8
Q ss_pred CeEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccccccccch------------
Q 036334 68 SFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPA------------ 135 (654)
Q Consensus 68 ~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~------------ 135 (654)
.+++.|+|++|.+.+.. +..|.++++|++|+|++|.|++..+..|.++++|++|+|++|++++..+.
T Consensus 99 ~~L~~L~Ls~n~i~~~~-~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 177 (452)
T 3zyi_A 99 HHLEVLQLGRNSIRQIE-VGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLD 177 (452)
T ss_dssp TTCCEEECCSSCCCEEC-TTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccCCcC-hhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEe
Confidence 34677777777776533 33577777777777777777755555566677777777777666643332
Q ss_pred -------------hhcccccccee----------------------ccccccccccCCCccccccccCccccccccccCC
Q 036334 136 -------------SVTRMNRLTRL----------------------DLSSNNFSGKIPFDVNNLTHLTGLFLENNKFSGN 180 (654)
Q Consensus 136 -------------~~~~l~~L~~L----------------------~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 180 (654)
.|.++++|++| +|++|+|++..|..|.++++|+.|+|++|+|++.
T Consensus 178 l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 257 (452)
T 3zyi_A 178 LGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMPNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLI 257 (452)
T ss_dssp CCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSCCCCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEE
T ss_pred CCCCCCccccChhhccCCCCCCEEECCCCcccccccccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceE
Confidence 23344444444 4444445444455566666666666666666666
Q ss_pred CCCC--CCCCCCeEEccCCcccccCcccccCC---CCccccCCCCCCCCC
Q 036334 181 LPSI--NPANLRDFNVSNNNLNGSIPATLSKF---PQSSFTGNLDLCGGP 225 (654)
Q Consensus 181 ~~~~--~~~~L~~L~l~~N~l~g~~p~~~~~~---~~l~~~~n~~~c~~~ 225 (654)
.+.. .+++|+.|+|++|+|++..+..|..+ ..+.+.+|++.|+|.
T Consensus 258 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 307 (452)
T 3zyi_A 258 ERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCD 307 (452)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECSTT
T ss_pred CHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCCC
Confidence 5543 66788888888888885555555444 445677888888765
No 307
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.66 E-value=1.5e-16 Score=151.89 Aligned_cols=126 Identities=25% Similarity=0.295 Sum_probs=111.6
Q ss_pred EeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccccccccchhhccccccceeccccc
Q 036334 72 SLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLDLSSN 151 (654)
Q Consensus 72 ~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N 151 (654)
.++++++++. .+|.. + .++|++|+|++|.|+ .+|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 14 ~l~~~~~~l~-~ip~~-~--~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKG-I--PRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp EEECTTSCCS-SCCSC-C--CTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred EEEcCCCCCC-cCCCC-C--CCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 4677777775 56653 3 368999999999998 78889999999999999999999888889999999999999999
Q ss_pred cccccCCCccccccccCccccccccccCCCCCC--CCCCCCeEEccCCccccc
Q 036334 152 NFSGKIPFDVNNLTHLTGLFLENNKFSGNLPSI--NPANLRDFNVSNNNLNGS 202 (654)
Q Consensus 152 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~g~ 202 (654)
+|++..|..|..+++|+.|+|++|+|++.++.. .+++|+.|+|++|++...
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~ 141 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCD 141 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecC
Confidence 999888889999999999999999999888764 789999999999999743
No 308
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.66 E-value=1.6e-16 Score=163.68 Aligned_cols=147 Identities=20% Similarity=0.221 Sum_probs=68.9
Q ss_pred EEEeecCCCCccccCCcccccCCCCccEEEeccCCccCc--C--CCCCCCccccccccccccccccccch----hhcccc
Q 036334 70 VYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGE--I--PSDFSNLTLLRSLYLQSNQFSGVFPA----SVTRMN 141 (654)
Q Consensus 70 v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~--~--p~~~~~l~~L~~L~Ls~N~l~~~~p~----~~~~l~ 141 (654)
++.|+|++|.+.+.. +..|+.+++|++|+|++|.+.+. + +..++++++|++|+|++|+++ .++. .+..++
T Consensus 147 L~~L~Ls~n~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~ 224 (310)
T 4glp_A 147 LKVLSIAQAHSPAFS-CEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAGV 224 (310)
T ss_dssp CCEEEEECCSSCCCC-TTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTC
T ss_pred CCEEEeeCCCcchhh-HHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcCC
Confidence 455555555553322 22355555555555555554431 1 112244555555555555554 2222 134455
Q ss_pred ccceeccccccccccCCCccccc---cccCccccccccccCCCCCCCCCCCCeEEccCCcccc-cCcccccCCCCccccC
Q 036334 142 RLTRLDLSSNNFSGKIPFDVNNL---THLTGLFLENNKFSGNLPSINPANLRDFNVSNNNLNG-SIPATLSKFPQSSFTG 217 (654)
Q Consensus 142 ~L~~L~l~~N~l~~~~p~~~~~l---~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~g-~~p~~~~~~~~l~~~~ 217 (654)
+|++|+|++|+|++..|..+..+ ++|+.|+|++|+|+. +|....++|+.|+|++|+|++ ..+..+.++..|.+.+
T Consensus 225 ~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~~-lp~~~~~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~L~~ 303 (310)
T 4glp_A 225 QPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQ-VPKGLPAKLRVLDLSSNRLNRAPQPDELPEVDNLTLDG 303 (310)
T ss_dssp CCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCCS-CCSCCCSCCSCEECCSCCCCSCCCTTSCCCCSCEECSS
T ss_pred CCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCCc-hhhhhcCCCCEEECCCCcCCCCchhhhCCCccEEECcC
Confidence 55555555555555445444444 355555555555552 232223455555555555554 2333344444444444
Q ss_pred CC
Q 036334 218 NL 219 (654)
Q Consensus 218 n~ 219 (654)
|+
T Consensus 304 N~ 305 (310)
T 4glp_A 304 NP 305 (310)
T ss_dssp TT
T ss_pred CC
Confidence 43
No 309
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.65 E-value=1.3e-16 Score=179.87 Aligned_cols=145 Identities=23% Similarity=0.210 Sum_probs=93.0
Q ss_pred CeEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCC-CCCccccccccccccccccccchhhcccccccee
Q 036334 68 SFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSD-FSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRL 146 (654)
Q Consensus 68 ~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 146 (654)
.+++.|+|++|.+.+..+. .|..+++|++|+|++|.+++..|.. |.++++|++|+|++|++++..|..+..+++|++|
T Consensus 376 ~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 454 (606)
T 3t6q_A 376 SHLQSLNLSYNEPLSLKTE-AFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHL 454 (606)
T ss_dssp TTCCEEECCSCSCEEECTT-TTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEE
T ss_pred CCCCEEECCCCcCCcCCHH-HhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEE
Confidence 3467777777777654443 4666777777777777776555443 6666777777777777766666666666677777
Q ss_pred cccccccccc---CCCccccccccCccccccccccCCCCCC--CCCCCCeEEccCCcccccCcccccCCCCc
Q 036334 147 DLSSNNFSGK---IPFDVNNLTHLTGLFLENNKFSGNLPSI--NPANLRDFNVSNNNLNGSIPATLSKFPQS 213 (654)
Q Consensus 147 ~l~~N~l~~~---~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~g~~p~~~~~~~~l 213 (654)
+|++|.+++. .+..+..+++|+.|+|++|++++.+|.. .+++|+.|+|++|++++..|..+.+++.+
T Consensus 455 ~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L 526 (606)
T 3t6q_A 455 NLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI 526 (606)
T ss_dssp ECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC
T ss_pred ECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc
Confidence 7777666652 2244666666666666666666665543 56666666666666666666666655544
No 310
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.65 E-value=1.7e-16 Score=179.52 Aligned_cols=157 Identities=22% Similarity=0.199 Sum_probs=140.4
Q ss_pred eEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCcccccccccccccc-ccccchhhccccccceec
Q 036334 69 FVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQF-SGVFPASVTRMNRLTRLD 147 (654)
Q Consensus 69 ~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l-~~~~p~~~~~l~~L~~L~ 147 (654)
.+..+++..++.....+...+..+++|+.++++.|.+.+..+..+..+++|+.|+|++|++ .+.+|..|..+++|++|+
T Consensus 421 ~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~ 500 (635)
T 4g8a_A 421 QLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLD 500 (635)
T ss_dssp TCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEE
T ss_pred cccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEE
Confidence 4667788888877777777789999999999999999999999999999999999999985 456888999999999999
Q ss_pred cccccccccCCCccccccccCccccccccccCCCCCC--CCCCCCeEEccCCcccccCcccccCC----CCccccCCCCC
Q 036334 148 LSSNNFSGKIPFDVNNLTHLTGLFLENNKFSGNLPSI--NPANLRDFNVSNNNLNGSIPATLSKF----PQSSFTGNLDL 221 (654)
Q Consensus 148 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~g~~p~~~~~~----~~l~~~~n~~~ 221 (654)
|++|+|++..|..|.++++|+.|+|++|+|++.++.. .+++|+.|+|++|+|++..|..+..+ ..+...+|++.
T Consensus 501 Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~ 580 (635)
T 4g8a_A 501 LSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFA 580 (635)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBC
T ss_pred CCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCc
Confidence 9999999999999999999999999999999988865 88999999999999999999887655 45678899999
Q ss_pred CCCC
Q 036334 222 CGGP 225 (654)
Q Consensus 222 c~~~ 225 (654)
|+|.
T Consensus 581 C~C~ 584 (635)
T 4g8a_A 581 CTCE 584 (635)
T ss_dssp CSGG
T ss_pred ccCC
Confidence 9765
No 311
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.65 E-value=2.1e-16 Score=184.98 Aligned_cols=161 Identities=24% Similarity=0.198 Sum_probs=136.7
Q ss_pred CCceeeEEcCCCCeEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcC-CCCCCCccccccccccccccccccc
Q 036334 56 CNWVGVECDANRSFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEI-PSDFSNLTLLRSLYLQSNQFSGVFP 134 (654)
Q Consensus 56 C~w~gv~C~~~~~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p 134 (654)
|+|..|.+ -..+++.|+|++|.+.+..+. .|.++++|++|+|++|.+.+.+ |..|.++++|++|+|++|++++..|
T Consensus 14 ~~L~~vP~--lp~~l~~LdLs~N~i~~i~~~-~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p 90 (844)
T 3j0a_A 14 CNLTQVPQ--VLNTTERLLLSFNYIRTVTAS-SFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHP 90 (844)
T ss_dssp CCSSCCCS--SCTTCCEEEEESCCCCEECSS-SCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECT
T ss_pred CCCCCCCC--CCCCcCEEECCCCcCCccChh-HCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCH
Confidence 45666665 335699999999999876554 6999999999999999777676 7789999999999999999999999
Q ss_pred hhhccccccceeccccccccccCCCc--cccccccCccccccccccCCCCC--C-CCCCCCeEEccCCcccccCccccc-
Q 036334 135 ASVTRMNRLTRLDLSSNNFSGKIPFD--VNNLTHLTGLFLENNKFSGNLPS--I-NPANLRDFNVSNNNLNGSIPATLS- 208 (654)
Q Consensus 135 ~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~l~~L~~L~l~~N~l~~~~~~--~-~~~~L~~L~l~~N~l~g~~p~~~~- 208 (654)
..|.++++|++|+|++|.+++.+|.. +.++++|+.|+|++|++++..+. + .+++|+.|+|++|.+++..|..+.
T Consensus 91 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~ 170 (844)
T 3j0a_A 91 DAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEP 170 (844)
T ss_dssp TSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHH
T ss_pred hHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHccc
Confidence 99999999999999999999877765 89999999999999999987653 3 899999999999999988888775
Q ss_pred ----CCCCccccCCC
Q 036334 209 ----KFPQSSFTGNL 219 (654)
Q Consensus 209 ----~~~~l~~~~n~ 219 (654)
++..+.+.+|.
T Consensus 171 l~~~~L~~L~L~~n~ 185 (844)
T 3j0a_A 171 LQGKTLSFFSLAANS 185 (844)
T ss_dssp HHHCSSCCCEECCSB
T ss_pred ccCCccceEECCCCc
Confidence 44555555553
No 312
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.64 E-value=6.9e-17 Score=147.23 Aligned_cols=126 Identities=22% Similarity=0.202 Sum_probs=104.1
Q ss_pred CeEEEeecCCCCcc-ccCCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccccccccchhhcccccccee
Q 036334 68 SFVYSLRLPGVGLV-GPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRL 146 (654)
Q Consensus 68 ~~v~~L~l~~~~l~-~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 146 (654)
.+++.|++++|++. +.+|. .+..+++|++|+|++|.+++. ..|.++++|++|+|++|++++.+|..+..+++|++|
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~-~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEG-LTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCS-CCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred ccCeEEEccCCcCChhHHHH-HHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 34888999999988 67776 578899999999999998865 678889999999999999998788888888999999
Q ss_pred cccccccccc-CCCccccccccCccccccccccCCCC---C-C-CCCCCCeEEccC
Q 036334 147 DLSSNNFSGK-IPFDVNNLTHLTGLFLENNKFSGNLP---S-I-NPANLRDFNVSN 196 (654)
Q Consensus 147 ~l~~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~~---~-~-~~~~L~~L~l~~ 196 (654)
+|++|+|++. .+..+..+++|+.|++++|++++.++ . . .+++|+.|++++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 9999998863 34678888889999999998888776 2 2 678888888764
No 313
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.64 E-value=1.1e-16 Score=153.40 Aligned_cols=143 Identities=15% Similarity=0.256 Sum_probs=107.4
Q ss_pred EEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccccccccchhhccccccceeccc
Q 036334 70 VYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLDLS 149 (654)
Q Consensus 70 v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 149 (654)
++.|+|++|++. .++ .+..+++|++|+|++|.++ .+ ..+.++++|++|+|++|++++..|..+..+++|++|+|+
T Consensus 46 L~~L~l~~n~i~-~l~--~l~~l~~L~~L~l~~n~~~-~~-~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls 120 (197)
T 4ezg_A 46 LTYITLANINVT-DLT--GIEYAHNIKDLTINNIHAT-NY-NPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDIS 120 (197)
T ss_dssp CCEEEEESSCCS-CCT--TGGGCTTCSEEEEESCCCS-CC-GGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECC
T ss_pred ccEEeccCCCcc-ChH--HHhcCCCCCEEEccCCCCC-cc-hhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEec
Confidence 778888888887 455 3788888888888888765 23 378888888888888888888778888888888888888
Q ss_pred cccccccCCCccccccccCcccccccc-ccCCCCCCCCCCCCeEEccCCcccccCcccccCCC---CccccCCC
Q 036334 150 SNNFSGKIPFDVNNLTHLTGLFLENNK-FSGNLPSINPANLRDFNVSNNNLNGSIPATLSKFP---QSSFTGNL 219 (654)
Q Consensus 150 ~N~l~~~~p~~~~~l~~L~~L~l~~N~-l~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~~~---~l~~~~n~ 219 (654)
+|++++..|..+..+++|+.|+|++|+ ++...+-..+++|+.|+|++|++++ ++ .+..++ .|.+.+|.
T Consensus 121 ~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 121 HSAHDDSILTKINTLPKVNSIDLSYNGAITDIMPLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp SSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCGGGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC-
T ss_pred CCccCcHhHHHHhhCCCCCEEEccCCCCccccHhhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcc
Confidence 888887777778888888888888887 5554322277888888888888874 43 444444 44444543
No 314
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.64 E-value=5.4e-17 Score=183.88 Aligned_cols=149 Identities=19% Similarity=0.320 Sum_probs=134.7
Q ss_pred CeEEEeecCCCCcccc-----------------CCccccc--CCCCccEEEeccCCccCcCCCCCCCccccccccccccc
Q 036334 68 SFVYSLRLPGVGLVGP-----------------IPPNTLG--KLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQ 128 (654)
Q Consensus 68 ~~v~~L~l~~~~l~~~-----------------~~~~~l~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 128 (654)
.+++.|+|++|.+.|. +|. .++ ++++|++|+|++|.+.|.+|..|+++++|++|+|++|+
T Consensus 206 ~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~-~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~ 284 (636)
T 4eco_A 206 TKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTE-DLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNR 284 (636)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTS-CCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCT
T ss_pred cCCCEEECcCCccccccccccccccccchhcccCch-hhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCC
Confidence 4589999999999996 887 588 99999999999999999999999999999999999999
Q ss_pred -ccc-ccchhhccc------cccceeccccccccccCCC--ccccccccCccccccccccCCCCCC-CCCCCCeEEccCC
Q 036334 129 -FSG-VFPASVTRM------NRLTRLDLSSNNFSGKIPF--DVNNLTHLTGLFLENNKFSGNLPSI-NPANLRDFNVSNN 197 (654)
Q Consensus 129 -l~~-~~p~~~~~l------~~L~~L~l~~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~L~~L~l~~N 197 (654)
++| .+|..++.+ ++|++|+|++|+++ .+|. .++++++|+.|+|++|+++|.+|.+ .+++|+.|+|++|
T Consensus 285 ~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip~~~~l~~L~~L~L~~N 363 (636)
T 4eco_A 285 GISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLPAFGSEIKLASLNLAYN 363 (636)
T ss_dssp TSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECCCCEEEEEESEEECCSS
T ss_pred CCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchhhhCCCCCCCEEECCCC
Confidence 999 899999887 99999999999999 8998 8999999999999999999888855 7889999999999
Q ss_pred cccccCcccccCCCC-c---cccCCC
Q 036334 198 NLNGSIPATLSKFPQ-S---SFTGNL 219 (654)
Q Consensus 198 ~l~g~~p~~~~~~~~-l---~~~~n~ 219 (654)
+++ .+|..+.+++. | .+.+|.
T Consensus 364 ~l~-~lp~~l~~l~~~L~~L~Ls~N~ 388 (636)
T 4eco_A 364 QIT-EIPANFCGFTEQVENLSFAHNK 388 (636)
T ss_dssp EEE-ECCTTSEEECTTCCEEECCSSC
T ss_pred ccc-cccHhhhhhcccCcEEEccCCc
Confidence 999 89988776655 4 444554
No 315
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.64 E-value=1.7e-16 Score=156.88 Aligned_cols=146 Identities=14% Similarity=0.186 Sum_probs=122.8
Q ss_pred eEEEeecCCCCccccCCcccccCCCCccEEEeccCC-ccCcCCCCCCCccccccccccc-cccccccchhhcccccccee
Q 036334 69 FVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNR-LSGEIPSDFSNLTLLRSLYLQS-NQFSGVFPASVTRMNRLTRL 146 (654)
Q Consensus 69 ~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L 146 (654)
.++.|+|++|++.+ +++..|.++++|++|+|++|. +++..+..|.++++|++|+|++ |++++..+..|.++++|++|
T Consensus 32 ~l~~L~l~~n~l~~-i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 32 STQTLKLIETHLRT-IPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TCCEEEEESCCCSE-ECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred cccEEEEeCCcceE-ECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 58999999999975 555579999999999999997 8866667899999999999999 99998777889999999999
Q ss_pred ccccccccccCCCccccccccC---ccccccc-cccCCCCCC--CCCCCC-eEEccCCcccccCcccccC---CCCcccc
Q 036334 147 DLSSNNFSGKIPFDVNNLTHLT---GLFLENN-KFSGNLPSI--NPANLR-DFNVSNNNLNGSIPATLSK---FPQSSFT 216 (654)
Q Consensus 147 ~l~~N~l~~~~p~~~~~l~~L~---~L~l~~N-~l~~~~~~~--~~~~L~-~L~l~~N~l~g~~p~~~~~---~~~l~~~ 216 (654)
+|++|++++ +|. +..+++|+ .|++++| ++++..+.. .+++|+ .|+|++|+++ .+|..... +..+.+.
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~ 187 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLN 187 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECT
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcC
Confidence 999999995 776 88888888 9999999 999887764 788999 9999999998 77754332 3344455
Q ss_pred CC
Q 036334 217 GN 218 (654)
Q Consensus 217 ~n 218 (654)
+|
T Consensus 188 ~n 189 (239)
T 2xwt_C 188 KN 189 (239)
T ss_dssp TC
T ss_pred CC
Confidence 55
No 316
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.63 E-value=5.2e-16 Score=177.54 Aligned_cols=156 Identities=21% Similarity=0.228 Sum_probs=122.1
Q ss_pred EEEeecCCCCcc--ccCCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccccccccc--------hhhcc
Q 036334 70 VYSLRLPGVGLV--GPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFP--------ASVTR 139 (654)
Q Consensus 70 v~~L~l~~~~l~--~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p--------~~~~~ 139 (654)
++.|++++|.+. +.+|. .|.++++|++|+|++|.|++..+..|.++++|++|+|++|++++..+ ..|.+
T Consensus 456 L~~L~l~~n~l~~~~~~p~-~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~ 534 (680)
T 1ziw_A 456 LQRLMLRRVALKNVDSSPS-PFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKG 534 (680)
T ss_dssp CCEEECTTSCCBCTTCSSC-TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTT
T ss_pred cccchhccccccccccCCc-ccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcC
Confidence 334444444443 33443 57888889999999999887777778889999999999998886532 23778
Q ss_pred ccccceeccccccccccCCCccccccccCccccccccccCCCCCC--CCCCCCeEEccCCcccccCccc----ccCCCCc
Q 036334 140 MNRLTRLDLSSNNFSGKIPFDVNNLTHLTGLFLENNKFSGNLPSI--NPANLRDFNVSNNNLNGSIPAT----LSKFPQS 213 (654)
Q Consensus 140 l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~g~~p~~----~~~~~~l 213 (654)
+++|+.|+|++|+|+...+..|.++++|+.|+|++|+|++.++.. .+++|+.|+|++|+|++..|.. +.++..+
T Consensus 535 l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l 614 (680)
T 1ziw_A 535 LSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTEL 614 (680)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEE
T ss_pred CCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEE
Confidence 899999999999999444456899999999999999999877765 7899999999999999777764 4577778
Q ss_pred cccCCCCCCCCCC
Q 036334 214 SFTGNLDLCGGPL 226 (654)
Q Consensus 214 ~~~~n~~~c~~~~ 226 (654)
.+.+|++.|+|+.
T Consensus 615 ~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 615 DMRFNPFDCTCES 627 (680)
T ss_dssp ECTTCCCCBCCCC
T ss_pred EccCCCcccCCcc
Confidence 8899999998763
No 317
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.63 E-value=5.2e-16 Score=161.64 Aligned_cols=134 Identities=13% Similarity=0.161 Sum_probs=96.1
Q ss_pred hhccccccCceeEEEEEecCCcEEEEEEecccccC---------------HHH--------HHHHHHHHhccCCCccccc
Q 036334 350 SAEVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVG---------------KRE--------FEMQMEVLGKIKHDNVVPL 406 (654)
Q Consensus 350 ~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~---------------~~~--------~~~e~~~l~~l~hpniv~l 406 (654)
+.+.||+|+||.||+|...+|+.||||+++..... ... .++|...|.++.+.++.-.
T Consensus 99 I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~vp 178 (397)
T 4gyi_A 99 VGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFPVP 178 (397)
T ss_dssp EEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCSCC
T ss_pred ecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 46789999999999999989999999998642110 111 1345555555544333221
Q ss_pred cEEEEeCCceEEEEEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCcEEECCCCC-
Q 036334 407 RAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASNILLRPDHD- 485 (654)
Q Consensus 407 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~NIll~~~~~- 485 (654)
.-+.. ...+|||||++++.|..+... .....++.|++.+|.|||..+ ||||||||.|||+++++.
T Consensus 179 ~p~~~--~~~~LVME~i~G~~L~~l~~~-----------~~~~~l~~qll~~l~~lH~~g-IVHrDLKp~NILl~~dgd~ 244 (397)
T 4gyi_A 179 EPIAQ--SRHTIVMSLVDALPMRQVSSV-----------PDPASLYADLIALILRLAKHG-LIHGDFNEFNILIREEKDA 244 (397)
T ss_dssp CEEEE--ETTEEEEECCSCEEGGGCCCC-----------SCHHHHHHHHHHHHHHHHHTT-EECSCCSTTSEEEEEEECS
T ss_pred eeeec--cCceEEEEecCCccHhhhccc-----------HHHHHHHHHHHHHHHHHHHCC-CcCCCCCHHHEEEeCCCCc
Confidence 11111 234799999999888765431 124568899999999999988 999999999999988763
Q ss_pred ---------eEEeccCCCCCc
Q 036334 486 ---------ACVSDFGLNPLF 497 (654)
Q Consensus 486 ---------~kl~Dfgla~~~ 497 (654)
+.|+||+-+...
T Consensus 245 ~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 245 EDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp SCTTSEEEEEEECCCTTCEET
T ss_pred ccccccccceEEEEeCCcccC
Confidence 789999976543
No 318
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.63 E-value=2.5e-16 Score=176.06 Aligned_cols=155 Identities=21% Similarity=0.238 Sum_probs=122.3
Q ss_pred CCeEEEeecCCCCccccCCcccccCCCCccEEEeccCCccC--cCCCCCCCccccccccccccccccccch-hhcccccc
Q 036334 67 RSFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSG--EIPSDFSNLTLLRSLYLQSNQFSGVFPA-SVTRMNRL 143 (654)
Q Consensus 67 ~~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L 143 (654)
..+++.|+|++|.+.+.++. .++++++|++|+|++|.+++ .+|..|.++++|++|+|++|++++.+|. .+..+++|
T Consensus 352 l~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L 430 (562)
T 3a79_B 352 PSSFTFLNFTQNVFTDSVFQ-GCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESI 430 (562)
T ss_dssp CCCCCEEECCSSCCCTTTTT-TCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTC
T ss_pred CCCceEEECCCCccccchhh-hhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccC
Confidence 34588899999988887765 58889999999999998886 3456788889999999999999875554 47788899
Q ss_pred ceeccccccccccCCCccccccccCccccccccccCCCCCC-CCCCCCeEEccCCcccccCccc-ccCCC---CccccCC
Q 036334 144 TRLDLSSNNFSGKIPFDVNNLTHLTGLFLENNKFSGNLPSI-NPANLRDFNVSNNNLNGSIPAT-LSKFP---QSSFTGN 218 (654)
Q Consensus 144 ~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~L~~L~l~~N~l~g~~p~~-~~~~~---~l~~~~n 218 (654)
+.|+|++|+|++.+|..+. ++|+.|+|++|+|+..++.. .+++|+.|+|++|+|+ .+|.. +..++ .+.+.+|
T Consensus 431 ~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N 507 (562)
T 3a79_B 431 LVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIMSIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDN 507 (562)
T ss_dssp CEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCCCCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEECCSC
T ss_pred CEEECCCCCCCcchhhhhc--CcCCEEECCCCcCcccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEecCC
Confidence 9999999999887776654 68899999999998655555 7889999999999998 67765 55544 4567788
Q ss_pred CCCCCCC
Q 036334 219 LDLCGGP 225 (654)
Q Consensus 219 ~~~c~~~ 225 (654)
+..|.++
T Consensus 508 ~~~c~c~ 514 (562)
T 3a79_B 508 PWDCTCP 514 (562)
T ss_dssp CBCCCHH
T ss_pred CcCCCcc
Confidence 8877643
No 319
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.63 E-value=1.7e-16 Score=175.53 Aligned_cols=134 Identities=24% Similarity=0.340 Sum_probs=65.9
Q ss_pred EEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCcccccccccccccccc--ccchhhccccccceec
Q 036334 70 VYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSG--VFPASVTRMNRLTRLD 147 (654)
Q Consensus 70 v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~ 147 (654)
++.|++++|++.+.. .+..+++|++|+|++|.+++.+|..|+++++|++|+|++|++++ .+|..+..+++|++|+
T Consensus 304 L~~L~l~~n~l~~~~---~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~ 380 (520)
T 2z7x_B 304 IKNFTVSGTRMVHML---CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLD 380 (520)
T ss_dssp CSEEEEESSCCCCCC---CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEE
T ss_pred eeEEEcCCCcccccc---chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEE
Confidence 455555555543211 12445555555555555555555555555555555555555554 3344455555555555
Q ss_pred cccccccccCCC-ccccccccCccccccccccCCCCCCCCCCCCeEEccCCcccccCcccc
Q 036334 148 LSSNNFSGKIPF-DVNNLTHLTGLFLENNKFSGNLPSINPANLRDFNVSNNNLNGSIPATL 207 (654)
Q Consensus 148 l~~N~l~~~~p~-~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~ 207 (654)
|++|++++.+|. .+..+++|+.|++++|++++..|....++|+.|+|++|+|+ .+|..+
T Consensus 381 Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~L~~L~Ls~N~l~-~ip~~~ 440 (520)
T 2z7x_B 381 ISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLPPRIKVLDLHSNKIK-SIPKQV 440 (520)
T ss_dssp CCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCCTTCCEEECCSSCCC-CCCGGG
T ss_pred CCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhcccCCEEECCCCccc-ccchhh
Confidence 555555543333 24445555555555555544443332244555555555554 444443
No 320
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.63 E-value=6e-17 Score=166.95 Aligned_cols=129 Identities=19% Similarity=0.225 Sum_probs=85.0
Q ss_pred EEEeecCCCCc-cccCCccccc-------CCCCccEEEeccCCccCcCCCCC--CCccccccccccccccccccchhhcc
Q 036334 70 VYSLRLPGVGL-VGPIPPNTLG-------KLSQLRVLSLRSNRLSGEIPSDF--SNLTLLRSLYLQSNQFSGVFPASVTR 139 (654)
Q Consensus 70 v~~L~l~~~~l-~~~~~~~~l~-------~l~~L~~L~Ls~N~l~~~~p~~~--~~l~~L~~L~Ls~N~l~~~~p~~~~~ 139 (654)
++.|+|++|.+ .+.++. .+. ++++|++|+|++|.+++.+|..+ .++++|++|+|++|++++. |..+..
T Consensus 65 L~~L~L~~n~l~~~~~~~-~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~ 142 (312)
T 1wwl_A 65 IKSLSLKRLTVRAARIPS-RILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAE 142 (312)
T ss_dssp HHHCCCCEEEEEEEECBH-HHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHH
T ss_pred HhhcccccccccCCCcCH-HHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHH
Confidence 56667777766 334443 233 56777777777777777676665 6677777777777777765 666666
Q ss_pred c-----cccceeccccccccccCCCccccccccCccccccccccCCCC---C---CCCCCCCeEEccCCccc
Q 036334 140 M-----NRLTRLDLSSNNFSGKIPFDVNNLTHLTGLFLENNKFSGNLP---S---INPANLRDFNVSNNNLN 200 (654)
Q Consensus 140 l-----~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~---~---~~~~~L~~L~l~~N~l~ 200 (654)
+ ++|++|+|++|+|++..|..+..+++|+.|+|++|++.+.++ . ..+++|++|+|++|+|+
T Consensus 143 l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~ 214 (312)
T 1wwl_A 143 LQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGME 214 (312)
T ss_dssp HHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCC
T ss_pred HHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCc
Confidence 6 677777777777776666677777777777777777655321 1 25567777777777776
No 321
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.62 E-value=2.8e-16 Score=179.77 Aligned_cols=162 Identities=23% Similarity=0.253 Sum_probs=135.9
Q ss_pred CCceeeEEcCC---------CCeEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccc
Q 036334 56 CNWVGVECDAN---------RSFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQS 126 (654)
Q Consensus 56 C~w~gv~C~~~---------~~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 126 (654)
|.+.-|.|+.. ..+++.|+|++|.+.+ +++..|.++++|++|+|++|.+++..|..|+++++|++|+|++
T Consensus 4 ~~~~~~~cs~~~L~~ip~~~~~~l~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 82 (680)
T 1ziw_A 4 VSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRR-LPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQH 82 (680)
T ss_dssp CBSSEEECCSSCCSSCCSCSCTTCSEEECCSSCCCC-CCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCS
T ss_pred eECCeeECCCCCccccccccCCCCcEEECCCCCCCC-cCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCC
Confidence 45555677532 2458999999999986 5555799999999999999999998899999999999999999
Q ss_pred cccccccchhhccccccceeccccccccccCCCccccccccCccccccccccCCCCCC--CCCCCCeEEccCCcccccCc
Q 036334 127 NQFSGVFPASVTRMNRLTRLDLSSNNFSGKIPFDVNNLTHLTGLFLENNKFSGNLPSI--NPANLRDFNVSNNNLNGSIP 204 (654)
Q Consensus 127 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~g~~p 204 (654)
|++++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++.++.. .+++|++|+|++|.+++..|
T Consensus 83 n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 162 (680)
T 1ziw_A 83 NELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKS 162 (680)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCH
T ss_pred CccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCH
Confidence 9999766667999999999999999999777788999999999999999999887765 88999999999999997777
Q ss_pred cccc-----CCCCccccCC
Q 036334 205 ATLS-----KFPQSSFTGN 218 (654)
Q Consensus 205 ~~~~-----~~~~l~~~~n 218 (654)
..+. ++..|.+.+|
T Consensus 163 ~~~~~~~~~~L~~L~L~~n 181 (680)
T 1ziw_A 163 EELDIFANSSLKKLELSSN 181 (680)
T ss_dssp HHHGGGTTCEESEEECTTC
T ss_pred HHhhccccccccEEECCCC
Confidence 6543 4455555555
No 322
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.62 E-value=1.7e-16 Score=173.78 Aligned_cols=150 Identities=19% Similarity=0.124 Sum_probs=122.9
Q ss_pred CeEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccccccccchhhc-ccccccee
Q 036334 68 SFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVT-RMNRLTRL 146 (654)
Q Consensus 68 ~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L 146 (654)
..++.|+|++|.+.+..+ ..+++|+.|+|++|.|++..|..|+++++|++|+|++|+|++.+|..+. .+++|+.|
T Consensus 99 ~~L~~L~L~~N~l~~~~~----~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L 174 (487)
T 3oja_A 99 PSIETLHAANNNISRVSC----SRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHL 174 (487)
T ss_dssp TTCCEEECCSSCCCCEEE----CCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEE
T ss_pred CCcCEEECcCCcCCCCCc----cccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEE
Confidence 447888888888876543 2468899999999999988888899999999999999999988888886 78999999
Q ss_pred ccccccccccCCCccccccccCccccccccccCCCCCC-CCCCCCeEEccCCcccccCcccccCCC---CccccCCCCCC
Q 036334 147 DLSSNNFSGKIPFDVNNLTHLTGLFLENNKFSGNLPSI-NPANLRDFNVSNNNLNGSIPATLSKFP---QSSFTGNLDLC 222 (654)
Q Consensus 147 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~L~~L~l~~N~l~g~~p~~~~~~~---~l~~~~n~~~c 222 (654)
+|++|.|++..+ +..+++|+.|+|++|+|++.++.+ .+++|+.|+|++|.|++ +|..+..++ .+.+.+|+..|
T Consensus 175 ~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c 251 (487)
T 3oja_A 175 NLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHC 251 (487)
T ss_dssp ECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCH
T ss_pred ecCCCccccccc--cccCCCCCEEECCCCCCCCCCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcC
Confidence 999999996633 446889999999999999887776 78899999999999984 777766554 45677888877
Q ss_pred CC
Q 036334 223 GG 224 (654)
Q Consensus 223 ~~ 224 (654)
+.
