BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036338
(408 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FLF4|PUB27_ARATH U-box domain-containing protein 27 OS=Arabidopsis thaliana GN=PUB27
PE=2 SV=1
Length = 420
Score = 386 bits (992), Expect = e-106, Method: Compositional matrix adjust.
Identities = 226/443 (51%), Positives = 303/443 (68%), Gaps = 58/443 (13%)
Query: 1 MVRDDLYITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQS 60
M +DDL ITVP+FFRCPISLDVMKSPVSLCTGVTYDRASIQRWLD GNNTCPATMQ+LQ+
Sbjct: 1 MRKDDLCITVPTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQN 60
Query: 61 KEFVPNRTLQRLIQIWSDSVQHR--VDSSESATGRPVVLSQDEVKDII-RVAISKNE-DF 116
K+F+PNRTLQRLI+IWSDSV+ R V+S+E A ++DE+ D I RV I K E D
Sbjct: 61 KDFIPNRTLQRLIEIWSDSVRRRTCVESAELAAP-----TRDEIADAIDRVKIEKEERDD 115
Query: 117 SENLTKIVAFAKESDENKTFLAKFDGLVVMLVEILSNVNDVN-------MLKQVIRVLDL 169
E L+KIV F +ESD+N+ FLA D V +LV++++ V+ ++++ +++L
Sbjct: 116 REVLSKIVRFGRESDDNRGFLAGKDDFVKLLVDLINQVDFETTSAAKSLVVQEAVKILST 175
Query: 170 ILNKIEDQQHLMNLILKRDQDCLNSLLLVLKQQESVDSRIESLRLLEFIAGDADSKVKIA 229
I +K+ D++ NLIL +D L S+++ L + +V+ +I+ LLEFIA DA+SK+ IA
Sbjct: 176 IRSKVSDRRRFSNLILTNGRDRL-SVIVYLFKTGNVELKIDCAGLLEFIAVDAESKLLIA 234
Query: 230 ERDGLLAETVKSLSLDSDRRLIEASLSCLITISSSKRAKTKLINHKLITELGKLITDGHN 289
ERDGL+ E +KS+S DSD LIE+SLSCLI ISS KR K L+ KLI ++ KL++
Sbjct: 235 ERDGLITELMKSISKDSDLSLIESSLSCLIAISSPKRVKLNLLREKLIGDVTKLLS---- 290
Query: 290 GNGSGNGNGNGNGNGSGNGTVLITEKALRLVEILSTTKQGRMEIC-QDAALLNGVVQKML 348
+ + + +V +TEK L+L+EIL++TK+GR EIC D L VV+K++
Sbjct: 291 -------------DSTSSLSVSVTEKCLKLLEILASTKEGRSEICGGDGECLKTVVKKLM 337
Query: 349 KT-----------------------AQEAVSSSNVLTKILLLMQSNCTPAVRQMSADLLK 385
K A EAV+S N +TKILLL+QSNC+PAVR+M DLLK
Sbjct: 338 KVSTAATEHAVTVLWSVSYLFKEDKALEAVTSVNGVTKILLLLQSNCSPAVRRMLTDLLK 397
Query: 386 IFRVNYKSCLASYDTKTTHIMPF 408
+F+VN +SCL++YDTKTTHIMPF
Sbjct: 398 VFKVNSRSCLSAYDTKTTHIMPF 420
>sp|Q9LSA6|PUB29_ARATH U-box domain-containing protein 29 OS=Arabidopsis thaliana GN=PUB29
PE=1 SV=1
Length = 415
Score = 348 bits (892), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 213/444 (47%), Positives = 291/444 (65%), Gaps = 65/444 (14%)
Query: 1 MVRDDL--YITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVL 58
M RD+ YITVPSFF+CPISLDVM+SPVSLCTGVTYDRASIQRWLD GNNTCPATMQ+L
Sbjct: 1 MGRDETETYITVPSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQLL 60
Query: 59 QSKEFVPNRTLQRLIQIWSDSV--QHRVDSS--ESATGRPVVLSQDEVKDIIRVAISKNE 114
++K+FVPN TLQRLI IWSDS+ +H DS +GR V +++EV ++ +S
Sbjct: 61 KTKDFVPNLTLQRLINIWSDSIGRRHNGDSPVLNPPSGREVP-TKEEVNVLLERLMS--- 116
Query: 115 DFSENLTKIVAFAKESDENKTFLAKFDGLVVMLVEIL-SNVNDVNMLKQVIRVLDLILNK 173
ENL KIV F K+SD N+ FL+K V MLV+I+ + + ++ IR+LD I K
Sbjct: 117 --LENLMKIVRFVKDSDSNREFLSKKMEFVPMLVDIIRTKKTKIELVIMAIRILDSI--K 172
Query: 174 IEDQQHLMNLILKRD-QDCLNSLLLVLKQQESVDSRIESLRLLEFIAGDADSKVKIAERD 232
+ D++ L NL+L D DCL ++LL + Q+ +++S+IES+R+L++I+ DA SK+ IAERD
Sbjct: 173 V-DRERLSNLMLANDGGDCLTAILLAI-QRGNLESKIESVRVLDWISFDAKSKLMIAERD 230
Query: 233 GLLAETVKSLSL--DSDRRLIEASLSCLITISSSKRAKTKLINHKLITELGKLITDGHNG 290
G+L E +KS+S+ SD LIEASLS LITIS SKR ++KLI K IT++ ++
Sbjct: 231 GVLTEMMKSISITESSDPSLIEASLSFLITISKSKRVRSKLIAAKAITKIKDILLTETLT 290
Query: 291 NGSGNGNGNGNGNGSGNGTVLITEKALRLVEILSTTKQGRMEICQD--AALLNGVVQKML 348
N V +TEK+L+L+E LS+ ++GR+EIC D + GVV+K+L
Sbjct: 291 N------------------VAVTEKSLKLLETLSSKREGRLEICGDDNGRCVEGVVKKLL 332
Query: 349 ------------------------KTAQEAVSSSNVLTKILLLMQSNCTPAVRQMSADLL 384
KT +E V SN +TK+L+++QSNC+ VRQM+ DL+
Sbjct: 333 KVSTTATEHAVTILWCLCYVFREDKTVEETVERSNGVTKLLVVIQSNCSAMVRQMAKDLI 392
Query: 385 KIFRVNYKSCLASYDTKTTHIMPF 408
K+ + N S LA+Y+TKTTHIMPF
Sbjct: 393 KVLKFN-SSALAAYETKTTHIMPF 415
>sp|Q9LXE3|PUB28_ARATH U-box domain-containing protein 28 OS=Arabidopsis thaliana GN=PUB28
PE=1 SV=1
Length = 409
Score = 348 bits (892), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 211/437 (48%), Positives = 273/437 (62%), Gaps = 57/437 (13%)
Query: 1 MVRDDLYIT-VPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQ 59
M DDLYIT VP FF+CPISLDVMKSPVSL TGVTYDR SIQRWLD GNNTCPATMQ+LQ
Sbjct: 1 MRSDDLYITTVPCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNNTCPATMQILQ 60
Query: 60 SKEFVPNRTLQRLIQIWSDSVQHRVDSSESATGRPVVLSQDEVKDIIRVAISKNEDFSEN 119
+KEFVPN TL RLI WSDS+ R DS + P +D I AI + ++
Sbjct: 61 NKEFVPNLTLHRLIDHWSDSINRRADSESPESDTP-------TRDEINAAIERFRIENDA 113
Query: 120 LTKIVAFAKESDENKTFLAKFDGLVVMLVEILS---NVNDVNML--KQVIRVLDLILNKI 174
+KI+ FA+ESDEN+ FLA D V MLV+++S N +D +L + +++L +I KI
Sbjct: 114 RSKILRFARESDENREFLAGKDDFVAMLVDLISDSRNFSDSQLLLVGEAVKILSMIRRKI 173
