Your job contains 1 sequence.
>036338
MVRDDLYITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQS
KEFVPNRTLQRLIQIWSDSVQHRVDSSESATGRPVVLSQDEVKDIIRVAISKNEDFSENL
TKIVAFAKESDENKTFLAKFDGLVVMLVEILSNVNDVNMLKQVIRVLDLILNKIEDQQHL
MNLILKRDQDCLNSLLLVLKQQESVDSRIESLRLLEFIAGDADSKVKIAERDGLLAETVK
SLSLDSDRRLIEASLSCLITISSSKRAKTKLINHKLITELGKLITDGHNGNGSGNGNGNG
NGNGSGNGTVLITEKALRLVEILSTTKQGRMEICQDAALLNGVVQKMLKTAQEAVSSSNV
LTKILLLMQSNCTPAVRQMSADLLKIFRVNYKSCLASYDTKTTHIMPF
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 036338
(408 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2174814 - symbol:CMPG2 ""CYS, MET, PRO, and GL... 982 6.4e-99 1
TAIR|locus:2144846 - symbol:AT5G09800 species:3702 "Arabi... 698 7.2e-88 2
TAIR|locus:2093974 - symbol:PUB29 "plant U-box 29" specie... 689 8.2e-85 2
TAIR|locus:2039265 - symbol:PUB23 "plant U-box 23" specie... 314 3.0e-33 2
TAIR|locus:2090604 - symbol:PUB25 "plant U-box 25" specie... 315 3.1e-28 1
TAIR|locus:2152049 - symbol:AT5G65920 species:3702 "Arabi... 235 2.4e-23 2
TAIR|locus:2079964 - symbol:PUB22 "plant U-box 22" specie... 256 4.4e-23 2
TAIR|locus:2012136 - symbol:PUB26 "plant U-box 26" specie... 242 6.5e-23 2
TAIR|locus:2013688 - symbol:PUB17 "plant U-box 17" specie... 270 4.3e-21 1
TAIR|locus:2169861 - symbol:AT5G37490 species:3702 "Arabi... 224 1.2e-20 2
TAIR|locus:2013850 - symbol:CMPG1 ""CYS, MET, PRO, and GL... 261 1.3e-20 1
TAIR|locus:2097390 - symbol:AT3G49810 species:3702 "Arabi... 218 6.5e-20 2
TAIR|locus:2017719 - symbol:AT1G23030 species:3702 "Arabi... 259 7.4e-20 1
UNIPROTKB|Q6EUK7 - symbol:PUB4 "U-box domain-containing p... 256 2.5e-19 1
TAIR|locus:2013990 - symbol:AT1G71020 species:3702 "Arabi... 252 5.8e-19 1
TAIR|locus:2082682 - symbol:PUB14 "plant U-box 14" specie... 251 7.6e-19 1
TAIR|locus:2162276 - symbol:PUB15 "Plant U-Box 15" specie... 237 3.8e-17 1
UNIPROTKB|Q0IMG9 - symbol:SPL11 "E3 ubiquitin-protein lig... 234 9.3e-17 1
TAIR|locus:2181077 - symbol:SAUR21 "SMALL AUXIN UP RNA 21... 230 2.6e-16 1
TAIR|locus:2075140 - symbol:PUB13 "plant U-box 13" specie... 225 9.4e-16 1
TAIR|locus:2141226 - symbol:PUB8 "plant U-box 8" species:... 219 9.6e-16 1
UNIPROTKB|Q5VRH9 - symbol:PUB12 "U-box domain-containing ... 215 1.1e-14 1
TAIR|locus:2079706 - symbol:PUB9 "plant U-box 9" species:... 209 2.9e-14 1
TAIR|locus:2102455 - symbol:AT3G54790 species:3702 "Arabi... 194 3.1e-13 3
TAIR|locus:2010424 - symbol:PUB45 "plant U-box 45" specie... 189 4.2e-11 2
TAIR|locus:2008813 - symbol:AT1G67530 species:3702 "Arabi... 177 1.2e-10 2
TAIR|locus:2158252 - symbol:AT5G67340 species:3702 "Arabi... 155 1.8e-10 3
TAIR|locus:2032472 - symbol:AT1G24330 species:3702 "Arabi... 158 3.0e-09 2
TAIR|locus:2195563 - symbol:PUB19 "plant U-box 19" specie... 167 3.3e-09 1
TAIR|locus:2194564 - symbol:PUB18 "plant U-box 18" specie... 166 4.3e-09 1
TAIR|locus:2146198 - symbol:AT5G18330 species:3702 "Arabi... 163 4.4e-09 1
TAIR|locus:2045334 - symbol:PUB4 "plant U-box 4" species:... 164 9.2e-09 1
TAIR|locus:2050659 - symbol:AT2G45920 species:3702 "Arabi... 155 2.8e-08 1
ZFIN|ZDB-GENE-061110-97 - symbol:zgc:154085 "zgc:154085" ... 152 8.8e-08 1
TAIR|locus:2198165 - symbol:AT1G01660 species:3702 "Arabi... 153 8.8e-08 1
TAIR|locus:2198190 - symbol:PUB54 "plant U-box 54" specie... 146 1.6e-07 1
TAIR|locus:2115365 - symbol:AT4G36550 species:3702 "Arabi... 141 2.5e-07 2
TAIR|locus:2146183 - symbol:AT5G18320 species:3702 "Arabi... 143 8.0e-07 1
TAIR|locus:2030462 - symbol:SAUL1 "senescence-associated ... 112 2.2e-06 2
UNIPROTKB|E2QX39 - symbol:WDSUB1 "Uncharacterized protein... 139 2.4e-06 1
UNIPROTKB|Q8N9V3 - symbol:WDSUB1 "WD repeat, SAM and U-bo... 139 2.4e-06 1
TAIR|locus:2176177 - symbol:AT5G51270 species:3702 "Arabi... 142 2.4e-06 1
UNIPROTKB|Q5ZMC3 - symbol:WDSUB1 "WD repeat, SAM and U-bo... 138 3.0e-06 1
MGI|MGI:1919387 - symbol:Wdsub1 "WD repeat, SAM and U-box... 137 3.9e-06 1
TAIR|locus:2117343 - symbol:AT4G25160 species:3702 "Arabi... 139 5.3e-06 1
RGD|1359296 - symbol:Wdsub1 "WD repeat, sterile alpha mot... 135 6.6e-06 1
TAIR|locus:2101353 - symbol:AT3G49060 species:3702 "Arabi... 137 8.4e-06 1
UNIPROTKB|F1MRF3 - symbol:WDSUB1 "Uncharacterized protein... 133 1.1e-05 1
UNIPROTKB|G3MZA8 - symbol:WDSUB1 "Uncharacterized protein... 133 1.1e-05 1
TAIR|locus:2198180 - symbol:AT1G01670 species:3702 "Arabi... 131 1.1e-05 1
TAIR|locus:2098816 - symbol:AT3G61390 species:3702 "Arabi... 132 1.2e-05 1
UNIPROTKB|Q0DR28 - symbol:PUB57 "U-box domain-containing ... 132 1.6e-05 1
TAIR|locus:2146213 - symbol:AT5G18340 species:3702 "Arabi... 129 2.8e-05 1
TAIR|locus:2047605 - symbol:AT2G19410 species:3702 "Arabi... 130 4.9e-05 1
TAIR|locus:2050669 - symbol:AT2G45910 species:3702 "Arabi... 128 8.5e-05 1
TAIR|locus:504954932 - symbol:AT5G57035 species:3702 "Ara... 126 0.00013 1
TAIR|locus:2151641 - symbol:AT5G61560 species:3702 "Arabi... 121 0.00047 1
DICTYBASE|DDB_G0293212 - symbol:DDB_G0293212 species:4468... 121 0.00051 1
>TAIR|locus:2174814 [details] [associations]
symbol:CMPG2 ""CYS, MET, PRO, and GLY protein 2""
species:3702 "Arabidopsis thaliana" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB010076
HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT023419 EMBL:BT025629
IPI:IPI00540273 RefSeq:NP_201271.1 UniGene:At.19743
UniGene:At.74061 ProteinModelPortal:Q9FLF4 SMR:Q9FLF4 STRING:Q9FLF4
PaxDb:Q9FLF4 PRIDE:Q9FLF4 EnsemblPlants:AT5G64660.1 GeneID:836587
KEGG:ath:AT5G64660 TAIR:At5g64660 eggNOG:NOG315056
InParanoid:Q9FLF4 OMA:CAGLLEF PhylomeDB:Q9FLF4
ProtClustDB:CLSN2684525 Genevestigator:Q9FLF4 Uniprot:Q9FLF4
Length = 420
Score = 982 (350.7 bits), Expect = 6.4e-99, P = 6.4e-99
Identities = 228/443 (51%), Positives = 302/443 (68%)
Query: 1 MVRDDLYITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQS 60
M +DDL ITVP+FFRCPISLDVMKSPVSLCTGVTYDRASIQRWLD GNNTCPATMQ+LQ+
Sbjct: 1 MRKDDLCITVPTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQN 60
Query: 61 KEFVPNRTLQRLIQIWSDSVQHR--VDSSESATGRPVVLSQDEVKDII-RVAISKNE-DF 116
K+F+PNRTLQRLI+IWSDSV+ R V+S+E A P ++DE+ D I RV I K E D
Sbjct: 61 KDFIPNRTLQRLIEIWSDSVRRRTCVESAELAA--P---TRDEIADAIDRVKIEKEERDD 115
Query: 117 SENLTKIVAFAKESDENKTFLAKFDGLVVMLVEILSNVNDVN-------MLKQVIRVLDL 169
E L+KIV F +ESD+N+ FLA D V +LV++++ V+ ++++ +++L
Sbjct: 116 REVLSKIVRFGRESDDNRGFLAGKDDFVKLLVDLINQVDFETTSAAKSLVVQEAVKILST 175
Query: 170 ILNKIEDQQHLMNLILKRDQDCLNSLLLVLKQQESVDSRIESLRLLEFIAGDADSKVKIA 229
I +K+ D++ NLIL +D L S+++ L + +V+ +I+ LLEFIA DA+SK+ IA
Sbjct: 176 IRSKVSDRRRFSNLILTNGRDRL-SVIVYLFKTGNVELKIDCAGLLEFIAVDAESKLLIA 234
Query: 230 ERDGLLAETVKSLSLDSDRRLIEASLSCLITISSSKRAKTKLINHKLITELGKLITDGHX 289
ERDGL+ E +KS+S DSD LIE+SLSCLI ISS KR K L+ KLI ++ KL++D
Sbjct: 235 ERDGLITELMKSISKDSDLSLIESSLSCLIAISSPKRVKLNLLREKLIGDVTKLLSDS-- 292
Query: 290 XXXXXXXXXXXXXXXXXXXTVLITEKALRLVEILSTTKQGRMEICQ-DAALLNGVVQKML 348
+V +TEK L+L+EIL++TK+GR EIC D L VV+K++
Sbjct: 293 ---------------TSSLSVSVTEKCLKLLEILASTKEGRSEICGGDGECLKTVVKKLM 337
Query: 349 KT-----------------------AQEAVSSSNVLTKILLLMQSNCTPAVRQMSADLLK 385
K A EAV+S N +TKILLL+QSNC+PAVR+M DLLK
Sbjct: 338 KVSTAATEHAVTVLWSVSYLFKEDKALEAVTSVNGVTKILLLLQSNCSPAVRRMLTDLLK 397
Query: 386 IFRVNYKSCLASYDTKTTHIMPF 408
+F+VN +SCL++YDTKTTHIMPF
Sbjct: 398 VFKVNSRSCLSAYDTKTTHIMPF 420
>TAIR|locus:2144846 [details] [associations]
symbol:AT5G09800 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0010200 "response to chitin" evidence=IEP;RCA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002688 GenomeReviews:BA000015_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AB020752 EMBL:AL353994 HSSP:Q8VZ40 HOGENOM:HOG000238505
eggNOG:NOG315056 ProtClustDB:CLSN2684525 EMBL:BT010883
EMBL:AK175195 EMBL:AK176549 IPI:IPI00520675 PIR:T49918
RefSeq:NP_196542.1 UniGene:At.32456 ProteinModelPortal:Q9LXE3
SMR:Q9LXE3 IntAct:Q9LXE3 EnsemblPlants:AT5G09800.1 GeneID:830840
KEGG:ath:AT5G09800 TAIR:At5g09800 InParanoid:Q9LXE3 OMA:RSEICDG
PhylomeDB:Q9LXE3 Genevestigator:Q9LXE3 Uniprot:Q9LXE3
Length = 409
Score = 698 (250.8 bits), Expect = 7.2e-88, Sum P(2) = 7.2e-88
Identities = 155/292 (53%), Positives = 199/292 (68%)
Query: 1 MVRDDLYIT-VPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQ 59
M DDLYIT VP FF+CPISLDVMKSPVSL TGVTYDR SIQRWLD GNNTCPATMQ+LQ
Sbjct: 1 MRSDDLYITTVPCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNNTCPATMQILQ 60
Query: 60 SKEFVPNRTLQRLIQIWSDSVQHRVDSSESATGRPVVLSQDEVKDIIRVAISKNEDFSEN 119
+KEFVPN TL RLI WSDS+ R DS + P ++DE I AI + ++
Sbjct: 61 NKEFVPNLTLHRLIDHWSDSINRRADSESPESDTP---TRDE----INAAIERFRIENDA 113
Query: 120 LTKIVAFAKESDENKTFLAKFDGLVVMLVEILS---NVNDVNMLK--QVIRVLDLILNKI 174
+KI+ FA+ESDEN+ FLA D V MLV+++S N +D +L + +++L +I KI
Sbjct: 114 RSKILRFARESDENREFLAGKDDFVAMLVDLISDSRNFSDSQLLLVGEAVKILSMIRRKI 173
Query: 175 EDQQHLMNLILKRDQDCLNSLLLVLKQQESVDSRIESLRLLEFIAGDADSKVKIAERDGL 234
D++ L NLIL DCL S L++K+ +I+ +LEFIA DA+SK+ IA+ +GL
Sbjct: 174 FDRRRLSNLILTNGGDCLTSFFLLIKRGNP-KLKIDCSAVLEFIAVDAESKLIIAKGEGL 232
Query: 235 LAETVKSLSLDSDRRLIEASLSCLITISSSKRAKTKLINHKLITELGKLITD 286
+ E +K +S DSD LIEA+LS LI I+SSKR K LI KL+T+L L+TD
Sbjct: 233 VTEIIKLISSDSDSSLIEANLSLLIAIASSKRVKLALIREKLVTKLTSLLTD 284
Score = 199 (75.1 bits), Expect = 7.2e-88, Sum P(2) = 7.2e-88
Identities = 39/60 (65%), Positives = 48/60 (80%)
Query: 349 KTAQEAVSSSNVLTKILLLMQSNCTPAVRQMSADLLKIFRVNYKSCLASYDTKTTHIMPF 408
K AQ+AV N +TKILLL+QSNC+ VR M DLLK+F+VN +SCL+ Y+TKTTHIMPF
Sbjct: 350 KKAQDAVIRINGVTKILLLLQSNCSLTVRHMLTDLLKVFKVNSRSCLSVYETKTTHIMPF 409
Score = 162 (62.1 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 80/324 (24%), Positives = 145/324 (44%)
Query: 80 VQHRVDSSESATGRPVVLSQDEVKDIIRVAISKNEDFSENLTKIVAFAKESDENKTFLAK 139
+ H DS S +D I AI + ++ +KI+ FA+ESDEN+ FLA
Sbjct: 74 IDHWSDSINRRADSESPESDTPTRDEINAAIERFRIENDARSKILRFARESDENREFLAG 133
Query: 140 FDGLVVMLVEILSNVNDVNMLKQVIRVLDLILNKIEDQQHLMNLILKR--DQDCLNSLLL 197
D V MLV+++S+ + + Q++ V + + KI +++I ++ D+ L++L+L
Sbjct: 134 KDDFVAMLVDLISDSRNFSD-SQLLLVGEAV--KI------LSMIRRKIFDRRRLSNLIL 184
Query: 198 VLKQQESVDSRIESLRLLEFIAGDADSKVKIAERDGLLAETVKSLSLDSDRRLIEASLSC 257
D L++ + K+KI D + ++ +++D++ +LI A
Sbjct: 185 T----NGGDCLTSFFLLIK----RGNPKLKI---D--CSAVLEFIAVDAESKLIIAKGEG 231
Query: 258 LIT-----ISSSKRAKTKLINHKLITELGKLITDGHXXXXXXXXXXXXXXXXXXXXTVLI 312
L+T ISS + N L+ + +V +
Sbjct: 232 LVTEIIKLISSDSDSSLIEANLSLLIAIASSKRVKLALIREKLVTKLTSLLTDPTTSVSV 291
Query: 313 TEKALRLVEILSTTKQGRMEICQDAALLNGVVQKMLKTAQEAVSSS-NVLTKILLLM-QS 370
TEK L+L+E +S+ K+GR EIC D + VV K++K + A + VL + L +
Sbjct: 292 TEKCLKLLEAISSCKEGRSEIC-DGVCVETVVNKLMKVSTAATEHAVTVLWSVCYLFKEK 350
Query: 371 NCTPAVRQMSADLLKIFRVNYKSC 394
AV +++ + KI + +C
Sbjct: 351 KAQDAVIRING-VTKILLLLQSNC 373
>TAIR|locus:2093974 [details] [associations]
symbol:PUB29 "plant U-box 29" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA;IDA] [GO:0010200 "response to chitin"
evidence=IEP] [GO:0070696 "transmembrane receptor protein
serine/threonine kinase binding" evidence=IPI] [GO:0009506
"plasmodesma" evidence=IDA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143
GO:GO:0009506 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
EMBL:AB026654 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000238505
ProtClustDB:CLSN2684525 EMBL:AK117976 EMBL:BT005359 IPI:IPI00545400
RefSeq:NP_188501.1 UniGene:At.38506 ProteinModelPortal:Q9LSA6
SMR:Q9LSA6 IntAct:Q9LSA6 ProMEX:Q9LSA6 EnsemblPlants:AT3G18710.1
GeneID:821402 KEGG:ath:AT3G18710 TAIR:At3g18710 eggNOG:NOG292721
InParanoid:Q9LSA6 OMA:YITVPSF PhylomeDB:Q9LSA6
Genevestigator:Q9LSA6 Uniprot:Q9LSA6
Length = 415
Score = 689 (247.6 bits), Expect = 8.2e-85, Sum P(2) = 8.2e-85
Identities = 154/290 (53%), Positives = 207/290 (71%)
Query: 1 MVRDDL--YITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVL 58
M RD+ YITVPSFF+CPISLDVM+SPVSLCTGVTYDRASIQRWLD GNNTCPATMQ+L
Sbjct: 1 MGRDETETYITVPSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQLL 60
Query: 59 QSKEFVPNRTLQRLIQIWSDSVQHRVDSSESATGRPVVLSQDEVKDIIRVAISKNEDFSE 118
++K+FVPN TLQRLI IWSDS+ R + +S P + K+ + V + + E
Sbjct: 61 KTKDFVPNLTLQRLINIWSDSIGRR-HNGDSPVLNPPSGREVPTKEEVNVLLERLMSL-E 118
Query: 119 NLTKIVAFAKESDENKTFLAKFDGLVVMLVEIL-SNVNDVNMLKQVIRVLDLILNKIEDQ 177
NL KIV F K+SD N+ FL+K V MLV+I+ + + ++ IR+LD I K+ D+
Sbjct: 119 NLMKIVRFVKDSDSNREFLSKKMEFVPMLVDIIRTKKTKIELVIMAIRILDSI--KV-DR 175
Query: 178 QHLMNLILKRDQ-DCLNSLLLVLKQQESVDSRIESLRLLEFIAGDADSKVKIAERDGLLA 236
+ L NL+L D DCL ++LL + Q+ +++S+IES+R+L++I+ DA SK+ IAERDG+L
Sbjct: 176 ERLSNLMLANDGGDCLTAILLAI-QRGNLESKIESVRVLDWISFDAKSKLMIAERDGVLT 234
Query: 237 ETVKSLSL--DSDRRLIEASLSCLITISSSKRAKTKLINHKLITELGKLI 284
E +KS+S+ SD LIEASLS LITIS SKR ++KLI K IT++ ++
Sbjct: 235 EMMKSISITESSDPSLIEASLSFLITISKSKRVRSKLIAAKAITKIKDIL 284
Score = 224 (83.9 bits), Expect = 3.8e-16, P = 3.8e-16
