BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036342
(596 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 99/268 (36%), Positives = 145/268 (54%), Gaps = 8/268 (2%)
Query: 61 LEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIP-STFGNLRNLEQLGLDENYL 119
L L L GN+F G +P F + S L L+L N+FSG +P T +R L+ L L N
Sbjct: 293 LTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEF 352
Query: 120 TSSTPELSFLSSLSN-CKSLTLIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCNISGGI 178
+ PE SL+N SL +DLS+N G + N +L+E Y+ N +G I
Sbjct: 353 SGELPE-----SLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKI 407
Query: 179 PEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYR 238
P +SN + LV + L N L+G+IP +LG L KL+ L L N+LEG IP ++ + L
Sbjct: 408 PPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLET 467
Query: 239 LELGSNKLYGSIPACFGNLASLRILSLGSNKLTS-IPLTFWNLKDILQLNFSSNFLTGPL 297
L L N L G IP+ N +L +SL +N+LT IP L+++ L S+N +G +
Sbjct: 468 LILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNI 527
Query: 298 LLEIGNLKVLIGIDFSMNNFSGVIPREI 325
E+G+ + LI +D + N F+G IP +
Sbjct: 528 PAELGDCRSLIWLDLNTNLFNGTIPAAM 555
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 112/374 (29%), Positives = 161/374 (43%), Gaps = 61/374 (16%)
Query: 61 LEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLT 120
L++LYL N F+G IP + N S+L L L N SG IPS+ G+L L L L N L
Sbjct: 393 LQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLE 452
Query: 121 SSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCNISGGIPE 180
P+ L K+L + L N L G +P + +SN + +L + N ++G IP+
Sbjct: 453 GEIPQ-----ELMYVKTLETLILDFNDLTGEIP-SGLSNCT-NLNWISLSNNRLTGEIPK 505
Query: 181 EISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLE 240
I L NL + L N +G+IP LG R L L+L N+ G+IP + + +
Sbjct: 506 WIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAAN 565
Query: 241 LGSNKLY------GSIPACFGNLASLRILSLGSNKLTSIPL-----------------TF 277
+ K Y G C G L + S +L + TF
Sbjct: 566 FIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTF 625
Query: 278 WNLKDILQLNFSSNFLTGPLLLEIGNLKVLIGIDFSMNNFSGVIPREIGE---------- 327
N ++ L+ S N L+G + EIG++ L ++ N+ SG IP E+G+
Sbjct: 626 DNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLS 685
Query: 328 -------------KLSYLEDLNLSFNKLKGEIPRGGSFGNFSAESFEGNELLCGSPNLQV 374
L+ L +++LS N L G IP G F F F N LCG P +
Sbjct: 686 SNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYP---L 742
Query: 375 PPCKTS-----IHH 383
P C S HH
Sbjct: 743 PRCDPSNADGYAHH 756
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 111/348 (31%), Positives = 149/348 (42%), Gaps = 71/348 (20%)
Query: 57 RLPNLEKLYLWGNNFSGTIP-----------------------RFIFNASKLSKLSLGMN 93
R NLE L + NNFS IP R I ++L L++ N
Sbjct: 195 RCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSN 254
Query: 94 SFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNN------- 146
F G IP L++L+ L L EN T P+ FLS C +LT +DLS N
Sbjct: 255 QFVGPIPPL--PLKSLQYLSLAENKFTGEIPD--FLSGA--CDTLTGLDLSGNHFYGAVP 308
Query: 147 -----------------------PLDGILPKTSISNLSRSLEEFYMYNCNISGGIPEEIS 183
P+D +L + L S EF SG +PE ++
Sbjct: 309 PFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEF-------SGELPESLT 361
Query: 184 NLT-NLVEIDLGGNKLNGSIPITLGKLRK--LQRLNLEDNILEGSIPDDICRLAELYRLE 240
NL+ +L+ +DL N +G I L + K LQ L L++N G IP + +EL L
Sbjct: 362 NLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLH 421
Query: 241 LGSNKLYGSIPACFGNLASLRILSLGSNKLTS-IPLTFWNLKDILQLNFSSNFLTGPLLL 299
L N L G+IP+ G+L+ LR L L N L IP +K + L N LTG +
Sbjct: 422 LSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPS 481
Query: 300 EIGNLKVLIGIDFSMNNFSGVIPREIGEKLSYLEDLNLSFNKLKGEIP 347
+ N L I S N +G IP+ IG +L L L LS N G IP
Sbjct: 482 GLSNCTNLNWISLSNNRLTGEIPKWIG-RLENLAILKLSNNSFSGNIP 528
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 142/299 (47%), Gaps = 19/299 (6%)
Query: 65 YLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTSSTP 124
+L ++ +G++ F +AS L+ L L NS SG + +T +L + L +L S+
Sbjct: 80 FLSNSHINGSVSGFKCSAS-LTSLDLSRNSLSGPV-TTLTSLGSCSGL----KFLNVSSN 133
Query: 125 ELSFLSSLS---NCKSLTLIDLSNNPLDGI-LPKTSISNLSRSLEEFYMYNCNISGGIPE 180
L F +S SL ++DLS N + G + +S+ L+ + ISG +
Sbjct: 134 TLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDV-- 191
Query: 181 EISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLE 240
++S NL +D+ N + IP LG LQ L++ N L G I EL L
Sbjct: 192 DVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLN 250
Query: 241 LGSNKLYGSIPACFGNLASLRILSLGSNKLTS-IPLTFWNLKDILQ-LNFSSNFLTGPLL 298
+ SN+ G IP L SL+ LSL NK T IP D L L+ S N G +
Sbjct: 251 ISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVP 308
Query: 299 LEIGNLKVLIGIDFSMNNFSGVIPREIGEKLSYLEDLNLSFNKLKGEIPRGGSFGNFSA 357
G+ +L + S NNFSG +P + K+ L+ L+LSFN+ GE+P S N SA
Sbjct: 309 PFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPE--SLTNLSA 365
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 109/259 (42%), Gaps = 50/259 (19%)
Query: 60 NLEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYL 119
NL + L N +G IP++I L+ L L NSFSG IP+ G+
Sbjct: 488 NLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGD-------------- 533
Query: 120 TSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEEF-----YMY---- 170
C+SL +DL+ N +G +P + F Y+Y
Sbjct: 534 ---------------CRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKND 578
Query: 171 ----NCNISGGI-------PEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLED 219
C+ +G + E+++ L+ ++ G T + L++
Sbjct: 579 GMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSY 638
Query: 220 NILEGSIPDDICRLAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTS-IPLTFW 278
N+L G IP +I + L+ L LG N + GSIP G+L L IL L SNKL IP
Sbjct: 639 NMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMS 698
Query: 279 NLKDILQLNFSSNFLTGPL 297
L + +++ S+N L+GP+
Sbjct: 699 ALTMLTEIDLSNNNLSGPI 717
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 98/218 (44%), Gaps = 31/218 (14%)
Query: 57 RLPNLEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTF------------- 103
RL NL L L N+FSG IP + + L L L N F+G IP+
Sbjct: 509 RLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIA 568
Query: 104 ----------GNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILP 153
G + G + + +L+ LS+ + C ++++ G
Sbjct: 569 GKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPC------NITSRVYGGHTS 622
Query: 154 KTSISNLSRSLEEFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQ 213
T +N S + YN +SG IP+EI ++ L ++LG N ++GSIP +G LR L
Sbjct: 623 PTFDNNGSMMFLDMS-YNM-LSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLN 680
Query: 214 RLNLEDNILEGSIPDDICRLAELYRLELGSNKLYGSIP 251
L+L N L+G IP + L L ++L +N L G IP
Sbjct: 681 ILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 718
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 43/102 (42%), Gaps = 4/102 (3%)
Query: 58 LPNLEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDEN 117
+P L L L N+ SG+IP + + L+ L L N G IP L L ++ L N
Sbjct: 652 MPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNN 711
Query: 118 YLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISN 159
L+ PE+ + K L L P LP+ SN
Sbjct: 712 NLSGPIPEMGQFETFPPAKFLNNPGLCGYP----LPRCDPSN 749
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/268 (36%), Positives = 145/268 (54%), Gaps = 8/268 (2%)
Query: 61 LEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIP-STFGNLRNLEQLGLDENYL 119
L L L GN+F G +P F + S L L+L N+FSG +P T +R L+ L L N
Sbjct: 296 LTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEF 355
Query: 120 TSSTPELSFLSSLSN-CKSLTLIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCNISGGI 178
+ PE SL+N SL +DLS+N G + N +L+E Y+ N +G I
Sbjct: 356 SGELPE-----SLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKI 410
Query: 179 PEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYR 238
P +SN + LV + L N L+G+IP +LG L KL+ L L N+LEG IP ++ + L
Sbjct: 411 PPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLET 470
Query: 239 LELGSNKLYGSIPACFGNLASLRILSLGSNKLTS-IPLTFWNLKDILQLNFSSNFLTGPL 297
L L N L G IP+ N +L +SL +N+LT IP L+++ L S+N +G +
Sbjct: 471 LILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNI 530
Query: 298 LLEIGNLKVLIGIDFSMNNFSGVIPREI 325
E+G+ + LI +D + N F+G IP +
Sbjct: 531 PAELGDCRSLIWLDLNTNLFNGTIPAAM 558
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 110/366 (30%), Positives = 159/366 (43%), Gaps = 56/366 (15%)
Query: 61 LEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLT 120
L++LYL N F+G IP + N S+L L L N SG IPS+ G+L L L L N L
Sbjct: 396 LQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLE 455
Query: 121 SSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCNISGGIPE 180
P+ L K+L + L N L G +P + +SN + +L + N ++G IP+
Sbjct: 456 GEIPQ-----ELMYVKTLETLILDFNDLTGEIP-SGLSNCT-NLNWISLSNNRLTGEIPK 508
Query: 181 EISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLE 240
I L NL + L N +G+IP LG R L L+L N+ G+IP + + +
Sbjct: 509 WIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAAN 568
Query: 241 LGSNKLY------GSIPACFGNLASLRILSLGSNKLTSIPL-----------------TF 277
+ K Y G C G L + S +L + TF
Sbjct: 569 FIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTF 628
Query: 278 WNLKDILQLNFSSNFLTGPLLLEIGNLKVLIGIDFSMNNFSGVIPREIGE---------- 327
N ++ L+ S N L+G + EIG++ L ++ N+ SG IP E+G+
Sbjct: 629 DNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLS 688
Query: 328 -------------KLSYLEDLNLSFNKLKGEIPRGGSFGNFSAESFEGNELLCGSPNLQV 374
L+ L +++LS N L G IP G F F F N LCG P +
Sbjct: 689 SNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYP---L 745
Query: 375 PPCKTS 380
P C S
Sbjct: 746 PRCDPS 751
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 111/348 (31%), Positives = 149/348 (42%), Gaps = 71/348 (20%)
Query: 57 RLPNLEKLYLWGNNFSGTIP-----------------------RFIFNASKLSKLSLGMN 93
R NLE L + NNFS IP R I ++L L++ N
Sbjct: 198 RCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSN 257
Query: 94 SFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNN------- 146
F G IP L++L+ L L EN T P+ FLS C +LT +DLS N
Sbjct: 258 QFVGPIPPL--PLKSLQYLSLAENKFTGEIPD--FLSGA--CDTLTGLDLSGNHFYGAVP 311
Query: 147 -----------------------PLDGILPKTSISNLSRSLEEFYMYNCNISGGIPEEIS 183
P+D +L + L S EF SG +PE ++
Sbjct: 312 PFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEF-------SGELPESLT 364
Query: 184 NLT-NLVEIDLGGNKLNGSIPITLGKLRK--LQRLNLEDNILEGSIPDDICRLAELYRLE 240
NL+ +L+ +DL N +G I L + K LQ L L++N G IP + +EL L
Sbjct: 365 NLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLH 424
Query: 241 LGSNKLYGSIPACFGNLASLRILSLGSNKLTS-IPLTFWNLKDILQLNFSSNFLTGPLLL 299
L N L G+IP+ G+L+ LR L L N L IP +K + L N LTG +
Sbjct: 425 LSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPS 484
Query: 300 EIGNLKVLIGIDFSMNNFSGVIPREIGEKLSYLEDLNLSFNKLKGEIP 347
+ N L I S N +G IP+ IG +L L L LS N G IP
Sbjct: 485 GLSNCTNLNWISLSNNRLTGEIPKWIG-RLENLAILKLSNNSFSGNIP 531
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 142/299 (47%), Gaps = 19/299 (6%)
Query: 65 YLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTSSTP 124
+L ++ +G++ F +AS L+ L L NS SG + +T +L + L +L S+
Sbjct: 83 FLSNSHINGSVSGFKCSAS-LTSLDLSRNSLSGPV-TTLTSLGSCSGL----KFLNVSSN 136
Query: 125 ELSFLSSLS---NCKSLTLIDLSNNPLDGI-LPKTSISNLSRSLEEFYMYNCNISGGIPE 180
L F +S SL ++DLS N + G + +S+ L+ + ISG +
Sbjct: 137 TLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDV-- 194
Query: 181 EISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLE 240
++S NL +D+ N + IP LG LQ L++ N L G I EL L
Sbjct: 195 DVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLN 253
Query: 241 LGSNKLYGSIPACFGNLASLRILSLGSNKLTS-IPLTFWNLKDILQ-LNFSSNFLTGPLL 298
+ SN+ G IP L SL+ LSL NK T IP D L L+ S N G +
Sbjct: 254 ISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVP 311
Query: 299 LEIGNLKVLIGIDFSMNNFSGVIPREIGEKLSYLEDLNLSFNKLKGEIPRGGSFGNFSA 357
G+ +L + S NNFSG +P + K+ L+ L+LSFN+ GE+P S N SA
Sbjct: 312 PFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPE--SLTNLSA 368
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 109/259 (42%), Gaps = 50/259 (19%)
Query: 60 NLEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYL 119
NL + L N +G IP++I L+ L L NSFSG IP+ G+
Sbjct: 491 NLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGD-------------- 536
Query: 120 TSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEEF-----YMY---- 170
C+SL +DL+ N +G +P + F Y+Y
Sbjct: 537 ---------------CRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKND 581
Query: 171 ----NCNISGGI-------PEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLED 219
C+ +G + E+++ L+ ++ G T + L++
Sbjct: 582 GMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSY 641
Query: 220 NILEGSIPDDICRLAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTS-IPLTFW 278
N+L G IP +I + L+ L LG N + GSIP G+L L IL L SNKL IP
Sbjct: 642 NMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMS 701
Query: 279 NLKDILQLNFSSNFLTGPL 297
L + +++ S+N L+GP+
Sbjct: 702 ALTMLTEIDLSNNNLSGPI 720
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 98/218 (44%), Gaps = 31/218 (14%)
Query: 57 RLPNLEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTF------------- 103
RL NL L L N+FSG IP + + L L L N F+G IP+
Sbjct: 512 RLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIA 571
Query: 104 ----------GNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILP 153
G + G + + +L+ LS+ + C ++++ G
Sbjct: 572 GKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPC------NITSRVYGGHTS 625
Query: 154 KTSISNLSRSLEEFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQ 213
T +N S + YN +SG IP+EI ++ L ++LG N ++GSIP +G LR L
Sbjct: 626 PTFDNNGSMMFLDMS-YNM-LSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLN 683
Query: 214 RLNLEDNILEGSIPDDICRLAELYRLELGSNKLYGSIP 251
L+L N L+G IP + L L ++L +N L G IP
Sbjct: 684 ILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 721
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 43/102 (42%), Gaps = 4/102 (3%)
Query: 58 LPNLEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDEN 117
+P L L L N+ SG+IP + + L+ L L N G IP L L ++ L N
Sbjct: 655 MPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNN 714
Query: 118 YLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISN 159
L+ PE+ + K L L P LP+ SN
Sbjct: 715 NLSGPIPEMGQFETFPPAKFLNNPGLCGYP----LPRCDPSN 752
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 136/251 (54%), Gaps = 11/251 (4%)
Query: 130 SSLSNCKSLTLIDLSN-NPLDGILPKTSISNLSRSLEEFYMYNCNISGGIPEEISNLTNL 188
SSL+N L + + N L G +P +I+ L++ L Y+ + N+SG IP+ +S + L
Sbjct: 70 SSLANLPYLNFLYIGGINNLVGPIPP-AIAKLTQ-LHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 189 VEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELY-RLELGSNKLY 247
V +D N L+G++P ++ L L + + N + G+IPD ++L+ + + N+L
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLT 187
Query: 248 GSIPACFGNLASLRILSLGSNKLT-SIPLTFWNLKDILQLNFSSNFLTGPLLLEIGNLKV 306
G IP F NL +L + L N L + F + K+ +++ + N L L ++G K
Sbjct: 188 GKIPPTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFD-LGKVGLSKN 245
Query: 307 LIGIDFSMNNFSGVIPREIGEKLSYLEDLNLSFNKLKGEIPRGGSFGNFSAESFEGNELL 366
L G+D N G +P+ + +L +L LN+SFN L GEIP+GG+ F ++ N+ L
Sbjct: 246 LNGLDLRNNRIYGTLPQGL-TQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCL 304
Query: 367 CGSPNLQVPPC 377
CGSP +P C
Sbjct: 305 CGSP---LPAC 312
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 110/253 (43%), Gaps = 27/253 (10%)
Query: 26 VPAAIFNVSTLKFXXXXXXXXXXXXXXIANVRLPNLEKLYLWGNNFSGTIPRFIFNASKL 85
+P+++ N+ L F A +L L LY+ N SG IP F+ L
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 86 SKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSN 145
L N+ SG +P + +L NL + D N ++ + P+ S S K T + +S
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPD----SYGSFSKLFTSMTISR 183
Query: 146 NPLDGILPKT------SISNLSRSLEEFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLN 199
N L G +P T + +LSR++ E G + N +I L N
Sbjct: 184 NRLTGKIPPTFANLNLAFVDLSRNMLE---------GDASVLFGSDKNTQKIHLAKN--- 231
Query: 200 GSIPITLGKL---RKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKLYGSIPACFGN 256
S+ LGK+ + L L+L +N + G++P + +L L+ L + N L G IP GN
Sbjct: 232 -SLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GN 289
Query: 257 LASLRILSLGSNK 269
L + + +NK
Sbjct: 290 LQRFDVSAYANNK 302
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 90/188 (47%), Gaps = 25/188 (13%)
Query: 433 RTFSYLELCRATDEFSENNLIGRGGFA------------LFIRAFK---------SFDVE 471
+ FS EL A+D FS N++GRGGF + ++ K F E
Sbjct: 26 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTE 85
Query: 472 CEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYS---SNCILDIFQRLNIM 528
EM+ HRNL+++ C + LV YM +GS+ L S LD +R I
Sbjct: 86 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 145
Query: 529 IDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTL 588
+ A L YLH +IH D+K +N+LLD+ A + DF +AKL+ +D +
Sbjct: 146 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA-VR 204
Query: 589 GTIGYMAP 596
GTIG++AP
Sbjct: 205 GTIGHIAP 212
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 88/188 (46%), Gaps = 25/188 (13%)
Query: 433 RTFSYLELCRATDEFSENNLIGRGGFA------------LFIRAFK---------SFDVE 471
+ FS EL A+D F N++GRGGF + ++ K F E
Sbjct: 18 KRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTE 77
Query: 472 CEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYS---SNCILDIFQRLNIM 528
EM+ HRNL+++ C + LV YM +GS+ L S LD +R I
Sbjct: 78 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 137
Query: 529 IDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTL 588
+ A L YLH +IH D+K +N+LLD+ A + DF +AKL+ +D +
Sbjct: 138 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA-VR 196
Query: 589 GTIGYMAP 596
G IG++AP
Sbjct: 197 GXIGHIAP 204
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 68/121 (56%), Gaps = 6/121 (4%)
Query: 479 RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSN---CILDIFQRLNIMIDVASAL 535
RH +L+ +I C L+ +YM +G+L+++LY S+ + QRL I I A L
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 536 EYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMA 595
YLH + +IH D+K N+LLD+N V ++DF I+K T DQ+ GT+GY+
Sbjct: 153 HYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYID 209
Query: 596 P 596
P
Sbjct: 210 P 210
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 93/199 (46%), Gaps = 40/199 (20%)
Query: 432 WRTFSYLELCRATDEFSEN------NLIGRGGFALFIRAF-------------------- 465
+ +FS+ EL T+ F E N +G GGF + + +
Sbjct: 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTE 71
Query: 466 ---KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI---- 518
+ FD E ++M +H NL++++ S+ + LV YMP+GSL L +C+
Sbjct: 72 ELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL---SCLDGTP 128
Query: 519 -LDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTG 577
L R I A+ + +LH + IH D+K +N+LLD+ A +SDF +A+
Sbjct: 129 PLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEK 185
Query: 578 EDQSMTQTQTLGTIGYMAP 596
Q++ ++ +GT YMAP
Sbjct: 186 FAQTVMXSRIVGTTAYMAP 204
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 40/199 (20%)
Query: 432 WRTFSYLELCRATDEFSEN------NLIGRGGFALFIRAF-------------------- 465
+ +FS+ EL T+ F E N +G GGF + + +
Sbjct: 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTE 71
Query: 466 ---KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI---- 518
+ FD E ++M +H NL++++ S+ + LV YMP+GSL L +C+
Sbjct: 72 ELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL---SCLDGTP 128
Query: 519 -LDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTG 577
L R I A+ + +LH + IH D+K +N+LLD+ A +SDF +A+
Sbjct: 129 PLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEK 185
Query: 578 EDQSMTQTQTLGTIGYMAP 596
Q++ + +GT YMAP
Sbjct: 186 FAQTVMXXRIVGTTAYMAP 204
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 91/199 (45%), Gaps = 40/199 (20%)
Query: 432 WRTFSYLELCRATDEFSEN------NLIGRGGFALFIRAF-------------------- 465
+ +FS+ EL T+ F E N +G GGF + + +
Sbjct: 6 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTE 65
Query: 466 ---KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI---- 518
+ FD E ++M +H NL++++ S+ + LV YMP+GSL L +C+
Sbjct: 66 ELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL---SCLDGTP 122
Query: 519 -LDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTG 577
L R I A+ + +LH + IH D+K +N+LLD+ A +SDF +A+
Sbjct: 123 PLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEK 179
Query: 578 EDQSMTQTQTLGTIGYMAP 596
Q + + +GT YMAP
Sbjct: 180 FAQXVMXXRIVGTTAYMAP 198
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 83/182 (45%), Gaps = 26/182 (14%)
Query: 438 LELCRATDEFSENNLIGRGGFALFIRAFKSFDVECEMMKSI------------------- 478
++L AT+ F LIG G F + + + +
Sbjct: 32 VDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSF 91
Query: 479 -RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSN---CILDIFQRLNIMIDVASA 534
RH +L+ +I C L+ +YM +G+L+++LY S+ + QRL I I A
Sbjct: 92 CRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARG 151
Query: 535 LEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYM 594
L YLH + +IH D+K N+LLD+N V ++DF I+K T Q+ GT+GY+
Sbjct: 152 LHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYI 208
Query: 595 AP 596
P
Sbjct: 209 DP 210
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 88/199 (44%), Gaps = 40/199 (20%)
Query: 432 WRTFSYLELCRATDEFSEN------NLIGRGGFALFIRAF-------------------- 465
+ +FS+ EL T+ F E N G GGF + + +
Sbjct: 3 FHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTE 62
Query: 466 ---KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI---- 518
+ FD E ++ +H NL++++ S+ + LV Y P+GSL L +C+
Sbjct: 63 ELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRL---SCLDGTP 119
Query: 519 -LDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTG 577
L R I A+ + +LH + IH D+K +N+LLD+ A +SDF +A+
Sbjct: 120 PLSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEK 176
Query: 578 EDQSMTQTQTLGTIGYMAP 596
Q + ++ +GT Y AP
Sbjct: 177 FAQXVXXSRIVGTTAYXAP 195
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 69/136 (50%), Gaps = 6/136 (4%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 522
R + F E +M H N+I++ + +V EYM +GSL+ +L + + I
Sbjct: 92 RQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIM 151
Query: 523 QRLNIMIDVASALEYL-HFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE-DQ 580
Q + ++ V + + YL GY +H DL NVL+D N+V +SDF ++++L + D
Sbjct: 152 QLVGMLRGVGAGMRYLSDLGY----VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDA 207
Query: 581 SMTQTQTLGTIGYMAP 596
+ T T I + AP
Sbjct: 208 AXTTTGGKIPIRWTAP 223
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 69/136 (50%), Gaps = 6/136 (4%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 522
R + F E +M H N+I++ + +V EYM +GSL+ +L + + I
Sbjct: 92 RQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIM 151
Query: 523 QRLNIMIDVASALEYL-HFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE-DQ 580
Q + ++ V + + YL GY +H DL NVL+D N+V +SDF ++++L + D
Sbjct: 152 QLVGMLRGVGAGMRYLSDLGY----VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDA 207
Query: 581 SMTQTQTLGTIGYMAP 596
+ T T I + AP
Sbjct: 208 AYTTTGGKIPIRWTAP 223
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 4/126 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++M + H +K+ + ++E L Y +G L KY+ + R +
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAE 140
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ SALEYLH +IH DLKP N+LL+++M ++DF AK+L+ E + +GT
Sbjct: 141 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 591 IGYMAP 596
Y++P
Sbjct: 198 AQYVSP 203
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 4/126 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++M + H +K+ + ++E L Y +G L KY+ + R +
Sbjct: 85 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAE 143
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ SALEYLH +IH DLKP N+LL+++M ++DF AK+L+ E + +GT
Sbjct: 144 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 200
Query: 591 IGYMAP 596
Y++P
Sbjct: 201 AQYVSP 206
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 4/126 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++M + H +K+ + ++E L Y +G L KY+ + R +
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAE 140
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ SALEYLH +IH DLKP N+LL+++M ++DF AK+L+ E + +GT
Sbjct: 141 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 591 IGYMAP 596
Y++P
Sbjct: 198 AQYVSP 203
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 4/126 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++M + H +K+ + ++E L Y +G L KY+ + R +
Sbjct: 83 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAE 141
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ SALEYLH +IH DLKP N+LL+++M ++DF AK+L+ E + +GT
Sbjct: 142 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 198
Query: 591 IGYMAP 596
Y++P
Sbjct: 199 AQYVSP 204
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 4/126 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++M + H +K+ + ++E L Y +G L KY+ + R +
Sbjct: 60 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAE 118
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ SALEYLH +IH DLKP N+LL+++M ++DF AK+L+ E + +GT
Sbjct: 119 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 175
Query: 591 IGYMAP 596
Y++P
Sbjct: 176 AQYVSP 181
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 4/126 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++M + H +K+ + ++E L Y +G L KY+ + R +
Sbjct: 83 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAE 141
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ SALEYLH +IH DLKP N+LL+++M ++DF AK+L+ E + +GT
Sbjct: 142 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 198
Query: 591 IGYMAP 596
Y++P
Sbjct: 199 AQYVSP 204
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 4/126 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++M + H +K+ + ++E L Y +G L KY+ + R +
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAE 140
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ SALEYLH +IH DLKP N+LL+++M ++DF AK+L+ E + +GT
Sbjct: 141 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 591 IGYMAP 596
Y++P
Sbjct: 198 AQYVSP 203
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 4/126 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++M + H +K+ + ++E L Y +G L KY+ + R +
Sbjct: 59 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAE 117
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ SALEYLH +IH DLKP N+LL+++M ++DF AK+L+ E + +GT
Sbjct: 118 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 174
Query: 591 IGYMAP 596
Y++P
Sbjct: 175 AQYVSP 180
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 4/126 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++M + H +K+ + ++E L Y +G L KY+ + R +
Sbjct: 58 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAE 116
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ SALEYLH +IH DLKP N+LL+++M ++DF AK+L+ E + +GT
Sbjct: 117 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 173
Query: 591 IGYMAP 596
Y++P
Sbjct: 174 AQYVSP 179
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 4/126 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++M + H +K+ + ++E L Y +G L KY+ + R +
Sbjct: 57 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAE 115
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ SALEYLH +IH DLKP N+LL+++M ++DF AK+L+ E + +GT
Sbjct: 116 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 172
Query: 591 IGYMAP 596
Y++P
Sbjct: 173 AQYVSP 178
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 63/131 (48%), Gaps = 4/131 (3%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+ F E E+M + H L+++ C + LV E+M HG L YL + + L
Sbjct: 50 EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLL 109
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 585
+ +DV + YL A VIH DL N L+ +N V +SDF + + + +DQ + T
Sbjct: 110 GMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVL-DDQYTSST 165
Query: 586 QTLGTIGYMAP 596
T + + +P
Sbjct: 166 GTKFPVKWASP 176
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 4/126 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++M + H +K+ + ++E L Y +G L KY+ + R +
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAE 140
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ SALEYLH +IH DLKP N+LL+++M ++DF AK+L+ E + +GT
Sbjct: 141 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 591 IGYMAP 596
Y++P
Sbjct: 198 AQYVSP 203
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 4/126 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++M + H +K+ + ++E L Y +G L KY+ + R +
Sbjct: 80 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAE 138
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ SALEYLH +IH DLKP N+LL+++M ++DF AK+L+ E + +GT
Sbjct: 139 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 591 IGYMAP 596
Y++P
Sbjct: 196 AQYVSP 201
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 4/126 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++M + H +K+ + ++E L Y +G L KY+ + R +
Sbjct: 80 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAE 138
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ SALEYLH +IH DLKP N+LL+++M ++DF AK+L+ E + +GT
Sbjct: 139 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGT 195
Query: 591 IGYMAP 596
Y++P
Sbjct: 196 AQYVSP 201
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 4/126 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++M + H +K+ + ++E L Y +G L KY+ + R +
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAE 140
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ SALEYLH +IH DLKP N+LL+++M ++DF AK+L+ E + +GT
Sbjct: 141 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 591 IGYMAP 596
Y++P
Sbjct: 198 AQYVSP 203
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 4/126 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++M + H +K+ + ++E L Y +G L KY+ + R +
Sbjct: 80 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAE 138
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ SALEYLH +IH DLKP N+LL+++M ++DF AK+L+ E + +GT
Sbjct: 139 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 591 IGYMAP 596
Y++P
Sbjct: 196 AQYVSP 201
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 66/128 (51%), Gaps = 5/128 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNC--ILDIFQRLNIM 528
E +MK +RH N++ + + + ++V EY+ GSL + L+ S LD +RL++
Sbjct: 84 EVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMA 143
Query: 529 IDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTL 588
DVA + YLH + ++H DLK N+L+D + DF +++L +
Sbjct: 144 YDVAKGMNYLH-NRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKAS--XFLXSKXAA 200
Query: 589 GTIGYMAP 596
GT +MAP
Sbjct: 201 GTPEWMAP 208
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 4/126 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++M + H +K+ + ++E L Y +G L KY+ + R +
Sbjct: 80 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAE 138
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ SALEYLH +IH DLKP N+LL+++M ++DF AK+L+ E + +GT
Sbjct: 139 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 591 IGYMAP 596
Y++P
Sbjct: 196 AQYVSP 201
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 4/126 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++M + H +K+ + ++E L Y +G L KY+ + R +
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRF-YTAE 140
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ SALEYLH +IH DLKP N+LL+++M ++DF AK+L+ E + +GT
Sbjct: 141 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 197
Query: 591 IGYMAP 596
Y++P
Sbjct: 198 AQYVSP 203
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 63/131 (48%), Gaps = 4/131 (3%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+ F E E+M + H L+++ C + LV E+M HG L YL + + L
Sbjct: 47 EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLL 106
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 585
+ +DV + YL A VIH DL N L+ +N V +SDF + + + +DQ + T
Sbjct: 107 GMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVL-DDQYTSST 162
Query: 586 QTLGTIGYMAP 596
T + + +P
Sbjct: 163 GTKFPVKWASP 173
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 4/126 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++M + H +K+ + ++E L Y +G L KY+ + R +
Sbjct: 79 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAE 137
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ SALEYLH +IH DLKP N+LL+++M ++DF AK+L+ E + +GT
Sbjct: 138 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 194
Query: 591 IGYMAP 596
Y++P
Sbjct: 195 AQYVSP 200