T Consensus 252 ~~ 253 (487)
T 3oja_A 252 GT 253 (487)
T ss_dssp HH
T ss_pred cc
Confidence 53
No 323
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.62 E-value=1e-16 Score=165.18 Aligned_cols=135 Identities=21% Similarity=0.251 Sum_probs=85.5
Q ss_pred eEEEeecCCCCccccCCcccc-cCCCCccEEEeccCCccCcCCCCCCCc-----cccccccccccccccccchhhccccc
Q 036334 69 FVYSLRLPGVGLVGPIPPNTL-GKLSQLRVLSLRSNRLSGEIPSDFSNL-----TLLRSLYLQSNQFSGVFPASVTRMNR 142 (654)
Q Consensus 69 ~v~~L~l~~~~l~~~~~~~~l-~~l~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~p~~~~~l~~ 142 (654)
+++.|+|++|.+.+.+|...+ ..+++|++|+|++|.|++. |..|+++ ++|++|+|++|++++..|..|+++++
T Consensus 96 ~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~ 174 (312)
T 1wwl_A 96 GLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPA 174 (312)
T ss_dssp CCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSS
T ss_pred CccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCC
Confidence 467777777777766666422 6677777777777777755 6666665 67777777777777666667777777
Q ss_pred cceecccccccccc--CCCcc--ccccccCccccccccccCCC--C-CC--CCCCCCeEEccCCcccccCc
Q 036334 143 LTRLDLSSNNFSGK--IPFDV--NNLTHLTGLFLENNKFSGNL--P-SI--NPANLRDFNVSNNNLNGSIP 204 (654)
Q Consensus 143 L~~L~l~~N~l~~~--~p~~~--~~l~~L~~L~l~~N~l~~~~--~-~~--~~~~L~~L~l~~N~l~g~~p 204 (654)
|++|+|++|++.+. +|..+ ..+++|+.|+|++|+|++.. + .. .+++|+.|+|++|++++.+|
T Consensus 175 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 245 (312)
T 1wwl_A 175 LSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAG 245 (312)
T ss_dssp CCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCC
T ss_pred CCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccc
Confidence 77777777776554 22223 56666666666666666321 1 11 45666666666666665554
No 324
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.62 E-value=1.4e-15 Score=157.96 Aligned_cols=157 Identities=20% Similarity=0.315 Sum_probs=104.2
Q ss_pred CCCCCceeeEEcCC---------CCeEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCcccccccc
Q 036334 53 DSACNWVGVECDAN---------RSFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLY 123 (654)
Q Consensus 53 ~~~C~w~gv~C~~~---------~~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 123 (654)
...|.|..+.|+.. ...++.|+|++|.+.+ +++..|.++++|++|+|++|.+++..|..|.++++|++|+
T Consensus 28 ~c~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (330)
T 1xku_A 28 RCQCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITE-IKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLY 106 (330)
T ss_dssp TCEEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCC-BCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEE
T ss_pred CCcCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCE-eChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEE
Confidence 34578999999742 2358889999999986 4444699999999999999999988899999999999999
Q ss_pred ccccccccccchh----------------------hccccccceecccccccc--ccCCCccccccccCccccccccccC
Q 036334 124 LQSNQFSGVFPAS----------------------VTRMNRLTRLDLSSNNFS--GKIPFDVNNLTHLTGLFLENNKFSG 179 (654)
Q Consensus 124 Ls~N~l~~~~p~~----------------------~~~l~~L~~L~l~~N~l~--~~~p~~~~~l~~L~~L~l~~N~l~~ 179 (654)
|++|+++ .+|.. +.++++|+.|+|++|.++ +..+..+..+++|+.|++++|+++.
T Consensus 107 Ls~n~l~-~l~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~ 185 (330)
T 1xku_A 107 LSKNQLK-ELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT 185 (330)
T ss_dssp CCSSCCS-BCCSSCCTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS
T ss_pred CCCCcCC-ccChhhcccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc
Confidence 9999887 44544 344444444444444443 2334445555555555555555553
Q ss_pred CCCCCCCCCCCeEEccCCcccccCcccccCCCC
Q 036334 180 NLPSINPANLRDFNVSNNNLNGSIPATLSKFPQ 212 (654)
Q Consensus 180 ~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~~~~ 212 (654)
.+ ....++|+.|+|++|++++..|..|.++++
T Consensus 186 l~-~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~ 217 (330)
T 1xku_A 186 IP-QGLPPSLTELHLDGNKITKVDAASLKGLNN 217 (330)
T ss_dssp CC-SSCCTTCSEEECTTSCCCEECTGGGTTCTT
T ss_pred CC-ccccccCCEEECCCCcCCccCHHHhcCCCC
Confidence 22 222255566666666665555555554443
No 325
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.62 E-value=7.3e-16 Score=160.25 Aligned_cols=158 Identities=21% Similarity=0.308 Sum_probs=117.6
Q ss_pred CCCceeeEEcCCC---------CeEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCcccccccccc
Q 036334 55 ACNWVGVECDANR---------SFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQ 125 (654)
Q Consensus 55 ~C~w~gv~C~~~~---------~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 125 (654)
.|.|..+.|+... .+++.|+|++|.+.+ ++++.|.++++|++|+|++|.+++..|..|.++++|++|+|+
T Consensus 32 ~c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 32 HCHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISE-LRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp EEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCE-ECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCc-cCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 3788888886432 357888999988875 444468889999999999999987778888889999999999
Q ss_pred ccccccccchhhccccccceeccccccccccCCCccccccccCccccccccccC--CCCCC--CCCCCCeEEccCCcccc
Q 036334 126 SNQFSGVFPASVTRMNRLTRLDLSSNNFSGKIPFDVNNLTHLTGLFLENNKFSG--NLPSI--NPANLRDFNVSNNNLNG 201 (654)
Q Consensus 126 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~--~~~~~--~~~~L~~L~l~~N~l~g 201 (654)
+|+++ .+|..+. ++|++|+|++|+|++..+..+..+++|+.|++++|.++. ..+.. .+ +|+.|++++|++++
T Consensus 111 ~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~ 186 (332)
T 2ft3_A 111 KNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG 186 (332)
T ss_dssp SSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS
T ss_pred CCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc
Confidence 99888 5666555 788888888888886655567888888888888888863 44433 33 77788888888774
Q ss_pred cCcccc-cCCCCccccCC
Q 036334 202 SIPATL-SKFPQSSFTGN 218 (654)
Q Consensus 202 ~~p~~~-~~~~~l~~~~n 218 (654)
+|..+ .++..|.+.+|
T Consensus 187 -l~~~~~~~L~~L~l~~n 203 (332)
T 2ft3_A 187 -IPKDLPETLNELHLDHN 203 (332)
T ss_dssp -CCSSSCSSCSCCBCCSS
T ss_pred -cCccccCCCCEEECCCC
Confidence 55443 35555555554
No 326
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.62 E-value=2.7e-16 Score=174.12 Aligned_cols=151 Identities=26% Similarity=0.355 Sum_probs=122.5
Q ss_pred CCccCCCCCC-----Cceee-EEcCCCCeEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCccccc
Q 036334 47 VQWNASDSAC-----NWVGV-ECDANRSFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLR 120 (654)
Q Consensus 47 ~~W~~~~~~C-----~w~gv-~C~~~~~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 120 (654)
.+|..+.++| .|.|+ .|..+. ++.|+|++|++.+ +|+. + +++|++|+|++|.|+ .+| ..+++|+
T Consensus 34 ~~W~~~~~~~~~~~~~~~~l~~C~~~~--L~~L~Ls~n~L~~-lp~~-l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~ 103 (571)
T 3cvr_A 34 DKWEKQALPGENRNEAVSLLKECLINQ--FSELQLNRLNLSS-LPDN-L--PPQITVLEITQNALI-SLP---ELPASLE 103 (571)
T ss_dssp HHHHTTCCTTCCHHHHHHHHHHHHHTT--CSEEECCSSCCSC-CCSC-C--CTTCSEEECCSSCCS-CCC---CCCTTCC
T ss_pred HHHhccCCccccccchhhhccccccCC--ccEEEeCCCCCCc-cCHh-H--cCCCCEEECcCCCCc-ccc---cccCCCC
Confidence 3576666788 69999 787544 9999999999987 8764 4 378999999999999 677 4578999
Q ss_pred cccccccccccccchhhccccccceeccccccccccCCCccccccccCccccccccccCCCCCCCCCCCCeEEccCCccc
Q 036334 121 SLYLQSNQFSGVFPASVTRMNRLTRLDLSSNNFSGKIPFDVNNLTHLTGLFLENNKFSGNLPSINPANLRDFNVSNNNLN 200 (654)
Q Consensus 121 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~ 200 (654)
+|+|++|+|++ +|. +.+ +|+.|+|++|+|++ +|. .+++|+.|+|++|+|++.++ .+++|+.|+|++|+|+
T Consensus 104 ~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~lp~--~l~~L~~L~Ls~N~L~ 173 (571)
T 3cvr_A 104 YLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTMLPE--LPTSLEVLSVRNNQLT 173 (571)
T ss_dssp EEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSCCCC--CCTTCCEEECCSSCCS
T ss_pred EEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCcCCC--cCCCcCEEECCCCCCC
Confidence 99999999997 777 665 99999999999996 776 67899999999999998444 6789999999999998
Q ss_pred ccCccccc-CCCCccccCCC
Q 036334 201 GSIPATLS-KFPQSSFTGNL 219 (654)
Q Consensus 201 g~~p~~~~-~~~~l~~~~n~ 219 (654)
+ +|. |. ++..|.+.+|.
T Consensus 174 ~-lp~-l~~~L~~L~Ls~N~ 191 (571)
T 3cvr_A 174 F-LPE-LPESLEALDVSTNL 191 (571)
T ss_dssp C-CCC-CCTTCCEEECCSSC
T ss_pred C-cch-hhCCCCEEECcCCC
Confidence 6 777 54 45555555553
No 327
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.61 E-value=6.2e-16 Score=172.95 Aligned_cols=156 Identities=21% Similarity=0.238 Sum_probs=125.1
Q ss_pred CeEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCC-CCCCCccccccccccccccccccchhhcccccccee
Q 036334 68 SFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIP-SDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRL 146 (654)
Q Consensus 68 ~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 146 (654)
.+++.|+|++|.+.+ +++. +..+++|++|+|++|.+.+..| ..|.++++|++|+|++|++++.+|..+.++++|+.|
T Consensus 373 ~~L~~L~l~~n~l~~-~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 450 (570)
T 2z63_A 373 TSLKYLDLSFNGVIT-MSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVL 450 (570)
T ss_dssp SCCCEEECCSCSEEE-EEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEE
T ss_pred CccCEEECCCCcccc-cccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEE
Confidence 346677777777764 3333 7888888888888888887666 468888999999999999988888888889999999
Q ss_pred cccccccc-ccCCCccccccccCccccccccccCCCCCC--CCCCCCeEEccCCcccccCcccccCCCC---ccccCCCC
Q 036334 147 DLSSNNFS-GKIPFDVNNLTHLTGLFLENNKFSGNLPSI--NPANLRDFNVSNNNLNGSIPATLSKFPQ---SSFTGNLD 220 (654)
Q Consensus 147 ~l~~N~l~-~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~g~~p~~~~~~~~---l~~~~n~~ 220 (654)
+|++|.++ +.+|..+..+++|+.|+|++|++++..|.. .+++|+.|+|++|++++..|..|.+++. +.+.+|+.
T Consensus 451 ~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~ 530 (570)
T 2z63_A 451 KMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPW 530 (570)
T ss_dssp ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCB
T ss_pred ECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcc
Confidence 99999987 678888889999999999999998887654 7889999999999998777776765554 45678887
Q ss_pred CCCCC
Q 036334 221 LCGGP 225 (654)
Q Consensus 221 ~c~~~ 225 (654)
.|.++
T Consensus 531 ~~~~~ 535 (570)
T 2z63_A 531 DCSCP 535 (570)
T ss_dssp CCCTT
T ss_pred cCCCc
Confidence 77654
No 328
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.61 E-value=2.1e-16 Score=182.96 Aligned_cols=148 Identities=20% Similarity=0.290 Sum_probs=132.8
Q ss_pred CeEEEeecCCCCccc-----------------cCCccccc--CCCCccEEEeccCCccCcCCCCCCCccccccccccccc
Q 036334 68 SFVYSLRLPGVGLVG-----------------PIPPNTLG--KLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQ 128 (654)
Q Consensus 68 ~~v~~L~l~~~~l~~-----------------~~~~~~l~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 128 (654)
.+++.|+|++|.++| .+|+ .++ ++++|++|+|++|.+.+.+|..|++|++|+.|+|++|+
T Consensus 448 ~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~-~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~ 526 (876)
T 4ecn_A 448 TKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENE-ELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNR 526 (876)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTS-CCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCT
T ss_pred CCCCEEECcCCcCCCCcccccccccccccccccCCh-hhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCC
Confidence 458999999999999 4887 477 99999999999999999999999999999999999998
Q ss_pred -ccc-ccchhhcccc-------ccceeccccccccccCCC--ccccccccCccccccccccCCCCCC-CCCCCCeEEccC
Q 036334 129 -FSG-VFPASVTRMN-------RLTRLDLSSNNFSGKIPF--DVNNLTHLTGLFLENNKFSGNLPSI-NPANLRDFNVSN 196 (654)
Q Consensus 129 -l~~-~~p~~~~~l~-------~L~~L~l~~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~L~~L~l~~ 196 (654)
++| .+|..+++++ +|+.|+|++|+|+ .+|. .+.++++|+.|+|++|+|+ .+|.+ .+++|+.|+|++
T Consensus 527 ~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp~~~~L~~L~~L~Ls~ 604 (876)
T 4ecn_A 527 GISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLEAFGTNVKLTDLKLDY 604 (876)
T ss_dssp TSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCCCCCTTSEESEEECCS
T ss_pred CcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cchhhcCCCcceEEECcC
Confidence 999 8999888877 9999999999999 8998 8999999999999999999 66655 889999999999
Q ss_pred CcccccCcccccCCCC-c---cccCCC
Q 036334 197 NNLNGSIPATLSKFPQ-S---SFTGNL 219 (654)
Q Consensus 197 N~l~g~~p~~~~~~~~-l---~~~~n~ 219 (654)
|+++ .+|..+.++++ | .+.+|.
T Consensus 605 N~l~-~lp~~l~~l~~~L~~L~Ls~N~ 630 (876)
T 4ecn_A 605 NQIE-EIPEDFCAFTDQVEGLGFSHNK 630 (876)
T ss_dssp SCCS-CCCTTSCEECTTCCEEECCSSC
T ss_pred Cccc-cchHHHhhccccCCEEECcCCC
Confidence 9999 99988876655 4 455554
No 329
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.61 E-value=6.3e-16 Score=169.10 Aligned_cols=146 Identities=20% Similarity=0.192 Sum_probs=131.7
Q ss_pred CeEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccccccccchhhccccccceec
Q 036334 68 SFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLD 147 (654)
Q Consensus 68 ~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 147 (654)
.+++.|+|++|.+.+..+. .|.++++|++|+|++|.|++..+..|.++++|++|+|++|++++..|..|.++++|+.|+
T Consensus 56 ~~L~~L~L~~n~i~~~~~~-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 134 (477)
T 2id5_A 56 PHLEELELNENIVSAVEPG-AFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLE 134 (477)
T ss_dssp TTCCEEECTTSCCCEECTT-TTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccCEeChh-hhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEE
Confidence 4599999999999875554 799999999999999999976667799999999999999999999999999999999999
Q ss_pred cccccccccCCCccccccccCccccccccccCCCCCC--CCCCCCeEEccCCcccccCcccccCCCCcc
Q 036334 148 LSSNNFSGKIPFDVNNLTHLTGLFLENNKFSGNLPSI--NPANLRDFNVSNNNLNGSIPATLSKFPQSS 214 (654)
Q Consensus 148 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~g~~p~~~~~~~~l~ 214 (654)
|++|.+++..|..|..+++|+.|+|++|++++.++.. .+++|+.|+|++|.+++..+..|.++++|.
T Consensus 135 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~ 203 (477)
T 2id5_A 135 VGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLK 203 (477)
T ss_dssp ECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCC
T ss_pred CCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccc
Confidence 9999999888999999999999999999999877653 889999999999999987777777766554
No 330
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.61 E-value=7.2e-16 Score=147.59 Aligned_cols=129 Identities=16% Similarity=0.228 Sum_probs=112.5
Q ss_pred CeEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccccccccchhhccccccceec
Q 036334 68 SFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLD 147 (654)
Q Consensus 68 ~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 147 (654)
.+++.|+|++|.+.. .+ .+..+++|++|+|++|.+++..+..|.++++|++|+|++|++++..|..+..+++|++|+
T Consensus 66 ~~L~~L~l~~n~~~~--~~-~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~ 142 (197)
T 4ezg_A 66 HNIKDLTINNIHATN--YN-PISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSID 142 (197)
T ss_dssp TTCSEEEEESCCCSC--CG-GGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEE
T ss_pred CCCCEEEccCCCCCc--ch-hhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEE
Confidence 358999999996643 23 589999999999999999988899999999999999999999998999999999999999
Q ss_pred ccccc-ccccCCCccccccccCccccccccccCCCCCCCCCCCCeEEccCCcccc
Q 036334 148 LSSNN-FSGKIPFDVNNLTHLTGLFLENNKFSGNLPSINPANLRDFNVSNNNLNG 201 (654)
Q Consensus 148 l~~N~-l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~g 201 (654)
|++|. ++ .+| .+..+++|+.|++++|+|++..+-..+++|+.|++++|++.+
T Consensus 143 L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~~~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 143 LSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHDYRGIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp CCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCCCTTGGGCSSCCEEEECBC----
T ss_pred ccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcChHHhccCCCCCEEEeeCcccCC
Confidence 99998 65 666 799999999999999999986644489999999999999864
No 331
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.61 E-value=1.9e-15 Score=158.97 Aligned_cols=142 Identities=27% Similarity=0.309 Sum_probs=122.9
Q ss_pred CCCCceeeEEcCCCCeEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCC-Cccccccccccccccccc
Q 036334 54 SACNWVGVECDANRSFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFS-NLTLLRSLYLQSNQFSGV 132 (654)
Q Consensus 54 ~~C~w~gv~C~~~~~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~ 132 (654)
..|. .++.|... .+++++++|.. +|.. +. ..|+.|+|++|.|++..+..|. ++++|++|+|++|+|++.
T Consensus 10 ~~Cp-~~C~C~~~-----~l~c~~~~l~~-iP~~-~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i 79 (361)
T 2xot_A 10 VSCP-ANCLCASN-----ILSCSKQQLPN-VPQS-LP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFI 79 (361)
T ss_dssp TTCC-TTCEEETT-----EEECCSSCCSS-CCSS-CC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEE
T ss_pred CCCC-CCCEECCC-----EEEeCCCCcCc-cCcc-CC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCcc
Confidence 4576 57899742 57899999874 6653 33 4689999999999987787787 999999999999999988
Q ss_pred cchhhccccccceeccccccccccCCCccccccccCccccccccccCCCCCC--CCCCCCeEEccCCcccccCccc
Q 036334 133 FPASVTRMNRLTRLDLSSNNFSGKIPFDVNNLTHLTGLFLENNKFSGNLPSI--NPANLRDFNVSNNNLNGSIPAT 206 (654)
Q Consensus 133 ~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~g~~p~~ 206 (654)
.+..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..+.. .+++|+.|+|++|+|++ +|..
T Consensus 80 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~-l~~~ 154 (361)
T 2xot_A 80 SSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISR-FPVE 154 (361)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCS-CCGG
T ss_pred ChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCe-eCHH
Confidence 8889999999999999999999877778999999999999999999887765 88999999999999994 5543
No 332
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.60 E-value=1.2e-15 Score=171.66 Aligned_cols=111 Identities=23% Similarity=0.211 Sum_probs=93.7
Q ss_pred eEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccccccccchhhccccccceecc
Q 036334 69 FVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLDL 148 (654)
Q Consensus 69 ~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 148 (654)
+++.|+|++|.+.+..+ ..|+.+++|++|+|++|.|++..|..|+++++|++|+|++|+|++..+..|+++++|++|+|
T Consensus 76 ~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 154 (597)
T 3oja_B 76 QVELLNLNDLQIEEIDT-YAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 154 (597)
T ss_dssp CCSEEECTTSCCCEECT-TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCcEEECCCCCCCCCCh-HHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEe
Confidence 48889999998876544 46889999999999999999888878889999999999999998666666788999999999
Q ss_pred ccccccccCCCccccccccCccccccccccCC
Q 036334 149 SSNNFSGKIPFDVNNLTHLTGLFLENNKFSGN 180 (654)
Q Consensus 149 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 180 (654)
++|.|++..|..|..+++|+.|+|++|+|++.
T Consensus 155 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 186 (597)
T 3oja_B 155 SNNNLERIEDDTFQATTSLQNLQLSSNRLTHV 186 (597)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC
T ss_pred eCCcCCCCChhhhhcCCcCcEEECcCCCCCCc
Confidence 99999888888888888898888888888754
No 333
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.60 E-value=5.3e-16 Score=169.87 Aligned_cols=141 Identities=21% Similarity=0.158 Sum_probs=94.4
Q ss_pred eEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCC----------------CCCCccccccccccccccccc
Q 036334 69 FVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPS----------------DFSNLTLLRSLYLQSNQFSGV 132 (654)
Q Consensus 69 ~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~----------------~~~~l~~L~~L~Ls~N~l~~~ 132 (654)
+++.|+|++|.+.+..+ |+.+++|++|+|++|.|++..+. ....+++|+.|+|++|++++.
T Consensus 59 ~L~~L~Ls~N~l~~~~~---l~~l~~L~~L~Ls~N~l~~l~~~~~L~~L~L~~N~l~~~~~~~l~~L~~L~L~~N~l~~~ 135 (487)
T 3oja_A 59 KLELLNLSSNVLYETLD---LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNISRVSCSRGQGKKNIYLANNKITML 135 (487)
T ss_dssp TCCEEECTTSCCEEEEE---CTTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCCCCEEECCCSSCEEEECCSSCCCSG
T ss_pred CCCEEEeeCCCCCCCcc---cccCCCCCEEEecCCcCCCCCCCCCcCEEECcCCcCCCCCccccCCCCEEECCCCCCCCC
Confidence 35666666666655432 55555555555555555432211 001234566666677777776
Q ss_pred cchhhccccccceeccccccccccCCCccc-cccccCccccccccccCCCCCCCCCCCCeEEccCCcccccCcccccCCC
Q 036334 133 FPASVTRMNRLTRLDLSSNNFSGKIPFDVN-NLTHLTGLFLENNKFSGNLPSINPANLRDFNVSNNNLNGSIPATLSKFP 211 (654)
Q Consensus 133 ~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~~~ 211 (654)
.|..++.+++|+.|+|++|.|++.+|..+. .+++|+.|+|++|.|++.++...+++|+.|+|++|.|++. |..+..++
T Consensus 136 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~ 214 (487)
T 3oja_A 136 RDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQVVFAKLKTLDLSSNKLAFM-GPEFQSAA 214 (487)
T ss_dssp GGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECCCCCTTCCEEECCSSCCCEE-CGGGGGGT
T ss_pred CchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccccccccCCCCCEEECCCCCCCCC-CHhHcCCC
Confidence 777788888888888888888887777775 7888888888888888876666788888888888888854 44465555
Q ss_pred Cc
Q 036334 212 QS 213 (654)
Q Consensus 212 ~l 213 (654)
.|
T Consensus 215 ~L 216 (487)
T 3oja_A 215 GV 216 (487)
T ss_dssp TC
T ss_pred Cc
Confidence 44
No 334
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.59 E-value=7e-16 Score=152.43 Aligned_cols=144 Identities=17% Similarity=0.187 Sum_probs=121.3
Q ss_pred CeEEEeecCCCCccccCCcccccCCCCccEEEecc-CCccCcCCCCCCCccccccccccccccccccchhhccccccc--
Q 036334 68 SFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRS-NRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLT-- 144 (654)
Q Consensus 68 ~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~-- 144 (654)
.+++.|+|++|.....+++..|.++++|++|+|++ |.|++..+..|.++++|++|+|++|++++ +|. +..+++|+
T Consensus 55 ~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L 132 (239)
T 2xwt_C 55 PNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIF 132 (239)
T ss_dssp TTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSE
T ss_pred CCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccc
Confidence 45899999999833467766799999999999999 99997777789999999999999999996 676 88888888
Q ss_pred -eeccccc-cccccCCCccccccccC-ccccccccccCCCCCC-CCCCCCeEEccCCc-ccccCcccccCC-CCc
Q 036334 145 -RLDLSSN-NFSGKIPFDVNNLTHLT-GLFLENNKFSGNLPSI-NPANLRDFNVSNNN-LNGSIPATLSKF-PQS 213 (654)
Q Consensus 145 -~L~l~~N-~l~~~~p~~~~~l~~L~-~L~l~~N~l~~~~~~~-~~~~L~~L~l~~N~-l~g~~p~~~~~~-~~l 213 (654)
+|++++| ++++..+..|..+++|+ .|++++|+|+...+.. ..++|+.|+|++|+ +++..+..|..+ ++|
T Consensus 133 ~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L 207 (239)
T 2xwt_C 133 FILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGP 207 (239)
T ss_dssp EEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCC
T ss_pred cEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCC
Confidence 9999999 99977777799999999 9999999999555543 44799999999995 985556667666 544
No 335
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.59 E-value=2.4e-15 Score=143.43 Aligned_cols=126 Identities=23% Similarity=0.353 Sum_probs=109.9
Q ss_pred cEEEeccCCccCcCCCCCCCccccccccccccccccccchhhccccccceeccccccccccCCCccccccccCccccccc
Q 036334 96 RVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLDLSSNNFSGKIPFDVNNLTHLTGLFLENN 175 (654)
Q Consensus 96 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N 175 (654)
+++++++|.|+ .+|..+. ++|++|+|++|+|+ .+|..|.++++|+.|+|++|+|++..+..|.++++|+.|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 57999999999 7787664 68999999999999 78899999999999999999999888888999999999999999
Q ss_pred cccCCCCCC--CCCCCCeEEccCCcccccCcccccCC---CCccccCCCCCCCCC
Q 036334 176 KFSGNLPSI--NPANLRDFNVSNNNLNGSIPATLSKF---PQSSFTGNLDLCGGP 225 (654)
Q Consensus 176 ~l~~~~~~~--~~~~L~~L~l~~N~l~g~~p~~~~~~---~~l~~~~n~~~c~~~ 225 (654)
+|++.++.. .+++|+.|+|++|+|++..+..|..+ ..+.+.+|+..|++.
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~ 143 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCN 143 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCc
Confidence 999998864 88999999999999995555556655 456678999888644
No 336
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.59 E-value=5.7e-16 Score=159.45 Aligned_cols=141 Identities=19% Similarity=0.223 Sum_probs=103.2
Q ss_pred EEEeecCCCCccccCCcccc-cCCCCccEEEeccCCccCcCC----CCCCCccccccccccccccccccchhhccccccc
Q 036334 70 VYSLRLPGVGLVGPIPPNTL-GKLSQLRVLSLRSNRLSGEIP----SDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLT 144 (654)
Q Consensus 70 v~~L~l~~~~l~~~~~~~~l-~~l~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 144 (654)
++.|+|++|.+.+.+|...+ ..+++|++|+|++|.+++..+ ..+..+++|++|+|++|++++..|..|..+++|+
T Consensus 93 L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 172 (310)
T 4glp_A 93 LKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALT 172 (310)
T ss_dssp CCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCC
T ss_pred eeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCC
Confidence 77888888888887776422 788888888888888886555 3345678888888888888877778888888888
Q ss_pred eecccccccccc--C--CCccccccccCccccccccccCCCCC---C--CCCCCCeEEccCCcccccCcccccCC
Q 036334 145 RLDLSSNNFSGK--I--PFDVNNLTHLTGLFLENNKFSGNLPS---I--NPANLRDFNVSNNNLNGSIPATLSKF 210 (654)
Q Consensus 145 ~L~l~~N~l~~~--~--p~~~~~l~~L~~L~l~~N~l~~~~~~---~--~~~~L~~L~l~~N~l~g~~p~~~~~~ 210 (654)
+|+|++|++.+. + +..+..+++|++|+|++|+|+..... . .+++|++|+|++|+|++.+|..+..+
T Consensus 173 ~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~ 247 (310)
T 4glp_A 173 SLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRC 247 (310)
T ss_dssp EEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSC
T ss_pred EEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhc
Confidence 888888887642 2 22346778888888888888643332 1 56788888888888887777665544
No 337
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.59 E-value=3.8e-15 Score=154.69 Aligned_cols=140 Identities=22% Similarity=0.318 Sum_probs=104.7
Q ss_pred eEEEeecCCCCccccCCcccccCCCCccEEEeccCCcc--CcCCCCCCCccccccccccccccccccchhhcccccccee
Q 036334 69 FVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLS--GEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRL 146 (654)
Q Consensus 69 ~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 146 (654)
.++.|+|++|.+.+ +++..|.++++|++|+|++|.++ +..+..|.++++|++|+|++|+++ .+|..+. ++|++|
T Consensus 122 ~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~--~~L~~L 197 (330)
T 1xku_A 122 TLQELRVHENEITK-VRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP--PSLTEL 197 (330)
T ss_dssp TCCEEECCSSCCCB-BCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC--TTCSEE
T ss_pred cccEEECCCCcccc-cCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCcccc--ccCCEE
Confidence 47888888888875 44446888888888888888885 366777888888888888888887 4555443 677888
Q ss_pred ccccccccccCCCccccccccCccccccccccCCCCCC--CCCCCCeEEccCCcccccCcccccCCCCc
Q 036334 147 DLSSNNFSGKIPFDVNNLTHLTGLFLENNKFSGNLPSI--NPANLRDFNVSNNNLNGSIPATLSKFPQS 213 (654)
Q Consensus 147 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~g~~p~~~~~~~~l 213 (654)
+|++|++++..|..+..+++|+.|+|++|+|++..+.. .+++|+.|+|++|+++ .+|..+..++.|
T Consensus 198 ~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L 265 (330)
T 1xku_A 198 HLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYI 265 (330)
T ss_dssp ECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSC
T ss_pred ECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCc
Confidence 88888887777777777788888888888887766643 6777888888888877 777766655544
No 338
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.58 E-value=4.8e-16 Score=141.63 Aligned_cols=123 Identities=22% Similarity=0.328 Sum_probs=108.6
Q ss_pred CCCCccEEEeccCCcc-CcCCCCCCCccccccccccccccccccchhhccccccceeccccccccccCCCccccccccCc
Q 036334 91 KLSQLRVLSLRSNRLS-GEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLDLSSNNFSGKIPFDVNNLTHLTG 169 (654)
Q Consensus 91 ~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~ 169 (654)
..++|+.|+|++|.++ +.+|..+..+++|++|+|++|++++. ..+..+++|++|+|++|+|++.+|..+..+++|+.
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 92 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTH 92 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCE
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCE
Confidence 4578999999999999 88999999999999999999999976 78999999999999999999878888888999999
Q ss_pred cccccccccCCC--CCC-CCCCCCeEEccCCcccccCc---ccccCCCCccc
Q 036334 170 LFLENNKFSGNL--PSI-NPANLRDFNVSNNNLNGSIP---ATLSKFPQSSF 215 (654)
Q Consensus 170 L~l~~N~l~~~~--~~~-~~~~L~~L~l~~N~l~g~~p---~~~~~~~~l~~ 215 (654)
|++++|+|++.. ... .+++|+.|++++|++++..+ ..+..+++|..
T Consensus 93 L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~ 144 (149)
T 2je0_A 93 LNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTY 144 (149)
T ss_dssp EECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCE
T ss_pred EECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCccc
Confidence 999999999853 334 88999999999999996655 46777776654
No 339
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.58 E-value=1.3e-15 Score=141.86 Aligned_cols=125 Identities=21% Similarity=0.296 Sum_probs=109.1
Q ss_pred cCCCCccEEEeccCCcc-CcCCCCCCCccccccccccccccccccchhhccccccceeccccccccccCCCccccccccC
Q 036334 90 GKLSQLRVLSLRSNRLS-GEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLDLSSNNFSGKIPFDVNNLTHLT 168 (654)
Q Consensus 90 ~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~ 168 (654)
...++|++|+|++|.++ +.+|..+..+++|+.|+|++|++++. ..+..+++|++|+|++|+|++.+|..+..+++|+
T Consensus 21 ~~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 98 (168)
T 2ell_A 21 RTPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLT 98 (168)
T ss_dssp SCTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCC
T ss_pred CCcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCC
Confidence 34578999999999998 88999999999999999999999976 7899999999999999999987888888899999
Q ss_pred ccccccccccCCC--CCC-CCCCCCeEEccCCcccccCc---ccccCCCCcccc
Q 036334 169 GLFLENNKFSGNL--PSI-NPANLRDFNVSNNNLNGSIP---ATLSKFPQSSFT 216 (654)
Q Consensus 169 ~L~l~~N~l~~~~--~~~-~~~~L~~L~l~~N~l~g~~p---~~~~~~~~l~~~ 216 (654)
.|+|++|+|++.. ... .+++|+.|+|++|++++..+ ..+..+++|...