Query: 175 EDQQHLMNLILKRDQDCLNSLLLVLKQQESVDSRIESLRLLEFIAGDADSKVKIAERDGL 234
D++ L NLIL DCL S L++K+ +I+ +LEFIA DA+SK+ IA+ +GL
Sbjct: 174 FDRRRLSNLILTNGGDCLTSFFLLIKRGNP-KLKIDCSAVLEFIAVDAESKLIIAKGEGL 232
Query: 235 LAETVKSLSLDSDRRLIEASLSCLITISSSKRAKTKLINHKLITELGKLITDGHNGNGSG 294
+ E +K +S DSD LIEA+LS LI I+SSKR K LI KL+T+L L+TD
Sbjct: 233 VTEIIKLISSDSDSSLIEANLSLLIAIASSKRVKLALIREKLVTKLTSLLTD-------- 284
Query: 295 NGNGNGNGNGSGNGTVLITEKALRLVEILSTTKQGRMEICQDAALLNGVVQKMLKT---- 350
+V +TEK L+L+E +S+ K+GR EIC D + VV K++K
Sbjct: 285 -----------PTTSVSVTEKCLKLLEAISSCKEGRSEIC-DGVCVETVVNKLMKVSTAA 332
Query: 351 -------------------AQEAVSSSNVLTKILLLMQSNCTPAVRQMSADLLKIFRVNY 391
AQ+AV N +TKILLL+QSNC+ VR M DLLK+F+VN
Sbjct: 333 TEHAVTVLWSVCYLFKEKKAQDAVIRINGVTKILLLLQSNCSLTVRHMLTDLLKVFKVNS 392
Query: 392 KSCLASYDTKTTHIMPF 408
+SCL+ Y+TKTTHIMPF
Sbjct: 393 RSCLSVYETKTTHIMPF 409
>sp|Q84TG3|PUB23_ARATH E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana GN=PUB23
PE=1 SV=1
Length = 411
Score = 112 bits (281), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 108/417 (25%), Positives = 193/417 (46%), Gaps = 48/417 (11%)
Query: 5 DLYITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSG-NNTCPATMQVLQSKEF 63
D I +P FF CPISL++MK PV + TG+TYDR SI++WL +G N+CP T Q + +
Sbjct: 7 DEEIEIPPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDITDADL 66
Query: 64 VPNRTLQRLIQIWSDSVQHRVDSSESATGRPVVLSQDEVKDIIRVAISKNEDFSENLTKI 123
PN TL+RLIQ W ++ T RP + + E++ +IR + S +E+ + L ++
Sbjct: 67 TPNHTLRRLIQSWC-TLNASYGVERIPTPRPPI-CKSEIEKLIRDSASSHENQVKCLKRL 124
Query: 124 VAFAKESDENKTFLAKFDGLVVMLVEILSNVNDVNMLKQVIRVLDLILNKIEDQQHLMNL 183
E+ NK L + G+ L I+SN ++ L L+L+ + + L NL
Sbjct: 125 RQIVSENATNKRCL-EAAGVPEFLANIVSNDSENGSLTD--EALNLLYHLETSETVLKNL 181
Query: 184 ILKRDQDCLNSLLLVLKQQESVDSRIESLRLLEFIAGDADSKVKIAERDGLLAETVKSLS 243
+ + + + L + Q+ +SR+ + LL+ I AD + + + E V+ L
Sbjct: 182 LNNKKDNNIVKSLTKIMQRGMYESRVYATLLLKNILEVADPMQSMTLKPEVFTEVVQILD 241
Query: 244 LDSDRRLIEASLSCLITISSSKRAKTKLINHKLITELGKLITDGHNGNGSGNGNGNGNGN 303
++ +A++ L+ I R + K + +I+ + +L+ D S G
Sbjct: 242 DRISQKATKAAMHILVNICPWGRNRHKAVEAGVISVIIELLMD-----ESFTSERRG--- 293
Query: 304 GSGNGTVLITEKALRLVEILSTTKQGRMEICQDAALLNGVVQKMLKTAQEAVSSS----- 358
E A+ ++++L +GR E A + V +K+L+ +Q A +
Sbjct: 294 ---------PEMAMVVLDLLCQCAEGRAEFLNHGAAIAVVCKKILRVSQTASDRAVRVLL 344
Query: 359 ------------------NVLTKILLLMQSNCTPAVRQMSADLLKIFRVNYK--SCL 395
V+ K+ L++Q +C ++ + +LLK+ +K CL
Sbjct: 345 SVGRFCATPALLHEMLQLGVVAKLCLVLQVSCGGKTKEKAKELLKLHARVWKDSPCL 401
>sp|Q9LT79|PUB25_ARATH U-box domain-containing protein 25 OS=Arabidopsis thaliana GN=PUB25
PE=2 SV=1
Length = 421
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 182/408 (44%), Gaps = 73/408 (17%)
Query: 5 DLYITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNN-TCPATMQVLQSKEF 63
DL I +P FRCPISL++M+ PV++CTG TYDRASI+ W+ GNN TCP T L
Sbjct: 9 DLGIQIPYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLSDFTL 68
Query: 64 VPNRTLQRLIQIW-----SDSVQHRVDSSESA--TGRPVVLSQDEVKDIIRVAISKNEDF 116
+PN TL+RLIQ W S+ V+ + A T +LSQ V++
Sbjct: 69 IPNHTLRRLIQEWCVANRSNGVERIPTPKQPADPTSVRALLSQASAITGTHVSVRSR--- 125
Query: 117 SENLTKIVAFAKESDENKTFLAKFDGLVVMLVEILSNVNDVNMLKQVIRVLDLILNKIED 176
+ L ++ FA++SD+N+ +A + +++ + S ++ + + +L ++L E
Sbjct: 126 AAALRRLRGFARDSDKNRVLIAAHNATEILIKILFSETTSSELVSESLALL-VMLPITEP 184
Query: 177 QQHLMNLILKRDQDCLNSLLLVLKQQESVDSRIESLRLLEFIAG---DADSKVKIAERDG 233
Q + + L LL S+++R+ + L+E ++ AD K I+ +
Sbjct: 185 NQFVSISSDPGRVEFLTRLLF----DSSIETRVNAAALIEIVSTGTKSADLKGSISNSES 240
Query: 234 LLAETVKSL-SLDSDRRLIEASLSCLITISSSKRAKTKLINHKLITE------LGKLITD 286
+ + L + S RR ++ + L + S K + H IT + +L D
Sbjct: 241 VFEGVLDLLRNPISSRRALKIGIKTLFALCSVKSTR-----HIAITAGAPEILIDRLAAD 295
Query: 287 GHNGNGSGNGNGNGNGNGSGNGTVLITEKALRLVEILSTTKQGRMEICQDAALLNGVVQK 346
+ TE+AL VE+L T +G + A + +V+
Sbjct: 296 FDRCD---------------------TERALATVELLCRTPEGCAAFGEHALTVPLLVKT 334
Query: 347 MLKTA---------------------QEAVSSSNVLTKILLLMQSNCT 373
+L+ + +E + + V+ ++LL++QS CT
Sbjct: 335 ILRVSDRATEYAAGALLALCTAEERWREEAAGAGVVVQLLLMVQSECT 382
>sp|Q9C8D1|PUB20_ARATH U-box domain-containing protein 20 OS=Arabidopsis thaliana GN=PUB20
PE=2 SV=1
Length = 431
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 190/413 (46%), Gaps = 64/413 (15%)
Query: 4 DDLYITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEF 63
+++ IT+PS F+CPIS ++MK PV + +G+TYDR +I++W +SG TCP T VL S E
Sbjct: 27 EEVEITIPSQFQCPISYELMKDPVIIASGITYDRENIEKWFESGYQTCPVTNTVLTSLEQ 86
Query: 64 VPNRTLQRLIQIWSDSVQHRVDSSESATGRPVVLSQDEVKDIIR--VAISKNEDFS---E 118
+PN T++R+IQ W S E V ++ +V +I A ++ D++ E
Sbjct: 87 IPNHTIRRMIQGWCGSSLG--GGIERIPTPRVPVTSHQVSEICERLSAATRRGDYAACME 144