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 4/126 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++M + H +K+ + ++E L Y +G L KY+ + R +
Sbjct: 64 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAE 122
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ SALEYLH +IH DLKP N+LL+++M ++DF AK+L+ E + +GT
Sbjct: 123 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 179
Query: 591 IGYMAP 596
Y++P
Sbjct: 180 AQYVSP 185
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 4/126 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++M + H +K+ + ++E L Y +G L KY+ + R +
Sbjct: 79 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAE 137
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ SALEYLH +IH DLKP N+LL+++M ++DF AK+L+ E + +GT
Sbjct: 138 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 194
Query: 591 IGYMAP 596
Y++P
Sbjct: 195 AQYVSP 200
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 63/131 (48%), Gaps = 4/131 (3%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+ F E E+M + H L+++ C + LV E+M HG L YL + + L
Sbjct: 45 EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLL 104
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 585
+ +DV + YL A VIH DL N L+ +N V +SDF + + + +DQ + T
Sbjct: 105 GMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVL-DDQYTSST 160
Query: 586 QTLGTIGYMAP 596
T + + +P
Sbjct: 161 GTKFPVKWASP 171
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 62/129 (48%), Gaps = 4/129 (3%)
Query: 468 FDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNI 527
F E E+M + H L+++ C + LV E+M HG L YL + + L +
Sbjct: 69 FIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGM 128
Query: 528 MIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQT 587
+DV + YL A VIH DL N L+ +N V +SDF + + + +DQ + T T
Sbjct: 129 CLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGT 184
Query: 588 LGTIGYMAP 596
+ + +P
Sbjct: 185 KFPVKWASP 193
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 64/114 (56%), Gaps = 4/114 (3%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNC-ILDIFQR 524
+ F E +MK I+H NL++++ C+ E +V EYMP+G+L YL N +
Sbjct: 73 EEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVL 132
Query: 525 LNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE 578
L + ++SA+EYL IH DL N L+ +N V ++DF +++L+TG+
Sbjct: 133 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGD 183
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 63/131 (48%), Gaps = 4/131 (3%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+ F E E+M + H L+++ C + LV E+M HG L YL + + L
Sbjct: 48 EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLL 107
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 585
+ +DV + YL A VIH DL N L+ +N V +SDF + + + +DQ + T
Sbjct: 108 GMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVL-DDQYTSST 163
Query: 586 QTLGTIGYMAP 596
T + + +P
Sbjct: 164 GTKFPVKWASP 174
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 63/131 (48%), Gaps = 4/131 (3%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+ F E E+M + H L+++ C + LV E+M HG L YL + + L
Sbjct: 47 EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLL 106
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 585
+ +DV + YL A VIH DL N L+ +N V +SDF + + + +DQ + T
Sbjct: 107 GMCLDVCEGMAYLE---EASVIHRDLAARNCLVGENQVIKVSDFGMTRFVL-DDQYTSST 162
Query: 586 QTLGTIGYMAP 596
T + + +P
Sbjct: 163 GTKFPVKWASP 173
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 64/126 (50%), Gaps = 4/126 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++M + H +K+ ++E L Y +G L KY+ + R +
Sbjct: 87 ERDVMSRLDHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAE 145
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ SALEYLH +IH DLKP N+LL+++M ++DF AK+L+ E + +GT
Sbjct: 146 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 202
Query: 591 IGYMAP 596
Y++P
Sbjct: 203 AQYVSP 208
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 68/132 (51%), Gaps = 4/132 (3%)
Query: 465 FKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQR 524
F++F E +++ RH N++ + + + A+V ++ SL K+L+ +FQ
Sbjct: 76 FQAFRNEVAVLRKTRHVNILLFMGYMTKDNL-AIVTQWCEGSSLYKHLHVQETKFQMFQL 134
Query: 525 LNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 584
++I A ++YLH + +IH D+K +N+ L + + + DF +A + + S
Sbjct: 135 IDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQV 191
Query: 585 TQTLGTIGYMAP 596
Q G++ +MAP
Sbjct: 192 EQPTGSVLWMAP 203
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 67/128 (52%), Gaps = 5/128 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNC--ILDIFQRLNIM 528
E +MK +RH N++ + + + ++V EY+ GSL + L+ S LD +RL++
Sbjct: 84 EVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMA 143
Query: 529 IDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTL 588
DVA + YLH + ++H +LK N+L+D + DF +++L ++
Sbjct: 144 YDVAKGMNYLH-NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAS--TFLSSKSAA 200
Query: 589 GTIGYMAP 596
GT +MAP
Sbjct: 201 GTPEWMAP 208
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 74/145 (51%), Gaps = 13/145 (8%)
Query: 459 ALFI------RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL 512
A+FI K F+ E + H+N++ +I ++ LV+EY+ +L +Y+
Sbjct: 43 AIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYI 102
Query: 513 YSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIA 572
S+ L + +N + +++ H ++H D+KP N+L+D N + DF IA
Sbjct: 103 -ESHGPLSVDTAINFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIA 158
Query: 573 KLLTGEDQSMTQT-QTLGTIGYMAP 596
K L+ + S+TQT LGT+ Y +P
Sbjct: 159 KALS--ETSLTQTNHVLGTVQYFSP 181
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 66/122 (54%), Gaps = 5/122 (4%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+ F E +M H N+I++ + + +V EYM +GSL+ +L + + Q +
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV 150
Query: 526 NIMIDVASALEYL-HFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 584
++ +AS ++YL GY +H DL N+L++ N+V +SDF +A++L + ++
Sbjct: 151 GMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYT 206
Query: 585 TQ 586
T+
Sbjct: 207 TR 208
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 69/136 (50%), Gaps = 8/136 (5%)
Query: 465 FKSFDVECEMMKSIRHRNLIKVISSCSNEEFK--ALVLEYMPHGSLEKYLYSSNCILDIF 522
+ F+ E E++KS++H N++K C + + L++EY+P+GSL YL +D
Sbjct: 73 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 132
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582
+ L + +EYL + IH DL N+L+++ + DF + K+L +D+
Sbjct: 133 KLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEX 188
Query: 583 TQTQTLGT--IGYMAP 596
+ + G I + AP
Sbjct: 189 XKVKEPGESPIFWYAP 204
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 69/136 (50%), Gaps = 8/136 (5%)
Query: 465 FKSFDVECEMMKSIRHRNLIKVISSCSNEEFK--ALVLEYMPHGSLEKYLYSSNCILDIF 522
+ F+ E E++KS++H N++K C + + L++EY+P+GSL YL +D
Sbjct: 55 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 114
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582
+ L + +EYL + IH DL N+L+++ + DF + K+L +D+
Sbjct: 115 KLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEX 170
Query: 583 TQTQTLGT--IGYMAP 596
+ + G I + AP
Sbjct: 171 XKVKEPGESPIFWYAP 186
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 69/136 (50%), Gaps = 8/136 (5%)
Query: 465 FKSFDVECEMMKSIRHRNLIKVISSCSNEEFK--ALVLEYMPHGSLEKYLYSSNCILDIF 522
+ F+ E E++KS++H N++K C + + L++EY+P+GSL YL +D
Sbjct: 62 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 121
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582
+ L + +EYL + IH DL N+L+++ + DF + K+L +D+
Sbjct: 122 KLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEX 177
Query: 583 TQTQTLGT--IGYMAP 596
+ + G I + AP
Sbjct: 178 XKVKEPGESPIFWYAP 193
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 69/136 (50%), Gaps = 8/136 (5%)
Query: 465 FKSFDVECEMMKSIRHRNLIKVISSCSNEEFK--ALVLEYMPHGSLEKYLYSSNCILDIF 522
+ F+ E E++KS++H N++K C + + L++EY+P+GSL YL +D
Sbjct: 58 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 117
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582
+ L + +EYL + IH DL N+L+++ + DF + K+L +D+
Sbjct: 118 KLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEX 173
Query: 583 TQTQTLGT--IGYMAP 596
+ + G I + AP
Sbjct: 174 XKVKEPGESPIFWYAP 189
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 69/136 (50%), Gaps = 8/136 (5%)
Query: 465 FKSFDVECEMMKSIRHRNLIKVISSCSNEEFK--ALVLEYMPHGSLEKYLYSSNCILDIF 522
+ F+ E E++KS++H N++K C + + L++EY+P+GSL YL +D
Sbjct: 61 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 120
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582
+ L + +EYL + IH DL N+L+++ + DF + K+L +D+
Sbjct: 121 KLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEX 176
Query: 583 TQTQTLGT--IGYMAP 596
+ + G I + AP
Sbjct: 177 XKVKEPGESPIFWYAP 192
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 69/136 (50%), Gaps = 8/136 (5%)
Query: 465 FKSFDVECEMMKSIRHRNLIKVISSCSNEEFK--ALVLEYMPHGSLEKYLYSSNCILDIF 522
+ F+ E E++KS++H N++K C + + L++EY+P+GSL YL +D
Sbjct: 73 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 132
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582
+ L + +EYL + IH DL N+L+++ + DF + K+L +D+
Sbjct: 133 KLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEX 188
Query: 583 TQTQTLGT--IGYMAP 596
+ + G I + AP
Sbjct: 189 XKVKEPGESPIFWYAP 204
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 69/135 (51%), Gaps = 8/135 (5%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFK--ALVLEYMPHGSLEKYLYSSNCILDIFQ 523
+ F+ E E++KS++H N++K C + + L++EY+P+GSL YL +D +
Sbjct: 61 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIK 120
Query: 524 RLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMT 583
L + +EYL + IH DL N+L+++ + DF + K+L +D+
Sbjct: 121 LLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXX 176
Query: 584 QTQTLGT--IGYMAP 596
+ + G I + AP
Sbjct: 177 KVKEPGESPIFWYAP 191
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 69/135 (51%), Gaps = 8/135 (5%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFK--ALVLEYMPHGSLEKYLYSSNCILDIFQ 523
+ F+ E E++KS++H N++K C + + L++EY+P+GSL YL +D +
Sbjct: 87 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIK 146
Query: 524 RLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMT 583
L + +EYL + IH DL N+L+++ + DF + K+L +D+
Sbjct: 147 LLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXX 202
Query: 584 QTQTLGT--IGYMAP 596
+ + G I + AP
Sbjct: 203 KVKEPGESPIFWYAP 217
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 69/136 (50%), Gaps = 8/136 (5%)
Query: 465 FKSFDVECEMMKSIRHRNLIKVISSCSNEEFK--ALVLEYMPHGSLEKYLYSSNCILDIF 522
+ F+ E E++KS++H N++K C + + L++EY+P+GSL YL +D
Sbjct: 53 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 112
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582
+ L + +EYL + IH DL N+L+++ + DF + K+L +D+
Sbjct: 113 KLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEX 168
Query: 583 TQTQTLGT--IGYMAP 596
+ + G I + AP
Sbjct: 169 XKVKEPGESPIFWYAP 184
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 69/136 (50%), Gaps = 8/136 (5%)
Query: 465 FKSFDVECEMMKSIRHRNLIKVISSCSNEEFK--ALVLEYMPHGSLEKYLYSSNCILDIF 522
+ F+ E E++KS++H N++K C + + L++EY+P+GSL YL +D
Sbjct: 54 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 113
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582
+ L + +EYL + IH DL N+L+++ + DF + K+L +D+
Sbjct: 114 KLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEX 169
Query: 583 TQTQTLGT--IGYMAP 596
+ + G I + AP
Sbjct: 170 XKVKEPGESPIFWYAP 185
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 72/133 (54%), Gaps = 8/133 (6%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLY-SSNCILDIFQR 524
++F E ++MK +RH L+++ + S E +V EYM GSL +L + L + Q
Sbjct: 307 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQL 365
Query: 525 LNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 584
+++ +AS + Y+ +H DL+ +N+L+ +N+V ++DF +A+L+ ED T
Sbjct: 366 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTA 420
Query: 585 TQTLG-TIGYMAP 596
Q I + AP
Sbjct: 421 RQGAKFPIKWTAP 433
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 69/136 (50%), Gaps = 8/136 (5%)
Query: 465 FKSFDVECEMMKSIRHRNLIKVISSCSNEEFK--ALVLEYMPHGSLEKYLYSSNCILDIF 522
+ F+ E E++KS++H N++K C + + L++EY+P+GSL YL +D
Sbjct: 59 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 118
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582
+ L + +EYL + IH DL N+L+++ + DF + K+L +D+
Sbjct: 119 KLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEX 174
Query: 583 TQTQTLGT--IGYMAP 596
+ + G I + AP
Sbjct: 175 XKVKEPGESPIFWYAP 190
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 69/136 (50%), Gaps = 8/136 (5%)
Query: 465 FKSFDVECEMMKSIRHRNLIKVISSCSNEEFK--ALVLEYMPHGSLEKYLYSSNCILDIF 522
+ F+ E E++KS++H N++K C + + L++EY+P+GSL YL +D
Sbjct: 55 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 114
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582
+ L + +EYL + IH DL N+L+++ + DF + K+L +D+
Sbjct: 115 KLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEX 170
Query: 583 TQTQTLGT--IGYMAP 596
+ + G I + AP
Sbjct: 171 XKVKEPGESPIFWYAP 186
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 70/135 (51%), Gaps = 8/135 (5%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFK--ALVLEYMPHGSLEKYLYSSNCILDIFQ 523
+ F+ E E++KS++H N++K C + + L++EY+P+GSL YL + +D +
Sbjct: 59 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIK 118
Query: 524 RLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMT 583
L + +EYL + IH DL N+L+++ + DF + K+L +D+
Sbjct: 119 LLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXX 174
Query: 584 QTQTLGT--IGYMAP 596
+ + G I + AP
Sbjct: 175 KVKEPGESPIFWYAP 189
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 69/135 (51%), Gaps = 8/135 (5%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFK--ALVLEYMPHGSLEKYLYSSNCILDIFQ 523
+ F+ E E++KS++H N++K C + + L++EY+P+GSL YL +D +
Sbjct: 56 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIK 115
Query: 524 RLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMT 583
L + +EYL + IH DL N+L+++ + DF + K+L +D+
Sbjct: 116 LLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEFF 171
Query: 584 QTQTLGT--IGYMAP 596
+ + G I + AP
Sbjct: 172 KVKEPGESPIFWYAP 186
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 72/133 (54%), Gaps = 8/133 (6%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLY-SSNCILDIFQR 524
++F E ++MK +RH L+++ + S E +V EYM GSL +L + L + Q
Sbjct: 48 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-XIVTEYMSKGSLLDFLKGETGKYLRLPQL 106
Query: 525 LNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 584
+++ +AS + Y+ +H DL+ +N+L+ +N+V ++DF +A+L+ ED T
Sbjct: 107 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEXTA 161
Query: 585 TQTLG-TIGYMAP 596
Q I + AP
Sbjct: 162 RQGAKFPIKWTAP 174
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 70/137 (51%), Gaps = 15/137 (10%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+ F E +MK I+H NL++++ C+ E +++E+M +G+L YL N Q +
Sbjct: 55 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECN-----RQEV 109
Query: 526 NIMI------DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 579
N ++ ++SA+EYL IH DL N L+ +N + ++DF +++L+TG D
Sbjct: 110 NAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-D 165
Query: 580 QSMTQTQTLGTIGYMAP 596
I + AP
Sbjct: 166 TXTAHAGAKFPIKWTAP 182
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 66/122 (54%), Gaps = 5/122 (4%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+ F E +M H N+I++ + + +V EYM +GSL+ +L + + Q +
Sbjct: 79 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV 138
Query: 526 NIMIDVASALEYL-HFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 584
++ +AS ++YL GY +H DL N+L++ N+V +SDF ++++L + ++
Sbjct: 139 GMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 194
Query: 585 TQ 586
T+
Sbjct: 195 TR 196
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 71/133 (53%), Gaps = 8/133 (6%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSS-NCILDIFQR 524
++F E ++MK IRH L+++ + S E +V EYM GSL +L L + Q
Sbjct: 58 EAFLQEAQVMKKIRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQL 116
Query: 525 LNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 584
+++ +AS + Y+ +H DL+ +N+L+ +N+V ++DF +A+L+ ED T
Sbjct: 117 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTA 171
Query: 585 TQTLG-TIGYMAP 596
Q I + AP
Sbjct: 172 RQGAKFPIKWTAP 184
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 72/133 (54%), Gaps = 8/133 (6%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSS-NCILDIFQR 524
++F E ++MK +RH L+++ + S E +V+EYM GSL +L L + Q
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVIEYMSKGSLLDFLKGEMGKYLRLPQL 116
Query: 525 LNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 584
+++ +AS + Y+ +H DL+ +N+L+ +N+V ++DF +A+L+ ED T
Sbjct: 117 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEXTA 171
Query: 585 TQTLG-TIGYMAP 596
Q I + AP
Sbjct: 172 RQGAKFPIKWTAP 184
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 74/146 (50%), Gaps = 10/146 (6%)
Query: 455 RGGFALFIRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYS 514
+GG+ R + F E +M H N+I++ +N ++ E+M +G+L+ +L
Sbjct: 53 KGGYTE--RQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRL 110
Query: 515 SNCILDIFQRLNIMIDVASALEYL-HFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAK 573
++ + Q + ++ +AS + YL Y +H DL N+L++ N+V +SDF +++
Sbjct: 111 NDGQFTVIQLVGMLRGIASGMRYLAEMSY----VHRDLAARNILVNSNLVCKVSDFGLSR 166
Query: 574 LLTGEDQSMTQTQTLG---TIGYMAP 596
L T+T +LG I + AP
Sbjct: 167 FLEENSSDPTETSSLGGKIPIRWTAP 192
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 72/133 (54%), Gaps = 8/133 (6%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSS-NCILDIFQR 524
++F E ++MK +RH L+++ + S E +V+EYM GSL +L L + Q
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVIEYMSKGSLLDFLKGEMGKYLRLPQL 116
Query: 525 LNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 584
+++ +AS + Y+ +H DL+ +N+L+ +N+V ++DF +A+L+ ED T
Sbjct: 117 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTA 171
Query: 585 TQTLG-TIGYMAP 596
Q I + AP
Sbjct: 172 RQGAKFPIKWTAP 184
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 66/122 (54%), Gaps = 5/122 (4%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+ F E +M H N+I++ + + +V EYM +GSL+ +L + + Q +
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV 150
Query: 526 NIMIDVASALEYL-HFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 584
++ +AS ++YL GY +H DL N+L++ N+V +SDF ++++L + ++
Sbjct: 151 GMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 585 TQ 586
T+
Sbjct: 207 TR 208
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 66/122 (54%), Gaps = 5/122 (4%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+ F E +M H N+I++ + + +V EYM +GSL+ +L + + Q +
Sbjct: 62 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV 121
Query: 526 NIMIDVASALEYL-HFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 584
++ +AS ++YL GY +H DL N+L++ N+V +SDF ++++L + ++
Sbjct: 122 GMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 177
Query: 585 TQ 586
T+
Sbjct: 178 TR 179
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 72/133 (54%), Gaps = 8/133 (6%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLY-SSNCILDIFQR 524
++F E ++MK +RH L+++ + S E +V EYM GSL +L + L + Q
Sbjct: 224 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQL 282
Query: 525 LNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 584
+++ +AS + Y+ +H DL+ +N+L+ +N+V ++DF +A+L+ ED T
Sbjct: 283 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTA 337
Query: 585 TQTLG-TIGYMAP 596
Q I + AP
Sbjct: 338 RQGAKFPIKWTAP 350
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 72/133 (54%), Gaps = 8/133 (6%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLY-SSNCILDIFQR 524
++F E ++MK +RH L+++ + S E +V EYM GSL +L + L + Q
Sbjct: 224 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQL 282
Query: 525 LNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 584
+++ +AS + Y+ +H DL+ +N+L+ +N+V ++DF +A+L+ ED T
Sbjct: 283 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTA 337
Query: 585 TQTLG-TIGYMAP 596
Q I + AP
Sbjct: 338 RQGAKFPIKWTAP 350
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+ F E +M H N+I++ + + +V EYM +GSL+ +L + + Q +
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV 150
Query: 526 NIMIDVASALEYL-HFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 584
++ +AS ++YL GY +H DL N+L++ N+V +SDF + ++L + ++
Sbjct: 151 GMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYT 206
Query: 585 TQ 586
T+
Sbjct: 207 TR 208
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 66/122 (54%), Gaps = 5/122 (4%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+ F E +M H N+I++ + + +V EYM +GSL+ +L + + Q +
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV 150
Query: 526 NIMIDVASALEYL-HFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 584
++ +AS ++YL GY +H DL N+L++ N+V +SDF ++++L + ++
Sbjct: 151 GMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 585 TQ 586
T+
Sbjct: 207 TR 208
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 66/122 (54%), Gaps = 5/122 (4%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+ F E +M H N+I++ + + +V EYM +GSL+ +L + + Q +
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV 150
Query: 526 NIMIDVASALEYL-HFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 584
++ +AS ++YL GY +H DL N+L++ N+V +SDF ++++L + ++
Sbjct: 151 GMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 585 TQ 586
T+
Sbjct: 207 TR 208
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 66/122 (54%), Gaps = 5/122 (4%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+ F E +M H N+I++ + + +V EYM +GSL+ +L + + Q +
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV 150
Query: 526 NIMIDVASALEYL-HFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 584
++ +AS ++YL GY +H DL N+L++ N+V +SDF ++++L + ++
Sbjct: 151 GMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 585 TQ 586
T+
Sbjct: 207 TR 208
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 70/135 (51%), Gaps = 8/135 (5%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFK--ALVLEYMPHGSLEKYLYSSNCILDIFQ 523
+ F+ E E++KS++H N++K C + + L++E++P+GSL +YL +D +
Sbjct: 59 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIK 118
Query: 524 RLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMT 583
L + +EYL + IH DL N+L+++ + DF + K+L +D+
Sbjct: 119 LLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXX 174
Query: 584 QTQTLGT--IGYMAP 596
+ + G I + AP
Sbjct: 175 KVKEPGESPIFWYAP 189
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 72/133 (54%), Gaps = 8/133 (6%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLY-SSNCILDIFQR 524
++F E ++MK +RH L+++ + S E +V EYM GSL +L + L + Q
Sbjct: 51 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQL 109
Query: 525 LNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 584
+++ +AS + Y+ +H DL+ +N+L+ +N+V ++DF +A+L+ ED T
Sbjct: 110 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTA 164
Query: 585 TQTLG-TIGYMAP 596
Q I + AP
Sbjct: 165 RQGAKFPIKWTAP 177
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 66/122 (54%), Gaps = 5/122 (4%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+ F E +M H N+I++ + + +V EYM +GSL+ +L + + Q +
Sbjct: 89 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV 148
Query: 526 NIMIDVASALEYL-HFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 584
++ +AS ++YL GY +H DL N+L++ N+V +SDF ++++L + ++
Sbjct: 149 GMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 204
Query: 585 TQ 586
T+
Sbjct: 205 TR 206
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 73/140 (52%), Gaps = 21/140 (15%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+ F E +MK I+H NL++++ C+ E +++E+M +G+L YL N Q +
Sbjct: 59 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECN-----RQEV 113
Query: 526 NIMI------DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 579
N ++ ++SA+EYL IH DL N L+ +N + ++DF +++L+TG+
Sbjct: 114 NAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD- 169
Query: 580 QSMTQTQTLGT---IGYMAP 596
T T G I + AP
Sbjct: 170 ---TYTAHAGAKFPIKWTAP 186
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 68/132 (51%), Gaps = 5/132 (3%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSN-CILDIFQR 524
+ F E +MK I+H NL++++ C+ E +++E+M +G+L YL N +
Sbjct: 52 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL 111
Query: 525 LNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 584
L + ++SA+EYL IH DL N L+ +N + ++DF +++L+TG D
Sbjct: 112 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTXTAH 167
Query: 585 TQTLGTIGYMAP 596
I + AP
Sbjct: 168 AGAKFPIKWTAP 179
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 71/135 (52%), Gaps = 11/135 (8%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-LDIFQR 524
+ F E +MK I+H NL++++ C+ E +++E+M +G+L YL N +
Sbjct: 54 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL 113
Query: 525 LNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 584
L + ++SA+EYL IH DL N L+ +N + ++DF +++L+TG+ T
Sbjct: 114 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD----TY 166
Query: 585 TQTLGT---IGYMAP 596
T G I + AP
Sbjct: 167 TAHAGAKFPIKWTAP 181
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 72/133 (54%), Gaps = 8/133 (6%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLY-SSNCILDIFQR 524
++F E ++MK +RH L+++ + S E +V EYM GSL +L + L + Q
Sbjct: 55 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMNKGSLLDFLKGETGKYLRLPQL 113
Query: 525 LNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 584
+++ +AS + Y+ +H DL+ +N+L+ +N+V ++DF +A+L+ ED T
Sbjct: 114 VDMSAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEWTA 168
Query: 585 TQTLG-TIGYMAP 596
Q I + AP
Sbjct: 169 RQGAKFPIKWTAP 181
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 69/137 (50%), Gaps = 15/137 (10%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+ F E +MK I+H NL++++ C+ E ++ E+M +G+L YL N Q +
Sbjct: 59 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN-----RQEV 113
Query: 526 NIMI------DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 579
N ++ ++SA+EYL IH DL N L+ +N + ++DF +++L+TG D
Sbjct: 114 NAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-D 169
Query: 580 QSMTQTQTLGTIGYMAP 596
I + AP
Sbjct: 170 TXTAHAGAKFPIKWTAP 186
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 71/133 (53%), Gaps = 8/133 (6%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSS-NCILDIFQR 524
++F E ++MK +RH L+++ + S E +V EYM GSL +L L + Q
Sbjct: 47 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQL 105
Query: 525 LNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 584
+++ +AS + Y+ +H DL+ +N+L+ +N+V ++DF +A+L+ ED T
Sbjct: 106 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTA 160
Query: 585 TQTLG-TIGYMAP 596
Q I + AP
Sbjct: 161 RQGAKFPIKWTAP 173
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 71/135 (52%), Gaps = 11/135 (8%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-LDIFQR 524
+ F E +MK I+H NL++++ C+ E +++E+M +G+L YL N +
Sbjct: 54 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL 113
Query: 525 LNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 584
L + ++SA+EYL IH DL N L+ +N + ++DF +++L+TG+ T
Sbjct: 114 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD----TY 166
Query: 585 TQTLGT---IGYMAP 596
T G I + AP
Sbjct: 167 TAHAGAKFPIKWTAP 181
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 71/133 (53%), Gaps = 8/133 (6%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSS-NCILDIFQR 524
++F E ++MK +RH L+++ + S E +V EYM GSL +L L + Q
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQL 116
Query: 525 LNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 584
+++ +AS + Y+ +H DL+ +N+L+ +N+V ++DF +A+L+ ED T
Sbjct: 117 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTA 171
Query: 585 TQTLG-TIGYMAP 596
Q I + AP
Sbjct: 172 RQGAKFPIKWTAP 184
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 72/140 (51%), Gaps = 21/140 (15%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+ F E +MK I+H NL++++ C+ E ++ E+M +G+L YL N Q +
Sbjct: 55 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN-----RQEV 109
Query: 526 NIMI------DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 579
N ++ ++SA+EYL IH DL N L+ +N + ++DF +++L+TG+
Sbjct: 110 NAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD- 165
Query: 580 QSMTQTQTLGT---IGYMAP 596
T T G I + AP
Sbjct: 166 ---TYTAPAGAKFPIKWTAP 182
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 72/133 (54%), Gaps = 8/133 (6%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLY-SSNCILDIFQR 524
++F E ++MK +RH L+++ + S E +V EYM GSL +L + L + Q
Sbjct: 224 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVGEYMSKGSLLDFLKGETGKYLRLPQL 282
Query: 525 LNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 584
+++ +AS + Y+ +H DL+ +N+L+ +N+V ++DF +A+L+ ED T
Sbjct: 283 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTA 337
Query: 585 TQTLG-TIGYMAP 596
Q I + AP
Sbjct: 338 RQGAKFPIKWTAP 350
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 71/133 (53%), Gaps = 8/133 (6%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSS-NCILDIFQR 524
++F E ++MK +RH L+++ + S E +V EYM GSL +L L + Q
Sbjct: 49 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQL 107
Query: 525 LNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 584
+++ +AS + Y+ +H DL+ +N+L+ +N+V ++DF +A+L+ ED T
Sbjct: 108 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTA 162
Query: 585 TQTLG-TIGYMAP 596
Q I + AP
Sbjct: 163 RQGAKFPIKWTAP 175
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 72/133 (54%), Gaps = 8/133 (6%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLY-SSNCILDIFQR 524
++F E ++MK +RH L+++ + S E +V EYM GSL +L + L + Q
Sbjct: 55 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMNKGSLLDFLKGETGKYLRLPQL 113
Query: 525 LNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 584
+++ +AS + Y+ +H DL+ +N+L+ +N+V ++DF +A+L+ ED T
Sbjct: 114 VDMSAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTA 168
Query: 585 TQTLG-TIGYMAP 596
Q I + AP
Sbjct: 169 RQGAKFPIKWTAP 181
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 69/126 (54%), Gaps = 7/126 (5%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++M+ + H L+ + S +EE +V++ + G L +L + + +L I +
Sbjct: 65 ELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFI-CE 123
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ AL+YL + +IH D+KP N+LLD++ H++DF+IA +L E Q T GT
Sbjct: 124 LVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMA---GT 177
Query: 591 IGYMAP 596
YMAP
Sbjct: 178 KPYMAP 183
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 71/133 (53%), Gaps = 8/133 (6%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSS-NCILDIFQR 524
++F E ++MK +RH L+++ + S E +V EYM GSL +L L + Q
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVCEYMSKGSLLDFLKGEMGKYLRLPQL 116
Query: 525 LNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 584
+++ +AS + Y+ +H DL+ +N+L+ +N+V ++DF +A+L+ ED T
Sbjct: 117 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTA 171
Query: 585 TQTLG-TIGYMAP 596
Q I + AP
Sbjct: 172 RQGAKFPIKWTAP 184
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 72/140 (51%), Gaps = 21/140 (15%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+ F E +MK I+H NL++++ C+ E ++ E+M +G+L YL N Q +
Sbjct: 56 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN-----RQEV 110
Query: 526 NIMI------DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 579
N ++ ++SA+EYL IH DL N L+ +N + ++DF +++L+TG+
Sbjct: 111 NAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD- 166
Query: 580 QSMTQTQTLGT---IGYMAP 596
T T G I + AP
Sbjct: 167 ---TYTAPAGAKFPIKWTAP 183
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 69/137 (50%), Gaps = 15/137 (10%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+ F E +MK I+H NL++++ C+ E ++ E+M +G+L YL N Q +
Sbjct: 54 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN-----RQEV 108
Query: 526 NIMI------DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 579
N ++ ++SA+EYL IH DL N L+ +N + ++DF +++L+TG D
Sbjct: 109 NAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-D 164
Query: 580 QSMTQTQTLGTIGYMAP 596
I + AP
Sbjct: 165 TYTAHAGAKFPIKWTAP 181
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 72/140 (51%), Gaps = 21/140 (15%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+ F E +MK I+H NL++++ C+ E ++ E+M +G+L YL N Q +
Sbjct: 54 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN-----RQEV 108