Identities = 73/232 (31%), Positives = 121/232 (52%)
Query: 170 ILNKIE-DQQHLMNLILKRDQDCLNSLLLVLKQQESVDSRIESLRLLEFIAGDADSKVKI 228
IL+ I+ D++ L NL+L D + +L+ Q+ +++S+IES+R+L++I+ DA SK+ I
Sbjct: 167 ILDSIKVDRERLSNLMLANDGGDCLTAILLAIQRGNLESKIESVRVLDWISFDAKSKLMI 226
Query: 229 AERDGLLAETVKSLSLDSDRRLIEASLSCLITISSSKRAKTKLINHKLITELGKLITDGH 288
AERDG+L E +KS+S+ S I+ SK +K + KLI K IT
Sbjct: 227 AERDGVLTEMMKSISITESSDPSLIEASLSFLITISK---SKRVRSKLIA--AKAITK-- 279
Query: 289 XXXXXXXXXXXXXXXXXXXXTVLITEKALRLVEILSTTKQGRMEICQD--AALLNGVVQK 346
V +TEK+L+L+E LS+ ++GR+EIC D + GVV+K
Sbjct: 280 ---------IKDILLTETLTNVAVTEKSLKLLETLSSKREGRLEICGDDNGRCVEGVVKK 330
Query: 347 MLKTAQEAVSSS-NVLTKILLLMQSNCT-PAVRQMSADLLKIFRVNYKSCLA 396
+LK + A + +L + + + + T + S + K+ V +C A
Sbjct: 331 LLKVSTTATEHAVTILWCLCYVFREDKTVEETVERSNGVTKLLVVIQSNCSA 382
Score = 179 (68.1 bits), Expect = 8.2e-85, Sum P(2) = 8.2e-85
Identities = 34/60 (56%), Positives = 47/60 (78%)
Query: 349 KTAQEAVSSSNVLTKILLLMQSNCTPAVRQMSADLLKIFRVNYKSCLASYDTKTTHIMPF 408
KT +E V SN +TK+L+++QSNC+ VRQM+ DL+K+ + N S LA+Y+TKTTHIMPF
Sbjct: 357 KTVEETVERSNGVTKLLVVIQSNCSAMVRQMAKDLIKVLKFN-SSALAAYETKTTHIMPF 415
>TAIR|locus:2039265 [details] [associations]
symbol:PUB23 "plant U-box 23" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;IGI;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0002679 "respiratory burst involved in defense
response" evidence=IGI;RCA] [GO:0006952 "defense response"
evidence=IGI] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006612
"protein targeting to membrane" evidence=RCA] [GO:0006944 "cellular
membrane fusion" evidence=RCA] [GO:0009862 "systemic acquired
resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0031348
"negative regulation of defense response" evidence=RCA] [GO:0035556
"intracellular signal transduction" evidence=RCA] [GO:0042742
"defense response to bacterium" evidence=RCA] [GO:0043069 "negative
regulation of programmed cell death" evidence=RCA] [GO:0050832
"defense response to fungus" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005829 EMBL:CP002685
GenomeReviews:CT485783_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0009414 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 GO:GO:0051865
EMBL:AC007017 GO:GO:0002679 HSSP:Q8VZ40 HOGENOM:HOG000238505
eggNOG:NOG331697 ProtClustDB:CLSN2684770 EMBL:BT005829
EMBL:AK227343 IPI:IPI00548709 PIR:G84774 RefSeq:NP_181137.2
UniGene:At.43241 ProteinModelPortal:Q84TG3 SMR:Q84TG3 IntAct:Q84TG3
STRING:Q84TG3 PRIDE:Q84TG3 EnsemblPlants:AT2G35930.1 GeneID:818166
KEGG:ath:AT2G35930 TAIR:At2g35930 InParanoid:Q84TG3 OMA:RLHARAW
PhylomeDB:Q84TG3 Genevestigator:Q84TG3 Uniprot:Q84TG3
Length = 411
Score = 314 (115.6 bits), Expect = 3.0e-33, Sum P(2) = 3.0e-33
Identities = 87/285 (30%), Positives = 151/285 (52%)
Query: 5 DLYITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGN-NTCPATMQVLQSKEF 63
D I +P FF CPISL++MK PV + TG+TYDR SI++WL +G N+CP T Q + +
Sbjct: 7 DEEIEIPPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDITDADL 66
Query: 64 VPNRTLQRLIQIWSD-SVQHRVDSSESATGRPVVLSQDEVKDIIRVAISKNEDFSENLTK 122
PN TL+RLIQ W + + V+ T RP + + E++ +IR + S +E+ + L +
Sbjct: 67 TPNHTLRRLIQSWCTLNASYGVE--RIPTPRPPIC-KSEIEKLIRDSASSHENQVKCLKR 123
Query: 123 IVAFAKESDENKTFLAKFDGLVVMLVEILSNVNDVNMLKQVIRVLDLILNKIEDQQHLMN 182
+ E+ NK L + G+ L I+SN ++ L L+L+ + + L N
Sbjct: 124 LRQIVSENATNKRCL-EAAGVPEFLANIVSNDSENGSLTD--EALNLLYHLETSETVLKN 180
Query: 183 LIL-KRDQDCLNSLLLVLKQQESVDSRIESLRLLEFIAGDADSKVKIAERDGLLAETVKS 241
L+ K+D + + SL ++ Q+ +SR+ + LL+ I AD + + + E V+
Sbjct: 181 LLNNKKDNNIVKSLTKIM-QRGMYESRVYATLLLKNILEVADPMQSMTLKPEVFTEVVQI 239
Query: 242 LSLDSDRRLIEASLSCLITISSSKRAKTKLINHKLITELGKLITD 286
L ++ +A++ L+ I R + K + +I+ + +L+ D
Sbjct: 240 LDDRISQKATKAAMHILVNICPWGRNRHKAVEAGVISVIIELLMD 284
Score = 64 (27.6 bits), Expect = 3.0e-33, Sum P(2) = 3.0e-33
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 314 EKALRLVEILSTTKQGRMEICQDAALLNGVVQKMLKTAQEAVSSSNVLTKILLLMQSNC- 372
E A+ ++++L +GR E A + V +K+L+ +Q A S+ ++LL + C
Sbjct: 295 EMAMVVLDLLCQCAEGRAEFLNHGAAIAVVCKKILRVSQTA---SDRAVRVLLSVGRFCA 351
Query: 373 TPAV 376
TPA+
Sbjct: 352 TPAL 355
Score = 47 (21.6 bits), Expect = 1.8e-31, Sum P(2) = 1.8e-31
Identities = 11/38 (28%), Positives = 22/38 (57%)
Query: 360 VLTKILLLMQSNCTPAVRQMSADLLKIFRVNYKS--CL 395
V+ K+ L++Q +C ++ + +LLK+ +K CL
Sbjct: 364 VVAKLCLVLQVSCGGKTKEKAKELLKLHARVWKDSPCL 401
>TAIR|locus:2090604 [details] [associations]
symbol:PUB25 "plant U-box 25" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0010200 "response to chitin"
evidence=IEP] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB025624
HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT025982 EMBL:AY086503
EMBL:AK229923 IPI:IPI00525992 RefSeq:NP_566632.1 UniGene:At.5707
ProteinModelPortal:Q9LT79 SMR:Q9LT79 EnsemblPlants:AT3G19380.1
GeneID:821472 KEGG:ath:AT3G19380 TAIR:At3g19380 eggNOG:NOG262907
InParanoid:Q9LT79 OMA:ECTERAK PhylomeDB:Q9LT79
ProtClustDB:CLSN2682687 Genevestigator:Q9LT79 Uniprot:Q9LT79
Length = 421
Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 113/423 (26%), Positives = 195/423 (46%)
Query: 5 DLYITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNT-CPATMQVLQSKEF 63
DL I +P FRCPISL++M+ PV++CTG TYDRASI+ W+ GNNT CP T L
Sbjct: 9 DLGIQIPYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLSDFTL 68
Query: 64 VPNRTLQRLIQIW-----SDSVQHRVDSSESA--TGRPVVLSQDEVKDIIRVAISKNEDF 116
+PN TL+RLIQ W S+ V+ + A T +LSQ V++
Sbjct: 69 IPNHTLRRLIQEWCVANRSNGVERIPTPKQPADPTSVRALLSQASAITGTHVSVRSR--- 125
Query: 117 SENLTKIVAFAKESDENKTFLAKFDGLVVMLVEILSNVNDVNMLKQVIRVLDLILNKIED 176
+ L ++ FA++SD+N+ +A + +++ + S ++ + + +L ++L E
Sbjct: 126 AAALRRLRGFARDSDKNRVLIAAHNATEILIKILFSETTSSELVSESLALL-VMLPITEP 184
Query: 177 QQHLMNLILKRDQDCLNSLLLVLKQQESVDSRIESLRLLEFIA-G--DADSKVKIAERDG 233
Q + + D + L +L S+++R+ + L+E ++ G AD K I+ +
Sbjct: 185 NQFVS---ISSDPGRVEFLTRLLFDS-SIETRVNAAALIEIVSTGTKSADLKGSISNSES 240
Query: 234 LLAETVKSLSLD--SDRRLIEASLSCLITISSSKRAKTKLINHKLITEL-GKLITDGHXX 290
+ E V L + S RR ++ + L + S K + I L +L D
Sbjct: 241 VF-EGVLDLLRNPISSRRALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRLAADFDRC 299
Query: 291 XXXXXXXXXXXXXXXXXXTVLITEKALRLVEILSTTKQGRMEICQDAA-LLNGVVQKMLK 349
E AL + ++ T + + AA L + +
Sbjct: 300 DTERALATVELLCRTPEGCAAFGEHALTVPLLVKTILRVSDRATEYAAGALLALCTAEER 359
Query: 350 TAQEAVSSSNVLTKILLLMQSNCTPAVRQMSADLLKIFR---VNYKSCLASYDTK-TTHI 405
+EA + + V+ ++LL++QS CT ++ + LLK+ R +Y S S D ++ +
Sbjct: 360 WREEA-AGAGVVVQLLLMVQSECTERAKKKAQKLLKLLRDSWPDYNSFANSDDFGCSSQV 418
Query: 406 MPF 408
+PF
Sbjct: 419 VPF 421
>TAIR|locus:2152049 [details] [associations]
symbol:AT5G65920 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AL021684 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB018108
HSSP:Q8VZ40 HOGENOM:HOG000077474 ProtClustDB:CLSN2686657
EMBL:AY062476 EMBL:AY093259 IPI:IPI00534056 PIR:T05882
RefSeq:NP_201393.1 UniGene:At.27331 UniGene:At.74058
ProteinModelPortal:Q9FHN9 SMR:Q9FHN9 EnsemblPlants:AT5G65920.1
GeneID:836721 KEGG:ath:AT5G65920 TAIR:At5g65920 eggNOG:NOG268350
InParanoid:Q9FHN9 OMA:CKLASEE PhylomeDB:Q9FHN9
Genevestigator:Q9FHN9 Uniprot:Q9FHN9
Length = 444
Score = 235 (87.8 bits), Expect = 2.4e-23, Sum P(2) = 2.4e-23
Identities = 77/273 (28%), Positives = 131/273 (47%)
Query: 10 VPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNRTL 69
+PS F CPISL+ M+ PV+LCTG TY+R++I +W + G+ TCP TMQ L PN+TL
Sbjct: 60 IPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNIGHCTCPTTMQELWDDLVTPNKTL 119
Query: 70 QRLIQIW-SDSVQHRVDSSESATGRPVVLSQDEVKDIIRVAISKNEDFSENLTKIVAFAK 128
+LI W S SE GR + E+ +R A K + + + K V A
Sbjct: 120 HQLIYTWFSQKYVLMKKRSEDVQGRAI-----EILGTLRKAKGKAKVHALSELKQVVMA- 173
Query: 129 ESDENKTFLAKFDGLVVMLVEILSNVNDVNMLKQVIRVLDLILNKIEDQQHLMNLILKRD 188
+ KT + +G V ++ +LS + + I +L +N D L+
Sbjct: 174 HAIAKKTVVD--EGGVFVISSLLSPFTSHAVGSEAIAIL---VNLELDSDSKAGLM---- 224
Query: 189 QDCLNSLLLVLKQQESVDSRIESLRLLEFIAGDADSKVKIAERDGLLAETVKSLSLDSDR 248
Q SL++ + S++++I RL+ + + + ++ LL ++ L D R
Sbjct: 225 QPARVSLMVDMLNDGSIETKINCARLIGRLVEEKGFRAELVSSHSLLVGLMR-LVKDRRR 283
Query: 249 RL-IEASLSCLITISSSKRAKTKLINHKLITEL 280
R + +L+ L ++S K+ + L+ + +L
Sbjct: 284 RNGVSPALTLLKSVSVHKQVRNLLVRIGAVPQL 316
Score = 94 (38.1 bits), Expect = 2.4e-23, Sum P(2) = 2.4e-23
Identities = 26/76 (34%), Positives = 41/76 (53%)
Query: 332 EICQDAALLNGVVQKMLKTAQEAVSSSNV----LTKILLLMQSNCTPAVRQMSADLLKIF 387
E C + A+ ++ + K A E SS V K+LL++QS C PA++Q SA+LLK+
Sbjct: 367 EKCTNYAI--SILWSVCKLASEECSSLAVEVGLAAKLLLVIQSGCDPALKQRSAELLKLC 424
Query: 388 RVNYKSCLASYDTKTT 403
++Y + K T
Sbjct: 425 SLHYSDSMFISKCKLT 440
Score = 49 (22.3 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 16/78 (20%), Positives = 39/78 (50%)
Query: 314 EKALRLVEILSTTKQGRMEICQDAALLNGVVQKMLKTAQEAVSSS-NVLTKILLLMQSNC 372
E AL +++ L +GR+ + + V+ ++K +++ + + ++L + L C
Sbjct: 329 ESALFVLDSLCLESEGRIALKDSVNTIPHTVRLLMKVSEKCTNYAISILWSVCKLASEEC 388
Query: 373 TP-AVRQ-MSADLLKIFR 388
+ AV ++A LL + +
Sbjct: 389 SSLAVEVGLAAKLLLVIQ 406
>TAIR|locus:2079964 [details] [associations]
symbol:PUB22 "plant U-box 22" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;IGI;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0002679 "respiratory burst involved in defense
response" evidence=IGI;RCA] [GO:0006952 "defense response"
evidence=IGI] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0006865 "amino acid transport" evidence=RCA]
[GO:0015824 "proline transport" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005829 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0009414
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GO:GO:0051865 EMBL:AL050300 GO:GO:0002679 HSSP:Q8VZ40
HOGENOM:HOG000238505 EMBL:BT015763 EMBL:BT020203 EMBL:AK228993
IPI:IPI00521627 PIR:T08454 RefSeq:NP_190813.1 UniGene:At.35294
ProteinModelPortal:Q9SVC6 SMR:Q9SVC6 STRING:Q9SVC6
EnsemblPlants:AT3G52450.1 GeneID:824410 KEGG:ath:AT3G52450
TAIR:At3g52450 eggNOG:NOG331697 InParanoid:Q9SVC6 OMA:RNSEMAM
PhylomeDB:Q9SVC6 ProtClustDB:CLSN2684770 Genevestigator:Q9SVC6
Uniprot:Q9SVC6
Length = 435
Score = 256 (95.2 bits), Expect = 4.4e-23, Sum P(2) = 4.4e-23
Identities = 67/210 (31%), Positives = 112/210 (53%)
Query: 5 DLYITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGN-NTCPATMQVLQSKEF 63
D I +PSFF CPISLD+MK PV + TG+TYDR SI++WL SG N+CP T QV+ +
Sbjct: 2 DQEIEIPSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETDL 61
Query: 64 VPNRTLQRLIQIWSDSVQHRVDSSESATGRPVVLSQDEVKDIIRVAISKNEDFSENLTKI 123
PN TL+RLIQ W ++ T +P + + E++ +I+ + S + + + L ++
Sbjct: 62 TPNHTLRRLIQSWC-TLNASYGIERIPTPKPPIC-KSEIEKLIKESSSSHLNQVKCLKRL 119
Query: 124 VAFAKESDENKTFLAKFDGLVVMLVEILSN-VNDVNMLKQVIRVLDLILNKIEDQQHLMN 182
E+ NK L + + L I+SN V+ N + +L N + Q +++
Sbjct: 120 RQIVSENTTNKRCLEAAE-VPEFLANIVSNSVDTYNSPSSSLSSSNL--NDM-CQSNMLE 175
Query: 183 LILKRDQDCLNSLLLVLKQQESVDSRIESL 212
+ ++ L VL ++ ++ ++SL
Sbjct: 176 NRFDSSRSLMDEALSVLYHLDTSETALKSL 205
Score = 63 (27.2 bits), Expect = 4.4e-23, Sum P(2) = 4.4e-23
Identities = 23/84 (27%), Positives = 47/84 (55%)
Query: 313 TEKALRLVEILSTTKQGRMEICQDAALLNGVVQKMLKTAQEAVSSSNVLTKILLLMQSNC 372
+E A+ ++++L +GR E A + V +K+L+ +Q ++S + ++LL + C
Sbjct: 318 SEMAMVVLDMLCQCAEGRAEFLNHGAAIAVVSKKILRVSQ--ITSERAV-RVLLSVGRFC 374
Query: 373 -TPAVRQMSADLLKIFRVNYKSCL 395
TP++ Q ++L++ V K CL
Sbjct: 375 ATPSLLQ---EMLQL-GVVAKLCL 394
Score = 46 (21.3 bits), Expect = 2.6e-21, Sum P(2) = 2.6e-21
Identities = 8/27 (29%), Positives = 18/27 (66%)
Query: 360 VLTKILLLMQSNCTPAVRQMSADLLKI 386
V+ K+ L++Q +C ++ + +LLK+
Sbjct: 388 VVAKLCLVLQVSCGNKTKEKAKELLKL 414
>TAIR|locus:2012136 [details] [associations]
symbol:PUB26 "plant U-box 26" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC011807 HSSP:Q8VZ40
HOGENOM:HOG000238505 eggNOG:NOG262907 ProtClustDB:CLSN2682687
EMBL:AK118346 EMBL:BT029013 IPI:IPI00542667 PIR:E96534
RefSeq:NP_175400.1 UniGene:At.38168 ProteinModelPortal:Q9FXA4
SMR:Q9FXA4 EnsemblPlants:AT1G49780.1 GeneID:841401
KEGG:ath:AT1G49780 TAIR:At1g49780 InParanoid:Q9FXA4 OMA:CTERAKR
PhylomeDB:Q9FXA4 Genevestigator:Q9FXA4 Uniprot:Q9FXA4
Length = 421
Score = 242 (90.2 bits), Expect = 6.5e-23, Sum P(2) = 6.5e-23
Identities = 71/278 (25%), Positives = 132/278 (47%)
Query: 5 DLYITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFV 64
DL I +P FRCPISLD+M PV++ TG TYDR SI W+ GN TCP T L +
Sbjct: 9 DLGIQIPYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTTCPVTRVALSDFTLI 68
Query: 65 PNRTLQRLIQIW-----SDSVQHRVDSSESATGRPV--VLSQDEVKDIIRVAISKNEDFS 117
PN TL+RLIQ W S+ V+ + A V +LSQ V++ +
Sbjct: 69 PNHTLRRLIQEWCVANRSNGVERIPTPKQPADPISVRSLLSQASAITGTHVSVRSR---A 125
Query: 118 ENLTKIVAFAKESDENKTFLAKFDGLVVMLVEILSNVNDVNMLKQVIR---VLDLILNKI 174
+ ++ A++S++N+ +A + +++ + +++ ++ +++ L ++L+
Sbjct: 126 AAIRRLRGLARDSEKNRVLIAGHNAREILVRILFADIETTSLSSELVSESLALLVLLHMT 185