Query: 119 NLTKIVAFAKESDENKTFLAKFDGLVVMLV---EILSNVNDVNMLKQVIRVLDLILN-KI 174
+TK+ KES+ N+ + + +V+ V N N +L++ + VL +L +
Sbjct: 145 MVTKMTRLGKESERNRKCVKENGAGLVLCVCFDAFSENANASLLLEETVSVLTWMLPIGL 204
Query: 175 EDQQHLMNLILKRDQDCLNSLLLVLKQQESVDSRIESLRLLEFIAGDADSKVKIAERDGL 234
E Q L N L+ +L+ + ++ LLE + KI +G+
Sbjct: 205 EGQSKLTT------TSSFNRLVELLRNGDQ-NAAFLIKELLELNVTHVHALTKI---NGV 254
Query: 235 LAETVKSLSLDSDRRLIEASLSCLITISSSKRAKTKLINHKLITELGKLITDGHNGNGSG 294
+KS++ DS + + +S I +++ ++ + L+ +++ D N
Sbjct: 255 QEAFMKSINRDST--CVNSLISIHHMILTNQETVSRFLELDLVNITVEMLVDSENS---- 308
Query: 295 NGNGNGNGNGSGNGTVLITEKALRLVEILSTTKQGRMEICQDAALLNGVVQKMLKTAQ-- 352
+ EKAL ++ ++ TK+GR ++ ++ ++ +V+K+LK ++
Sbjct: 309 -----------------VCEKALTVLNVICETKEGREKVRRNKLVIPILVKKILKISEKK 351
Query: 353 ------------------EAVSSSNVLTKILLLMQSNCTPAVRQMSADLLKIF 387
E K+++++Q C ++ +LLK+
Sbjct: 352 DLVSVMWKVCKSGDGSEVEEALRLGAFKKLVVMLQVGCGEGTKEKVTELLKMM 404
>sp|Q9C7R6|PUB17_ARATH U-box domain-containing protein 17 OS=Arabidopsis thaliana GN=PUB17
PE=2 SV=1
Length = 729
Score = 104 bits (260), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 131/252 (51%), Gaps = 23/252 (9%)
Query: 5 DLYITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFV 64
D +ITVP F CPISLD+M PV + TG TYDR SI RW++ G+ TCP T Q+L V
Sbjct: 300 DTFITVPKDFVCPISLDLMTDPVIISTGQTYDRNSIARWIEEGHCTCPKTGQMLMDSRIV 359
Query: 65 PNRTLQRLIQIW--SDSVQHRVDSSES-----ATGRPVVLSQDEVKDIIRVAISKNEDFS 117
PNR L+ LI W + + + + ++S A+ P + + K + + I D S
Sbjct: 360 PNRALKNLIVQWCTASGISYESEFTDSPNESFASALPTKAAVEANKATVSILIKYLADGS 419
Query: 118 ENLTKIVA-----FAKESDENKTFLAKFDGLVVMLVEILSNVNDVNMLKQVIRVLDLILN 172
+ + A AK EN+ ++A+ G + L +L++ N + V +L+L +
Sbjct: 420 QAAQTVAAREIRLLAKTGKENRAYIAE-AGAIPHLCRLLTSENAIAQENSVTAMLNLSIY 478
Query: 173 KIEDQQHLMNLILKRDQDCLNSLLLVLKQQESVDSRIESLRLLEFIAGDADSKVKIAERD 232
+ +++ +M + DCL S++ VL +V+++ + L ++ + K +IA
Sbjct: 479 E-KNKSRIME-----EGDCLESIVSVLVSGLTVEAQENAAATLFSLSAVHEYKKRIA--- 529
Query: 233 GLLAETVKSLSL 244
++ + V++L+L
Sbjct: 530 -IVDQCVEALAL 540
>sp|Q6EUK7|PUB04_ORYSJ U-box domain-containing protein 4 OS=Oryza sativa subsp. japonica
GN=PUB4 PE=2 SV=1
Length = 728
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 83/163 (50%), Gaps = 13/163 (7%)
Query: 4 DDLYITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEF 63
DD +VP F CPISLD+M+ PV TG TYDR SI +W++ G++TCP + Q L
Sbjct: 291 DDTSFSVPKEFSCPISLDLMRDPVVASTGQTYDRPSIIQWIEEGHSTCPNSGQTLADHRL 350
Query: 64 VPNRTLQRLIQIWSDSVQHRVDSSESATGRPVVLSQ--------DEVKDIIRVAISKNED 115
VPNR L+ LI W + DS ES G ++ + K R+ + ED
Sbjct: 351 VPNRALRSLISQWCGVYGLQYDSPESNEGMAECVAASCSSRAAMEANKATARILVRMLED 410
Query: 116 FSENLTKIVA-----FAKESDENKTFLAKFDGLVVMLVEILSN 153
SEN+ + A AK +N+ F+A + ++ +LSN
Sbjct: 411 GSENVKAVAAKEIRLLAKTGKQNRAFIADLGAIPLLCRLLLSN 453
>sp|Q9FHN9|PUB31_ARATH U-box domain-containing protein 31 OS=Arabidopsis thaliana GN=PUB31
PE=2 SV=1
Length = 444
Score = 102 bits (254), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 114/423 (26%), Positives = 183/423 (43%), Gaps = 95/423 (22%)
Query: 10 VPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNRTL 69
+PS F CPISL+ M+ PV+LCTG TY+R++I +W + G+ TCP TMQ L PN+TL
Sbjct: 60 IPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNIGHCTCPTTMQELWDDLVTPNKTL 119
Query: 70 QRLIQIW-SDSVQHRVDSSESATGRPVVLSQDEVKDIIRVAISKNEDFSENLTKIVAFAK 128
+LI W S SE GR + E+ +R A K + + + K V A
Sbjct: 120 HQLIYTWFSQKYVLMKKRSEDVQGRAI-----EILGTLRKAKGKAKVHALSELKQVVMA- 173
Query: 129 ESDENKTFLAKFDGLVVMLVEILSNVNDVNMLKQVIRVLDLILNKIEDQQHLMNLILKRD 188
+ KT + +G V ++ +LS + + I + L+NL L D
Sbjct: 174 HAIAKKTVVD--EGGVFVISSLLSPFTSHAVGSEAIAI-------------LVNLELDSD 218
Query: 189 ------QDCLNSLLLVLKQQESVDSRIESLRLLEFIAGDADSKVKIAERDGLLAETVKSL 242
Q SL++ + S++++I RL+ ++ E G AE V S
Sbjct: 219 SKAGLMQPARVSLMVDMLNDGSIETKINCARLIG----------RLVEEKGFRAELVSSH 268
Query: 243 S-------LDSDRRL---IEASLSCLITISSSKRAKTKLINHKLITELGKLITDGHNGNG 292
S L DRR + +L+ L ++S K+ + L+ + +L ++
Sbjct: 269 SLLVGLMRLVKDRRRRNGVSPALTLLKSVSVHKQVRNLLVRIGAVPQLVDVLP------- 321
Query: 293 SGNGNGNGNGNGSGNGTVLITEKALRLVEILSTTKQGRM--------------------E 332
V E AL +++ L +GR+ E
Sbjct: 322 --------------CLDVECLESALFVLDSLCLESEGRIALKDSVNTIPHTVRLLMKVSE 367
Query: 333 ICQDAALLNGVVQKMLKTAQEAVSSSNV----LTKILLLMQSNCTPAVRQMSADLLKIFR 388
C + A+ ++ + K A E SS V K+LL++QS C PA++Q SA+LLK+
Sbjct: 368 KCTNYAI--SILWSVCKLASEECSSLAVEVGLAAKLLLVIQSGCDPALKQRSAELLKLCS 425
Query: 389 VNY 391
++Y
Sbjct: 426 LHY 428
>sp|Q9SVC6|PUB22_ARATH E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana GN=PUB22
PE=1 SV=1
Length = 435
Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 87/153 (56%), Gaps = 4/153 (2%)