Query: 526 NIMI------DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 579
N ++ ++SA+EYL IH DL N L+ +N + ++DF +++L+TG+
Sbjct: 109 NAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD- 164
Query: 580 QSMTQTQTLGT---IGYMAP 596
T T G I + AP
Sbjct: 165 ---TYTAHAGAKFPIKWTAP 181
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 72/140 (51%), Gaps = 21/140 (15%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+ F E +MK I+H NL++++ C+ E ++ E+M +G+L YL N Q +
Sbjct: 56 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN-----RQEV 110
Query: 526 NIMI------DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 579
N ++ ++SA+EYL IH DL N L+ +N + ++DF +++L+TG+
Sbjct: 111 NAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD- 166
Query: 580 QSMTQTQTLGT---IGYMAP 596
T T G I + AP
Sbjct: 167 ---TYTAHAGAKFPIKWTAP 183
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 72/140 (51%), Gaps = 21/140 (15%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+ F E +MK I+H NL++++ C+ E ++ E+M +G+L YL N Q +
Sbjct: 58 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN-----RQEV 112
Query: 526 NIMI------DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 579
N ++ ++SA+EYL IH DL N L+ +N + ++DF +++L+TG+
Sbjct: 113 NAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD- 168
Query: 580 QSMTQTQTLGT---IGYMAP 596
T T G I + AP
Sbjct: 169 ---TYTAHAGAKFPIKWTAP 185
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 72/140 (51%), Gaps = 21/140 (15%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+ F E +MK I+H NL++++ C+ E ++ E+M +G+L YL N Q +
Sbjct: 67 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN-----RQEV 121
Query: 526 NIMI------DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 579
N ++ ++SA+EYL IH DL N L+ +N + ++DF +++L+TG+
Sbjct: 122 NAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD- 177
Query: 580 QSMTQTQTLGT---IGYMAP 596
T T G I + AP
Sbjct: 178 ---TYTAHAGAKFPIKWTAP 194
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 72/140 (51%), Gaps = 21/140 (15%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+ F E +MK I+H NL++++ C+ E ++ E+M +G+L YL N Q +
Sbjct: 59 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN-----RQEV 113
Query: 526 NIMI------DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 579
N ++ ++SA+EYL IH DL N L+ +N + ++DF +++L+TG+
Sbjct: 114 NAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD- 169
Query: 580 QSMTQTQTLGT---IGYMAP 596
T T G I + AP
Sbjct: 170 ---TYTAHAGAKFPIKWTAP 186
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 72/140 (51%), Gaps = 21/140 (15%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+ F E +MK I+H NL++++ C+ E ++ E+M +G+L YL N Q +
Sbjct: 59 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN-----RQEV 113
Query: 526 NIMI------DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 579
N ++ ++SA+EYL IH DL N L+ +N + ++DF +++L+TG+
Sbjct: 114 NAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD- 169
Query: 580 QSMTQTQTLGT---IGYMAP 596
T T G I + AP
Sbjct: 170 ---TYTAHAGAKFPIKWTAP 186
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 73/146 (50%), Gaps = 10/146 (6%)
Query: 455 RGGFALFIRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYS 514
+GG+ R + F E +M H N+I++ +N ++ E+M +G+L+ +L
Sbjct: 51 KGGYTE--RQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRL 108
Query: 515 SNCILDIFQRLNIMIDVASALEYL-HFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAK 573
++ + Q + ++ +AS + YL Y +H DL N+L++ N+V +SDF +++
Sbjct: 109 NDGQFTVIQLVGMLRGIASGMRYLAEMSY----VHRDLAARNILVNSNLVCKVSDFGLSR 164
Query: 574 LLTGEDQSMTQTQTLG---TIGYMAP 596
L T T +LG I + AP
Sbjct: 165 FLEENSSDPTYTSSLGGKIPIRWTAP 190
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 72/140 (51%), Gaps = 21/140 (15%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+ F E +MK I+H NL++++ C+ E ++ E+M +G+L YL N Q +
Sbjct: 56 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN-----RQEV 110
Query: 526 NIMI------DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 579
N ++ ++SA+EYL IH DL N L+ +N + ++DF +++L+TG+
Sbjct: 111 NAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD- 166
Query: 580 QSMTQTQTLGT---IGYMAP 596
T T G I + AP
Sbjct: 167 ---TYTAHAGAKFPIKWTAP 183
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSN-CILDIFQR 524
+ F E +MK I+H NL++++ C+ E ++ E+M +G+L YL N +
Sbjct: 52 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL 111
Query: 525 LNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 584
L + ++SA+EYL IH DL N L+ +N + ++DF +++L+TG D
Sbjct: 112 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTXTAH 167
Query: 585 TQTLGTIGYMAP 596
I + AP
Sbjct: 168 AGAKFPIKWTAP 179
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 69/135 (51%), Gaps = 8/135 (5%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFK--ALVLEYMPHGSLEKYLYSSNCILDIFQ 523
+ F+ E E++KS++H N++K C + + L++EY+P+GSL YL +D +
Sbjct: 57 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIK 116
Query: 524 RLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMT 583
L + +EYL + IH +L N+L+++ + DF + K+L +D+
Sbjct: 117 LLQYTSQICKGMEYLG---TKRYIHRNLATRNILVENENRVKIGDFGLTKVLP-QDKEYY 172
Query: 584 QTQTLGT--IGYMAP 596
+ + G I + AP
Sbjct: 173 KVKEPGESPIFWYAP 187
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 66/122 (54%), Gaps = 5/122 (4%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+ F E +M H N+I++ + + +V EYM +GSL+ +L + + Q +
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV 150
Query: 526 NIMIDVASALEYL-HFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 584
++ +AS ++YL G+ +H DL N+L++ N+V +SDF ++++L + ++
Sbjct: 151 GMLRGIASGMKYLSDMGF----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 585 TQ 586
T+
Sbjct: 207 TR 208
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 18/148 (12%)
Query: 464 AFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYS--------- 514
A K F E E++ +++H +++K C + + +V EYM HG L K+L +
Sbjct: 60 ARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILV 119
Query: 515 ------SNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSD 568
+ L + Q L+I +AS + YL S +H DL N L+ N++ + D
Sbjct: 120 DGQPRQAKGELGLSQMLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGD 176
Query: 569 FSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
F +++ + D T+ I +M P
Sbjct: 177 FGMSRDVYSTDYYRVGGHTMLPIRWMPP 204
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 67/122 (54%), Gaps = 6/122 (4%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +M H N+I++ S + ++ EYM +G+L+K+L + + Q + ++
Sbjct: 96 EAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRG 155
Query: 531 VASALEYL-HFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLG 589
+A+ ++YL + Y +H DL N+L++ N+V +SDF ++++L +D T T + G
Sbjct: 156 IAAGMKYLANMNY----VHRDLAARNILVNSNLVCKVSDFGLSRVLE-DDPEATYTTSGG 210
Query: 590 TI 591
I
Sbjct: 211 KI 212
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 71/133 (53%), Gaps = 8/133 (6%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSS-NCILDIFQR 524
++F E ++MK +RH L+++ + S E +V+EYM G L +L L + Q
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVMEYMSKGCLLDFLKGEMGKYLRLPQL 116
Query: 525 LNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 584
+++ +AS + Y+ +H DL+ +N+L+ +N+V ++DF +A+L+ ED T
Sbjct: 117 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTA 171
Query: 585 TQTLG-TIGYMAP 596
Q I + AP
Sbjct: 172 RQGAKFPIKWTAP 184
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 70/135 (51%), Gaps = 11/135 (8%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-LDIFQR 524
+ F E +MK I+H NL++++ C+ E ++ E+M +G+L YL N +
Sbjct: 54 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL 113
Query: 525 LNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 584
L + ++SA+EYL IH DL N L+ +N + ++DF +++L+TG+ T
Sbjct: 114 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD----TY 166
Query: 585 TQTLGT---IGYMAP 596
T G I + AP
Sbjct: 167 TAHAGAKFPIKWTAP 181
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 61/118 (51%), Gaps = 9/118 (7%)
Query: 480 HRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 539
H ++I +I S + F LV + M G L YL + L + +IM + A+ +LH
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYL-TEKVALSEKETRSIMRSLLEAVSFLH 217
Query: 540 FGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIA-KLLTGEDQSMTQTQTLGTIGYMAP 596
+ ++H DLKP N+LLDDNM LSDF + L GE + GT GY+AP
Sbjct: 218 ---ANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGE----KLRELCGTPGYLAP 268
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 70/135 (51%), Gaps = 11/135 (8%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-LDIFQR 524
+ F E +MK I+H NL++++ C+ E ++ E+M +G+L YL N +
Sbjct: 54 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL 113
Query: 525 LNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 584
L + ++SA+EYL IH DL N L+ +N + ++DF +++L+TG+ T
Sbjct: 114 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD----TY 166
Query: 585 TQTLGT---IGYMAP 596
T G I + AP
Sbjct: 167 TAHAGAKFPIKWTAP 181
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 63/114 (55%), Gaps = 4/114 (3%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSN-CILDIFQR 524
+ F E +MK I+H NL++++ C+ E ++ E+M +G+L YL N +
Sbjct: 52 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL 111
Query: 525 LNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE 578
L + ++SA+EYL IH DL N L+ +N + ++DF +++L+TG+
Sbjct: 112 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 162
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 70/135 (51%), Gaps = 11/135 (8%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-LDIFQR 524
+ F E +MK I+H NL++++ C+ E ++ E+M +G+L YL N +
Sbjct: 59 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL 118
Query: 525 LNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 584
L + ++SA+EYL IH DL N L+ +N + ++DF +++L+TG+ T
Sbjct: 119 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD----TY 171
Query: 585 TQTLGT---IGYMAP 596
T G I + AP
Sbjct: 172 TAHAGAKFPIKWTAP 186
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 8/133 (6%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSS-NCILDIFQR 524
++F E ++MK +RH L+++ + S E +V EYM GSL +L L + Q
Sbjct: 225 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQL 283
Query: 525 LNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 584
+++ +AS + Y+ +H DL+ +N+L+ +N+V ++DF + +L+ ED T
Sbjct: 284 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLGRLI--EDNEYTA 338
Query: 585 TQTLG-TIGYMAP 596
Q I + AP
Sbjct: 339 RQGAKFPIKWTAP 351
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 70/133 (52%), Gaps = 8/133 (6%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSS-NCILDIFQR 524
++F E ++MK +RH L+++ + S E +V EYM GSL +L L + Q
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQL 116
Query: 525 LNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 584
+++ +AS + Y+ +H DL +N+L+ +N+V ++DF +A+L+ ED T
Sbjct: 117 VDMAAQIASGMAYVE---RMNYVHRDLAAANILVGENLVCKVADFGLARLI--EDNEYTA 171
Query: 585 TQTLG-TIGYMAP 596
Q I + AP
Sbjct: 172 RQGAKFPIKWTAP 184
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 68/132 (51%), Gaps = 5/132 (3%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-LDIFQR 524
+ F E +MK I+H NL++++ C+ E ++ E+M +G+L YL N ++
Sbjct: 258 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 317
Query: 525 LNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 584
L + ++SA+EYL IH +L N L+ +N + ++DF +++L+TG D
Sbjct: 318 LYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAH 373
Query: 585 TQTLGTIGYMAP 596
I + AP
Sbjct: 374 AGAKFPIKWTAP 385
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 68/132 (51%), Gaps = 5/132 (3%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-LDIFQR 524
+ F E +MK I+H NL++++ C+ E ++ E+M +G+L YL N ++
Sbjct: 300 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 359
Query: 525 LNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 584
L + ++SA+EYL IH +L N L+ +N + ++DF +++L+TG D
Sbjct: 360 LYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAH 415
Query: 585 TQTLGTIGYMAP 596
I + AP
Sbjct: 416 AGAKFPIKWTAP 427
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 65/134 (48%), Gaps = 10/134 (7%)
Query: 455 RGGFALFIRAFKS-------FDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 507
RG + + I+ K F E ++M ++ H L+++ C+ + ++ EYM +G
Sbjct: 46 RGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGC 105
Query: 508 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLS 567
L YL Q L + DV A+EYL S +H DL N L++D V +S
Sbjct: 106 LLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVS 162
Query: 568 DFSIAKLLTGEDQS 581
DF +++ + ++++
Sbjct: 163 DFGLSRYVLDDEET 176
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 8/133 (6%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSS-NCILDIFQR 524
++F E ++MK +RH L+++ + S E +V EYM G L +L L + Q
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGCLLDFLKGEMGKYLRLPQL 116
Query: 525 LNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 584
+++ +AS + Y+ +H DL+ +N+L+ +N+V ++DF +A+L+ ED T
Sbjct: 117 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTA 171
Query: 585 TQTLG-TIGYMAP 596
Q I + AP
Sbjct: 172 RQGAKFPIKWTAP 184
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-LDIFQR 524
+ F E +MK I+H NL++++ C+ E ++ E+M +G+L YL N +
Sbjct: 261 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL 320
Query: 525 LNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 584
L + ++SA+EYL IH +L N L+ +N + ++DF +++L+TG D
Sbjct: 321 LYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAH 376
Query: 585 TQTLGTIGYMAP 596
I + AP
Sbjct: 377 AGAKFPIKWTAP 388
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 73/140 (52%), Gaps = 13/140 (9%)
Query: 463 RAFKSFDV------ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSN 516
+ +S DV E + +K RH ++IK+ S +V+EY+ G L Y+
Sbjct: 47 QKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHG 106
Query: 517 CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT 576
+ ++ R + + SA++Y H +V+H DLKP NVLLD +M A ++DF ++ +++
Sbjct: 107 RVEEMEAR-RLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS 162
Query: 577 GEDQSMTQTQTLGTIGYMAP 596
D +T + G+ Y AP
Sbjct: 163 --DGEFLRT-SCGSPNYAAP 179
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+ F E +M H N+I++ + + +V E M +GSL+ +L + + Q +
Sbjct: 62 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLV 121
Query: 526 NIMIDVASALEYL-HFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 584
++ +AS ++YL GY +H DL N+L++ N+V +SDF ++++L + ++
Sbjct: 122 GMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 177
Query: 585 TQ 586
T+
Sbjct: 178 TR 179
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+ F E +M H N+I++ + + +V E M +GSL+ +L + + Q +
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLV 150
Query: 526 NIMIDVASALEYL-HFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 584
++ +AS ++YL GY +H DL N+L++ N+V +SDF ++++L + ++
Sbjct: 151 GMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 585 TQ 586
T+
Sbjct: 207 TR 208
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 15/145 (10%)
Query: 464 AFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSN------- 516
A K F E E++ +++H +++K C + +V EYM HG L K+L +
Sbjct: 58 ARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMA 117
Query: 517 -----CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSI 571
L Q L+I +A+ + YL S +H DL N L+ +N++ + DF +
Sbjct: 118 EGNPPTELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGM 174
Query: 572 AKLLTGEDQSMTQTQTLGTIGYMAP 596
++ + D T+ I +M P
Sbjct: 175 SRDVYSTDYYRVGGHTMLPIRWMPP 199
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 17/138 (12%)
Query: 470 VECEMMKSIRHRNLIKV------ISSCSNEEFKALVLEYMPHGSLEKYL--YSSNCILDI 521
+E ++MK + H N++ + + + L +EY G L KYL + + C L
Sbjct: 61 LEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKE 120
Query: 522 FQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLD---DNMVAHLSDFSIAKLLTGE 578
++ D++SAL YLH +IH DLKP N++L ++ + D AK L
Sbjct: 121 GPIRTLLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--- 174
Query: 579 DQSMTQTQTLGTIGYMAP 596
DQ T+ +GT+ Y+AP
Sbjct: 175 DQGELCTEFVGTLQYLAP 192
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 17/138 (12%)
Query: 470 VECEMMKSIRHRNLIKV------ISSCSNEEFKALVLEYMPHGSLEKYL--YSSNCILDI 521
+E ++MK + H N++ + + + L +EY G L KYL + + C L
Sbjct: 62 LEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKE 121
Query: 522 FQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLD---DNMVAHLSDFSIAKLLTGE 578
++ D++SAL YLH +IH DLKP N++L ++ + D AK L
Sbjct: 122 GPIRTLLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--- 175
Query: 579 DQSMTQTQTLGTIGYMAP 596
DQ T+ +GT+ Y+AP
Sbjct: 176 DQGELCTEFVGTLQYLAP 193
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 73/182 (40%), Gaps = 37/182 (20%)
Query: 446 EFSENNLIGRGGFALFIRAF-----------------------KSFDVECEMMKSIRHRN 482
E + +IG GGF RAF ++ E ++ ++H N
Sbjct: 8 ELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPN 67
Query: 483 LIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGY 542
+I + C E LV+E+ G L + L DI +N + +A + YLH
Sbjct: 68 IIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDIL--VNWAVQIARGMNYLHDEA 125
Query: 543 SALVIHCDLKPSNVLLDD--------NMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYM 594
+IH DLK SN+L+ N + ++DF +A+ E T+ G +M
Sbjct: 126 IVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR----EWHRTTKMSAAGAYAWM 181
Query: 595 AP 596
AP
Sbjct: 182 AP 183
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 66/126 (52%), Gaps = 6/126 (4%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
++F E ++M+ + H N++K I ++ + EY+ G+L + S + QR+
Sbjct: 52 RTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRV 111
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 585
+ D+AS + YLH S +IH DL N L+ +N ++DF +A+L+ E TQ
Sbjct: 112 SFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEK---TQP 165
Query: 586 QTLGTI 591
+ L ++
Sbjct: 166 EGLRSL 171
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 10/132 (7%)
Query: 455 RGGFALFIRAFKS-------FDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 507
RG + + I+ K F E ++M ++ H L+++ C+ + ++ EYM +G
Sbjct: 46 RGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGC 105
Query: 508 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLS 567
L YL Q L + DV A+EYL S +H DL N L++D V +S
Sbjct: 106 LLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVS 162
Query: 568 DFSIAKLLTGED 579
DF +++ + ++
Sbjct: 163 DFGLSRYVLDDE 174
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 74/160 (46%), Gaps = 20/160 (12%)
Query: 435 FSYLELCRATDEFSENNLIGRGGFALFIRAFK---------SFDVECEMMKSIRHRNLIK 485
F +ELCR E G + +++ K E E+++++ H N++K
Sbjct: 34 FGKVELCRYDPEGDNT------GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVK 87
Query: 486 VISSCSNEEFKA--LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYS 543
C+ + L++E++P GSL++YL + +++ Q+L + + ++YL S
Sbjct: 88 YKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---S 144
Query: 544 ALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMT 583
+H DL NVL++ + DF + K + + + T
Sbjct: 145 RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXT 184
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 10/132 (7%)
Query: 455 RGGFALFIRAFKS-------FDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 507
RG + + I+ K F E ++M ++ H L+++ C+ + ++ EYM +G
Sbjct: 37 RGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGC 96
Query: 508 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLS 567
L YL Q L + DV A+EYL S +H DL N L++D V +S
Sbjct: 97 LLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVS 153
Query: 568 DFSIAKLLTGED 579
DF +++ + ++
Sbjct: 154 DFGLSRYVLDDE 165
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 10/132 (7%)
Query: 455 RGGFALFIRAFKS-------FDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 507
RG + + I+ K F E ++M ++ H L+++ C+ + ++ EYM +G
Sbjct: 31 RGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGC 90
Query: 508 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLS 567
L YL Q L + DV A+EYL S +H DL N L++D V +S
Sbjct: 91 LLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVS 147
Query: 568 DFSIAKLLTGED 579
DF +++ + ++
Sbjct: 148 DFGLSRYVLDDE 159
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 10/132 (7%)
Query: 455 RGGFALFIRAFKS-------FDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 507
RG + + I+ K F E ++M ++ H L+++ C+ + ++ EYM +G
Sbjct: 31 RGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGC 90
Query: 508 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLS 567
L YL Q L + DV A+EYL S +H DL N L++D V +S
Sbjct: 91 LLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVS 147
Query: 568 DFSIAKLLTGED 579
DF +++ + ++
Sbjct: 148 DFGLSRYVLDDE 159
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 70/170 (41%), Gaps = 25/170 (14%)
Query: 446 EFSENNLIGRGGFALFIRA-----------------FKSFDVECEMMKSIRHRNLIKVIS 488
E ++GRG F + +A K+F VE + + H N++K+
Sbjct: 10 EIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYG 69
Query: 489 SCSNEEFKALVLEYMPHGSLEKYLYSSNCI--LDIFQRLNIMIDVASALEYLHFGYSALV 546
+C N LV+EY GSL L+ + + ++ + + + YLH +
Sbjct: 70 ACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKAL 127
Query: 547 IHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
IH DLKP N+LL VA + I T D T G+ +MAP
Sbjct: 128 IHRDLKPPNLLL----VAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAP 173
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 66/122 (54%), Gaps = 5/122 (4%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+ F E +M H N+I + + + +V EYM +GSL+ +L ++ + Q +
Sbjct: 68 RDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLV 127
Query: 526 NIMIDVASALEYL-HFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 584
++ +++ ++YL GY +H DL N+L++ N+V +SDF ++++L + ++
Sbjct: 128 GMLRGISAGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 183
Query: 585 TQ 586
T+
Sbjct: 184 TR 185
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 70/170 (41%), Gaps = 25/170 (14%)
Query: 446 EFSENNLIGRGGFALFIRA-----------------FKSFDVECEMMKSIRHRNLIKVIS 488
E ++GRG F + +A K+F VE + + H N++K+
Sbjct: 9 EIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYG 68
Query: 489 SCSNEEFKALVLEYMPHGSLEKYLYSSNCI--LDIFQRLNIMIDVASALEYLHFGYSALV 546
+C N LV+EY GSL L+ + + ++ + + + YLH +
Sbjct: 69 ACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKAL 126
Query: 547 IHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
IH DLKP N+LL VA + I T D T G+ +MAP
Sbjct: 127 IHRDLKPPNLLL----VAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAP 172
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 522
+ ++F E +++ RH N++ + + + A+V ++ SL +L++S ++
Sbjct: 50 QQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHASETKFEMK 108
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582
+ ++I A ++YLH + +IH DLK +N+ L ++ + DF +A + + S
Sbjct: 109 KLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSH 165
Query: 583 TQTQTLGTIGYMAP 596
Q G+I +MAP
Sbjct: 166 QFEQLSGSILWMAP 179
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 74/160 (46%), Gaps = 20/160 (12%)
Query: 435 FSYLELCRATDEFSENNLIGRGGFALFIRAFK---------SFDVECEMMKSIRHRNLIK 485
F +ELCR E G + +++ K E E+++++ H N++K
Sbjct: 22 FGKVELCRYDPEGDNT------GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVK 75
Query: 486 VISSCSNEEFKA--LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYS 543
C+ + L++E++P GSL++YL + +++ Q+L + + ++YL S
Sbjct: 76 YKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---S 132
Query: 544 ALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMT 583
+H DL NVL++ + DF + K + + + T
Sbjct: 133 RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXT 172
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 65/133 (48%), Gaps = 10/133 (7%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFK-ALVLEYMPHGSLEKYLYS-SNCILDIFQ 523
++F E +M +RH NL++++ E+ +V EYM GSL YL S +L
Sbjct: 50 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC 109
Query: 524 RLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMT 583
L +DV A+EYL +H DL NVL+ ++ VA +SDF + K + S T
Sbjct: 110 LLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTK-----EASST 161
Query: 584 QTQTLGTIGYMAP 596
Q + + AP
Sbjct: 162 QDTGKLPVKWTAP 174
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 72/140 (51%), Gaps = 13/140 (9%)
Query: 463 RAFKSFDV------ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSN 516
+ +S DV E + +K RH ++IK+ S +V+EY+ G L Y+
Sbjct: 47 QKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHG 106
Query: 517 CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT 576
+ ++ R + + SA++Y H +V+H DLKP NVLLD +M A ++DF ++ +++
Sbjct: 107 RVEEMEAR-RLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS 162
Query: 577 GEDQSMTQTQTLGTIGYMAP 596
D + + G+ Y AP
Sbjct: 163 --DGEFLR-DSCGSPNYAAP 179
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 10/132 (7%)
Query: 455 RGGFALFIRAFKS-------FDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 507
RG + + I+ K F E ++M ++ H L+++ C+ + ++ EYM +G
Sbjct: 30 RGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGC 89
Query: 508 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLS 567
L YL Q L + DV A+EYL S +H DL N L++D V +S
Sbjct: 90 LLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVS 146
Query: 568 DFSIAKLLTGED 579
DF +++ + ++
Sbjct: 147 DFGLSRYVLDDE 158
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 66/134 (49%), Gaps = 6/134 (4%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+ F E +M H N+I + + ++ E+M +GSL+ +L ++ + Q +
Sbjct: 79 RDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLV 138
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 585
++ +A+ ++YL +H DL N+L++ N+V +SDF +++ L + T T
Sbjct: 139 GMLRGIAAGMKYLA---DMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYT 195
Query: 586 QTLG---TIGYMAP 596
LG I + AP
Sbjct: 196 SALGGKIPIRWTAP 209
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 10/132 (7%)
Query: 455 RGGFALFIRAFKS-------FDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 507
RG + + I+ K F E ++M ++ H L+++ C+ + ++ EYM +G
Sbjct: 26 RGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGC 85
Query: 508 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLS 567
L YL Q L + DV A+EYL S +H DL N L++D V +S
Sbjct: 86 LLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVS 142
Query: 568 DFSIAKLLTGED 579
DF +++ + ++
Sbjct: 143 DFGLSRYVLDDE 154
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 65/133 (48%), Gaps = 10/133 (7%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFK-ALVLEYMPHGSLEKYLYS-SNCILDIFQ 523
++F E +M +RH NL++++ E+ +V EYM GSL YL S +L
Sbjct: 59 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC 118
Query: 524 RLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMT 583
L +DV A+EYL +H DL NVL+ ++ VA +SDF + K + S T
Sbjct: 119 LLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTK-----EASST 170
Query: 584 QTQTLGTIGYMAP 596
Q + + AP
Sbjct: 171 QDTGKLPVKWTAP 183
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 71/132 (53%), Gaps = 8/132 (6%)
Query: 467 SFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-LDIFQRL 525
+F E +MK ++H+ L+++ + + E ++ EYM +GSL +L + + I L I + L
Sbjct: 62 AFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLL 120
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 585
++ +A + ++ IH DL+ +N+L+ D + ++DF +A+L+ ED T
Sbjct: 121 DMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI--EDNEXTAR 175
Query: 586 QTLG-TIGYMAP 596
+ I + AP
Sbjct: 176 EGAKFPIKWTAP 187
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 63/121 (52%), Gaps = 3/121 (2%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+ F E +M H N+I++ + + +V E M +GSL+ +L + + Q +
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLV 150
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 585
++ +AS ++YL +H DL N+L++ N+V +SDF ++++L + ++ T
Sbjct: 151 GMLRGIASGMKYLS---DMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 586 Q 586
+
Sbjct: 208 R 208
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 71/132 (53%), Gaps = 8/132 (6%)
Query: 467 SFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-LDIFQRL 525
+F E +MK ++H+ L+++ + + E ++ EYM +GSL +L + + I L I + L
Sbjct: 63 AFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLL 121
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 585
++ +A + ++ IH DL+ +N+L+ D + ++DF +A+L+ ED T
Sbjct: 122 DMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI--EDNEXTAR 176
Query: 586 QTLG-TIGYMAP 596
+ I + AP
Sbjct: 177 EGAKFPIKWTAP 188
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 71/132 (53%), Gaps = 8/132 (6%)
Query: 467 SFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-LDIFQRL 525
+F E +MK ++H+ L+++ + + E ++ EYM +GSL +L + + I L I + L
Sbjct: 60 AFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLL 118
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 585
++ +A + ++ IH DL+ +N+L+ D + ++DF +A+L+ ED T
Sbjct: 119 DMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI--EDNEXTAR 173
Query: 586 QTLG-TIGYMAP 596
+ I + AP
Sbjct: 174 EGAKFPIKWTAP 185
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 71/132 (53%), Gaps = 8/132 (6%)
Query: 467 SFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-LDIFQRL 525
+F E +MK ++H+ L+++ + + E ++ EYM +GSL +L + + I L I + L
Sbjct: 54 AFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLL 112
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 585
++ +A + ++ IH DL+ +N+L+ D + ++DF +A+L+ ED T
Sbjct: 113 DMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI--EDNEXTAR 167
Query: 586 QTLG-TIGYMAP 596
+ I + AP
Sbjct: 168 EGAKFPIKWTAP 179
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 71/132 (53%), Gaps = 8/132 (6%)
Query: 467 SFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-LDIFQRL 525
+F E +MK ++H+ L+++ + + E ++ EYM +GSL +L + + I L I + L
Sbjct: 56 AFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLL 114
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 585
++ +A + ++ IH DL+ +N+L+ D + ++DF +A+L+ ED T
Sbjct: 115 DMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI--EDNEXTAR 169
Query: 586 QTLG-TIGYMAP 596
+ I + AP
Sbjct: 170 EGAKFPIKWTAP 181
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 71/132 (53%), Gaps = 8/132 (6%)
Query: 467 SFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-LDIFQRL 525
+F E +MK ++H+ L+++ + + E ++ EYM +GSL +L + + I L I + L
Sbjct: 54 AFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLL 112
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 585
++ +A + ++ IH DL+ +N+L+ D + ++DF +A+L+ ED T
Sbjct: 113 DMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI--EDNEXTAR 167
Query: 586 QTLG-TIGYMAP 596
+ I + AP
Sbjct: 168 EGAKFPIKWTAP 179
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 71/140 (50%), Gaps = 13/140 (9%)
Query: 463 RAFKSFDV------ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSN 516
+ +S DV E + +K RH ++IK+ S +V+EY+ G L Y+ N
Sbjct: 52 QKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYI-CKN 110
Query: 517 CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT 576
LD + + + S ++Y H +V+H DLKP NVLLD +M A ++DF ++ +++
Sbjct: 111 GRLDEKESRRLFQQILSGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS 167
Query: 577 GEDQSMTQTQTLGTIGYMAP 596
D + + G+ Y AP
Sbjct: 168 --DGEFLRX-SCGSPNYAAP 184
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 71/132 (53%), Gaps = 8/132 (6%)
Query: 467 SFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-LDIFQRL 525
+F E +MK ++H+ L+++ + + E ++ EYM +GSL +L + + I L I + L
Sbjct: 55 AFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLL 113
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 585
++ +A + ++ IH DL+ +N+L+ D + ++DF +A+L+ ED T
Sbjct: 114 DMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI--EDNEXTAR 168
Query: 586 QTLG-TIGYMAP 596
+ I + AP
Sbjct: 169 EGAKFPIKWTAP 180
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 71/132 (53%), Gaps = 8/132 (6%)
Query: 467 SFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-LDIFQRL 525
+F E +MK ++H+ L+++ + + E ++ EYM +GSL +L + + I L I + L
Sbjct: 54 AFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLL 112
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 585
++ +A + ++ IH DL+ +N+L+ D + ++DF +A+L+ ED T
Sbjct: 113 DMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI--EDAEXTAR 167
Query: 586 QTLG-TIGYMAP 596
+ I + AP
Sbjct: 168 EGAKFPIKWTAP 179