Query: 175 EDQQHLMNLILKRDQDCLNSLLLVLKQQESVDSRIESLRLLEFI---AGDADSKVKIAER 231
E + + D + + +L S++ R+ + L+E + A D K+ I+
Sbjct: 186 ETECEAV----ASDPSRVGFMTRLLFDS-SIEIRVNAAALIEMVLTGAKSMDLKLIISGS 240
Query: 232 DGLLAETVKSLSLD-SDRRLIEASLSCLITISSSKRAK 268
D + + L S RR ++ + + + K+ +
Sbjct: 241 DSIFEGVLDLLKNPISSRRALKIGIKAIFALCLVKQTR 278
Score = 79 (32.9 bits), Expect = 6.5e-23, Sum P(2) = 6.5e-23
Identities = 17/59 (28%), Positives = 37/59 (62%)
Query: 352 QEAVSSSNVLTKILLLMQSNCTPAVRQMSADLLKIFRVNYK--SCLASYDTKTTHIMPF 408
++ +++ ++T++LLL+QS+CT ++ + LLK+ R ++ S + S D + + PF
Sbjct: 363 RDEAAAAGLVTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPDDSTVHSDDFNRSEVAPF 421
Score = 41 (19.5 bits), Expect = 6.0e-19, Sum P(2) = 6.0e-19
Identities = 13/60 (21%), Positives = 25/60 (41%)
Query: 313 TEKALRLVEILSTTKQGRMEICQDAALLNGVVQKMLKTAQEAVSSSNVLTKILLLMQSNC 372
TE+ L VE+L +G + A + +V+ +L+ + A + L + C
Sbjct: 303 TERGLATVELLCRLPEGCAAFGEHALTVPLMVKTILRVSDRATEYAAGALLALCTAEERC 362
>TAIR|locus:2013688 [details] [associations]
symbol:PUB17 "plant U-box 17" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0009626
"plant-type hypersensitive response" evidence=IGI] [GO:0009814
"defense response, incompatible interaction" evidence=IMP]
[GO:0009817 "defense response to fungus, incompatible interaction"
evidence=IGI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0009817 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 UniGene:At.17411 EMBL:AC068667
GO:GO:0000151 eggNOG:NOG329430 HOGENOM:HOG000238412 OMA:ENRAYIA
HSSP:Q8VZ40 EMBL:AY064045 EMBL:AY150512 IPI:IPI00523315 PIR:A86416
RefSeq:NP_174228.1 UniGene:At.27415 ProteinModelPortal:Q9C7R6
SMR:Q9C7R6 IntAct:Q9C7R6 STRING:Q9C7R6 PRIDE:Q9C7R6
EnsemblPlants:AT1G29340.1 GeneID:839808 KEGG:ath:AT1G29340
TAIR:At1g29340 InParanoid:Q9C7R6 PhylomeDB:Q9C7R6
ProtClustDB:CLSN2679704 Genevestigator:Q9C7R6 Uniprot:Q9C7R6
Length = 729
Score = 270 (100.1 bits), Expect = 4.3e-21, P = 4.3e-21
Identities = 86/296 (29%), Positives = 149/296 (50%)
Query: 5 DLYITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFV 64
D +ITVP F CPISLD+M PV + TG TYDR SI RW++ G+ TCP T Q+L V
Sbjct: 300 DTFITVPKDFVCPISLDLMTDPVIISTGQTYDRNSIARWIEEGHCTCPKTGQMLMDSRIV 359
Query: 65 PNRTLQRLIQIW--SDSVQHR---VDS-SES-ATGRPVVLSQDEVKDIIRVAISKNEDFS 117
PNR L+ LI W + + + DS +ES A+ P + + K + + I D S
Sbjct: 360 PNRALKNLIVQWCTASGISYESEFTDSPNESFASALPTKAAVEANKATVSILIKYLADGS 419
Query: 118 ENLTKIVA-----FAKESDENKTFLAKFDGLVVMLVEILSNVNDVNMLKQVIRVLDLILN 172
+ + A AK EN+ ++A+ G + L +L++ N + V +L+L +
Sbjct: 420 QAAQTVAAREIRLLAKTGKENRAYIAEA-GAIPHLCRLLTSENAIAQENSVTAMLNLSIY 478
Query: 173 KIEDQQHLMNLILKRDQDCLNSLLLVLKQQESVDSRIESLRLLEFIAGDADSKVKIAERD 232
+ +++ +M + DCL S++ VL +V+++ + L ++ + K +IA D
Sbjct: 479 E-KNKSRIME-----EGDCLESIVSVLVSGLTVEAQENAAATLFSLSAVHEYKKRIAIVD 532
Query: 233 GLLAETVKSLSLDSDRRLIEASLSCLITISSSKRAKTKLINHKLITEL-GKLITDG 287
+ E + L + R + +++ L +S+ +++I ++ L G L +G
Sbjct: 533 QCV-EALALLLQNGTPRGKKDAVTALYNLSTHPDNCSRMIEGGGVSSLVGALKNEG 587
>TAIR|locus:2169861 [details] [associations]
symbol:AT5G37490 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0010200 "response to chitin"
evidence=IEP;RCA] [GO:0002679 "respiratory burst involved in
defense response" evidence=RCA] [GO:0009693 "ethylene biosynthetic
process" evidence=RCA] [GO:0035556 "intracellular signal
transduction" evidence=RCA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002688 GenomeReviews:BA000015_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AB025630 HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT020311
EMBL:BT020439 IPI:IPI00541809 RefSeq:NP_198565.1 UniGene:At.30484
ProteinModelPortal:Q5PNY6 SMR:Q5PNY6 STRING:Q5PNY6 PRIDE:Q5PNY6
EnsemblPlants:AT5G37490.1 GeneID:833727 KEGG:ath:AT5G37490
TAIR:At5g37490 eggNOG:NOG287305 InParanoid:Q5PNY6 OMA:HAPLRHE
PhylomeDB:Q5PNY6 ProtClustDB:CLSN2916550 Genevestigator:Q5PNY6
Uniprot:Q5PNY6
Length = 435
Score = 224 (83.9 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 51/132 (38%), Positives = 77/132 (58%)
Query: 8 ITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNR 67
IT+P F+CPIS+D+MK PV + TG+TYDR SI+ W++SGN TCP T VL + + +PN
Sbjct: 29 ITIPPEFQCPISIDLMKDPVIISTGITYDRVSIETWINSGNKTCPVTNTVLTTFDQIPNH 88
Query: 68 TLQRLIQIWSDSVQHRVDSSESATGRPVVLSQDEVKDIIRVAIS--KNEDFSEN---LTK 122
T++++IQ W V+ + V L EV +I R S + D+ + + K
Sbjct: 89 TIRKMIQGWC--VEKGSPLIQRIPTPRVPLMPCEVYEISRKLSSATRRGDYEKCGVIIEK 146
Query: 123 IVAFAKESDENK 134
I ES++N+
Sbjct: 147 IKKLGDESEKNR 158
Score = 81 (33.6 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 21/65 (32%), Positives = 41/65 (63%)
Query: 312 ITEKALRLVEILSTTKQGRMEICQDAALLNGVVQKMLKTAQEAVSSSNVLTKILLLMQSN 371
+ EKAL +++ + T+ GR E+ ++A ++ +V+K+ K ++ A SS ++ IL L ++
Sbjct: 314 VCEKALAVLDAICETEHGREEVRKNALVMPLLVKKIAKVSELATRSS--MSMILKLWKTG 371
Query: 372 CTPAV 376
T AV
Sbjct: 372 NTVAV 376
Score = 56 (24.8 bits), Expect = 4.9e-18, Sum P(2) = 4.9e-18
Identities = 32/150 (21%), Positives = 65/150 (43%)
Query: 230 ERDGLLAETVKSLSLDSD--RRLI-EASLS-----CLITISSSKRAKTKLINH--KLITE 279
E+ G++ E +K L +S+ R+ + E S+ C S ++ T ++N L+T
Sbjct: 138 EKCGVIIEKIKKLGDESEKNRKCVNENSVGWVLCDCFDKFSGDEKL-TFMLNEILSLLTW 196
Query: 280 LGKLITDGHXXXXXXXXXXXXXXXXXXXXTVLITEKALRLVEILSTTKQGRMEICQDAAL 339
+ + +G + A + EILS + R+ A+
Sbjct: 197 MFPIGLEGISKLASATSFRCVAGLLKSTDDSVRQNAAFIMKEILSLDET-RVH---SFAV 252
Query: 340 LNGVVQKMLKTAQEAVSSSNVLTKILLLMQ 369
NGV + ++K +++VSSS+ + ++ + Q
Sbjct: 253 ENGVAEALVKLIRDSVSSSSTKSSLIAIYQ 282
>TAIR|locus:2013850 [details] [associations]
symbol:CMPG1 ""CYS, MET, PRO, and GLY protein 1""
species:3702 "Arabidopsis thaliana" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0015824 "proline transport" evidence=RCA] [GO:0035556
"intracellular signal transduction" evidence=RCA]
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC026480
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 UniGene:At.23473 HSSP:Q8VZ40 EMBL:AY034913
EMBL:AY063104 EMBL:AY087421 IPI:IPI00524256 PIR:D96686
RefSeq:NP_564866.1 UniGene:At.71474 ProteinModelPortal:Q9C8D1
SMR:Q9C8D1 STRING:Q9C8D1 EnsemblPlants:AT1G66160.1 GeneID:842931
KEGG:ath:AT1G66160 TAIR:At1g66160 eggNOG:NOG283749
HOGENOM:HOG000238505 InParanoid:Q9C8D1 OMA:AFSENAN PhylomeDB:Q9C8D1
ProtClustDB:CLSN2689039 Genevestigator:Q9C8D1 Uniprot:Q9C8D1
Length = 431
Score = 261 (96.9 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 100/397 (25%), Positives = 189/397 (47%)
Query: 4 DDLYITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEF 63
+++ IT+PS F+CPIS ++MK PV + +G+TYDR +I++W +SG TCP T VL S E
Sbjct: 27 EEVEITIPSQFQCPISYELMKDPVIIASGITYDRENIEKWFESGYQTCPVTNTVLTSLEQ 86
Query: 64 VPNRTLQRLIQIW-SDSVQHRVDSSESATGRPVVLSQDEVKDII-RV-AISKNEDFS--- 117
+PN T++R+IQ W S+ ++ T R V S +V +I R+ A ++ D++
Sbjct: 87 IPNHTIRRMIQGWCGSSLGGGIE--RIPTPRVPVTSH-QVSEICERLSAATRRGDYAACM 143
Query: 118 ENLTKIVAFAKESDENKTFLAKFD-GLVVMLV-EILS-NVNDVNMLKQVIRVLDLILN-K 173
E +TK+ KES+ N+ + + GLV+ + + S N N +L++ + VL +L
Sbjct: 144 EMVTKMTRLGKESERNRKCVKENGAGLVLCVCFDAFSENANASLLLEETVSVLTWMLPIG 203
Query: 174 IEDQQHLMNLILKRDQDCLNSLLLVLKQQESVDSRIESLRLLEFIAGDADSKVKIAERDG 233
+E Q L N L+ +L+ + ++ LLE + KI +G
Sbjct: 204 LEGQSKLTTT------SSFNRLVELLRNGDQ-NAAFLIKELLELNVTHVHALTKI---NG 253
Query: 234 LLAETVKSLSLDSDRRLIEASLSCLITISSSKRAKTKLINHKLITELGKLITDGHXXXXX 293
+ +KS++ DS + + +S I +++ ++ + L+ +++ D
Sbjct: 254 VQEAFMKSINRDST--CVNSLISIHHMILTNQETVSRFLELDLVNITVEMLVDSENSVCE 311
Query: 294 XXXXXXXXXXXXXXXTVLITEKALRLVEILSTTKQGRMEICQDAALLNGVVQKMLKTAQ- 352
+ L ++ IL K+ ++I + L++ V+ K+ K+
Sbjct: 312 KALTVLNVICETKEGREKVRRNKL-VIPIL--VKK-ILKISEKKDLVS-VMWKVCKSGDG 366
Query: 353 ---EAVSSSNVLTKILLLMQSNCTPAVRQMSADLLKI 386
E K+++++Q C ++ +LLK+
Sbjct: 367 SEVEEALRLGAFKKLVVMLQVGCGEGTKEKVTELLKM 403
>TAIR|locus:2097390 [details] [associations]
symbol:AT3G49810 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:BT029174
EMBL:AY084697 IPI:IPI00522796 PIR:T46047 RefSeq:NP_566927.1
UniGene:At.43608 UniGene:At.71195 ProteinModelPortal:Q058P4
SMR:Q058P4 IntAct:Q058P4 PRIDE:Q058P4 EnsemblPlants:AT3G49810.1
GeneID:824143 KEGG:ath:AT3G49810 TAIR:At3g49810 eggNOG:NOG289804
HOGENOM:HOG000077474 InParanoid:Q058P4 OMA:ELRKMMD PhylomeDB:Q058P4
ProtClustDB:CLSN2686657 Genevestigator:Q058P4 Uniprot:Q058P4
Length = 448
Score = 218 (81.8 bits), Expect = 6.5e-20, Sum P(2) = 6.5e-20
Identities = 74/283 (26%), Positives = 132/283 (46%)
Query: 1 MVRD-DLYITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQ 59
M+++ DL +PS F CPISL+ M+ PV+LCTG TY+R +I +W + G+ TCP TMQ L
Sbjct: 55 MIKELDLQ-DIPSVFICPISLEPMQDPVTLCTGQTYERLNIHKWFNLGHLTCPTTMQELW 113
Query: 60 SKEFVPNRTLQRLIQIW-SDSVQHRVDSSESATGRPVVLSQDEVKDIIRVAISKNEDFSE 118
PN+TL LI W S SE GR + E+ ++ A + +
Sbjct: 114 DDTVTPNKTLHHLIYTWFSQKYVLMKKRSEDVQGRAI-----EILGTLKKAKGQARVHAL 168
Query: 119 NLTKIVAFAKESDENKTFLAKFDGLVVMLVEILSNVNDVNMLKQVIRVL-DLILNKIEDQ 177
+ K + A KT + +G V ++ +L + +V+ +L L L+ + +
Sbjct: 169 SELKQIVIAHLM-ARKTVVE--EGGVSVISSLLGPFTSHAVGSEVVAILVSLDLDS-DSK 224
Query: 178 QHLMNLILKRDQDCLNSLLLVLKQQESVDSRIESLRLLEFIAGDADSKVKIAERDGLLAE 237
LM Q SL++ + S +++I RL+ + + + ++ LL
Sbjct: 225 SGLM-------QPAKVSLIVDMLNDGSNETKINCARLIRGLVEEKGFRAELVSSHSLLVG 277
Query: 238 TVKSLSLDSDRRLIEASLSCLITISSSKRAKTKLINHKLITEL 280
++ + R + +L L IS K+ ++ +++ + +L
Sbjct: 278 LMRLVKDKRHRNGVSPALRLLKPISVHKQVRSLMVSIGAVPQL 320
Score = 82 (33.9 bits), Expect = 6.5e-20, Sum P(2) = 6.5e-20
Identities = 25/76 (32%), Positives = 39/76 (51%)
Query: 332 EICQDAALLNGVVQKMLKTAQEAVSSSNV----LTKILLLMQSNCTPAVRQMSADLLKIF 387
E C + AL ++ + K A E S V K+LL++QS C A++Q SA+LLK+
Sbjct: 371 ENCTNYAL--SILWSVCKLAPEECSPLAVEVGLAAKLLLVIQSGCDAALKQRSAELLKLC 428
Query: 388 RVNYKSCLASYDTKTT 403
++Y + K T
Sbjct: 429 SLHYSDTMFISKCKLT 444
Score = 61 (26.5 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 17/94 (18%), Positives = 44/94 (46%)
Query: 314 EKALRLVEILSTTKQGRMEICQDAALLNGVVQKMLKTAQEAVSSS-NVLTKILLLMQSNC 372
E AL +++ L T +GR+ + A + V+ +++ ++ + + ++L + L C
Sbjct: 333 ELALFVLDALCTDVEGRVAVKDSANTIPYTVRVLMRVSENCTNYALSILWSVCKLAPEEC 392
Query: 373 TPAVRQMSADLLKIFRVNYKSCLASYDTKTTHIM 406
+P ++ K+ V C A+ ++ ++
Sbjct: 393 SPLAVEVGL-AAKLLLVIQSGCDAALKQRSAELL 425
>TAIR|locus:2017719 [details] [associations]
symbol:AT1G23030 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0010200 "response to
chitin" evidence=IEP] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AF000657
HOGENOM:HOG000238412 HSSP:Q8VZ40 ProtClustDB:CLSN2681864
EMBL:BT002518 EMBL:AK221923 IPI:IPI00532693 PIR:D86364
RefSeq:NP_173716.1 UniGene:At.41572 UniGene:At.74178
ProteinModelPortal:Q8GUG9 SMR:Q8GUG9 PaxDb:Q8GUG9 PRIDE:Q8GUG9
EnsemblPlants:AT1G23030.1 GeneID:838911 KEGG:ath:AT1G23030
TAIR:At1g23030 eggNOG:KOG0167 InParanoid:Q8GUG9 OMA:IDCGNLT
PhylomeDB:Q8GUG9 Genevestigator:Q8GUG9 Uniprot:Q8GUG9
Length = 612
Score = 259 (96.2 bits), Expect = 7.4e-20, P = 7.4e-20
Identities = 99/395 (25%), Positives = 180/395 (45%)
Query: 8 ITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNR 67
+T+P F CP+SL++MK PV + TG TY+RA IQRW+D GN TCP T Q L++ PN
Sbjct: 239 LTIPVDFLCPVSLELMKDPVIVATGQTYERAYIQRWIDCGNLTCPKTQQKLENFTLTPNY 298
Query: 68 TLQRLIQIWSDSVQHRVDSSESATGRPVVLSQDE--VKDII-RVAISKNEDFSENLTKIV 124
L+ LI W +H ++ S D ++ ++ R++ ED +++I
Sbjct: 299 VLRSLISRWC--AEHNIEQPAGYINGRTKNSGDMSVIRALVQRLSSRSTEDRRNAVSEIR 356
Query: 125 AFAKESDENKTFLAKFDGLVVMLVEILSNVNDVNMLKQVIRVLDLILNKIEDQQHLMNLI 184
+ +K S +N+ +A+ G + +LV +L++ DV + I + L L+ E+ + L+
Sbjct: 357 SLSKRSTDNRILIAEA-GAIPVLVNLLTS-EDVATQENAITCV-LNLSIYENNKELIMFA 413
Query: 185 LKRDQDCLNSLLLVLKQQESVDSRIESLRLLEFIAGDADSKVKIAERDGLLAETVKSLSL 244
+ S++ VL+ ++++R + L F AD I G + V L
Sbjct: 414 -----GAVTSIVQVLRAG-TMEARENAAATL-FSLSLADENKIIIGGSGAIPALVDLLEN 466
Query: 245 DSDRRLIEASLSCLITISSSKRAKTKLINHKLITELGKLITDG--HXXXXXXXXXXXXXX 302
+ R +A+ + L + K + + ++T L K+++D H
Sbjct: 467 GTPRGKKDAA-TALFNLCIYHGNKGRAVRAGIVTALVKMLSDSTRHRMVDEALTILSVLA 525
Query: 303 XXXXXXTVLITEKAL-RLVEILSTTKQGRMEICQDAALLNGVVQKMLKTAQEAVSSSNVL 361
+ ++ L L+ IL T + E +AA ++ + K E + + L
Sbjct: 526 NNQDAKSAIVKANTLPALIGILQTDQTRNRE---NAA---AILLSLCKRDTEKLITIGRL 579
Query: 362 TKILLLMQ--SNCTPAVRQMSADLLKIFRVNYKSC 394
++ LM N T ++ + LL++ R K+C
Sbjct: 580 GAVVPLMDLSKNGTERGKRKAISLLELLR---KAC 611
>UNIPROTKB|Q6EUK7 [details] [associations]
symbol:PUB4 "U-box domain-containing protein 4"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AP008208
EMBL:CM000139 GO:GO:0000151 EMBL:AP004030 EMBL:AK062592
RefSeq:NP_001046379.1 UniGene:Os.5133 ProteinModelPortal:Q6EUK7
EnsemblPlants:LOC_Os02g13960.1 GeneID:4328818
KEGG:dosa:Os02t0234300-01 KEGG:osa:4328818 Gramene:Q6EUK7
eggNOG:NOG329430 HOGENOM:HOG000238412 OMA:ENRAYIA
ProtClustDB:CLSN2692596 Uniprot:Q6EUK7
Length = 728