Query: 5 DLYITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSG-NNTCPATMQVLQSKEF 63
D I +PSFF CPISLD+MK PV + TG+TYDR SI++WL SG N+CP T QV+ +
Sbjct: 2 DQEIEIPSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETDL 61
Query: 64 VPNRTLQRLIQIWSDSVQHRVDSSESATGRPVVLSQDEVKDIIRVAISKNEDFSENLTKI 123
PN TL+RLIQ W ++ T +P + + E++ +I+ + S + + + L ++
Sbjct: 62 TPNHTLRRLIQSWC-TLNASYGIERIPTPKPPI-CKSEIEKLIKESSSSHLNQVKCLKRL 119
Query: 124 VAFAKESDENKTFLAKFDGLVVMLVEILSNVND 156
E+ NK L + + L I+SN D
Sbjct: 120 RQIVSENTTNKRCLEAAE-VPEFLANIVSNSVD 151
>sp|Q8VZ40|PUB14_ARATH U-box domain-containing protein 14 OS=Arabidopsis thaliana GN=PUB14
PE=1 SV=1
Length = 632
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 93/177 (52%), Gaps = 19/177 (10%)
Query: 10 VPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNRTL 69
+P +FRCPISL++MK PV + TG TY+R+SIQ+WLD+G+ TCP + + L PN L
Sbjct: 248 IPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPNYVL 307
Query: 70 QRLIQIWSDSVQHRVD-------------SSESATGRPVVLSQDEVKDIIRVAISKNEDF 116
+ LI +W +S + SS S R VLS E ++A E
Sbjct: 308 KSLIALWCESNGIELPQNQGSCRTTKIGGSSSSDCDRTFVLSLLE-----KLANGTTEQQ 362
Query: 117 SENLTKIVAFAKESDENKTFLAKFDGLVVMLVEILSNVNDVNMLKQVIRVLDLILNK 173
++ AK + +N+ +A+ G + +LVE+LS+ + V +L+L +N+
Sbjct: 363 RAAAGELRLLAKRNVDNRVCIAEA-GAIPLLVELLSSPDPRTQEHSVTALLNLSINE 418
>sp|Q5PNY6|PUB21_ARATH U-box domain-containing protein 21 OS=Arabidopsis thaliana
GN=PUB21 PE=2 SV=1
Length = 435
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 53/69 (76%)
Query: 8 ITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNR 67
IT+P F+CPIS+D+MK PV + TG+TYDR SI+ W++SGN TCP T VL + + +PN
Sbjct: 29 ITIPPEFQCPISIDLMKDPVIISTGITYDRVSIETWINSGNKTCPVTNTVLTTFDQIPNH 88
Query: 68 TLQRLIQIW 76
T++++IQ W
Sbjct: 89 TIRKMIQGW 97
Score = 32.3 bits (72), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Query: 312 ITEKALRLVEILSTTKQGRMEICQDAALLNGVVQKMLKTAQEAVSSSNVLTKILLLMQSN 371
+ EKAL +++ + T+ GR E+ ++A ++ +V+K+ K ++ A SS ++ IL L ++
Sbjct: 314 VCEKALAVLDAICETEHGREEVRKNALVMPLLVKKIAKVSELATRSS--MSMILKLWKTG 371
Query: 372 CTPAV 376
T AV
Sbjct: 372 NTVAV 376
>sp|Q9FXA4|PUB26_ARATH U-box domain-containing protein 26 OS=Arabidopsis thaliana GN=PUB26
PE=2 SV=1
Length = 421
Score = 92.8 bits (229), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 81/154 (52%), Gaps = 11/154 (7%)
Query: 5 DLYITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFV 64
DL I +P FRCPISLD+M PV++ TG TYDR SI W+ GN TCP T L +
Sbjct: 9 DLGIQIPYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTTCPVTRVALSDFTLI 68
Query: 65 PNRTLQRLIQIW-----SDSVQHRVDSSESATGRPV--VLSQDEVKDIIRVAISKNEDFS 117
PN TL+RLIQ W S+ V+ + A V +LSQ V++ +
Sbjct: 69 PNHTLRRLIQEWCVANRSNGVERIPTPKQPADPISVRSLLSQASAITGTHVSVRSR---A 125
Query: 118 ENLTKIVAFAKESDENKTFLAKFDGLVVMLVEIL 151
+ ++ A++S++N+ +A + + LV IL
Sbjct: 126 AAIRRLRGLARDSEKNRVLIAGHNAREI-LVRIL 158
>sp|Q8GUG9|PUB11_ARATH U-box domain-containing protein 11 OS=Arabidopsis thaliana GN=PUB11
PE=2 SV=2
Length = 612
Score = 92.4 bits (228), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 89/167 (53%), Gaps = 10/167 (5%)
Query: 8 ITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNR 67
+T+P F CP+SL++MK PV + TG TY+RA IQRW+D GN TCP T Q L++ PN
Sbjct: 239 LTIPVDFLCPVSLELMKDPVIVATGQTYERAYIQRWIDCGNLTCPKTQQKLENFTLTPNY 298
Query: 68 TLQRLIQIWSDSVQHRVDSSESATGRPVVLSQDEVKDIIRVAISK-----NEDFSENLTK 122
L+ LI W +H ++ S D +IR + + ED +++
Sbjct: 299 VLRSLISRW--CAEHNIEQPAGYINGRTKNSGD--MSVIRALVQRLSSRSTEDRRNAVSE 354
Query: 123 IVAFAKESDENKTFLAKFDGLVVMLVEILSNVNDVNMLKQVIRVLDL 169
I + +K S +N+ +A+ G + +LV +L++ + + VL+L
Sbjct: 355 IRSLSKRSTDNRILIAEA-GAIPVLVNLLTSEDVATQENAITCVLNL 400
>sp|Q681N2|PUB15_ARATH U-box domain-containing protein 15 OS=Arabidopsis thaliana GN=PUB15
PE=2 SV=2
Length = 660
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 83/150 (55%), Gaps = 11/150 (7%)
Query: 8 ITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNR 67
+ +P F CPI+L++M PV + TG TY++ SIQ+W D+G+ TCP T Q L PN
Sbjct: 288 LILPHEFLCPITLEIMLDPVIIATGQTYEKESIQKWFDAGHKTCPKTRQELDHLSLAPNF 347
Query: 68 TLQRLIQIWSDSVQHRVDSSESATGRPVVLSQDEVKDIIRVAI-----SKNEDFSENLTK 122
L+ LI W + ++ E + SQ+E KD + + + S+ E+ ++ +
Sbjct: 348 ALKNLIMQWCEKNNFKIPEKEVSPD-----SQNEQKDEVSLLVEALSSSQLEEQRRSVKQ 402
Query: 123 IVAFAKESDENKTFLAKFDGLVVMLVEILS 152
+ A+E+ EN+ +A G + +LV++LS
Sbjct: 403 MRLLARENPENRVLIANA-GAIPLLVQLLS 431
>sp|Q9LZW3|PUB16_ARATH U-box domain-containing protein 16 OS=Arabidopsis thaliana GN=PUB16
PE=2 SV=1
Length = 674
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 49/67 (73%)
Query: 10 VPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNRTL 69