T Consensus 99 ~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L 152 (168)
T 2ell_A 99 HLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYL 152 (168)
T ss_dssp EEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEE
T ss_pred EEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEe
Confidence 9999999999865 344 88999999999999995544 367777766543
No 340
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.58 E-value=4.5e-15 Score=154.26 Aligned_cols=144 Identities=22% Similarity=0.328 Sum_probs=101.8
Q ss_pred EEEeecCCCCccccCCcccccCCCCccEEEeccCCcc--CcCCCCCCCccccccccccccccccccchhhccccccceec
Q 036334 70 VYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLS--GEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLD 147 (654)
Q Consensus 70 v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 147 (654)
++.|+|++|.+. .+++..|.++++|++|+|++|.++ +..|..|..+ +|++|+|++|++++ +|..+. ++|+.|+
T Consensus 125 L~~L~l~~n~i~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~ 199 (332)
T 2ft3_A 125 LVELRIHDNRIR-KVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELH 199 (332)
T ss_dssp CCEEECCSSCCC-CCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCB
T ss_pred CCEEECCCCccC-ccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEE
Confidence 444555555544 233334666666666666666664 3555556665 66666666666663 444443 6888899
Q ss_pred cccccccccCCCccccccccCccccccccccCCCCCC--CCCCCCeEEccCCcccccCcccccCCCCc---cccCCC
Q 036334 148 LSSNNFSGKIPFDVNNLTHLTGLFLENNKFSGNLPSI--NPANLRDFNVSNNNLNGSIPATLSKFPQS---SFTGNL 219 (654)
Q Consensus 148 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~g~~p~~~~~~~~l---~~~~n~ 219 (654)
|++|++++..+..+..+++|+.|+|++|+|++..+.. .+++|+.|+|++|+++ .+|..+.+++.| .+.+|.
T Consensus 200 l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~ 275 (332)
T 2ft3_A 200 LDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNN 275 (332)
T ss_dssp CCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSC
T ss_pred CCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCC
Confidence 9999999888888999999999999999999887754 7889999999999998 888877766654 444554
No 341
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.58 E-value=2.1e-15 Score=168.71 Aligned_cols=138 Identities=22% Similarity=0.242 Sum_probs=129.2
Q ss_pred CeEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccccc-cccchhhcccccccee
Q 036334 68 SFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFS-GVFPASVTRMNRLTRL 146 (654)
Q Consensus 68 ~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L 146 (654)
.+++.|+|++|.+.+..+...+.++++|++|+|++|.+.+..|..|.++++|++|+|++|+++ +.+|..+..+++|+.|
T Consensus 396 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L 475 (570)
T 2z63_A 396 EQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFL 475 (570)
T ss_dssp TTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEE
T ss_pred CCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEE
Confidence 458899999999998877667999999999999999999999999999999999999999998 6899999999999999
Q ss_pred ccccccccccCCCccccccccCccccccccccCCCCCC--CCCCCCeEEccCCcccccCcc
Q 036334 147 DLSSNNFSGKIPFDVNNLTHLTGLFLENNKFSGNLPSI--NPANLRDFNVSNNNLNGSIPA 205 (654)
Q Consensus 147 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~g~~p~ 205 (654)
+|++|++++..|..+..+++|+.|+|++|+|++.++.. .+++|+.|+|++|++++.+|.
T Consensus 476 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 536 (570)
T 2z63_A 476 DLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 536 (570)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred ECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcc
Confidence 99999999988999999999999999999999988864 889999999999999998884
No 342
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.58 E-value=3.8e-15 Score=158.44 Aligned_cols=111 Identities=23% Similarity=0.240 Sum_probs=88.2
Q ss_pred eEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccccccccchhhccccccceecc
Q 036334 69 FVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLDL 148 (654)
Q Consensus 69 ~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 148 (654)
+++.|+|++|.+.+ +++..|..+++|++|+|++|.+++..|..|+++++|++|+|++|+++...+..|.++++|++|+|
T Consensus 70 ~L~~L~L~~n~i~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 148 (390)
T 3o6n_A 70 QVELLNLNDLQIEE-IDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 148 (390)
T ss_dssp CCSEEECTTSCCCE-ECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cCcEEECCCCcccc-cChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEEC
Confidence 47888888888865 44446888888888888888888777777888888888888888888554445678888888888
Q ss_pred ccccccccCCCccccccccCccccccccccCC
Q 036334 149 SSNNFSGKIPFDVNNLTHLTGLFLENNKFSGN 180 (654)
Q Consensus 149 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 180 (654)
++|++++..|..+..+++|+.|++++|++++.
T Consensus 149 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 180 (390)
T 3o6n_A 149 SNNNLERIEDDTFQATTSLQNLQLSSNRLTHV 180 (390)
T ss_dssp CSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC
T ss_pred CCCccCccChhhccCCCCCCEEECCCCcCCcc
Confidence 88888877777788888888888888887754
No 343
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.58 E-value=8.2e-16 Score=171.21 Aligned_cols=153 Identities=21% Similarity=0.187 Sum_probs=83.1
Q ss_pred EEEeecCCCCccccCCc--ccccCCCCccEEEeccCCccCcCC--CCCCCccccccccccccccccccchhhccccccce
Q 036334 70 VYSLRLPGVGLVGPIPP--NTLGKLSQLRVLSLRSNRLSGEIP--SDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTR 145 (654)
Q Consensus 70 v~~L~l~~~~l~~~~~~--~~l~~l~~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 145 (654)
++.|+|++|.+.+.+++ ..++.+++|++|+|++|.|++..+ ..+..+++|++|+|++|+++ .+|..+..+++|++
T Consensus 336 L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~ 414 (549)
T 2z81_A 336 LEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRF 414 (549)
T ss_dssp CCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCE
T ss_pred ccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccE
Confidence 55566666665554431 124555555555555555553321 23555555566666666555 45555555555555
Q ss_pred eccccccccccCCCcc------------------ccccccCccccccccccCCCCCCCCCCCCeEEccCCcccccCcccc
Q 036334 146 LDLSSNNFSGKIPFDV------------------NNLTHLTGLFLENNKFSGNLPSINPANLRDFNVSNNNLNGSIPATL 207 (654)
Q Consensus 146 L~l~~N~l~~~~p~~~------------------~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~ 207 (654)
|+|++|+|+ .+|..+ ..+++|+.|+|++|+|+..+....+++|+.|+|++|+|++..|..+
T Consensus 415 L~Ls~N~l~-~l~~~~~~~L~~L~Ls~N~l~~~~~~l~~L~~L~Ls~N~l~~ip~~~~l~~L~~L~Ls~N~l~~~~~~~~ 493 (549)
T 2z81_A 415 LNLSSTGIR-VVKTCIPQTLEVLDVSNNNLDSFSLFLPRLQELYISRNKLKTLPDASLFPVLLVMKISRNQLKSVPDGIF 493 (549)
T ss_dssp EECTTSCCS-CCCTTSCTTCSEEECCSSCCSCCCCCCTTCCEEECCSSCCSSCCCGGGCTTCCEEECCSSCCCCCCTTGG
T ss_pred EECCCCCcc-cccchhcCCceEEECCCCChhhhcccCChhcEEECCCCccCcCCCcccCccCCEEecCCCccCCcCHHHH
Confidence 555555554 222211 2456666666666666633332256677777777777776666555
Q ss_pred cCCC---CccccCCCCCCCC
Q 036334 208 SKFP---QSSFTGNLDLCGG 224 (654)
Q Consensus 208 ~~~~---~l~~~~n~~~c~~ 224 (654)
.+++ .+.+.+|+..|.+
T Consensus 494 ~~l~~L~~L~l~~N~~~~~~ 513 (549)
T 2z81_A 494 DRLTSLQKIWLHTNPWDCSC 513 (549)
T ss_dssp GGCTTCCEEECCSSCBCCCH
T ss_pred hcCcccCEEEecCCCccCCC
Confidence 5443 3455666666643
No 344
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.56 E-value=2.1e-15 Score=155.73 Aligned_cols=115 Identities=21% Similarity=0.123 Sum_probs=58.9
Q ss_pred CCCccEEEeccCCccCcCCCCCCCccccccccccccccccccchhhc-cccccceeccccccccccCCCccccccccCcc
Q 036334 92 LSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVT-RMNRLTRLDLSSNNFSGKIPFDVNNLTHLTGL 170 (654)
Q Consensus 92 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L 170 (654)
+++|++|+|++|.+++..+..|.++++|++|+|++|++++..|..+. .+++|++|+|++|+|++. +. ...+++|+.|
T Consensus 119 ~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L 196 (317)
T 3o53_A 119 GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTL 196 (317)
T ss_dssp CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEE
T ss_pred cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEE
Confidence 34455555555555544444555555555555555555554444442 455555555555555533 21 2235555555
Q ss_pred ccccccccCCCCCC-CCCCCCeEEccCCcccccCcccccC
Q 036334 171 FLENNKFSGNLPSI-NPANLRDFNVSNNNLNGSIPATLSK 209 (654)
Q Consensus 171 ~l~~N~l~~~~~~~-~~~~L~~L~l~~N~l~g~~p~~~~~ 209 (654)
+|++|+|++.++.. .+++|+.|+|++|+|+ .+|..+..
T Consensus 197 ~Ls~N~l~~l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~ 235 (317)
T 3o53_A 197 DLSSNKLAFMGPEFQSAAGVTWISLRNNKLV-LIEKALRF 235 (317)
T ss_dssp ECCSSCCCEECGGGGGGTTCSEEECTTSCCC-EECTTCCC
T ss_pred ECCCCcCCcchhhhcccCcccEEECcCCccc-chhhHhhc
Confidence 55555555544443 4455555555555555 34544433
No 345
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.56 E-value=6.4e-15 Score=150.10 Aligned_cols=134 Identities=28% Similarity=0.390 Sum_probs=98.2
Q ss_pred eEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccccccccchhhccccccceecc
Q 036334 69 FVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLDL 148 (654)
Q Consensus 69 ~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 148 (654)
+++.|+|++|.+.+. ++ +.++++|++|+|++|.+++ +| .+.++++|++|+|++|++++. ..+..+++|+.|+|
T Consensus 69 ~L~~L~L~~n~l~~~-~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l 141 (291)
T 1h6t_A 69 NVTKLFLNGNKLTDI-KP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYL 141 (291)
T ss_dssp TCCEEECCSSCCCCC-GG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEEC
T ss_pred CCCEEEccCCccCCC-cc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEc
Confidence 477888888887653 33 7788888888888888874 33 477788888888888888753 46777888888888
Q ss_pred ccccccccCCCccccccccCccccccccccCCCCCCCCCCCCeEEccCCcccccCcccccCCCCc
Q 036334 149 SSNNFSGKIPFDVNNLTHLTGLFLENNKFSGNLPSINPANLRDFNVSNNNLNGSIPATLSKFPQS 213 (654)
Q Consensus 149 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~~~~l 213 (654)
++|+|++. ..+..+++|+.|+|++|+|++..+-..+++|+.|+|++|+|++ +|. +.++++|
T Consensus 142 ~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~l~~l~~L~~L~L~~N~i~~-l~~-l~~l~~L 202 (291)
T 1h6t_A 142 GNNKITDI--TVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISD-LRA-LAGLKNL 202 (291)
T ss_dssp CSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCB-CGG-GTTCTTC
T ss_pred cCCcCCcc--hhhccCCCCCEEEccCCccccchhhcCCCccCEEECCCCcCCC-Chh-hccCCCC
Confidence 88888754 4677888888888888888877664477888888888888874 443 5554443
No 346
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.55 E-value=2.9e-16 Score=179.94 Aligned_cols=140 Identities=24% Similarity=0.324 Sum_probs=121.4
Q ss_pred CCeEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccccccccchhhcccccccee
Q 036334 67 RSFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRL 146 (654)
Q Consensus 67 ~~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 146 (654)
...++.|+|++|.+. .++++ +.++++|++|+|++|.|+ .+|..|++|++|++|+|++|+|+ .+|..|++|++|++|
T Consensus 223 l~~L~~L~Ls~n~l~-~l~~~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L 298 (727)
T 4b8c_D 223 DQLWHALDLSNLQIF-NISAN-IFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYF 298 (727)
T ss_dssp CCCCCEEECTTSCCS-CCCGG-GGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEE
T ss_pred CCCCcEEECCCCCCC-CCChh-hcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEE
Confidence 345899999999997 78874 679999999999999999 89999999999999999999999 889999999999999
Q ss_pred ccccccccccCCCccccccccCccccccccccCCCCCC--CC-CCCCeEEccCCcccccCcccccCCC
Q 036334 147 DLSSNNFSGKIPFDVNNLTHLTGLFLENNKFSGNLPSI--NP-ANLRDFNVSNNNLNGSIPATLSKFP 211 (654)
Q Consensus 147 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~-~~L~~L~l~~N~l~g~~p~~~~~~~ 211 (654)
+|++|.|+ .+|..|++|++|+.|+|++|.|++.+|.. .+ ..+..|+|++|.++|.+|..+..+.
T Consensus 299 ~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~l~~l~ 365 (727)
T 4b8c_D 299 YFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHERRFIE 365 (727)
T ss_dssp ECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-----
T ss_pred ECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccccceeE
Confidence 99999998 88989999999999999999999988865 11 1233578999999999998776554
No 347
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.55 E-value=4.4e-15 Score=164.24 Aligned_cols=148 Identities=20% Similarity=0.204 Sum_probs=96.4
Q ss_pred eEEEeecCCCCccccCCcccc-----cCCCCccEEEeccCCccCcCCC-------------------------C-CCCcc
Q 036334 69 FVYSLRLPGVGLVGPIPPNTL-----GKLSQLRVLSLRSNRLSGEIPS-------------------------D-FSNLT 117 (654)
Q Consensus 69 ~v~~L~l~~~~l~~~~~~~~l-----~~l~~L~~L~Ls~N~l~~~~p~-------------------------~-~~~l~ 117 (654)
+++.|+|++|.+.|.+|.. + +++++|+.|++++|.+ .+|. . +..++
T Consensus 248 ~L~~L~l~~n~l~~~~p~~-~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~ 324 (520)
T 2z7x_B 248 TVWYFSISNVKLQGQLDFR-DFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKIS 324 (520)
T ss_dssp SCSEEEEEEEEEESCCCCC-CCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCC
T ss_pred cccEEEeecccccCccccc-hhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCccccccchhhCC
Confidence 3666666666666666653 3 5555555555555554 2221 1 15667
Q ss_pred ccccccccccccccccchhhccccccceeccccccccc--cCCCccccccccCccccccccccCCCCC--C-CCCCCCeE
Q 036334 118 LLRSLYLQSNQFSGVFPASVTRMNRLTRLDLSSNNFSG--KIPFDVNNLTHLTGLFLENNKFSGNLPS--I-NPANLRDF 192 (654)
Q Consensus 118 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~--~~p~~~~~l~~L~~L~l~~N~l~~~~~~--~-~~~~L~~L 192 (654)
+|++|+|++|++++.+|..+..+++|++|+|++|+|++ .+|..+..+++|+.|+|++|++++.+|. . .+++|+.|
T Consensus 325 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L 404 (520)
T 2z7x_B 325 PFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSL 404 (520)
T ss_dssp CCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEE
T ss_pred cccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEE
Confidence 77777777777777777777777777777777777775 4555677777777777777777774442 2 56777777
Q ss_pred EccCCcccccCcccc-cCCCCccccCCC
Q 036334 193 NVSNNNLNGSIPATL-SKFPQSSFTGNL 219 (654)
Q Consensus 193 ~l~~N~l~g~~p~~~-~~~~~l~~~~n~ 219 (654)
+|++|++++.+|..+ .++..|.+.+|.
T Consensus 405 ~Ls~N~l~~~~~~~l~~~L~~L~Ls~N~ 432 (520)
T 2z7x_B 405 NMSSNILTDTIFRCLPPRIKVLDLHSNK 432 (520)
T ss_dssp ECCSSCCCGGGGGSCCTTCCEEECCSSC
T ss_pred ECcCCCCCcchhhhhcccCCEEECCCCc
Confidence 777777777777666 356666655553
No 348
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.54 E-value=9.5e-15 Score=163.15 Aligned_cols=124 Identities=21% Similarity=0.276 Sum_probs=102.7
Q ss_pred cCCCCccEEEeccCCccCcCCCCCCCcccccccccccccccc--ccchhhccccccceeccccccccccCCC-ccccccc
Q 036334 90 GKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSG--VFPASVTRMNRLTRLDLSSNNFSGKIPF-DVNNLTH 166 (654)
Q Consensus 90 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~l~~ 166 (654)
..+++|++|+|++|.+++.+|..|+++++|++|+|++|++++ .+|..+.++++|++|+|++|++++.+|. .+..+++
T Consensus 350 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~ 429 (562)
T 3a79_B 350 PSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAES 429 (562)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTT
T ss_pred cCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCccc
Confidence 678889999999999998888889999999999999999986 3456788899999999999999875665 4778899
Q ss_pred cCccccccccccCCCCCCCCCCCCeEEccCCcccccCcccccCCCCcc
Q 036334 167 LTGLFLENNKFSGNLPSINPANLRDFNVSNNNLNGSIPATLSKFPQSS 214 (654)
Q Consensus 167 L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~~~~l~ 214 (654)
|+.|+|++|+|++.+|....++|+.|+|++|+|+ .+|..+.+++.|.
T Consensus 430 L~~L~l~~n~l~~~~~~~l~~~L~~L~L~~N~l~-~ip~~~~~l~~L~ 476 (562)
T 3a79_B 430 ILVLNLSSNMLTGSVFRCLPPKVKVLDLHNNRIM-SIPKDVTHLQALQ 476 (562)
T ss_dssp CCEEECCSSCCCGGGGSSCCTTCSEEECCSSCCC-CCCTTTTSSCCCS
T ss_pred CCEEECCCCCCCcchhhhhcCcCCEEECCCCcCc-ccChhhcCCCCCC
Confidence 9999999999988776654478999999999998 7887766666543
No 349
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.54 E-value=8.3e-15 Score=136.63 Aligned_cols=107 Identities=26% Similarity=0.371 Sum_probs=83.7
Q ss_pred EEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccccccccchhhccccccceecccc
Q 036334 71 YSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLDLSS 150 (654)
Q Consensus 71 ~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 150 (654)
+.|++++|++.. +|.. + .++|++|+|++|.|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++
T Consensus 12 ~~l~~s~n~l~~-ip~~-~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 12 TTVDCSGKSLAS-VPTG-I--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TEEECTTSCCSS-CCSC-C--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcCc-cCcc-C--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 356777777764 6653 3 37888899999999887788888888888888888888877777778888888888888
Q ss_pred ccccccCCCccccccccCccccccccccCCC
Q 036334 151 NNFSGKIPFDVNNLTHLTGLFLENNKFSGNL 181 (654)
Q Consensus 151 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 181 (654)
|+|++..+..|..+++|+.|+|++|.++...
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 8888666666778888877777777776544
No 350
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.54 E-value=2.6e-15 Score=140.91 Aligned_cols=126 Identities=21% Similarity=0.246 Sum_probs=103.7
Q ss_pred eEEEeecCCCCccccCCcccccCCC-CccEEEeccCCccCcCCCCCCCccccccccccccccccccchhhccccccceec
Q 036334 69 FVYSLRLPGVGLVGPIPPNTLGKLS-QLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLD 147 (654)
Q Consensus 69 ~v~~L~l~~~~l~~~~~~~~l~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 147 (654)
.++.|+|++|.+.. ++ .+..+. +|++|+|++|.|++. ..|.++++|++|+|++|+|++..+..+..+++|++|+
T Consensus 20 ~L~~L~l~~n~l~~-i~--~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 94 (176)
T 1a9n_A 20 RDRELDLRGYKIPV-IE--NLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELI 94 (176)
T ss_dssp SCEEEECTTSCCCS-CC--CGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEE
T ss_pred CceEEEeeCCCCch-hH--HhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEE
Confidence 48899999999874 44 255555 999999999999865 6888999999999999999976556668899999999
Q ss_pred cccccccccCCC--ccccccccCccccccccccCCCCC----C-CCCCCCeEEccCCccc
Q 036334 148 LSSNNFSGKIPF--DVNNLTHLTGLFLENNKFSGNLPS----I-NPANLRDFNVSNNNLN 200 (654)
Q Consensus 148 l~~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~~~----~-~~~~L~~L~l~~N~l~ 200 (654)
|++|+|+ .+|. .+..+++|+.|++++|.++..++. . .+++|+.|++++|.+.
T Consensus 95 L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 95 LTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 9999996 5665 788899999999999999866553 3 7889999999998876
No 351
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.54 E-value=1.1e-14 Score=136.22 Aligned_cols=118 Identities=25% Similarity=0.434 Sum_probs=92.9
Q ss_pred CCCceeeEEcCCCCeEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccccccccc
Q 036334 55 ACNWVGVECDANRSFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFP 134 (654)
Q Consensus 55 ~C~w~gv~C~~~~~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 134 (654)
.|. .+++|.. +.+++++|++. .+|.. +. ++|++|+|++|.|++..|..|.++++|++|+|++|+|++..+
T Consensus 5 ~CP-~~C~C~~-----~~l~~~~n~l~-~iP~~-~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~ 74 (174)
T 2r9u_A 5 GCP-SQCSCDQ-----TLVNCQNIRLA-SVPAG-IP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPT 74 (174)
T ss_dssp SSC-TTSEECS-----SEEECCSSCCS-SCCSC-CC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred CCC-CCCEECC-----cEEEeCCCCCC-ccCCC-cC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccCh
Confidence 455 4567743 46888888884 67763 43 789999999999998888889999999999999999997666
Q ss_pred hhhccccccceeccccccccccCCCccccccccCccccccccccCCCC
Q 036334 135 ASVTRMNRLTRLDLSSNNFSGKIPFDVNNLTHLTGLFLENNKFSGNLP 182 (654)
Q Consensus 135 ~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~ 182 (654)
..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|.|....+
T Consensus 75 ~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 75 GVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred hHhCCcchhhEEECCCCccceeCHHHhccccCCCEEEeCCCCcccccc
Confidence 667888999999999999986655568888888888888888775443
No 352
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.53 E-value=2.8e-15 Score=154.76 Aligned_cols=143 Identities=22% Similarity=0.204 Sum_probs=121.5
Q ss_pred CeEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCC-Cccccccccccccccccccchhhcccccccee
Q 036334 68 SFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFS-NLTLLRSLYLQSNQFSGVFPASVTRMNRLTRL 146 (654)
Q Consensus 68 ~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 146 (654)
..++.|+|++|.+.+..+ ..++.+++|++|+|++|.+++..+..+. ++++|++|+|++|++++. |. ...+++|++|
T Consensus 120 ~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L 196 (317)
T 3o53_A 120 QGKKNIYLANNKITMLRD-LDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTL 196 (317)
T ss_dssp SSCEEEECCSSCCCSGGG-BCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEE
T ss_pred CCCCEEECCCCCCCCccc-hhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEE
Confidence 347888899998876444 4689999999999999999988777774 799999999999999965 43 3459999999
Q ss_pred ccccccccccCCCccccccccCccccccccccCCCCCC-CCCCCCeEEccCCccc-ccCcccccCCCCcc
Q 036334 147 DLSSNNFSGKIPFDVNNLTHLTGLFLENNKFSGNLPSI-NPANLRDFNVSNNNLN-GSIPATLSKFPQSS 214 (654)
Q Consensus 147 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~L~~L~l~~N~l~-g~~p~~~~~~~~l~ 214 (654)
+|++|+|++ +|..+..+++|+.|+|++|+|++.++.. .+++|+.|+|++|+++ +.+|..+.+++.+.
T Consensus 197 ~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~ 265 (317)
T 3o53_A 197 DLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQ 265 (317)
T ss_dssp ECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHH
T ss_pred ECCCCcCCc-chhhhcccCcccEEECcCCcccchhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccce
Confidence 999999995 5556999999999999999999766555 8899999999999999 88888888776543
No 353
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.53 E-value=5.3e-17 Score=155.64 Aligned_cols=143 Identities=24% Similarity=0.326 Sum_probs=122.1
Q ss_pred eEEEeecCCCCccccCCc-----ccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccccccccchhhcccccc
Q 036334 69 FVYSLRLPGVGLVGPIPP-----NTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRL 143 (654)
Q Consensus 69 ~v~~L~l~~~~l~~~~~~-----~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 143 (654)
+|+.++|+.+.+.|.+|+ ..+..+++|++|+|++|.|++ +| .+.++++|++|+|++|+++ .+|..+..+++|
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L 95 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTL 95 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHC
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcC
Confidence 367778888888887764 248899999999999999996 77 8999999999999999999 788888889999
Q ss_pred ceeccccccccccCCCccccccccCccccccccccCCCC--CC-CCCCCCeEEccCCcccccCccc----------ccCC
Q 036334 144 TRLDLSSNNFSGKIPFDVNNLTHLTGLFLENNKFSGNLP--SI-NPANLRDFNVSNNNLNGSIPAT----------LSKF 210 (654)
Q Consensus 144 ~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~--~~-~~~~L~~L~l~~N~l~g~~p~~----------~~~~ 210 (654)
++|+|++|+|++ +| .+..+++|+.|+|++|+|++..+ .. .+++|++|+|++|++++.+|.. +.++
T Consensus 96 ~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l 173 (198)
T 1ds9_A 96 EELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRL 173 (198)
T ss_dssp SEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHC
T ss_pred CEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhC
Confidence 999999999996 56 68999999999999999997554 23 8899999999999999887753 6677
Q ss_pred CCcccc
Q 036334 211 PQSSFT 216 (654)
Q Consensus 211 ~~l~~~ 216 (654)
++|...
T Consensus 174 ~~L~~L 179 (198)
T 1ds9_A 174 PNLKKL 179 (198)
T ss_dssp SSCSEE
T ss_pred CCcEEE
Confidence 776543
No 354
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.53 E-value=1.3e-14 Score=149.15 Aligned_cols=141 Identities=24% Similarity=0.390 Sum_probs=104.2
Q ss_pred CeEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccccccccchhhccccccceec
Q 036334 68 SFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLD 147 (654)
Q Consensus 68 ~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 147 (654)
.+++.|+|++|.+.+ +++ +..+++|++|+|++|.+++ ++ .+.++++|++|+|++|++++. +. +..+++|+.|+
T Consensus 63 ~~L~~L~L~~n~i~~-~~~--~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~ 135 (308)
T 1h6u_A 63 NNLIGLELKDNQITD-LAP--LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITDV-TP-LAGLSNLQVLY 135 (308)
T ss_dssp TTCCEEECCSSCCCC-CGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCCC-GG-GTTCTTCCEEE
T ss_pred CCCCEEEccCCcCCC-Chh--HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCCc-hh-hcCCCCCCEEE
Confidence 348888888888865 333 7888888888888888885 33 688888888888888888854 43 78888888888
Q ss_pred cccccccccCCCccccccccCccccccccccCCCCCCCCCCCCeEEccCCcccccCcccccCCC---CccccCCC
Q 036334 148 LSSNNFSGKIPFDVNNLTHLTGLFLENNKFSGNLPSINPANLRDFNVSNNNLNGSIPATLSKFP---QSSFTGNL 219 (654)
Q Consensus 148 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~~~---~l~~~~n~ 219 (654)
|++|++++..+ +..+++|+.|+|++|+|++..+-..+++|+.|+|++|++++..+ +..++ .|.+.+|.
T Consensus 136 l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~ 206 (308)
T 1h6u_A 136 LDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQ 206 (308)
T ss_dssp CCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSC
T ss_pred CCCCccCcCcc--ccCCCCccEEEccCCcCCCChhhcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCc
Confidence 88888885443 77888888888888888876664477888888888888874433 44443 34444443
No 355
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.53 E-value=1.2e-14 Score=149.26 Aligned_cols=122 Identities=25% Similarity=0.426 Sum_probs=65.7
Q ss_pred EEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccccccccchhhccccccceeccc
Q 036334 70 VYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLDLS 149 (654)
Q Consensus 70 v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 149 (654)
++.|+++++++.. ++ .+..+++|++|+|++|.+++..+ +.++++|++|+|++|++++. + .+..+++|+.|+|+
T Consensus 43 L~~L~l~~~~i~~-l~--~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~l~ 115 (308)
T 1h6u_A 43 ITTLSAFGTGVTT-IE--GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV-S-AIAGLQSIKTLDLT 115 (308)
T ss_dssp CCEEECTTSCCCC-CT--TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC-G-GGTTCTTCCEEECT
T ss_pred cCEEEeeCCCccC-ch--hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc-h-hhcCCCCCCEEECC
Confidence 5555555555543 32 25555555556665555553332 55555555566655555532 2 45555555556665
Q ss_pred cccccccCCCccccccccCccccccccccCCCCCCCCCCCCeEEccCCccc
Q 036334 150 SNNFSGKIPFDVNNLTHLTGLFLENNKFSGNLPSINPANLRDFNVSNNNLN 200 (654)
Q Consensus 150 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~ 200 (654)
+|+|++ ++ .+..+++|+.|++++|++++..+-..+++|+.|+|++|+++
T Consensus 116 ~n~l~~-~~-~l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~ 164 (308)
T 1h6u_A 116 STQITD-VT-PLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVS 164 (308)
T ss_dssp TSCCCC-CG-GGTTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECCSSCCC
T ss_pred CCCCCC-ch-hhcCCCCCCEEECCCCccCcCccccCCCCccEEEccCCcCC
Confidence 555553 22 25555555555565555555444225555555556555555
No 356
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.53 E-value=9.5e-15 Score=137.16 Aligned_cols=113 Identities=27% Similarity=0.371 Sum_probs=102.0
Q ss_pred eEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccccccccchhhccccccceecc
Q 036334 69 FVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLDL 148 (654)
Q Consensus 69 ~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 148 (654)
.++.|+|++|.+.+ +++..|..+++|++|+|++|.|++..+..|.++++|++|+|++|+|++..+..+..+++|++|+|
T Consensus 29 ~l~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 107 (177)
T 2o6r_A 29 SATRLELESNKLQS-LPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELAL 107 (177)
T ss_dssp TCSEEECCSSCCCC-CCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCcEEEeCCCcccE-eCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEEC
Confidence 48999999999985 56557899999999999999999777777899999999999999999888888999999999999
Q ss_pred ccccccccCCCccccccccCccccccccccCCCC
Q 036334 149 SSNNFSGKIPFDVNNLTHLTGLFLENNKFSGNLP 182 (654)
Q Consensus 149 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~ 182 (654)
++|+|++..+..+..+++|+.|+|++|.+.+..+
T Consensus 108 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 108 DTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred cCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 9999997666667899999999999999997665
No 357
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.53 E-value=1.7e-14 Score=134.47 Aligned_cols=107 Identities=26% Similarity=0.334 Sum_probs=97.0
Q ss_pred ccEEEeccCCccCcCCCCCCCccccccccccccccccccchhhccccccceeccccccccccCCCccccccccCcccccc
Q 036334 95 LRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLDLSSNNFSGKIPFDVNNLTHLTGLFLEN 174 (654)
Q Consensus 95 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~ 174 (654)
.+.|++++|.|+ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 478999999999 5787664 8999999999999999899999999999999999999977777789999999999999
Q ss_pred ccccCCCCCC--CCCCCCeEEccCCcccccCc
Q 036334 175 NKFSGNLPSI--NPANLRDFNVSNNNLNGSIP 204 (654)
Q Consensus 175 N~l~~~~~~~--~~~~L~~L~l~~N~l~g~~p 204 (654)
|+|++.++.. .+++|+.|+|++|++++..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 9999988864 88999999999999986644
No 358
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.53 E-value=6.9e-15 Score=163.47 Aligned_cols=104 Identities=26% Similarity=0.351 Sum_probs=58.8
Q ss_pred ccEEEeccCCccCcCCCCCCCccccccccccccccccccchhhccccccceeccccccccccCCCccccccccCcccccc
Q 036334 95 LRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLDLSSNNFSGKIPFDVNNLTHLTGLFLEN 174 (654)
Q Consensus 95 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~ 174 (654)
|+.|+|++|.|++ +|. |+++++|+.|+|++|+|+ .+|..|+++++|+.|+|++|+|++ +| .++.+++|+.|+|++
T Consensus 443 L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~ 517 (567)
T 1dce_A 443 VRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCN 517 (567)
T ss_dssp CSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCS
T ss_pred ceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCC
Confidence 5556666665553 443 555556666666666655 555555556666666666666553 44 555556666666666
Q ss_pred ccccCCC-CCC--CCCCCCeEEccCCcccccC
Q 036334 175 NKFSGNL-PSI--NPANLRDFNVSNNNLNGSI 203 (654)
Q Consensus 175 N~l~~~~-~~~--~~~~L~~L~l~~N~l~g~~ 203 (654)
|+|++.+ |.. .+++|+.|+|++|+|++..
T Consensus 518 N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 549 (567)
T 1dce_A 518 NRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEE 549 (567)
T ss_dssp SCCCSSSTTGGGGGCTTCCEEECTTSGGGGSS
T ss_pred CCCCCCCCcHHHhcCCCCCEEEecCCcCCCCc
Confidence 6665553 332 5555666666666665443
No 359
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.52 E-value=9.8e-15 Score=152.90 Aligned_cols=155 Identities=21% Similarity=0.254 Sum_probs=114.4
Q ss_pred CCCceeeEEcCCC---------CeEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCC-CCCCcccccc-cc
Q 036334 55 ACNWVGVECDANR---------SFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPS-DFSNLTLLRS-LY 123 (654)
Q Consensus 55 ~C~w~gv~C~~~~---------~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~-L~ 123 (654)
-|.|..|.|+++. .+++.|+|++|.|+ .||++.|.+|++|++|+|++|.+.+.+|. .|.++++|++ ++
T Consensus 8 ~C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~ 86 (350)
T 4ay9_X 8 HCSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRI 86 (350)
T ss_dssp EEETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCS-EECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEE
T ss_pred EeeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCC-CcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhc
Confidence 3789999997531 35889999999997 68887899999999999999999877764 6888988765 67
Q ss_pred ccccccccccchhhccccccceeccccccccccCCCc-------------------------cccc-cccCccccccccc
Q 036334 124 LQSNQFSGVFPASVTRMNRLTRLDLSSNNFSGKIPFD-------------------------VNNL-THLTGLFLENNKF 177 (654)
Q Consensus 124 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-------------------------~~~l-~~L~~L~l~~N~l 177 (654)
+++|+|+...|..|..+++|++|++++|+|++..+.. |..+ ..|+.|+|++|+|
T Consensus 87 ~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i 166 (350)
T 4ay9_X 87 EKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGI 166 (350)
T ss_dssp EEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCC
T ss_pred ccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccc
Confidence 7789999888888999999999999999887443322 2222 2466788888888
Q ss_pred cCCCCCC-CCCCCCeEEccC-CcccccCcc-cccCCC
Q 036334 178 SGNLPSI-NPANLRDFNVSN-NNLNGSIPA-TLSKFP 211 (654)
Q Consensus 178 ~~~~~~~-~~~~L~~L~l~~-N~l~g~~p~-~~~~~~ 211 (654)
+...+.. ...+|+.|++++ |.++ .+|. .|..++
T Consensus 167 ~~i~~~~f~~~~L~~l~l~~~n~l~-~i~~~~f~~l~ 202 (350)
T 4ay9_X 167 QEIHNSAFNGTQLDELNLSDNNNLE-ELPNDVFHGAS 202 (350)
T ss_dssp CEECTTSSTTEEEEEEECTTCTTCC-CCCTTTTTTEE
T ss_pred cCCChhhccccchhHHhhccCCccc-CCCHHHhccCc
Confidence 7665554 555677777764 4444 5553 344333
No 360
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.52 E-value=1.4e-14 Score=145.30 Aligned_cols=140 Identities=20% Similarity=0.269 Sum_probs=108.7
Q ss_pred eEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccccccccchhhccccccceecc
Q 036334 69 FVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLDL 148 (654)
Q Consensus 69 ~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 148 (654)
+++.|+|++|++. .++ .+..+++|++|+|++|.|++..+ |.++++|++|+|++|++++ +|.. .. ++|+.|+|
T Consensus 42 ~L~~L~l~~n~i~-~l~--~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~~-~~-~~L~~L~L 113 (263)
T 1xeu_A 42 GVQNFNGDNSNIQ-SLA--GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNGI-PS-ACLSRLFL 113 (263)
T ss_dssp TCSEEECTTSCCC-CCT--TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTTC-CC-SSCCEEEC
T ss_pred cCcEEECcCCCcc-cch--HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCcc-cc-CcccEEEc
Confidence 4888999999886 355 48889999999999999986554 8889999999999999985 4433 33 88999999
Q ss_pred ccccccccCCCccccccccCccccccccccCCCCCCCCCCCCeEEccCCcccccCcccccCCCC---ccccCCCC
Q 036334 149 SSNNFSGKIPFDVNNLTHLTGLFLENNKFSGNLPSINPANLRDFNVSNNNLNGSIPATLSKFPQ---SSFTGNLD 220 (654)
Q Consensus 149 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~~~~---l~~~~n~~ 220 (654)
++|+|++ ++ .+..+++|+.|+|++|+|++..+-..+++|+.|+|++|++++. ..+.++++ +.+.+|+.