Score = 256 (95.2 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 82/290 (28%), Positives = 137/290 (47%)
Query: 4 DDLYITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEF 63
DD +VP F CPISLD+M+ PV TG TYDR SI +W++ G++TCP + Q L
Sbjct: 291 DDTSFSVPKEFSCPISLDLMRDPVVASTGQTYDRPSIIQWIEEGHSTCPNSGQTLADHRL 350
Query: 64 VPNRTLQRLIQIWSDSVQHRVDSSESATGRP--VVLS------QDEVKDIIRVAISKNED 115
VPNR L+ LI W + DS ES G V S + K R+ + ED
Sbjct: 351 VPNRALRSLISQWCGVYGLQYDSPESNEGMAECVAASCSSRAAMEANKATARILVRMLED 410
Query: 116 FSENLTKIVA-----FAKESDENKTFLAKFDGLVVMLVEILSNVNDVNMLKQVIRVLDLI 170
SEN+ + A AK +N+ F+A G + +L +L + ND + + L L
Sbjct: 411 GSENVKAVAAKEIRLLAKTGKQNRAFIADL-GAIPLLCRLLLS-NDWMAQENAVTAL-LN 467
Query: 171 LNKIEDQQHLMNLILKRDQDCLNSLLLVLKQQESVDSRIESLRLLEFIAGDADSKVKIAE 230
L+ E + I++++ CL ++ VL+ + +++ + L ++ + K I
Sbjct: 468 LSIFEPNK---GRIMEQE-GCLRLIVGVLQNGWTTEAKENAAATLFSLSVVHNFKKLIMN 523
Query: 231 RDGLLAETVKSLSLDSDRRLIEASLSCLITISSSKRAKTKLINHKLITEL 280
G + E L+ + R +A ++ L +S+ + +++ + L
Sbjct: 524 EPGAVEELASMLTKGTSRGKKDAVMA-LFNLSTHPESSARMLESCAVVAL 572
>TAIR|locus:2013990 [details] [associations]
symbol:AT1G71020 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC016972
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AC008148 HOGENOM:HOG000238412 EMBL:AY075626 EMBL:AY142062
EMBL:AK220971 IPI:IPI00534706 PIR:E96734 RefSeq:NP_177258.3
UniGene:At.43068 HSSP:Q8VZ40 ProteinModelPortal:Q9C9A6 SMR:Q9C9A6
IntAct:Q9C9A6 PaxDb:Q9C9A6 PRIDE:Q9C9A6 EnsemblPlants:AT1G71020.1
GeneID:843442 KEGG:ath:AT1G71020 TAIR:At1g71020 eggNOG:NOG261082
InParanoid:Q9C9A6 OMA:FQARESS PhylomeDB:Q9C9A6
ProtClustDB:CLSN2681864 Genevestigator:Q9C9A6 Uniprot:Q9C9A6
Length = 628
Score = 252 (93.8 bits), Expect = 5.8e-19, P = 5.8e-19
Identities = 81/290 (27%), Positives = 139/290 (47%)
Query: 8 ITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNR 67
+T+P F CPISL++MK P + TG TY+R+ IQRW+D GN +CP T Q L++ PN
Sbjct: 241 LTIPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPKTQQKLENFTLTPNY 300
Query: 68 TLQRLIQIWSDSVQHRVDSSESATGRPVVLSQDEVKDI------IRVAISKN-----EDF 116
L+ LI W +H ++ S +D+ IR + K ED
Sbjct: 301 VLRSLISQWC--TKHNIEQPGGYMNGRTKNSDGSFRDLSGDMSAIRALVCKLSSQSIEDR 358
Query: 117 SENLTKIVAFAKESDENKTFLAKFDGLVVMLVEILSNVNDVNMLKQVIRVLDLILNKIED 176
+++I + +K S +N+ +A+ G + +LV++L++ D + + ILN +
Sbjct: 359 RTAVSEIRSLSKRSTDNRILIAEA-GAIPVLVKLLTSDGDTETQENAVTC---ILN-LSI 413
Query: 177 QQHLMNLILKRDQDCLNSLLLVLKQQESVDSRIESLRLLEFIAGDADSKVKIAERDGLLA 236
+H LI+ + S++LVL+ S+++R + L F AD I G +
Sbjct: 414 YEHNKELIMLAG--AVTSIVLVLRAG-SMEARENAAATL-FSLSLADENKIIIGASGAIM 469
Query: 237 ETVKSLSLDSDRRLIEASLSCLITISSSKRAKTKLINHKLITELGKLITD 286
V L S R +A+ + L + + K + + ++ L K++TD
Sbjct: 470 ALVDLLQYGSVRGKKDAA-TALFNLCIYQGNKGRAVRAGIVKPLVKMLTD 518
>TAIR|locus:2082682 [details] [associations]
symbol:PUB14 "plant U-box 14" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;ISS] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0070696 "transmembrane receptor protein
serine/threonine kinase binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0046777 "protein autophosphorylation"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 EMBL:AL049655
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HOGENOM:HOG000238412
eggNOG:NOG242845 OMA:KTGSPRN EMBL:AY065279 EMBL:AY096530
IPI:IPI00539579 PIR:T06735 RefSeq:NP_191045.2 UniGene:At.28098
PDB:1T1H PDBsum:1T1H ProteinModelPortal:Q8VZ40 SMR:Q8VZ40
IntAct:Q8VZ40 STRING:Q8VZ40 PaxDb:Q8VZ40 PRIDE:Q8VZ40
EnsemblPlants:AT3G54850.1 GeneID:824650 KEGG:ath:AT3G54850
TAIR:At3g54850 InParanoid:Q8VZ40 PhylomeDB:Q8VZ40
ProtClustDB:CLSN2690608 EvolutionaryTrace:Q8VZ40
Genevestigator:Q8VZ40 GermOnline:AT3G54850 Uniprot:Q8VZ40
Length = 632
Score = 251 (93.4 bits), Expect = 7.6e-19, P = 7.6e-19
Identities = 99/394 (25%), Positives = 183/394 (46%)
Query: 10 VPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNRTL 69
+P +FRCPISL++MK PV + TG TY+R+SIQ+WLD+G+ TCP + + L PN L
Sbjct: 248 IPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPNYVL 307
Query: 70 QRLIQIWSDSVQHRVDSSESATGRPVVLSQDEVKDIIRV-AISKNEDFSENLTK------ 122
+ LI +W +S + ++ + R + D R +S E + T+
Sbjct: 308 KSLIALWCESNGIELPQNQGSC-RTTKIGGSSSSDCDRTFVLSLLEKLANGTTEQQRAAA 366
Query: 123 --IVAFAKESDENKTFLAKFDGLVVMLVEILSNVNDVNMLKQVIRVLDLILNKIEDQQHL 180
+ AK + +N+ +A+ G + +LVE+LS+ + V +L+L +N E +
Sbjct: 367 GELRLLAKRNVDNRVCIAEA-GAIPLLVELLSSPDPRTQEHSVTALLNLSIN--EGNK-- 421
Query: 181 MNLILKRDQDCLNSLLLVLKQQESVDSRIESLRLLEFIAGDADSKVKIAERDGLLAETVK 240
I+ D + ++ VLK S+++R + L ++ ++KV I + A +
Sbjct: 422 -GAIV--DAGAITDIVEVLKNG-SMEARENAAATLFSLSVIDENKVAIGAAGAIQA--LI 475
Query: 241 SLSLDSDRRLIEASLSCLITISSSKRAKTKLINHKLITELGKLITD-GHXXXXXXXXXXX 299
SL + RR + + + + + + K++ + ++ L +L+ D G
Sbjct: 476 SLLEEGTRRGKKDAATAIFNLCIYQGNKSRAVKGGIVDPLTRLLKDAGGGMVDEALAILA 535
Query: 300 XXXXXXXXXTVLITEKALR-LVEILSTTKQGRMEICQDAALL----NGVVQKMLKTAQEA 354
T + +++ LVEI+ T E AA+L G +++ L A+E
Sbjct: 536 ILSTNQEGKTAIAEAESIPVLVEIIRTGSPRNRE--NAAAILWYLCIGNIER-LNVAREV 592
Query: 355 VSSSNVLTKILLLMQSNCTPAVRQMSADLLKIFR 388
++V K L N T ++ +A LL++ +
Sbjct: 593 --GADVALKELT---ENGTDRAKRKAASLLELIQ 621
>TAIR|locus:2162276 [details] [associations]
symbol:PUB15 "Plant U-Box 15" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0006944 "cellular membrane
fusion" evidence=RCA] [GO:0030048 "actin filament-based movement"
evidence=RCA] [GO:0048610 "cellular process involved in
reproduction" evidence=RCA] [GO:0048868 "pollen tube development"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AB016888 GO:GO:0000151 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK175585 IPI:IPI00547462 RefSeq:NP_199049.2
UniGene:At.51075 ProteinModelPortal:Q681N2 SMR:Q681N2 PaxDb:Q681N2
PRIDE:Q681N2 EnsemblPlants:AT5G42340.1 GeneID:834240
KEGG:ath:AT5G42340 TAIR:At5g42340 eggNOG:NOG263115
InParanoid:Q681N2 OMA:CCHDGSK PhylomeDB:Q681N2
ProtClustDB:CLSN2681658 Genevestigator:Q681N2 Uniprot:Q681N2
Length = 660
Score = 237 (88.5 bits), Expect = 3.8e-17, P = 3.8e-17
Identities = 74/280 (26%), Positives = 140/280 (50%)
Query: 8 ITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNR 67
+ +P F CPI+L++M PV + TG TY++ SIQ+W D+G+ TCP T Q L PN
Sbjct: 288 LILPHEFLCPITLEIMLDPVIIATGQTYEKESIQKWFDAGHKTCPKTRQELDHLSLAPNF 347
Query: 68 TLQRLIQIWSDSVQHRVDSSESATGRPVVLSQDEVKDIIR-VAISKNEDFSENLTKIVAF 126
L+ LI W + ++ E + +DEV ++ ++ S+ E+ ++ ++
Sbjct: 348 ALKNLIMQWCEKNNFKIPEKEVSPDSQNE-QKDEVSLLVEALSSSQLEEQRRSVKQMRLL 406
Query: 127 AKESDENKTFLAKFDGLVVMLVEILSNVNDVNMLKQVIRVLDLILNKIEDQQHLMNLILK 186
A+E+ EN+ +A G + +LV++LS D + + + L LN D+ +N L
Sbjct: 407 ARENPENRVLIANA-GAIPLLVQLLS-YPDSGIQENAVTTL---LNLSIDE---VNKKLI 458
Query: 187 RDQDCLNSLLLVLKQQESVDSRIESLRLLEFIAGDADSKVKIAERDGLLAETVKSLSLDS 246
++ + +++ +L+ ++R S L ++ ++KV I +G+ V L +
Sbjct: 459 SNEGAIPNIIEILENGNR-EARENSAAALFSLSMLDENKVTIGLSNGI-PPLVDLLQHGT 516
Query: 247 DRRLIEASLSCLITISSSKRAKTKLINHKLITELGKLITD 286
R +A L+ L +S + K + I+ ++ L L+ D
Sbjct: 517 LRGKKDA-LTALFNLSLNSANKGRAIDAGIVQPLLNLLKD 555
>UNIPROTKB|Q0IMG9 [details] [associations]
symbol:SPL11 "E3 ubiquitin-protein ligase SPL11"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0031348 "negative regulation of
defense response" evidence=IMP] [GO:0043069 "negative regulation of
programmed cell death" evidence=IMP] [GO:0048586 "regulation of
long-day photoperiodism, flowering" evidence=IMP]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
GO:GO:0006952 SUPFAM:SSF48371 GO:GO:0031348 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0043069 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0009908 GO:GO:0004842 GO:GO:0000151
EMBL:DP000011 EMBL:AP008218 GO:GO:0048586 eggNOG:NOG242845
EMBL:AY652589 EMBL:AY652590 EMBL:AK105835 RefSeq:NP_001067077.2
UniGene:Os.21174 ProteinModelPortal:Q0IMG9 SMR:Q0IMG9
GeneID:4352575 KEGG:dosa:Os03t0275900-01 KEGG:dosa:Os12t0570000-01
KEGG:osa:4352575 Gramene:Q0IMG9 Uniprot:Q0IMG9
Length = 694
Score = 234 (87.4 bits), Expect = 9.3e-17, P = 9.3e-17
Identities = 79/288 (27%), Positives = 140/288 (48%)
Query: 4 DDLYITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEF 63
D IT+P FRCPISL++MK PV + TG TY+RA I++W+ SG++TCP T Q + +
Sbjct: 267 DSRPITIPDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSAL 326
Query: 64 VPNRTLQRLIQIWSDSVQHRVDSSESATGRPVVLSQDEVKDIIRVAISK--NEDFSENLT 121
PN L+ LI W ++ + +P + I +SK + D E +
Sbjct: 327 TPNYVLRSLISQWCETNGMEPPKRSTQPNKPTPACSSSERANIDALLSKLCSPDTEEQRS 386
Query: 122 ---KIVAFAKESDENKTFLAKFDGLVVMLVEILSNVNDVNMLKQVIRVLDLILNKIEDQQ 178
++ AK + N+ +A+ G + +L+ +LS+ +D+ + + L L L+ ED +
Sbjct: 387 AAAELRLLAKRNANNRICIAEA-GAIPLLLSLLSS-SDLRTQEHAVTAL-LNLSIHEDNK 443
Query: 179 HLMNLILKRDQDCLNSLLLVLKQQESVDSRIESLRLLEFIAGDADSKVKIAERDGLLAET 238
++I + S++ VLK S+++R + L ++ + KV I G +
Sbjct: 444 --ASII---SSGAVPSIVHVLKNG-SMEARENAAATLFSLSVIDEYKVTIGGM-GAIPAL 496
Query: 239 VKSLSLDSDRRLIEASLSCLITISSSKRAKTKLINHKLITELGKLITD 286
V L S R +A+ + L + + K + I L+ + L+T+
Sbjct: 497 VVLLGEGSQRGKKDAA-AALFNLCIYQGNKGRAIRAGLVPLIMGLVTN 543
>TAIR|locus:2181077 [details] [associations]
symbol:SAUR21 "SMALL AUXIN UP RNA 21" species:3702
"Arabidopsis thaliana" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AL162351
HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:BT015367 EMBL:BT015725
EMBL:AK229397 IPI:IPI00524109 PIR:T48204 RefSeq:NP_195803.1
UniGene:At.33496 ProteinModelPortal:Q9LZW3 SMR:Q9LZW3 PRIDE:Q9LZW3
EnsemblPlants:AT5G01830.1 GeneID:831850 KEGG:ath:AT5G01830
TAIR:At5g01830 eggNOG:NOG307369 InParanoid:Q9LZW3 OMA:IPADFRC
PhylomeDB:Q9LZW3 ProtClustDB:CLSN2687143 Genevestigator:Q9LZW3
Uniprot:Q9LZW3
Length = 674
Score = 230 (86.0 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 64/215 (29%), Positives = 107/215 (49%)
Query: 10 VPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNRTL 69
+P+ FRCPI+L++M+ PV + TG TYDR SI W+ SG+NTCP T QVL+ VPNR L
Sbjct: 274 IPADFRCPITLELMRDPVVVATGQTYDRESIDLWIQSGHNTCPKTGQVLKHTSLVPNRAL 333
Query: 70 QRLIQIWSDSVQHRVDSSESATGRPVVLSQ--DEVKDIIRVAISKNEDFSEN--LTKIVA 125
+ LI +W + + G P + + K ++ I K N + ++ A
Sbjct: 334 KNLIVLWCRDQKIPFELYGDGGGEPAPCKEAVEFTKMMVSFLIEKLSVADSNGVVFELRA 393
Query: 126 FAKESDENKTFLAKFDGLVVMLVEILSNVNDVNMLKQVIRVLDLILNKIEDQQHLMNLIL 185
AK + +A+ G + LV L+ + V +L+L + +E + I+
Sbjct: 394 LAKSDTVARACIAEA-GAIPKLVRYLATECPSLQINAVTTILNLSI--LEQNK---TRIM 447
Query: 186 KRDQDCLNSLLLVLKQQESVDSRIESLRLLEFIAG 220
+ D LN ++ VL+ + +++ + L +AG
Sbjct: 448 ETD-GALNGVIEVLRSGATWEAKANAAATLFSLAG 481
>TAIR|locus:2075140 [details] [associations]
symbol:PUB13 "plant U-box 13" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0016567
"protein ubiquitination" evidence=IEA;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] [GO:0042742 "defense response to bacterium"
evidence=IGI] [GO:0000902 "cell morphogenesis" evidence=RCA]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
[GO:0006499 "N-terminal protein myristoylation" evidence=RCA]
[GO:0016049 "cell growth" evidence=RCA] [GO:0032880 "regulation of
protein localization" evidence=RCA] [GO:0046777 "protein
autophosphorylation" evidence=RCA] [GO:0048193 "Golgi vesicle
transport" evidence=RCA] [GO:0048767 "root hair elongation"
evidence=RCA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0042742 EMBL:AL133314
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY042791 EMBL:AY128813
IPI:IPI00531350 PIR:T45588 RefSeq:NP_190235.1 UniGene:At.23070
ProteinModelPortal:Q9SNC6 SMR:Q9SNC6 STRING:Q9SNC6 PaxDb:Q9SNC6
PRIDE:Q9SNC6 EnsemblPlants:AT3G46510.1 GeneID:823804
KEGG:ath:AT3G46510 TAIR:At3g46510 eggNOG:NOG269633
InParanoid:Q9SNC6 OMA:DSRIQEH PhylomeDB:Q9SNC6
ProtClustDB:CLSN2684834 Genevestigator:Q9SNC6 Uniprot:Q9SNC6
Length = 660
Score = 225 (84.3 bits), Expect = 9.4e-16, P = 9.4e-16
Identities = 78/285 (27%), Positives = 143/285 (50%)
Query: 10 VPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNRTL 69
+P FRCPISL++M+ PV + +G TY+R I++W++ G++TCP T Q L S PN L
Sbjct: 256 IPDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHSTCPKTQQALTSTTLTPNYVL 315
Query: 70 QRLIQIWSDSVQHRVDSSESATGRPVVLSQ-------DEVKDII-RVAISKNEDFSENLT 121
+ LI W ++ S+ RP +S ++++D++ R+A ED
Sbjct: 316 RSLIAQWCEANDIEPPKPPSSL-RPRKVSSFSSPAEANKIEDLMWRLAYGNPEDQRSAAG 374
Query: 122 KIVAFAKESDENKTFLAKFDGLVVMLVEILSNVNDVNMLKQVIRVLDLILNKIEDQQHLM 181
+I AK + +N+ +A+ G + +LV +LS D + + + L L L+ E+ +
Sbjct: 375 EIRLLAKRNADNRVAIAEA-GAIPLLVGLLSTP-DSRIQEHSVTAL-LNLSICENNK--- 428
Query: 182 NLILKRDQDCLNSLLLVLKQQESVDSRIESLRLLEFIAGDADSKVKIAERDGLLAETVKS 241
I+ + ++ VLK+ S+++R + L ++ ++KV I G + V
Sbjct: 429 GAIVSAG--AIPGIVQVLKKG-SMEARENAAATLFSLSVIDENKVTIGAL-GAIPPLVVL 484
Query: 242 LSLDSDRRLIEASLSCLITISSSKRAKTKLINHKLITELGKLITD 286
L+ + R +A+ + L + + K K I +I L +L+T+
Sbjct: 485 LNEGTQRGKKDAA-TALFNLCIYQGNKGKAIRAGVIPTLTRLLTE 528
>TAIR|locus:2141226 [details] [associations]