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 65/133 (48%), Gaps = 10/133 (7%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFK-ALVLEYMPHGSLEKYLYS-SNCILDIFQ 523
++F E +M +RH NL++++ E+ +V EYM GSL YL S +L
Sbjct: 44 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC 103
Query: 524 RLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMT 583
L +DV A+EYL +H DL NVL+ ++ VA +SDF + K + S T
Sbjct: 104 LLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTK-----EASST 155
Query: 584 QTQTLGTIGYMAP 596
Q + + AP
Sbjct: 156 QDTGKLPVKWTAP 168
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 71/132 (53%), Gaps = 8/132 (6%)
Query: 467 SFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-LDIFQRL 525
+F E +MK ++H+ L+++ + + E ++ EYM +GSL +L + + I L I + L
Sbjct: 54 AFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLL 112
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 585
++ +A + ++ IH DL+ +N+L+ D + ++DF +A+L+ ED T
Sbjct: 113 DMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI--EDNEYTAR 167
Query: 586 QTLG-TIGYMAP 596
+ I + AP
Sbjct: 168 EGAKFPIKWTAP 179
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 71/132 (53%), Gaps = 8/132 (6%)
Query: 467 SFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-LDIFQRL 525
+F E +MK ++H+ L+++ + + E ++ EYM +GSL +L + + I L I + L
Sbjct: 60 AFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLL 118
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 585
++ +A + ++ IH DL+ +N+L+ D + ++DF +A+L+ ED T
Sbjct: 119 DMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI--EDNEYTAR 173
Query: 586 QTLG-TIGYMAP 596
+ I + AP
Sbjct: 174 EGAKFPIKWTAP 185
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 71/132 (53%), Gaps = 8/132 (6%)
Query: 467 SFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-LDIFQRL 525
+F E +MK ++H+ L+++ + + E ++ EYM +GSL +L + + I L I + L
Sbjct: 59 AFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLL 117
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 585
++ +A + ++ IH DL+ +N+L+ D + ++DF +A+L+ ED T
Sbjct: 118 DMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI--EDNEYTAR 172
Query: 586 QTLG-TIGYMAP 596
+ I + AP
Sbjct: 173 EGAKFPIKWTAP 184
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 71/132 (53%), Gaps = 8/132 (6%)
Query: 467 SFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-LDIFQRL 525
+F E +MK ++H+ L+++ + + E ++ EYM +GSL +L + + I L I + L
Sbjct: 64 AFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLL 122
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 585
++ +A + ++ IH DL+ +N+L+ D + ++DF +A+L+ ED T
Sbjct: 123 DMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI--EDNEYTAR 177
Query: 586 QTLG-TIGYMAP 596
+ I + AP
Sbjct: 178 EGAKFPIKWTAP 189
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 68/134 (50%), Gaps = 4/134 (2%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 522
+ ++F E +++ RH N++ + + + A+V ++ SL +L+ ++
Sbjct: 51 QQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMI 109
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582
+ ++I A ++YLH + +IH DLK +N+ L +++ + DF +A + + S
Sbjct: 110 KLIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSH 166
Query: 583 TQTQTLGTIGYMAP 596
Q G+I +MAP
Sbjct: 167 QFEQLSGSILWMAP 180
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 65/133 (48%), Gaps = 10/133 (7%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFK-ALVLEYMPHGSLEKYLYS-SNCILDIFQ 523
++F E +M +RH NL++++ E+ +V EYM GSL YL S +L
Sbjct: 231 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC 290
Query: 524 RLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMT 583
L +DV A+EYL +H DL NVL+ ++ VA +SDF + K + S T
Sbjct: 291 LLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTK-----EASST 342
Query: 584 QTQTLGTIGYMAP 596
Q + + AP
Sbjct: 343 QDTGKLPVKWTAP 355
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 61/129 (47%), Gaps = 4/129 (3%)
Query: 468 FDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNI 527
F E + M + H L+K CS E +V EY+ +G L YL S L+ Q L +
Sbjct: 50 FFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEM 109
Query: 528 MIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQT 587
DV + +L S IH DL N L+D ++ +SDF + + + +DQ ++ T
Sbjct: 110 CYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVL-DDQYVSSVGT 165
Query: 588 LGTIGYMAP 596
+ + AP
Sbjct: 166 KFPVKWSAP 174
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 60/110 (54%), Gaps = 7/110 (6%)
Query: 468 FDVECEMMKSIRHRNLIKVISSCSNEEFKA--LVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+ E E+++++ H +++K C ++ K+ LV+EY+P GSL YL +C+ + Q L
Sbjct: 57 WQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL-PRHCV-GLAQLL 114
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLL 575
+ + YLH + IH L NVLLD++ + + DF +AK +
Sbjct: 115 LFAQQICEGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAV 161
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 68/134 (50%), Gaps = 4/134 (2%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 522
+ ++F E +++ RH N++ + + + A+V ++ SL +L+ ++
Sbjct: 46 QQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMI 104
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582
+ ++I A ++YLH + +IH DLK +N+ L +++ + DF +A + + S
Sbjct: 105 KLIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSH 161
Query: 583 TQTQTLGTIGYMAP 596
Q G+I +MAP
Sbjct: 162 QFEQLSGSILWMAP 175
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 60/110 (54%), Gaps = 7/110 (6%)
Query: 468 FDVECEMMKSIRHRNLIKVISSCSNEEFKA--LVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+ E E+++++ H +++K C ++ K+ LV+EY+P GSL YL +C+ + Q L
Sbjct: 58 WQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL-PRHCV-GLAQLL 115
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLL 575
+ + YLH + IH L NVLLD++ + + DF +AK +
Sbjct: 116 LFAQQICEGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAV 162
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 68/134 (50%), Gaps = 4/134 (2%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 522
+ ++F E +++ RH N++ + + + A+V ++ SL +L+ ++
Sbjct: 74 QQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMI 132
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582
+ ++I A ++YLH + +IH DLK +N+ L +++ + DF +A + + S
Sbjct: 133 KLIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSH 189
Query: 583 TQTQTLGTIGYMAP 596
Q G+I +MAP
Sbjct: 190 QFEQLSGSILWMAP 203
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 66/127 (51%), Gaps = 6/127 (4%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+ F E +M H N++ + + + +V+E+M +G+L+ +L + + Q +
Sbjct: 89 RDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLV 148
Query: 526 NIMIDVASALEYL-HFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 584
++ +A+ + YL GY +H DL N+L++ N+V +SDF +++++ +D
Sbjct: 149 GMLRGIAAGMRYLADMGY----VHRDLAARNILVNSNLVCKVSDFGLSRVIE-DDPEAVY 203
Query: 585 TQTLGTI 591
T T G I
Sbjct: 204 TTTGGKI 210
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 71/132 (53%), Gaps = 8/132 (6%)
Query: 467 SFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-LDIFQRL 525
+F E +MK ++H+ L+++ + + E ++ EYM +GSL +L + + I L I + L
Sbjct: 49 AFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLL 107
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 585
++ +A + ++ IH DL+ +N+L+ D + ++DF +A+L+ ED T
Sbjct: 108 DMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI--EDNEYTAR 162
Query: 586 QTLG-TIGYMAP 596
+ I + AP
Sbjct: 163 EGAKFPIKWTAP 174
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 68/134 (50%), Gaps = 4/134 (2%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 522
+ ++F E +++ RH N++ + + + A+V ++ SL +L++S ++
Sbjct: 62 QQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHASETKFEMK 120
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582
+ ++I A ++YLH + +IH DLK +N+ L ++ + DF +A + S
Sbjct: 121 KLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSH 177
Query: 583 TQTQTLGTIGYMAP 596
Q G+I +MAP
Sbjct: 178 QFEQLSGSILWMAP 191
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 66/150 (44%), Gaps = 23/150 (15%)
Query: 464 AFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSN------- 516
A + F E E++ ++H+++++ C+ +V EYM HG L ++L S
Sbjct: 86 ARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLA 145
Query: 517 -------CILDIFQRLNIMIDVASALEY---LHFGYSALVIHCDLKPSNVLLDDNMVAHL 566
L + Q L + VA+ + Y LHF +H DL N L+ +V +
Sbjct: 146 GGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHF------VHRDLATRNCLVGQGLVVKI 199
Query: 567 SDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
DF +++ + D +T+ I +M P
Sbjct: 200 GDFGMSRDIYSTDYYRVGGRTMLPIRWMPP 229
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 68/134 (50%), Gaps = 4/134 (2%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 522
+ ++F E +++ RH N++ + + + A+V ++ SL +L+ ++
Sbjct: 51 QQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMI 109
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582
+ ++I A ++YLH + +IH DLK +N+ L +++ + DF +A + + S
Sbjct: 110 KLIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSH 166
Query: 583 TQTQTLGTIGYMAP 596
Q G+I +MAP
Sbjct: 167 QFEQLSGSILWMAP 180
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 68/134 (50%), Gaps = 4/134 (2%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 522
+ ++F E +++ RH N++ + + + A+V ++ SL +L+ ++
Sbjct: 48 QQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMI 106
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582
+ ++I A ++YLH + +IH DLK +N+ L +++ + DF +A + + S
Sbjct: 107 KLIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSH 163
Query: 583 TQTQTLGTIGYMAP 596
Q G+I +MAP
Sbjct: 164 QFEQLSGSILWMAP 177
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 70/142 (49%), Gaps = 19/142 (13%)
Query: 471 ECEMMKSI-RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL---------YSSNCILD 520
E EMMK I +H+N+I ++ +C+ + +++EY G+L +YL YS N +
Sbjct: 124 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 183
Query: 521 IFQRL------NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKL 574
++L + VA +EYL S IH DL NVL+ ++ V ++DF +A+
Sbjct: 184 PEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARD 240
Query: 575 LTGEDQSMTQTQTLGTIGYMAP 596
+ D T + +MAP
Sbjct: 241 IHHIDYYKKTTNGRLPVKWMAP 262
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 68/134 (50%), Gaps = 4/134 (2%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 522
+ ++F E +++ RH N++ + + + A+V ++ SL +L+ ++
Sbjct: 73 QQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMI 131
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582
+ ++I A ++YLH + +IH DLK +N+ L +++ + DF +A + + S
Sbjct: 132 KLIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSH 188
Query: 583 TQTQTLGTIGYMAP 596
Q G+I +MAP
Sbjct: 189 QFEQLSGSILWMAP 202
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 70/146 (47%), Gaps = 22/146 (15%)
Query: 466 KSFDVECEMMKSIRHR-NLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI------ 518
+ F E E++ + H N+I ++ +C + + L +EY PHG+L +L S +
Sbjct: 70 RDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAF 129
Query: 519 ---------LDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDF 569
L Q L+ DVA ++YL IH DL N+L+ +N VA ++DF
Sbjct: 130 AIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADF 186
Query: 570 SIAKLLTGEDQSMTQTQTLGTIGYMA 595
+++ G++ + +T + +MA
Sbjct: 187 GLSR---GQEVYVKKTMGRLPVRWMA 209
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 70/146 (47%), Gaps = 22/146 (15%)
Query: 466 KSFDVECEMMKSIRHR-NLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI------ 518
+ F E E++ + H N+I ++ +C + + L +EY PHG+L +L S +
Sbjct: 60 RDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAF 119
Query: 519 ---------LDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDF 569
L Q L+ DVA ++YL IH DL N+L+ +N VA ++DF
Sbjct: 120 AIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADF 176
Query: 570 SIAKLLTGEDQSMTQTQTLGTIGYMA 595
+++ G++ + +T + +MA
Sbjct: 177 GLSR---GQEVYVKKTMGRLPVRWMA 199
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 68/165 (41%), Gaps = 36/165 (21%)
Query: 442 RATDEFSENNLIGRGGFALFIRAFKSFDVECEMMKSIRH--------------------- 480
R +F E ++G+G F ++A + D +K IRH
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQ 62
Query: 481 ------------RNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIM 528
RN +K +++ + + +EY +G+L ++S N + +
Sbjct: 63 YVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLF 122
Query: 529 IDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAK 573
+ AL Y+H S +IH DLKP N+ +D++ + DF +AK
Sbjct: 123 RQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAK 164
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 68/134 (50%), Gaps = 4/134 (2%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 522
+ ++F E +++ RH N++ + + + A+V ++ SL +L+ ++
Sbjct: 46 QQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQL-AIVTQWCEGSSLYHHLHIIETKFEMI 104
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582
+ ++I A ++YLH + +IH DLK +N+ L +++ + DF +A + + S
Sbjct: 105 KLIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSH 161
Query: 583 TQTQTLGTIGYMAP 596
Q G+I +MAP
Sbjct: 162 QFEQLSGSILWMAP 175
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 70/142 (49%), Gaps = 19/142 (13%)
Query: 471 ECEMMKSI-RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL-----------YSSNCI 518
E EMMK I +H+N+I ++ +C+ + +++EY G+L +YL Y N +
Sbjct: 90 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRV 149
Query: 519 LD---IFQRL-NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKL 574
+ F+ L + +A +EYL S IH DL NVL+ +N V ++DF +A+
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 575 LTGEDQSMTQTQTLGTIGYMAP 596
+ D T + +MAP
Sbjct: 207 INNIDXXKKTTNGRLPVKWMAP 228
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 70/142 (49%), Gaps = 19/142 (13%)
Query: 471 ECEMMKSI-RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL-----------YSSNCI 518
E EMMK I +H+N+I ++ +C+ + +++EY G+L +YL Y N +
Sbjct: 90 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 519 LD---IFQRL-NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKL 574
+ F+ L + +A +EYL S IH DL NVL+ +N V ++DF +A+
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 575 LTGEDQSMTQTQTLGTIGYMAP 596
+ D T + +MAP
Sbjct: 207 INNIDXXKKTTNGRLPVKWMAP 228
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 66/150 (44%), Gaps = 23/150 (15%)
Query: 464 AFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSN------- 516
A + F E E++ ++H+++++ C+ +V EYM HG L ++L S
Sbjct: 57 ARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLA 116
Query: 517 -------CILDIFQRLNIMIDVASALEY---LHFGYSALVIHCDLKPSNVLLDDNMVAHL 566
L + Q L + VA+ + Y LHF +H DL N L+ +V +
Sbjct: 117 GGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHF------VHRDLATRNCLVGQGLVVKI 170
Query: 567 SDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
DF +++ + D +T+ I +M P
Sbjct: 171 GDFGMSRDIYSTDYYRVGGRTMLPIRWMPP 200
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 63/128 (49%), Gaps = 7/128 (5%)
Query: 470 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 529
E E +K++RH+++ ++ +VLEY P G L Y+ S + + + R+ +
Sbjct: 57 TEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRV-VFR 115
Query: 530 DVASALEYLHF-GYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTL 588
+ SA+ Y+H GY+ H DLKP N+L D+ L DF + G QT
Sbjct: 116 QIVSAVAYVHSQGYA----HRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQT-CC 170
Query: 589 GTIGYMAP 596
G++ Y AP
Sbjct: 171 GSLAYAAP 178
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 70/142 (49%), Gaps = 19/142 (13%)
Query: 471 ECEMMKSI-RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL---------YSSNCILD 520
E EMMK I +H+N+I ++ +C+ + +++EY G+L +YL YS N +
Sbjct: 75 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 134
Query: 521 IFQRL------NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKL 574
++L + VA +EYL S IH DL NVL+ ++ V ++DF +A+
Sbjct: 135 PEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARD 191
Query: 575 LTGEDQSMTQTQTLGTIGYMAP 596
+ D T + +MAP
Sbjct: 192 IHHIDYYKKTTNGRLPVKWMAP 213
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 7/107 (6%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKAL--VLEYMPHGSLEKYLYSSNCILDIFQRLNIM 528
E ++++++ H ++IK C ++ K+L V+EY+P GSL YL + + + Q L
Sbjct: 66 EIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS--IGLAQLLLFA 123
Query: 529 IDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLL 575
+ + YLH S IH +L NVLLD++ + + DF +AK +
Sbjct: 124 QQICEGMAYLH---SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAV 167
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 70/142 (49%), Gaps = 19/142 (13%)
Query: 471 ECEMMKSI-RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL-----------YSSNCI 518
E EMMK I +H+N+I ++ +C+ + +++EY G+L +YL Y N +
Sbjct: 90 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 519 LD---IFQRL-NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKL 574
+ F+ L + +A +EYL S IH DL NVL+ +N V ++DF +A+
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMRIADFGLARD 206
Query: 575 LTGEDQSMTQTQTLGTIGYMAP 596
+ D T + +MAP
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAP 228
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 70/142 (49%), Gaps = 19/142 (13%)
Query: 471 ECEMMKSI-RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL---------YSSNCILD 520
E EMMK I +H+N+I ++ +C+ + +++EY G+L +YL YS N +
Sbjct: 72 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 131
Query: 521 IFQRL------NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKL 574
++L + VA +EYL S IH DL NVL+ ++ V ++DF +A+
Sbjct: 132 PEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARD 188
Query: 575 LTGEDQSMTQTQTLGTIGYMAP 596
+ D T + +MAP
Sbjct: 189 IHHIDYYKKTTNGRLPVKWMAP 210
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 68/134 (50%), Gaps = 4/134 (2%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 522
+ ++F E +++ RH N++ + + + A+V ++ SL +L++S ++
Sbjct: 62 QQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQL-AIVTQWCEGSSLYHHLHASETKFEMK 120
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582
+ ++I A ++YLH + +IH DLK +N+ L ++ + DF +A + S
Sbjct: 121 KLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSH 177
Query: 583 TQTQTLGTIGYMAP 596
Q G+I +MAP
Sbjct: 178 QFEQLSGSILWMAP 191
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 67/150 (44%), Gaps = 23/150 (15%)
Query: 464 AFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYS--------- 514
A + F E E++ ++H+++++ C+ +V EYM HG L ++L S
Sbjct: 63 ARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLA 122
Query: 515 -----SNCILDIFQRLNIMIDVASALEY---LHFGYSALVIHCDLKPSNVLLDDNMVAHL 566
+ L + Q L + VA+ + Y LHF +H DL N L+ +V +
Sbjct: 123 GGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHF------VHRDLATRNCLVGQGLVVKI 176
Query: 567 SDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
DF +++ + D +T+ I +M P
Sbjct: 177 GDFGMSRDIYSTDYYRVGGRTMLPIRWMPP 206
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 70/142 (49%), Gaps = 19/142 (13%)
Query: 471 ECEMMKSI-RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL---------YSSNCILD 520
E EMMK I +H+N+I ++ +C+ + +++EY G+L +YL YS N +
Sbjct: 83 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 142
Query: 521 IFQRL------NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKL 574
++L + VA +EYL S IH DL NVL+ ++ V ++DF +A+
Sbjct: 143 PEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARD 199
Query: 575 LTGEDQSMTQTQTLGTIGYMAP 596
+ D T + +MAP
Sbjct: 200 IHHIDYYKKTTNGRLPVKWMAP 221
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 70/142 (49%), Gaps = 19/142 (13%)
Query: 471 ECEMMKSI-RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL---------YSSNCILD 520
E EMMK I +H+N+I ++ +C+ + +++EY G+L +YL YS N +
Sbjct: 83 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHN 142
Query: 521 IFQRL------NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKL 574
++L + VA +EYL S IH DL NVL+ ++ V ++DF +A+
Sbjct: 143 PEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARD 199
Query: 575 LTGEDQSMTQTQTLGTIGYMAP 596
+ D T + +MAP
Sbjct: 200 IHHIDYYKKTTNGRLPVKWMAP 221
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 70/142 (49%), Gaps = 19/142 (13%)
Query: 471 ECEMMKSI-RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL-----------YSSNCI 518
E EMMK I +H+N+I ++ +C+ + +++EY G+L +YL Y N +
Sbjct: 79 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 138
Query: 519 LD---IFQRL-NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKL 574
+ F+ L + +A +EYL S IH DL NVL+ +N V ++DF +A+
Sbjct: 139 PEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARD 195
Query: 575 LTGEDQSMTQTQTLGTIGYMAP 596
+ D T + +MAP
Sbjct: 196 INNIDYYKKTTNGRLPVKWMAP 217
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 69/133 (51%), Gaps = 8/133 (6%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNC-ILDIFQR 524
+SF E ++MK ++H L+++ + S E +V EYM GSL +L L +
Sbjct: 49 ESFLEEAQIMKKLKHDKLVQLYAVVSEEPI-YIVTEYMNKGSLLDFLKDGEGRALKLPNL 107
Query: 525 LNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 584
+++ VA+ + Y+ IH DL+ +N+L+ + ++ ++DF +A+L+ ED T
Sbjct: 108 VDMAAQVAAGMAYIE---RMNYIHRDLRSANILVGNGLICKIADFGLARLI--EDNEXTA 162
Query: 585 TQTLG-TIGYMAP 596
Q I + AP
Sbjct: 163 RQGAKFPIKWTAP 175
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 70/142 (49%), Gaps = 19/142 (13%)
Query: 471 ECEMMKSI-RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL---------YSSNCILD 520
E EMMK I +H+N+I ++ +C+ + +++EY G+L +YL YS N +
Sbjct: 76 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 135
Query: 521 IFQRL------NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKL 574
++L + VA +EYL S IH DL NVL+ ++ V ++DF +A+
Sbjct: 136 PEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARD 192
Query: 575 LTGEDQSMTQTQTLGTIGYMAP 596
+ D T + +MAP
Sbjct: 193 IHHIDYYKKTTNGRLPVKWMAP 214
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 63/121 (52%), Gaps = 3/121 (2%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+ F E +M H N+I + + + ++ EYM +GSL+ +L ++ + Q +
Sbjct: 75 RDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLV 134
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 585
++ + S ++YL +H DL N+L++ N+V +SDF ++++L + ++ T
Sbjct: 135 GMLRGIGSGMKYLS---DMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTT 191
Query: 586 Q 586
+
Sbjct: 192 R 192
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 63/123 (51%), Gaps = 6/123 (4%)
Query: 474 MMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVAS 533
++K+++H L+ + S + VL+Y+ G L +L C L+ R ++AS
Sbjct: 92 LLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARF-YAAEIAS 150
Query: 534 ALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGY 593
AL YLH S +++ DLKP N+LLD L+DF + K + + T + GT Y
Sbjct: 151 ALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCK--ENIEHNSTTSTFCGTPEY 205
Query: 594 MAP 596
+AP
Sbjct: 206 LAP 208
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 70/142 (49%), Gaps = 19/142 (13%)
Query: 471 ECEMMKSI-RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL-----------YSSNCI 518
E EMMK I +H+N+I ++ +C+ + +++EY G+L +YL Y N +
Sbjct: 90 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 519 LD---IFQRL-NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKL 574
+ F+ L + +A +EYL S IH DL NVL+ +N V ++DF +A+
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 575 LTGEDQSMTQTQTLGTIGYMAP 596
+ D T + +MAP
Sbjct: 207 INNIDYYKNTTNGRLPVKWMAP 228
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 70/142 (49%), Gaps = 19/142 (13%)
Query: 471 ECEMMKSI-RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL-----------YSSNCI 518
E EMMK I +H+N+I ++ +C+ + +++EY G+L +YL Y N +
Sbjct: 90 EMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 519 LD---IFQRL-NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKL 574
+ F+ L + +A +EYL S IH DL NVL+ +N V ++DF +A+
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 575 LTGEDQSMTQTQTLGTIGYMAP 596
+ D T + +MAP
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAP 228
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 70/142 (49%), Gaps = 19/142 (13%)
Query: 471 ECEMMKSI-RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL-----------YSSNCI 518
E EMMK I +H+N+I ++ +C+ + +++EY G+L +YL Y N +
Sbjct: 90 EMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 519 LD---IFQRL-NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKL 574
+ F+ L + +A +EYL S IH DL NVL+ +N V ++DF +A+
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 575 LTGEDQSMTQTQTLGTIGYMAP 596
+ D T + +MAP
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAP 228
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 70/142 (49%), Gaps = 19/142 (13%)
Query: 471 ECEMMKSI-RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL-----------YSSNCI 518
E EMMK I +H+N+I ++ +C+ + +++EY G+L +YL Y N +
Sbjct: 82 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 141
Query: 519 LD---IFQRL-NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKL 574
+ F+ L + +A +EYL S IH DL NVL+ +N V ++DF +A+
Sbjct: 142 PEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARD 198
Query: 575 LTGEDQSMTQTQTLGTIGYMAP 596
+ D T + +MAP
Sbjct: 199 INNIDYYKKTTNGRLPVKWMAP 220
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 70/142 (49%), Gaps = 19/142 (13%)
Query: 471 ECEMMKSI-RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL-----------YSSNCI 518
E EMMK I +H+N+I ++ +C+ + +++EY G+L +YL Y N +
Sbjct: 90 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 519 LD---IFQRL-NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKL 574
+ F+ L + +A +EYL S IH DL NVL+ +N V ++DF +A+
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 575 LTGEDQSMTQTQTLGTIGYMAP 596
+ D T + +MAP
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAP 228
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 4/106 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +MK + H N++K+ E+ LV+EY G + YL + + + R
Sbjct: 64 EVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-Q 122
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT 576
+ SA++Y H Y ++H DLK N+LLD +M ++DF + T
Sbjct: 123 IVSAVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFT 165
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 70/142 (49%), Gaps = 19/142 (13%)
Query: 471 ECEMMKSI-RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL-----------YSSNCI 518
E EMMK I +H+N+I ++ +C+ + +++EY G+L +YL Y N +
Sbjct: 136 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 195
Query: 519 LD---IFQRL-NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKL 574
+ F+ L + +A +EYL S IH DL NVL+ +N V ++DF +A+
Sbjct: 196 PEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARD 252
Query: 575 LTGEDQSMTQTQTLGTIGYMAP 596
+ D T + +MAP
Sbjct: 253 INNIDYYKKTTNGRLPVKWMAP 274
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 67/126 (53%), Gaps = 6/126 (4%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++++ + H N+I ++ + ++ +LV ++M LE + ++ +L M+
Sbjct: 62 EIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAYMLM 120
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
LEYLH + ++H DLKP+N+LLD+N V L+DF +AK +++ + T
Sbjct: 121 TLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAY--XHQVVT 175
Query: 591 IGYMAP 596
Y AP
Sbjct: 176 RWYRAP 181
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 67/134 (50%), Gaps = 4/134 (2%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 522
+ ++F E +++ RH N++ + + + A+V ++ SL +L+ ++
Sbjct: 46 QQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMI 104
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582
+ ++I A ++YLH + +IH DLK +N+ L +++ + DF +A + S
Sbjct: 105 KLIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSH 161
Query: 583 TQTQTLGTIGYMAP 596
Q G+I +MAP
Sbjct: 162 QFEQLSGSILWMAP 175
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 70/142 (49%), Gaps = 19/142 (13%)
Query: 471 ECEMMKSI-RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL-----------YSSNCI 518
E EMMK I +H+N+I ++ +C+ + +++EY G+L +YL Y N +
Sbjct: 77 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 136
Query: 519 LD---IFQRL-NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKL 574
+ F+ L + +A +EYL S IH DL NVL+ +N V ++DF +A+
Sbjct: 137 PEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLTARNVLVTENNVMKIADFGLARD 193
Query: 575 LTGEDQSMTQTQTLGTIGYMAP 596
+ D T + +MAP
Sbjct: 194 INNIDYYKKTTNGRLPVKWMAP 215
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 60/126 (47%), Gaps = 8/126 (6%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E E+ + H N++++ + + L+LEY P G L K L S C D + IM +
Sbjct: 73 EIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKS-CTFDEQRTATIMEE 131
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+A AL Y H VIH D+KP N+LL ++DF + S+ + GT
Sbjct: 132 LADALMYCH---GKKVIHRDIKPENLLLGLKGELKIADFG----WSVHAPSLRRKTMCGT 184
Query: 591 IGYMAP 596
+ Y+ P
Sbjct: 185 LDYLPP 190
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 67/134 (50%), Gaps = 4/134 (2%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 522
+ ++F E +++ RH N++ + + + A+V ++ SL +L+ ++
Sbjct: 66 QQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMI 124
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582
+ ++I A ++YLH + +IH DLK +N+ L +++ + DF +A + S
Sbjct: 125 KLIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSH 181
Query: 583 TQTQTLGTIGYMAP 596
Q G+I +MAP
Sbjct: 182 QFEQLSGSILWMAP 195
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 67/134 (50%), Gaps = 4/134 (2%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 522
+ ++F E +++ RH N++ + + + A+V ++ SL +L+ ++
Sbjct: 74 QQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMI 132
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582
+ ++I A ++YLH + +IH DLK +N+ L +++ + DF +A + S
Sbjct: 133 KLIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSH 189
Query: 583 TQTQTLGTIGYMAP 596
Q G+I +MAP
Sbjct: 190 QFEQLSGSILWMAP 203
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 4/133 (3%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 522
+A F E +M S+ H +L++++ C + + LV + MPHG L +Y++ +
Sbjct: 82 KANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQ 140
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582
LN + +A + YL ++H DL NVL+ ++DF +A+LL G+++
Sbjct: 141 LLLNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEY 197
Query: 583 TQTQTLGTIGYMA 595
I +MA
Sbjct: 198 NADGGKMPIKWMA 210
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +MK + H N++K+ E+ LV+EY G + YL + + + R
Sbjct: 56 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFR-Q 114
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT 576
+ SA++Y H ++H DLK N+LLD +M ++DF + T
Sbjct: 115 IVSAVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFT 157
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 71/132 (53%), Gaps = 8/132 (6%)
Query: 467 SFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-LDIFQRL 525
+F E +MK ++H+ L+++ + + E ++ EYM +GSL +L + + I L I + L
Sbjct: 50 AFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLL 108
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 585
++ +A + ++ IH +L+ +N+L+ D + ++DF +A+L+ ED T
Sbjct: 109 DMAAQIAEGMAFIE---ERNYIHRNLRAANILVSDTLSCKIADFGLARLI--EDNEYTAR 163
Query: 586 QTLG-TIGYMAP 596
+ I + AP
Sbjct: 164 EGAKFPIKWTAP 175
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 71/135 (52%), Gaps = 7/135 (5%)
Query: 464 AFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQ 523
+ ++F E +MK+++H L+++ + + EE ++ EYM GSL +L S +
Sbjct: 51 SVQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLP 110
Query: 524 RL-NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582
+L + +A + Y+ IH DL+ +NVL+ ++++ ++DF +A+++ ED
Sbjct: 111 KLIDFSAQIAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVI--EDNEY 165
Query: 583 TQTQTLG-TIGYMAP 596
T + I + AP
Sbjct: 166 TAREGAKFPIKWTAP 180
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSN--EEFKALVLEYMPHGSLEKYLYS-SNCIL 519
R + F+ EC ++ H N++ V+ +C + L+ +MP+GSL L+ +N ++
Sbjct: 49 RKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVV 108
Query: 520 DIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLS 567
D Q + +D+A + +LH L+ L +V++D++M A +S
Sbjct: 109 DQSQAVKFALDMARGMAFLH-TLEPLIPRHALNSRSVMIDEDMTARIS 155
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 7/107 (6%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKAL--VLEYMPHGSLEKYLYSSNCILDIFQRLNIM 528
E ++++++ H ++IK C + +L V+EY+P GSL YL + + + Q L