T Consensus 114 ~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~~~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~ 184 (263)
T 1xeu_A 114 DNNELRD-TD-SLIHLKNLEILSIRNNKLKSIVMLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKC 184 (263)
T ss_dssp CSSCCSB-SG-GGTTCTTCCEEECTTSCCCBCGGGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEE
T ss_pred cCCccCC-Ch-hhcCcccccEEECCCCcCCCChHHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcc
Confidence 9999985 44 5888999999999999998875333788999999999999865 45555544 44555543
No 361
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.52 E-value=2.6e-15 Score=157.44 Aligned_cols=150 Identities=19% Similarity=0.164 Sum_probs=125.4
Q ss_pred CeEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccccccccc-hhhcccccccee
Q 036334 68 SFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFP-ASVTRMNRLTRL 146 (654)
Q Consensus 68 ~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L 146 (654)
.+++.|+|++|.+.+..+ ..|.++++|++|+|++|.|++..+..|.++++|++|+|++|++++..+ ..+.++++|++|
T Consensus 76 ~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L 154 (353)
T 2z80_A 76 VNLQALVLTSNGINTIEE-DSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQIL 154 (353)
T ss_dssp TTCCEEECTTSCCCEECT-TTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEE
T ss_pred CCCCEEECCCCccCccCH-hhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEE
Confidence 459999999999986544 469999999999999999996555559999999999999999995444 478999999999
Q ss_pred ccccc-cccccCCCccccccccCccccccccccCCCCCC--CCCCCCeEEccCCcccccCccc----ccCCCCccccCCC
Q 036334 147 DLSSN-NFSGKIPFDVNNLTHLTGLFLENNKFSGNLPSI--NPANLRDFNVSNNNLNGSIPAT----LSKFPQSSFTGNL 219 (654)
Q Consensus 147 ~l~~N-~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~g~~p~~----~~~~~~l~~~~n~ 219 (654)
++++| .+++..+..+.++++|+.|++++|++++..|.. .+++|++|+|++|+++ .+|.. +.++..|.+.+|.
T Consensus 155 ~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~-~~~~~~~~~~~~L~~L~L~~n~ 233 (353)
T 2z80_A 155 RVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI-LLLEIFVDVTSSVECLELRDTD 233 (353)
T ss_dssp EEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCST-THHHHHHHHTTTEEEEEEESCB
T ss_pred ECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccc-cchhhhhhhcccccEEECCCCc
Confidence 99999 577667788999999999999999999987765 8899999999999996 55643 3445556666554
No 362
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.51 E-value=2.2e-14 Score=146.09 Aligned_cols=134 Identities=22% Similarity=0.368 Sum_probs=115.6
Q ss_pred eEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccccccccchhhccccccceecc
Q 036334 69 FVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLDL 148 (654)
Q Consensus 69 ~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 148 (654)
+++.|++++|++.. ++ .+..+++|++|+|++|.+++..+ +.++++|++|+|++|++++ +| .+..+++|++|+|
T Consensus 47 ~L~~L~l~~~~i~~-~~--~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L 119 (291)
T 1h6t_A 47 SIDQIIANNSDIKS-VQ--GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSL 119 (291)
T ss_dssp TCCEEECTTSCCCC-CT--TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEEC
T ss_pred cccEEEccCCCccc-Ch--hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEEC
Confidence 48999999999975 44 48999999999999999997655 9999999999999999996 44 4999999999999
Q ss_pred ccccccccCCCccccccccCccccccccccCCCCCC-CCCCCCeEEccCCcccccCcccccCCCCcc
Q 036334 149 SSNNFSGKIPFDVNNLTHLTGLFLENNKFSGNLPSI-NPANLRDFNVSNNNLNGSIPATLSKFPQSS 214 (654)
Q Consensus 149 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~L~~L~l~~N~l~g~~p~~~~~~~~l~ 214 (654)
++|+|++. ..+..+++|+.|++++|+|++. +.. .+++|+.|+|++|++++..| +..+++|.
T Consensus 120 ~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~ 181 (291)
T 1h6t_A 120 EHNGISDI--NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQ 181 (291)
T ss_dssp TTSCCCCC--GGGGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCC
T ss_pred CCCcCCCC--hhhcCCCCCCEEEccCCcCCcc-hhhccCCCCCEEEccCCccccchh--hcCCCccC
Confidence 99999964 4789999999999999999987 444 89999999999999996555 66666544
No 363
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.50 E-value=3.2e-14 Score=159.12 Aligned_cols=141 Identities=26% Similarity=0.362 Sum_probs=117.5
Q ss_pred CeEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccccccccchhhccccccceec
Q 036334 68 SFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLD 147 (654)
Q Consensus 68 ~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 147 (654)
.+++.|+|++|.+.+. ++ +..+++|+.|+|++|.|++ +| .|.++++|+.|+|++|+|++. ..+..|++|+.|+
T Consensus 65 ~~L~~L~Ls~N~l~~~-~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~ 137 (605)
T 1m9s_A 65 PNVTKLFLNGNKLTDI-KP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLY 137 (605)
T ss_dssp TTCCEEECTTSCCCCC-GG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEE
T ss_pred CCCCEEEeeCCCCCCC-hh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCCC--ccccCCCccCEEE
Confidence 4589999999999864 33 8999999999999999985 44 799999999999999999963 4688999999999
Q ss_pred cccccccccCCCccccccccCccccccccccCCCCCCCCCCCCeEEccCCcccccCcccccCCCCc---cccCCC
Q 036334 148 LSSNNFSGKIPFDVNNLTHLTGLFLENNKFSGNLPSINPANLRDFNVSNNNLNGSIPATLSKFPQS---SFTGNL 219 (654)
Q Consensus 148 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~~~~l---~~~~n~ 219 (654)
|++|+|++. ..+..|++|+.|+|++|+|++.+|...+++|+.|+|++|+|++ +| .+..+++| .+.+|.
T Consensus 138 Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~l~~l~~L~~L~Ls~N~i~~-l~-~l~~l~~L~~L~L~~N~ 208 (605)
T 1m9s_A 138 LGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQE 208 (605)
T ss_dssp CCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEECCSEE
T ss_pred CCCCccCCc--hhhcccCCCCEEECcCCcCCCchhhccCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEccCCc
Confidence 999999965 5788999999999999999998884588999999999999985 44 45555554 444543
No 364
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.50 E-value=4.2e-14 Score=132.34 Aligned_cols=105 Identities=23% Similarity=0.297 Sum_probs=95.1
Q ss_pred ccEEEeccCCccCcCCCCCCCccccccccccccccccccchhhccccccceeccccccccccCCCccccccccCcccccc
Q 036334 95 LRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLDLSSNNFSGKIPFDVNNLTHLTGLFLEN 174 (654)
Q Consensus 95 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~ 174 (654)
-+.+++++|.++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 378999999997 7887775 8999999999999999999999999999999999999976666679999999999999
Q ss_pred ccccCCCCCC--CCCCCCeEEccCCccccc
Q 036334 175 NKFSGNLPSI--NPANLRDFNVSNNNLNGS 202 (654)
Q Consensus 175 N~l~~~~~~~--~~~~L~~L~l~~N~l~g~ 202 (654)
|+|++.++.. .+++|+.|+|++|++...
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCTT
T ss_pred CccceeCHHHhccccCCCEEEeCCCCcccc
Confidence 9999888863 789999999999999843
No 365
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.46 E-value=7.9e-14 Score=151.94 Aligned_cols=133 Identities=32% Similarity=0.418 Sum_probs=88.4
Q ss_pred eEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccccccccchhhccccccceecc
Q 036334 69 FVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLDL 148 (654)
Q Consensus 69 ~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 148 (654)
+++.|+|++|.+.+ ++ .+..+++|++|+|++|.+++..+ +.++++|+.|+|++|++++..+ +..+++|+.|+|
T Consensus 222 ~L~~L~l~~n~l~~-~~--~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L 294 (466)
T 1o6v_A 222 NLDELSLNGNQLKD-IG--TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLEL 294 (466)
T ss_dssp TCCEEECCSSCCCC-CG--GGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEEC
T ss_pred CCCEEECCCCCccc-ch--hhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEc
Confidence 47777777777764 22 46777777777777777775544 6677777777777777775443 666777777777
Q ss_pred ccccccccCCCccccccccCccccccccccCCCCCCCCCCCCeEEccCCcccccCcccccCCCC
Q 036334 149 SSNNFSGKIPFDVNNLTHLTGLFLENNKFSGNLPSINPANLRDFNVSNNNLNGSIPATLSKFPQ 212 (654)
Q Consensus 149 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~~~~ 212 (654)
++|++++..+ +..+++|+.|+|++|++++..|...+++|+.|++++|++++. ..+.++++
T Consensus 295 ~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~ 354 (466)
T 1o6v_A 295 NENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDV--SSLANLTN 354 (466)
T ss_dssp CSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGGGGGCTTCCEEECCSSCCCCC--GGGTTCTT
T ss_pred CCCcccCchh--hcCCCCCCEEECcCCcCCCchhhccCccCCEeECCCCccCCc--hhhccCCC
Confidence 7777775443 666777777777777777666644666777777777776643 23444443
No 366
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.46 E-value=3e-14 Score=159.63 Aligned_cols=151 Identities=26% Similarity=0.361 Sum_probs=106.3
Q ss_pred CCccCCCCCCCceee--------EEcCCCCeEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCccc
Q 036334 47 VQWNASDSACNWVGV--------ECDANRSFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTL 118 (654)
Q Consensus 47 ~~W~~~~~~C~w~gv--------~C~~~~~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 118 (654)
.+|....+||.|.|. .|.... ++.|++++|++. .+|.. +. ++|++|+|++|.|+ .+|. .+++
T Consensus 13 ~~W~~~~~~~~~~~r~~~~~~~~~c~~~~--l~~L~ls~n~L~-~lp~~-l~--~~L~~L~L~~N~l~-~lp~---~l~~ 82 (622)
T 3g06_A 13 SAWRRAAPAEESRGRAAVVQKMRACLNNG--NAVLNVGESGLT-TLPDC-LP--AHITTLVIPDNNLT-SLPA---LPPE 82 (622)
T ss_dssp HHHHHTCCGGGHHHHHHHHHHHHHHHHHC--CCEEECCSSCCS-CCCSC-CC--TTCSEEEECSCCCS-CCCC---CCTT
T ss_pred HHHHhcCCcchhccccccCcccccccCCC--CcEEEecCCCcC-ccChh-hC--CCCcEEEecCCCCC-CCCC---cCCC
Confidence 468777789999663 343333 888999999987 67763 43 78999999999988 5665 5688
Q ss_pred cccccccccccccccchhhccccccceeccccccccccCCCccccccccCccccccccccCCCCCCCCCCCCeEEccCCc
Q 036334 119 LRSLYLQSNQFSGVFPASVTRMNRLTRLDLSSNNFSGKIPFDVNNLTHLTGLFLENNKFSGNLPSINPANLRDFNVSNNN 198 (654)
Q Consensus 119 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~ 198 (654)
|++|+|++|+|+ .+|. .+++|++|+|++|+|++ +|. .+++|+.|++++|+|++.+. .+++|++|+|++|+
T Consensus 83 L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~lp~--~l~~L~~L~Ls~N~ 152 (622)
T 3g06_A 83 LRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTSLPV--LPPGLQELSVSDNQ 152 (622)
T ss_dssp CCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSCCCC--CCTTCCEEECCSSC
T ss_pred CCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCcCCC--CCCCCCEEECcCCc
Confidence 889999999888 4565 67888888888888884 444 45677777777777776443 24667777777777
Q ss_pred ccccCcccccCCCCccccCC
Q 036334 199 LNGSIPATLSKFPQSSFTGN 218 (654)
Q Consensus 199 l~g~~p~~~~~~~~l~~~~n 218 (654)
|+ .+|..+.++..|.+.+|
T Consensus 153 l~-~l~~~~~~L~~L~L~~N 171 (622)
T 3g06_A 153 LA-SLPALPSELCKLWAYNN 171 (622)
T ss_dssp CS-CCCCCCTTCCEEECCSS
T ss_pred CC-CcCCccCCCCEEECCCC
Confidence 76 35555555555544433
No 367
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.46 E-value=9.4e-14 Score=150.64 Aligned_cols=139 Identities=22% Similarity=0.193 Sum_probs=92.5
Q ss_pred CeEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccccccccchhhccccccceec
Q 036334 68 SFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLD 147 (654)
Q Consensus 68 ~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 147 (654)
..++.|++++|...+.++ ++.+++|++|+|++|.|++ +| ++.+++|+.|+|++|++++. .++.+++|+.|+
T Consensus 148 ~~L~~L~l~~n~~~~~~~---~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~ 218 (457)
T 3bz5_A 148 TQLTELDCHLNKKITKLD---VTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLD 218 (457)
T ss_dssp TTCCEEECTTCSCCCCCC---CTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEE
T ss_pred CcCCEEECCCCCcccccc---cccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEE
Confidence 347778888887666662 6777888888888888875 44 77777788888888887764 377777778888
Q ss_pred cccccccccCCCccccccccCccccccccccCCCCCC--CCC-------CCCeEEccCCcccccCcc-cccCCCCccccC
Q 036334 148 LSSNNFSGKIPFDVNNLTHLTGLFLENNKFSGNLPSI--NPA-------NLRDFNVSNNNLNGSIPA-TLSKFPQSSFTG 217 (654)
Q Consensus 148 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~-------~L~~L~l~~N~l~g~~p~-~~~~~~~l~~~~ 217 (654)
|++|+|++ +| +..+++|+.|++++|+|++.++.. .+. +|+.|++++|++.|.+|. .+.++..+.+.+
T Consensus 219 Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~~~~l~~L~~L~Ls~ 295 (457)
T 3bz5_A 219 CSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQAEGCRKIKELDVTH 295 (457)
T ss_dssp CCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCTTCCCCCCTT
T ss_pred CcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHHHCCCCCEEeccCCCCCEEECCCCccCCcccccccccCCEEECCC
Confidence 88887775 55 677777777777777777655332 221 445555666665566652 223444444444
Q ss_pred C
Q 036334 218 N 218 (654)
Q Consensus 218 n 218 (654)
|
T Consensus 296 n 296 (457)
T 3bz5_A 296 N 296 (457)
T ss_dssp C
T ss_pred C
Confidence 4
No 368
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.46 E-value=3.1e-14 Score=133.53 Aligned_cols=123 Identities=18% Similarity=0.183 Sum_probs=103.4
Q ss_pred cccCCCCccEEEeccCCccCcCCCCCCCcc-ccccccccccccccccchhhccccccceeccccccccccCCCccccccc
Q 036334 88 TLGKLSQLRVLSLRSNRLSGEIPSDFSNLT-LLRSLYLQSNQFSGVFPASVTRMNRLTRLDLSSNNFSGKIPFDVNNLTH 166 (654)
Q Consensus 88 ~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~ 166 (654)
.+.++++|++|+|++|.++ .+| .+..+. +|++|+|++|+|++. ..+..+++|++|+|++|+|++..+..+..+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~-~i~-~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIP-VIE-NLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCC-SCC-CGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCc-hhH-HhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 4778899999999999999 455 466665 999999999999975 68999999999999999999655555599999
Q ss_pred cCccccccccccCCCC--CC-CCCCCCeEEccCCcccccCccc----ccCCCCccc
Q 036334 167 LTGLFLENNKFSGNLP--SI-NPANLRDFNVSNNNLNGSIPAT----LSKFPQSSF 215 (654)
Q Consensus 167 L~~L~l~~N~l~~~~~--~~-~~~~L~~L~l~~N~l~g~~p~~----~~~~~~l~~ 215 (654)
|+.|+|++|+|+...+ .. .+++|+.|+|++|+++ .+|.. +..+++|..
T Consensus 90 L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~ 144 (176)
T 1a9n_A 90 LTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRV 144 (176)
T ss_dssp CCEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSE
T ss_pred CCEEECCCCcCCcchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccce
Confidence 9999999999976554 33 7899999999999998 66764 777766654
No 369
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.45 E-value=6.8e-14 Score=146.11 Aligned_cols=143 Identities=26% Similarity=0.351 Sum_probs=105.8
Q ss_pred CeEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccccccccchhhccccccceec
Q 036334 68 SFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLD 147 (654)
Q Consensus 68 ~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 147 (654)
..++.|++++|.+.+ +++ +..+++|+.|++++|.+++..+ +..+++|++|+|++|++++..+ +..+++|++|+
T Consensus 177 ~~L~~L~l~~n~l~~-~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~ 249 (347)
T 4fmz_A 177 TDLYSLSLNYNQIED-ISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLE 249 (347)
T ss_dssp TTCSEEECTTSCCCC-CGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred CCCCEEEccCCcccc-ccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEE
Confidence 358889999988864 332 7788888888888888885544 7788888888888888885544 77888888888
Q ss_pred cccccccccCCCccccccccCccccccccccCCCCCCCCCCCCeEEccCCcccccCcccccCCCCc---cccCCC
Q 036334 148 LSSNNFSGKIPFDVNNLTHLTGLFLENNKFSGNLPSINPANLRDFNVSNNNLNGSIPATLSKFPQS---SFTGNL 219 (654)
Q Consensus 148 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~~~~l---~~~~n~ 219 (654)
|++|.+++ + ..+..+++|+.|++++|++++......+++|+.|+|++|++++..|..+.++++| .+.+|.
T Consensus 250 l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~ 322 (347)
T 4fmz_A 250 IGTNQISD-I-NAVKDLTKLKMLNVGSNQISDISVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNH 322 (347)
T ss_dssp CCSSCCCC-C-GGGTTCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSS
T ss_pred CCCCccCC-C-hhHhcCCCcCEEEccCCccCCChhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCc
Confidence 88888875 3 3577888888888888888875322277788888888888887777766655544 444554
No 370
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.45 E-value=9.6e-14 Score=139.12 Aligned_cols=125 Identities=19% Similarity=0.285 Sum_probs=108.1
Q ss_pred CeEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccccccccchhhccccccceec
Q 036334 68 SFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLD 147 (654)
Q Consensus 68 ~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 147 (654)
.+++.|+|++|.+.+ +++ +..+++|++|+|++|.|++ +|. +.. ++|+.|+|++|++++. + .+..+++|+.|+
T Consensus 63 ~~L~~L~L~~N~i~~-~~~--l~~l~~L~~L~L~~N~l~~-l~~-~~~-~~L~~L~L~~N~l~~~-~-~l~~l~~L~~L~ 134 (263)
T 1xeu_A 63 TNLKELHLSHNQISD-LSP--LKDLTKLEELSVNRNRLKN-LNG-IPS-ACLSRLFLDNNELRDT-D-SLIHLKNLEILS 134 (263)
T ss_dssp TTCCEEECCSSCCCC-CGG--GTTCSSCCEEECCSSCCSC-CTT-CCC-SSCCEEECCSSCCSBS-G-GGTTCTTCCEEE
T ss_pred CCCCEEECCCCccCC-Chh--hccCCCCCEEECCCCccCC-cCc-ccc-CcccEEEccCCccCCC-h-hhcCcccccEEE
Confidence 459999999999986 443 8999999999999999995 453 333 9999999999999964 4 699999999999
Q ss_pred cccccccccCCCccccccccCccccccccccCCCCCCCCCCCCeEEccCCccccc
Q 036334 148 LSSNNFSGKIPFDVNNLTHLTGLFLENNKFSGNLPSINPANLRDFNVSNNNLNGS 202 (654)
Q Consensus 148 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~g~ 202 (654)
|++|+|++. + .+..+++|+.|+|++|+|++...-..+++|+.|+|++|++++.
T Consensus 135 Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 135 IRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNTGGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp CTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBCTTSTTCCCCCEEEEEEEEEECC
T ss_pred CCCCcCCCC-h-HHccCCCCCEEECCCCcCcchHHhccCCCCCEEeCCCCcccCC
Confidence 999999964 4 7899999999999999999883333899999999999999855
No 371
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.44 E-value=1.6e-13 Score=151.82 Aligned_cols=117 Identities=26% Similarity=0.356 Sum_probs=87.9
Q ss_pred eEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccccccccchhhccccccceecc
Q 036334 69 FVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLDL 148 (654)
Q Consensus 69 ~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 148 (654)
+++.|+|++|.+. .+| ..+++|++|+|++|.|++ +|. |.+ +|++|+|++|+|++ +|. .+++|+.|+|
T Consensus 81 ~L~~L~Ls~N~l~-~ip----~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~L 147 (571)
T 3cvr_A 81 QITVLEITQNALI-SLP----ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINA 147 (571)
T ss_dssp TCSEEECCSSCCS-CCC----CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEEC
T ss_pred CCCEEECcCCCCc-ccc----cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeC
Confidence 4888888888887 566 346788888888888886 666 655 88888888888886 565 5778888888
Q ss_pred ccccccccCCCccccccccCccccccccccCCCCCCCCCCCCeEEccCCcccccCcc
Q 036334 149 SSNNFSGKIPFDVNNLTHLTGLFLENNKFSGNLPSINPANLRDFNVSNNNLNGSIPA 205 (654)
Q Consensus 149 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~g~~p~ 205 (654)
++|+|++ +|. .+++|+.|+|++|+|++.++ +. ++|+.|+|++|+|+ .+|.
T Consensus 148 s~N~l~~-lp~---~l~~L~~L~Ls~N~L~~lp~-l~-~~L~~L~Ls~N~L~-~lp~ 197 (571)
T 3cvr_A 148 DNNQLTM-LPE---LPTSLEVLSVRNNQLTFLPE-LP-ESLEALDVSTNLLE-SLPA 197 (571)
T ss_dssp CSSCCSC-CCC---CCTTCCEEECCSSCCSCCCC-CC-TTCCEEECCSSCCS-SCCC
T ss_pred CCCccCc-CCC---cCCCcCEEECCCCCCCCcch-hh-CCCCEEECcCCCCC-chhh
Confidence 8888885 565 46778888888888877443 33 77788888888777 6666
No 372
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.44 E-value=1.2e-13 Score=154.43 Aligned_cols=126 Identities=27% Similarity=0.389 Sum_probs=112.6
Q ss_pred CeEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccccccccchhhccccccceec
Q 036334 68 SFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLD 147 (654)
Q Consensus 68 ~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 147 (654)
.+++.|+|++|.+.+ ++ .|..+++|++|+|++|.|++ + ..|.+|++|+.|+|++|+|++. ..+..|++|+.|+
T Consensus 87 ~~L~~L~Ls~N~l~~-l~--~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~ 159 (605)
T 1m9s_A 87 KNLGWLFLDENKIKD-LS--SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLS 159 (605)
T ss_dssp TTCCEEECCSSCCCC-CT--TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEE
T ss_pred CCCCEEECcCCCCCC-Ch--hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEE
Confidence 458999999999986 44 59999999999999999996 3 3699999999999999999976 6899999999999
Q ss_pred cccccccccCCCccccccccCccccccccccCCCCCCCCCCCCeEEccCCccccc
Q 036334 148 LSSNNFSGKIPFDVNNLTHLTGLFLENNKFSGNLPSINPANLRDFNVSNNNLNGS 202 (654)
Q Consensus 148 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~g~ 202 (654)
|++|+|++..| +..|++|+.|+|++|+|++...-..+++|+.|+|++|++++.
T Consensus 160 Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 160 LEDNQISDIVP--LAGLTKLQNLYLSKNHISDLRALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp CCSSCCCCCGG--GTTCTTCCEEECCSSCCCBCGGGTTCTTCSEEECCSEEEECC
T ss_pred CcCCcCCCchh--hccCCCCCEEECcCCCCCCChHHccCCCCCEEEccCCcCcCC
Confidence 99999997776 999999999999999999874333899999999999999854
No 373
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.43 E-value=1.3e-13 Score=150.09 Aligned_cols=142 Identities=30% Similarity=0.403 Sum_probs=121.1
Q ss_pred CeEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccccccccchhhccccccceec
Q 036334 68 SFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLD 147 (654)
Q Consensus 68 ~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 147 (654)
.+++.|+|++|.+.+..+ +..+++|++|+|++|.+++..+ +..+++|+.|+|++|++++..| +..+++|+.|+
T Consensus 243 ~~L~~L~l~~n~l~~~~~---~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~ 315 (466)
T 1o6v_A 243 TNLTDLDLANNQISNLAP---LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLT 315 (466)
T ss_dssp TTCSEEECCSSCCCCCGG---GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEE
T ss_pred CCCCEEECCCCccccchh---hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEE
Confidence 458999999999987543 8999999999999999997555 8899999999999999997655 88999999999
Q ss_pred cccccccccCCCccccccccCccccccccccCCCCCCCCCCCCeEEccCCcccccCcccccCCCC---ccccCCCC
Q 036334 148 LSSNNFSGKIPFDVNNLTHLTGLFLENNKFSGNLPSINPANLRDFNVSNNNLNGSIPATLSKFPQ---SSFTGNLD 220 (654)
Q Consensus 148 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~~~~---l~~~~n~~ 220 (654)
|++|++++..| +..+++|+.|++++|++++...-..+++|+.|+|++|++++..| +.+++. +...+|..
T Consensus 316 L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~ 387 (466)
T 1o6v_A 316 LYFNNISDISP--VSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAW 387 (466)
T ss_dssp CCSSCCSCCGG--GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEE
T ss_pred CcCCcCCCchh--hccCccCCEeECCCCccCCchhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcc
Confidence 99999998776 78999999999999999987433489999999999999998887 555554 44555544
No 374
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.42 E-value=1.4e-13 Score=152.99 Aligned_cols=127 Identities=24% Similarity=0.340 Sum_probs=97.3
Q ss_pred cccCCCCccEEE-eccCCccCcCCC------CCCC--ccccccccccccccccccchhhccccccceeccccccccccCC
Q 036334 88 TLGKLSQLRVLS-LRSNRLSGEIPS------DFSN--LTLLRSLYLQSNQFSGVFPASVTRMNRLTRLDLSSNNFSGKIP 158 (654)
Q Consensus 88 ~l~~l~~L~~L~-Ls~N~l~~~~p~------~~~~--l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 158 (654)
.++.|++|+.|+ ++.|.+. .++. .+.. ...|+.|+|++|+|++ +|. |+.+++|+.|+|++|+|+ .+|
T Consensus 404 ~l~~l~~L~~L~~l~~n~~~-~L~~l~l~~n~i~~l~~~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp 479 (567)
T 1dce_A 404 TLQYFSTLKAVDPMRAAYLD-DLRSKFLLENSVLKMEYADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALP 479 (567)
T ss_dssp HHHHHHHHHHHCGGGHHHHH-HHHHHHHHHHHHHHHHHTTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCC
T ss_pred HHHHHHhcccCcchhhcccc-hhhhhhhhcccccccCccCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccc
Confidence 567788888888 5555433 1110 0111 1258899999999996 676 999999999999999999 888
Q ss_pred CccccccccCccccccccccCCCCCC-CCCCCCeEEccCCcccccC-cccccCCCCc---cccCCC
Q 036334 159 FDVNNLTHLTGLFLENNKFSGNLPSI-NPANLRDFNVSNNNLNGSI-PATLSKFPQS---SFTGNL 219 (654)
Q Consensus 159 ~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~L~~L~l~~N~l~g~~-p~~~~~~~~l---~~~~n~ 219 (654)
..++.+++|+.|+|++|+|++. |.+ .+++|+.|+|++|+|++.. |..|.++++| .+.+|+
T Consensus 480 ~~~~~l~~L~~L~Ls~N~l~~l-p~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~ 544 (567)
T 1dce_A 480 PALAALRCLEVLQASDNALENV-DGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNS 544 (567)
T ss_dssp GGGGGCTTCCEEECCSSCCCCC-GGGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSG
T ss_pred hhhhcCCCCCEEECCCCCCCCC-cccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCc
Confidence 8999999999999999999985 455 8899999999999999776 8888777665 445554
No 375
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.40 E-value=2.4e-13 Score=142.08 Aligned_cols=109 Identities=25% Similarity=0.264 Sum_probs=87.9
Q ss_pred CCceeeEEcCCCCeEEEeecCCCCccccCCcccccCCCCccEEEecc-CCccCcCCCCCCCccccccccccccccccccc
Q 036334 56 CNWVGVECDANRSFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRS-NRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFP 134 (654)
Q Consensus 56 C~w~gv~C~~~~~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 134 (654)
|.|..|.|++. |+|. .||. |..+++|++|+|++ |.|++..+..|.+|++|+.|+|++|+|++..|
T Consensus 8 C~~~~v~~~~~-----------n~l~-~ip~--l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 73 (347)
T 2ifg_A 8 HGSSGLRCTRD-----------GALD-SLHH--LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAP 73 (347)
T ss_dssp SSSSCEECCSS-----------CCCT-TTTT--SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECT
T ss_pred ccCCEEEcCCC-----------CCCC-ccCC--CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCH
Confidence 88877777542 1454 3665 88899999999996 99997777889999999999999999999888
Q ss_pred hhhccccccceeccccccccccCCCccccccccCccccccccccC
Q 036334 135 ASVTRMNRLTRLDLSSNNFSGKIPFDVNNLTHLTGLFLENNKFSG 179 (654)
Q Consensus 135 ~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 179 (654)
..|.+|++|+.|+|++|+|++..+..+..++ |+.|+|++|.|..
T Consensus 74 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 74 DAFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp TGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred HHhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 8999999999999999999965555555555 8888888887764
No 376
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.40 E-value=6.5e-14 Score=151.80 Aligned_cols=102 Identities=17% Similarity=0.187 Sum_probs=54.0
Q ss_pred CeEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCcccc-------------ccccccccccccccc
Q 036334 68 SFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLL-------------RSLYLQSNQFSGVFP 134 (654)
Q Consensus 68 ~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L-------------~~L~Ls~N~l~~~~p 134 (654)
.+++.|++++|.+ |.+|+ .+++|++|++|+|++|.++|.+|..++++++| ++|++++|++++ +|
T Consensus 11 ~~L~~L~l~~n~l-~~iP~-~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp 87 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPV-EAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LP 87 (454)
T ss_dssp -------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CC
T ss_pred ccchhhhcccCch-hhCCh-hHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CC
Confidence 3488899999999 88887 58999999999999999999999999888765 778888888775 34
Q ss_pred hhhccccccceeccccccccccCCCccccccccCccccccccccC
Q 036334 135 ASVTRMNRLTRLDLSSNNFSGKIPFDVNNLTHLTGLFLENNKFSG 179 (654)
Q Consensus 135 ~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 179 (654)
.. .++|++|++++|++++ +|..+ ++|+.|++++|++++
T Consensus 88 ~~---~~~L~~L~l~~n~l~~-lp~~~---~~L~~L~l~~n~l~~ 125 (454)
T 1jl5_A 88 EL---PPHLESLVASCNSLTE-LPELP---QSLKSLLVDNNNLKA 125 (454)
T ss_dssp SC---CTTCSEEECCSSCCSS-CCCCC---TTCCEEECCSSCCSC
T ss_pred CC---cCCCCEEEccCCcCCc-ccccc---CCCcEEECCCCccCc
Confidence 31 2566667777776664 45332 344444444444443
No 377
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.39 E-value=6.9e-13 Score=143.82 Aligned_cols=129 Identities=22% Similarity=0.180 Sum_probs=94.4
Q ss_pred CeEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccccccccchhhccccccceec
Q 036334 68 SFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLD 147 (654)
Q Consensus 68 ~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 147 (654)
.+++.|+|++|.+.+ ++ ++.+++|++|+|++|.|++. + ++++++|++|+|++|+..+.+ .+..+++|+.|+
T Consensus 106 ~~L~~L~L~~N~l~~-l~---~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ 176 (457)
T 3bz5_A 106 TKLTYLNCDTNKLTK-LD---VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLD 176 (457)
T ss_dssp TTCCEEECCSSCCSC-CC---CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEE
T ss_pred CcCCEEECCCCcCCe-ec---CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEEE
Confidence 458899999999887 43 78889999999999999863 3 777888888888888655555 467777888888
Q ss_pred cccccccccCCCccccccccCccccccccccCCCCCCCCCCCCeEEccCCcccccCcccccCCCC
Q 036334 148 LSSNNFSGKIPFDVNNLTHLTGLFLENNKFSGNLPSINPANLRDFNVSNNNLNGSIPATLSKFPQ 212 (654)
Q Consensus 148 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~~~~ 212 (654)
|++|+|++ +| +..+++|+.|++++|+|++. +-..+++|+.|+|++|++++ +| +..++.