symbol:PUB8 "plant U-box 8" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA;NAS] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00184 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL161554 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:EF637083 EMBL:AL031187 EMBL:EF182720 HSSP:Q8VZ40
IPI:IPI00526364 PIR:T05177 RefSeq:NP_193866.1 UniGene:At.65012
ProteinModelPortal:O81902 SMR:O81902 PaxDb:O81902
EnsemblPlants:AT4G21350.1 GeneID:827885 KEGG:ath:AT4G21350
TAIR:At4g21350 eggNOG:NOG271823 HOGENOM:HOG000272744
InParanoid:O81902 OMA:LCKLPEN PhylomeDB:O81902
ProtClustDB:CLSN2685551 ArrayExpress:O81902 Genevestigator:O81902
Uniprot:O81902
Length = 374
Score = 219 (82.2 bits), Expect = 9.6e-16, P = 9.6e-16
Identities = 74/267 (27%), Positives = 132/267 (49%)
Query: 10 VPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEF-VPNRT 68
+P+ FRCPISL++M PV L +G T+DR SIQ+W+DSGN TCP T L + +PN
Sbjct: 5 LPNDFRCPISLEIMSDPVILQSGHTFDRVSIQQWIDSGNRTCPITKLPLSETPYLIPNHA 64
Query: 69 LQRLIQIWSDSVQHRVDSSESATGRPVVLSQDE--VKDIIRVAISKNEDFSENLTKIVAF 126
L+ LI ++ V + +SS T + SQ + + ++ + S N E+LT++V
Sbjct: 65 LRSLILNFAH-VSLK-ESSRPRTQQEHSHSQSQALISTLVSQS-SSNASKLESLTRLVRL 121
Query: 127 AKESDENKTFLAKFDGLVVMLVEILSNVNDVNMLKQVIRVLDLILNKIEDQQHLMNLILK 186
K + + + G V ++ + + N V L++ + L L+LN + + + L+
Sbjct: 122 TKRDSSIRRKVTE-SGAVRAALDCVDSCNQV--LQE--KSLSLLLNLSLEDDNKVGLVA- 175
Query: 187 RDQDCLNSLLLVLKQQESVDSRIESLRLLEFIAGDADSKVKIAERDGLLAETVKSLSLDS 246
+ ++ VL+ S D + + LL +A +K I ++ V L + +
Sbjct: 176 --DGVIRRIVTVLRVG-SPDCKAIAATLLTSLAVVEVNKATIGSYPDAISALVSLLRVGN 232
Query: 247 DRRLIEASLSCLITISSSKRAKTKLIN 273
DR E S + L + S + ++++
Sbjct: 233 DRERKE-SATALYALCSFPDNRKRVVD 258
>UNIPROTKB|Q5VRH9 [details] [associations]
symbol:PUB12 "U-box domain-containing protein 12"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AP008212
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 EMBL:AP002842 EMBL:AK067611 EMBL:AK071080
RefSeq:NP_001056535.2 UniGene:Os.11259 ProteinModelPortal:Q5VRH9
EnsemblPlants:LOC_Os06g01304.1 GeneID:4339839 KEGG:osa:4339839
Gramene:Q5VRH9 eggNOG:NOG242845 OMA:KTGSPRN ProtClustDB:CLSN2695872
Uniprot:Q5VRH9
Length = 611
Score = 215 (80.7 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 70/283 (24%), Positives = 134/283 (47%)
Query: 10 VPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNRTL 69
+P FRCPISL++M+ PV + +G TY+R+ IQ+WLDSG+ TCP T Q L PN L
Sbjct: 228 IPDEFRCPISLELMQDPVIVSSGQTYERSCIQKWLDSGHKTCPKTQQPLSHTSLTPNFVL 287
Query: 70 QRLIQIWSDS-----VQHRVDSSESATGRPVVLSQDEVKDIIRVAISKNEDFSENLT-KI 123
+ LI W ++ +++ +S + + + ++ S N+D +I
Sbjct: 288 KSLISQWCEANGIELPKNKQNSRDKKAAKSSDYDHAGLVSLMNRLRSGNQDEQRAAAGEI 347
Query: 124 VAFAKESDENKTFLAKFDGLVVMLVEILSNVNDVNMLKQVIRVLDLILNKIEDQQHLMNL 183
AK + N+ +A+ G + +LV +LS+ +D + + L LN + + ++
Sbjct: 348 RLLAKRNVNNRICIAEA-GAIPLLVNLLSS-SDPRTQEHAVTAL---LNLSIHENNKASI 402
Query: 184 ILKRDQDCLNSLLLVLKQQESVDSRIESLRLLEFIAGDADSKVKIAERDGLLAETVKSLS 243
+ D + ++ VLK S+++R + L ++ ++KV I G + + L
Sbjct: 403 V---DSHAIPKIVEVLKTG-SMETRENAAATLFSLSVVDENKVTIGAA-GAIPPLINLLC 457
Query: 244 LDSDRRLIEASLSCLITISSSKRAKTKLINHKLITELGKLITD 286
S R +A+ + + + + K + + ++ L + D
Sbjct: 458 DGSPRGKKDAA-TAIFNLCIYQGNKVRAVKAGIVIHLMNFLVD 499
>TAIR|locus:2079706 [details] [associations]
symbol:PUB9 "plant U-box 9" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] [GO:0071215 "cellular response to abscisic
acid stimulus" evidence=IMP] [GO:0046777 "protein
autophosphorylation" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005886 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 GO:GO:0009738
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0071215 GO:GO:0004842 GO:GO:0000151
EMBL:AC009853 HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY075636
IPI:IPI00538175 RefSeq:NP_566304.1 UniGene:At.21635
ProteinModelPortal:Q9SRT0 SMR:Q9SRT0 STRING:Q9SRT0 PaxDb:Q9SRT0
PRIDE:Q9SRT0 EnsemblPlants:AT3G07360.1 GeneID:819924
KEGG:ath:AT3G07360 TAIR:At3g07360 eggNOG:NOG271821
InParanoid:Q9SRT0 OMA:LIREMIS PhylomeDB:Q9SRT0
ProtClustDB:CLSN2917129 Genevestigator:Q9SRT0 Uniprot:Q9SRT0
Length = 460
Score = 209 (78.6 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 66/287 (22%), Positives = 130/287 (45%)
Query: 8 ITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNR 67
++ P FRCP+S ++M+ PV L +G TYD+ IQ+WL SGN TCP T QVL PN
Sbjct: 72 VSCPEEFRCPLSNELMRDPVVLASGQTYDKLFIQKWLSSGNRTCPKTQQVLPHTALTPNL 131
Query: 68 TLQRLIQIW--SDSVQHRVDSSESATGRP--VVLSQDEVKD--IIRVAISKNEDFSENLT 121
++ +I W + ++ + + V S E+ + + +V+ S +D
Sbjct: 132 LIREMISKWCKKNGLETKSQYHPNLVNEDETVTRSDREIFNSLLCKVSSSNLQDQKSAAK 191
Query: 122 KIVAFAKESDENKTFLAKFDGLVVMLVE-ILSNVNDVNMLKQVIRVLDLILNKIEDQQHL 180
++ ++ E + + + LV +L N L++ + V L+ I D +
Sbjct: 192 ELRLLTRKGTEFRALFGESPDEITRLVNPLLHGSNPDEKLQEDV-VTTLLNISIHDDSN- 249
Query: 181 MNLILKRDQDCLNSLLLVLKQQESVDSRIESLRLLEFIAGDADSKVKIAERDGLLAETVK 240
L+ + + LL+ ++ +V +R + + F DS + + G+L +
Sbjct: 250 KKLVCENPN--VIPLLIDALRRGTVATRSNAAAAI-FTLSALDSNKVLIGKSGILKPLID 306
Query: 241 SLSLDSDRRLIEASLSCLITISSSKRAKTKLINHKLITELGKLITDG 287
L + + I+ + + T+ + +++ + + LGK I++G
Sbjct: 307 LLE-EGNPLAIKDVAAAIFTLCIAHENRSRAVRDGAVRVLGKKISNG 352
>TAIR|locus:2102455 [details] [associations]
symbol:AT3G54790 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AL138650 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK118613 IPI:IPI00538000 PIR:T47638
RefSeq:NP_191039.2 UniGene:At.1218 UniGene:At.48768
ProteinModelPortal:Q8GWV5 SMR:Q8GWV5 PaxDb:Q8GWV5 PRIDE:Q8GWV5
EnsemblPlants:AT3G54790.1 GeneID:824644 KEGG:ath:AT3G54790
TAIR:At3g54790 eggNOG:NOG259040 InParanoid:Q8GWV5 OMA:LSHFRNQ
PhylomeDB:Q8GWV5 ProtClustDB:CLSN2680413 Genevestigator:Q8GWV5
Uniprot:Q8GWV5
Length = 760
Score = 194 (73.4 bits), Expect = 3.1e-13, Sum P(3) = 3.1e-13
Identities = 32/72 (44%), Positives = 51/72 (70%)
Query: 8 ITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNR 67
I++P +FRCP+S ++M PV + +G T+DR SI++WLD+G CP T QVL +E +PN
Sbjct: 236 ISIPPYFRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPRTRQVLTHQELIPNY 295
Query: 68 TLQRLIQIWSDS 79
T++ +I W ++
Sbjct: 296 TVKAMIASWLEA 307
Score = 47 (21.6 bits), Expect = 3.1e-13, Sum P(3) = 3.1e-13
Identities = 15/67 (22%), Positives = 34/67 (50%)
Query: 312 ITEKALRLVEILSTTKQGRMEICQDAALLNGVVQKMLKTAQEAVSSSNVLTKILLLMQSN 371
+ +KA+ L+ LS +GR I ++ + V L + + ++++VL ++ L
Sbjct: 653 MVDKAVALLANLSAVGEGRQAIVREGGIPLLVETVDLGSQRGKENAASVLLQLCLNSPKF 712
Query: 372 CTPAVRQ 378
CT +++
Sbjct: 713 CTLVLQE 719
Score = 45 (20.9 bits), Expect = 3.1e-13, Sum P(3) = 3.1e-13
Identities = 27/118 (22%), Positives = 48/118 (40%)
Query: 145 VMLVEILSNVNDVNMLKQVIRVLDLILNKIEDQQHLMNLILKRDQDCLNSLLLVLKQQES 204
+ LVE L + ++ + L +N IE++ H+ + LL +L +E
Sbjct: 475 IKLVEDLKSGSNKVKTAAAAEIRHLTINSIENRVHIGRC------GAITPLLSLLYSEEK 528
Query: 205 VDSRIESLRLLEFIAGDADSKVKIAERDGLLAETVKSLSLDSDRRLIEASLSCLITIS 262
+ LL + + K I E G + V L+ +DR E S + L ++S
Sbjct: 529 LTQEHAVTALLNLSISELN-KAMIVEV-GAIEPLVHVLNTGNDRAK-ENSAASLFSLS 583
>TAIR|locus:2010424 [details] [associations]
symbol:PUB45 "plant U-box 45" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0019894 "kinesin binding" evidence=IEA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC069471
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HSSP:Q8VZ40 EMBL:AY094469 EMBL:BT002721 EMBL:AK230080
IPI:IPI00517206 PIR:D86404 RefSeq:NP_174112.1 UniGene:At.22435
ProteinModelPortal:Q9C7G1 SMR:Q9C7G1 PRIDE:Q9C7G1
EnsemblPlants:AT1G27910.1 GeneID:839684 KEGG:ath:AT1G27910
TAIR:At1g27910 eggNOG:NOG251146 HOGENOM:HOG000082565
InParanoid:Q9C7G1 OMA:SENMSIP PhylomeDB:Q9C7G1
ProtClustDB:CLSN2679347 Genevestigator:Q9C7G1 Uniprot:Q9C7G1
Length = 768
Score = 189 (71.6 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 72/262 (27%), Positives = 113/262 (43%)
Query: 11 PSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNRTLQ 70
P RCPISL +M PV + +G TY+R I++W G+NTCP T Q L PN ++
Sbjct: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWFSDGHNTCPKTHQQLSHLCLTPNYCVK 339
Query: 71 RLIQIWSDS--VQHRVDSSESATGR--PVVLSQDEVKDII---RVAISKNEDFSENLTKI 123
LI W + VQ ES + LS E D RV K +D +
Sbjct: 340 ALISSWCEQNGVQVPDGPPESLDLNYWRLALSVSESTDTRSAKRVGSCKLKDVKVVPLEE 399
Query: 124 VAFAKESDENKTFLAKFDGLVVMLVEILSNVNDVNMLKQVIRVLDLILNKIEDQQHLMNL 183
KE + LV E+L+ + DV+ L++ RV++ I ++D +
Sbjct: 400 SGTIKEEACESEYQEDQVTLVERCTELLTTLTDVDTLRKKCRVVEQIRVLLKDDEEAR-- 457
Query: 184 ILKRDQDCLNSLLL----VLKQQESVDSRIESLRLLEFIAGDADSKVKIAERDG---LLA 236
IL + C+ +LL L + + ++ ++ L +A D + ++ G LL
Sbjct: 458 ILMGENGCVEALLQFLGSALNENNASAQKVGAMALFN-LAVDNNRNKELMLASGIIPLLE 516
Query: 237 ETVKSLSLDSDRRLIEASLSCL 258
E + + I +LSCL
Sbjct: 517 EMLCNPHSHGSVTAIYLNLSCL 538
Score = 39 (18.8 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 314 EKALRLVEILSTTKQGRMEICQDAALLNGVVQKML 348
E+A+ L+ IL EIC + L GV+ ++
Sbjct: 651 EQAVSLLLILCN----HSEICSEMVLQEGVIPSLV 681
>TAIR|locus:2008813 [details] [associations]
symbol:AT1G67530 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC011020 HSSP:Q8VZ40
HOGENOM:HOG000082565 ProtClustDB:CLSN2679347 EMBL:AK117197
EMBL:BT006484 IPI:IPI00538541 PIR:G96698 RefSeq:NP_001154455.1
RefSeq:NP_176920.1 UniGene:At.35639 UniGene:At.66850
ProteinModelPortal:Q9CAG5 SMR:Q9CAG5 IntAct:Q9CAG5 PaxDb:Q9CAG5
PRIDE:Q9CAG5 EnsemblPlants:AT1G67530.1 EnsemblPlants:AT1G67530.2
GeneID:843074 KEGG:ath:AT1G67530 TAIR:At1g67530 eggNOG:NOG240771
InParanoid:Q9CAG5 OMA:GELENTR PhylomeDB:Q9CAG5
Genevestigator:Q9CAG5 Uniprot:Q9CAG5
Length = 782
Score = 177 (67.4 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 67/253 (26%), Positives = 120/253 (47%)
Query: 11 PSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNRTLQ 70
P RCPISL +M PV + +G TY+R I++W G+NTCP T Q L PN ++
Sbjct: 273 PEELRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQQLPHISLTPNNCVK 332
Query: 71 RLIQIWSDSVQHRVDSSESATGRPVVLSQDEVKDIIRVAISKNEDF-SENLTKIVAFAKE 129
LI W + + ++ +G P SQD D R+A+S +E S+++ I ++ +
Sbjct: 333 GLIASWCEQ-----NGTQIPSGPPE--SQD--LDYWRLALSDSESTKSQSVNSIGSYKLK 383
Query: 130 S------DENKTFLAKFDGLVVMLVEILSNV--NDVNMLKQVIRVLDLILNKIEDQQHLM 181
+EN T + + V + +D+N+L++ +L +LN+ E +
Sbjct: 384 GVKIVPLEENGTTVVERQNTEESFVSDDDDEEDSDINVLERYQDLL-AVLNEEEGLEKKC 442
Query: 182 NLILKRDQDCLNSLLLVLKQQESV------DSRIESLRLLEFIAGDADSKVKIAERDGLL 235
++ K + L+LK E + +E+L L F+ D A+ G +
Sbjct: 443 KVVEK--------IRLLLKDDEEARIFMGANGFVEAL--LRFLGSAVDDNNAAAQDSGAM 492
Query: 236 AETVKSLSLDSDR 248
A + +L+++++R
Sbjct: 493 A--LFNLAVNNNR 503
Score = 48 (22.0 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 21/70 (30%), Positives = 32/70 (45%)
Query: 319 LVEILSTTKQGRMEICQDAALLNGVVQKMLKTAQEAVSSSNVLTKILLLMQSNCTPAVRQ 378
++++ TT+Q + C L NG + QE V S L+ + N TP R+
Sbjct: 644 VLDMGDTTEQEQAVSCL-LILCNGRESCIQMVLQEGVIPS------LVSISVNGTPRGRE 696
Query: 379 MSADLLKIFR 388
S LL +FR
Sbjct: 697 KSQKLLMLFR 706
>TAIR|locus:2158252 [details] [associations]
symbol:AT5G67340 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0000165
"MAPK cascade" evidence=RCA] [GO:0006499 "N-terminal protein
myristoylation" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0006865 "amino acid transport"
evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0006984 "ER-nucleus signaling pathway" evidence=RCA]
[GO:0007154 "cell communication" evidence=RCA] [GO:0009409
"response to cold" evidence=RCA] [GO:0009414 "response to water
deprivation" evidence=RCA] [GO:0009611 "response to wounding"
evidence=RCA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009862 "systemic acquired resistance,
salicylic acid mediated signaling pathway" evidence=RCA]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=RCA] [GO:0031348 "negative regulation of
defense response" evidence=RCA] [GO:0034976 "response to
endoplasmic reticulum stress" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AB007645 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:BT015818 EMBL:BT020206 EMBL:AK229487
IPI:IPI00537014 RefSeq:NP_201535.3 UniGene:At.28815
ProteinModelPortal:Q5XEZ8 SMR:Q5XEZ8 STRING:Q5XEZ8 PaxDb:Q5XEZ8
PRIDE:Q5XEZ8 EnsemblPlants:AT5G67340.1 GeneID:836869
KEGG:ath:AT5G67340 TAIR:At5g67340 eggNOG:NOG269447
InParanoid:Q5XEZ8 OMA:LASWCET PhylomeDB:Q5XEZ8
ProtClustDB:CLSN2681130 Genevestigator:Q5XEZ8 Uniprot:Q5XEZ8
Length = 707
Score = 155 (59.6 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 27/72 (37%), Positives = 42/72 (58%)
Query: 8 ITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNR 67
+ VPS FRC +SL++M PV + +G T++R IQ+W+D G CP T Q L PN
Sbjct: 238 VRVPSDFRCSLSLELMTDPVIVASGQTFERVFIQKWIDMGLMVCPKTRQALSHTTLTPNF 297
Query: 68 TLQRLIQIWSDS 79
++ + W ++
Sbjct: 298 IVRAFLASWCET 309
Score = 64 (27.6 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 18/89 (20%), Positives = 47/89 (52%)