Sbjct: 83 EIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS--IGLAQLLLFA 140
Query: 529 IDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLL 575
+ + YLH + IH DL NVLLD++ + + DF +AK +
Sbjct: 141 QQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAV 184
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 83/188 (44%), Gaps = 43/188 (22%)
Query: 443 ATDEFSENNLIGRGGFAL----------------------------FIRAFKSFDVECEM 474
A +E IG+GGF L I F+ F E +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 475 MKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASA 534
M ++ H N++K+ N +V+E++P G L L + +L +M+D+A
Sbjct: 77 MSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG 134
Query: 535 LEYLHFGYSALVIHCDLKPSNVL---LDDN--MVAHLSDFSIAKLLTGEDQSM-TQTQTL 588
+EY+ + ++H DL+ N+ LD+N + A ++DFS+++ QS+ + + L
Sbjct: 135 IEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ------QSVHSVSGLL 187
Query: 589 GTIGYMAP 596
G +MAP
Sbjct: 188 GNFQWMAP 195
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 59/107 (55%), Gaps = 7/107 (6%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKAL--VLEYMPHGSLEKYLYSSNCILDIFQRLNIM 528
E ++++++ H ++IK C ++ K+L V+EY+P GSL YL + + + Q L
Sbjct: 66 EIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS--IGLAQLLLFA 123
Query: 529 IDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLL 575
+ + YLH + IH +L NVLLD++ + + DF +AK +
Sbjct: 124 QQICEGMAYLH---AQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAV 167
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 63/121 (52%), Gaps = 3/121 (2%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+ F E +M H N+I + + + ++ EYM +GSL+ +L ++ + Q +
Sbjct: 54 RDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLV 113
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 585
++ + S ++YL +H DL N+L++ N+V +SDF ++++L + ++ T
Sbjct: 114 GMLRGIGSGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTT 170
Query: 586 Q 586
+
Sbjct: 171 R 171
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 12/137 (8%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNC---ILDIF 522
+ + E E++KS+ H N+IK+ + +V+E G L + + S+ L
Sbjct: 65 EQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEG 124
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDD---NMVAHLSDFSIAKLLTGED 579
+M + +AL Y H S V+H DLKP N+L D + + DF +A+L ++
Sbjct: 125 YVAELMKQMMNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE 181
Query: 580 QSMTQTQTLGTIGYMAP 596
S T GT YMAP
Sbjct: 182 HS---TNAAGTALYMAP 195
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +MK + H N++K+ E+ LV+EY G + YL + + + R
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-Q 121
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT 576
+ SA++Y H ++H DLK N+LLD +M ++DF + T
Sbjct: 122 IVSAVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFT 164
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 68/129 (52%), Gaps = 8/129 (6%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSS-NCILDIFQRLNIMI 529
E + K ++H+N+++ + S S F + +E +P GSL L S + D Q +
Sbjct: 55 EIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYT 114
Query: 530 -DVASALEYLHFGYSALVIHCDLKPSNVLLDD-NMVAHLSDFSIAKLLTGEDQSMTQTQT 587
+ L+YLH ++H D+K NVL++ + V +SDF +K L G + T+T T
Sbjct: 115 KQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN-PCTETFT 170
Query: 588 LGTIGYMAP 596
GT+ YMAP
Sbjct: 171 -GTLQYMAP 178
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 63/121 (52%), Gaps = 3/121 (2%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+ F E +M H N+I + + + ++ EYM +GSL+ +L ++ + Q +
Sbjct: 60 RDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLV 119
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 585
++ + S ++YL +H DL N+L++ N+V +SDF ++++L + ++ T
Sbjct: 120 GMLRGIGSGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTT 176
Query: 586 Q 586
+
Sbjct: 177 R 177
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +MK + H N++K+ E+ LV+EY G + YL + + + R
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-Q 121
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT 576
+ SA++Y H ++H DLK N+LLD +M ++DF + T
Sbjct: 122 IVSAVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFT 164
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +MK + H N++K+ E+ LV+EY G + YL + + + R
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-Q 121
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT 576
+ SA++Y H ++H DLK N+LLD +M ++DF + T
Sbjct: 122 IVSAVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFT 164
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +MK + H N++K+ E+ LV+EY G + YL + + + R
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-Q 121
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT 576
+ SA++Y H ++H DLK N+LLD +M ++DF + T
Sbjct: 122 IVSAVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFT 164
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +MK + H N++K+ E+ LV+EY G + YL + + + R
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-Q 121
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT 576
+ SA++Y H ++H DLK N+LLD +M ++DF + T
Sbjct: 122 IVSAVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFT 164
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 66/135 (48%), Gaps = 8/135 (5%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+ F E +M H N+I + + ++ E+M +GSL+ +L ++ + Q +
Sbjct: 53 RDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLV 112
Query: 526 NIMIDVASALEYL-HFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 584
++ +A+ ++YL Y +H L N+L++ N+V +SDF +++ L + T
Sbjct: 113 GMLRGIAAGMKYLADMNY----VHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTY 168
Query: 585 TQTLG---TIGYMAP 596
T LG I + AP
Sbjct: 169 TSALGGKIPIRWTAP 183
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 70/146 (47%), Gaps = 22/146 (15%)
Query: 466 KSFDVECEMMKSIRHR-NLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI------ 518
+ F E E++ + H N+I ++ +C + + L +EY PHG+L +L S +
Sbjct: 67 RDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAF 126
Query: 519 ---------LDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDF 569
L Q L+ DVA ++YL IH +L N+L+ +N VA ++DF
Sbjct: 127 AIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRNLAARNILVGENYVAKIADF 183
Query: 570 SIAKLLTGEDQSMTQTQTLGTIGYMA 595
+++ G++ + +T + +MA
Sbjct: 184 GLSR---GQEVYVKKTMGRLPVRWMA 206
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 19/142 (13%)
Query: 471 ECEMMKSI-RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL---------YSSNCILD 520
E EMMK I +H+N+I ++ +C+ + +++EY G+L +YL +S N +
Sbjct: 83 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHN 142
Query: 521 IFQRL------NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKL 574
++L + VA +EYL S IH DL NVL+ ++ V ++DF +A+
Sbjct: 143 PEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARD 199
Query: 575 LTGEDQSMTQTQTLGTIGYMAP 596
+ D T + +MAP
Sbjct: 200 IHHIDXXKKTTNGRLPVKWMAP 221
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 4/133 (3%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 522
+A F E +M S+ H +L++++ C + + LV + MPHG L +Y++ +
Sbjct: 59 KANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQ 117
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582
LN + +A + YL ++H DL NVL+ ++DF +A+LL G+++
Sbjct: 118 LLLNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEY 174
Query: 583 TQTQTLGTIGYMA 595
I +MA
Sbjct: 175 NADGGKMPIKWMA 187
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 68/129 (52%), Gaps = 8/129 (6%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSS-NCILDIFQRLNIMI 529
E + K ++H+N+++ + S S F + +E +P GSL L S + D Q +
Sbjct: 69 EIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYT 128
Query: 530 -DVASALEYLHFGYSALVIHCDLKPSNVLLDD-NMVAHLSDFSIAKLLTGEDQSMTQTQT 587
+ L+YLH ++H D+K NVL++ + V +SDF +K L G + T+T T
Sbjct: 129 KQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN-PCTETFT 184
Query: 588 LGTIGYMAP 596
GT+ YMAP
Sbjct: 185 -GTLQYMAP 192
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 78/187 (41%), Gaps = 41/187 (21%)
Query: 443 ATDEFSENNLIGRGGFAL----------------------------FIRAFKSFDVECEM 474
A +E IG+GGF L I F+ F E +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 475 MKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASA 534
M ++ H N++K+ N +V+E++P G L L + +L +M+D+A
Sbjct: 77 MSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG 134
Query: 535 LEYLHFGYSALVIHCDLKPSNVL---LDDN--MVAHLSDFSIAKLLTGEDQSMTQTQTLG 589
+EY+ + ++H DL+ N+ LD+N + A ++DF T + + + LG
Sbjct: 135 IEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG-----TSQQSVHSVSGLLG 188
Query: 590 TIGYMAP 596
+MAP
Sbjct: 189 NFQWMAP 195
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 61/126 (48%), Gaps = 8/126 (6%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSRFDEQRTATYITE 120
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+A+AL Y H S VIH D+KP N+LL N ++DF + S +T GT
Sbjct: 121 LANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFG----WSVHAPSSRRTTLCGT 173
Query: 591 IGYMAP 596
+ Y+ P
Sbjct: 174 LDYLPP 179
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 54/107 (50%), Gaps = 3/107 (2%)
Query: 467 SFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLN 526
F E ++K H N++++I C+ ++ +V+E + G +L + L + L
Sbjct: 158 KFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQ 217
Query: 527 IMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAK 573
++ D A+ +EYL S IH DL N L+ + V +SDF +++
Sbjct: 218 MVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSR 261
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 54/107 (50%), Gaps = 3/107 (2%)
Query: 467 SFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLN 526
F E ++K H N++++I C+ ++ +V+E + G +L + L + L
Sbjct: 158 KFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQ 217
Query: 527 IMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAK 573
++ D A+ +EYL S IH DL N L+ + V +SDF +++
Sbjct: 218 MVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSR 261
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 61/127 (48%), Gaps = 8/127 (6%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKY-LYSSNCILDIFQRLNIMI 529
E +++K +RH NL+ ++ C ++ LV E++ H L+ L+ + + Q+ I
Sbjct: 74 EIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQI 133
Query: 530 DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLG 589
+ + F +S +IH D+KP N+L+ + V L DF A+ L + +
Sbjct: 134 -----INGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE--VYDDEVA 186
Query: 590 TIGYMAP 596
T Y AP
Sbjct: 187 TRWYRAP 193
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 69/142 (48%), Gaps = 19/142 (13%)
Query: 471 ECEMMKSI-RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL---------YSSNCILD 520
E EMMK I +H+N+I ++ +C+ + +++EY G+L +YL Y N +
Sbjct: 68 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHN 127
Query: 521 IFQRL------NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKL 574
++L + VA +EYL S IH DL NVL+ ++ V ++DF +A+
Sbjct: 128 PEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARD 184
Query: 575 LTGEDQSMTQTQTLGTIGYMAP 596
+ D T + +MAP
Sbjct: 185 IHHIDYYKKTTNGRLPVKWMAP 206
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 66/122 (54%), Gaps = 6/122 (4%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
++F E +MK+++H L+++ + + EE ++ E+M GSL +L S + +L
Sbjct: 52 QAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKL 111
Query: 526 -NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 584
+ +A + Y+ IH DL+ +NVL+ ++++ ++DF +A+++ ED T
Sbjct: 112 IDFSAQIAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVI--EDNEYTA 166
Query: 585 TQ 586
+
Sbjct: 167 RE 168
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 69/142 (48%), Gaps = 19/142 (13%)
Query: 471 ECEMMKSI-RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL---------YSSNCILD 520
E EMMK I +H+N+I ++ +C+ + +++EY G+L +YL Y N +
Sbjct: 83 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHN 142
Query: 521 IFQRL------NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKL 574
++L + VA +EYL S IH DL NVL+ ++ V ++DF +A+
Sbjct: 143 PEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARD 199
Query: 575 LTGEDQSMTQTQTLGTIGYMAP 596
+ D T + +MAP
Sbjct: 200 IHHIDYYKKTTNGRLPVKWMAP 221
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 82/188 (43%), Gaps = 43/188 (22%)
Query: 443 ATDEFSENNLIGRGGFAL----------------------------FIRAFKSFDVECEM 474
A +E IG+GGF L I F+ F E +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 475 MKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASA 534
M ++ H N++K+ N +V+E++P G L L + +L +M+D+A
Sbjct: 77 MSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG 134
Query: 535 LEYLHFGYSALVIHCDLKPSNVL---LDDN--MVAHLSDFSIAKLLTGEDQSM-TQTQTL 588
+EY+ + ++H DL+ N+ LD+N + A ++DF +++ QS+ + + L
Sbjct: 135 IEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ------QSVHSVSGLL 187
Query: 589 GTIGYMAP 596
G +MAP
Sbjct: 188 GNFQWMAP 195
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 67/165 (40%), Gaps = 36/165 (21%)
Query: 442 RATDEFSENNLIGRGGFALFIRAFKSFDVECEMMKSIRH--------------------- 480
R +F E ++G+G F ++A + D +K IRH
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQ 62
Query: 481 ------------RNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIM 528
RN +K +++ + + +EY + +L ++S N + +
Sbjct: 63 YVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLF 122
Query: 529 IDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAK 573
+ AL Y+H S +IH DLKP N+ +D++ + DF +AK
Sbjct: 123 RQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAK 164
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 69/142 (48%), Gaps = 19/142 (13%)
Query: 471 ECEMMKSI-RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL-----------YSSNCI 518
E EMMK I +H+N+I ++ +C+ + +++ Y G+L +YL Y N +
Sbjct: 90 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 519 LD---IFQRL-NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKL 574
+ F+ L + +A +EYL S IH DL NVL+ +N V ++DF +A+
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 575 LTGEDQSMTQTQTLGTIGYMAP 596
+ D T + +MAP
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAP 228
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 14/130 (10%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQR---LNI 527
E M+K ++H NL+ ++ + LV EY H L + LD +QR ++
Sbjct: 52 EIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHE--------LDRYQRGVPEHL 103
Query: 528 MIDVA-SALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQ 586
+ + L+ ++F + IH D+KP N+L+ + V L DF A+LLTG S
Sbjct: 104 VKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGP--SDYYDD 161
Query: 587 TLGTIGYMAP 596
+ T Y +P
Sbjct: 162 EVATRWYRSP 171
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 51/111 (45%), Gaps = 14/111 (12%)
Query: 498 LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF------GYSALVIHCDL 551
LV+EY P+GSL KYL S D + V L YLH Y + H DL
Sbjct: 89 LVMEYYPNGSLXKYL--SLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDL 146
Query: 552 KPSNVLLDDNMVAHLSDFSIAKLLTGE------DQSMTQTQTLGTIGYMAP 596
NVL+ ++ +SDF ++ LTG ++ +GTI YMAP
Sbjct: 147 NSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAP 197
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 8/126 (6%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E E+ +RH N++++ + L+LEY P G + K L D + + +
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL-QKLSKFDEQRTATYITE 121
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+A+AL Y H S VIH D+KP N+LL ++DF + S +T GT
Sbjct: 122 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGT 174
Query: 591 IGYMAP 596
+ Y+ P
Sbjct: 175 LDYLPP 180
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 69/142 (48%), Gaps = 19/142 (13%)
Query: 471 ECEMMKSI-RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL-----------YSSNCI 518
E EMMK I +H+N+I ++ +C+ + +++ Y G+L +YL Y N +
Sbjct: 90 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 519 LD---IFQRL-NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKL 574
+ F+ L + +A +EYL S IH DL NVL+ +N V ++DF +A+
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 575 LTGEDQSMTQTQTLGTIGYMAP 596
+ D T + +MAP
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAP 228
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 61/126 (48%), Gaps = 8/126 (6%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 116
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+A+AL Y H S VIH D+KP N+LL ++DF + S +T+ GT
Sbjct: 117 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTELCGT 169
Query: 591 IGYMAP 596
+ Y+ P
Sbjct: 170 LDYLPP 175
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 76/175 (43%), Gaps = 35/175 (20%)
Query: 447 FSENNLIGRGGFALFIRAFKSFDVECEMMKSIRHRNL-------------IKVISSCSNE 493
F++ IG+G F FK D + + +I+ +L I V+S C +
Sbjct: 25 FTKLERIGKGSFG---EVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSS 81
Query: 494 EFKA------------LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG 541
+++EY+ GS L + D FQ ++ ++ L+YLH
Sbjct: 82 YVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGP--FDEFQIATMLKEILKGLDYLH-- 137
Query: 542 YSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
S IH D+K +NVLL + L+DF +A LT D + + +GT +MAP
Sbjct: 138 -SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLT--DTQIKRNTFVGTPFWMAP 189
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 8/126 (6%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +K +RH ++IK+ + +V+EY G L Y+ + + R
Sbjct: 59 EISYLKLLRHPHIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGR-RFFQQ 116
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ A+EY H ++H DLKP N+LLDDN+ ++DF ++ ++T D + +T + G+
Sbjct: 117 IICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMT--DGNFLKT-SCGS 170
Query: 591 IGYMAP 596
Y AP
Sbjct: 171 PNYAAP 176
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +MK + H N++K+ E+ L++EY G + YL + + + R
Sbjct: 61 EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-Q 119
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT 576
+ SA++Y H ++H DLK N+LLD +M ++DF + T
Sbjct: 120 IVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFT 162
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 8/126 (6%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E E+ +RH N++++ + + + L+LE+ P G L K L + D + M +
Sbjct: 65 EIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL-QKHGRFDEQRSATFMEE 123
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+A AL Y H VIH D+KP N+L+ ++DF + S+ + GT
Sbjct: 124 LADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGT 176
Query: 591 IGYMAP 596
+ Y+ P
Sbjct: 177 LDYLPP 182
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 63/129 (48%), Gaps = 12/129 (9%)
Query: 471 ECEMMKSIR-HRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQR--LNI 527
E ++++ + H N+I++ + F LV + M G L YL + + R +
Sbjct: 60 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA 119
Query: 528 MIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQT 587
+++V AL L+ ++H DLKP N+LLDD+M L+DF + L D +
Sbjct: 120 LLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQL---DPGEKLREV 170
Query: 588 LGTIGYMAP 596
GT Y+AP
Sbjct: 171 CGTPSYLAP 179
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 8/126 (6%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E E+ +RH N++++ + + + L+LE+ P G L K L + D + M +
Sbjct: 64 EIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL-QKHGRFDEQRSATFMEE 122
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+A AL Y H VIH D+KP N+L+ ++DF + S+ + GT
Sbjct: 123 LADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGT 175
Query: 591 IGYMAP 596
+ Y+ P
Sbjct: 176 LDYLPP 181
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +MK + H N++K+ E+ L++EY G + YL + + + R
Sbjct: 64 EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-Q 122
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT 576
+ SA++Y H ++H DLK N+LLD +M ++DF + T
Sbjct: 123 IVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFT 165
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 8/126 (6%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E E+ +RH N++++ + + + L+LE+ P G L K L + D + M +
Sbjct: 64 EIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL-QKHGRFDEQRSATFMEE 122
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+A AL Y H VIH D+KP N+L+ ++DF + S+ + GT
Sbjct: 123 LADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGT 175
Query: 591 IGYMAP 596
+ Y+ P
Sbjct: 176 LDYLPP 181
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 63/129 (48%), Gaps = 12/129 (9%)
Query: 471 ECEMMKSIR-HRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQR--LNI 527
E ++++ + H N+I++ + F LV + M G L YL + + R +
Sbjct: 73 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA 132
Query: 528 MIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQT 587
+++V AL L+ ++H DLKP N+LLDD+M L+DF + L D +
Sbjct: 133 LLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQL---DPGEKLREV 183
Query: 588 LGTIGYMAP 596
GT Y+AP
Sbjct: 184 CGTPSYLAP 192
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 8/126 (6%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSRFDEQRTATYITE 120
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+A+AL Y H S VIH D+KP N+LL N ++DF + S + GT
Sbjct: 121 LANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFG----WSVHAPSSRRDTLCGT 173
Query: 591 IGYMAP 596
+ Y+ P
Sbjct: 174 LDYLPP 179
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 8/126 (6%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 116
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+A+AL Y H S VIH D+KP N+LL ++DF + S +T GT
Sbjct: 117 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTXLCGT 169
Query: 591 IGYMAP 596
+ Y+ P
Sbjct: 170 LDYLPP 175
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 8/126 (6%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 120
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+A+AL Y H S VIH D+KP N+LL ++DF + S +T GT
Sbjct: 121 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGT 173
Query: 591 IGYMAP 596
+ Y+ P
Sbjct: 174 LDYLPP 179
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 8/126 (6%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 116
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+A+AL Y H S VIH D+KP N+LL ++DF + S +T GT
Sbjct: 117 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGT 169
Query: 591 IGYMAP 596
+ Y+ P
Sbjct: 170 LDYLPP 175
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 81/198 (40%), Gaps = 51/198 (25%)
Query: 435 FSYLELC-RATDEFSENNLIGRGGFALFIRAFKS-----------------------FDV 470
F + C R TD++ +G+G F++ R K +
Sbjct: 20 FQXMATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLER 79
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL-----EKYLYS----SNCILDI 521
E + + ++H N++++ S S E F LV + + G L + YS S+CI I
Sbjct: 80 EARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQI 139
Query: 522 FQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDN---MVAHLSDFSIAKLLTGE 578
+ +N + + ++H DLKP N+LL L+DF +A + GE
Sbjct: 140 LESVNHI-------------HQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGE 186
Query: 579 DQSMTQTQTLGTIGYMAP 596
Q+ GT GY++P
Sbjct: 187 QQAW--FGFAGTPGYLSP 202
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 8/126 (6%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 57 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 115
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+A+AL Y H S VIH D+KP N+LL ++DF + S +T GT
Sbjct: 116 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGT 168
Query: 591 IGYMAP 596
+ Y+ P
Sbjct: 169 LDYLPP 174
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 61/126 (48%), Gaps = 8/126 (6%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E E+ +RH N++++ + L+LEY P G++ + L + D + + +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITE 116
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+A+AL Y H S VIH D+KP N+LL ++DF + S +T GT
Sbjct: 117 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGT 169
Query: 591 IGYMAP 596
+ Y+ P
Sbjct: 170 LDYLPP 175
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 8/126 (6%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 59 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 117
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+A+AL Y H S VIH D+KP N+LL ++DF + S +T GT
Sbjct: 118 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGT 170
Query: 591 IGYMAP 596
+ Y+ P
Sbjct: 171 LDYLPP 176
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 8/126 (6%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 121
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+A+AL Y H S VIH D+KP N+LL ++DF + S +T GT
Sbjct: 122 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGT 174
Query: 591 IGYMAP 596
+ Y+ P
Sbjct: 175 LDYLPP 180
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 8/126 (6%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 121
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+A+AL Y H S VIH D+KP N+LL ++DF + S +T GT
Sbjct: 122 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGT 174
Query: 591 IGYMAP 596
+ Y+ P
Sbjct: 175 LDYLPP 180
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 64/128 (50%), Gaps = 9/128 (7%)
Query: 471 ECEMMKSIRHRNLIKVISSCS--NEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIM 528
E ++K + H N++K++ NE+ +V E + G + + D Q
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSED--QARFYF 143
Query: 529 IDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTL 588
D+ +EYLH+ +IH D+KPSN+L+ ++ ++DF ++ G D + + T+
Sbjct: 144 QDLIKGIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALL--SNTV 198
Query: 589 GTIGYMAP 596
GT +MAP
Sbjct: 199 GTPAFMAP 206
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 65/147 (44%), Gaps = 20/147 (13%)
Query: 462 IRAFKSFDVECEMMKSIRHRNLIKVISSCSNEE--------FK----ALVLEYMPHGSLE 509
I A K VE ++ + I+ I ++ C + FK +V+EY GS+
Sbjct: 56 IVAIKQVPVESDLQEIIKE---ISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVS 112
Query: 510 KYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDF 569
+ N L + I+ LEYLHF IH D+K N+LL+ A L+DF
Sbjct: 113 DIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK---IHRDIKAGNILLNTEGHAKLADF 169
Query: 570 SIAKLLTGEDQSMTQTQTLGTIGYMAP 596
+A LT D + +GT +MAP
Sbjct: 170 GVAGQLT--DXMAKRNXVIGTPFWMAP 194
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 61/126 (48%), Gaps = 8/126 (6%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E E+ +RH N++++ + L+LEY P G++ + L + D + + +
Sbjct: 84 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITE 142
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+A+AL Y H S VIH D+KP N+LL ++DF + S +T GT
Sbjct: 143 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGT 195
Query: 591 IGYMAP 596
+ Y+ P
Sbjct: 196 LDYLPP 201
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 8/126 (6%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 55 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 113
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+A+AL Y H S VIH D+KP N+LL ++DF + S +T GT
Sbjct: 114 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGT 166
Query: 591 IGYMAP 596
+ Y+ P
Sbjct: 167 LDYLPP 172
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 8/126 (6%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E E+ +RH N++++ + L+LEY P G + K L D + + +
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL-QKLSKFDEQRTATYITE 121
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+A+AL Y H S VIH D+KP N+LL ++DF + S + GT
Sbjct: 122 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLXGT 174
Query: 591 IGYMAP 596
+ Y+ P
Sbjct: 175 LDYLPP 180
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 61/126 (48%), Gaps = 8/126 (6%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E E+ +RH N++++ + L+LEY P G++ + L + D + + +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITE 116
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+A+AL Y H S VIH D+KP N+LL ++DF + S +T GT
Sbjct: 117 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGT 169
Query: 591 IGYMAP 596
+ Y+ P
Sbjct: 170 LDYLPP 175
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 72/138 (52%), Gaps = 25/138 (18%)
Query: 469 DVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL------EKYLYSSNCILDIF 522
+ E E++K + H +IK+ + E++ +VLE M G L K L + C L +
Sbjct: 202 ETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFY 260
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLL---DDNMVAHLSDFSIAKLLTGED 579
Q L A++YLH +IH DLKP NVLL +++ + ++DF +K+L GE
Sbjct: 261 QML-------LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GET 309
Query: 580 QSMTQTQTL-GTIGYMAP 596
M +TL GT Y+AP
Sbjct: 310 SLM---RTLCGTPTYLAP 324
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 8/126 (6%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 59 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 117
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+A+AL Y H S VIH D+KP N+LL ++DF + S +T GT
Sbjct: 118 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSCHAPSSRRTTLSGT 170
Query: 591 IGYMAP 596
+ Y+ P
Sbjct: 171 LDYLPP 176
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 61/126 (48%), Gaps = 8/126 (6%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E E+ +RH N++++ + L+LEY P G++ + L + D + + +
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITE 121
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+A+AL Y H S VIH D+KP N+LL ++DF + S +T GT
Sbjct: 122 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGT 174
Query: 591 IGYMAP 596
+ Y+ P
Sbjct: 175 LDYLPP 180
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 72/138 (52%), Gaps = 25/138 (18%)
Query: 469 DVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL------EKYLYSSNCILDIF 522
+ E E++K + H +IK+ + E++ +VLE M G L K L + C L +
Sbjct: 188 ETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFY 246
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLL---DDNMVAHLSDFSIAKLLTGED 579
Q L A++YLH +IH DLKP NVLL +++ + ++DF +K+L GE
Sbjct: 247 QML-------LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GET 295
Query: 580 QSMTQTQTL-GTIGYMAP 596
M +TL GT Y+AP
Sbjct: 296 SLM---RTLCGTPTYLAP 310
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 8/126 (6%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 119
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+A+AL Y H S VIH D+KP N+LL ++DF + S +T GT
Sbjct: 120 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGT 172
Query: 591 IGYMAP 596
+ Y+ P
Sbjct: 173 LDYLPP 178
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 61/126 (48%), Gaps = 8/126 (6%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E E+ +RH N++++ + L+LEY P G++ + L + D + + +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITE 119
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+A+AL Y H S VIH D+KP N+LL ++DF + S +T GT
Sbjct: 120 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGT 172
Query: 591 IGYMAP 596
+ Y+ P
Sbjct: 173 LDYLPP 178
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 61/126 (48%), Gaps = 8/126 (6%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E E+ +RH N++++ + L+LEY P G++ + L + D + + +
Sbjct: 75 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITE 133
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+A+AL Y H S VIH D+KP N+LL ++DF + S +T GT
Sbjct: 134 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGT 186
Query: 591 IGYMAP 596
+ Y+ P
Sbjct: 187 LDYLPP 192
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 79/185 (42%), Gaps = 35/185 (18%)
Query: 437 YLELCRATDEFSENNLIGRGGFALFIRAFKSFDVECEMMKSIRHRNL------------- 483
Y + + F++ IG+G F FK D + + +I+ +L
Sbjct: 19 YFQSMDPEELFTKLEKIGKGSFG---EVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQE 75
Query: 484 IKVISSCSNEEFKA------------LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDV 531
I V+S C + +++EY+ GS L LD Q I+ ++
Sbjct: 76 ITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREI 133
Query: 532 ASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTI 591
L+YLH S IH D+K +NVLL ++ L+DF +A LT D + + +GT
Sbjct: 134 LKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNTFVGTP 188
Query: 592 GYMAP 596
+MAP
Sbjct: 189 FWMAP 193
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 70/133 (52%), Gaps = 8/133 (6%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
++F E +MK+++H L+K+ + + E ++ E+M GSL +L S Q L
Sbjct: 55 EAFLAEANVMKTLQHDKLVKLHAVVTKEPI-YIITEFMAKGSLLDFLKSDEGSK---QPL 110