T Consensus 177 ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~-~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~ 234 (457)
T 3bz5_A 177 CSFNKITE-LD--VSQNKLLNRLNCDTNNITKL-DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQ 234 (457)
T ss_dssp CCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC-CCTTCTTCSEEECCSSCCSC-CC--CTTCTT
T ss_pred CCCCccce-ec--cccCCCCCEEECcCCcCCee-ccccCCCCCEEECcCCcccc-cC--ccccCC
Confidence 88888775 44 66777777777777777765 33366777777777777775 55 444443
No 378
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.38 E-value=9.9e-15 Score=151.76 Aligned_cols=141 Identities=18% Similarity=0.234 Sum_probs=98.6
Q ss_pred CeEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCc-CCCCCCCccccccccccccccccccchhhcccccccee
Q 036334 68 SFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGE-IPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRL 146 (654)
Q Consensus 68 ~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 146 (654)
..++.|++++|.+.+..+. +..+++|++|+|++|.+++. +|..+.++++|++|+|++|++++..|..+..+++|++|
T Consensus 70 ~~l~~L~l~~n~l~~~~~~--~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L 147 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE--HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRL 147 (336)
T ss_dssp TTCSEEECTTCEECSCCCS--CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEE
T ss_pred ccceEEEcCCccccccchh--hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEE
Confidence 3477788888888776554 56778888888888887755 66677778888888888888887777778788888888
Q ss_pred ccccc-ccccc-CCCccccccccCccccccc-cccCC-CCCC--CCC-CCCeEEccCC--ccc-ccCcccccCC
Q 036334 147 DLSSN-NFSGK-IPFDVNNLTHLTGLFLENN-KFSGN-LPSI--NPA-NLRDFNVSNN--NLN-GSIPATLSKF 210 (654)
Q Consensus 147 ~l~~N-~l~~~-~p~~~~~l~~L~~L~l~~N-~l~~~-~~~~--~~~-~L~~L~l~~N--~l~-g~~p~~~~~~ 210 (654)
+|++| .+++. ++..+.++++|+.|++++| ++++. ++.. .++ +|+.|+|++| .++ +.+|..+.++
T Consensus 148 ~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~ 221 (336)
T 2ast_B 148 NLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRC 221 (336)
T ss_dssp ECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHC
T ss_pred ECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhC
Confidence 88888 56652 5555677777888888777 77653 2322 556 7777777777 444 3455444333
No 379
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.38 E-value=3.2e-13 Score=141.04 Aligned_cols=141 Identities=26% Similarity=0.355 Sum_probs=108.2
Q ss_pred CeEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccccccccchhhccccccceec
Q 036334 68 SFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLD 147 (654)
Q Consensus 68 ~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 147 (654)
..++.|++++|.+.+..+ +..+++|++|+|++|.+++..+ +..+++|+.|++++|++++..+ +..+++|+.|+
T Consensus 155 ~~L~~L~l~~~~~~~~~~---~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~ 227 (347)
T 4fmz_A 155 TGLNYLTVTESKVKDVTP---IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLK 227 (347)
T ss_dssp TTCCEEECCSSCCCCCGG---GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEE
T ss_pred CCCcEEEecCCCcCCchh---hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEE
Confidence 458889999988865332 7888999999999999885443 8888999999999999986644 88889999999
Q ss_pred cccccccccCCCccccccccCccccccccccCCCCCCCCCCCCeEEccCCcccccCcccccCC---CCccccCCC
Q 036334 148 LSSNNFSGKIPFDVNNLTHLTGLFLENNKFSGNLPSINPANLRDFNVSNNNLNGSIPATLSKF---PQSSFTGNL 219 (654)
Q Consensus 148 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~~---~~l~~~~n~ 219 (654)
|++|++++..+ +..+++|+.|++++|++++......+++|+.|+|++|++++ +| .+..+ ..|.+.+|.
T Consensus 228 l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~L~~n~ 298 (347)
T 4fmz_A 228 IGNNKITDLSP--LANLSQLTWLEIGTNQISDINAVKDLTKLKMLNVGSNQISD-IS-VLNNLSQLNSLFLNNNQ 298 (347)
T ss_dssp CCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCC-CG-GGGGCTTCSEEECCSSC
T ss_pred ccCCccCCCcc--hhcCCCCCEEECCCCccCCChhHhcCCCcCEEEccCCccCC-Ch-hhcCCCCCCEEECcCCc
Confidence 99999985444 88889999999999998875333378899999999999885 34 34444 444455553
No 380
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.38 E-value=9.8e-13 Score=142.49 Aligned_cols=128 Identities=23% Similarity=0.401 Sum_probs=90.6
Q ss_pred eEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccccccccchhhccccccceecc
Q 036334 69 FVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLDL 148 (654)
Q Consensus 69 ~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 148 (654)
.++.|+|++|.+.+ ++. + .++|++|+|++|.+++ +| .|+++++|++|+|++|++++ +|..+ .+|++|++
T Consensus 112 ~L~~L~l~~n~l~~-l~~--~--~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L 180 (454)
T 1jl5_A 112 SLKSLLVDNNNLKA-LSD--L--PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAA 180 (454)
T ss_dssp TCCEEECCSSCCSC-CCS--C--CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEEC
T ss_pred CCcEEECCCCccCc-ccC--C--CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEEC
Confidence 35566666665543 221 1 1578888888888885 67 58888888888888888885 56443 48888888
Q ss_pred ccccccccCCCccccccccCccccccccccCCCCCCCCCCCCeEEccCCcccccCcccccCCCCc
Q 036334 149 SSNNFSGKIPFDVNNLTHLTGLFLENNKFSGNLPSINPANLRDFNVSNNNLNGSIPATLSKFPQS 213 (654)
Q Consensus 149 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~g~~p~~~~~~~~l 213 (654)
++|++++ +| .+.++++|+.|++++|++++.+. ..++|+.|++++|.++ .+|. +.++++|
T Consensus 181 ~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~l~~--~~~~L~~L~l~~n~l~-~lp~-~~~l~~L 239 (454)
T 1jl5_A 181 GNNQLEE-LP-ELQNLPFLTAIYADNNSLKKLPD--LPLSLESIVAGNNILE-ELPE-LQNLPFL 239 (454)
T ss_dssp CSSCCSS-CC-CCTTCTTCCEEECCSSCCSSCCC--CCTTCCEEECCSSCCS-SCCC-CTTCTTC
T ss_pred cCCcCCc-Cc-cccCCCCCCEEECCCCcCCcCCC--CcCcccEEECcCCcCC-cccc-cCCCCCC
Confidence 8888885 56 58888888888888888886332 2257888888888887 6774 5555543
No 381
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.38 E-value=1.5e-14 Score=150.36 Aligned_cols=138 Identities=17% Similarity=0.252 Sum_probs=68.7
Q ss_pred CceeeEEcCCCCeEEEeecCCCCccccCCcccccCC--CCccEEEeccCCccCcCCCCCCCccccccccccccccccc-c
Q 036334 57 NWVGVECDANRSFVYSLRLPGVGLVGPIPPNTLGKL--SQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGV-F 133 (654)
Q Consensus 57 ~w~gv~C~~~~~~v~~L~l~~~~l~~~~~~~~l~~l--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~ 133 (654)
+|.++.|+... ++.|+++++.+. +..+..+ ++|+.|+|++|.+.+..+. +.++++|++|+|++|.+++. +
T Consensus 38 ~W~~~~~~~~~--~~~l~l~~~~~~----~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~ 110 (336)
T 2ast_B 38 RWYRLASDESL--WQTLDLTGKNLH----PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTL 110 (336)
T ss_dssp HHHHHHTCSTT--SSEEECTTCBCC----HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHH
T ss_pred HHHHHhcCchh--heeeccccccCC----HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHH
Confidence 35555543222 445555555443 1234444 5555555555555544332 33455555555555555543 5
Q ss_pred chhhccccccceeccccccccccCCCccccccccCccccccc-cccCC-CCCC--CCCCCCeEEccCC-cccc
Q 036334 134 PASVTRMNRLTRLDLSSNNFSGKIPFDVNNLTHLTGLFLENN-KFSGN-LPSI--NPANLRDFNVSNN-NLNG 201 (654)
Q Consensus 134 p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N-~l~~~-~~~~--~~~~L~~L~l~~N-~l~g 201 (654)
|..+..+++|++|+|++|.+++..+..+..+++|+.|+|++| .+++. ++.. .+++|++|+|++| .+++
T Consensus 111 ~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~ 183 (336)
T 2ast_B 111 HGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTE 183 (336)
T ss_dssp HHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCH
T ss_pred HHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcCh
Confidence 555555555555555555555545545555555555555555 34431 2221 4455555555555 5543
No 382
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.35 E-value=8.3e-13 Score=137.93 Aligned_cols=106 Identities=16% Similarity=0.173 Sum_probs=95.1
Q ss_pred cEEEeccC-CccCcCCCCCCCccccccccccc-cccccccchhhccccccceeccccccccccCCCccccccccCccccc
Q 036334 96 RVLSLRSN-RLSGEIPSDFSNLTLLRSLYLQS-NQFSGVFPASVTRMNRLTRLDLSSNNFSGKIPFDVNNLTHLTGLFLE 173 (654)
Q Consensus 96 ~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~ 173 (654)
..+++++| +|+ .+|. |..+++|+.|+|++ |+|++..|..|.+|++|+.|+|++|+|++..|..|.+|++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 34689998 898 5888 99999999999996 99999888999999999999999999999999999999999999999
Q ss_pred cccccCCCCCC-CCCCCCeEEccCCcccccC
Q 036334 174 NNKFSGNLPSI-NPANLRDFNVSNNNLNGSI 203 (654)
Q Consensus 174 ~N~l~~~~~~~-~~~~L~~L~l~~N~l~g~~ 203 (654)
+|+|++.++.. ...+|+.|+|++|+|....
T Consensus 89 ~N~l~~~~~~~~~~~~L~~l~l~~N~~~c~c 119 (347)
T 2ifg_A 89 FNALESLSWKTVQGLSLQELVLSGNPLHCSC 119 (347)
T ss_dssp SSCCSCCCSTTTCSCCCCEEECCSSCCCCCG
T ss_pred CCccceeCHHHcccCCceEEEeeCCCccCCC
Confidence 99999888765 3344999999999998543
No 383
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.31 E-value=1.1e-13 Score=145.45 Aligned_cols=136 Identities=24% Similarity=0.234 Sum_probs=83.6
Q ss_pred EEEeecCCCCccccCCc---ccccCCC-CccEEEeccCCccCcCCCCCCCc-----cccccccccccccccccchhhccc
Q 036334 70 VYSLRLPGVGLVGPIPP---NTLGKLS-QLRVLSLRSNRLSGEIPSDFSNL-----TLLRSLYLQSNQFSGVFPASVTRM 140 (654)
Q Consensus 70 v~~L~l~~~~l~~~~~~---~~l~~l~-~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~p~~~~~l 140 (654)
++.|+|++|.+.+..+. +.|..++ +|++|+|++|.|++..+..|..+ ++|++|+|++|++++..+..+...
T Consensus 24 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~ 103 (362)
T 3goz_A 24 VTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKT 103 (362)
T ss_dssp CCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHH
T ss_pred ceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHHH
Confidence 67777777776543220 2456666 67777777777776655555554 677777777777776666544443
Q ss_pred -----cccceeccccccccccCCCcccc-----ccccCccccccccccCCCCCC------CC-CCCCeEEccCCcccccC
Q 036334 141 -----NRLTRLDLSSNNFSGKIPFDVNN-----LTHLTGLFLENNKFSGNLPSI------NP-ANLRDFNVSNNNLNGSI 203 (654)
Q Consensus 141 -----~~L~~L~l~~N~l~~~~p~~~~~-----l~~L~~L~l~~N~l~~~~~~~------~~-~~L~~L~l~~N~l~g~~ 203 (654)
++|++|+|++|+|++..+..+.. .++|++|+|++|+|++..... .+ ++|+.|+|++|+|++..
T Consensus 104 l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~ 183 (362)
T 3goz_A 104 LAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKN 183 (362)
T ss_dssp HHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSC
T ss_pred HHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhh
Confidence 67777777777776554433322 246777777777776432211 23 36777777777776555
Q ss_pred cc
Q 036334 204 PA 205 (654)
Q Consensus 204 p~ 205 (654)
+.
T Consensus 184 ~~ 185 (362)
T 3goz_A 184 CA 185 (362)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 384
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.30 E-value=6.9e-14 Score=148.50 Aligned_cols=147 Identities=18% Similarity=0.259 Sum_probs=103.4
Q ss_pred CeEEEeecCCC---CccccCCccc------ccCCCCccEEEeccCCccC----cCCCCCCCccccccccccccccccccc
Q 036334 68 SFVYSLRLPGV---GLVGPIPPNT------LGKLSQLRVLSLRSNRLSG----EIPSDFSNLTLLRSLYLQSNQFSGVFP 134 (654)
Q Consensus 68 ~~v~~L~l~~~---~l~~~~~~~~------l~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p 134 (654)
.+++.|+|++| .+.+.+|... |..+++|++|+|++|.|++ .+|..+.++++|++|+|++|++++..+
T Consensus 60 ~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~ 139 (386)
T 2ca6_A 60 KDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAG 139 (386)
T ss_dssp TTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHH
T ss_pred CCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHH
Confidence 34778888875 4455555421 3678888888888888886 466677788888888888888875544
Q ss_pred hhhcc----c---------cccceecccccccc-ccCC---CccccccccCcccccccccc--C---CCC-CC-CCCCCC
Q 036334 135 ASVTR----M---------NRLTRLDLSSNNFS-GKIP---FDVNNLTHLTGLFLENNKFS--G---NLP-SI-NPANLR 190 (654)
Q Consensus 135 ~~~~~----l---------~~L~~L~l~~N~l~-~~~p---~~~~~l~~L~~L~l~~N~l~--~---~~~-~~-~~~~L~ 190 (654)
..+.. + ++|++|+|++|+|+ +.+| ..+..+++|+.|+|++|+|+ | ..+ .. .+++|+
T Consensus 140 ~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~ 219 (386)
T 2ca6_A 140 AKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELK 219 (386)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCC
T ss_pred HHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCcc
Confidence 44433 3 78888888888887 4444 35667788888888888887 2 333 33 677888
Q ss_pred eEEccCCccc----ccCcccccCCCCcc
Q 036334 191 DFNVSNNNLN----GSIPATLSKFPQSS 214 (654)
Q Consensus 191 ~L~l~~N~l~----g~~p~~~~~~~~l~ 214 (654)
.|+|++|.|+ +.+|..+.++++|.
T Consensus 220 ~L~Ls~n~l~~~g~~~l~~~l~~~~~L~ 247 (386)
T 2ca6_A 220 VLDLQDNTFTHLGSSALAIALKSWPNLR 247 (386)
T ss_dssp EEECCSSCCHHHHHHHHHHHGGGCTTCC
T ss_pred EEECcCCCCCcHHHHHHHHHHccCCCcC
Confidence 8888888886 56777666655543
No 385
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.30 E-value=5e-14 Score=149.57 Aligned_cols=134 Identities=22% Similarity=0.284 Sum_probs=84.3
Q ss_pred CeEEEeecCCCCccc----cCCcccccCCCCccEEEeccCCccCcCCCCC----CCc---------cccccccccccccc
Q 036334 68 SFVYSLRLPGVGLVG----PIPPNTLGKLSQLRVLSLRSNRLSGEIPSDF----SNL---------TLLRSLYLQSNQFS 130 (654)
Q Consensus 68 ~~v~~L~l~~~~l~~----~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~----~~l---------~~L~~L~Ls~N~l~ 130 (654)
.+++.|+|++|.+.+ .++. .+..+++|++|+|++|.|++..+..+ ..+ ++|++|+|++|+++
T Consensus 94 ~~L~~L~Ls~n~l~~~~~~~l~~-~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~ 172 (386)
T 2ca6_A 94 PKLHTVRLSDNAFGPTAQEPLID-FLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLE 172 (386)
T ss_dssp TTCCEEECCSCCCCTTTHHHHHH-HHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCT
T ss_pred CcccEEECCCCcCCHHHHHHHHH-HHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCC
Confidence 347777777777765 3443 46677777777777777764333223 233 67777777777776
Q ss_pred -cccc---hhhccccccceecccccccc--c---cCCCccccccccCcccccccccc----CCCCCC--CCCCCCeEEcc
Q 036334 131 -GVFP---ASVTRMNRLTRLDLSSNNFS--G---KIPFDVNNLTHLTGLFLENNKFS----GNLPSI--NPANLRDFNVS 195 (654)
Q Consensus 131 -~~~p---~~~~~l~~L~~L~l~~N~l~--~---~~p~~~~~l~~L~~L~l~~N~l~----~~~~~~--~~~~L~~L~l~ 195 (654)
+.+| ..+..+++|++|+|++|+|+ | .+|..+..+++|+.|+|++|.|+ +.++.. .+++|+.|+|+
T Consensus 173 ~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~ 252 (386)
T 2ca6_A 173 NGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLN 252 (386)
T ss_dssp GGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECT
T ss_pred cHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECC
Confidence 3444 35566677777777777776 2 34446667777777777777774 333322 56667777777
Q ss_pred CCccccc
Q 036334 196 NNNLNGS 202 (654)
Q Consensus 196 ~N~l~g~ 202 (654)
+|+|++.
T Consensus 253 ~n~i~~~ 259 (386)
T 2ca6_A 253 DCLLSAR 259 (386)
T ss_dssp TCCCCHH
T ss_pred CCCCchh
Confidence 7777654
No 386
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.29 E-value=2.2e-13 Score=143.25 Aligned_cols=146 Identities=24% Similarity=0.232 Sum_probs=117.7
Q ss_pred EeecCCCCccccCCcccccCCCCccEEEeccCCccCcCC----CCCCCcc-ccccccccccccccccchhhccc-----c
Q 036334 72 SLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIP----SDFSNLT-LLRSLYLQSNQFSGVFPASVTRM-----N 141 (654)
Q Consensus 72 ~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p----~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l-----~ 141 (654)
.++|+.|+++|.+|. .+...++|++|||++|.|++..+ ..|.+++ +|++|+|++|++++..+..+..+ +
T Consensus 2 ~~~ls~n~~~~~~~~-~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~ 80 (362)
T 3goz_A 2 NYKLTLHPGSNPVEE-FTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPA 80 (362)
T ss_dssp EEECCCCTTCCHHHH-HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCT
T ss_pred ccccccccchHHHHH-HHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCC
Confidence 367899999998875 46666679999999999997666 6788888 99999999999999888888886 9
Q ss_pred ccceeccccccccccCCCccccc-----cccCccccccccccCCCCCC------C-CCCCCeEEccCCcccccCcccc--
Q 036334 142 RLTRLDLSSNNFSGKIPFDVNNL-----THLTGLFLENNKFSGNLPSI------N-PANLRDFNVSNNNLNGSIPATL-- 207 (654)
Q Consensus 142 ~L~~L~l~~N~l~~~~p~~~~~l-----~~L~~L~l~~N~l~~~~~~~------~-~~~L~~L~l~~N~l~g~~p~~~-- 207 (654)
+|++|+|++|+|++..+..+... ++|+.|+|++|+|++..+.. . .++|++|+|++|.|++..+..+
T Consensus 81 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~ 160 (362)
T 3goz_A 81 NVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQ 160 (362)
T ss_dssp TCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHH
T ss_pred CccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHH
Confidence 99999999999997776655443 89999999999998776542 2 4699999999999996444333
Q ss_pred --c----CCCCccccCC
Q 036334 208 --S----KFPQSSFTGN 218 (654)
Q Consensus 208 --~----~~~~l~~~~n 218 (654)
. ++..|.+.+|
T Consensus 161 ~l~~~~~~L~~L~Ls~n 177 (362)
T 3goz_A 161 ILAAIPANVNSLNLRGN 177 (362)
T ss_dssp HHHTSCTTCCEEECTTS
T ss_pred HHhcCCccccEeeecCC
Confidence 2 4555555555
No 387
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.28 E-value=7.8e-12 Score=140.03 Aligned_cols=94 Identities=24% Similarity=0.375 Sum_probs=57.4
Q ss_pred eEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccccccccchhhccccccceecc
Q 036334 69 FVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLDL 148 (654)
Q Consensus 69 ~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 148 (654)
+++.|+|++|.+. .+|. .+++|++|+|++|.|+ .+|. .+++|++|+|++|+|++ +|. .+++|+.|+|
T Consensus 62 ~L~~L~L~~N~l~-~lp~----~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L 128 (622)
T 3g06_A 62 HITTLVIPDNNLT-SLPA----LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWI 128 (622)
T ss_dssp TCSEEEECSCCCS-CCCC----CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEEC
T ss_pred CCcEEEecCCCCC-CCCC----cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEEC
Confidence 4777777777776 4553 4577777777777777 4554 55677777777777774 333 3455666666
Q ss_pred ccccccccCCCccccccccCccccccccccC
Q 036334 149 SSNNFSGKIPFDVNNLTHLTGLFLENNKFSG 179 (654)
Q Consensus 149 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 179 (654)
++|+|++ +|.. +++|++|+|++|+|++
T Consensus 129 ~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~ 155 (622)
T 3g06_A 129 FGNQLTS-LPVL---PPGLQELSVSDNQLAS 155 (622)
T ss_dssp CSSCCSC-CCCC---CTTCCEEECCSSCCSC
T ss_pred CCCCCCc-CCCC---CCCCCEEECcCCcCCC
Confidence 6666552 4432 2455555555555554
No 388
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.25 E-value=4.1e-14 Score=135.45 Aligned_cols=128 Identities=23% Similarity=0.261 Sum_probs=107.9
Q ss_pred ccCCCCccEEEeccCCccCcCCC------CCCCccccccccccccccccccchhhccccccceeccccccccccCCCccc
Q 036334 89 LGKLSQLRVLSLRSNRLSGEIPS------DFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLDLSSNNFSGKIPFDVN 162 (654)
Q Consensus 89 l~~l~~L~~L~Ls~N~l~~~~p~------~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~ 162 (654)
+.....++.++|+.|.++|.+|. .|.++++|++|+|++|++++ +| .+.++++|++|+|++|+|+ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 56677889999999999999887 89999999999999999996 67 9999999999999999999 7888888
Q ss_pred cccccCccccccccccCCCCCC-CCCCCCeEEccCCcccccCc-ccccCCCC---ccccCCCC
Q 036334 163 NLTHLTGLFLENNKFSGNLPSI-NPANLRDFNVSNNNLNGSIP-ATLSKFPQ---SSFTGNLD 220 (654)
Q Consensus 163 ~l~~L~~L~l~~N~l~~~~~~~-~~~~L~~L~l~~N~l~g~~p-~~~~~~~~---l~~~~n~~ 220 (654)
.+++|+.|+|++|+|++.. .. .+++|+.|+|++|++++.-+ ..+.++++ +.+.+|+.
T Consensus 91 ~~~~L~~L~L~~N~l~~l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l 152 (198)
T 1ds9_A 91 VADTLEELWISYNQIASLS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPL 152 (198)
T ss_dssp HHHHCSEEEEEEEECCCHH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHH
T ss_pred cCCcCCEEECcCCcCCcCC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcc
Confidence 8999999999999999854 44 78899999999999984322 35555554 44555543
No 389
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.22 E-value=4.1e-11 Score=119.73 Aligned_cols=133 Identities=16% Similarity=0.063 Sum_probs=104.5
Q ss_pred ccccccCceeEEEEEecCCcEEEEEEecccc-cCHHHHHHHHHHHhccC-CCccccccEEEEeCCceEEEEEecCCCchh
Q 036334 352 EVLGKGSVGTSYKAVLEEGTTVVVKRLKEVA-VGKREFEMQMEVLGKIK-HDNVVPLRAFYYSKDEKLLVYDYMPAGSLS 429 (654)
Q Consensus 352 ~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~-~~~~~~~~e~~~l~~l~-hpniv~l~~~~~~~~~~~lv~e~~~~g~L~ 429 (654)
..++.|+++.||++... |..+++|+..... .....+.+|+++++.+. +..+.++++++.+.+..|+||||++|.+|.
T Consensus 20 ~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~ 98 (263)
T 3tm0_A 20 KDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCS 98 (263)
T ss_dssp ECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHH
T ss_pred eeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCeehh
Confidence 45777888999999755 6899999987532 33456889999998884 677888999998888999999999999998
Q ss_pred hhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcc--------------------------------------------
Q 036334 430 ALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS-------------------------------------------- 465 (654)
Q Consensus 430 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-------------------------------------------- 465 (654)
+.+.. ......++.+++++++.||+.
T Consensus 99 ~~~~~----------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (263)
T 3tm0_A 99 EEYED----------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPR 168 (263)
T ss_dssp HHCCT----------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHH
T ss_pred hccCC----------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHH
Confidence 76421 112346788999999999971
Q ss_pred --------------CCeecCCCCCCcEEECCCCCeEEeccCCCC
Q 036334 466 --------------GKIVHGNIKASNILLRPDHDACVSDFGLNP 495 (654)
Q Consensus 466 --------------~~ivHrDlk~~NIll~~~~~~kl~Dfgla~ 495 (654)
..++|+|+++.||+++++..+.|+||+.+.
T Consensus 169 ~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 169 ELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp HHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 128999999999999876556799998754
No 390
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.19 E-value=2.8e-11 Score=126.51 Aligned_cols=141 Identities=16% Similarity=0.150 Sum_probs=108.3
Q ss_pred eEEcCCCCeEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccccccccch-hhcc
Q 036334 61 VECDANRSFVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPA-SVTR 139 (654)
Q Consensus 61 v~C~~~~~~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~ 139 (654)
+.|+.. .++-++++|+ .||.+ + .++|++|+|++|+|+...+..|.+|++|++|+|++|++.+.+|. .|.+
T Consensus 7 C~C~~~-----~v~C~~~~Lt-~iP~~-l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~ 77 (350)
T 4ay9_X 7 CHCSNR-----VFLCQESKVT-EIPSD-L--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSN 77 (350)
T ss_dssp SEEETT-----EEEEESTTCC-SCCTT-C--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCS
T ss_pred cEeeCC-----EEEecCCCCC-ccCcC-c--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhc
Confidence 789753 2456788886 57764 3 36899999999999955556799999999999999999777664 6788
Q ss_pred ccccce-eccccccccccCCCccccccccCccccccccccCCCCCC--CCCCCCeEEccC-CcccccCcccccCC
Q 036334 140 MNRLTR-LDLSSNNFSGKIPFDVNNLTHLTGLFLENNKFSGNLPSI--NPANLRDFNVSN-NNLNGSIPATLSKF 210 (654)
Q Consensus 140 l~~L~~-L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~-N~l~g~~p~~~~~~ 210 (654)
+++|+. +.+++|+|+...|..|..+++|++|++++|+|++.++.. ...++..|++.+ |++...-+..|..+
T Consensus 78 L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~ 152 (350)
T 4ay9_X 78 LPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGL 152 (350)
T ss_dssp CTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTS
T ss_pred chhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhc
Confidence 988775 677789999888889999999999999999999877654 445566777755 45553333344443
No 391
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=99.16 E-value=3.1e-13 Score=134.14 Aligned_cols=187 Identities=14% Similarity=0.133 Sum_probs=129.2
Q ss_pred hhHHHHHHHHHhhCCC-CCC-CCcc--C------------CCCCCCceeeEEcCCCCeEEEeecCC---CCccccCCccc
Q 036334 28 TQDKQALLAFLSRTPH-KNR-VQWN--A------------SDSACNWVGVECDANRSFVYSLRLPG---VGLVGPIPPNT 88 (654)
Q Consensus 28 ~~~~~al~~~~~~~~~-~~~-~~W~--~------------~~~~C~w~gv~C~~~~~~v~~L~l~~---~~l~~~~~~~~ 88 (654)
..|++-|+.++...-. .-. ..|. . ....|+|.|+.|+.+..+|+.+...+ ..+.+.+.++.
T Consensus 34 ky~k~~ll~~i~~~~~~~f~p~~~~~~~~~~~ffV~~~~~A~~l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~ 113 (267)
T 3rw6_A 34 KYDKAWLLSMIQSKCSVPFTPIEFHYENTRAQFFVEDASTASALKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQ 113 (267)
T ss_dssp GSCHHHHHHHHHHTCSSCCCCEEEEEETTEEEEEESCHHHHHHHHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHH
T ss_pred ccCHHHHHHHHHHhCCCCcEeEEEEEeCCEEEEEeCChHHHHHHHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHH
Confidence 4477788888665432 111 2342 1 11358999999987766676666655 45667777666
Q ss_pred ccCCCCccEEEeccCCccCcCCC-CCCCcccccc--ccccccccc---cccchhhccccccceeccccccccc--cCCCc
Q 036334 89 LGKLSQLRVLSLRSNRLSGEIPS-DFSNLTLLRS--LYLQSNQFS---GVFPASVTRMNRLTRLDLSSNNFSG--KIPFD 160 (654)
Q Consensus 89 l~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~--L~Ls~N~l~---~~~p~~~~~l~~L~~L~l~~N~l~~--~~p~~ 160 (654)
+..++. .|...+|..++.+.- .|...+.|+. ++++.|+.. +.++....++++|+.|+|++|+|++ .+|..
T Consensus 114 ~~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~ 191 (267)
T 3rw6_A 114 VEQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSI 191 (267)
T ss_dssp HHHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTH
T ss_pred HHHHHH--HHHhccchhccccCHHHcCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhH
Confidence 555554 455556666655543 3677778887 888999544 3333334568999999999999997 56677
Q ss_pred cccccccCccccccccccCCCCCCCCC--CCCeEEccCCcccccCcc-------cccCCCCcccc
Q 036334 161 VNNLTHLTGLFLENNKFSGNLPSINPA--NLRDFNVSNNNLNGSIPA-------TLSKFPQSSFT 216 (654)
Q Consensus 161 ~~~l~~L~~L~l~~N~l~~~~~~~~~~--~L~~L~l~~N~l~g~~p~-------~~~~~~~l~~~ 216 (654)
+..+++|+.|+|++|+|++...-..+. +|++|+|++|++++.+|. .+..+++|...
T Consensus 192 ~~~l~~L~~L~Ls~N~i~~~~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~L 256 (267)
T 3rw6_A 192 VQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRL 256 (267)
T ss_dssp HHHSTTCCEEECTTSCCCSGGGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEE
T ss_pred HhhCCCCCEEECCCCccCCchhhhhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeE
Confidence 889999999999999999863222233 999999999999987773 35677777654
No 392
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.14 E-value=6.9e-13 Score=144.04 Aligned_cols=152 Identities=18% Similarity=0.159 Sum_probs=114.0
Q ss_pred CeEEEeecCCCCcccc----CCcccccCCCCccEEEeccCCccCc----CCCCCCCccccccccccccccccccchhhcc
Q 036334 68 SFVYSLRLPGVGLVGP----IPPNTLGKLSQLRVLSLRSNRLSGE----IPSDFSNLTLLRSLYLQSNQFSGVFPASVTR 139 (654)
Q Consensus 68 ~~v~~L~l~~~~l~~~----~~~~~l~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 139 (654)
.+++.|+|++|.+.+. +.+..+..+++|++|+|++|.++.. ++..+.++++|++|+|++|++++..+..+..
T Consensus 227 ~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~ 306 (461)
T 1z7x_W 227 ASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCE 306 (461)
T ss_dssp TTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHH
T ss_pred CCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHH
Confidence 3488999999988653 2232344688999999999999854 6667778899999999999998766655554
Q ss_pred c-----cccceecccccccccc----CCCccccccccCccccccccccCCCCCC-------CCCCCCeEEccCCcccc--
Q 036334 140 M-----NRLTRLDLSSNNFSGK----IPFDVNNLTHLTGLFLENNKFSGNLPSI-------NPANLRDFNVSNNNLNG-- 201 (654)
Q Consensus 140 l-----~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~~~~-------~~~~L~~L~l~~N~l~g-- 201 (654)
. ++|+.|+|++|.+++. ++..+..+++|+.|+|++|+|++..+.. ..++|+.|+|++|.+++
T Consensus 307 ~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~ 386 (461)
T 1z7x_W 307 TLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSS 386 (461)
T ss_dssp HHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHH
T ss_pred HhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhh
Confidence 3 6899999999998865 4566777889999999999988654321 26789999999999986
Q ss_pred --cCcccccCCC---CccccCCC
Q 036334 202 --SIPATLSKFP---QSSFTGNL 219 (654)
Q Consensus 202 --~~p~~~~~~~---~l~~~~n~ 219 (654)
.+|..+.+++ .+.+.+|.
T Consensus 387 ~~~l~~~l~~~~~L~~L~l~~N~ 409 (461)
T 1z7x_W 387 CSSLAATLLANHSLRELDLSNNC 409 (461)
T ss_dssp HHHHHHHHHHCCCCCEEECCSSS
T ss_pred HHHHHHHHHhCCCccEEECCCCC
Confidence 7777665444 44555554
No 393
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.10 E-value=3e-10 Score=113.08 Aligned_cols=126 Identities=14% Similarity=0.104 Sum_probs=95.2
Q ss_pred cccCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHhccCCCc--cccccEEEEeCCceEEEEEecCCCchhhhh
Q 036334 355 GKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDN--VVPLRAFYYSKDEKLLVYDYMPAGSLSALL 432 (654)
Q Consensus 355 g~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~hpn--iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l 432 (654)
+.|..+.||++...+|+.+++|+.... ....+.+|+.+++.+.+.+ +.++++++..++..++||||++|.+|. .
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~--~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~--~ 104 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSG--ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL--S 104 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSC--TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--T
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcc--cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--c
Confidence 356669999998777888999997654 2346788999988886544 456888887777889999999998884 2
Q ss_pred ccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccC----------------------------------------------
Q 036334 433 HGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSG---------------------------------------------- 466 (654)
Q Consensus 433 ~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~---------------------------------------------- 466 (654)
.. .+ ...++.++++.+..||+..
T Consensus 105 ~~--------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (264)
T 1nd4_A 105 SH--------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFAR 173 (264)
T ss_dssp SC--------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHH
T ss_pred Cc--------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHH
Confidence 21 11 2256677777788887532
Q ss_pred -----------CeecCCCCCCcEEECCCCCeEEeccCCCC
Q 036334 467 -----------KIVHGNIKASNILLRPDHDACVSDFGLNP 495 (654)
Q Consensus 467 -----------~ivHrDlk~~NIll~~~~~~kl~Dfgla~ 495 (654)
.++|+|++|.||++++++.+.|+|||.+.
T Consensus 174 l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 174 LKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp HHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred HHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 19999999999999877667799999865
No 394
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.09 E-value=1.1e-12 Score=142.43 Aligned_cols=150 Identities=19% Similarity=0.221 Sum_probs=117.3
Q ss_pred eEEEeecCCCCcccc----CCcccccCCCCccEEEeccCCccCcC-----CCCCCCccccccccccccccccc----cch
Q 036334 69 FVYSLRLPGVGLVGP----IPPNTLGKLSQLRVLSLRSNRLSGEI-----PSDFSNLTLLRSLYLQSNQFSGV----FPA 135 (654)
Q Consensus 69 ~v~~L~l~~~~l~~~----~~~~~l~~l~~L~~L~Ls~N~l~~~~-----p~~~~~l~~L~~L~Ls~N~l~~~----~p~ 135 (654)
+++.|+|++|.+.+. ++. .+..+++|++|+|++|.+++.. +..+..+++|++|+|++|++++. ++.