Query: 201 QQESVDSRIESLRLLEFIAGDA-DSKVKIAERDGLLAETVKSLSLDSDRRLIEASLSCLI 259
+ S+D++ E+ + +A ++ D+++ IA + + ++ SL +D R+ +++CL+
Sbjct: 431 KSSSLDTQREATARIRILARNSTDNRIVIARCEAI--PSLVSLLYSTDERIQADAVTCLL 488
Query: 260 TISSSKRAKTKLINHKLITELGKLITDGH 288
+S + K+ + I L ++ G+
Sbjct: 489 NLSINDNNKSLIAESGAIVPLIHVLKTGY 517
Score = 55 (24.4 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
Identities = 14/69 (20%), Positives = 32/69 (46%)
Query: 83 RVDSSESATGRPVVLSQDEVKDIIRVAISKNEDFSENLTKIVAFAKESDENKTFLAKFDG 142
R+ + S R V+ + + ++ + S +E + + +D NK+ +A+ G
Sbjct: 446 RILARNSTDNRIVIARCEAIPSLVSLLYSTDERIQADAVTCLLNLSINDNNKSLIAE-SG 504
Query: 143 LVVMLVEIL 151
+V L+ +L
Sbjct: 505 AIVPLIHVL 513
Score = 44 (20.5 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 15/69 (21%), Positives = 37/69 (53%)
Query: 312 ITEKALRLVEILSTTKQGRMEICQDAAL--LNGVVQKMLKTAQEAVSSSNVLTKILLLMQ 369
+ EKA+ ++ L+T ++G++ I ++ + L VV+ L +A+ +++ L ++
Sbjct: 602 MVEKAVVVLANLATVREGKIAIGEEGGIPVLVEVVE--LGSARGKENATAALLQLCTHSP 659
Query: 370 SNCTPAVRQ 378
C +R+
Sbjct: 660 KFCNNVIRE 668
>TAIR|locus:2032472 [details] [associations]
symbol:AT1G24330 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=IDA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009507 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AC002396
HSSP:Q8VZ40 eggNOG:NOG251146 HOGENOM:HOG000082565
ProtClustDB:CLSN2679347 IPI:IPI00520534 PIR:T00664
RefSeq:NP_173843.2 UniGene:At.41444 ProteinModelPortal:O48700
SMR:O48700 PaxDb:O48700 PRIDE:O48700 EnsemblPlants:AT1G24330.1
GeneID:839049 KEGG:ath:AT1G24330 TAIR:At1g24330 InParanoid:O48700
OMA:RILMGAN PhylomeDB:O48700 Genevestigator:O48700 Uniprot:O48700
Length = 771
Score = 158 (60.7 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 28/68 (41%), Positives = 39/68 (57%)
Query: 11 PSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNRTLQ 70
P RCPISL +M PV + +G TY+R I++W G+N+CP T Q L PN ++
Sbjct: 276 PEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNSCPKTQQQLPHLSLTPNYCVK 335
Query: 71 RLIQIWSD 78
LI W +
Sbjct: 336 GLIASWCE 343
Score = 55 (24.4 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 234 LLAETVKSLSL--DSDRRL-IEASLSCLITISSSKRAKTKLINHK-LITELGKLITDG 287
L + +KSL + + L IE SL+ L+ ++SS+ K ++I + +I+ L ++ G
Sbjct: 590 LSSNIIKSLQVLASTGNHLWIEKSLAVLLNLASSREGKEEMITTQGMISTLATVLDTG 647
Score = 41 (19.5 bits), Expect = 8.4e-08, Sum P(2) = 8.4e-08
Identities = 14/66 (21%), Positives = 32/66 (48%)
Query: 314 EKALRLVEILSTTKQGRMEICQDAALLNGVVQKMLKTAQEAVSSSNVLTKILLLMQS-NC 372
EK+L ++ L+++++G+ E+ +++ + +L T V ++L S +C
Sbjct: 611 EKSLAVLLNLASSREGKEEMITTQGMIS-TLATVLDTGDTVEQEQAVSCLVILCTGSESC 669
Query: 373 TPAVRQ 378
V Q
Sbjct: 670 IQMVLQ 675
>TAIR|locus:2195563 [details] [associations]
symbol:PUB19 "plant U-box 19" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
InterPro:IPR001841 InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00184 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0010029 GO:GO:0004842 GO:GO:0000151
EMBL:AC004473 HOGENOM:HOG000238412 HSSP:Q8VZ40 eggNOG:NOG251934
ProtClustDB:CLSN2679599 IPI:IPI00530780 PIR:T02271
RefSeq:NP_176225.1 UniGene:At.66059 ProteinModelPortal:O80742
SMR:O80742 PaxDb:O80742 PRIDE:O80742 EnsemblPlants:AT1G60190.1
GeneID:842314 KEGG:ath:AT1G60190 TAIR:At1g60190 InParanoid:O80742
OMA:TELHVAM PhylomeDB:O80742 Genevestigator:O80742 Uniprot:O80742
Length = 686
Score = 167 (63.8 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 71/249 (28%), Positives = 120/249 (48%)
Query: 15 RCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNRTLQRLIQ 74
RCPISL++M PV L +G TYDR+SI +W SGN TCP T + L S V N +++++IQ
Sbjct: 283 RCPISLEIMSDPVVLESGHTYDRSSITKWFASGNITCPKTGKTLVSTVLVDNFSVKQVIQ 342
Query: 75 IWS--DSV------QHRVDSSESATGRPV--VLSQDEVKDIIRVAISKNEDFSENLTKIV 124
+S + V + +VD +ES + ++ ++I+ E+ + L +I
Sbjct: 343 SYSKQNGVVMGQKGKKKVDVAESLAAEEAGKLTAEFLAGELIK---GDEEEMVKALVEIR 399
Query: 125 AFAKESDENKTFLAKFDGLVVMLVEILSNVNDVNMLKQVIRVLDLILNKIEDQQHLMNLI 184
K S ++ L + G+V L++IL + +D + + + I+N +D ++
Sbjct: 400 ILTKTSTFYRSCLVEA-GVVESLMKILRS-DDPRIQENAMAG---IMNLSKDIAGKTRIV 454
Query: 185 LKRDQDCLNSLLLVLKQQESVDSRIESLRLLEFIAGDADSKVKIAE-RDGL--LAETVKS 241
D L ++ VL +SR + L +++ D I E D + L VKS
Sbjct: 455 -GEDGGGLRLIVEVLNDGARRESRQYAAAALFYLSSLGDYSRLIGEISDAIPGLVRIVKS 513
Query: 242 LSL-DSDRR 249
DS +R
Sbjct: 514 CDYGDSAKR 522
>TAIR|locus:2194564 [details] [associations]
symbol:PUB18 "plant U-box 18" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;IDA] [GO:0010029 "regulation of seed
germination" evidence=IGI] InterPro:IPR001841 InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00184 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010029 GO:GO:0004842
EMBL:AC007067 GO:GO:0000151 HOGENOM:HOG000238412 HSSP:Q8VZ40
EMBL:AY075683 IPI:IPI00537444 PIR:B86239 RefSeq:NP_172526.1
UniGene:At.14982 ProteinModelPortal:Q9XIJ5 SMR:Q9XIJ5 PRIDE:Q9XIJ5
EnsemblPlants:AT1G10560.1 GeneID:837597 KEGG:ath:AT1G10560
TAIR:At1g10560 eggNOG:NOG251934 InParanoid:Q9XIJ5 OMA:EPSSKHR
PhylomeDB:Q9XIJ5 ProtClustDB:CLSN2679599 Genevestigator:Q9XIJ5
Uniprot:Q9XIJ5
Length = 697
Score = 166 (63.5 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 65/229 (28%), Positives = 111/229 (48%)
Query: 16 CPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNRTLQRLIQ- 74
CPISL++M PV + TG TYDR+SI +W SGN TCP T ++L S E V N +++++I+
Sbjct: 294 CPISLEIMTDPVVIETGHTYDRSSITKWFGSGNITCPITGKILTSTELVDNVSVRQVIRK 353
Query: 75 ------IWSDSVQHR-------VDSSESATGRPVVLSQDEVKDIIRVAISKNEDFSENLT 121
I + R V S +A G ++++ ++I E +
Sbjct: 354 HCKTNGIVLAGISRRRKSHDDVVPESLAAKGAGKLIAKFLTSELIN---GGEEMIYRAVR 410
Query: 122 KIVAFAKESDENKTFLAKFDGLVVMLVEILSNVNDVNMLKQVIRVLDLILNKIEDQQHLM 181
+I K S N++ L K G V L+++LS+V D+ + + + + L L+K H+
Sbjct: 411 EIRVQTKTSSFNRSCLVKA-GAVTPLLKLLSSV-DIRIQENAMAGI-LNLSK-----HVT 462
Query: 182 NLILKRDQDCLNSLLLVLKQQESVDSRIESLRLLEFIAGDADSKVKIAE 230
K + L L+ +L + ++R+ S L +++ D I E
Sbjct: 463 GKS-KIAGEGLKILVEILNEGAKTETRLYSASALFYLSSVEDYSRLIGE 510
>TAIR|locus:2146198 [details] [associations]
symbol:AT5G18330 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
ProtClustDB:CLSN2686550 IPI:IPI00538442 RefSeq:NP_197334.1
UniGene:At.54898 ProteinModelPortal:Q3E9F6 SMR:Q3E9F6
EnsemblPlants:AT5G18330.1 GeneID:831951 KEGG:ath:AT5G18330
TAIR:At5g18330 eggNOG:NOG311548 InParanoid:Q3E9F6 OMA:HERTCPR
PhylomeDB:Q3E9F6 Genevestigator:Q3E9F6 Uniprot:Q3E9F6
Length = 445
Score = 163 (62.4 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 69/285 (24%), Positives = 124/285 (43%)
Query: 8 ITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNR 67
+ VP F C +S +M P+ + +G T++++ I WL TCP T QVL + +PN
Sbjct: 63 VEVPKEFICTLSNKIMIEPMLIASGQTFEKSYILEWLKH-ERTCPRTKQVLYHRFMIPNH 121
Query: 68 TLQRLIQIWSDSVQHRVDSSESATGRPVVLSQDEVKDII-RVAI-SKNEDFSENLTKIVA 125
+ +I+ W + H D +++ + L +++ ++ R++ S ED +E ++
Sbjct: 122 LINEVIKEWC--LIHNFDRPKTSD-EVIDLFTGDLESLLQRISSPSSVEDQTEAAKELAL 178
Query: 126 FAKE-SDENKTFLAKFDGLVVMLVEILSNVNDVN--MLKQVIRVLDLILNKIEDQQHLMN 182
AK S F+AK + L+ LS D N L+ ++ L I + E N
Sbjct: 179 KAKRFSSVCVYFVAKIPDSITRLLTPLSISEDSNPEFLENIVTALH-IFSTSEK-----N 232
Query: 183 LILKRDQDCLNSLLLVLKQQESVDSRIESLRLLEFIAGDADSKVKIAERDGLLAETVKSL 242
L + + LL +Q +V +RI S + ++ +K+ I + L A + +
Sbjct: 233 KTLVAENPLVLPLLAKYMKQGTVLTRIHSAATVNSLSYTDSNKIIIGNSEVLKA-LIHVI 291
Query: 243 SLDSDRRLIEASLSCLITISSSKRAKTKLINHKLITELGKLITDG 287
+ D + S L + K K ++ LI K I G
Sbjct: 292 E-EGDSLATSEAFSALSNLCPVKEISEKAVSEGLIRAAIKKIKAG 335
>TAIR|locus:2045334 [details] [associations]
symbol:PUB4 "plant U-box 4" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019894 "kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 EMBL:CP002685 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 IPI:IPI00532127
RefSeq:NP_179895.6 UniGene:At.39339 ProteinModelPortal:F4ILG6
SMR:F4ILG6 PRIDE:F4ILG6 EnsemblPlants:AT2G23140.1 GeneID:816846
KEGG:ath:AT2G23140 OMA:WRRPSER Uniprot:F4ILG6
Length = 829
Score = 164 (62.8 bits), Expect = 9.2e-09, P = 9.2e-09
Identities = 30/84 (35%), Positives = 49/84 (58%)
Query: 8 ITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNR 67
+ + + F CP+SL+VM PV + +G TY++A I+RW+D G CP T Q L +PN
Sbjct: 231 VAILADFFCPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLKVCPKTRQTLTHTTLIPNY 290
Query: 68 TLQRLIQIWSDSVQHRVDSSESAT 91
T++ LI W ++ ++ +T
Sbjct: 291 TVKALIANWCETNDVKLPDPNKST 314
>TAIR|locus:2050659 [details] [associations]
symbol:AT2G45920 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AC004665
HSSP:Q8VZ40 HOGENOM:HOG000115794 ProtClustDB:CLSN2680474
EMBL:AK175182 EMBL:BT015764 EMBL:BT020181 IPI:IPI00546399
PIR:T02455 RefSeq:NP_182116.2 UniGene:At.22480
ProteinModelPortal:Q683D5 SMR:Q683D5 IntAct:Q683D5
EnsemblPlants:AT2G45920.1 GeneID:819200 KEGG:ath:AT2G45920
TAIR:At2g45920 eggNOG:NOG265582 InParanoid:Q683D5 OMA:ENRITES
PhylomeDB:Q683D5 Genevestigator:Q683D5 Uniprot:Q683D5
Length = 400
Score = 155 (59.6 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 31/74 (41%), Positives = 39/74 (52%)
Query: 3 RDDLYITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKE 62
R D + P +F CPISL+VMK P G TY+ +I WL G+ T P T L +
Sbjct: 318 RSDEHREAPQYFICPISLEVMKDPQLAADGFTYEAEAISTWLQGGHETSPMTNTKLHHTK 377
Query: 63 FVPNRTLQRLIQIW 76
VPN L+ IQ W
Sbjct: 378 LVPNLALRSAIQEW 391
>ZFIN|ZDB-GENE-061110-97 [details] [associations]
symbol:zgc:154085 "zgc:154085" species:7955 "Danio
rerio" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 ZFIN:ZDB-GENE-061110-97 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 EMBL:CABZ01026183 EMBL:CABZ01026184 EMBL:CABZ01048063
EMBL:CABZ01048064 EMBL:FP236277 IPI:IPI00993801
Ensembl:ENSDART00000128024 ArrayExpress:E7F9P4 Bgee:E7F9P4
Uniprot:E7F9P4
Length = 487
Score = 152 (58.6 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 30/74 (40%), Positives = 42/74 (56%)
Query: 6 LYITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVP 65
+Y P F CPI+ ++MK PV G +Y+R +I+ W+ + N T P T LQ+ P
Sbjct: 413 VYNGTPDEFLCPITREIMKDPVIAADGYSYEREAIEAWISTKNRTSPMTNLPLQTTLLTP 472
Query: 66 NRTLQRLIQIWSDS 79
NRTL+ I WS S
Sbjct: 473 NRTLKMAIFRWSTS 486
>TAIR|locus:2198165 [details] [associations]
symbol:AT1G01660 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 eggNOG:KOG0167
HOGENOM:HOG000115794 IPI:IPI00527810 PIR:E86147 RefSeq:NP_171672.1
UniGene:At.51449 ProteinModelPortal:P0C6E7 SMR:P0C6E7 PRIDE:P0C6E7
EnsemblPlants:AT1G01660.1 GeneID:839461 KEGG:ath:AT1G01660
TAIR:At1g01660 InParanoid:P0C6E7 PhylomeDB:P0C6E7
ProtClustDB:CLSN2912787 Genevestigator:P0C6E7 Uniprot:P0C6E7
Length = 568
Score = 153 (58.9 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 29/66 (43%), Positives = 38/66 (57%)
Query: 11 PSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNRTLQ 70
PS+F CPIS +VM+ P G TY+ S++ WLD+G+ T P T L VPN L+
Sbjct: 498 PSYFICPISQEVMREPRVAADGFTYEAESLREWLDNGHETSPMTNLKLAHNNLVPNHALR 557
Query: 71 RLIQIW 76
IQ W
Sbjct: 558 SAIQEW 563
>TAIR|locus:2198190 [details] [associations]
symbol:PUB54 "plant U-box 54" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR006016
Pfam:PF00582 Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0006950
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40
IPI:IPI00532514 PIR:F86147 RefSeq:NP_171674.2 UniGene:At.42636
ProteinModelPortal:Q9LQ92 SMR:Q9LQ92 EnsemblPlants:AT1G01680.1
GeneID:839251 KEGG:ath:AT1G01680 TAIR:At1g01680 eggNOG:NOG331289
HOGENOM:HOG000115795 InParanoid:Q9LQ92 OMA:RDICINK PhylomeDB:Q9LQ92
ProtClustDB:CLSN2917980 Genevestigator:Q9LQ92 Uniprot:Q9LQ92
Length = 308
Score = 146 (56.5 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 14 FRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNRTLQRLI 73
F+CPIS+++M+ P G TY+ ++WL SG T P T + L++ VPN TL+ +I
Sbjct: 237 FKCPISMEIMRDPHVAADGFTYEAEEFRKWLRSGGRTSPKTNKPLENHNLVPNHTLRIII 296
Query: 74 QIW 76
+ W
Sbjct: 297 KDW 299
>TAIR|locus:2115365 [details] [associations]
symbol:AT4G36550 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0001666 "response to hypoxia" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010310 "regulation of
hydrogen peroxide metabolic process" evidence=RCA] [GO:0031347
"regulation of defense response" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002687 GenomeReviews:CT486007_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AL161589
GO:GO:0000151 EMBL:Z99708 HSSP:Q8VZ40 IPI:IPI00536151 PIR:E85431
RefSeq:NP_195373.6 UniGene:At.31319 ProteinModelPortal:O23225
SMR:O23225 GeneID:829807 KEGG:ath:AT4G36550 TAIR:At4g36550
eggNOG:NOG316001 HOGENOM:HOG000241850 InParanoid:O23225 OMA:CERIRDS
ArrayExpress:O23225 Genevestigator:O23225 Uniprot:O23225
Length = 718
Score = 141 (54.7 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 26/68 (38%), Positives = 39/68 (57%)
Query: 9 TVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNRT 68