Query: 526 NIMIDVASAL-EYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 584
+ID ++ + E + F IH DL+ +N+L+ ++V ++DF +A+++ ED T
Sbjct: 111 PKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVI--EDNEYTA 168
Query: 585 TQTLG-TIGYMAP 596
+ I + AP
Sbjct: 169 REGAKFPIKWTAP 181
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 72/138 (52%), Gaps = 25/138 (18%)
Query: 469 DVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL------EKYLYSSNCILDIF 522
+ E E++K + H +IK+ + E++ +VLE M G L K L + C L +
Sbjct: 69 ETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFY 127
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLL---DDNMVAHLSDFSIAKLLTGED 579
Q L A++YLH +IH DLKP NVLL +++ + ++DF +K+L GE
Sbjct: 128 QML-------LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GET 176
Query: 580 QSMTQTQTL-GTIGYMAP 596
M +TL GT Y+AP
Sbjct: 177 SLM---RTLCGTPTYLAP 191
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 64/133 (48%), Gaps = 4/133 (3%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 522
++F++ + S+ H ++++++ C + LV +Y+P GSL ++ L
Sbjct: 75 QSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALGPQ 133
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582
LN + +A + YL ++H +L NVLL ++DF +A LL +D+ +
Sbjct: 134 LLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQL 190
Query: 583 TQTQTLGTIGYMA 595
++ I +MA
Sbjct: 191 LYSEAKTPIKWMA 203
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 72/138 (52%), Gaps = 25/138 (18%)
Query: 469 DVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL------EKYLYSSNCILDIF 522
+ E E++K + H +IK+ + E++ +VLE M G L K L + C L +
Sbjct: 62 ETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFY 120
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLL---DDNMVAHLSDFSIAKLLTGED 579
Q L A++YLH +IH DLKP NVLL +++ + ++DF +K+L GE
Sbjct: 121 QML-------LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GET 169
Query: 580 QSMTQTQTL-GTIGYMAP 596
M +TL GT Y+AP
Sbjct: 170 SLM---RTLCGTPTYLAP 184
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 72/138 (52%), Gaps = 25/138 (18%)
Query: 469 DVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL------EKYLYSSNCILDIF 522
+ E E++K + H +IK+ + E++ +VLE M G L K L + C L +
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLL---DDNMVAHLSDFSIAKLLTGED 579
Q L A++YLH +IH DLKP NVLL +++ + ++DF +K+L GE
Sbjct: 122 QML-------LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GET 170
Query: 580 QSMTQTQTL-GTIGYMAP 596
M +TL GT Y+AP
Sbjct: 171 SLM---RTLCGTPTYLAP 185
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 72/138 (52%), Gaps = 25/138 (18%)
Query: 469 DVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL------EKYLYSSNCILDIF 522
+ E E++K + H +IK+ + E++ +VLE M G L K L + C L +
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLL---DDNMVAHLSDFSIAKLLTGED 579
Q L A++YLH +IH DLKP NVLL +++ + ++DF +K+L GE
Sbjct: 122 QML-------LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GET 170
Query: 580 QSMTQTQTL-GTIGYMAP 596
M +TL GT Y+AP
Sbjct: 171 SLM---RTLCGTPTYLAP 185
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 68/150 (45%), Gaps = 21/150 (14%)
Query: 463 RAFKSFDVECEMMKSI--RHRNLIKVISSCSNEEFKA----LVLEYMPHGSLEKYLYSSN 516
R KS+ E E+ ++ RH N++ I+S + L+ Y GSL YL +
Sbjct: 71 RDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT 130
Query: 517 CILDIFQRLNIMIDVASALEYLH---FGYSA--LVIHCDLKPSNVLLDDNMVAHLSDFSI 571
LD L I++ +AS L +LH FG + H DLK N+L+ N ++D +
Sbjct: 131 --LDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGL 188
Query: 572 AKLLTGEDQSMTQTQT-----LGTIGYMAP 596
A + QS Q +GT YMAP
Sbjct: 189 AVM---HSQSTNQLDVGNNPRVGTKRYMAP 215
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 64/133 (48%), Gaps = 4/133 (3%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 522
++F++ + S+ H ++++++ C + LV +Y+P GSL ++ L
Sbjct: 57 QSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALGPQ 115
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582
LN + +A + YL ++H +L NVLL ++DF +A LL +D+ +
Sbjct: 116 LLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQL 172
Query: 583 TQTQTLGTIGYMA 595
++ I +MA
Sbjct: 173 LYSEAKTPIKWMA 185
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 72/138 (52%), Gaps = 25/138 (18%)
Query: 469 DVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL------EKYLYSSNCILDIF 522
+ E E++K + H +IK+ + E++ +VLE M G L K L + C L +
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLL---DDNMVAHLSDFSIAKLLTGED 579
Q L A++YLH +IH DLKP NVLL +++ + ++DF +K+L GE
Sbjct: 122 QML-------LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GET 170
Query: 580 QSMTQTQTL-GTIGYMAP 596
M +TL GT Y+AP
Sbjct: 171 SLM---RTLCGTPTYLAP 185
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 12/129 (9%)
Query: 471 ECEMMKSIR-HRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQR--LNI 527
E ++++ + H N+I++ + F LV + M G L YL + + R +
Sbjct: 73 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA 132
Query: 528 MIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQT 587
+++V AL L+ ++H DLKP N+LLDD+M L+DF + L D
Sbjct: 133 LLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQL---DPGEKLRSV 183
Query: 588 LGTIGYMAP 596
GT Y+AP
Sbjct: 184 CGTPSYLAP 192
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 71/135 (52%), Gaps = 8/135 (5%)
Query: 464 AFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQ 523
+ ++F E +MK+++H L+K+ + + E ++ E+M GSL +L S Q
Sbjct: 226 SVEAFLAEANVMKTLQHDKLVKLHAVVTKEPI-YIITEFMAKGSLLDFLKSDEGSK---Q 281
Query: 524 RLNIMIDVASAL-EYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582
L +ID ++ + E + F IH DL+ +N+L+ ++V ++DF +A+++ ED
Sbjct: 282 PLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVI--EDNEY 339
Query: 583 TQTQTLG-TIGYMAP 596
T + I + AP
Sbjct: 340 TAREGAKFPIKWTAP 354
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 14/133 (10%)
Query: 470 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 529
VE +++ + R ++ + + + LV+ M G + ++Y+ + FQ +
Sbjct: 234 VEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF 293
Query: 530 ---DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQ 586
+ S LE+LH +I+ DLKP NVLLDD+ +SD +A L QT+
Sbjct: 294 YTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA-----GQTK 345
Query: 587 T---LGTIGYMAP 596
T GT G+MAP
Sbjct: 346 TKGYAGTPGFMAP 358
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 14/133 (10%)
Query: 470 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 529
VE +++ + R ++ + + + LV+ M G + ++Y+ + FQ +
Sbjct: 234 VEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF 293
Query: 530 ---DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQ 586
+ S LE+LH +I+ DLKP NVLLDD+ +SD +A L QT+
Sbjct: 294 YTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA-----GQTK 345
Query: 587 T---LGTIGYMAP 596
T GT G+MAP
Sbjct: 346 TKGYAGTPGFMAP 358
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 14/133 (10%)
Query: 470 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 529
VE +++ + R ++ + + + LV+ M G + ++Y+ + FQ +
Sbjct: 234 VEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF 293
Query: 530 ---DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQ 586
+ S LE+LH +I+ DLKP NVLLDD+ +SD +A L QT+
Sbjct: 294 YTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA-----GQTK 345
Query: 587 T---LGTIGYMAP 596
T GT G+MAP
Sbjct: 346 TKGYAGTPGFMAP 358
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 498 LVLEYMPHGSLEKYLYSSNC-ILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNV 556
+ +E+ G+LE+++ LD L + + ++Y+H S +IH DLKPSN+
Sbjct: 111 IQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNI 167
Query: 557 LLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
L D + DF + L + + +T++ GT+ YM+P
Sbjct: 168 FLVDTKQVKIGDFGLVTSLKNDGK---RTRSKGTLRYMSP 204
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 76/175 (43%), Gaps = 35/175 (20%)
Query: 447 FSENNLIGRGGFALFIRAFKSFDVECEMMKSIRHRNL-------------IKVISSCSNE 493
F++ IG+G F FK D + + +I+ +L I V+S C +
Sbjct: 9 FTKLEKIGKGSFG---EVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 65
Query: 494 EFKA------------LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG 541
+++EY+ GS L LD Q I+ ++ L+YLH
Sbjct: 66 YVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLH-- 121
Query: 542 YSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
S IH D+K +NVLL ++ L+DF +A LT D + + +GT +MAP
Sbjct: 122 -SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNTFVGTPFWMAP 173
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 66/134 (49%), Gaps = 9/134 (6%)
Query: 468 FDVECEMMKSIRHRNLIKVISSCSNE----EFKALVLEYMPHGSLEKYLYSSNCILDIFQ 523
F E + ++ H ++ V ++ E +V+EY+ +L +++ +
Sbjct: 59 FRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMT---P 115
Query: 524 RLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMT 583
+ I + +A A + L+F + +IH D+KP+N+++ + DF IA+ + S+T
Sbjct: 116 KRAIEV-IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVT 174
Query: 584 QTQT-LGTIGYMAP 596
QT +GT Y++P
Sbjct: 175 QTAAVIGTAQYLSP 188
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 76/175 (43%), Gaps = 35/175 (20%)
Query: 447 FSENNLIGRGGFALFIRAFKSFDVECEMMKSIRHRNL-------------IKVISSCSNE 493
F++ IG+G F FK D + + +I+ +L I V+S C +
Sbjct: 9 FTKLEKIGKGSFG---EVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 65
Query: 494 EFKA------------LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG 541
+++EY+ GS L LD Q I+ ++ L+YLH
Sbjct: 66 YVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLH-- 121
Query: 542 YSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
S IH D+K +NVLL ++ L+DF +A LT D + + +GT +MAP
Sbjct: 122 -SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNXFVGTPFWMAP 173
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 76/175 (43%), Gaps = 35/175 (20%)
Query: 447 FSENNLIGRGGFALFIRAFKSFDVECEMMKSIRHRNL-------------IKVISSCSNE 493
F++ IG+G F FK D + + +I+ +L I V+S C +
Sbjct: 24 FTKLEKIGKGSFG---EVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 80
Query: 494 EFKA------------LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG 541
+++EY+ GS L LD Q I+ ++ L+YLH
Sbjct: 81 YVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLH-- 136
Query: 542 YSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
S IH D+K +NVLL ++ L+DF +A LT D + + +GT +MAP
Sbjct: 137 -SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNXFVGTPFWMAP 188
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 78/199 (39%), Gaps = 48/199 (24%)
Query: 442 RATDEFSENNLIGRGGFALFIRAFKSFDVECEMMKSIRH--------------------- 480
R +F E ++G+G F ++A + D +K IRH
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQ 62
Query: 481 ------------RNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIM 528
RN +K ++ + + EY + +L ++S N + +
Sbjct: 63 YVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLF 122
Query: 529 IDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAK-------LLTGEDQS 581
+ AL Y+H S +IH +LKP N+ +D++ + DF +AK +L + Q+
Sbjct: 123 RQILEALSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 582 M-----TQTQTLGTIGYMA 595
+ T +GT Y+A
Sbjct: 180 LPGSSDNLTSAIGTAXYVA 198
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 14/133 (10%)
Query: 470 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 529
VE +++ + R ++ + + + LV+ M G + ++Y+ + FQ +
Sbjct: 234 VEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF 293
Query: 530 ---DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQ 586
+ S LE+LH +I+ DLKP NVLLDD+ +SD +A L QT+
Sbjct: 294 YTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA-----GQTK 345
Query: 587 T---LGTIGYMAP 596
T GT G+MAP
Sbjct: 346 TKGYAGTPGFMAP 358
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 68/150 (45%), Gaps = 21/150 (14%)
Query: 463 RAFKSFDVECEMMKSI--RHRNLIKVISSCSNEEFKA----LVLEYMPHGSLEKYLYSSN 516
R KS+ E E+ ++ RH N++ I+S + L+ Y GSL YL +
Sbjct: 42 RDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT 101
Query: 517 CILDIFQRLNIMIDVASALEYLH---FGYSA--LVIHCDLKPSNVLLDDNMVAHLSDFSI 571
LD L I++ +AS L +LH FG + H DLK N+L+ N ++D +
Sbjct: 102 --LDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGL 159
Query: 572 AKLLTGEDQSMTQTQT-----LGTIGYMAP 596
A + QS Q +GT YMAP
Sbjct: 160 AVM---HSQSTNQLDVGNNPRVGTKRYMAP 186
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 6/134 (4%)
Query: 466 KSFDVECEMMKSIRHRNLIKV--ISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQ 523
+ F E +++K++ ++K +S + LV+EY+P G L +L LD +
Sbjct: 57 RDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASR 116
Query: 524 RLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT-GEDQSM 582
L + +EYL S +H DL N+L++ ++DF +AKLL +D +
Sbjct: 117 LLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYV 173
Query: 583 TQTQTLGTIGYMAP 596
+ I + AP
Sbjct: 174 VREPGQSPIFWYAP 187
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 6/134 (4%)
Query: 466 KSFDVECEMMKSIRHRNLIKV--ISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQ 523
+ F E +++K++ ++K +S + LV+EY+P G L +L LD +
Sbjct: 56 RDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASR 115
Query: 524 RLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT-GEDQSM 582
L + +EYL S +H DL N+L++ ++DF +AKLL +D +
Sbjct: 116 LLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYV 172
Query: 583 TQTQTLGTIGYMAP 596
+ I + AP
Sbjct: 173 VREPGQSPIFWYAP 186
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 68/150 (45%), Gaps = 21/150 (14%)
Query: 463 RAFKSFDVECEMMKSI--RHRNLIKVISSCSNEEFKA----LVLEYMPHGSLEKYLYSSN 516
R KS+ E E+ ++ RH N++ I+S + L+ Y GSL YL +
Sbjct: 42 RDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT 101
Query: 517 CILDIFQRLNIMIDVASALEYLH---FGYSA--LVIHCDLKPSNVLLDDNMVAHLSDFSI 571
LD L I++ +AS L +LH FG + H DLK N+L+ N ++D +
Sbjct: 102 --LDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGL 159
Query: 572 AKLLTGEDQSMTQTQT-----LGTIGYMAP 596
A + QS Q +GT YMAP
Sbjct: 160 AVM---HSQSTNQLDVGNNPRVGTKRYMAP 186
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 6/134 (4%)
Query: 466 KSFDVECEMMKSIRHRNLIKV--ISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQ 523
+ F E +++K++ ++K +S LV+EY+P G L +L LD +
Sbjct: 53 RDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASR 112
Query: 524 RLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT-GEDQSM 582
L + +EYL S +H DL N+L++ ++DF +AKLL +D +
Sbjct: 113 LLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXV 169
Query: 583 TQTQTLGTIGYMAP 596
+ I + AP
Sbjct: 170 VREPGQSPIFWYAP 183
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 5/128 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKAL--VLEYMPHGSLEKYLYSSNCILDIFQRLNIM 528
E ++++ +RH+N+I+++ NEE + + V+EY G E + Q
Sbjct: 56 EIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYF 115
Query: 529 IDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTL 588
+ LEYLH S ++H D+KP N+LL +S +A+ L T +
Sbjct: 116 CQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQ 172
Query: 589 GTIGYMAP 596
G+ + P
Sbjct: 173 GSPAFQPP 180
>pdb|2FT3|A Chain A, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|B Chain B, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|C Chain C, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|D Chain D, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|E Chain E, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|F Chain F, Crystal Structure Of The Biglycan Dimer Core Protein
Length = 332
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 93/219 (42%), Gaps = 26/219 (11%)
Query: 83 SKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLID 142
L L L N S F LR L++L + +N+L P L SL +
Sbjct: 78 QHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLP--------SSLVELR 129
Query: 143 LSNNPLDGILPKTSISNLSRSLEEFYMYNCNISGGIPEEISNLT-------NLVEIDLGG 195
+ +N + + PK S L NC GG P E S L + +
Sbjct: 130 IHDNRIRKV-PKGVFSGLRN-------MNCIEMGGNPLENSGFEPGAFDGLKLNYLRISE 181
Query: 196 NKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKLYGSIPACFG 255
KL G IP L + L L+L+ N ++ +D+ R ++LYRL LG N++
Sbjct: 182 AKLTG-IPKDLPE--TLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLS 238
Query: 256 NLASLRILSLGSNKLTSIPLTFWNLKDILQLNFSSNFLT 294
L +LR L L +NKL+ +P +LK + + +N +T
Sbjct: 239 FLPTLRELHLDNNKLSRVPAGLPDLKLLQVVYLHTNNIT 277
Score = 28.5 bits (62), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 28/60 (46%)
Query: 215 LNLEDNILEGSIPDDICRLAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSIP 274
L+L++N + DD L LY L L +NK+ F L L+ L + N L IP
Sbjct: 59 LDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIP 118
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 65/134 (48%), Gaps = 9/134 (6%)
Query: 468 FDVECEMMKSIRHRNLIKVISSCSNE----EFKALVLEYMPHGSLEKYLYSSNCILDIFQ 523
F E + ++ H ++ V + E +V+EY+ +L +++ +
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMT---P 115
Query: 524 RLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMT 583
+ I + +A A + L+F + +IH D+KP+N+++ + DF IA+ + S+T
Sbjct: 116 KRAIEV-IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVT 174
Query: 584 QTQT-LGTIGYMAP 596
QT +GT Y++P
Sbjct: 175 QTAAVIGTAQYLSP 188
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 8/126 (6%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 119
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+A+AL Y H S VIH D+KP N+LL ++DF + S + GT
Sbjct: 120 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDDLCGT 172
Query: 591 IGYMAP 596
+ Y+ P
Sbjct: 173 LDYLPP 178
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 65/134 (48%), Gaps = 9/134 (6%)
Query: 468 FDVECEMMKSIRHRNLIKVISSCSNE----EFKALVLEYMPHGSLEKYLYSSNCILDIFQ 523
F E + ++ H ++ V + E +V+EY+ +L +++ +
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMT---P 115
Query: 524 RLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMT 583
+ I + +A A + L+F + +IH D+KP+N+++ + DF IA+ + S+T
Sbjct: 116 KRAIEV-IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVT 174
Query: 584 QTQT-LGTIGYMAP 596
QT +GT Y++P
Sbjct: 175 QTAAVIGTAQYLSP 188
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 6/134 (4%)
Query: 466 KSFDVECEMMKSIRHRNLIKV--ISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQ 523
+ F E +++K++ ++K +S + LV+EY+P G L +L LD +
Sbjct: 69 RDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASR 128
Query: 524 RLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT-GEDQSM 582
L + +EYL S +H DL N+L++ ++DF +AKLL +D +
Sbjct: 129 LLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYV 185
Query: 583 TQTQTLGTIGYMAP 596
+ I + AP
Sbjct: 186 VREPGQSPIFWYAP 199
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 64/129 (49%), Gaps = 10/129 (7%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++KS+ H N+IK+ ++++ LV E+ G L + + + + D NIM
Sbjct: 96 EISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRH-KFDECDAANIMKQ 154
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDN---MVAHLSDFSIAKLLTGEDQSMTQTQT 587
+ S + YLH ++H D+KP N+LL++ + + DF ++ + +
Sbjct: 155 ILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFS---KDYKLRDR 208
Query: 588 LGTIGYMAP 596
LGT Y+AP
Sbjct: 209 LGTAYYIAP 217
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 8/126 (6%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 116
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+A+AL Y H S VIH D+KP N+LL ++DF + S + GT
Sbjct: 117 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGT 169
Query: 591 IGYMAP 596
+ Y+ P
Sbjct: 170 LDYLPP 175
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 65/134 (48%), Gaps = 9/134 (6%)
Query: 468 FDVECEMMKSIRHRNLIKVISSCSNE----EFKALVLEYMPHGSLEKYLYSSNCILDIFQ 523
F E + ++ H ++ V + E +V+EY+ +L +++ +
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMT---P 115
Query: 524 RLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMT 583
+ I + +A A + L+F + +IH D+KP+N+++ + DF IA+ + S+T
Sbjct: 116 KRAIEV-IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVT 174
Query: 584 QTQT-LGTIGYMAP 596
QT +GT Y++P
Sbjct: 175 QTAAVIGTAQYLSP 188
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 8/126 (6%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E E+ +RH N++++ + L+LEY P G++ + L + D + + +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITE 119
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+A+AL Y H S VIH D+KP N+LL ++DF + S + GT
Sbjct: 120 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGT 172
Query: 591 IGYMAP 596
+ Y+ P
Sbjct: 173 LDYLPP 178
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 8/126 (6%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 116
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+A+AL Y H S VIH D+KP N+LL ++DF + S + GT
Sbjct: 117 LANALSYCH---SKKVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGT 169
Query: 591 IGYMAP 596
+ Y+ P
Sbjct: 170 LDYLPP 175
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 36/183 (19%)
Query: 445 DEFSENNLIGRGGFALFIRAFK--------------SFDV---------ECEMMKSIRHR 481
DE+ IG G + + A + +FDV E +++K +H
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 114
Query: 482 NLIKVIS----SCSNEEFKAL--VLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASAL 535
N+I + + EFK++ VL+ M L + ++SS L + + + L
Sbjct: 115 NIIAIKDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQP-LTLEHVRYFLYQLLRGL 172
Query: 536 EYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLL--TGEDQSMTQTQTLGTIGY 593
+Y+H SA VIH DLKPSN+L+++N + DF +A+ L + + T+ + T Y
Sbjct: 173 KYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWY 229
Query: 594 MAP 596
AP
Sbjct: 230 RAP 232
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 5/126 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 59 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 115
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ L+ L F +S V+H DLKP N+L++ L+DF +A+ + T T + T
Sbjct: 116 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVT 173
Query: 591 IGYMAP 596
+ Y AP
Sbjct: 174 LWYRAP 179
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 8/126 (6%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 116
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+A+AL Y H S VIH D+KP N+LL ++DF + S + GT
Sbjct: 117 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGT 169
Query: 591 IGYMAP 596
+ Y+ P
Sbjct: 170 LDYLPP 175
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 5/126 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 59 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 115
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ L+ L F +S V+H DLKP N+L++ L+DF +A+ + T T + T
Sbjct: 116 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVT 173
Query: 591 IGYMAP 596
+ Y AP
Sbjct: 174 LWYRAP 179
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 55/122 (45%), Gaps = 4/122 (3%)
Query: 467 SFDVECEMMKSIRHRNLIKVISSCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRL 525
F E +MK H N++ ++ C E LV L YM HG L ++ + + +
Sbjct: 76 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 135
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 585
+ VA ++YL S +H DL N +LD+ ++DF +A+ + ++
Sbjct: 136 GFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHN 192
Query: 586 QT 587
+T
Sbjct: 193 KT 194
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 465 FKSFDVECEMMKSIRHRNLIKVISSCSNEE----FKALVLEYMPHGSLEKYLYSSNCILD 520
+ F E + ++ H ++ V + E +V+EY+ +L +++ +
Sbjct: 73 YLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMT- 131
Query: 521 IFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQ 580
+ I + +A A + L+F + +IH D+KP+N+++ + DF IA+ +
Sbjct: 132 --PKRAIEV-IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGN 188
Query: 581 SMTQTQT-LGTIGYMAP 596
S+TQT +GT Y++P
Sbjct: 189 SVTQTAAVIGTAQYLSP 205
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 36/183 (19%)
Query: 445 DEFSENNLIGRGGFALFIRAFK--------------SFDV---------ECEMMKSIRHR 481
DE+ IG G + + A + +FDV E +++K +H
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 113
Query: 482 NLIKVIS----SCSNEEFKAL--VLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASAL 535
N+I + + EFK++ VL+ M L + ++SS L + + + L
Sbjct: 114 NIIAIKDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQP-LTLEHVRYFLYQLLRGL 171
Query: 536 EYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLL--TGEDQSMTQTQTLGTIGY 593
+Y+H SA VIH DLKPSN+L+++N + DF +A+ L + + T+ + T Y
Sbjct: 172 KYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWY 228
Query: 594 MAP 596
AP
Sbjct: 229 RAP 231
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 78/185 (42%), Gaps = 40/185 (21%)
Query: 446 EFSENNLIGRGGFALFIRAFKSFDVECEMMKSIRHRNL-----IKVI------------- 487
+F E LIG GGF +A D + ++K +++ N +K +
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNG 71
Query: 488 ---------------SSCSNEEFKALVLEYMPHGSLEKYLYSSNC-ILDIFQRLNIMIDV 531
SS S + + +E+ G+LE+++ LD L + +
Sbjct: 72 CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQI 131
Query: 532 ASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTI 591
++Y+H S +I+ DLKPSN+ L D + DF + L + + + ++ GT+
Sbjct: 132 TKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK---RXRSKGTL 185
Query: 592 GYMAP 596
YM+P
Sbjct: 186 RYMSP 190
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 73/179 (40%), Gaps = 32/179 (17%)
Query: 444 TDEFSENNLIGRGGFALFIRAFK-----------------------SFDVECEMMKSIRH 480
TDE+ IG+G F++ R K + E + + ++H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 481 RNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 540
N++++ S S E F LV + + G L+ + + + + LE +
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGE----LFEDIVAREYYSEADASHCIQQILEAVLH 118
Query: 541 GYSALVIHCDLKPSNVLLDDN---MVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
+ V+H DLKP N+LL L+DF +A + G+ Q+ GT GY++P
Sbjct: 119 CHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAW--FGFAGTPGYLSP 175
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 8/126 (6%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 119
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+A+AL Y H S VIH D+KP N+LL +++F + S +T GT
Sbjct: 120 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFG----WSVHAPSSRRTTLCGT 172
Query: 591 IGYMAP 596
+ Y+ P
Sbjct: 173 LDYLPP 178
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 5/126 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 108
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ L+ L F +S V+H DLKP N+L++ L+DF +A+ + T T + T
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVT 166
Query: 591 IGYMAP 596
+ Y AP
Sbjct: 167 LWYRAP 172
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 8/126 (6%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E E+ +RH N++++ + L+LEY P G++ + L + D + + +
Sbjct: 84 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITE 142
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+A+AL Y H S VIH D+KP N+LL ++DF + S + GT
Sbjct: 143 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDDLCGT 195
Query: 591 IGYMAP 596
+ Y+ P
Sbjct: 196 LDYLPP 201
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 60/128 (46%), Gaps = 10/128 (7%)
Query: 479 RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 538
+H N++ ++ +C++ ++ EY +G L +L + +L+ I AS + L
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLL 167
Query: 539 HF------GYSALV----IHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTL 588
HF G + L IH D+ NVLL + VA + DF +A+ + + + +
Sbjct: 168 HFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 227
Query: 589 GTIGYMAP 596
+ +MAP
Sbjct: 228 LPVKWMAP 235
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 5/126 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 109
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ L+ L F +S V+H DLKP N+L++ L+DF +A+ + T T + T
Sbjct: 110 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVT 167
Query: 591 IGYMAP 596
+ Y AP
Sbjct: 168 LWYRAP 173
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 9/123 (7%)
Query: 474 MMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVAS 533
M+ + H +I++ + + + ++++Y+ G L L S + + +V
Sbjct: 59 MLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKF-YAAEVCL 117
Query: 534 ALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGY 593
ALEYLH S +I+ DLKP N+LLD N ++DF AK + + GT Y
Sbjct: 118 ALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLC-----GTPDY 169
Query: 594 MAP 596
+AP
Sbjct: 170 IAP 172
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 5/126 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 107
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ L+ L F +S V+H DLKP N+L++ L+DF +A+ + T T + T
Sbjct: 108 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVT 165
Query: 591 IGYMAP 596
+ Y AP
Sbjct: 166 LWYRAP 171
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 5/126 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 108
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ L+ L F +S V+H DLKP N+L++ L+DF +A+ + T T + T
Sbjct: 109 LFQLLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVT 166
Query: 591 IGYMAP 596
+ Y AP
Sbjct: 167 LWYRAP 172
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 5/126 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 56 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 112
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ L+ L F +S V+H DLKP N+L++ L+DF +A+ + T T + T
Sbjct: 113 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVT 170
Query: 591 IGYMAP 596
+ Y AP
Sbjct: 171 LWYRAP 176
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 5/126 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 108
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ L+ L F +S V+H DLKP N+L++ L+DF +A+ + T T + T
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVT 166
Query: 591 IGYMAP 596
+ Y AP
Sbjct: 167 LWYRAP 172
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 77/188 (40%), Gaps = 50/188 (26%)
Query: 444 TDEFSENNLIGRGGFALFIRAFK-----------------------SFDVECEMMKSIRH 480
TDE+ +G+G F++ R K + E + + ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 481 RNLIKVISSCSNEEFKALVLEYMPHGSL-----EKYLYS----SNCILDIFQRLNIMIDV 531
N++++ S S E F LV + + G L + YS S+CI I + +N
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVN----- 117
Query: 532 ASALEYLHFGYSALVIHCDLKPSNVLL---DDNMVAHLSDFSIAKLLTGEDQSMTQTQTL 588
+ H ++H DLKP N+LL L+DF +A + G+ Q+
Sbjct: 118 -----HCHLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAW--FGFA 167
Query: 589 GTIGYMAP 596
GT GY++P
Sbjct: 168 GTPGYLSP 175
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 8/126 (6%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 119
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+A+AL Y H S VIH D+KP N+LL ++DF + S + GT
Sbjct: 120 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGT 172
Query: 591 IGYMAP 596
+ Y+ P
Sbjct: 173 LDYLPP 178
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 68/126 (53%), Gaps = 8/126 (6%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++ +RH ++IK+ +++ +V+EY + L Y+ + + + R
Sbjct: 63 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEAR-RFFQQ 120
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ SA+EY H ++H DLKP N+LLD+++ ++DF ++ ++T D + +T + G+
Sbjct: 121 IISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKT-SCGS 174
Query: 591 IGYMAP 596
Y AP
Sbjct: 175 PNYAAP 180
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 5/126 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 108
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ L+ L F +S V+H DLKP N+L++ L+DF +A+ + T T + T
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVT 166
Query: 591 IGYMAP 596
+ Y AP
Sbjct: 167 LWYRAP 172
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 5/126 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 107
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ L+ L F +S V+H DLKP N+L++ L+DF +A+ + T T + T
Sbjct: 108 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVT 165
Query: 591 IGYMAP 596
+ Y AP
Sbjct: 166 LWYRAP 171
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 8/126 (6%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E E+ +RH N++++ + L+LEY P G++ + L + D + + +
Sbjct: 60 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITE 118
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+A+AL Y H S VIH D+KP N+LL ++DF + S + GT
Sbjct: 119 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGT 171
Query: 591 IGYMAP 596
+ Y+ P
Sbjct: 172 LDYLPP 177
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 5/126 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 108
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ L+ L F +S V+H DLKP N+L++ L+DF +A+ + T T + T