T Consensus 200 ~L~~L~L~~n~l~~~~~~~l~~-~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~ 278 (461)
T 1z7x_W 200 QLEALKLESCGVTSDNCRDLCG-IVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCR 278 (461)
T ss_dssp CCCEEECTTSCCBTTHHHHHHH-HHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHH
T ss_pred CceEEEccCCCCcHHHHHHHHH-HHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHH
Confidence 599999999999764 444 5788999999999999988532 33344689999999999999975 788
Q ss_pred hhccccccceeccccccccccCCCcccc-----ccccCccccccccccCCC----CCC--CCCCCCeEEccCCcccccCc
Q 036334 136 SVTRMNRLTRLDLSSNNFSGKIPFDVNN-----LTHLTGLFLENNKFSGNL----PSI--NPANLRDFNVSNNNLNGSIP 204 (654)
Q Consensus 136 ~~~~l~~L~~L~l~~N~l~~~~p~~~~~-----l~~L~~L~l~~N~l~~~~----~~~--~~~~L~~L~l~~N~l~g~~p 204 (654)
.+..+++|++|+|++|.|++..+..+.. .++|+.|+|++|.+++.. +.. .+++|+.|+|++|++++..+
T Consensus 279 ~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~ 358 (461)
T 1z7x_W 279 VLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGV 358 (461)
T ss_dssp HHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHH
T ss_pred HHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccH
Confidence 8888999999999999998654444433 269999999999998752 222 67899999999999987655
Q ss_pred cccc--------CCCCccccCCC
Q 036334 205 ATLS--------KFPQSSFTGNL 219 (654)
Q Consensus 205 ~~~~--------~~~~l~~~~n~ 219 (654)
..+. ++..|.+.+|.
T Consensus 359 ~~l~~~l~~~~~~L~~L~L~~n~ 381 (461)
T 1z7x_W 359 RELCQGLGQPGSVLRVLWLADCD 381 (461)
T ss_dssp HHHHHHHTSTTCCCCEEECTTSC
T ss_pred HHHHHHHcCCCCceEEEECCCCC
Confidence 5443 55666666653
No 395
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.07 E-value=4.7e-10 Score=117.59 Aligned_cols=137 Identities=20% Similarity=0.303 Sum_probs=104.1
Q ss_pred ccccccCceeEEEEEecCCcEEEEEEec--ccc--cCHHHHHHHHHHHhccC--CCccccccEEEEeC---CceEEEEEe
Q 036334 352 EVLGKGSVGTSYKAVLEEGTTVVVKRLK--EVA--VGKREFEMQMEVLGKIK--HDNVVPLRAFYYSK---DEKLLVYDY 422 (654)
Q Consensus 352 ~~lg~G~fg~Vy~~~~~~g~~vavK~~~--~~~--~~~~~~~~e~~~l~~l~--hpniv~l~~~~~~~---~~~~lv~e~ 422 (654)
+.|+.|.++.||+.... +..+++|+.. ... .....+.+|+.+++.+. +..+.+++.++.+. +..|+||||
T Consensus 44 ~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~ 122 (359)
T 3dxp_A 44 EQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEF 122 (359)
T ss_dssp EECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEEC
T ss_pred EEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEe
Confidence 45889999999998876 4678888876 332 23456788999998887 45578888888766 347999999
Q ss_pred cCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcc-------------------------------------
Q 036334 423 MPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS------------------------------------- 465 (654)
Q Consensus 423 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~------------------------------------- 465 (654)
++|..+.+.. ...++..++..++.++++.|+.||..
T Consensus 123 v~G~~l~~~~-------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (359)
T 3dxp_A 123 VSGRVLWDQS-------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIP 195 (359)
T ss_dssp CCCBCCCCTT-------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCH
T ss_pred cCCeecCCCc-------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCCh
Confidence 9998775422 12377888899999999999999961
Q ss_pred --------------------CCeecCCCCCCcEEECCCCC--eEEeccCCCCC
Q 036334 466 --------------------GKIVHGNIKASNILLRPDHD--ACVSDFGLNPL 496 (654)
Q Consensus 466 --------------------~~ivHrDlk~~NIll~~~~~--~kl~Dfgla~~ 496 (654)
..++|+|+++.||+++.++. +.|+||+.+..
T Consensus 196 ~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 196 AMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 24999999999999998764 68999998764
No 396
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.00 E-value=4.6e-12 Score=133.27 Aligned_cols=62 Identities=15% Similarity=0.225 Sum_probs=27.3
Q ss_pred cccccccccccccccc----cchhhccccccceecccccccccc----CCCccccccccCcccccccccc
Q 036334 117 TLLRSLYLQSNQFSGV----FPASVTRMNRLTRLDLSSNNFSGK----IPFDVNNLTHLTGLFLENNKFS 178 (654)
Q Consensus 117 ~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~ 178 (654)
++|++|+|++|+|+.. ++..+..+++|++|+|++|.|+.. +...+..+++|+.|+|++|.|+
T Consensus 155 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~ 224 (372)
T 3un9_A 155 CQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAG 224 (372)
T ss_dssp CCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCC
T ss_pred CccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCC
Confidence 4455555555554431 222334444455555555554421 1223334444555555555544
No 397
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.93 E-value=1.4e-09 Score=112.48 Aligned_cols=55 Identities=11% Similarity=0.146 Sum_probs=38.2
Q ss_pred eEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCcccccccccc
Q 036334 69 FVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQ 125 (654)
Q Consensus 69 ~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 125 (654)
.++.|+|++ ++. .|+...|.++++|+.|+|++|.+....+..|.++.+|..|.++
T Consensus 102 ~L~~l~L~~-~i~-~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~ 156 (329)
T 3sb4_A 102 TLEKVILSE-KIK-NIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLG 156 (329)
T ss_dssp TCCC-CBCT-TCC-EECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTT
T ss_pred CCcEEECCc-ccc-chhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCc
Confidence 388888888 665 5777789999999999999998764444455555444444433
No 398
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.88 E-value=1.8e-11 Score=128.69 Aligned_cols=150 Identities=18% Similarity=0.143 Sum_probs=108.5
Q ss_pred eEEEeecCCCCccccCCccccc-----CCCCccEEEeccCCccCcCCCCC-CCccccccccccccccccccchhhc----
Q 036334 69 FVYSLRLPGVGLVGPIPPNTLG-----KLSQLRVLSLRSNRLSGEIPSDF-SNLTLLRSLYLQSNQFSGVFPASVT---- 138 (654)
Q Consensus 69 ~v~~L~l~~~~l~~~~~~~~l~-----~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~~~~---- 138 (654)
.++.|+|++|.++..-.. .|. ..++|++|+|++|.|+..-...+ ..+++|+.|+|++|+|++.....+.
T Consensus 73 ~L~~L~Ls~n~l~~~~~~-~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 73 SLRQLNLAGVRMTPVKCT-VVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TCCEEECTTSCCCHHHHH-HHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hCCEEEecCCCCCHHHHH-HHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 488999999998653221 222 33799999999999975433333 3578999999999999876555553
Q ss_pred -cccccceeccccccccc----cCCCccccccccCccccccccccCCC----CC-C-CCCCCCeEEccCCccccc----C
Q 036334 139 -RMNRLTRLDLSSNNFSG----KIPFDVNNLTHLTGLFLENNKFSGNL----PS-I-NPANLRDFNVSNNNLNGS----I 203 (654)
Q Consensus 139 -~l~~L~~L~l~~N~l~~----~~p~~~~~l~~L~~L~l~~N~l~~~~----~~-~-~~~~L~~L~l~~N~l~g~----~ 203 (654)
..++|++|+|++|.|+. .++..+..+++|++|+|++|+|++.- .. . .+++|+.|+|++|.|+.. +
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l 231 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALAL 231 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHH
Confidence 46889999999999974 24445577889999999999998532 11 1 567899999999999853 2
Q ss_pred cccc---cCCCCccccCCC
Q 036334 204 PATL---SKFPQSSFTGNL 219 (654)
Q Consensus 204 p~~~---~~~~~l~~~~n~ 219 (654)
+..+ .++..|.+.+|.
T Consensus 232 ~~~L~~~~~L~~L~Ls~N~ 250 (372)
T 3un9_A 232 ARAAREHPSLELLHLYFNE 250 (372)
T ss_dssp HHHHHHCSSCCEEECTTSS
T ss_pred HHHHHhCCCCCEEeccCCC
Confidence 3333 445566666664
No 399
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.88 E-value=1.2e-09 Score=111.52 Aligned_cols=178 Identities=19% Similarity=0.250 Sum_probs=116.7
Q ss_pred ccccccCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHhccC-CCc--cccccEEEEeCC---ceEEEEEecCC
Q 036334 352 EVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIK-HDN--VVPLRAFYYSKD---EKLLVYDYMPA 425 (654)
Q Consensus 352 ~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~-hpn--iv~l~~~~~~~~---~~~lv~e~~~~ 425 (654)
+.++.|....||+.. ..+++|+.... .....+.+|.++++.+. +.. +.+++......+ ..|+|||+++|
T Consensus 26 ~~~~~G~~n~v~~v~----~~~vlR~~~~~-~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G 100 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN----RDFIFKFPKHS-RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKG 100 (304)
T ss_dssp CEEEECSSEEEEEST----TSEEEEEESSH-HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCC
T ss_pred EecCCCCcceEEEEC----CEEEEEecCCc-chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCC
Confidence 347899999999863 56888886533 23467889999998873 333 333444333332 24899999999
Q ss_pred CchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcc----------------------------------------
Q 036334 426 GSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS---------------------------------------- 465 (654)
Q Consensus 426 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~---------------------------------------- 465 (654)
..+.+... ..++..++..++.++++.++.||..
T Consensus 101 ~~l~~~~~-------~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 173 (304)
T 3sg8_A 101 VPLTPLLL-------NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKV 173 (304)
T ss_dssp EECCHHHH-------HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHH
T ss_pred eECCcccc-------ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHH
Confidence 88875432 1266777777888888888887740
Q ss_pred -----------------CCeecCCCCCCcEEECC--CCCeEEeccCCCCCcCCCC------CC---Ccc-------ccc-
Q 036334 466 -----------------GKIVHGNIKASNILLRP--DHDACVSDFGLNPLFGNTT------PP---TRV-------AGY- 509 (654)
Q Consensus 466 -----------------~~ivHrDlk~~NIll~~--~~~~kl~Dfgla~~~~~~~------~~---~~~-------~~y- 509 (654)
..++|+|+++.||++++ ...+.|+||+.+....... .. .+. .+|
T Consensus 174 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~ 253 (304)
T 3sg8_A 174 DDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYK 253 (304)
T ss_dssp HHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHT
T ss_pred HHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcC
Confidence 13799999999999998 4557899999876543211 00 000 002
Q ss_pred -cC-ccccCCCCCCcchhHHHHHHHHHHHHhCCCCC
Q 036334 510 -RA-PEVVETRKVTFKSDVYSFGVLLLELLTGKAPN 543 (654)
Q Consensus 510 -~a-PE~~~~~~~~~~~DvwslGvil~el~tg~~pf 543 (654)
.. |+... ......+.|+++.++|++.+|..+|
T Consensus 254 ~~~~~~~~~--r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 254 HKDIPTVLE--KYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp CSCHHHHHH--HHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred CCCcHHHHH--HHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 11 22111 1122368999999999999998664
No 400
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.82 E-value=2.5e-09 Score=110.57 Aligned_cols=79 Identities=10% Similarity=0.168 Sum_probs=56.9
Q ss_pred eEEEeecCCCCcc----------c---------cCCcccccC--------CCCccEEEeccCCccCcCCCCCCCcccccc
Q 036334 69 FVYSLRLPGVGLV----------G---------PIPPNTLGK--------LSQLRVLSLRSNRLSGEIPSDFSNLTLLRS 121 (654)
Q Consensus 69 ~v~~L~l~~~~l~----------~---------~~~~~~l~~--------l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 121 (654)
+++.|||++|.+. + .||...|.+ +++|+.|+|.+ .++..-+..|.++++|+.
T Consensus 50 ~L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~~I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~ 128 (329)
T 3sb4_A 50 SLKVLDISNAEIKMYSGKAGTYPNGKFYIYMANFVPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKI 128 (329)
T ss_dssp TCCEEEEEEEEECCEEESSSSSGGGCCEEECTTEECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTCCE
T ss_pred cCeEEecCcceeEEecCccccccccccccccccccCHHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCcccce
Confidence 4777888777765 0 466677888 99999999999 888666668999999999
Q ss_pred ccccccccccccchhhccccccceecc
Q 036334 122 LYLQSNQFSGVFPASVTRMNRLTRLDL 148 (654)
Q Consensus 122 L~Ls~N~l~~~~p~~~~~l~~L~~L~l 148 (654)
|+|++|.++...+..|.++.++..+.+
T Consensus 129 l~l~~n~i~~i~~~aF~~~~~l~~l~~ 155 (329)
T 3sb4_A 129 CQIRKKTAPNLLPEALADSVTAIFIPL 155 (329)
T ss_dssp EEBCCSSCCEECTTSSCTTTCEEEECT
T ss_pred EEcCCCCccccchhhhcCCCceEEecC
Confidence 999999876454444444444444433
No 401
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.62 E-value=8.1e-10 Score=123.79 Aligned_cols=113 Identities=11% Similarity=0.116 Sum_probs=60.2
Q ss_pred cCCCCccEEEeccCCccCcCCCCCCC-cccccccccc----ccccccc-----cchhhccccccceeccccc--cccccC
Q 036334 90 GKLSQLRVLSLRSNRLSGEIPSDFSN-LTLLRSLYLQ----SNQFSGV-----FPASVTRMNRLTRLDLSSN--NFSGKI 157 (654)
Q Consensus 90 ~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~Ls----~N~l~~~-----~p~~~~~l~~L~~L~l~~N--~l~~~~ 157 (654)
..+++|++|+|+.|.+++..+..++. +++|+.|+|+ .|++++. ++..+.++++|+.|+|++| .+++..
T Consensus 375 ~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~ 454 (592)
T 3ogk_B 375 QGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLG 454 (592)
T ss_dssp HHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHH
T ss_pred hhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHH
Confidence 34566666666666666554444443 5666666664 5556542 3334555666666666532 244333
Q ss_pred CCccc-cccccCccccccccccCC-CCCC--CCCCCCeEEccCCccccc
Q 036334 158 PFDVN-NLTHLTGLFLENNKFSGN-LPSI--NPANLRDFNVSNNNLNGS 202 (654)
Q Consensus 158 p~~~~-~l~~L~~L~l~~N~l~~~-~~~~--~~~~L~~L~l~~N~l~g~ 202 (654)
+..+. .+++|+.|+|++|++++. ++.. .+++|+.|+|++|++++.
T Consensus 455 ~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~ 503 (592)
T 3ogk_B 455 LSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSER 503 (592)
T ss_dssp HHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHH
T ss_pred HHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHH
Confidence 33332 255566666666665542 1221 455666666666665533
No 402
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.60 E-value=4e-09 Score=118.08 Aligned_cols=137 Identities=10% Similarity=0.070 Sum_probs=84.6
Q ss_pred EEEeecCCCC-ccccCCcccccCCCCccEEEeccCCccCc----CCCCCCCccccccccccccccc----cccchhhccc
Q 036334 70 VYSLRLPGVG-LVGPIPPNTLGKLSQLRVLSLRSNRLSGE----IPSDFSNLTLLRSLYLQSNQFS----GVFPASVTRM 140 (654)
Q Consensus 70 v~~L~l~~~~-l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~----~~~p~~~~~l 140 (654)
++.|+|+++. +...--+..+..+++|++|+|++|.+++. ++..+.++++|++|+|++|+++ +.++..+.++
T Consensus 140 L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~ 219 (592)
T 3ogk_B 140 LETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNC 219 (592)
T ss_dssp CCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHC
T ss_pred CcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhC
Confidence 7888888775 21111111234678888888888887654 3334456788888888888887 3455556678
Q ss_pred cccceeccccccccccCCCccccccccCccccccccccCC---CC-CC-CCCCCCeEEccCCcccccCccccc
Q 036334 141 NRLTRLDLSSNNFSGKIPFDVNNLTHLTGLFLENNKFSGN---LP-SI-NPANLRDFNVSNNNLNGSIPATLS 208 (654)
Q Consensus 141 ~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~---~~-~~-~~~~L~~L~l~~N~l~g~~p~~~~ 208 (654)
++|+.|+|++|.+.+ +|..+.++++|+.|+++.+..... .. .. .+++|+.|+++++.. +.+|..+.
T Consensus 220 ~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~-~~l~~~~~ 290 (592)
T 3ogk_B 220 RSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGP-NEMPILFP 290 (592)
T ss_dssp TTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCT-TTGGGGGG
T ss_pred CCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccch-hHHHHHHh
Confidence 888888888888774 556677777777777765322211 11 11 455666666665432 24444443
No 403
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.59 E-value=1.1e-09 Score=108.56 Aligned_cols=111 Identities=20% Similarity=0.251 Sum_probs=74.1
Q ss_pred cccCCcccccCCCCccE--EEeccCCcc---CcCCCCCCCcccccccccccccccc--ccchhhccccccceeccccccc
Q 036334 81 VGPIPPNTLGKLSQLRV--LSLRSNRLS---GEIPSDFSNLTLLRSLYLQSNQFSG--VFPASVTRMNRLTRLDLSSNNF 153 (654)
Q Consensus 81 ~~~~~~~~l~~l~~L~~--L~Ls~N~l~---~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~l~~N~l 153 (654)
.+.+.-..|...+.|+. ++++.|... +.++....++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|
T Consensus 129 ~~~LdLs~l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i 208 (267)
T 3rw6_A 129 QQALDLKGLRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNEL 208 (267)
T ss_dssp TTEEECTTGGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCC
T ss_pred ccccCHHHcCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCcc
Confidence 33333333555566666 677777433 2222222467788888888888887 4567777888888888888888
Q ss_pred cccCCCcccccc--ccCccccccccccCCCCC--------C-CCCCCCeEE
Q 036334 154 SGKIPFDVNNLT--HLTGLFLENNKFSGNLPS--------I-NPANLRDFN 193 (654)
Q Consensus 154 ~~~~p~~~~~l~--~L~~L~l~~N~l~~~~~~--------~-~~~~L~~L~ 193 (654)
++. ..+..+. +|+.|+|++|.+.+.+|. . .+++|+.||
T Consensus 209 ~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 209 KSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp CSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred CCc--hhhhhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 854 3355555 788888888888876663 1 567777775
No 404
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.52 E-value=2.7e-07 Score=94.74 Aligned_cols=129 Identities=18% Similarity=0.221 Sum_probs=93.5
Q ss_pred ccccccCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHhccCC----CccccccEEEEeCCceEEEEEecCCCc
Q 036334 352 EVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKH----DNVVPLRAFYYSKDEKLLVYDYMPAGS 427 (654)
Q Consensus 352 ~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~h----pniv~l~~~~~~~~~~~lv~e~~~~g~ 427 (654)
+.++.|....||+. |..+++|+..... ....+.+|.++++.+.+ ..+.+++++ +..++||||++|.+
T Consensus 43 ~~l~~G~~n~vy~v----g~~~vlR~~~~~~-~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i~G~~ 113 (320)
T 3r70_A 43 RYLSSGDDSDTFLC----NEQYVVKVPKRDS-VRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYIKGER 113 (320)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESSHH-HHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEECCCCBC
T ss_pred EeCCCCCCceEEEE----CCEEEEEeCCcHH-HHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEeecCCcc
Confidence 46889999999998 6778888864432 23458889998888865 123344443 56789999999988
Q ss_pred hhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccC-----------------------------------------
Q 036334 428 LSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSG----------------------------------------- 466 (654)
Q Consensus 428 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~----------------------------------------- 466 (654)
+..... ..++..++..++.++++.++.||+..
T Consensus 114 l~~~~~-------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (320)
T 3r70_A 114 ITYEQY-------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEML 186 (320)
T ss_dssp CCHHHH-------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHHH
T ss_pred cccccc-------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccch
Confidence 864332 12566666777777777777777321
Q ss_pred ---------------------CeecCCCCCCcEEECCCCCeEEeccCCCCC
Q 036334 467 ---------------------KIVHGNIKASNILLRPDHDACVSDFGLNPL 496 (654)
Q Consensus 467 ---------------------~ivHrDlk~~NIll~~~~~~kl~Dfgla~~ 496 (654)
.++|+|+++.||+++.+..+.|+||+.+..
T Consensus 187 ~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 187 EHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp HHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 259999999999999866679999998754
No 405
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.51 E-value=2.9e-09 Score=100.22 Aligned_cols=113 Identities=14% Similarity=0.187 Sum_probs=82.6
Q ss_pred cccCCCCccEEEeccC-CccCc----CCCCCCCccccccccccccccccc----cchhhccccccceecccccccccc--
Q 036334 88 TLGKLSQLRVLSLRSN-RLSGE----IPSDFSNLTLLRSLYLQSNQFSGV----FPASVTRMNRLTRLDLSSNNFSGK-- 156 (654)
Q Consensus 88 ~l~~l~~L~~L~Ls~N-~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~-- 156 (654)
.+...++|++|+|++| .|... +...+...++|++|+|++|+|+.. +...+...++|++|+|++|.|+..
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~ 110 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGI 110 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHH
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHH
Confidence 4667788889999888 77632 334456678889999999988753 344555667899999999988743
Q ss_pred --CCCccccccccCcccc--ccccccCCCC----CC--CCCCCCeEEccCCccc
Q 036334 157 --IPFDVNNLTHLTGLFL--ENNKFSGNLP----SI--NPANLRDFNVSNNNLN 200 (654)
Q Consensus 157 --~p~~~~~l~~L~~L~l--~~N~l~~~~~----~~--~~~~L~~L~l~~N~l~ 200 (654)
+...+...++|+.|+| ++|.|...-. .. ..++|++|+|++|.+.
T Consensus 111 ~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 111 LALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 3455677788999999 7888875321 11 4578999999999885
No 406
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.36 E-value=2.1e-08 Score=112.29 Aligned_cols=125 Identities=18% Similarity=0.216 Sum_probs=81.7
Q ss_pred cCCCCccEEEeccCCccCcCCCCCC-Ccccccccccccc-ccccc-cchhhccccccceeccccccccccCCCcc----c
Q 036334 90 GKLSQLRVLSLRSNRLSGEIPSDFS-NLTLLRSLYLQSN-QFSGV-FPASVTRMNRLTRLDLSSNNFSGKIPFDV----N 162 (654)
Q Consensus 90 ~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N-~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~p~~~----~ 162 (654)
..+++|++|+|++|.+++..+..+. .+++|++|+|++| .+++. ++..+.++++|++|+|++|.+++..+..+ .
T Consensus 102 ~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~ 181 (594)
T 2p1m_B 102 SSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPD 181 (594)
T ss_dssp HHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCT
T ss_pred HhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhh
Confidence 3567888888888887766655554 5788888888887 55543 44555578888888888888775444333 3
Q ss_pred cccccCcccccccc--ccCC-CCCC--CCCCCCeEEccCC-cccccCcccccCCCCccc
Q 036334 163 NLTHLTGLFLENNK--FSGN-LPSI--NPANLRDFNVSNN-NLNGSIPATLSKFPQSSF 215 (654)
Q Consensus 163 ~l~~L~~L~l~~N~--l~~~-~~~~--~~~~L~~L~l~~N-~l~g~~p~~~~~~~~l~~ 215 (654)
.+++|+.|++++|. ++.. ++.. .+++|+.|+|++| .+. .+|..+.++++|..
T Consensus 182 ~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~-~l~~~~~~~~~L~~ 239 (594)
T 2p1m_B 182 TYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLE-KLATLLQRAPQLEE 239 (594)
T ss_dssp TCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHH-HHHHHHHHCTTCSE
T ss_pred cCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHH-HHHHHHhcCCcceE
Confidence 56688888888876 2110 1111 4678888888887 444 36666655555443
No 407
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.32 E-value=2.8e-06 Score=86.54 Aligned_cols=133 Identities=20% Similarity=0.215 Sum_probs=89.7
Q ss_pred ccccccCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHhccCCC---ccccccEEEE-eCCceEEEEEecCCCc
Q 036334 352 EVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHD---NVVPLRAFYY-SKDEKLLVYDYMPAGS 427 (654)
Q Consensus 352 ~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~hp---niv~l~~~~~-~~~~~~lv~e~~~~g~ 427 (654)
+.++.|....||+. |..+++|+-.. ......+.+|.++|+.+.+. .|.+.+.++. ..+..++||||++|..
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~~-~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~ 99 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPKS-QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQI 99 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESS-HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEE
T ss_pred eecCCCcceeEEEE----CCEEEEEecCC-chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeE
Confidence 34778888899987 56788888532 22345788999999998653 2455666654 3455789999999988
Q ss_pred hhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcc------------------------------------------
Q 036334 428 LSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS------------------------------------------ 465 (654)
Q Consensus 428 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~------------------------------------------ 465 (654)
+.+.... .++..++..++.++++.|+.||+.
T Consensus 100 l~~~~~~-------~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l 172 (306)
T 3tdw_A 100 LGEDGMA-------VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYL 172 (306)
T ss_dssp CHHHHHT-------TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHH
T ss_pred Cchhhhh-------hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHH
Confidence 8763211 134444444555555554444421
Q ss_pred -----------------CCeecCCCCCCcEEECC---CCCe-EEeccCCCCC
Q 036334 466 -----------------GKIVHGNIKASNILLRP---DHDA-CVSDFGLNPL 496 (654)
Q Consensus 466 -----------------~~ivHrDlk~~NIll~~---~~~~-kl~Dfgla~~ 496 (654)
..++|+|+++.||+++. ++.+ .|+||+.+..
T Consensus 173 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 173 TLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 13699999999999997 4554 7999997653
No 408
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.31 E-value=7.2e-09 Score=116.04 Aligned_cols=109 Identities=15% Similarity=0.096 Sum_probs=57.1
Q ss_pred CCCccEEEeccCCccCcCCCCCC-Ccccccccccc--c----ccccc-----ccchhhccccccceeccccccccccCCC
Q 036334 92 LSQLRVLSLRSNRLSGEIPSDFS-NLTLLRSLYLQ--S----NQFSG-----VFPASVTRMNRLTRLDLSSNNFSGKIPF 159 (654)
Q Consensus 92 l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls--~----N~l~~-----~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 159 (654)
+++|++|+++.|.+++.....+. ++++|+.|+|+ + |++++ .++..+..+++|+.|+|++ .+++..+.
T Consensus 371 ~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~ 449 (594)
T 2p1m_B 371 CPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFE 449 (594)
T ss_dssp CTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHH
T ss_pred chhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHH
Confidence 56666666666666644433343 35666666666 3 44442 1222245556666666655 44433333
Q ss_pred cccc-ccccCccccccccccCCCCCC---CCCCCCeEEccCCcccc
Q 036334 160 DVNN-LTHLTGLFLENNKFSGNLPSI---NPANLRDFNVSNNNLNG 201 (654)
Q Consensus 160 ~~~~-l~~L~~L~l~~N~l~~~~~~~---~~~~L~~L~l~~N~l~g 201 (654)
.+.. +++|+.|+|++|.+++..... .+++|+.|+|++|++++
T Consensus 450 ~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~ 495 (594)
T 2p1m_B 450 YIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGD 495 (594)
T ss_dssp HHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCH
T ss_pred HHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcH
Confidence 3333 556666666666654332211 35566666666666643
No 409
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.30 E-value=3.6e-06 Score=84.80 Aligned_cols=73 Identities=16% Similarity=0.203 Sum_probs=58.5
Q ss_pred ccccccCceeEEEEEecCCcEEEEEEeccc-ccCHHHHHHHHHHHhccCCC---ccccccEEEEeCCceEEEEEecCCCc
Q 036334 352 EVLGKGSVGTSYKAVLEEGTTVVVKRLKEV-AVGKREFEMQMEVLGKIKHD---NVVPLRAFYYSKDEKLLVYDYMPAGS 427 (654)
Q Consensus 352 ~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~-~~~~~~~~~e~~~l~~l~hp---niv~l~~~~~~~~~~~lv~e~~~~g~ 427 (654)
+.|+.|.++.||++...+|+.++||+.... ......+..|++.|+.+.+. .+.+++++. ..++||||++++.
T Consensus 21 ~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g~~ 96 (288)
T 3d1u_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDERP 96 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCCC
T ss_pred eeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecccCC
Confidence 468999999999999888999999996543 22346789999999999865 466777653 4689999999987
Q ss_pred h
Q 036334 428 L 428 (654)
Q Consensus 428 L 428 (654)
+
T Consensus 97 ~ 97 (288)
T 3d1u_A 97 P 97 (288)
T ss_dssp C
T ss_pred C
Confidence 5
No 410
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.28 E-value=3.7e-06 Score=83.87 Aligned_cols=131 Identities=18% Similarity=0.187 Sum_probs=89.6
Q ss_pred ccccCce-eEEEEEec-CCcEEEEEEecccccCHHHHHHHHHHHhccC-CCccccccEEEEeCCceEEEEEecCCCchhh
Q 036334 354 LGKGSVG-TSYKAVLE-EGTTVVVKRLKEVAVGKREFEMQMEVLGKIK-HDNVVPLRAFYYSKDEKLLVYDYMPAGSLSA 430 (654)
Q Consensus 354 lg~G~fg-~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~-hpniv~l~~~~~~~~~~~lv~e~~~~g~L~~ 430 (654)
+..|..| .||+.... ++..+++|+-... ...++.+|...|+.+. +--|-++++++.+.+..++|||++++.++.+
T Consensus 32 ~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~--~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~ 109 (272)
T 4gkh_A 32 DNVGQSGATIYRLYGKPNAPELFLKHGKGS--VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQ 109 (272)
T ss_dssp EECSSSSCEEEEEECCTTCCCEEEEEEETH--HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHH
T ss_pred ccCCCcCCeEEEEEecCCCeEEEEEECCCC--CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccccc
Confidence 4456555 68987754 4667899986543 2456788998888774 3236678888888899999999999988766
Q ss_pred hhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhcc---------------------------------------------
Q 036334 431 LLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVS--------------------------------------------- 465 (654)
Q Consensus 431 ~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~--------------------------------------------- 465 (654)
..... ......++.+++..|..||..
T Consensus 110 ~~~~~---------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (272)
T 4gkh_A 110 VLEEY---------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVW 180 (272)
T ss_dssp HHHHC---------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHH
T ss_pred cccCC---------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHH
Confidence 54311 111223344444444444420
Q ss_pred ----------C--CeecCCCCCCcEEECCCCCeEEeccCCCC
Q 036334 466 ----------G--KIVHGNIKASNILLRPDHDACVSDFGLNP 495 (654)
Q Consensus 466 ----------~--~ivHrDlk~~NIll~~~~~~kl~Dfgla~ 495 (654)
. .++|+|+.+.|||++.++.+-|+||+.+.
T Consensus 181 ~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 181 KEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp HHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 0 27899999999999987767799998765
No 411
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.27 E-value=3.5e-08 Score=92.81 Aligned_cols=110 Identities=16% Similarity=0.176 Sum_probs=85.8
Q ss_pred CeEEEeecCCC-Ccccc----CCcccccCCCCccEEEeccCCccCc----CCCCCCCccccccccccccccccc----cc
Q 036334 68 SFVYSLRLPGV-GLVGP----IPPNTLGKLSQLRVLSLRSNRLSGE----IPSDFSNLTLLRSLYLQSNQFSGV----FP 134 (654)
Q Consensus 68 ~~v~~L~l~~~-~l~~~----~~~~~l~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p 134 (654)
..++.|+|++| .+... +.. .+...++|++|+|++|.|... +...+...++|++|+|++|+|++. +.
T Consensus 36 ~~L~~L~L~~n~~i~~~g~~~l~~-~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~ 114 (185)
T 1io0_A 36 PDLEEVNLNNIMNIPVPTLKACAE-ALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALV 114 (185)
T ss_dssp TTCCEEECTTCTTCCHHHHHHHHH-HHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHH
T ss_pred CCCCEEEecCCCCCCHHHHHHHHH-HHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHH
Confidence 34999999999 87542 222 467788999999999999742 334455668899999999999965 46
Q ss_pred hhhccccccceecc--cccccccc----CCCccccccccCcccccccccc
Q 036334 135 ASVTRMNRLTRLDL--SSNNFSGK----IPFDVNNLTHLTGLFLENNKFS 178 (654)
Q Consensus 135 ~~~~~l~~L~~L~l--~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~ 178 (654)
..+...++|++|+| ++|.|... +...+...++|+.|+|++|.|.