T+P F+C +S VM PV + +G T++R IQ+W D GN++CP + + L PN
Sbjct: 218 TLPEKFKCTLSRTVMYDPVIISSGNTFERMQIQKWFDEGNDSCPISKRKLDDFTLKPNVE 277
Query: 69 LQRLIQIW 76
L+ I W
Sbjct: 278 LKSQISEW 285
Score = 54 (24.1 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 16/75 (21%), Positives = 39/75 (52%)
Query: 311 LITEKALRLVEILSTTKQGRMEICQDAALLNGVVQKMLKTAQEAVSSSNVLTKILLLMQS 370
++ E+AL ++E+LS G +I +L + + K++++ E + ++T L + S
Sbjct: 477 VVAEEALNILEVLSNHPHGPSKITSSGSLSS--LLKIVESQAEHLQEQAMIT--LKNLSS 532
Query: 371 NCTPAVRQMSADLLK 385
+ + +S D ++
Sbjct: 533 SMEICLEMVSLDFIQ 547
>TAIR|locus:2146183 [details] [associations]
symbol:AT5G18320 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
IPI:IPI00534776 RefSeq:NP_197333.2 UniGene:At.54897
ProteinModelPortal:Q3E9F7 SMR:Q3E9F7 PaxDb:Q3E9F7 PRIDE:Q3E9F7
EnsemblPlants:AT5G18320.1 GeneID:831950 KEGG:ath:AT5G18320
TAIR:At5g18320 eggNOG:NOG312656 InParanoid:Q3E9F7 OMA:NTIMIEP
PhylomeDB:Q3E9F7 ProtClustDB:CLSN2686550 Genevestigator:Q3E9F7
Uniprot:Q3E9F7
Length = 458
Score = 143 (55.4 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 72/294 (24%), Positives = 137/294 (46%)
Query: 8 ITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNR 67
+ VP F C +S +M PV + +G TY++ I WL TCP T QVL + ++PN
Sbjct: 70 VEVPKEFICTLSNTIMIEPVIIASGQTYEKRYITEWLKH-ERTCPKTKQVLSHRLWIPNH 128
Query: 68 TLQRLIQIWSDSVQHRVDSSESATGRPVVLSQDEVKDIIRVAISKNEDFSENLTKIVAFA 127
+ LI W + ++ D + + L +++ +++ +S + ++ + A
Sbjct: 129 LISDLITQWC--LVNKYDHQKPSDELVAELFTSDIEALLQ-RVSSSSSVADQIEA----A 181
Query: 128 KESDENKTFLAKFDGLVVMLVEILSNVND-VNMLKQVIRVLD-LILNKIEDQQH----LM 181
KE ++T KF + V V + ++D + L + LD + + +E Q++ L
Sbjct: 182 KEL-RHQT--KKFPNVRVFFV---AGIHDSITRLLSPLSTLDEAVDSSLELQENIVTALF 235
Query: 182 NL-ILKRD-----QDCLNSLLLVLKQQESVD-SRIESLRLLEFIAGDADSKVKIAERDGL 234
NL IL+ + ++CL LL ++ D +R + L ++ +K+ I
Sbjct: 236 NLSILESNKTVIAENCLVIPLLTKSLKQGTDETRRNAAATLSSLSAIDSNKIIIGN---- 291
Query: 235 LAETVKSLSLDSDRRLIEASLSCLITISSSKRAKTKLINHKLITE-LGKLITDG 287
+E VK+L +D LIE + ++K A + + N ++ E GK+++ G
Sbjct: 292 -SEAVKAL-ID----LIEEG-----DLLATKEATSTVFNLCIVLENKGKVVSAG 334
>TAIR|locus:2030462 [details] [associations]
symbol:SAUL1 "senescence-associated E3 ubiquitin ligase
1" species:3702 "Arabidopsis thaliana" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0070696 "transmembrane receptor
protein serine/threonine kinase binding" evidence=IPI] [GO:0005515
"protein binding" evidence=IPI] [GO:0010115 "regulation of abscisic
acid biosynthetic process" evidence=IMP] [GO:0010150 "leaf
senescence" evidence=IMP] [GO:0010271 "regulation of chlorophyll
catabolic process" evidence=IMP] [GO:0010380 "regulation of
chlorophyll biosynthetic process" evidence=IMP] [GO:0090359
"negative regulation of abscisic acid biosynthetic process"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 PROSITE:PS50176 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC069251 GO:GO:0010150
GO:GO:0010380 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010271
GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40 eggNOG:NOG276937
HOGENOM:HOG000241783 ProtClustDB:CLSN2682757 EMBL:AY059775
EMBL:AY096753 IPI:IPI00539405 IPI:IPI00886504 RefSeq:NP_564125.2
UniGene:At.21947 ProteinModelPortal:Q9LM76 SMR:Q9LM76 IntAct:Q9LM76
STRING:Q9LM76 PaxDb:Q9LM76 PRIDE:Q9LM76 EnsemblPlants:AT1G20780.1
GeneID:838668 KEGG:ath:AT1G20780 TAIR:At1g20780 InParanoid:Q9LM76
OMA:VARDYNL PhylomeDB:Q9LM76 Genevestigator:Q9LM76 GO:GO:0090359
Uniprot:Q9LM76
Length = 801
Score = 112 (44.5 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 25/68 (36%), Positives = 39/68 (57%)
Query: 14 FRCPISLDVMKSPVSLCTGVTYDRASIQRWL----DSGNN-TCPATMQVLQSKEFVPNRT 68
F CP++ +VM PV+L G T++R +I++W DSG +CP T Q L S + +
Sbjct: 27 FICPLTKEVMHDPVTLENGRTFEREAIEKWFKECRDSGRPPSCPLTSQELTSTDVSASIA 86
Query: 69 LQRLIQIW 76
L+ I+ W
Sbjct: 87 LRNTIEEW 94
Score = 77 (32.2 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 54/238 (22%), Positives = 98/238 (41%)
Query: 57 VLQSKEFVPNRTLQRLIQIWSDSVQHRVDSSESATGRPVVLSQDEVK------DIIRVAI 110
+ ++ V N L +I S HRV T + VV DE K D +R +
Sbjct: 133 IRSNRHGVRNSQLIHMIIDMLKSTSHRVRYKALQTLQVVVEGDDESKAIVAEGDTVRTLV 192
Query: 111 S-KNEDFSENLTKIVAFAKESDENKTFLAKFD---GLVVMLVEILSNVNDVNMLKQVIRV 166
+ + S+ V+ E +++ K G +++LV + S+ N N+ ++
Sbjct: 193 KFLSHEPSKGREAAVSLLFELSKSEALCEKIGSIHGALILLVGLTSS-NSENV--SIVEK 249
Query: 167 LDLILNKIEDQQHLMNLILK--RDQDCLNSLLLVLKQQESVDSRIESLRLLEFIAGDADS 224
D L +E + ++ + R Q L LL + S ++++ L + + D
Sbjct: 250 ADRTLENMERSEEIVRQMASYGRLQPLLGKLL-----EGSPETKLSMASFLGELPLNNDV 304
Query: 225 KVKIAERDGLLAETVKSLSLDSDRRLIEASLSCLITISSSKRAKTKLINHKLITELGK 282
KV +A+ G ++ L D EA+L L ISS + + LI+ ++ L K
Sbjct: 305 KVLVAQTVG---SSLVDLMRSGDMPQREAALKALNKISSFEGSAKVLISKGILPPLIK 359
>UNIPROTKB|E2QX39 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:1.10.150.50 InterPro:IPR013761 InterPro:IPR021129
Pfam:PF00536 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 CTD:151525 OMA:HCCCFSP
EMBL:AAEX03017692 RefSeq:XP_535926.3 Ensembl:ENSCAFT00000039730
GeneID:478761 KEGG:cfa:478761 NextBio:20854042 Uniprot:E2QX39
Length = 476
Score = 139 (54.0 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 25/72 (34%), Positives = 40/72 (55%)
Query: 10 VPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNRTL 69
+P F CPI+ ++MK PV G +Y++ +++ W+ T P T +L S PNRTL
Sbjct: 404 IPDEFLCPITRELMKDPVIASDGYSYEKEAMENWISKKKRTSPMTNLILPSMVLTPNRTL 463
Query: 70 QRLIQIWSDSVQ 81
+ I W ++ Q
Sbjct: 464 KMAISRWLETHQ 475
>UNIPROTKB|Q8N9V3 [details] [associations]
symbol:WDSUB1 "WD repeat, SAM and U-box domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR011510
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 Pfam:PF07647
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
EMBL:AC009307 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ EMBL:AK093494 EMBL:AC008277 EMBL:BC029520
IPI:IPI00167822 IPI:IPI00477952 RefSeq:NP_001121684.1
RefSeq:NP_689741.2 UniGene:Hs.20848 ProteinModelPortal:Q8N9V3
SMR:Q8N9V3 PhosphoSite:Q8N9V3 DMDM:229463016 PaxDb:Q8N9V3
PRIDE:Q8N9V3 Ensembl:ENST00000358147 Ensembl:ENST00000359774
Ensembl:ENST00000392796 Ensembl:ENST00000409990 GeneID:151525
KEGG:hsa:151525 UCSC:uc010foo.3 CTD:151525 GeneCards:GC02M160092
HGNC:HGNC:26697 HPA:HPA036840 neXtProt:NX_Q8N9V3
PharmGKB:PA128394761 InParanoid:Q8N9V3 OMA:HCCCFSP PhylomeDB:Q8N9V3
GenomeRNAi:151525 NextBio:86717 ArrayExpress:Q8N9V3 Bgee:Q8N9V3
CleanEx:HS_WDSUB1 Genevestigator:Q8N9V3 Uniprot:Q8N9V3
Length = 476
Score = 139 (54.0 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 26/72 (36%), Positives = 40/72 (55%)
Query: 10 VPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNRTL 69
+P F CPI+ ++MK PV G +Y++ +++ W+ T P T VL S PNRTL
Sbjct: 404 IPDEFICPITRELMKDPVIASDGYSYEKEAMENWISKKKRTSPMTNLVLPSAVLTPNRTL 463
Query: 70 QRLIQIWSDSVQ 81
+ I W ++ Q
Sbjct: 464 KMAINRWLETHQ 475
>TAIR|locus:2176177 [details] [associations]
symbol:AT5G51270 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 Pfam:PF04564
PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AB023044
HSSP:Q9WUD1 HOGENOM:HOG000237993 IPI:IPI00525770 RefSeq:NP_199940.1
UniGene:At.55484 ProteinModelPortal:Q9LU47 SMR:Q9LU47 PRIDE:Q9LU47
EnsemblPlants:AT5G51270.1 GeneID:835201 KEGG:ath:AT5G51270
GeneFarm:2016 TAIR:At5g51270 InParanoid:Q9LU47 OMA:ATHEAKE
PhylomeDB:Q9LU47 ProtClustDB:CLSN2916710 Genevestigator:Q9LU47
Uniprot:Q9LU47
Length = 819
Score = 142 (55.0 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 29/71 (40%), Positives = 39/71 (54%)
Query: 11 PSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNRTLQ 70
PS F CP+ DVMK P G TYDR +I+ W+++ + T P T LQ+ +PN TL
Sbjct: 750 PSHFFCPLLKDVMKEPCIAADGYTYDRRAIEEWMEN-HRTSPVTNSPLQNVNLLPNHTLY 808
Query: 71 RLIQIWSDSVQ 81
I W + Q
Sbjct: 809 AAIVEWRNRNQ 819
>UNIPROTKB|Q5ZMC3 [details] [associations]
symbol:WDSUB1 "WD repeat, SAM and U-box domain-containing
protein 1" species:9031 "Gallus gallus" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50105
PROSITE:PS50294 SMART:SM00320 SMART:SM00454 SMART:SM00504
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 InterPro:IPR021129 Pfam:PF00536 SUPFAM:SSF47769
GO:GO:0004842 GeneTree:ENSGT00700000104017 GO:GO:0000151
HSSP:P16649 EMBL:AJ719461 IPI:IPI00588518 UniGene:Gga.5996
ProteinModelPortal:Q5ZMC3 Ensembl:ENSGALT00000020533
HOGENOM:HOG000231980 HOVERGEN:HBG080511 InParanoid:Q5ZMC3
OrthoDB:EOG4NCMCJ Uniprot:Q5ZMC3
Length = 476
Score = 138 (53.6 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 25/74 (33%), Positives = 41/74 (55%)
Query: 8 ITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNR 67
+ VP F CPI+ ++MK PV G +Y++ +++ W+ + + P T L S PNR
Sbjct: 402 VAVPDEFLCPITRELMKDPVIAADGYSYEKEAMENWISNNRRSSPMTNLPLPSLVLTPNR 461
Query: 68 TLQRLIQIWSDSVQ 81
TL+ I W ++ Q
Sbjct: 462 TLKMAISRWLETQQ 475
>MGI|MGI:1919387 [details] [associations]
symbol:Wdsub1 "WD repeat, SAM and U-box domain containing 1"
species:10090 "Mus musculus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR011510
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 Pfam:PF07647
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 MGI:MGI:1919387 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:AK011391
EMBL:AL929242 EMBL:BC050792 EMBL:BC061948 IPI:IPI00132574
RefSeq:NP_001153108.1 RefSeq:NP_082394.1 UniGene:Mm.288734
UniGene:Mm.488684 ProteinModelPortal:Q9D0I6 SMR:Q9D0I6
PhosphoSite:Q9D0I6 PRIDE:Q9D0I6 Ensembl:ENSMUST00000028368
GeneID:72137 KEGG:mmu:72137 UCSC:uc008jto.2 InParanoid:Q9D0I6
NextBio:335536 Bgee:Q9D0I6 CleanEx:MM_WDSUB1 Genevestigator:Q9D0I6
Uniprot:Q9D0I6
Length = 474
Score = 137 (53.3 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 27/76 (35%), Positives = 40/76 (52%)
Query: 4 DDLYITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEF 63
D L +P F CPI+ ++MK PV G +Y+R +++ W+ T P T L S
Sbjct: 396 DSLSSGIPDEFICPITRELMKDPVIASDGYSYEREAMESWIHKKKRTSPMTNLALPSLVL 455
Query: 64 VPNRTLQRLIQIWSDS 79
PNRTL+ I W ++
Sbjct: 456 TPNRTLKMAINRWLET 471
>TAIR|locus:2117343 [details] [associations]
symbol:AT4G25160 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0002238 "response
to molecule of fungal origin" evidence=RCA] InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00582 Pfam:PF04564 Pfam:PF07714 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006950
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AL161562 GO:GO:0004842 EMBL:AL035523
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AL035396
HSSP:Q8VZ40 HOGENOM:HOG000237993 EMBL:BX828107 IPI:IPI00540343
PIR:T05537 RefSeq:NP_194246.2 UniGene:At.32287
ProteinModelPortal:Q9SW11 SMR:Q9SW11 IntAct:Q9SW11 PaxDb:Q9SW11
PRIDE:Q9SW11 EnsemblPlants:AT4G25160.1 GeneID:828619
KEGG:ath:AT4G25160 GeneFarm:2015 TAIR:At4g25160 InParanoid:Q9SW11
OMA:FQQELEI PhylomeDB:Q9SW11 ProtClustDB:CLSN2918598
Genevestigator:Q9SW11 Uniprot:Q9SW11
Length = 835
Score = 139 (54.0 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 29/66 (43%), Positives = 35/66 (53%)
Query: 11 PSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNRTLQ 70
P+ F CP+ DVM P G TYDR +I+ WL +NT P T L SK +PN TL
Sbjct: 767 PTHFICPLLKDVMNEPCVAADGYTYDRHAIEEWLKE-HNTSPMTDSPLHSKNLLPNYTLY 825
Query: 71 RLIQIW 76
I W
Sbjct: 826 TAIMEW 831
>RGD|1359296 [details] [associations]
symbol:Wdsub1 "WD repeat, sterile alpha motif and U-box domain
containing 1" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 RGD:1359296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:BC089856
IPI:IPI00391796 RefSeq:NP_001014201.1 UniGene:Rn.101918
ProteinModelPortal:Q5FVN8 PRIDE:Q5FVN8 Ensembl:ENSRNOT00000008168
GeneID:362137 KEGG:rno:362137 UCSC:RGD:1359296 InParanoid:Q5FVN8
NextBio:678784 ArrayExpress:Q5FVN8 Genevestigator:Q5FVN8
Uniprot:Q5FVN8
Length = 476
Score = 135 (52.6 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 26/72 (36%), Positives = 39/72 (54%)
Query: 10 VPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNRTL 69
+P F CPI+ ++MK PV G +Y+R +++ W+ T P T L S PNRTL
Sbjct: 404 IPDEFICPITRELMKDPVIASDGYSYEREAMESWIHKKKRTSPMTNLALPSLVLTPNRTL 463
Query: 70 QRLIQIWSDSVQ 81
+ I W ++ Q
Sbjct: 464 KMAINRWLETHQ 475
>TAIR|locus:2101353 [details] [associations]
symbol:AT3G49060 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004713 "protein
tyrosine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005886 "plasma membrane" evidence=ISM;IDA] [GO:0006468
"protein phosphorylation" evidence=IEA] [GO:0016301 "kinase
activity" evidence=ISS] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR003613 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF04564 Pfam:PF07714 PROSITE:PS00107
PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143 GO:GO:0005886
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL132967