+P+ FRCPI+L++M+ PV + TG TYDR SI W+ SG+NTCP T QVL+ VPNR L
Sbjct: 274 IPADFRCPITLELMRDPVVVATGQTYDRESIDLWIQSGHNTCPKTGQVLKHTSLVPNRAL 333
Query: 70 QRLIQIW 76
+ LI +W
Sbjct: 334 KNLIVLW 340
>sp|Q9C9A6|PUB10_ARATH U-box domain-containing protein 10 OS=Arabidopsis thaliana GN=PUB10
PE=2 SV=1
Length = 628
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 149/323 (46%), Gaps = 59/323 (18%)
Query: 8 ITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNR 67
+T+P F CPISL++MK P + TG TY+R+ IQRW+D GN +CP T Q L++ PN
Sbjct: 241 LTIPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPKTQQKLENFTLTPNY 300
Query: 68 TLQRLIQIWSDSVQHRVDSSESATGRPVVLSQDEVKDI------IRVAISK-----NEDF 116
L+ LI W +H ++ S +D+ IR + K ED
Sbjct: 301 VLRSLISQW--CTKHNIEQPGGYMNGRTKNSDGSFRDLSGDMSAIRALVCKLSSQSIEDR 358
Query: 117 SENLTKIVAFAKESDENKTFLAKFDGLVVMLVEILSNVNDVNMLKQVIRVLDLILNKIED 176
+++I + +K S +N+ +A+ G + +LV++L++ D + + + L L+ E
Sbjct: 359 RTAVSEIRSLSKRSTDNRILIAEA-GAIPVLVKLLTSDGDTETQENAVTCI-LNLSIYEH 416
Query: 177 QQHLMNLILKRDQDCLNSLLLVLK-----QQESVDSRIESLR------------------ 213
+ L+ L + S++LVL+ +E+ + + SL
Sbjct: 417 NKELIML-----AGAVTSIVLVLRAGSMEARENAAATLFSLSLADENKIIIGASGAIMAL 471
Query: 214 --LLEF--IAGDADSKVKI------------AERDGLLAETVKSLSLDSDRRLIEASLSC 257
LL++ + G D+ + A R G++ VK L+ S R+ + +L+
Sbjct: 472 VDLLQYGSVRGKKDAATALFNLCIYQGNKGRAVRAGIVKPLVKMLTDSSSERMADEALTI 531
Query: 258 LITISSSKRAKTKLINHKLITEL 280
L ++S++ AKT ++ I L
Sbjct: 532 LSVLASNQVAKTAILRANAIPPL 554
>sp|Q0IMG9|SL11_ORYSJ E3 ubiquitin-protein ligase SPL11 OS=Oryza sativa subsp. japonica
GN=SPL11 PE=1 SV=2
Length = 694
Score = 88.6 bits (218), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 51/76 (67%)
Query: 4 DDLYITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEF 63
D IT+P FRCPISL++MK PV + TG TY+RA I++W+ SG++TCP T Q + +
Sbjct: 267 DSRPITIPDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSAL 326
Query: 64 VPNRTLQRLIQIWSDS 79
PN L+ LI W ++
Sbjct: 327 TPNYVLRSLISQWCET 342
>sp|A2ZLU6|SL11_ORYSI Protein spotted leaf 11 OS=Oryza sativa subsp. indica GN=SPL11 PE=1
SV=2
Length = 694
Score = 88.6 bits (218), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 51/76 (67%)
Query: 4 DDLYITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEF 63
D IT+P FRCPISL++MK PV + TG TY+RA I++W+ SG++TCP T Q + +
Sbjct: 267 DSRPITIPDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSAL 326
Query: 64 VPNRTLQRLIQIWSDS 79
PN L+ LI W ++
Sbjct: 327 TPNYVLRSLISQWCET 342
>sp|Q9SNC6|PUB13_ARATH U-box domain-containing protein 13 OS=Arabidopsis thaliana GN=PUB13
PE=1 SV=1
Length = 660
Score = 88.6 bits (218), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 84/151 (55%), Gaps = 10/151 (6%)
Query: 10 VPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNRTL 69
+P FRCPISL++M+ PV + +G TY+R I++W++ G++TCP T Q L S PN L
Sbjct: 256 IPDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHSTCPKTQQALTSTTLTPNYVL 315
Query: 70 QRLIQIWSDSVQHRVDSSESATGRPVVLSQ-------DEVKDII-RVAISKNEDFSENLT 121
+ LI W ++ S+ RP +S ++++D++ R+A ED
Sbjct: 316 RSLIAQWCEANDIEPPKPPSSL-RPRKVSSFSSPAEANKIEDLMWRLAYGNPEDQRSAAG 374
Query: 122 KIVAFAKESDENKTFLAKFDGLVVMLVEILS 152
+I AK + +N+ +A+ G + +LV +LS
Sbjct: 375 EIRLLAKRNADNRVAIAEA-GAIPLLVGLLS 404
>sp|Q058P4|PUB30_ARATH U-box domain-containing protein 30 OS=Arabidopsis thaliana GN=PUB30
PE=2 SV=1
Length = 448
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 63/112 (56%), Gaps = 15/112 (13%)
Query: 10 VPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNRTL 69
+PS F CPISL+ M+ PV+LCTG TY+R +I +W + G+ TCP TMQ L PN+TL
Sbjct: 64 IPSVFICPISLEPMQDPVTLCTGQTYERLNIHKWFNLGHLTCPTTMQELWDDTVTPNKTL 123
Query: 70 QRLIQIW-----------SDSVQHR----VDSSESATGRPVVLSQDEVKDII 106
LI W S+ VQ R + + + A G+ V + E+K I+
Sbjct: 124 HHLIYTWFSQKYVLMKKRSEDVQGRAIEILGTLKKAKGQARVHALSELKQIV 175
Score = 34.3 bits (77), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
Query: 332 EICQDAALLNGVVQKMLKTAQEAVSSSNV----LTKILLLMQSNCTPAVRQMSADLLKIF 387
E C + AL ++ + K A E S V K+LL++QS C A++Q SA+LLK+
Sbjct: 371 ENCTNYAL--SILWSVCKLAPEECSPLAVEVGLAAKLLLVIQSGCDAALKQRSAELLKLC 428
Query: 388 RVNY 391
++Y
Sbjct: 429 SLHY 432
>sp|Q8GWV5|PUB3_ARATH U-box domain-containing protein 3 OS=Arabidopsis thaliana GN=PUB3
PE=2 SV=2
Length = 760
Score = 85.5 bits (210), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 49/69 (71%)
Query: 8 ITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNR 67
I++P +FRCP+S ++M PV + +G T+DR SI++WLD+G CP T QVL +E +PN
Sbjct: 236 ISIPPYFRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPRTRQVLTHQELIPNY 295
Query: 68 TLQRLIQIW 76
T++ +I W
Sbjct: 296 TVKAMIASW 304