T Consensus 115 ~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 115 EALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 67778889999999 88999843 3344566689999999999985
No 412
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.19 E-value=2.9e-06 Score=89.77 Aligned_cols=143 Identities=13% Similarity=0.163 Sum_probs=103.8
Q ss_pred eEEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccccccccchhhccccccceecc
Q 036334 69 FVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLDL 148 (654)
Q Consensus 69 ~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 148 (654)
.++.+.|..+ + ..|+...|.++++|+.|+|.+| ++..-...|.+ .+|+.++| .|.++..-...|.++++|+.+++
T Consensus 204 ~L~~l~lp~~-l-~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l 278 (401)
T 4fdw_A 204 GIEEVLLPVT-L-KEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTT 278 (401)
T ss_dssp CCSEEECCTT-C-CEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEE
T ss_pred ccCEEEeCCc-h-heehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEe
Confidence 3777888754 4 3677778999999999999875 55455556777 78999999 45677566788999999999999
Q ss_pred cccccc-----ccCCCccccccccCccccccccccCCCCCC--CCCCCCeEEccCCcccccCcccccCC--CCccccCC
Q 036334 149 SSNNFS-----GKIPFDVNNLTHLTGLFLENNKFSGNLPSI--NPANLRDFNVSNNNLNGSIPATLSKF--PQSSFTGN 218 (654)
Q Consensus 149 ~~N~l~-----~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~g~~p~~~~~~--~~l~~~~n 218 (654)
.+|.+. ...+..|.+|++|+.++|.+ .++...... .+.+|+.|+|.+| ++..-+.+|.++ ..+.+.+|
T Consensus 279 ~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~~L~~l~l~~n 355 (401)
T 4fdw_A 279 YGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNTGIKEVKVEGT 355 (401)
T ss_dssp ESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSSCCCEEEECCS
T ss_pred CCccccCCcccEECHHHhhCCccCCeEEeCC-ceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCCCCCEEEEcCC
Confidence 888775 34566788999999999984 466544443 7789999999655 653334556554 33444444
No 413
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.18 E-value=2.8e-06 Score=88.50 Aligned_cols=79 Identities=13% Similarity=0.109 Sum_probs=55.1
Q ss_pred ccc-cccCceeEEEEEec-------CCcEEEEEEecccc---c-CHHHHHHHHHHHhccC-C--CccccccEEEEeC---
Q 036334 352 EVL-GKGSVGTSYKAVLE-------EGTTVVVKRLKEVA---V-GKREFEMQMEVLGKIK-H--DNVVPLRAFYYSK--- 413 (654)
Q Consensus 352 ~~l-g~G~fg~Vy~~~~~-------~g~~vavK~~~~~~---~-~~~~~~~e~~~l~~l~-h--pniv~l~~~~~~~--- 413 (654)
+.| +.|....+|+.... ++..+++|+..... . ....+.+|+.+++.+. + -.+.+++.++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 457 78888999988754 26688999865433 1 2346778888887774 2 3466777777654
Q ss_pred CceEEEEEecCCCchhh
Q 036334 414 DEKLLVYDYMPAGSLSA 430 (654)
Q Consensus 414 ~~~~lv~e~~~~g~L~~ 430 (654)
+..++||||++|..+.+
T Consensus 106 g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp SSCEEEEECCCCBCCCB
T ss_pred CCceEEEEecCCCChhh
Confidence 34689999998877654
No 414
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.17 E-value=5.1e-06 Score=86.68 Aligned_cols=73 Identities=10% Similarity=0.020 Sum_probs=54.6
Q ss_pred ccccccCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHhccCCCc--cccccEEEEeC-CceEEEEEecCCCch
Q 036334 352 EVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDN--VVPLRAFYYSK-DEKLLVYDYMPAGSL 428 (654)
Q Consensus 352 ~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~hpn--iv~l~~~~~~~-~~~~lv~e~~~~g~L 428 (654)
+.++.|....+|+... +|..+++|+.... ..+..|+.+++.+.... +.++++++.+. +..|+||||++|..+
T Consensus 47 ~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~~l 121 (362)
T 3ovc_A 47 MQLSEGEESRAFSFDV-GGRGYVLRVNSCA----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVTL 121 (362)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEESCC----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSEET
T ss_pred EECCCCCcceEEEEEE-CCcEEEEEeCCch----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCCCc
Confidence 4578899999999875 4788999987543 35888888888886433 45667666654 568999999988665
Q ss_pred h
Q 036334 429 S 429 (654)
Q Consensus 429 ~ 429 (654)
.
T Consensus 122 ~ 122 (362)
T 3ovc_A 122 Q 122 (362)
T ss_dssp T
T ss_pred c
Confidence 4
No 415
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.14 E-value=4.8e-06 Score=88.08 Aligned_cols=87 Identities=10% Similarity=0.038 Sum_probs=36.7
Q ss_pred CCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccccccccchhhccccccceeccccccccccCCCcccc
Q 036334 84 IPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLDLSSNNFSGKIPFDVNN 163 (654)
Q Consensus 84 ~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~ 163 (654)
|+...|.+ .+|+.++|.+ .++..-+..|.++++|+.++|++|+++......|. ..+|+.+.|.+| ++..-...|.+
T Consensus 149 I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~ 224 (401)
T 4fdw_A 149 IGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLK 224 (401)
T ss_dssp ECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTT
T ss_pred ECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhC
Confidence 33334444 2345554443 33323333444455555555555444422222222 344444444422 33233334444
Q ss_pred ccccCcccccc
Q 036334 164 LTHLTGLFLEN 174 (654)
Q Consensus 164 l~~L~~L~l~~ 174 (654)
+++|+.+++.+
T Consensus 225 ~~~L~~l~l~~ 235 (401)
T 4fdw_A 225 TSQLKTIEIPE 235 (401)
T ss_dssp CTTCCCEECCT
T ss_pred CCCCCEEecCC
Confidence 44444444443
No 416
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.11 E-value=2.7e-07 Score=96.14 Aligned_cols=111 Identities=14% Similarity=0.126 Sum_probs=62.4
Q ss_pred cccCCCCccEEEeccCCccCcCCCCCCCccccccccccccccccccchhhc--cccccceecccc--cccccc-----CC
Q 036334 88 TLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVT--RMNRLTRLDLSS--NNFSGK-----IP 158 (654)
Q Consensus 88 ~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~l~~--N~l~~~-----~p 158 (654)
.+..+++|+.|+|++|.-. .++. +. +++|+.|+|..|.++...-..+. .+++|+.|+|+. |...+. +.
T Consensus 167 ll~~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~ 243 (362)
T 2ra8_A 167 VLDAMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFR 243 (362)
T ss_dssp HHHTCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTG
T ss_pred HHhcCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHH
Confidence 3456677777777776311 2232 32 67777777777776644434443 567777777653 221111 00
Q ss_pred Ccc--ccccccCccccccccccCCCCC-----CCCCCCCeEEccCCcccc
Q 036334 159 FDV--NNLTHLTGLFLENNKFSGNLPS-----INPANLRDFNVSNNNLNG 201 (654)
Q Consensus 159 ~~~--~~l~~L~~L~l~~N~l~~~~~~-----~~~~~L~~L~l~~N~l~g 201 (654)
..+ ..+++|+.|+|++|.+.+..+. ..+++|+.|+|+.|.|++
T Consensus 244 ~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d 293 (362)
T 2ra8_A 244 PLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTD 293 (362)
T ss_dssp GGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBH
T ss_pred HHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCCh
Confidence 111 2456777777777777642211 145677777777777765
No 417
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.08 E-value=8.3e-07 Score=92.40 Aligned_cols=136 Identities=18% Similarity=0.233 Sum_probs=89.5
Q ss_pred CeEEEeecCCCC-ccccCCcccccCCCCccEEEeccCCccCcCCCCCC--Cccccccccccc--cccccc-----cchhh
Q 036334 68 SFVYSLRLPGVG-LVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFS--NLTLLRSLYLQS--NQFSGV-----FPASV 137 (654)
Q Consensus 68 ~~v~~L~l~~~~-l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~--N~l~~~-----~p~~~ 137 (654)
++++.|+|+++. + .+++ +. +++|++|+|..|.++...-..+. ++++|+.|+|+. |...+. +...+
T Consensus 172 P~L~~L~L~g~~~l--~l~~--~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l 246 (362)
T 2ra8_A 172 PLLNNLKIKGTNNL--SIGK--KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLF 246 (362)
T ss_dssp TTCCEEEEECCBTC--BCCS--CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGS
T ss_pred CCCcEEEEeCCCCc--eecc--cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHH
Confidence 458889998773 2 2333 33 78999999998887643333333 678899998863 322211 11122
Q ss_pred --ccccccceeccccccccccCCCcc---ccccccCccccccccccCC----CCCC--CCCCCCeEEccCCcccccCccc
Q 036334 138 --TRMNRLTRLDLSSNNFSGKIPFDV---NNLTHLTGLFLENNKFSGN----LPSI--NPANLRDFNVSNNNLNGSIPAT 206 (654)
Q Consensus 138 --~~l~~L~~L~l~~N~l~~~~p~~~---~~l~~L~~L~l~~N~l~~~----~~~~--~~~~L~~L~l~~N~l~g~~p~~ 206 (654)
..+++|+.|+|++|.+....+..+ ..+++|+.|+|+.|.|.+. ++.. .+++|+.|+|++|.|+...-..
T Consensus 247 ~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~ 326 (362)
T 2ra8_A 247 SKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKE 326 (362)
T ss_dssp CTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHH
T ss_pred hcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHH
Confidence 247899999999998875433223 2578899999999998863 2221 5688999999999887444333
Q ss_pred cc
Q 036334 207 LS 208 (654)
Q Consensus 207 ~~ 208 (654)
|.
T Consensus 327 l~ 328 (362)
T 2ra8_A 327 LQ 328 (362)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 418
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.92 E-value=1.8e-05 Score=83.75 Aligned_cols=73 Identities=10% Similarity=0.139 Sum_probs=48.6
Q ss_pred ccccccCceeEEEEEec-CCcEEEEEEecccc--------cCHHHHHHHHHHHhccCC--Cccc-cccEEEEeCCceEEE
Q 036334 352 EVLGKGSVGTSYKAVLE-EGTTVVVKRLKEVA--------VGKREFEMQMEVLGKIKH--DNVV-PLRAFYYSKDEKLLV 419 (654)
Q Consensus 352 ~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~--------~~~~~~~~e~~~l~~l~h--pniv-~l~~~~~~~~~~~lv 419 (654)
+.||.|.++.||++... ++..++||...... ....++..|.++++.+.. +..+ +++.+ +.+..++|
T Consensus 36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~lv 113 (397)
T 2olc_A 36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTV 113 (397)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEE
T ss_pred EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEEE
Confidence 46899999999999754 46889999865321 123456778888877642 3333 44433 45567899
Q ss_pred EEecCCC
Q 036334 420 YDYMPAG 426 (654)
Q Consensus 420 ~e~~~~g 426 (654)
|||+++.
T Consensus 114 mE~l~g~ 120 (397)
T 2olc_A 114 MEDLSHL 120 (397)
T ss_dssp ECCCTTS
T ss_pred EEeCCCc
Confidence 9999764
No 419
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.89 E-value=6.9e-05 Score=77.15 Aligned_cols=139 Identities=18% Similarity=0.282 Sum_probs=77.8
Q ss_pred cccccCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHhccC-----CCcccccc-E--EEEeCCceEEEEEecC
Q 036334 353 VLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIK-----HDNVVPLR-A--FYYSKDEKLLVYDYMP 424 (654)
Q Consensus 353 ~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~-----hpniv~l~-~--~~~~~~~~~lv~e~~~ 424 (654)
.|+.|..+.||+....+| .+++|+.... ..++..|+.+++.+. .|.++... | +....+..++||||++
T Consensus 39 ~l~gG~~n~~~~v~~~~~-~~vlk~~~~~---~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i~ 114 (346)
T 2q83_A 39 VIQGNQMALVWKVHTDSG-AVCLKRIHRP---EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWIE 114 (346)
T ss_dssp ECC----CEEEEEEETTE-EEEEEEECSC---HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECCC
T ss_pred eccccccCcEEEEEeCCC-CEEEEecCCC---HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEeec
Confidence 466677899999887654 5889998752 234445555554442 34444311 1 1234567899999999
Q ss_pred CCchh--------------hhhccCC-C---C-CC----CCCCHHHHH-------------------------------H
Q 036334 425 AGSLS--------------ALLHGSR-G---S-GR----TPLDWDNRM-------------------------------R 450 (654)
Q Consensus 425 ~g~L~--------------~~l~~~~-~---~-~~----~~l~~~~~~-------------------------------~ 450 (654)
|..+. ..+|... . . .. ..-.|...+ .
T Consensus 115 G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (346)
T 2q83_A 115 GRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEIDG 194 (346)
T ss_dssp CBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHH
T ss_pred CccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHH
Confidence 86542 1112110 0 0 00 012332211 1
Q ss_pred HHHHHHHHHHHhhc------------cCCeecCCCCCCcEEECCCCCeEEeccCCCC
Q 036334 451 IALSAARGLAHLHV------------SGKIVHGNIKASNILLRPDHDACVSDFGLNP 495 (654)
Q Consensus 451 i~~~ia~~l~~LH~------------~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~ 495 (654)
+...+..++++|+. ...++|+|+++.||+++.++.+.|+||+.+.
T Consensus 195 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 195 FIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 11123345566652 2349999999999999888899999998754
No 420
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.58 E-value=1.1e-05 Score=74.21 Aligned_cols=82 Identities=10% Similarity=0.171 Sum_probs=47.1
Q ss_pred CccEEEeccCCccCcCCCCCCCccccccccccccc-cccccchhhccc----cccceecccccc-ccccCCCcccccccc
Q 036334 94 QLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQ-FSGVFPASVTRM----NRLTRLDLSSNN-FSGKIPFDVNNLTHL 167 (654)
Q Consensus 94 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~l~~N~-l~~~~p~~~~~l~~L 167 (654)
+|+.|||+++.|+..--..+.++++|+.|+|+++. +++.--..+..+ ++|++|+|+++. |+..--..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 57777777776664333345666777777777764 665433344443 357777777653 553222234556666
Q ss_pred Cccccccc
Q 036334 168 TGLFLENN 175 (654)
Q Consensus 168 ~~L~l~~N 175 (654)
+.|+|+++
T Consensus 142 ~~L~L~~c 149 (176)
T 3e4g_A 142 KYLFLSDL 149 (176)
T ss_dssp CEEEEESC
T ss_pred CEEECCCC
Confidence 66666655
No 421
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.52 E-value=0.001 Score=67.84 Aligned_cols=74 Identities=15% Similarity=0.102 Sum_probs=49.7
Q ss_pred ccccCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHhccCCC--ccccccEE-----EEeCCceEEEEEecCCC
Q 036334 354 LGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHD--NVVPLRAF-----YYSKDEKLLVYDYMPAG 426 (654)
Q Consensus 354 lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~hp--niv~l~~~-----~~~~~~~~lv~e~~~~g 426 (654)
++ |....||+....+|+.+++|+..........+..|..+++.+... .+.+++.. ....+..++||||++|.
T Consensus 34 l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~G~ 112 (328)
T 1zyl_A 34 LN-SYENRVYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGR 112 (328)
T ss_dssp EC-CSSSEEEEECCTTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCE
T ss_pred ec-CcccceEEEEcCCCCEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecCCC
Confidence 55 777899998777777899999875444566777788887766421 23444432 22345568899999875
Q ss_pred ch
Q 036334 427 SL 428 (654)
Q Consensus 427 ~L 428 (654)
.+
T Consensus 113 ~~ 114 (328)
T 1zyl_A 113 QF 114 (328)
T ss_dssp EC
T ss_pred CC
Confidence 43
No 422
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.46 E-value=0.00034 Score=70.72 Aligned_cols=70 Identities=9% Similarity=0.020 Sum_probs=42.5
Q ss_pred ccccccCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHhccCCCccc-cccEEEEeCCceEEEEEec-CCCch
Q 036334 352 EVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNVV-PLRAFYYSKDEKLLVYDYM-PAGSL 428 (654)
Q Consensus 352 ~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~hpniv-~l~~~~~~~~~~~lv~e~~-~~g~L 428 (654)
+.|+.|....+|+. ..+++|+.........+..+|+.+++.+....+. +++++ +.+.-++|+||+ ++.++
T Consensus 24 ~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~~l 95 (301)
T 3dxq_A 24 LERLGGLTNLVFRA-----GDLCLRIPGKGTEEYINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQTM 95 (301)
T ss_dssp EEEESCSSEEEEEE-----TTEEEEEECC----CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCEEC
T ss_pred eEcCCcccccccee-----eeEEEECCCCCccceeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCccC
Confidence 45788999999998 5688888764321112235577777666432333 44443 444567999999 55444
No 423
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.45 E-value=0.00084 Score=71.31 Aligned_cols=73 Identities=12% Similarity=0.143 Sum_probs=46.3
Q ss_pred CeecCCCCCCcEEECCCCCeEEeccCCCCCcCCCCCCCc-----cccccCccccCCC---CCCcchhHHHHHHHHHHHHh
Q 036334 467 KIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTR-----VAGYRAPEVVETR---KVTFKSDVYSFGVLLLELLT 538 (654)
Q Consensus 467 ~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~-----~~~y~aPE~~~~~---~~~~~~DvwslGvil~el~t 538 (654)
.++|+|+++.|||++.++ ++|+||+.+..-........ ...|++|+..... ......++......+|+.+.
T Consensus 233 ~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ 311 (420)
T 2pyw_A 233 ALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNLFN 311 (420)
T ss_dssp EEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHHHH
T ss_pred eEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHHHH
Confidence 499999999999999776 99999998765432111000 1226666654311 11223455677778888776
Q ss_pred CC
Q 036334 539 GK 540 (654)
Q Consensus 539 g~ 540 (654)
++
T Consensus 312 ~~ 313 (420)
T 2pyw_A 312 KR 313 (420)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 424
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.41 E-value=0.0019 Score=65.50 Aligned_cols=74 Identities=19% Similarity=0.133 Sum_probs=58.2
Q ss_pred ccccccCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHhccC---CCccccccEEEEeCCceEEEEEecCCCch
Q 036334 352 EVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIK---HDNVVPLRAFYYSKDEKLLVYDYMPAGSL 428 (654)
Q Consensus 352 ~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~---hpniv~l~~~~~~~~~~~lv~e~~~~g~L 428 (654)
+.|+.|.+..+|+.... +..+++|+.... ....+..|.+.|+.+. ...+.++++++...+..++||||+++..+
T Consensus 42 ~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~--~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~~ 118 (312)
T 3jr1_A 42 EKLYSGEMNEIWLINDE-VQTVFVKINERS--YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKN 118 (312)
T ss_dssp EEECCSSSSEEEEEESS-SCEEEEEEEEGG--GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCCC
T ss_pred EEeCCccceeeeEEEEC-CCeEEEEeCCcc--cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCCC
Confidence 35788999999998764 678889987543 3566888988888773 35677888888877889999999998764
No 425
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.29 E-value=0.00073 Score=67.75 Aligned_cols=73 Identities=19% Similarity=0.247 Sum_probs=52.7
Q ss_pred ccccccCceeEEEEEecCCcEEEEEEecccc-cCHHHHHHHHHHHhccCCC---ccccccEEEEeCCceEEEEEecCCCc
Q 036334 352 EVLGKGSVGTSYKAVLEEGTTVVVKRLKEVA-VGKREFEMQMEVLGKIKHD---NVVPLRAFYYSKDEKLLVYDYMPAGS 427 (654)
Q Consensus 352 ~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~-~~~~~~~~e~~~l~~l~hp---niv~l~~~~~~~~~~~lv~e~~~~g~ 427 (654)
+.+|.|..+.||+....+|+.|+||+..... .....|+.|+..|+.+.-. -+.+++++ +..++||||++++.
T Consensus 21 ~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~----~~~~lv~e~l~~~~ 96 (288)
T 3f7w_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW----DDRTLAMEWVDERP 96 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE----ETTEEEEECCCCCC
T ss_pred EecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec----cCceEEEEeecccC
Confidence 4589999999999999999999999875443 2345678899988877422 23344443 23578999998765
Q ss_pred h
Q 036334 428 L 428 (654)
Q Consensus 428 L 428 (654)
.
T Consensus 97 ~ 97 (288)
T 3f7w_A 97 P 97 (288)
T ss_dssp C
T ss_pred C
Confidence 3
No 426
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.25 E-value=6.1e-05 Score=69.10 Aligned_cols=85 Identities=11% Similarity=0.027 Sum_probs=65.7
Q ss_pred eEEEeecCCCCccccCCcccccCCCCccEEEeccCC-ccCcCCCCCCCc----cccccccccccc-cccccchhhccccc
Q 036334 69 FVYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNR-LSGEIPSDFSNL----TLLRSLYLQSNQ-FSGVFPASVTRMNR 142 (654)
Q Consensus 69 ~v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~Ls~N~-l~~~~p~~~~~l~~ 142 (654)
+++.|||+++.++..--. .+..+++|++|+|++|. |+..--..++.+ ++|++|+|+++. +|+.--..+.++++
T Consensus 62 ~L~~LDLs~~~Itd~GL~-~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFD-HMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CEEEEEEESCCCCGGGGG-GGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred eEeEEeCcCCCccHHHHH-HhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 599999999997654322 47899999999999985 764322235553 479999999974 88765567889999
Q ss_pred cceecccccc-cc
Q 036334 143 LTRLDLSSNN-FS 154 (654)
Q Consensus 143 L~~L~l~~N~-l~ 154 (654)
|++|+|+++. ++
T Consensus 141 L~~L~L~~c~~It 153 (176)
T 3e4g_A 141 LKYLFLSDLPGVK 153 (176)
T ss_dssp CCEEEEESCTTCC
T ss_pred CCEEECCCCCCCC
Confidence 9999999874 44
No 427
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.17 E-value=0.0022 Score=65.28 Aligned_cols=142 Identities=11% Similarity=0.176 Sum_probs=75.8
Q ss_pred ccccccCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHhccC-----CCcccccc-E--EEEeCCceEEEEEec
Q 036334 352 EVLGKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIK-----HDNVVPLR-A--FYYSKDEKLLVYDYM 423 (654)
Q Consensus 352 ~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~-----hpniv~l~-~--~~~~~~~~~lv~e~~ 423 (654)
+.|+.|....+|+....+| .+++|+.... ....++..|+.+++.+. -|.++... | +....+..+++|+|+
T Consensus 28 ~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~-~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~l 105 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTTKD-PLILTLYEKR-VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISFL 105 (322)
T ss_dssp EEECC---EEEEEEEESSC-CEEEEEECC----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEECC
T ss_pred eccCCCcccceEEEEeCCc-cEEEEEeCCC-CCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEeC
Confidence 3467788889999887655 6788987652 12345566777766653 23333211 1 112345678999999
Q ss_pred CCCchhh--------------hhccCC-CCCC---CCC---CHHHHHHH------------HHHHHHHHHHhhc------
Q 036334 424 PAGSLSA--------------LLHGSR-GSGR---TPL---DWDNRMRI------------ALSAARGLAHLHV------ 464 (654)
Q Consensus 424 ~~g~L~~--------------~l~~~~-~~~~---~~l---~~~~~~~i------------~~~ia~~l~~LH~------ 464 (654)
+|..+.. .+|... .... ... .|...+.- ...+...+++++.
T Consensus 106 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~~ 185 (322)
T 2ppq_A 106 EGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKDL 185 (322)
T ss_dssp CCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCSS
T ss_pred CCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCcccC
Confidence 8865321 112110 0000 001 23221110 0113334444431
Q ss_pred cCCeecCCCCCCcEEECCCCCeEEeccCCCC
Q 036334 465 SGKIVHGNIKASNILLRPDHDACVSDFGLNP 495 (654)
Q Consensus 465 ~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~ 495 (654)
...++|+|+++.||+++.++.+.|+||+.+.
T Consensus 186 ~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 186 PAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp CEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred CcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 1149999999999999977656899998654
No 428
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.11 E-value=0.0019 Score=67.32 Aligned_cols=140 Identities=16% Similarity=0.249 Sum_probs=80.5
Q ss_pred ccccccCceeEEEEEec--------CCcEEEEEEecccccCHHHHHHHHHHHhccCCCc-cccccEEEEeCCceEEEEEe
Q 036334 352 EVLGKGSVGTSYKAVLE--------EGTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDN-VVPLRAFYYSKDEKLLVYDY 422 (654)
Q Consensus 352 ~~lg~G~fg~Vy~~~~~--------~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~hpn-iv~l~~~~~~~~~~~lv~e~ 422 (654)
+.|..|-...+|+.... ++..+++|+............+|..+++.+.-.+ ..++++++.+ .+||||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e~ 131 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQY 131 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEEC
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEEE
Confidence 34666778889998864 2478999987443334556678988887774222 3456665533 399999
Q ss_pred cCCCchhhh-----------------hccCCCC-CCCCC-CHHHHHHHHHHHHH-------------------HHHHh--
Q 036334 423 MPAGSLSAL-----------------LHGSRGS-GRTPL-DWDNRMRIALSAAR-------------------GLAHL-- 462 (654)
Q Consensus 423 ~~~g~L~~~-----------------l~~~~~~-~~~~l-~~~~~~~i~~~ia~-------------------~l~~L-- 462 (654)
++|..|..- +|...-. ...+. -|.++.++..++.. .+..|
T Consensus 132 i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~ 211 (379)
T 3feg_A 132 IPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLRK 211 (379)
T ss_dssp CSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHHH
T ss_pred ecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHHH
Confidence 988655311 1211110 11111 24455555444321 12222
Q ss_pred --hcc---CCeecCCCCCCcEEECCC----CCeEEeccCCCC
Q 036334 463 --HVS---GKIVHGNIKASNILLRPD----HDACVSDFGLNP 495 (654)
Q Consensus 463 --H~~---~~ivHrDlk~~NIll~~~----~~~kl~Dfgla~ 495 (654)
... ..++|+|+.+.||+++.+ +.+.|+||..+.
T Consensus 212 ~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 212 LLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 211 149999999999999876 689999998765
No 429
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=96.98 E-value=0.0011 Score=69.76 Aligned_cols=112 Identities=11% Similarity=0.130 Sum_probs=80.0
Q ss_pred CcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccccccccchhhccccccceeccccccccccCCCccccc
Q 036334 85 PPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLDLSSNNFSGKIPFDVNNL 164 (654)
Q Consensus 85 ~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l 164 (654)
....|.+..+|+.+.+.++..+ .-...|.++++|+.+.+. +.++..-...|.++.+|+.++|..| ++..-...|.+|
T Consensus 257 ~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C 333 (394)
T 4gt6_A 257 ETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGC 333 (394)
T ss_dssp CTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTC
T ss_pred ccceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCC
Confidence 3446778888888888766544 445678888888888886 4566455667888888888888765 554556678888
Q ss_pred cccCccccccccccCCCCCC--CCCCCCeEEccCCccc
Q 036334 165 THLTGLFLENNKFSGNLPSI--NPANLRDFNVSNNNLN 200 (654)
Q Consensus 165 ~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~ 200 (654)
.+|+.+.|..+ ++..-... ++.+|+.+++.+|...
T Consensus 334 ~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~ 370 (394)
T 4gt6_A 334 EQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQ 370 (394)
T ss_dssp TTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHH
T ss_pred CCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceee
Confidence 88888888654 54333322 7888888888877543
No 430
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=96.98 E-value=0.00065 Score=71.50 Aligned_cols=125 Identities=14% Similarity=0.215 Sum_probs=85.0
Q ss_pred EEEeecCCCCccccCCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccccccccchhhccccccceeccc
Q 036334 70 VYSLRLPGVGLVGPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLDLS 149 (654)
Q Consensus 70 v~~L~l~~~~l~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 149 (654)
++.+.+..+-. .+....|.+++.|+.+.+. +.++..-...|.++.+|+.++|..| ++..-..+|.++++|+.+.|.
T Consensus 267 L~~i~lp~~~~--~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip 342 (394)
T 4gt6_A 267 LASVKMPDSVV--SIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIP 342 (394)
T ss_dssp CCEEECCTTCC--EECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEC
T ss_pred ccEEecccccc--eecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEEC
Confidence 34444443322 3556678899999999996 5566455568999999999999865 665667789999999999997
Q ss_pred cccccccCCCccccccccCccccccccccCCCCCCCCCCCCeEEccCCccc
Q 036334 150 SNNFSGKIPFDVNNLTHLTGLFLENNKFSGNLPSINPANLRDFNVSNNNLN 200 (654)
Q Consensus 150 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~ 200 (654)
.| ++..-...|.+|++|+.+++.+|.... -....+.+|+.|.+..|.+.
T Consensus 343 ~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~-~~~~~~~~L~~i~i~~~~~~ 391 (394)
T 4gt6_A 343 SS-VTKIPESAFSNCTALNNIEYSGSRSQW-NAISTDSGLQNLPVAPGSID 391 (394)
T ss_dssp TT-CCBCCGGGGTTCTTCCEEEESSCHHHH-HTCBCCCCC-----------
T ss_pred cc-cCEEhHhHhhCCCCCCEEEECCceeeh-hhhhccCCCCEEEeCCCCEE
Confidence 65 664556789999999999999886542 11226778888888777653
No 431
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.93 E-value=0.0043 Score=63.41 Aligned_cols=30 Identities=33% Similarity=0.451 Sum_probs=26.1
Q ss_pred CeecCCCCCCcEEECCC----CCeEEeccCCCCC
Q 036334 467 KIVHGNIKASNILLRPD----HDACVSDFGLNPL 496 (654)
Q Consensus 467 ~ivHrDlk~~NIll~~~----~~~kl~Dfgla~~ 496 (654)
.++|+|+.+.|||++.+ +.+.|+||+.+..
T Consensus 184 ~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 184 VFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp EEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred eeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 49999999999999875 6789999998764
No 432
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.93 E-value=5.3e-05 Score=70.87 Aligned_cols=111 Identities=12% Similarity=0.109 Sum_probs=63.0
Q ss_pred ccCCCCccEEEeccC-CccC----cCCCCCCCcccccccccccccccccc----chhhccccccceecccccccccc---
Q 036334 89 LGKLSQLRVLSLRSN-RLSG----EIPSDFSNLTLLRSLYLQSNQFSGVF----PASVTRMNRLTRLDLSSNNFSGK--- 156 (654)
Q Consensus 89 l~~l~~L~~L~Ls~N-~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~----p~~~~~l~~L~~L~l~~N~l~~~--- 156 (654)
+.+-+.|+.|+|++| .|.. .+-..+..-+.|+.|+|++|+|...- -..+..-+.|+.|+|++|.|...
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ 116 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLA 116 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHH
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHH
Confidence 445567788888775 6652 12334455567788888888877442 23344456778888888877632
Q ss_pred -CCCccccccccCccccccc---cccCC----CCCC--CCCCCCeEEccCCcc
Q 036334 157 -IPFDVNNLTHLTGLFLENN---KFSGN----LPSI--NPANLRDFNVSNNNL 199 (654)
Q Consensus 157 -~p~~~~~l~~L~~L~l~~N---~l~~~----~~~~--~~~~L~~L~l~~N~l 199 (654)
+-..+..-+.|+.|+|++| .|... +... .-+.|+.|+|+.|.+
T Consensus 117 ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 117 RLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 1223333455777777654 22211 1111 335667777766654
No 433
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=96.91 E-value=0.0017 Score=67.81 Aligned_cols=122 Identities=11% Similarity=0.136 Sum_probs=68.1
Q ss_pred cccCCCCccEEEeccCCccCcCCCCCCCccccccccccccccccccchhhccccccceeccccccccccCCCcccccccc
Q 036334 88 TLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLDLSSNNFSGKIPFDVNNLTHL 167 (654)
Q Consensus 88 ~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L 167 (654)
.+....+|+.+.+..+ +...-...|.++..|+.+.+..+ ++..-...|.++.+|+.+.+..+ ++..-...|.++++|
T Consensus 212 ~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L 288 (379)
T 4h09_A 212 GFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNL 288 (379)
T ss_dssp TTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTC
T ss_pred ccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccccc
Confidence 4555666666666544 33234445666667777766655 44344555666666777666543 443334456666777
Q ss_pred CccccccccccCCCCCC--CCCCCCeEEccCCcccccCcccccCCCCc
Q 036334 168 TGLFLENNKFSGNLPSI--NPANLRDFNVSNNNLNGSIPATLSKFPQS 213 (654)
Q Consensus 168 ~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~g~~p~~~~~~~~l 213 (654)
+.+.+.+|.++...... .+.+|+.++|.+| ++..-..+|.++.+|
T Consensus 289 ~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L 335 (379)
T 4h09_A 289 TKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKAL 335 (379)
T ss_dssp CEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTC
T ss_pred ccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCC
Confidence 77777666665444333 5666777766543 442222345544433
No 434
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.90 E-value=0.0031 Score=67.00 Aligned_cols=72 Identities=11% Similarity=0.183 Sum_probs=48.0
Q ss_pred ccccccCceeEEEEEecC--------CcEEEEEEecccccCHHHHHHHHHHHhccCCCcc-ccccEEEEeCCceEEEEEe
Q 036334 352 EVLGKGSVGTSYKAVLEE--------GTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNV-VPLRAFYYSKDEKLLVYDY 422 (654)
Q Consensus 352 ~~lg~G~fg~Vy~~~~~~--------g~~vavK~~~~~~~~~~~~~~e~~~l~~l~hpni-v~l~~~~~~~~~~~lv~e~ 422 (654)
+.|+.|....+|+....+ +..+++|+.... .....+..|..+++.+...++ .++++.+.+ .+|+||
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~-~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e~ 153 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP-ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEEY 153 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC-CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEECC
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC-CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEEE
Confidence 357788889999998653 478999998432 122455678888887753333 456665432 389999
Q ss_pred cCCCch
Q 036334 423 MPAGSL 428 (654)
Q Consensus 423 ~~~g~L 428 (654)
++|-.+
T Consensus 154 l~G~~l 159 (429)
T 1nw1_A 154 IPSRPL 159 (429)
T ss_dssp CCEEEC
T ss_pred eCCccc
Confidence 986444
No 435
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.88 E-value=0.0022 Score=66.79 Aligned_cols=73 Identities=12% Similarity=0.121 Sum_probs=42.8
Q ss_pred ccccccCceeEEEEEecC---------CcEEEEEEecccccCHHHHHHHHHHHhccCCCcc-ccccEEEEeCCceEEEEE
Q 036334 352 EVLGKGSVGTSYKAVLEE---------GTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNV-VPLRAFYYSKDEKLLVYD 421 (654)
Q Consensus 352 ~~lg~G~fg~Vy~~~~~~---------g~~vavK~~~~~~~~~~~~~~e~~~l~~l~hpni-v~l~~~~~~~~~~~lv~e 421 (654)
+.|+.|....+|+....+ +..+++|+.........+...|..+++.+...++ .++++.+ . -++|||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v~e 114 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRIEE 114 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccceecHHHHHHHHHHHHhcCCCCceEEec--C--CcEEEE
Confidence 347778888999988653 2688888875432211123567777777643333 3565543 2 378999
Q ss_pred ecCCCch
Q 036334 422 YMPAGSL 428 (654)
Q Consensus 422 ~~~~g~L 428 (654)
|++|..+
T Consensus 115 ~i~G~~l 121 (369)
T 3c5i_A 115 WLYGDPL 121 (369)
T ss_dssp CCCSEEC
T ss_pred EecCCcC
Confidence 9987543
No 436
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=96.87 E-value=0.0017 Score=68.32 Aligned_cols=83 Identities=12% Similarity=0.068 Sum_probs=43.2
Q ss_pred CCCCccccccccccccccccccchhhccccccceeccccccccccCCCccccccccCccccccccccCCCCCC--CCCCC
Q 036334 112 DFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLDLSSNNFSGKIPFDVNNLTHLTGLFLENNKFSGNLPSI--NPANL 189 (654)
Q Consensus 112 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L 189 (654)
.|..+.+|+.+.+.++ ++..-..+|.++++|+.++|.++ ++..-...|.+|++|+.+++..| ++...... .+.+|
T Consensus 292 ~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L 368 (394)
T 4fs7_A 292 TFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINL 368 (394)
T ss_dssp TTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTC
T ss_pred cccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCC
Confidence 3455555555555543 44333445566666666666533 44333445666666666666554 43322222 55666
Q ss_pred CeEEccCC
Q 036334 190 RDFNVSNN 197 (654)
Q Consensus 190 ~~L~l~~N 197 (654)
+.++|..|
T Consensus 369 ~~i~lp~~ 376 (394)
T 4fs7_A 369 KKVELPKR 376 (394)
T ss_dssp CEEEEEGG
T ss_pred CEEEECCC
Confidence 66666443
No 437
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.80 E-value=0.014 Score=54.80 Aligned_cols=101 Identities=13% Similarity=0.088 Sum_probs=66.9
Q ss_pred chhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhh-ccCCeecCCCCCCcEEECCCCCeEEeccCCCCCcCCCCCCCc
Q 036334 427 SLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLH-VSGKIVHGNIKASNILLRPDHDACVSDFGLNPLFGNTTPPTR 505 (654)
Q Consensus 427 ~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH-~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~ 505 (654)
+|.++|... ..+++++++|.++.|.+++|.-+- .+. -..+=+.|..|++..+|.|.+.+ +.+. ..