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVT 166
Query: 591 IGYMAP 596
+ Y AP
Sbjct: 167 LWYRAP 172
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 5/126 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 107
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ L+ L F +S V+H DLKP N+L++ L+DF +A+ + T T + T
Sbjct: 108 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVT 165
Query: 591 IGYMAP 596
+ Y AP
Sbjct: 166 LWYRAP 171
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 68/126 (53%), Gaps = 8/126 (6%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++ +RH ++IK+ +++ +V+EY + L Y+ + + + R
Sbjct: 64 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEAR-RFFQQ 121
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ SA+EY H ++H DLKP N+LLD+++ ++DF ++ ++T D + +T + G+
Sbjct: 122 IISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKT-SCGS 175
Query: 591 IGYMAP 596
Y AP
Sbjct: 176 PNYAAP 181
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 68/126 (53%), Gaps = 8/126 (6%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++ +RH ++IK+ +++ +V+EY + L Y+ + + + R
Sbjct: 54 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEAR-RFFQQ 111
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ SA+EY H ++H DLKP N+LLD+++ ++DF ++ ++T D + +T + G+
Sbjct: 112 IISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKT-SCGS 165
Query: 591 IGYMAP 596
Y AP
Sbjct: 166 PNYAAP 171
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 68/126 (53%), Gaps = 8/126 (6%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++ +RH ++IK+ +++ +V+EY + L Y+ + + + R
Sbjct: 58 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEAR-RFFQQ 115
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ SA+EY H ++H DLKP N+LLD+++ ++DF ++ ++T D + +T + G+
Sbjct: 116 IISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKT-SCGS 169
Query: 591 IGYMAP 596
Y AP
Sbjct: 170 PNYAAP 175
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 8/126 (6%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 60 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 118
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+A+AL Y H S VIH D+KP N+LL +++F + S +T GT
Sbjct: 119 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFG----WSVHAPSSRRTTLCGT 171
Query: 591 IGYMAP 596
+ Y+ P
Sbjct: 172 LDYLPP 177
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 8/126 (6%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 59 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 117
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+A+AL Y H S VIH D+KP N+LL ++DF + S + GT
Sbjct: 118 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDTLCGT 170
Query: 591 IGYMAP 596
+ Y+ P
Sbjct: 171 LDYLPP 176
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 55/122 (45%), Gaps = 4/122 (3%)
Query: 467 SFDVECEMMKSIRHRNLIKVISSCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRL 525
F E +MK H N++ ++ C E LV L YM HG L ++ + + +
Sbjct: 69 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 128
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 585
+ VA ++YL S +H DL N +LD+ ++DF +A+ + ++
Sbjct: 129 GFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHN 185
Query: 586 QT 587
+T
Sbjct: 186 KT 187
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 8/129 (6%)
Query: 470 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 529
E +M+ + + ++++I C E + LV+E G L KYL + + D + ++
Sbjct: 419 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVH 476
Query: 530 DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLG 589
V+ ++YL + +H DL NVLL A +SDF ++K L D++ + QT G
Sbjct: 477 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA-DENYYKAQTHG 532
Query: 590 T--IGYMAP 596
+ + AP
Sbjct: 533 KWPVKWYAP 541
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 8/129 (6%)
Query: 470 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 529
E +M+ + + ++++I C E + LV+E G L KYL + + D + ++
Sbjct: 420 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVH 477
Query: 530 DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLG 589
V+ ++YL + +H DL NVLL A +SDF ++K L D++ + QT G
Sbjct: 478 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA-DENYYKAQTHG 533
Query: 590 T--IGYMAP 596
+ + AP
Sbjct: 534 KWPVKWYAP 542
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 77/188 (40%), Gaps = 50/188 (26%)
Query: 444 TDEFSENNLIGRGGFALFIRAFK-----------------------SFDVECEMMKSIRH 480
TDE+ +G+G F++ R K + E + + ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 481 RNLIKVISSCSNEEFKALVLEYMPHGSL-----EKYLYS----SNCILDIFQRLNIMIDV 531
N++++ S S E F LV + + G L + YS S+CI I + +N
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVN----- 117
Query: 532 ASALEYLHFGYSALVIHCDLKPSNVLL---DDNMVAHLSDFSIAKLLTGEDQSMTQTQTL 588
+ H ++H DLKP N+LL L+DF +A + G+ Q+
Sbjct: 118 -----HCHLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFA-- 167
Query: 589 GTIGYMAP 596
GT GY++P
Sbjct: 168 GTPGYLSP 175
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 13/127 (10%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKAL-----VLEYMPHGSLEKYLYSSNC 517
R + F E MK H N+I+++ C + + +L +M +G L YL S
Sbjct: 78 REIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRL 137
Query: 518 -----ILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIA 572
+ + L M+D+A +EYL + +H DL N +L D+M ++DF ++
Sbjct: 138 ETGPKHIPLQTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDMTVCVADFGLS 194
Query: 573 KLLTGED 579
K + D
Sbjct: 195 KKIYSGD 201
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 73/177 (41%), Gaps = 32/177 (18%)
Query: 447 FSENNLIGRGGFALFIRA-------------FKSFDV-----------ECEMMKSIRHRN 482
F IGRG F+ RA + FD+ E +++K + H N
Sbjct: 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPN 93
Query: 483 LIKVISSCSNEEFKALVLEYMPHGSLE---KYLYSSNCILDIFQRLNIMIDVASALEYLH 539
+IK +S + +VLE G L K+ ++ + + SALE++H
Sbjct: 94 VIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH 153
Query: 540 FGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
S V+H D+KP+NV + V L D + + + ++ +GT YM+P
Sbjct: 154 ---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS--KTTAAHSLVGTPYYMSP 205
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 55/122 (45%), Gaps = 4/122 (3%)
Query: 467 SFDVECEMMKSIRHRNLIKVISSCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRL 525
F E +MK H N++ ++ C E LV L YM HG L ++ + + +
Sbjct: 95 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 154
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 585
+ VA ++YL S +H DL N +LD+ ++DF +A+ + ++
Sbjct: 155 GFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHN 211
Query: 586 QT 587
+T
Sbjct: 212 KT 213
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 11/127 (8%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +++++ L+K+ S + +V+EY+P G + +L + R
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQ 150
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTL-G 589
+ EYLH S +I+ DLKP N+L+D ++DF AK + G +T TL G
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWTLCG 201
Query: 590 TIGYMAP 596
T Y+AP
Sbjct: 202 TPEYLAP 208
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 62/112 (55%), Gaps = 5/112 (4%)
Query: 464 AFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQ 523
+ ++F E +MK+++H L+K+ + + E ++ E+M GSL +L S Q
Sbjct: 220 SVEAFLAEANVMKTLQHDKLVKLHAVVTKEPI-YIITEFMAKGSLLDFLKSDEGSK---Q 275
Query: 524 RLNIMIDVASAL-EYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKL 574
L +ID ++ + E + F IH DL+ +N+L+ ++V ++DF +A++
Sbjct: 276 PLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARV 327
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 55/122 (45%), Gaps = 4/122 (3%)
Query: 467 SFDVECEMMKSIRHRNLIKVISSCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRL 525
F E +MK H N++ ++ C E LV L YM HG L ++ + + +
Sbjct: 96 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 155
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 585
+ VA ++YL S +H DL N +LD+ ++DF +A+ + ++
Sbjct: 156 GFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHN 212
Query: 586 QT 587
+T
Sbjct: 213 KT 214
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 55/122 (45%), Gaps = 4/122 (3%)
Query: 467 SFDVECEMMKSIRHRNLIKVISSCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRL 525
F E +MK H N++ ++ C E LV L YM HG L ++ + + +
Sbjct: 75 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 134
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 585
+ VA ++YL S +H DL N +LD+ ++DF +A+ + ++
Sbjct: 135 GFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHN 191
Query: 586 QT 587
+T
Sbjct: 192 KT 193
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 55/122 (45%), Gaps = 4/122 (3%)
Query: 467 SFDVECEMMKSIRHRNLIKVISSCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRL 525
F E +MK H N++ ++ C E LV L YM HG L ++ + + +
Sbjct: 77 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 136
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 585
+ VA ++YL S +H DL N +LD+ ++DF +A+ + ++
Sbjct: 137 GFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHN 193
Query: 586 QT 587
+T
Sbjct: 194 KT 195
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 11/127 (8%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +++++ L+K+ S + +V+EY+P G + +L + R
Sbjct: 77 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQ 135
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTL-G 589
+ EYLH S +I+ DLKP N+L+D ++DF AK + G +T TL G
Sbjct: 136 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWTLCG 186
Query: 590 TIGYMAP 596
T Y+AP
Sbjct: 187 TPEYLAP 193
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 9/126 (7%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +++++ L+K+ S + +V+EYMP G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-----GT 201
Query: 591 IGYMAP 596
Y+AP
Sbjct: 202 PEYLAP 207
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 9/126 (7%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +++++ L+K+ S + +V+EYMP G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-----GT 201
Query: 591 IGYMAP 596
Y+AP
Sbjct: 202 PEYLAP 207
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 55/122 (45%), Gaps = 4/122 (3%)
Query: 467 SFDVECEMMKSIRHRNLIKVISSCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRL 525
F E +MK H N++ ++ C E LV L YM HG L ++ + + +
Sbjct: 74 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 133
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 585
+ VA ++YL S +H DL N +LD+ ++DF +A+ + ++
Sbjct: 134 GFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHN 190
Query: 586 QT 587
+T
Sbjct: 191 KT 192
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 55/122 (45%), Gaps = 4/122 (3%)
Query: 467 SFDVECEMMKSIRHRNLIKVISSCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRL 525
F E +MK H N++ ++ C E LV L YM HG L ++ + + +
Sbjct: 72 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 131
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 585
+ VA ++YL S +H DL N +LD+ ++DF +A+ + ++
Sbjct: 132 GFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHN 188
Query: 586 QT 587
+T
Sbjct: 189 KT 190
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 64/134 (47%), Gaps = 9/134 (6%)
Query: 468 FDVECEMMKSIRHRNLIKVISSCSNE----EFKALVLEYMPHGSLEKYLYSSNCILDIFQ 523
F E + ++ H ++ V + E +V+EY+ +L +++ +
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMT---P 115
Query: 524 RLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMT 583
+ I + +A A + L+F + +IH D+KP+N+L+ + DF IA+ + S+
Sbjct: 116 KRAIEV-IADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVX 174
Query: 584 QTQT-LGTIGYMAP 596
QT +GT Y++P
Sbjct: 175 QTAAVIGTAQYLSP 188
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 55/122 (45%), Gaps = 4/122 (3%)
Query: 467 SFDVECEMMKSIRHRNLIKVISSCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRL 525
F E +MK H N++ ++ C E LV L YM HG L ++ + + +
Sbjct: 77 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 136
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 585
+ VA ++YL S +H DL N +LD+ ++DF +A+ + ++
Sbjct: 137 GFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHN 193
Query: 586 QT 587
+T
Sbjct: 194 KT 195
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 134/303 (44%), Gaps = 43/303 (14%)
Query: 63 KLYLWGNNFSGTIPRFIFN-ASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTS 121
K L N + T+ + + + L LG+ S G L NL Q+ N LT
Sbjct: 23 KTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGV-----EYLNNLTQINFSNNQLTD 77
Query: 122 STP---------------ELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEE 166
TP +++ ++ L+N +LT + L NN + I P +++NL+R LE
Sbjct: 78 ITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNR-LEL 136
Query: 167 FYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSI 226
+IS +S LT+L +++ N++ P L L L+RL++ N +
Sbjct: 137 SSNTISDISA-----LSGLTSLQQLNFSSNQVTDLKP--LANLTTLERLDISSNKVS--- 186
Query: 227 PDDICRLAELYRLE--LGSNKLYGSIPACFGNLASLRILSLGSNKLTSIPLTFWNLKDIL 284
DI LA+L LE + +N I G L +L LSL N+L I T +L ++
Sbjct: 187 --DISVLAKLTNLESLIATNNQISDI-TPLGILTNLDELSLNGNQLKDIG-TLASLTNLT 242
Query: 285 QLNFSSNFLTGPLLLEIGNLKVLIGIDFSMNNFSGVIPREIGEKLSYLEDLNLSFNKLKG 344
L+ ++N ++ L + L L + N S + P L+ L +L L+ N+L+
Sbjct: 243 DLDLANNQISN--LAPLSGLTKLTELKLGANQISNISPL---AGLTALTNLELNENQLED 297
Query: 345 EIP 347
P
Sbjct: 298 ISP 300
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 55/122 (45%), Gaps = 4/122 (3%)
Query: 467 SFDVECEMMKSIRHRNLIKVISSCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRL 525
F E +MK H N++ ++ C E LV L YM HG L ++ + + +
Sbjct: 76 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 135
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 585
+ VA ++YL S +H DL N +LD+ ++DF +A+ + ++
Sbjct: 136 GFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHN 192
Query: 586 QT 587
+T
Sbjct: 193 KT 194
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 61/133 (45%), Gaps = 9/133 (6%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKAL--VLEYMPHGSLEKYLYS---SNCILDIFQRL 525
E +++ ++H N+++ + L V+EY G L + LD L
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 526 NIMIDVASALEYLHFGYSA--LVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMT 583
+M + AL+ H V+H DLKP+NV LD L DF +A++L D S
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL-NHDTSFA 173
Query: 584 QTQTLGTIGYMAP 596
+T +GT YM+P
Sbjct: 174 KT-FVGTPYYMSP 185
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 62/127 (48%), Gaps = 7/127 (5%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYS-SNCILDIFQRLNIMI 529
E ++++ + R ++ + + ++ LVL M G L+ ++Y + +
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAA 293
Query: 530 DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLG 589
++ LE LH +++ DLKP N+LLDD+ +SD +A + + T +G
Sbjct: 294 EICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVP---EGQTIKGRVG 347
Query: 590 TIGYMAP 596
T+GYMAP
Sbjct: 348 TVGYMAP 354
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 80/201 (39%), Gaps = 49/201 (24%)
Query: 442 RATDEFSENNLIGRGGFALFIRAFKSFDVECEMMKSIR-------HRNLIKVISSCSNEE 494
R +F +GRGGF + A D +K IR +++ + + + E
Sbjct: 2 RYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLE 61
Query: 495 FKALV-----------LEYMPHGSLEKYLY---------------SSNCILDIFQR---L 525
+V E + S + YLY + C ++ +R L
Sbjct: 62 HPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCL 121
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMT-- 583
+I + +A A+E+LH S ++H DLKPSN+ + V + DF + + +++ T
Sbjct: 122 HIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL 178
Query: 584 --------QTQTLGTIGYMAP 596
T +GT YM+P
Sbjct: 179 TPMPAYARHTGQVGTKLYMSP 199
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 8/129 (6%)
Query: 470 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 529
E +M+ + + ++++I C E + LV+E G L KYL + + D + ++
Sbjct: 61 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVH 118
Query: 530 DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLG 589
V+ ++YL + +H DL NVLL A +SDF ++K L D++ + QT G
Sbjct: 119 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA-DENXYKAQTHG 174
Query: 590 T--IGYMAP 596
+ + AP
Sbjct: 175 KWPVKWYAP 183
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 4/106 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E + K + H N++K+ E+ LV EY G + YL + + R
Sbjct: 63 EVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFR-Q 121
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT 576
+ SA++Y H ++H DLK N+LLD + ++DF + T
Sbjct: 122 IVSAVQYCH---QKFIVHRDLKAENLLLDADXNIKIADFGFSNEFT 164
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 8/129 (6%)
Query: 470 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 529
E +M+ + + ++++I C E + LV+E G L KYL + + D + ++
Sbjct: 61 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVH 118
Query: 530 DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLG 589
V+ ++YL + +H DL NVLL A +SDF ++K L D++ + QT G
Sbjct: 119 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA-DENYYKAQTHG 174
Query: 590 T--IGYMAP 596
+ + AP
Sbjct: 175 KWPVKWYAP 183
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 9/126 (7%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +++++ L+K+ S + +V+EY+P G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQ 149
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 591 IGYMAP 596
Y+AP
Sbjct: 202 PEYLAP 207
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 9/126 (7%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +++++ L+K+ S + +V+EY+P G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQ 149
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 591 IGYMAP 596
Y+AP
Sbjct: 202 PEYLAP 207
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 9/126 (7%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +++++ L+K+ S + +V+EY+P G + +L + R
Sbjct: 84 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQ 142
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + GT
Sbjct: 143 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 194
Query: 591 IGYMAP 596
Y+AP
Sbjct: 195 PEYLAP 200
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 9/126 (7%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +++++ L+K+ S + +V+EY+P G + +L + R
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQ 150
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + GT
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 202
Query: 591 IGYMAP 596
Y+AP
Sbjct: 203 PEYLAP 208
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 8/129 (6%)
Query: 470 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 529
E +M+ + + ++++I C E + LV+E G L KYL + + D + ++
Sbjct: 55 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVH 112
Query: 530 DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLG 589
V+ ++YL + +H DL NVLL A +SDF ++K L D++ + QT G
Sbjct: 113 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA-DENYYKAQTHG 168
Query: 590 T--IGYMAP 596
+ + AP
Sbjct: 169 KWPVKWYAP 177
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 62/127 (48%), Gaps = 7/127 (5%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYS-SNCILDIFQRLNIMI 529
E ++++ + R ++ + + ++ LVL M G L+ ++Y + +
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAA 293
Query: 530 DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLG 589
++ LE LH +++ DLKP N+LLDD+ +SD +A + + T +G
Sbjct: 294 EICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVP---EGQTIKGRVG 347
Query: 590 TIGYMAP 596
T+GYMAP
Sbjct: 348 TVGYMAP 354
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 8/129 (6%)
Query: 470 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 529
E +M+ + + ++++I C E + LV+E G L KYL + + D + ++
Sbjct: 67 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVH 124
Query: 530 DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLG 589
V+ ++YL + +H DL NVLL A +SDF ++K L D++ + QT G
Sbjct: 125 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA-DENYYKAQTHG 180
Query: 590 T--IGYMAP 596
+ + AP
Sbjct: 181 KWPVKWYAP 189
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 535 LEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYM 594
LE +H + ++H DLKP+N L+ D M+ L DF IA + + S+ + +GT+ YM
Sbjct: 118 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYM 176
Query: 595 AP 596
P
Sbjct: 177 PP 178
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 535 LEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYM 594
LE +H + ++H DLKP+N L+ D M+ L DF IA + + S+ + +GT+ YM
Sbjct: 121 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYM 179
Query: 595 AP 596
P
Sbjct: 180 PP 181
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 9/126 (7%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +++++ L+K+ S + +V+EY+P G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 591 IGYMAP 596
Y+AP
Sbjct: 202 PEYLAP 207
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 133/303 (43%), Gaps = 43/303 (14%)
Query: 63 KLYLWGNNFSGTIPRFIFN-ASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTS 121
K L N + T+ + + + L LG+ S G L NL Q+ N LT
Sbjct: 23 KTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGV-----EYLNNLTQINFSNNQLTD 77
Query: 122 STP---------------ELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEE 166
TP +++ ++ L+N +LT + L NN + I P +++NL+R LE
Sbjct: 78 ITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNR-LEL 136
Query: 167 FYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSI 226
+IS +S LT+L ++ N++ P L L L+RL++ N +
Sbjct: 137 SSNTISDISA-----LSGLTSLQQLSFSSNQVTDLKP--LANLTTLERLDISSNKVS--- 186
Query: 227 PDDICRLAELYRLE--LGSNKLYGSIPACFGNLASLRILSLGSNKLTSIPLTFWNLKDIL 284
DI LA+L LE + +N I G L +L LSL N+L I T +L ++
Sbjct: 187 --DISVLAKLTNLESLIATNNQISDI-TPLGILTNLDELSLNGNQLKDIG-TLASLTNLT 242
Query: 285 QLNFSSNFLTGPLLLEIGNLKVLIGIDFSMNNFSGVIPREIGEKLSYLEDLNLSFNKLKG 344
L+ ++N ++ L + L L + N S + P L+ L +L L+ N+L+
Sbjct: 243 DLDLANNQISN--LAPLSGLTKLTELKLGANQISNISPL---AGLTALTNLELNENQLED 297
Query: 345 EIP 347
P
Sbjct: 298 ISP 300
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 8/129 (6%)
Query: 470 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 529
E +M+ + + ++++I C E + LV+E G L KYL + + D + ++
Sbjct: 77 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVH 134
Query: 530 DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLG 589
V+ ++YL + +H DL NVLL A +SDF ++K L D++ + QT G
Sbjct: 135 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA-DENYYKAQTHG 190
Query: 590 T--IGYMAP 596
+ + AP
Sbjct: 191 KWPVKWYAP 199
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 8/129 (6%)
Query: 470 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 529
E +M+ + + ++++I C E + LV+E G L KYL + + D + ++
Sbjct: 77 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVH 134
Query: 530 DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLG 589
V+ ++YL + +H DL NVLL A +SDF ++K L D++ + QT G
Sbjct: 135 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA-DENYYKAQTHG 190
Query: 590 T--IGYMAP 596
+ + AP
Sbjct: 191 KWPVKWYAP 199
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 9/126 (7%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +++++ L+K+ S + +V+EY+P G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 591 IGYMAP 596
Y+AP
Sbjct: 202 PEYLAP 207
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 535 LEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYM 594
LE +H + ++H DLKP+N L+ D M+ L DF IA + + S+ + +GT+ YM
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYM 223
Query: 595 AP 596
P
Sbjct: 224 PP 225
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 8/129 (6%)
Query: 470 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 529
E +M+ + + ++++I C E + LV+E G L KYL + + D + ++
Sbjct: 57 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVH 114
Query: 530 DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLG 589
V+ ++YL + +H DL NVLL A +SDF ++K L D++ + QT G
Sbjct: 115 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA-DENYYKAQTHG 170
Query: 590 T--IGYMAP 596
+ + AP
Sbjct: 171 KWPVKWYAP 179
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 8/129 (6%)
Query: 470 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 529
E +M+ + + ++++I C E + LV+E G L KYL + + D + ++
Sbjct: 75 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVH 132
Query: 530 DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLG 589
V+ ++YL + +H DL NVLL A +SDF ++K L D++ + QT G
Sbjct: 133 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA-DENYYKAQTHG 188
Query: 590 T--IGYMAP 596
+ + AP
Sbjct: 189 KWPVKWYAP 197
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 535 LEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYM 594
LE +H + ++H DLKP+N L+ D M+ L DF IA + + S+ + +GT+ YM
Sbjct: 117 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYM 175
Query: 595 AP 596
P
Sbjct: 176 PP 177
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 81/179 (45%), Gaps = 35/179 (19%)
Query: 445 DEFSENNLIGRGGFALF----------IRAFKSFDVECEMMK-----SIRHRNLIKVISS 489
++FS + +IGRGGF + A K D + MK ++ R ++ ++S+
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 247
Query: 490 -------CSNEEFK-----ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEY 537
C + F + +L+ M G L +L + R ++ LE+
Sbjct: 248 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIILGLEH 306
Query: 538 LHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
+H + V++ DLKP+N+LLD++ +SD +A + + ++GT GYMAP
Sbjct: 307 MH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA----SVGTHGYMAP 358
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 81/179 (45%), Gaps = 35/179 (19%)
Query: 445 DEFSENNLIGRGGFALF----------IRAFKSFDVECEMMK-----SIRHRNLIKVISS 489
++FS + +IGRGGF + A K D + MK ++ R ++ ++S+
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 490 -------CSNEEFK-----ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEY 537
C + F + +L+ M G L +L + R ++ LE+
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIILGLEH 307
Query: 538 LHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
+H + V++ DLKP+N+LLD++ +SD +A + + ++GT GYMAP
Sbjct: 308 MH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA----SVGTHGYMAP 359
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 66/148 (44%), Gaps = 26/148 (17%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI------------ 518
E ++K + H ++IK+ +CS + L++EY +GSL +L S +
Sbjct: 76 EFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRN 135
Query: 519 -----------LDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLS 567
L + ++ ++ ++YL ++H DL N+L+ + +S
Sbjct: 136 SSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMKIS 192
Query: 568 DFSIAKLLTGEDQSMTQTQTLGTIGYMA 595
DF +++ + ED + ++Q + +MA
Sbjct: 193 DFGLSRDVYEEDSXVKRSQGRIPVKWMA 220
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 9/126 (7%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +++++ L+K+ S + +V+EY+P G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 591 IGYMAP 596
Y+AP
Sbjct: 202 PEYLAP 207
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 66/145 (45%), Gaps = 20/145 (13%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF-------- 522
E ++K + H ++IK+ +CS + L++EY +GSL +L S + +
Sbjct: 76 EFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRN 135
Query: 523 --------QRLNIMIDVASALEYLHFGYSAL----VIHCDLKPSNVLLDDNMVAHLSDFS 570
+R M D+ S + G L ++H DL N+L+ + +SDF
Sbjct: 136 SSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFG 195
Query: 571 IAKLLTGEDQSMTQTQTLGTIGYMA 595
+++ + ED + ++Q + +MA
Sbjct: 196 LSRDVYEEDSXVKRSQGRIPVKWMA 220
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 133/303 (43%), Gaps = 43/303 (14%)
Query: 63 KLYLWGNNFSGTIPRFIFN-ASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTS 121
K L N + T+ + + + L LG+ S G L NL Q+ N LT
Sbjct: 23 KTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGV-----EYLNNLTQINFSNNQLTD 77
Query: 122 STP---------------ELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEE 166
TP +++ ++ L+N +LT + L NN + I P +++NL+R LE
Sbjct: 78 ITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNR-LEL 136
Query: 167 FYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSI 226
+IS +S LT+L ++ N++ P L L L+RL++ N +
Sbjct: 137 SSNTISDISA-----LSGLTSLQQLSFSSNQVTDLKP--LANLTTLERLDISSNKVS--- 186
Query: 227 PDDICRLAELYRLE--LGSNKLYGSIPACFGNLASLRILSLGSNKLTSIPLTFWNLKDIL 284
DI LA+L LE + +N I G L +L LSL N+L I T +L ++
Sbjct: 187 --DISVLAKLTNLESLIATNNQISDI-TPLGILTNLDELSLNGNQLKDIG-TLASLTNLT 242
Query: 285 QLNFSSNFLTGPLLLEIGNLKVLIGIDFSMNNFSGVIPREIGEKLSYLEDLNLSFNKLKG 344
L+ ++N ++ L + L L + N S + P L+ L +L L+ N+L+
Sbjct: 243 DLDLANNQISN--LAPLSGLTKLTELKLGANQISNISPL---AGLTALTNLELNENQLED 297
Query: 345 EIP 347
P
Sbjct: 298 ISP 300
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 81/179 (45%), Gaps = 35/179 (19%)
Query: 445 DEFSENNLIGRGGFALF----------IRAFKSFDVECEMMK-----SIRHRNLIKVISS 489
++FS + +IGRGGF + A K D + MK ++ R ++ ++S+
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 490 -------CSNEEFK-----ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEY 537
C + F + +L+ M G L +L + R ++ LE+
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIILGLEH 307
Query: 538 LHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
+H + V++ DLKP+N+LLD++ +SD +A + + ++GT GYMAP
Sbjct: 308 MH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA----SVGTHGYMAP 359
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 81/179 (45%), Gaps = 35/179 (19%)
Query: 445 DEFSENNLIGRGGFALF----------IRAFKSFDVECEMMK-----SIRHRNLIKVISS 489
++FS + +IGRGGF + A K D + MK ++ R ++ ++S+
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 490 -------CSNEEFK-----ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEY 537
C + F + +L+ M G L +L + R ++ LE+
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIILGLEH 307
Query: 538 LHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
+H + V++ DLKP+N+LLD++ +SD +A + + ++GT GYMAP
Sbjct: 308 MH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA----SVGTHGYMAP 359
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 52/108 (48%), Gaps = 4/108 (3%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSNE--EFKALVLEYMPHGSLEKYLYS-SNCIL 519
R + F+ EC ++ H N++ V+ +C + L+ + P+GSL L+ +N ++
Sbjct: 49 RKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVV 108
Query: 520 DIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLS 567
D Q + +D A +LH L+ L +V +D++ A +S
Sbjct: 109 DQSQAVKFALDXARGXAFLH-TLEPLIPRHALNSRSVXIDEDXTARIS 155
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 535 LEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYM 594
LE +H + ++H DLKP+N L+ D M+ L DF IA + + S+ + +GT+ YM
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYM 223
Query: 595 AP 596
P
Sbjct: 224 PP 225
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 535 LEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYM 594
LE +H + ++H DLKP+N L+ D M+ L DF IA + + S+ + +GT+ YM
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYM 195
Query: 595 AP 596
P
Sbjct: 196 PP 197
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 74/149 (49%), Gaps = 17/149 (11%)
Query: 462 IRAFKSFDVECEM--MKSIRHRNLIKVISS----CSNEEFKALVLEYMPHGSLEKYLYSS 515
I+ +S+ E E+ + ++H N+++ I + S + L+ + GSL +L ++
Sbjct: 57 IQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKAN 116
Query: 516 NCILDIFQRLNIMIDVASALEYLHF-------GYSALVIHCDLKPSNVLLDDNMVAHLSD 568
++ + +I +A L YLH G+ + H D+K NVLL +N+ A ++D
Sbjct: 117 --VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIAD 174
Query: 569 FSIA-KLLTGEDQSMTQTQTLGTIGYMAP 596
F +A K G+ T Q +GT YMAP
Sbjct: 175 FGLALKFEAGKSAGDTHGQ-VGTRRYMAP 202
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 9/126 (7%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +++++ L+K+ S + +V+EY+P G + +L + R
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQ 150
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + GT
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 202
Query: 591 IGYMAP 596
Y+AP
Sbjct: 203 PEYLAP 208
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 9/126 (7%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +++++ L+K+ S + +V+EY+P G + +L + R
Sbjct: 112 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQ 170
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + GT
Sbjct: 171 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 222
Query: 591 IGYMAP 596
Y+AP
Sbjct: 223 PEYLAP 228
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 66/148 (44%), Gaps = 26/148 (17%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI------------ 518