>sp|Q5VRH9|PUB12_ORYSJ U-box domain-containing protein 12 OS=Oryza sativa subsp. japonica
GN=PUB12 PE=2 SV=1
Length = 611
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 47/70 (67%)
Query: 10 VPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNRTL 69
+P FRCPISL++M+ PV + +G TY+R+ IQ+WLDSG+ TCP T Q L PN L
Sbjct: 228 IPDEFRCPISLELMQDPVIVSSGQTYERSCIQKWLDSGHKTCPKTQQPLSHTSLTPNFVL 287
Query: 70 QRLIQIWSDS 79
+ LI W ++
Sbjct: 288 KSLISQWCEA 297
>sp|Q9SRT0|PUB9_ARATH U-box domain-containing protein 9 OS=Arabidopsis thaliana GN=PUB9
PE=1 SV=1
Length = 460
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 44/69 (63%)
Query: 8 ITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNR 67
++ P FRCP+S ++M+ PV L +G TYD+ IQ+WL SGN TCP T QVL PN
Sbjct: 72 VSCPEEFRCPLSNELMRDPVVLASGQTYDKLFIQKWLSSGNRTCPKTQQVLPHTALTPNL 131
Query: 68 TLQRLIQIW 76
++ +I W
Sbjct: 132 LIREMISKW 140
>sp|Q9ZV31|PUB12_ARATH U-box domain-containing protein 12 OS=Arabidopsis thaliana GN=PUB12
PE=2 SV=1
Length = 654
Score = 79.0 bits (193), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 77/156 (49%), Gaps = 11/156 (7%)
Query: 11 PSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNRTLQ 70
P FRCPISL++M PV + +G TY+R I++WL+ G+ TCP T + L S PN L+
Sbjct: 257 PEEFRCPISLELMTDPVIVSSGQTYERECIKKWLEGGHLTCPKTQETLTSDIMTPNYVLR 316
Query: 71 RLIQIWSDS------VQHRVDSSESATGRPVVLSQDEVKDI----IRVAISKNEDFSENL 120
LI W +S + + S DE I +++ + ED
Sbjct: 317 SLIAQWCESNGIEPPKRPNISQPSSKASSSSSAPDDEHNKIEELLLKLTSQQPEDRRSAA 376
Query: 121 TKIVAFAKESDENKTFLAKFDGLVVMLVEILSNVND 156
+I AK+++ N+ +A G + +LV +L+ ND
Sbjct: 377 GEIRLLAKQNNHNRVAIAA-SGAIPLLVNLLTISND 411
>sp|O81902|PUB8_ARATH U-box domain-containing protein 8 OS=Arabidopsis thaliana GN=PUB8
PE=2 SV=1
Length = 374
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 10 VPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPAT-MQVLQSKEFVPNRT 68
+P+ FRCPISL++M PV L +G T+DR SIQ+W+DSGN TCP T + + ++ +PN
Sbjct: 5 LPNDFRCPISLEIMSDPVILQSGHTFDRVSIQQWIDSGNRTCPITKLPLSETPYLIPNHA 64
Query: 69 LQRLI 73
L+ LI
Sbjct: 65 LRSLI 69
>sp|Q9SF15|PUB24_ARATH E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis thaliana
GN=PUB24 PE=1 SV=1
Length = 456
Score = 75.5 bits (184), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 1 MVRDDLYITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQ- 59
M +++ I +P++F CPISL++MK PV+ +G+TYDR +I +WL+ +CP T Q L
Sbjct: 1 MDQEEEEIEIPNYFICPISLEIMKDPVTTVSGITYDRQNIVKWLEK-VPSCPVTKQPLPL 59
Query: 60 SKEFVPNRTLQRLIQIW 76
+ PN L+RLIQ W
Sbjct: 60 DSDLTPNHMLRRLIQHW 76
>sp|Q9CAG5|PUB7_ARATH U-box domain-containing protein 7 OS=Arabidopsis thaliana GN=PUB7
PE=2 SV=1
Length = 782
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 56/104 (53%), Gaps = 9/104 (8%)
Query: 11 PSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNRTLQ 70
P RCPISL +M PV + +G TY+R I++W G+NTCP T Q L PN ++
Sbjct: 273 PEELRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQQLPHISLTPNNCVK 332
Query: 71 RLIQIWSDSVQHRVDSSESATGRPVVLSQDEVKDIIRVAISKNE 114
LI W + + ++ +G P SQD D R+A+S +E
Sbjct: 333 GLIASWCEQ-----NGTQIPSGPPE--SQD--LDYWRLALSDSE 367
>sp|Q9C7G1|PUB45_ARATH U-box domain-containing protein 45 OS=Arabidopsis thaliana GN=PUB45
PE=1 SV=1
Length = 768
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 27/205 (13%)
Query: 11 PSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNRTLQ 70
P RCPISL +M PV + +G TY+R I++W G+NTCP T Q L PN ++
Sbjct: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWFSDGHNTCPKTHQQLSHLCLTPNYCVK 339
Query: 71 RLIQIWSDSVQHRVDSSESATGRPVVLSQDEVKDIIRVAISKNEDFSENLTKIVAFAKES 130
LI W + + + G P L + R+A+S +E K V K
Sbjct: 340 ALISSWCEQ-----NGVQVPDGPPESLDL----NYWRLALSVSESTDTRSAKRVGSCKLK 390
Query: 131 D------------ENKTFLAKFDGLVVMLV----EILSNVNDVNMLKQVIRVLDLILNKI 174
D + + +++ V LV E+L+ + DV+ L++ RV++ I +
Sbjct: 391 DVKVVPLEESGTIKEEACESEYQEDQVTLVERCTELLTTLTDVDTLRKKCRVVEQIRVLL 450
Query: 175 EDQQHLMNLILKRDQDCLNSLLLVL 199
+D + IL + C+ +LL L
Sbjct: 451 KDDEEAR--ILMGENGCVEALLQFL 473
>sp|O80742|PUB19_ARATH U-box domain-containing protein 19 OS=Arabidopsis thaliana GN=PUB19
PE=2 SV=1
Length = 686
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%)
Query: 14 FRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNRTLQRLI 73
RCPISL++M PV L +G TYDR+SI +W SGN TCP T + L S V N +++++I
Sbjct: 282 LRCPISLEIMSDPVVLESGHTYDRSSITKWFASGNITCPKTGKTLVSTVLVDNFSVKQVI 341
Query: 74 QIWS 77
Q +S
Sbjct: 342 QSYS 345
>sp|Q9XIJ5|PUB18_ARATH U-box domain-containing protein 18 OS=Arabidopsis thaliana GN=PUB18
PE=2 SV=1
Length = 697
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 43/59 (72%)
Query: 16 CPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNRTLQRLIQ 74