T Consensus 34 SL~eIL~~~----~~PlsEEqaWALc~Qc~~~L~~~~~~~~-~~~~i~~~~~i~l~~dG~V~f~~-~~s~--------~~ 99 (229)
T 2yle_A 34 SLEEILRLY----NQPINEEQAWAVCYQCCGSLRAAARRRQ-PRHRVRSAAQIRVWRDGAVTLAP-AADD--------AG 99 (229)
T ss_dssp EHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHHTTC-CCCCCCSGGGEEEETTSCEEECC-C-------------
T ss_pred cHHHHHHHc----CCCcCHHHHHHHHHHHHHHHHhhhhccc-CCceecCCcceEEecCCceeccc-cccc--------cc
Confidence 788888743 468999999999999999987762 111 11233457899999999998874 1111 11
Q ss_pred cccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCC
Q 036334 506 VAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAP 542 (654)
Q Consensus 506 ~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p 542 (654)
...+.|||... ...+.+.=|||+|+++|.-+--..|
T Consensus 100 ~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 100 EPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp -------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred ccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 22377888763 4567889999999999998864433
No 438
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.78 E-value=0.0011 Score=57.72 Aligned_cols=56 Identities=23% Similarity=0.300 Sum_probs=32.5
Q ss_pred EeecCCCCcc-ccCCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccccc
Q 036334 72 SLRLPGVGLV-GPIPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFS 130 (654)
Q Consensus 72 ~L~l~~~~l~-~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 130 (654)
.++.++++|+ ..+|.. + -++|++|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~-l--p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTA-F--PVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSC-C--CTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCC-C--CcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4566666664 244432 1 134677777777777544445666666666666666554
No 439
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.75 E-value=0.00081 Score=58.61 Aligned_cols=56 Identities=18% Similarity=0.344 Sum_probs=34.0
Q ss_pred EEEeccCCcc-CcCCCCCCCccccccccccccccccccchhhccccccceecccccccc
Q 036334 97 VLSLRSNRLS-GEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLDLSSNNFS 154 (654)
Q Consensus 97 ~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 154 (654)
.++.++++|+ ..+|..+. ++|+.|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 5677777775 34554332 35666777777776555555666666666666666543
No 440
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.61 E-value=0.00015 Score=67.86 Aligned_cols=110 Identities=9% Similarity=0.117 Sum_probs=76.4
Q ss_pred CeEEEeecCCC-Ccccc----CCcccccCCCCccEEEeccCCccCcCCCC----CCCccccccccccccccccc----cc
Q 036334 68 SFVYSLRLPGV-GLVGP----IPPNTLGKLSQLRVLSLRSNRLSGEIPSD----FSNLTLLRSLYLQSNQFSGV----FP 134 (654)
Q Consensus 68 ~~v~~L~l~~~-~l~~~----~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~----~~~l~~L~~L~Ls~N~l~~~----~p 134 (654)
..++.|+|+++ ++... +- +.|..-+.|+.|+|++|.|...--.. +..-+.|+.|+|++|+|++. +-
T Consensus 41 ~~L~~L~L~~nn~igd~ga~~la-~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala 119 (197)
T 1pgv_A 41 TDLKEVNINNMKRVSKERIRSLI-EAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLL 119 (197)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHH-HHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHH
T ss_pred CCccEEECCCCCCCCHHHHHHHH-HHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHH
Confidence 44899999986 66421 22 24667789999999999998433333 34457899999999999964 33
Q ss_pred hhhccccccceecccccc---ccc----cCCCccccccccCcccccccccc
Q 036334 135 ASVTRMNRLTRLDLSSNN---FSG----KIPFDVNNLTHLTGLFLENNKFS 178 (654)
Q Consensus 135 ~~~~~l~~L~~L~l~~N~---l~~----~~p~~~~~l~~L~~L~l~~N~l~ 178 (654)
..+..-+.|+.|+|++|. |.. .+-..+..-+.|+.|+++.|.+.
T Consensus 120 ~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 120 RSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred HHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 345556789999998763 332 12334555578999999887654
No 441
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=96.55 E-value=0.0023 Score=67.22 Aligned_cols=89 Identities=16% Similarity=0.088 Sum_probs=72.6
Q ss_pred CCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccccccccchhhccccccceeccccccccccCCCcccc
Q 036334 84 IPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLDLSSNNFSGKIPFDVNN 163 (654)
Q Consensus 84 ~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~ 163 (654)
++...|....+|+.+.+.++ ++..-...|.++++|+.++|.++ ++..-..+|.++++|+.++|..| ++..-...|.+
T Consensus 288 i~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~ 364 (394)
T 4fs7_A 288 VPEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQG 364 (394)
T ss_dssp ECTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTT
T ss_pred eccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhC
Confidence 44456778889999999765 66455668999999999999855 77566788999999999999887 77566678999
Q ss_pred ccccCccccccc
Q 036334 164 LTHLTGLFLENN 175 (654)
Q Consensus 164 l~~L~~L~l~~N 175 (654)
|++|+.+++..|
T Consensus 365 C~~L~~i~lp~~ 376 (394)
T 4fs7_A 365 CINLKKVELPKR 376 (394)
T ss_dssp CTTCCEEEEEGG
T ss_pred CCCCCEEEECCC
Confidence 999999999765
No 442
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.46 E-value=0.016 Score=61.96 Aligned_cols=73 Identities=10% Similarity=0.107 Sum_probs=46.6
Q ss_pred ccccccCceeEEEEEecC-CcEEEEEEecccccCHHHHHHHHHHHhccCCCcc-ccccEEEEeCCceEEEEEecCCCch
Q 036334 352 EVLGKGSVGTSYKAVLEE-GTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDNV-VPLRAFYYSKDEKLLVYDYMPAGSL 428 (654)
Q Consensus 352 ~~lg~G~fg~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~e~~~l~~l~hpni-v~l~~~~~~~~~~~lv~e~~~~g~L 428 (654)
+.|+.|-...+|+....+ +..+++|+........-+..+|..+++.+...++ .++++++. + .+||||+++..|
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~l 188 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYAL 188 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEEC
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCccC
Confidence 357788889999998764 4788899875432111123578888888865555 45666652 2 359999987554
No 443
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=96.28 E-value=0.011 Score=61.55 Aligned_cols=111 Identities=13% Similarity=0.097 Sum_probs=77.4
Q ss_pred CCcccccCCCCccEEEeccCCccCcCCCCCCCccccccccccccccccccchhhccccccceeccccccccccCCCcccc
Q 036334 84 IPPNTLGKLSQLRVLSLRSNRLSGEIPSDFSNLTLLRSLYLQSNQFSGVFPASVTRMNRLTRLDLSSNNFSGKIPFDVNN 163 (654)
Q Consensus 84 ~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~ 163 (654)
+....+.+...|+.+.+..+ ++..-...|.++.+|+.+.+..+ ++..-...|.++++|+.+.+.+|.++..-...|.+
T Consensus 231 i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~ 308 (379)
T 4h09_A 231 LGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMD 308 (379)
T ss_dssp ECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTT
T ss_pred EccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcC
Confidence 34445777788888888766 55344557888888888888654 55455567788888888888888887555667888
Q ss_pred ccccCccccccccccCCCCCC--CCCCCCeEEccCC
Q 036334 164 LTHLTGLFLENNKFSGNLPSI--NPANLRDFNVSNN 197 (654)
Q Consensus 164 l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N 197 (654)
|.+|+.+.|.++ ++..-... ++.+|+.+.+..|
T Consensus 309 c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~ 343 (379)
T 4h09_A 309 CVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS 343 (379)
T ss_dssp CTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT
T ss_pred CCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc
Confidence 888888888654 44333322 6778888766443
No 444
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=95.89 E-value=0.07 Score=54.54 Aligned_cols=68 Identities=15% Similarity=0.164 Sum_probs=42.9
Q ss_pred cccCceeEEEEEecCCcEEEEEEecccccCHHHHHHHHHHHhccC---CCccccccEE------EEeCCceEEEEEecCC
Q 036334 355 GKGSVGTSYKAVLEEGTTVVVKRLKEVAVGKREFEMQMEVLGKIK---HDNVVPLRAF------YYSKDEKLLVYDYMPA 425 (654)
Q Consensus 355 g~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~e~~~l~~l~---hpniv~l~~~------~~~~~~~~lv~e~~~~ 425 (654)
|.|....||+....+| .+++|+...... ..|+.+++.+. -|++.+.+.. ....+..++||+|++|
T Consensus 32 G~g~~N~vy~v~~~~g-~~vLK~~~~~~~-----~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~G 105 (339)
T 3i1a_A 32 GADTNAFAYQADSESK-SYFIKLKYGYHD-----EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIHA 105 (339)
T ss_dssp TSCSSCEEEEEECSSC-EEEEEEEECSSC-----CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCCC
T ss_pred cCccccceEEEEeCCC-CEEEEEecCccc-----hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccCC
Confidence 4444689999987767 899998765432 34555554442 2224444432 2334667999999998
Q ss_pred Cch
Q 036334 426 GSL 428 (654)
Q Consensus 426 g~L 428 (654)
..+
T Consensus 106 ~~~ 108 (339)
T 3i1a_A 106 PNG 108 (339)
T ss_dssp CBT
T ss_pred CcC
Confidence 765
No 445
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.94 E-value=0.13 Score=54.28 Aligned_cols=72 Identities=7% Similarity=0.099 Sum_probs=45.4
Q ss_pred cccccCceeEEEEEecC--------CcEEEEEEecccccCHHHHHHHHHHHhccCCCc-cccccEEEEeCCceEEEEEec
Q 036334 353 VLGKGSVGTSYKAVLEE--------GTTVVVKRLKEVAVGKREFEMQMEVLGKIKHDN-VVPLRAFYYSKDEKLLVYDYM 423 (654)
Q Consensus 353 ~lg~G~fg~Vy~~~~~~--------g~~vavK~~~~~~~~~~~~~~e~~~l~~l~hpn-iv~l~~~~~~~~~~~lv~e~~ 423 (654)
.+..|-...+|+....+ +..+++++........-+.++|..+++.+.-.+ ..++++.+ . -++||||+
T Consensus 77 ~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~idR~~E~~~l~~L~~~gi~P~l~~~~--~--~~~I~efI 152 (424)
T 3mes_A 77 QIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFYDSKVELDVFRYLSNINIAPNIIADF--P--EGRIEEFI 152 (424)
T ss_dssp EECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CCCCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEEECC
T ss_pred EcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchhcCHHHHHHHHHHHHhcCCCCCEEEEc--C--CCEEEEEe
Confidence 46667778899988653 578999986543222223356777777764223 33455433 2 37899999
Q ss_pred CCCch
Q 036334 424 PAGSL 428 (654)
Q Consensus 424 ~~g~L 428 (654)
+|..|
T Consensus 153 ~G~~l 157 (424)
T 3mes_A 153 DGEPL 157 (424)
T ss_dssp CSEEC
T ss_pred CCccC
Confidence 98664
No 446
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=94.03 E-value=0.2 Score=52.21 Aligned_cols=29 Identities=24% Similarity=0.389 Sum_probs=25.7
Q ss_pred CeecCCCCCCcEEECCC------CCeEEeccCCCC
Q 036334 467 KIVHGNIKASNILLRPD------HDACVSDFGLNP 495 (654)
Q Consensus 467 ~ivHrDlk~~NIll~~~------~~~kl~Dfgla~ 495 (654)
.++|+|+.+.||+++.+ +.+.++||..+.
T Consensus 245 v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred eEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 48999999999999887 789999998764
No 447
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=93.07 E-value=0.058 Score=36.35 Aligned_cols=28 Identities=18% Similarity=0.379 Sum_probs=12.8
Q ss_pred eeeeeehhhHHHHHHHHHHHHHHhhccc
Q 036334 260 AIVGIAVGGAVFIVLLLLLLLFCLKKRR 287 (654)
Q Consensus 260 ~ii~~~i~~~~~~~l~~~~~~~~~~~rr 287 (654)
.|++.++|+++++++++++++++.|+|+
T Consensus 12 ~IA~gVVgGv~~~~ii~~~~~~~~RRr~ 39 (44)
T 2ks1_B 12 SIATGMVGALLLLLVVALGIGLFMRRRH 39 (44)
T ss_dssp SSTHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred eEEeehhHHHHHHHHHHHHHHHHhhhhH
Confidence 3444455555544444444444444433
No 448
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=92.78 E-value=0.058 Score=36.26 Aligned_cols=29 Identities=17% Similarity=0.400 Sum_probs=13.6
Q ss_pred ceeeeeehhhHHHHHHHHHHHHHHhhccc
Q 036334 259 AAIVGIAVGGAVFIVLLLLLLLFCLKKRR 287 (654)
Q Consensus 259 ~~ii~~~i~~~~~~~l~~~~~~~~~~~rr 287 (654)
..|++.++|++++++++++.++++.|+|+
T Consensus 10 ~aIA~gVVgGv~~v~ii~~~~~~~~RRRr 38 (44)
T 2l2t_A 10 PLIAAGVIGGLFILVIVGLTFAVYVRRKS 38 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred ceEEEeehHHHHHHHHHHHHHHHHhhhhh
Confidence 34555555555554444444444444433
No 449
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=91.68 E-value=0.068 Score=34.87 Aligned_cols=30 Identities=30% Similarity=0.363 Sum_probs=18.6
Q ss_pred CcccceeeeeehhhHHHHHHHHHHHHHHhh
Q 036334 255 KLSTAAIVGIAVGGAVFIVLLLLLLLFCLK 284 (654)
Q Consensus 255 ~~~~~~ii~~~i~~~~~~~l~~~~~~~~~~ 284 (654)
.++.+.+.++++|.++.+.+++++.+|++|
T Consensus 7 ~ls~GaIAGiVvG~v~gv~li~~l~~~~~r 36 (38)
T 2k1k_A 7 GLTGGEIVAVIFGLLLGAALLLGILVFRSR 36 (38)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCceeeeehHHHHHHHHHHHHHHHHee
Confidence 455677778887776666655555444443
No 450
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=89.30 E-value=0.84 Score=47.56 Aligned_cols=28 Identities=25% Similarity=0.451 Sum_probs=24.0
Q ss_pred eecCCCCCCcEEE------CCCCCeEEeccCCCC
Q 036334 468 IVHGNIKASNILL------RPDHDACVSDFGLNP 495 (654)
Q Consensus 468 ivHrDlk~~NIll------~~~~~~kl~Dfgla~ 495 (654)
++|+|+.+.||++ +++..++++||..|.
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~ 279 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence 6799999999999 445679999998765
No 451
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=88.82 E-value=2 Score=40.20 Aligned_cols=115 Identities=10% Similarity=0.091 Sum_probs=77.5
Q ss_pred CCCccccccEEEEeCCceEEEEEecCCC-chhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHhhccCCeecCCCCCCc
Q 036334 399 KHDNVVPLRAFYYSKDEKLLVYDYMPAG-SLSALLHGSRGSGRTPLDWDNRMRIALSAARGLAHLHVSGKIVHGNIKASN 477 (654)
Q Consensus 399 ~hpniv~l~~~~~~~~~~~lv~e~~~~g-~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~ivHrDlk~~N 477 (654)
.||+.+.. .+-.+.+.+.+.++.-+.+ ++.. ++ .++...+++++.+|+....+++. -+|--+.|+|
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-ik--------~~~~~eKlr~l~ni~~l~~~~~~---r~tf~L~P~N 109 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-IK--------SFTKNEKLRYLLNIKNLEEVNRT---RYTFVLAPDE 109 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-GG--------GSCHHHHHHHHHHGGGGGGGGGS---SEECCCSGGG
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-HH--------hcCHHHHHHHHHHHHHHHHHhcC---ceEEEEecce
Confidence 58888765 4555566666666654322 2222 32 37889999999999988866653 3688899999
Q ss_pred EEECCCCCeEEeccCCCCCcCCCCCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCC
Q 036334 478 ILLRPDHDACVSDFGLNPLFGNTTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQ 544 (654)
Q Consensus 478 Ill~~~~~~kl~Dfgla~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~ 544 (654)
|+++.++.+++.-.|+...+ +|.. .++..=.-.+=+++..+++++..|.
T Consensus 110 L~f~~~~~p~i~~RGik~~l-------------~P~~-----~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 110 LFFTRDGLPIAKTRGLQNVV-------------DPLP-----VSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp EEECTTSCEEESCCEETTTB-------------SCCC-----CCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred EEEcCCCCEEEEEccCccCC-------------CCCC-----CCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 99999999999877764332 2221 1112223347788888999988875
No 452
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=88.10 E-value=0.24 Score=33.22 Aligned_cols=7 Identities=43% Similarity=0.800 Sum_probs=3.2
Q ss_pred eeeeehh
Q 036334 261 IVGIAVG 267 (654)
Q Consensus 261 ii~~~i~ 267 (654)
+++.++|
T Consensus 14 Ia~~vVG 20 (44)
T 2jwa_A 14 IISAVVG 20 (44)
T ss_dssp HHHHHHH
T ss_pred hHHHHHH
Confidence 4444444
No 453
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=83.26 E-value=4.1 Score=38.16 Aligned_cols=115 Identities=14% Similarity=0.079 Sum_probs=77.5
Q ss_pred CCCccccccEEEEeCCceEEEEEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHH-HhhccCCeecCCCCCCc
Q 036334 399 KHDNVVPLRAFYYSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAARGLA-HLHVSGKIVHGNIKASN 477 (654)
Q Consensus 399 ~hpniv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~l~-~LH~~~~ivHrDlk~~N 477 (654)
.||+. -...-.+++.+.+.++.-+++.=...++ .++...+++++.+|+.... +++. -+|--+.|+|
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~--------~~~~~eKlrll~nl~~L~~~~~~~---r~tf~l~P~N 114 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR--------KTTLLSRIRAAIHLVSKVKHHSAR---RLIFIVCPEN 114 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH--------TSCHHHHHHHHHHHHHHHSSCCSS---SEECCCCGGG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH--------hcCHHHHHHHHHHHHHHHHHhhhC---ceeEEEeCce
Confidence 57777 3334456677777777654443333443 2788999999999998887 6653 4688899999
Q ss_pred EEECCCCCeEEeccCCCCCcCCCCCCCccccccCccccCCCCCCcchhHHHHHHHHHHHHhCCCCCC
Q 036334 478 ILLRPDHDACVSDFGLNPLFGNTTPPTRVAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQ 544 (654)
Q Consensus 478 Ill~~~~~~kl~Dfgla~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~ 544 (654)
|+++.++.+++.-.|+-.. ++|..+ ++.-=.-.+=+++..++.++..|.
T Consensus 115 L~f~~~~~p~i~hRGi~~~-------------lpP~e~-----~ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 115 LMFNRALEPFFLHVGVKES-------------LPPDEW-----DDERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp EEECTTCCEEESCCEETTT-------------BSSCSC-----CHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred EEEeCCCcEEEEEcCCccc-------------CCCCCC-----CHHHHHHHHHHHHHHHHcCCCCHH
Confidence 9999999999987776432 333322 111112246677888888877764
No 454
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=77.86 E-value=0.33 Score=51.71 Aligned_cols=58 Identities=10% Similarity=0.026 Sum_probs=17.1
Q ss_pred ccccccCceeEEEEEecC-CcEEEE------EEecccccC---HHHHHHHHHHHhccCCCccccccEEEEe
Q 036334 352 EVLGKGSVGTSYKAVLEE-GTTVVV------KRLKEVAVG---KREFEMQMEVLGKIKHDNVVPLRAFYYS 412 (654)
Q Consensus 352 ~~lg~G~fg~Vy~~~~~~-g~~vav------K~~~~~~~~---~~~~~~e~~~l~~l~hpniv~l~~~~~~ 412 (654)
+.|| ||.||+|.+.. ..+||| |..+..... ...+.+|..+++..+|||+++.+++...
T Consensus 148 ~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 148 EHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp TTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred ccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 4566 99999999764 367888 766543322 2357778888888999999999887653
No 455
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=71.24 E-value=3.4 Score=29.97 Aligned_cols=18 Identities=33% Similarity=0.602 Sum_probs=11.0
Q ss_pred eehhhHHHHHHHHHHHHH
Q 036334 264 IAVGGAVFIVLLLLLLLF 281 (654)
Q Consensus 264 ~~i~~~~~~~l~~~~~~~ 281 (654)
+++|+++.+++++.++++
T Consensus 12 ivlGg~~~lll~~glcI~ 29 (70)
T 2klu_A 12 IVLGGVAGLLLFIGLGIF 29 (70)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHH
Confidence 466776666666555554
No 456
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=65.78 E-value=4.3 Score=28.43 Aligned_cols=26 Identities=27% Similarity=0.313 Sum_probs=15.5
Q ss_pred ccceeeeeehhhHHHHHHHHHHHHHH
Q 036334 257 STAAIVGIAVGGAVFIVLLLLLLLFC 282 (654)
Q Consensus 257 ~~~~ii~~~i~~~~~~~l~~~~~~~~ 282 (654)
..++++++++++.+++.+++++++-|
T Consensus 8 p~WiIi~svl~GLLLL~Lii~~LwK~ 33 (54)
T 2l8s_A 8 PLWVILLSAFAGLLLLMLLILALWKI 33 (54)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 35666766777666666555554433
No 457
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=63.92 E-value=1.4 Score=29.10 Aligned_cols=10 Identities=30% Similarity=0.474 Sum_probs=3.7
Q ss_pred eeeehhhHHH
Q 036334 262 VGIAVGGAVF 271 (654)
Q Consensus 262 i~~~i~~~~~ 271 (654)
++.+++++++
T Consensus 16 ~~~vv~Gv~l 25 (41)
T 2k9y_A 16 IGGVAVGVVL 25 (41)
T ss_dssp HHHHHHHHHH
T ss_pred EeehhHHHHH
Confidence 3333333333
No 458
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=63.49 E-value=5.6 Score=27.96 Aligned_cols=26 Identities=15% Similarity=0.263 Sum_probs=15.5
Q ss_pred ccceeeeeehhhHHHHHHHHHHHHHH
Q 036334 257 STAAIVGIAVGGAVFIVLLLLLLLFC 282 (654)
Q Consensus 257 ~~~~ii~~~i~~~~~~~l~~~~~~~~ 282 (654)
..++++++++++.+++.+++++++-|
T Consensus 11 p~wiIi~svl~GLllL~li~~~LwK~ 36 (54)
T 2knc_A 11 PIWWVLVGVLGGLLLLTILVLAMWKV 36 (54)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 45666666777666666555554433
No 459
>2l34_A TYRO protein tyrosine kinase-binding protein; immunoreceptor, transmembrane assembly, DAP12, protein bindi; NMR {Homo sapiens} PDB: 2l35_B
Probab=42.50 E-value=8 Score=24.17 Aligned_cols=26 Identities=38% Similarity=0.632 Sum_probs=14.0
Q ss_pred ccceeeeeehhhHHHHHHHHHHHHHH
Q 036334 257 STAAIVGIAVGGAVFIVLLLLLLLFC 282 (654)
Q Consensus 257 ~~~~ii~~~i~~~~~~~l~~~~~~~~ 282 (654)
+.+.+.|++++-++..+++++.++++
T Consensus 5 ~~gaIaGIVvgdi~~t~~i~~~vy~~ 30 (33)
T 2l34_A 5 SPGVLAGIVVGDLVLTVLIALAVYFL 30 (33)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcceEEeEeHHHHHHHHHHHHHHhhe
Confidence 34556666666655555544444443
No 460
>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment, alternative splicing, calcium, cell adhesion, cleavage on PAIR of basic residues; NMR {Homo sapiens} PDB: 2k9j_A
Probab=42.32 E-value=12 Score=24.84 Aligned_cols=24 Identities=17% Similarity=0.331 Sum_probs=13.4
Q ss_pred ccceeeeeehhhHHHHHHHHHHHH
Q 036334 257 STAAIVGIAVGGAVFIVLLLLLLL 280 (654)
Q Consensus 257 ~~~~ii~~~i~~~~~~~l~~~~~~ 280 (654)
..++++.+++++.+++.+++++++
T Consensus 9 p~wiIi~s~l~GLllL~li~~~Lw 32 (42)
T 2k1a_A 9 PIWWVLVGVLGGLLLLTILVLAMW 32 (42)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHH
Confidence 346666666666555555544444
No 461
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=39.65 E-value=42 Score=26.83 Aligned_cols=14 Identities=7% Similarity=0.247 Sum_probs=5.7
Q ss_pred cccCCCCccEEEec
Q 036334 88 TLGKLSQLRVLSLR 101 (654)
Q Consensus 88 ~l~~l~~L~~L~Ls 101 (654)
.|.+.++|+.+.|-
T Consensus 15 aF~~c~~L~~i~iP 28 (100)
T 2lz0_A 15 LFAGNTVIREITVQ 28 (100)
T ss_dssp TTTTCTTCCCEEEC
T ss_pred HhcCCCCCcEEEcC
Confidence 34444444444443
No 462
>2jo1_A Phospholemman; FXYD1, Na,K-ATPase, micelle, hydrolase regulator; NMR {Homo sapiens}
Probab=38.21 E-value=23 Score=26.07 Aligned_cols=20 Identities=35% Similarity=0.718 Sum_probs=8.8
Q ss_pred eeeeehhhHHHHHHHHHHHH
Q 036334 261 IVGIAVGGAVFIVLLLLLLL 280 (654)
Q Consensus 261 ii~~~i~~~~~~~l~~~~~~ 280 (654)
+.|.+++++++++.+++++.
T Consensus 18 iGGLifA~vLfi~GI~iilS 37 (72)
T 2jo1_A 18 IGGLVIAGILFILGILIVLS 37 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHHc
Confidence 44444544444444444333
No 463
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=35.17 E-value=12 Score=27.19 Aligned_cols=28 Identities=25% Similarity=0.363 Sum_probs=14.7
Q ss_pred eeeeeehhhHHHHHHHHHHHHHHhhccc
Q 036334 260 AIVGIAVGGAVFIVLLLLLLLFCLKKRR 287 (654)
Q Consensus 260 ~ii~~~i~~~~~~~l~~~~~~~~~~~rr 287 (654)
+++|.+++.+++..+.+++.+-|+++||
T Consensus 12 ivlGg~~~lll~~glcI~ccvkcrhRrr 39 (70)
T 2klu_A 12 IVLGGVAGLLLFIGLGIFFSVRSRHRRR 39 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSCCSS
T ss_pred HHHhHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 4566666555555555554554544333
No 464
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=34.23 E-value=3.5e+02 Score=29.33 Aligned_cols=86 Identities=13% Similarity=0.089 Sum_probs=51.4
Q ss_pred ccccEEEEeCCceEEEEEecCCCchhhhhcc----------CCCCCCC--CCCHHHHHHHHHHHHH--HHHHhhccCCee
Q 036334 404 VPLRAFYYSKDEKLLVYDYMPAGSLSALLHG----------SRGSGRT--PLDWDNRMRIALSAAR--GLAHLHVSGKIV 469 (654)
Q Consensus 404 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~----------~~~~~~~--~l~~~~~~~i~~~ia~--~l~~LH~~~~iv 469 (654)
++.+.+.......-+ .|++++.++.+.+.. ....... ...+..+..++..+|- .+.|+=.
T Consensus 402 i~~Y~Vipls~~~Gl-IE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YILG----- 475 (614)
T 3ls8_A 402 LTPYKVLATSTKHGF-MQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILG----- 475 (614)
T ss_dssp CCCCCEEESSSSEEE-EECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHHT-----
T ss_pred eeccEEEEecCCCce-EEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheeee-----
Confidence 344554444444433 477776555555432 1111111 1235666777776653 3555532
Q ss_pred cCCCCCCcEEECCCCCeEEeccCCCC
Q 036334 470 HGNIKASNILLRPDHDACVSDFGLNP 495 (654)
Q Consensus 470 HrDlk~~NIll~~~~~~kl~Dfgla~ 495 (654)
=+|=.++|||++.+|++.=+|||..-
T Consensus 476 igDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 476 VGDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp CCCCCTTSEEECTTSCEEECCCSSCT
T ss_pred ccCCCCcceeEcCCCCEeeeehHHhh
Confidence 36889999999999999999999863
No 465
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=31.29 E-value=37 Score=27.12 Aligned_cols=14 Identities=29% Similarity=0.451 Sum_probs=6.0
Q ss_pred CCCCcccccccccc
Q 036334 112 DFSNLTLLRSLYLQ 125 (654)
Q Consensus 112 ~~~~l~~L~~L~Ls 125 (654)
.|.++++|+.+.|.
T Consensus 15 aF~~c~~L~~i~iP 28 (100)
T 2lz0_A 15 LFAGNTVIREITVQ 28 (100)
T ss_dssp TTTTCTTCCCEEEC
T ss_pred HhcCCCCCcEEEcC
Confidence 34444444444443
No 466
>2llm_A Amyloid beta A4 protein; alzheimer'S disease, protein fibril; NMR {Homo sapiens} PDB: 2loh_A
Probab=32.64 E-value=14 Score=24.41 Aligned_cols=24 Identities=33% Similarity=0.755 Sum_probs=12.5
Q ss_pred cceeeeeehhhHHHHHHHHHHHHH
Q 036334 258 TAAIVGIAVGGAVFIVLLLLLLLF 281 (654)
Q Consensus 258 ~~~ii~~~i~~~~~~~l~~~~~~~ 281 (654)
..++++..++++++..++++.+++
T Consensus 16 rga~iGL~v~gVai~~vIVvsl~m 39 (43)
T 2llm_A 16 KGAIIGLMVGGVVIATVIVITLVM 39 (43)
Confidence 355666666655554444443333
No 467
>2jp3_A FXYD domain-containing ION transport regulator 4; protein, transcription; NMR {Rattus norvegicus}
Probab=25.61 E-value=23 Score=25.78 Aligned_cols=17 Identities=29% Similarity=0.520 Sum_probs=7.0
Q ss_pred eeeeehhhHHHHHHHHH
Q 036334 261 IVGIAVGGAVFIVLLLL 277 (654)
Q Consensus 261 ii~~~i~~~~~~~l~~~ 277 (654)
+.|.+++++++++.+++
T Consensus 19 igGLifA~vLfi~GI~i 35 (67)
T 2jp3_A 19 LGGLIFGGLLCIAGIAL 35 (67)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred ecchhhHHHHHHHHHHH
Confidence 44444444443333333
No 468
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=25.35 E-value=7.1e+02 Score=27.37 Aligned_cols=45 Identities=22% Similarity=0.152 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHH--HHHHhhccCCeecCCCCCCcEEECCCCCeEEeccCCCC
Q 036334 446 DNRMRIALSAAR--GLAHLHVSGKIVHGNIKASNILLRPDHDACVSDFGLNP 495 (654)
Q Consensus 446 ~~~~~i~~~ia~--~l~~LH~~~~ivHrDlk~~NIll~~~~~~kl~Dfgla~ 495 (654)
..+..++.++|- .+.|+=. =+|-.++||||+.+|++.=+|||..-
T Consensus 529 ~ar~nF~~SlA~~Svv~YILG-----lGDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 529 EVMDTYIKSCAGYCVITYLLG-----VGDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-----CCCCCTTTEEECTTSCEEECCCCSCT
T ss_pred HHHHHHHHHHHHHHHHHHHcc-----CCCCCCcceEEeCCCCEEEEeehhhh
Confidence 455666666552 3445421 36999999999999999999999864
No 469
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=24.64 E-value=4.2e+02 Score=26.27 Aligned_cols=76 Identities=17% Similarity=0.127 Sum_probs=41.3
Q ss_pred ceEEEEEecCCCchhhhhccCCCCCCCCCCHHHHHHHHHHHH--HHHHHhhccC---Cee-cCCCCCCcEEECCCCC-eE
Q 036334 415 EKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALSAA--RGLAHLHVSG---KIV-HGNIKASNILLRPDHD-AC 487 (654)
Q Consensus 415 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~ia--~~l~~LH~~~---~iv-HrDlk~~NIll~~~~~-~k 487 (654)
..+++|||.+|..|...-+... ...+.. +.+.++. -++..+..+. +.+ +.--.+.|||+++++. +.
T Consensus 156 ~~~l~meyv~G~~L~e~~~~~~---~~~f~~----~~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~~~ 228 (342)
T 1cja_A 156 ANILLMELVRGITLNKLTTTSA---PEVLTK----STMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGATVV 228 (342)
T ss_dssp SEEEEEECCCEEESTTCCSSSH---HHHSCH----HHHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTCEE
T ss_pred cceehhhhcCCCccccchhhhh---hhhcCH----HHHHhhchhheehhhhcCCccCcccccCCCChhheEEeCCCCeEE
Confidence 4569999998766654322100 001222 2233332 2344444332 121 1235889999987665 88
Q ss_pred EeccCCCCCc
Q 036334 488 VSDFGLNPLF 497 (654)
Q Consensus 488 l~Dfgla~~~ 497 (654)
++|-+.+...
T Consensus 229 ~IDhn~af~~ 238 (342)
T 1cja_A 229 PIDSKIIPLD 238 (342)
T ss_dssp ECSCCCCCCC
T ss_pred EEcCCccccC
Confidence 8999888553
No 470
>2p4r_T E3 ubiquitin-protein ligase itchy homolog; SH3 domain peptide ligand complex; 2.00A {Rattus norvegicus}
Probab=20.55 E-value=55 Score=18.95 Aligned_cols=8 Identities=63% Similarity=1.182 Sum_probs=3.0
Q ss_pred CCCCCCCC
Q 036334 641 PPPESRTP 648 (654)
Q Consensus 641 ~~~~~~~~ 648 (654)
|+-|++||
T Consensus 8 P~rPsrPp 15 (26)
T 2p4r_T 8 PPRPSRPP 15 (26)
T ss_pred CCCCCCCC
Confidence 33333333
Done!