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004672 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40 EMBL:AY050369
EMBL:BT004526 EMBL:AK176246 EMBL:AK176327 EMBL:AK176453
EMBL:AK176423 IPI:IPI00530482 IPI:IPI00886501 PIR:T46124
RefSeq:NP_566915.1 UniGene:At.22745 ProteinModelPortal:Q94A51
SMR:Q94A51 PRIDE:Q94A51 EnsemblPlants:AT3G49060.1 GeneID:824068
KEGG:ath:AT3G49060 GeneFarm:1985 TAIR:At3g49060
HOGENOM:HOG000237993 InParanoid:Q94A51 OMA:MEINEAT PhylomeDB:Q94A51
ProtClustDB:CLSN2917392 Genevestigator:Q94A51 Uniprot:Q94A51
Length = 805
Score = 137 (53.3 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 25/68 (36%), Positives = 38/68 (55%)
Query: 11 PSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNRTLQ 70
PS + CPI +VMK P+ G TY+ +I+ WL +G++T P T ++ +PN L
Sbjct: 736 PSHYLCPIFQEVMKDPLIAADGFTYEAEAIREWLANGHDTSPMTNLKMEDCNLIPNHALH 795
Query: 71 RLIQIWSD 78
IQ W +
Sbjct: 796 LAIQDWQN 803
>UNIPROTKB|F1MRF3 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 CTD:151525
EMBL:DAAA02004471 IPI:IPI00702869 RefSeq:XP_002685394.1
UniGene:Bt.105170 ProteinModelPortal:F1MRF3
Ensembl:ENSBTAT00000005476 GeneID:783784 KEGG:bta:783784
NextBio:20926301 Uniprot:F1MRF3
Length = 476
Score = 133 (51.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 24/67 (35%), Positives = 37/67 (55%)
Query: 10 VPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNRTL 69
+P F CPI+ ++MK P+ G +Y++ +++ W+ T P T VL S PNRTL
Sbjct: 403 IPDEFICPITRELMKDPIIASDGYSYEKEAMENWISRKKRTSPMTNLVLSSVILTPNRTL 462
Query: 70 QRLIQIW 76
+ I W
Sbjct: 463 KMAIDRW 469
>UNIPROTKB|G3MZA8 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 OMA:HCCCFSP
EMBL:DAAA02004471 ProteinModelPortal:G3MZA8
Ensembl:ENSBTAT00000064632 Uniprot:G3MZA8
Length = 477
Score = 133 (51.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 24/67 (35%), Positives = 37/67 (55%)
Query: 10 VPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNRTL 69
+P F CPI+ ++MK P+ G +Y++ +++ W+ T P T VL S PNRTL
Sbjct: 404 IPDEFICPITRELMKDPIIASDGYSYEKEAMENWISRKKRTSPMTNLVLSSVILTPNRTL 463
Query: 70 QRLIQIW 76
+ I W
Sbjct: 464 KMAIDRW 470
>TAIR|locus:2198180 [details] [associations]
symbol:AT1G01670 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40
eggNOG:KOG0167 PIR:E86147 EMBL:AK118101 IPI:IPI00528098
RefSeq:NP_171673.2 UniGene:At.42637 ProteinModelPortal:Q8GXQ7
SMR:Q8GXQ7 EnsemblPlants:AT1G01670.1 GeneID:839365
KEGG:ath:AT1G01670 TAIR:At1g01670 InParanoid:Q8GXQ7 OMA:NDNEMEL
PhylomeDB:Q8GXQ7 Genevestigator:Q8GXQ7 Uniprot:Q8GXQ7
Length = 365
Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 25/69 (36%), Positives = 37/69 (53%)
Query: 8 ITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNR 67
I P F CPIS D+M++P G TY+ +RWL+ G P T L+++ +PN
Sbjct: 292 IEPPQCFICPISKDIMQNPHVAADGYTYEADEFRRWLNHGGEKSPMTNLRLENRNLIPNL 351
Query: 68 TLQRLIQIW 76
L+ I+ W
Sbjct: 352 VLRSAIKDW 360
>TAIR|locus:2098816 [details] [associations]
symbol:AT3G61390 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002686 GenomeReviews:BA000014_GR
EMBL:AL132962 EMBL:AL137898 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151
HSSP:Q8VZ40 EMBL:AK117154 EMBL:BT005367 IPI:IPI00525308 PIR:T47931
RefSeq:NP_191698.2 UniGene:At.34291 ProteinModelPortal:Q8GZ84
SMR:Q8GZ84 EnsemblPlants:AT3G61390.2 GeneID:825311
KEGG:ath:AT3G61390 TAIR:At3g61390 eggNOG:NOG327619
HOGENOM:HOG000115794 InParanoid:Q8GZ84 OMA:QITESYT PhylomeDB:Q8GZ84
ProtClustDB:CLSN2680474 Genevestigator:Q8GZ84 Uniprot:Q8GZ84
Length = 435
Score = 132 (51.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 25/66 (37%), Positives = 35/66 (53%)
Query: 11 PSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNRTLQ 70
P +F CPI+ D+M+ P G TY+ +I RW + G+ T P + L VPN L+
Sbjct: 354 PQYFICPITHDIMEDPHVAADGFTYEGEAISRWFERGHETSPMINKRLPHTSLVPNLALR 413
Query: 71 RLIQIW 76
IQ W
Sbjct: 414 SAIQEW 419
>UNIPROTKB|Q0DR28 [details] [associations]
symbol:PUB57 "U-box domain-containing protein 57"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000719
InterPro:IPR003613 InterPro:IPR008266 InterPro:IPR011009
Pfam:PF00069 Pfam:PF04564 PROSITE:PS00109 PROSITE:PS50011
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005524 eggNOG:COG0515
SUPFAM:SSF56112 EMBL:DP000009 EMBL:AP008209 GO:GO:0004713
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AC114983 EMBL:AK069682 RefSeq:NP_001050396.1 UniGene:Os.52876
EnsemblPlants:LOC_Os03g31070.1 GeneID:4333147
KEGG:dosa:Os03t0424200-01 KEGG:osa:4333147 Gramene:Q0DR28
OMA:IDINATF Uniprot:Q0DR28
Length = 518
Score = 132 (51.5 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 26/65 (40%), Positives = 37/65 (56%)
Query: 9 TVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNRT 68
+VP+ F CPIS+++MK P G TY+ +I+ W D G + P T L + VPNR
Sbjct: 434 SVPAAFICPISMEIMKDPQVASDGFTYEAEAIRCWFDRGISRSPMTNLALPNLNLVPNRV 493
Query: 69 LQRLI 73
L+ I
Sbjct: 494 LRSFI 498
>TAIR|locus:2146213 [details] [associations]
symbol:AT5G18340 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
ProtClustDB:CLSN2686550 IPI:IPI00517179 RefSeq:NP_197335.1
UniGene:At.54899 ProteinModelPortal:Q3E9F5 SMR:Q3E9F5
EnsemblPlants:AT5G18340.1 GeneID:831952 KEGG:ath:AT5G18340
TAIR:At5g18340 eggNOG:NOG267360 InParanoid:Q3E9F5 OMA:ISPHERV
PhylomeDB:Q3E9F5 Genevestigator:Q3E9F5 Uniprot:Q3E9F5
Length = 456
Score = 129 (50.5 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 62/275 (22%), Positives = 108/275 (39%)
Query: 4 DDLYITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEF 63
D + VP F+C +S +M PV + +G TY++ I WL+ + TCP QVL
Sbjct: 68 DSSSVEVPKEFKCTLSKTIMIDPVIIFSGQTYEKRYITEWLNH-DLTCPTAKQVLYRVCL 126
Query: 64 VPNRTLQRLIQIWSDSVQH-RVDSSESATGRPVVLSQDEVKDIIRVAISKNEDFSENL-- 120
PN + LI W + ++ R S L D ++ +++ S + ++
Sbjct: 127 TPNHLINELITRWCLANKYDRPAPKPSDIDYVTELFTDGIESLLQRISSPSSSVADQTEA 186
Query: 121 TKIVAFAKESDEN-KTFLAKF--DGLVVML--VEILSNVNDVNMLKQVIRVLDLILNKIE 175
K +A E N + F K D + +L + +L + D N Q ++ + N
Sbjct: 187 AKELALQTEKFVNVRDFFIKELPDSITRLLTPLSVLGDEVDSNPELQE-NIVTALFNMST 245
Query: 176 DQQHLMNLILKRDQDCLNSLLLVLKQQESVDSRIESLRLLEFIAGDADSKVKIAERDGLL 235
+++ +L + + L +KQ V R +L L D DS I L
Sbjct: 246 FEKN--KTVLAENHQVIPLLAKSMKQGSVVTRRNATLTLASL--SDIDSNKIIIGNSVAL 301
Query: 236 AETVKSLSLDSDRRLIEASLSCLITISSSKRAKTK 270
+ + D +L +I + +R K
Sbjct: 302 KALIDLIGELDDLSATHDALCAVIDLCCDERENWK 336
>TAIR|locus:2047605 [details] [associations]
symbol:AT2G19410 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 Pfam:PF04564
PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005524 EMBL:CP002685
GenomeReviews:CT485783_GR eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 HSSP:P36897 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC003058 HOGENOM:HOG000237993
IPI:IPI00517039 PIR:T01289 RefSeq:NP_179531.1 UniGene:At.52830
ProteinModelPortal:Q8S8S7 SMR:Q8S8S7 PRIDE:Q8S8S7
EnsemblPlants:AT2G19410.1 GeneID:816460 KEGG:ath:AT2G19410
GeneFarm:2021 TAIR:At2g19410 InParanoid:Q8S8S7 OMA:VETANSK
PhylomeDB:Q8S8S7 ProtClustDB:CLSN2683172 Genevestigator:Q8S8S7
Uniprot:Q8S8S7
Length = 801
Score = 130 (50.8 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 26/74 (35%), Positives = 39/74 (52%)
Query: 8 ITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNR 67
+ PS + CPI ++M+ P G TY+R +I WL+ +N P T Q L + PN
Sbjct: 723 LRAPSHYFCPILREIMEEPEIAADGFTYERKAILAWLEK-HNISPVTRQKLDHFKLTPNH 781
Query: 68 TLQRLIQIWSDSVQ 81
TL+ I+ W V+
Sbjct: 782 TLRSAIRDWKSRVR 795
>TAIR|locus:2050669 [details] [associations]
symbol:AT2G45910 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 Pfam:PF00582 Pfam:PF04564 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006950
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.60.120.200
InterPro:IPR013320 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151
EMBL:AC004665 HSSP:Q8VZ40 HOGENOM:HOG000237993 EMBL:BT002512
EMBL:AK227123 IPI:IPI00542046 PIR:T02456 RefSeq:NP_182115.2
UniGene:At.36571 ProteinModelPortal:Q8GUH1 SMR:Q8GUH1 PRIDE:Q8GUH1
EnsemblPlants:AT2G45910.1 GeneID:819199 KEGG:ath:AT2G45910
GeneFarm:1984 TAIR:At2g45910 InParanoid:Q8GUH1 OMA:KGTFAYM
PhylomeDB:Q8GUH1 ProtClustDB:CLSN2680270 Genevestigator:Q8GUH1
Uniprot:Q8GUH1
Length = 834
Score = 128 (50.1 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 27/74 (36%), Positives = 39/74 (52%)
Query: 11 PSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNRTLQ 70
P +F CPI +VM+ P G TY+ +I+ WLDS ++T P T L + N L+
Sbjct: 764 PPYFICPIFQEVMQDPHVAADGFTYEAEAIRAWLDSEHDTSPMTNVKLSHTSLIANHALR 823
Query: 71 RLIQIWSDSVQHRV 84
IQ W +QH +
Sbjct: 824 SAIQEW---LQHHL 834
>TAIR|locus:504954932 [details] [associations]
symbol:AT5G57035 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 Pfam:PF00582 Pfam:PF04564 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 GO:GO:0005524
EMBL:CP002688 GO:GO:0006950 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 IPI:IPI00538382
RefSeq:NP_680448.2 UniGene:At.23555 UniGene:At.45477
ProteinModelPortal:F4K964 SMR:F4K964 EnsemblPlants:AT5G57035.1
GeneID:835807 KEGG:ath:AT5G57035 OMA:EYQRTGT PhylomeDB:F4K964
Uniprot:F4K964
Length = 789
Score = 126 (49.4 bits), Expect = 0.00013, P = 0.00013
Identities = 24/77 (31%), Positives = 40/77 (51%)
Query: 11 PSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNRTLQ 70
P+ + CPI ++M+ P G TY+R +I+ W+ + P T L+ + PN TL+
Sbjct: 709 PTHYYCPILKEIMEDPQIAADGFTYERKAIKEWIQKHQDVSPVTKHRLKHSDLTPNHTLR 768
Query: 71 RLIQIWSDSVQHRVDSS 87
I+ W + R+D S
Sbjct: 769 SAIREWRS--RSRLDLS 783
>TAIR|locus:2151641 [details] [associations]
symbol:AT5G61560 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004713
"protein tyrosine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0002237 "response to molecule of
bacterial origin" evidence=RCA] [GO:0002238 "response to molecule
of fungal origin" evidence=RCA] [GO:0002679 "respiratory burst
involved in defense response" evidence=RCA] [GO:0006499 "N-terminal
protein myristoylation" evidence=RCA] [GO:0006865 "amino acid
transport" evidence=RCA] [GO:0009581 "detection of external
stimulus" evidence=RCA] [GO:0009595 "detection of biotic stimulus"
evidence=RCA] [GO:0010200 "response to chitin" evidence=RCA]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=RCA] InterPro:IPR000719 InterPro:IPR001245
InterPro:IPR003613 InterPro:IPR006016 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00582 Pfam:PF04564
Pfam:PF07714 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005886 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0006950
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0000151 EMBL:AB012239 HSSP:Q8VZ40
HOGENOM:HOG000237993 EMBL:AK228747 IPI:IPI00543972 IPI:IPI00886514
RefSeq:NP_200964.2 UniGene:At.29098 ProteinModelPortal:Q9FKG5
SMR:Q9FKG5 STRING:Q9FKG5 PaxDb:Q9FKG5 PRIDE:Q9FKG5
EnsemblPlants:AT5G61560.1 GeneID:836277 KEGG:ath:AT5G61560
GeneFarm:2020 TAIR:At5g61560 InParanoid:Q9FKG5 OMA:CIERETE
PhylomeDB:Q9FKG5 ProtClustDB:CLSN2918426 Genevestigator:Q9FKG5
Uniprot:Q9FKG5
Length = 796
Score = 121 (47.7 bits), Expect = 0.00047, P = 0.00047
Identities = 25/72 (34%), Positives = 38/72 (52%)
Query: 5 DLYITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFV 64
D + P+ F CPI+ DVM++P G TY++ +I+ WL N+ P T S +
Sbjct: 720 DHHHNAPTHFYCPITKDVMENPCVASDGYTYEKRAIKEWLQK-NHKSPMTDLPFPSDSLL 778
Query: 65 PNRTLQRLIQIW 76
PN +L I+ W
Sbjct: 779 PNHSLLSAIKEW 790
>DICTYBASE|DDB_G0293212 [details] [associations]
symbol:DDB_G0293212 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003613 Pfam:PF04564
SMART:SM00382 SMART:SM00504 dictyBase:DDB_G0293212 GO:GO:0005524
EMBL:AAFI02000200 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0017111 GO:GO:0004842 GO:GO:0000151 eggNOG:COG0507
InterPro:IPR010285 Pfam:PF05970 RefSeq:XP_629245.1
ProteinModelPortal:Q54C21 EnsemblProtists:DDB0191825 GeneID:8629127
KEGG:ddi:DDB_G0293212 InParanoid:Q54C21 OMA:RNANQEN
ProtClustDB:CLSZ2429302 Uniprot:Q54C21
Length = 846
Score = 121 (47.7 bits), Expect = 0.00051, P = 0.00051
Identities = 25/72 (34%), Positives = 37/72 (51%)
Query: 9 TVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEF-VPNR 67
T+P +F CPIS +M+ P G T++R+SI W D T + + +PNR
Sbjct: 771 TIPIYFLCPISQKIMEHPYVAPDGYTFERSSILEWFDKRGAISFVTKRPFSTSAILIPNR 830
Query: 68 TLQRLIQIWSDS 79
L+ IQ W +S
Sbjct: 831 NLKAQIQEWKNS 842
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.132 0.360 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 408 388 0.00093 117 3 10 22 0.37 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 58
No. of states in DFA: 617 (66 KB)
Total size of DFA: 304 KB (2158 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 46.63u 0.12s 46.75t Elapsed: 00:00:03
Total cpu time: 46.64u 0.12s 46.76t Elapsed: 00:00:03
Start: Sat May 11 11:07:06 2013 End: Sat May 11 11:07:09 2013