CPISL++M PV + TG TYDR+SI +W SGN TCP T ++L S E V N +++++I+
Sbjct: 294 CPISLEIMTDPVVIETGHTYDRSSITKWFGSGNITCPITGKILTSTELVDNVSVRQVIR 352
>sp|O22193|PUB4_ARATH U-box domain-containing protein 4 OS=Arabidopsis thaliana GN=PUB4
PE=1 SV=3
Length = 826
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%)
Query: 14 FRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNRTLQRLI 73
F CP+SL+VM PV + +G TY++A I+RW+D G CP T Q L +PN T++ LI
Sbjct: 234 FFCPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLKVCPKTRQTLTHTTLIPNYTVKALI 293
Query: 74 QIWSDS 79
W ++
Sbjct: 294 ANWCET 299
>sp|O48700|PUB6_ARATH U-box domain-containing protein 6 OS=Arabidopsis thaliana GN=PUB6
PE=2 SV=2
Length = 771
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 39/68 (57%)
Query: 11 PSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNRTLQ 70
P RCPISL +M PV + +G TY+R I++W G+N+CP T Q L PN ++
Sbjct: 276 PEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNSCPKTQQQLPHLSLTPNYCVK 335
Query: 71 RLIQIWSD 78
LI W +
Sbjct: 336 GLIASWCE 343
>sp|Q683D5|PUB37_ARATH U-box domain-containing protein 37 OS=Arabidopsis thaliana GN=PUB37
PE=2 SV=1
Length = 400
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 39/74 (52%)
Query: 3 RDDLYITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKE 62
R D + P +F CPISL+VMK P G TY+ +I WL G+ T P T L +
Sbjct: 318 RSDEHREAPQYFICPISLEVMKDPQLAADGFTYEAEAISTWLQGGHETSPMTNTKLHHTK 377
Query: 63 FVPNRTLQRLIQIW 76
VPN L+ IQ W
Sbjct: 378 LVPNLALRSAIQEW 391
>sp|P0C6E7|PUB55_ARATH Putative U-box domain-containing protein 55 OS=Arabidopsis thaliana
GN=PUB55 PE=3 SV=1
Length = 568
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 38/66 (57%)
Query: 11 PSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNRTLQ 70
PS+F CPIS +VM+ P G TY+ S++ WLD+G+ T P T L VPN L+
Sbjct: 498 PSYFICPISQEVMREPRVAADGFTYEAESLREWLDNGHETSPMTNLKLAHNNLVPNHALR 557
Query: 71 RLIQIW 76
IQ W
Sbjct: 558 SAIQEW 563
>sp|D1FP53|LIN_MEDTR Putative E3 ubiquitin-protein ligase LIN OS=Medicago truncatula
GN=LIN PE=2 SV=1
Length = 1488
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 11 PSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVP--NRT 68
P F CPI+ + PV+L TG TY+R +IQ WL +GN TCP T Q L S +P N
Sbjct: 514 PKDFVCPITGQIFSDPVTLETGQTYERKAIQEWLGTGNTTCPITRQAL-SANILPKTNYV 572
Query: 69 LQRLIQIWSD 78
L+RLI W +
Sbjct: 573 LKRLIVSWKE 582
>sp|Q5XEZ8|PUB2_ARATH U-box domain-containing protein 2 OS=Arabidopsis thaliana GN=PUB2
PE=2 SV=1
Length = 707
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%)
Query: 8 ITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNR 67
+ VPS FRC +SL++M PV + +G T++R IQ+W+D G CP T Q L PN
Sbjct: 238 VRVPSDFRCSLSLELMTDPVIVASGQTFERVFIQKWIDMGLMVCPKTRQALSHTTLTPNF 297
Query: 68 TLQRLIQIWSDS 79
++ + W ++
Sbjct: 298 IVRAFLASWCET 309
>sp|C6L7U1|LIN1_LOTJA Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus japonicus
GN=CERBERUS PE=2 SV=2
Length = 1485
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 11 PSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVP--NRT 68
P F CPI+ + PV+L TG TY+R +IQ WL +GN TCP T Q L S +P N
Sbjct: 512 PKDFVCPITGQIFCDPVTLETGQTYERKAIQEWLRTGNTTCPITRQPL-SASILPKTNYV 570
Query: 69 LQRLIQIWSD 78
L+RLI W +
Sbjct: 571 LKRLITSWKE 580
>sp|D1FP57|LIN2_LOTJA Putative E3 ubiquitin-protein ligase LIN-2 OS=Lotus japonicus
GN=LIN PE=1 SV=1
Length = 1485
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 11 PSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVP--NRT 68
P F CPI+ + PV+L TG TY+R +IQ WL +GN TCP T Q L S +P N
Sbjct: 512 PKDFVCPITGQIFCDPVTLETGQTYERKAIQEWLRTGNTTCPITRQPL-SASILPKTNYV 570
Query: 69 LQRLIQIWSD 78
L+RLI W +
Sbjct: 571 LKRLITSWKE 580
>sp|Q9LQ92|PUB54_ARATH U-box domain-containing protein 54 OS=Arabidopsis thaliana GN=PUB54
PE=2 SV=1
Length = 308
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 14 FRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNRTLQRLI 73
F+CPIS+++M+ P G TY+ ++WL SG T P T + L++ VPN TL+ +I
Sbjct: 237 FKCPISMEIMRDPHVAADGFTYEAEEFRKWLRSGGRTSPKTNKPLENHNLVPNHTLRIII 296
Query: 74 QIW 76
+ W
Sbjct: 297 KDW 299
>sp|Q9FGD7|PUB50_ARATH Putative U-box domain-containing protein 50 OS=Arabidopsis thaliana
GN=PUB50 PE=3 SV=1
Length = 765
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 39/67 (58%)
Query: 10 VPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNRTL 69
+PS F CPI +VMK+P G +Y+ +IQ WL G++T P T L + PN TL
Sbjct: 689 IPSVFMCPILQEVMKNPHVAADGFSYELEAIQEWLSMGHDTSPMTNLRLDYQMLTPNHTL 748
Query: 70 QRLIQIW 76
+ LIQ W
Sbjct: 749 RSLIQDW 755
>sp|A0AUS0|WSDU1_DANRE WD repeat, SAM and U-box domain-containing protein 1 OS=Danio rerio
GN=wdsub1 PE=2 SV=1
Length = 487
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 42/74 (56%)
Query: 6 LYITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVP 65
+Y P F CPI+ ++MK PV G +Y+R +I+ W+ + N T P T LQ+ P
Sbjct: 413 VYNGTPDEFLCPITREIMKDPVIAADGYSYEREAIEAWISTKNRTSPMTNLPLQTTLLTP 472
Query: 66 NRTLQRLIQIWSDS 79
NRTL+ I WS S
Sbjct: 473 NRTLKMAIFRWSTS 486
>sp|Q9SGT1|PUB57_ARATH U-box domain-containing protein 57 OS=Arabidopsis thaliana GN=PUB57
PE=2 SV=2
Length = 391
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 38/64 (59%)
Query: 11 PSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNRTLQ 70
P F CPI+ DVMK+P G TY+ +IQ+W+++G+ T P T L F PNR L+
Sbjct: 324 PPSFICPITQDVMKNPHMAADGFTYELEAIQKWINTGHRTSPMTNLKLSHFSFFPNRALR 383
Query: 71 RLIQ 74
I+
Sbjct: 384 SAIE 387
>sp|Q8GZ84|PUB36_ARATH U-box domain-containing protein 36 OS=Arabidopsis thaliana GN=PUB36
PE=2 SV=2
Length = 435
Score = 62.4 bits (150), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%)
Query: 11 PSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNRTLQ 70
P +F CPI+ D+M+ P G TY+ +I RW + G+ T P + L VPN L+
Sbjct: 354 PQYFICPITHDIMEDPHVAADGFTYEGEAISRWFERGHETSPMINKRLPHTSLVPNLALR 413
Query: 71 RLIQIW 76
IQ W
Sbjct: 414 SAIQEW 419
>sp|Q9SGT2|PUB58_ARATH Putative U-box domain-containing protein 58 OS=Arabidopsis thaliana
GN=PUB58 PE=2 SV=3
Length = 420
Score = 62.0 bits (149), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 37/64 (57%)
Query: 11 PSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNRTLQ 70
PS F CPI+ +VMK P G TY+ SI++WL +G+ T P T L VPNR L+
Sbjct: 354 PSSFFCPITQEVMKDPHFAADGFTYEAESIRKWLSTGHQTSPMTNLRLSHLTLVPNRALR 413
Query: 71 RLIQ 74
I+
Sbjct: 414 SAIE 417
>sp|O23225|PUB5_ARATH U-box domain-containing protein 5 OS=Arabidopsis thaliana GN=PUB5
PE=2 SV=3
Length = 718
Score = 62.0 bits (149), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%)
Query: 9 TVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNRT 68
T+P F+C +S VM PV + +G T++R IQ+W D GN++CP + + L PN
Sbjct: 218 TLPEKFKCTLSRTVMYDPVIISSGNTFERMQIQKWFDEGNDSCPISKRKLDDFTLKPNVE 277
Query: 69 LQRLIQIW 76
L+ I W
Sbjct: 278 LKSQISEW 285
>sp|Q9LU47|PUB53_ARATH Putative U-box domain-containing protein 53 OS=Arabidopsis thaliana
GN=PUB53 PE=3 SV=1
Length = 819
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 11 PSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNRTLQ 70
PS F CP+ DVMK P G TYDR +I+ W++ + T P T LQ+ +PN TL
Sbjct: 750 PSHFFCPLLKDVMKEPCIAADGYTYDRRAIEEWME-NHRTSPVTNSPLQNVNLLPNHTLY 808
Query: 71 RLIQIWSDSVQ 81
I W + Q
Sbjct: 809 AAIVEWRNRNQ 819
>sp|Q9SW11|PUB35_ARATH U-box domain-containing protein 35 OS=Arabidopsis thaliana GN=PUB35
PE=1 SV=2
Length = 835
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 11 PSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNRTLQ 70
P+ F CP+ DVM P G TYDR +I+ WL +NT P T L SK +PN TL
Sbjct: 767 PTHFICPLLKDVMNEPCVAADGYTYDRHAIEEWLKE-HNTSPMTDSPLHSKNLLPNYTLY 825
Query: 71 RLIQIW 76
I W
Sbjct: 826 TAIMEW 831
>sp|Q94A51|PUB32_ARATH U-box domain-containing protein 32 OS=Arabidopsis thaliana GN=PUB32
PE=2 SV=1
Length = 805
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%)
Query: 11 PSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNRTLQ 70
PS + CPI +VMK P+ G TY+ +I+ WL +G++T P T ++ +PN L
Sbjct: 736 PSHYLCPIFQEVMKDPLIAADGFTYEAEAIREWLANGHDTSPMTNLKMEDCNLIPNHALH 795
Query: 71 RLIQIWSD 78
IQ W +
Sbjct: 796 LAIQDWQN 803
>sp|Q8GXQ7|PUB56_ARATH U-box domain-containing protein 56 OS=Arabidopsis thaliana GN=PUB56
PE=2 SV=1
Length = 365
Score = 58.9 bits (141), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%)
Query: 8 ITVPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGNNTCPATMQVLQSKEFVPNR 67
I P F CPIS D+M++P G TY+ +RWL+ G P T L+++ +PN
Sbjct: 292 IEPPQCFICPISKDIMQNPHVAADGYTYEADEFRRWLNHGGEKSPMTNLRLENRNLIPNL 351
Query: 68 TLQRLIQIW 76
L+ I+ W
Sbjct: 352 VLRSAIKDW 360
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.363
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 134,077,006
Number of Sequences: 539616
Number of extensions: 5412371
Number of successful extensions: 74487
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 233
Number of HSP's successfully gapped in prelim test: 170
Number of HSP's that attempted gapping in prelim test: 66695
Number of HSP's gapped (non-prelim): 6631
length of query: 408
length of database: 191,569,459
effective HSP length: 120
effective length of query: 288
effective length of database: 126,815,539
effective search space: 36522875232
effective search space used: 36522875232
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)