E ++K + H ++IK+ +CS + L++EY +GSL +L S +
Sbjct: 76 EFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRN 135
Query: 519 -----------LDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLS 567
L + ++ ++ ++YL ++H DL N+L+ + +S
Sbjct: 136 SSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMKIS 192
Query: 568 DFSIAKLLTGEDQSMTQTQTLGTIGYMA 595
DF +++ + ED + ++Q + +MA
Sbjct: 193 DFGLSRDVYEEDSYVKRSQGRIPVKWMA 220
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 64/126 (50%), Gaps = 5/126 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 56 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 112
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ L+ L F +S V+H DLKP N+L++ L+DF +A+ + T + T
Sbjct: 113 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVT 170
Query: 591 IGYMAP 596
+ Y AP
Sbjct: 171 LWYRAP 176
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 9/126 (7%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +++++ L+K+ S + +V+EY+P G + +L + R
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQ 150
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + GT
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 202
Query: 591 IGYMAP 596
Y+AP
Sbjct: 203 PEYLAP 208
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 9/126 (7%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +++++ L+K+ S + +V+EY+P G + +L + R
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQ 150
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + GT
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 202
Query: 591 IGYMAP 596
Y+AP
Sbjct: 203 PEYLAP 208
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 9/126 (7%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +++++ L+K+ S + +V+EY+P G + +L + R
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQ 150
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + GT
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 202
Query: 591 IGYMAP 596
Y+AP
Sbjct: 203 PEYLAP 208
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 9/126 (7%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +++++ L+K+ S + +V+EY+P G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 591 IGYMAP 596
Y+AP
Sbjct: 202 PEYLAP 207
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 9/126 (7%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +++++ L+K+ S + +V+EY+P G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 591 IGYMAP 596
Y+AP
Sbjct: 202 PEYLAP 207
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 64/126 (50%), Gaps = 5/126 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 111
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ L+ L F +S V+H DLKP N+L++ L+DF +A+ + T + T
Sbjct: 112 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVT 169
Query: 591 IGYMAP 596
+ Y AP
Sbjct: 170 LWYRAP 175
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 9/126 (7%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +++++ L+K+ S + +V+EY+P G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 591 IGYMAP 596
Y+AP
Sbjct: 202 PEYLAP 207
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 9/126 (7%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +++++ L+K+ S + +V+EY+P G + +L + R
Sbjct: 84 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQ 142
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + GT
Sbjct: 143 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 194
Query: 591 IGYMAP 596
Y+AP
Sbjct: 195 PEYLAP 200
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 64/126 (50%), Gaps = 5/126 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 111
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ L+ L F +S V+H DLKP N+L++ L+DF +A+ + T + T
Sbjct: 112 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVT 169
Query: 591 IGYMAP 596
+ Y AP
Sbjct: 170 LWYRAP 175
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 64/126 (50%), Gaps = 5/126 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 110
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ L+ L F +S V+H DLKP N+L++ L+DF +A+ + T + T
Sbjct: 111 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVT 168
Query: 591 IGYMAP 596
+ Y AP
Sbjct: 169 LWYRAP 174
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 5/131 (3%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+ F E +MK++ H +++K+I EE +++E P+G L YL + L + +
Sbjct: 70 EKFMSEAVIMKNLDHPHIVKLIGII-EEEPTWIIMELYPYGELGHYLERNKNSLKVLTLV 128
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 585
+ + A+ YL S +H D+ N+L+ L DF +++ + ED
Sbjct: 129 LYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASV 185
Query: 586 QTLGTIGYMAP 596
L I +M+P
Sbjct: 186 TRL-PIKWMSP 195
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 64/126 (50%), Gaps = 5/126 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 110
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ L+ L F +S V+H DLKP N+L++ L+DF +A+ + T + T
Sbjct: 111 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVT 168
Query: 591 IGYMAP 596
+ Y AP
Sbjct: 169 LWYRAP 174
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 6/127 (4%)
Query: 470 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 529
+E +++ + H ++K+ + E L+L+++ G L L S + +
Sbjct: 75 MERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLA 133
Query: 530 DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLG 589
++A AL++LH S +I+ DLKP N+LLD+ L+DF ++K D G
Sbjct: 134 ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCG 188
Query: 590 TIGYMAP 596
T+ YMAP
Sbjct: 189 TVEYMAP 195
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 4/122 (3%)
Query: 467 SFDVECEMMKSIRHRNLIKVISSCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRL 525
F E +MK H N++ ++ C E LV L YM HG L ++ + + +
Sbjct: 136 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 195
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 585
+ VA +++L S +H DL N +LD+ ++DF +A+ + ++
Sbjct: 196 GFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHN 252
Query: 586 QT 587
+T
Sbjct: 253 KT 254
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 6/127 (4%)
Query: 470 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 529
+E +++ + H ++K+ + E L+L+++ G L L S + +
Sbjct: 75 MERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLA 133
Query: 530 DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLG 589
++A AL++LH S +I+ DLKP N+LLD+ L+DF ++K D G
Sbjct: 134 ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCG 188
Query: 590 TIGYMAP 596
T+ YMAP
Sbjct: 189 TVEYMAP 195
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 55/103 (53%), Gaps = 4/103 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++K ++H N++ + E+ LV EY+ L++YL I+++ N+ +
Sbjct: 50 EVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KDLKQYLDDCGNIINMH---NVKLF 105
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAK 573
+ L L + + V+H DLKP N+L+++ L+DF +A+
Sbjct: 106 LFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLAR 148
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 64/135 (47%), Gaps = 9/135 (6%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
K+F E + RH N++ + +C + A++ +L + + +LD+ +
Sbjct: 74 KAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTR 133
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSD---FSIAKLL-TGEDQS 581
I ++ + YLH + ++H DLK NV D+ V ++D FSI+ +L G +
Sbjct: 134 QIAQEIVKGMGYLH---AKGILHKDLKSKNVFYDNGKVV-ITDFGLFSISGVLQAGRRED 189
Query: 582 MTQTQTLGTIGYMAP 596
+ Q G + ++AP
Sbjct: 190 KLRIQN-GWLCHLAP 203
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 6/127 (4%)
Query: 470 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 529
+E +++ + H ++K+ + E L+L+++ G L L S + +
Sbjct: 76 MERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLA 134
Query: 530 DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLG 589
++A AL++LH S +I+ DLKP N+LLD+ L+DF ++K D G
Sbjct: 135 ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCG 189
Query: 590 TIGYMAP 596
T+ YMAP
Sbjct: 190 TVEYMAP 196
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 64/126 (50%), Gaps = 5/126 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 107
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ L+ L F +S V+H DLKP N+L++ L+DF +A+ + T + T
Sbjct: 108 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVT 165
Query: 591 IGYMAP 596
+ Y AP
Sbjct: 166 LWYRAP 171
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 64/126 (50%), Gaps = 5/126 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 109
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ L+ L F +S V+H DLKP N+L++ L+DF +A+ + T + T
Sbjct: 110 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVT 167
Query: 591 IGYMAP 596
+ Y AP
Sbjct: 168 LWYRAP 173
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 64/126 (50%), Gaps = 5/126 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 110
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ L+ L F +S V+H DLKP N+L++ L+DF +A+ + T + T
Sbjct: 111 LFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVT 168
Query: 591 IGYMAP 596
+ Y AP
Sbjct: 169 LWYRAP 174
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 4/122 (3%)
Query: 467 SFDVECEMMKSIRHRNLIKVISSCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRL 525
F E +MK H N++ ++ C E LV L YM HG L ++ + + +
Sbjct: 77 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 136
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 585
+ VA +++L S +H DL N +LD+ ++DF +A+ + ++
Sbjct: 137 GFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHN 193
Query: 586 QT 587
+T
Sbjct: 194 KT 195
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 5/131 (3%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+ F E +MK++ H +++K+I EE +++E P+G L YL + L + +
Sbjct: 58 EKFMSEAVIMKNLDHPHIVKLIGIIE-EEPTWIIMELYPYGELGHYLERNKNSLKVLTLV 116
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 585
+ + A+ YL S +H D+ N+L+ L DF +++ + ED
Sbjct: 117 LYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASV 173
Query: 586 QTLGTIGYMAP 596
L I +M+P
Sbjct: 174 TRL-PIKWMSP 183
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 64/126 (50%), Gaps = 5/126 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 108
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ L+ L F +S V+H DLKP N+L++ L+DF +A+ + T + T
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVT 166
Query: 591 IGYMAP 596
+ Y AP
Sbjct: 167 LWYRAP 172
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 64/126 (50%), Gaps = 5/126 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 108
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ L+ L F +S V+H DLKP N+L++ L+DF +A+ + T + T
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVT 166
Query: 591 IGYMAP 596
+ Y AP
Sbjct: 167 LWYRAP 172
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 4/122 (3%)
Query: 467 SFDVECEMMKSIRHRNLIKVISSCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRL 525
F E +MK H N++ ++ C E LV L YM HG L ++ + + +
Sbjct: 78 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 137
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 585
+ VA +++L S +H DL N +LD+ ++DF +A+ + ++
Sbjct: 138 GFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHN 194
Query: 586 QT 587
+T
Sbjct: 195 KT 196
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 64/126 (50%), Gaps = 5/126 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 107
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ L+ L F +S V+H DLKP N+L++ L+DF +A+ + T + T
Sbjct: 108 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVT 165
Query: 591 IGYMAP 596
+ Y AP
Sbjct: 166 LWYRAP 171
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 6/126 (4%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++K + H N++ +I +E LV E+M L+K L + L Q I I
Sbjct: 69 EISLLKELHHPNIVSLIDVIHSERCLTLVFEFM-EKDLKKVLDENKTGL---QDSQIKIY 124
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ L + + ++H DLKP N+L++ + L+DF +A+ +S T + T
Sbjct: 125 LYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVT 182
Query: 591 IGYMAP 596
+ Y AP
Sbjct: 183 LWYRAP 188
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 64/126 (50%), Gaps = 5/126 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 108
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ L+ L F +S V+H DLKP N+L++ L+DF +A+ + T + T
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVT 166
Query: 591 IGYMAP 596
+ Y AP
Sbjct: 167 LWYRAP 172
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 64/126 (50%), Gaps = 5/126 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 109
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ L+ L F +S V+H DLKP N+L++ L+DF +A+ + T + T
Sbjct: 110 LFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVT 167
Query: 591 IGYMAP 596
+ Y AP
Sbjct: 168 LWYRAP 173
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 64/126 (50%), Gaps = 5/126 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 109
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ L+ L F +S V+H DLKP N+L++ L+DF +A+ + T + T
Sbjct: 110 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVT 167
Query: 591 IGYMAP 596
+ Y AP
Sbjct: 168 LWYRAP 173
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 64/126 (50%), Gaps = 5/126 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 108
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ L+ L F +S V+H DLKP N+L++ L+DF +A+ + T + T
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVT 166
Query: 591 IGYMAP 596
+ Y AP
Sbjct: 167 LWYRAP 172
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 9/126 (7%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +++++ L+K+ S + +V+EY+P G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-----GT 201
Query: 591 IGYMAP 596
Y+AP
Sbjct: 202 PEYLAP 207
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 77/164 (46%), Gaps = 19/164 (11%)
Query: 448 SENNLIGRGGF--------ALFIRAFKSFDVECEMMK-SIRHRNLIKVISSCSNEEFKAL 498
+E ++ RG F + F D E ++++ S H N+I+ + + +F+ +
Sbjct: 36 AEGTIVYRGMFDNRDVAVKRILPECFSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYI 95
Query: 499 VLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLL 558
+E +L++Y+ + + + ++ S L +LH S ++H DLKP N+L+
Sbjct: 96 AIELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH---SLNIVHRDLKPHNILI 151
Query: 559 -----DDNMVAHLSDFSIAKLLTGEDQSMTQTQTL-GTIGYMAP 596
+ A +SDF + K L S ++ + GT G++AP
Sbjct: 152 SMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAP 195
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 72/146 (49%), Gaps = 18/146 (12%)
Query: 466 KSFDVECEMMKS--IRHRNLIKVISS---CSNEEFK-ALVLEYMPHGSLEKYLYSSNCIL 519
+S+ E E+ + ++H NL++ I++ SN E + L+ + GSL YL + I+
Sbjct: 52 QSWQSEREIFSTPGMKHENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYLKGN--II 109
Query: 520 DIFQRLNIMIDVASALEYLHF--------GYSALVIHCDLKPSNVLLDDNMVAHLSDFSI 571
+ ++ ++ L YLH G+ + H D K NVLL ++ A L+DF +
Sbjct: 110 TWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGL 169
Query: 572 A-KLLTGEDQSMTQTQTLGTIGYMAP 596
A + G+ T Q +GT YMAP
Sbjct: 170 AVRFEPGKPPGDTHGQ-VGTRRYMAP 194
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 4/122 (3%)
Query: 467 SFDVECEMMKSIRHRNLIKVISSCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRL 525
F E +MK H N++ ++ C E LV L YM HG L ++ + + +
Sbjct: 82 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 141
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 585
+ VA +++L S +H DL N +LD+ ++DF +A+ + ++
Sbjct: 142 GFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHN 198
Query: 586 QT 587
+T
Sbjct: 199 KT 200
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 4/122 (3%)
Query: 467 SFDVECEMMKSIRHRNLIKVISSCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRL 525
F E +MK H N++ ++ C E LV L YM HG L ++ + + +
Sbjct: 78 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 137
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 585
+ VA +++L S +H DL N +LD+ ++DF +A+ + ++
Sbjct: 138 GFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHN 194
Query: 586 QT 587
+T
Sbjct: 195 KT 196
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 72/143 (50%), Gaps = 23/143 (16%)
Query: 464 AFK--SFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS-----LEKYLYSSN 516
AF+ S + E ++K I+H N++ + + LV++ + G LE+ +Y+
Sbjct: 47 AFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEK 106
Query: 517 CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLL---DDNMVAHLSDFSIAK 573
+ Q+ V SA++YLH ++H DLKP N+L ++N ++DF ++K
Sbjct: 107 DASLVIQQ------VLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSK 157
Query: 574 LLTGEDQSMTQTQTLGTIGYMAP 596
+ +Q+ + GT GY+AP
Sbjct: 158 M----EQNGIMSTACGTPGYVAP 176
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 4/122 (3%)
Query: 467 SFDVECEMMKSIRHRNLIKVISSCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRL 525
F E +MK H N++ ++ C E LV L YM HG L ++ + + +
Sbjct: 77 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 136
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 585
+ VA +++L S +H DL N +LD+ ++DF +A+ + ++
Sbjct: 137 GFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHN 193
Query: 586 QT 587
+T
Sbjct: 194 KT 195
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 63/140 (45%), Gaps = 10/140 (7%)
Query: 460 LFIRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCIL 519
L R F+ + E + + ++H N++++ S E F LV + + G L+
Sbjct: 67 LSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGE----LFEDIVAR 122
Query: 520 DIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDN---MVAHLSDFSIAKLLT 576
+ + + + LE + + +S ++H +LKP N+LL L+DF +A +
Sbjct: 123 EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV- 181
Query: 577 GEDQSMTQTQTLGTIGYMAP 596
+ S GT GY++P
Sbjct: 182 --NDSEAWHGFAGTPGYLSP 199
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 9/133 (6%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKAL--VLEYMPHGSLEKYLYS---SNCILDIFQRL 525
E +++ ++H N+++ + L V+EY G L + LD L
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 526 NIMIDVASALEYLHFGYSA--LVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMT 583
+M + AL+ H V+H DLKP+NV LD L DF +A++L D+
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN-HDEDFA 173
Query: 584 QTQTLGTIGYMAP 596
+ + +GT YM+P
Sbjct: 174 K-EFVGTPYYMSP 185
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 6/126 (4%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++K + H N++ +I +E LV E+M L+K L + L Q I I
Sbjct: 69 EISLLKELHHPNIVSLIDVIHSERCLTLVFEFM-EKDLKKVLDENKTGL---QDSQIKIY 124
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ L + + ++H DLKP N+L++ + L+DF +A+ +S T + T
Sbjct: 125 LYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVT 182
Query: 591 IGYMAP 596
+ Y AP
Sbjct: 183 LWYRAP 188
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 498 LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVL 557
+V+EY+ GSL + + C +D Q + + ALE+LH S VIH D+K N+L
Sbjct: 94 VVMEYLAGGSLTDVV-TETC-MDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNIL 148
Query: 558 LDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
L + L+DF +T E +++ +GT +MAP
Sbjct: 149 LGMDGSVKLTDFGFCAQITPEQSK--RSEMVGTPYWMAP 185
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 5/131 (3%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+ F E +MK++ H +++K+I EE +++E P+G L YL + L + +
Sbjct: 54 EKFMSEAVIMKNLDHPHIVKLIGIIE-EEPTWIIMELYPYGELGHYLERNKNSLKVLTLV 112
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 585
+ + A+ YL S +H D+ N+L+ L DF +++ + ED
Sbjct: 113 LYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASV 169
Query: 586 QTLGTIGYMAP 596
L I +M+P
Sbjct: 170 TRL-PIKWMSP 179
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 474 MMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVAS 533
++K ++H+N++++ +++ LV E+ L+KY S N LD + + +
Sbjct: 54 LLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLK 112
Query: 534 ALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAK 573
L + H S V+H DLKP N+L++ N L+DF +A+
Sbjct: 113 GLGFCH---SRNVLHRDLKPQNLLINRNGELKLADFGLAR 149
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 59/128 (46%), Gaps = 10/128 (7%)
Query: 479 RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 538
+H N++ ++ +C++ ++ EY +G L +L + +L+ I S + L
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLL 167
Query: 539 HF------GYSALV----IHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTL 588
HF G + L IH D+ NVLL + VA + DF +A+ + + + +
Sbjct: 168 HFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 227
Query: 589 GTIGYMAP 596
+ +MAP
Sbjct: 228 LPVKWMAP 235
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 4/122 (3%)
Query: 467 SFDVECEMMKSIRHRNLIKVISSCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRL 525
F E +MK H N++ ++ C E LV L YM HG L ++ + + +
Sbjct: 75 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 134
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 585
+ VA +++L S +H DL N +LD+ ++DF +A+ + ++
Sbjct: 135 GFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHN 191
Query: 586 QT 587
+T
Sbjct: 192 KT 193
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 135/303 (44%), Gaps = 44/303 (14%)
Query: 63 KLYLWGNNFSGTIPRFIFN-ASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTS 121
K L N + T+ + + + L LG+ S G L NL Q+ N LT
Sbjct: 23 KTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGV-----EYLNNLTQINFSNNQLTD 77
Query: 122 STP---------------ELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEE 166
TP +++ ++ L+N +LT + L NN + I P +++NL+R LE
Sbjct: 78 ITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNR-LEL 136
Query: 167 FYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSI 226
+IS +S LT+L +++ GN++ P L L L+RL++ N +
Sbjct: 137 SSNTISDISA-----LSGLTSLQQLNF-GNQVTDLKP--LANLTTLERLDISSNKVS--- 185
Query: 227 PDDICRLAELYRLE--LGSNKLYGSIPACFGNLASLRILSLGSNKLTSIPLTFWNLKDIL 284
DI LA+L LE + +N I G L +L LSL N+L I T +L ++
Sbjct: 186 --DISVLAKLTNLESLIATNNQISDI-TPLGILTNLDELSLNGNQLKDIG-TLASLTNLT 241
Query: 285 QLNFSSNFLTGPLLLEIGNLKVLIGIDFSMNNFSGVIPREIGEKLSYLEDLNLSFNKLKG 344
L+ ++N ++ L + L L + N S + P L+ L +L L+ N+L+
Sbjct: 242 DLDLANNQISN--LAPLSGLTKLTELKLGANQISNISPL---AGLTALTNLELNENQLED 296
Query: 345 EIP 347
P
Sbjct: 297 ISP 299
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 34/161 (21%)
Query: 447 FSENNLIGRGGFALFIRAF----------------KSF-DVECEMMKSIRHRNLIKVI-- 487
+++ +IG G F + +A K+F + E ++M+ + H N++++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHCNIVRLRYF 81
Query: 488 ----SSCSNEEFKALVLEYMP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH- 539
+E + LVL+Y+P + Y + + I+ +L M + +L Y+H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAYIHS 140
Query: 540 FGYSALVIHCDLKPSNVLLD-DNMVAHLSDFSIAK-LLTGE 578
FG + H D+KP N+LLD D V L DF AK L+ GE
Sbjct: 141 FG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 177
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 34/161 (21%)
Query: 447 FSENNLIGRGGFALFIRAF----------------KSF-DVECEMMKSIRHRNLIKVI-- 487
+++ +IG G F + +A K+F + E ++M+ + H N++++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHCNIVRLRYF 81
Query: 488 ----SSCSNEEFKALVLEYMP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH- 539
+E + LVL+Y+P + Y + + I+ +L M + +L Y+H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAYIHS 140
Query: 540 FGYSALVIHCDLKPSNVLLD-DNMVAHLSDFSIAK-LLTGE 578
FG + H D+KP N+LLD D V L DF AK L+ GE
Sbjct: 141 FG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 177
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 34/161 (21%)
Query: 447 FSENNLIGRGGFALFIRAF----------------KSF-DVECEMMKSIRHRNLIKVI-- 487
+++ +IG G F + +A K+F + E ++M+ + H N++++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHCNIVRLRYF 81
Query: 488 ----SSCSNEEFKALVLEYMP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH- 539
+E + LVL+Y+P + Y + + I+ +L M + +L Y+H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAYIHS 140
Query: 540 FGYSALVIHCDLKPSNVLLD-DNMVAHLSDFSIAK-LLTGE 578
FG + H D+KP N+LLD D V L DF AK L+ GE
Sbjct: 141 FG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 177
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 60/133 (45%), Gaps = 9/133 (6%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKAL--VLEYMPHGSLEKYLYS---SNCILDIFQRL 525
E +++ ++H N+++ + L V+EY G L + LD L
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 526 NIMIDVASALEYLHFGYSA--LVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMT 583
+M + AL+ H V+H DLKP+NV LD L DF +A++L D S
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN-HDTSFA 173
Query: 584 QTQTLGTIGYMAP 596
+ +GT YM+P
Sbjct: 174 KA-FVGTPYYMSP 185
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 93/209 (44%), Gaps = 24/209 (11%)
Query: 53 IANVRLPNLEKLYLWGN--NFSGTIPRFIFNASKLSKLSLGMNSFSGFIP--STFGNLRN 108
+ V LP+LE L L N +F G + F + L L L SF+G I S F L
Sbjct: 341 FSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDL---SFNGVITMSSNFLGLEQ 397
Query: 109 LEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNN----PLDGILPKTSISNLSRSL 164
LE L ++ S+ ++S S + ++L +D+S+ +GI S SL
Sbjct: 398 LEHL----DFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLS------SL 447
Query: 165 EEFYMY-NCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILE 223
E M N +P+ + L NL +DL +L P L LQ LN+ N L+
Sbjct: 448 EVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLK 507
Query: 224 GSIPDDIC-RLAELYRLELGSNKLYGSIP 251
S+PD I RL L ++ L +N S P
Sbjct: 508 -SVPDGIFDRLTSLQKIWLHTNPWDCSCP 535
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 184 NLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDN-ILEGSIPDDICRLAELYRLELG 242
+L NL+ +D+ + L L+ L + N E +PD L L L+L
Sbjct: 419 SLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLS 478
Query: 243 SNKLYGSIPACFGNLASLRILSLGSNKLTSIP 274
+L P F +L+SL++L++ SN+L S+P
Sbjct: 479 QCQLEQLSPTAFNSLSSLQVLNMASNQLKSVP 510
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 60/144 (41%), Gaps = 17/144 (11%)
Query: 141 IDLSNNPLDGI-------LPKTSISNLSRSLEEFYMYNCNISGGIPEEISNLTNLVEIDL 193
+DLS NPL + P+ + +LSR + I G + +S+L+ L+ L
Sbjct: 33 LDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ------TIEDGAYQSLSHLSTLI---L 83
Query: 194 GGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKLYG-SIPA 252
GN + L LQ+L + L I L L L + N + +P
Sbjct: 84 TGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPE 143
Query: 253 CFGNLASLRILSLGSNKLTSIPLT 276
F NL +L L L SNK+ SI T
Sbjct: 144 YFSNLTNLEHLDLSSNKIQSIYCT 167
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 67/140 (47%), Gaps = 12/140 (8%)
Query: 461 FIRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL-EKYLYSSNCIL 519
F+ F E E+MKS+ H N+I++ + + LV+E G L E+ ++ +
Sbjct: 63 FVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKR--VF 120
Query: 520 DIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVL-LDDNMVAHLS--DFSIAKLLT 576
IM DV SA+ Y H V H DLKP N L L D+ + L DF +A
Sbjct: 121 RESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF- 176
Query: 577 GEDQSMTQTQTLGTIGYMAP 596
+ M +T+ +GT Y++P
Sbjct: 177 -KPGKMMRTK-VGTPYYVSP 194
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 34/161 (21%)
Query: 447 FSENNLIGRGGFALFIRAF----------------KSF-DVECEMMKSIRHRNLIKVI-- 487
+++ +IG G F + +A K F + E ++M+ + H N++++
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYF 119
Query: 488 ----SSCSNEEFKALVLEYMP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH- 539
+E + LVL+Y+P + Y + + I+ +L M + +L Y+H
Sbjct: 120 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAYIHS 178
Query: 540 FGYSALVIHCDLKPSNVLLD-DNMVAHLSDFSIAK-LLTGE 578
FG + H D+KP N+LLD D V L DF AK L+ GE
Sbjct: 179 FG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 215
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 67/140 (47%), Gaps = 12/140 (8%)
Query: 461 FIRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL-EKYLYSSNCIL 519
F+ F E E+MKS+ H N+I++ + + LV+E G L E+ ++ +
Sbjct: 46 FVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKR--VF 103
Query: 520 DIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVL-LDDNMVAHLS--DFSIAKLLT 576
IM DV SA+ Y H V H DLKP N L L D+ + L DF +A
Sbjct: 104 RESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF- 159
Query: 577 GEDQSMTQTQTLGTIGYMAP 596
+ M +T+ +GT Y++P
Sbjct: 160 -KPGKMMRTK-VGTPYYVSP 177
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 58/126 (46%), Gaps = 9/126 (7%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +++++ L+K+ S + +V+EY P G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ EYLH S +I+ DLKP N+++D ++DF +AK + G + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLC-----GT 201
Query: 591 IGYMAP 596
Y+AP
Sbjct: 202 PEYLAP 207
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 58/114 (50%), Gaps = 6/114 (5%)
Query: 483 LIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGY 542
++++ + ++ + +V+EYMP G L L S+ + + + R +V AL+ +H
Sbjct: 131 VVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARF-YTAEVVLALDAIH--- 185
Query: 543 SALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
S IH D+KP N+LLD + L+DF + E T +GT Y++P
Sbjct: 186 SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT-AVGTPDYISP 238
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 135/303 (44%), Gaps = 44/303 (14%)
Query: 63 KLYLWGNNFSGTIPRFIFN-ASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTS 121
K L N + T+ + + + L LG+ S G L NL Q+ N LT
Sbjct: 23 KTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGV-----EYLNNLTQINFSNNQLTD 77
Query: 122 STP---------------ELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEE 166
TP +++ ++ L+N +LT + L NN + I P +++NL+R LE
Sbjct: 78 ITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNR-LEL 136
Query: 167 FYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSI 226
+IS +S LT+L +++ GN++ P L L L+RL++ N +
Sbjct: 137 SSNTISDISA-----LSGLTSLQQLNF-GNQVTDLKP--LANLTTLERLDISSNKVS--- 185
Query: 227 PDDICRLAELYRLE--LGSNKLYGSIPACFGNLASLRILSLGSNKLTSIPLTFWNLKDIL 284
DI LA+L LE + +N I G L +L LSL N+L I T +L ++
Sbjct: 186 --DISVLAKLTNLESLIATNNQISDI-TPLGILTNLDELSLNGNQLKDIG-TLASLTNLT 241
Query: 285 QLNFSSNFLTGPLLLEIGNLKVLIGIDFSMNNFSGVIPREIGEKLSYLEDLNLSFNKLKG 344
L+ ++N ++ L + L L + N S + P L+ L +L L+ N+L+
Sbjct: 242 DLDLANNQISN--LAPLSGLTKLTELKLGANQISNISPL---AGLTALTNLELNENQLED 296
Query: 345 EIP 347
P
Sbjct: 297 ISP 299
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 58/114 (50%), Gaps = 6/114 (5%)
Query: 483 LIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGY 542
++++ + ++ + +V+EYMP G L L S+ + + + R +V AL+ +H
Sbjct: 136 VVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARF-YTAEVVLALDAIH--- 190
Query: 543 SALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
S IH D+KP N+LLD + L+DF + E T +GT Y++P
Sbjct: 191 SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT-AVGTPDYISP 243
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +++++ L+K+ S + +V+EY P G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-YAAQ 149
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ EYLH S +I+ DLKP N+++D ++DF AK + G + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GT 201
Query: 591 IGYMAP 596
Y+AP
Sbjct: 202 PEYLAP 207
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 34/161 (21%)
Query: 447 FSENNLIGRGGFALFIRAF----------------KSF-DVECEMMKSIRHRNLIKVI-- 487
+++ +IG G F + +A K F + E ++M+ + H N++++
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYF 115
Query: 488 ----SSCSNEEFKALVLEYMP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH- 539
+E + LVL+Y+P + Y + + I+ +L M + +L Y+H
Sbjct: 116 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAYIHS 174
Query: 540 FGYSALVIHCDLKPSNVLLD-DNMVAHLSDFSIAK-LLTGE 578
FG + H D+KP N+LLD D V L DF AK L+ GE
Sbjct: 175 FG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 211
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 34/161 (21%)
Query: 447 FSENNLIGRGGFALFIRAF----------------KSF-DVECEMMKSIRHRNLIKVI-- 487
+++ +IG G F + +A K F + E ++M+ + H N++++
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYF 160
Query: 488 ----SSCSNEEFKALVLEYMP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH- 539
+E + LVL+Y+P + Y + + I+ +L M + +L Y+H
Sbjct: 161 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAYIHS 219
Query: 540 FGYSALVIHCDLKPSNVLLD-DNMVAHLSDFSIAK-LLTGE 578
FG + H D+KP N+LLD D V L DF AK L+ GE
Sbjct: 220 FG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 256
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 58/114 (50%), Gaps = 6/114 (5%)
Query: 483 LIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGY 542
++++ + ++ + +V+EYMP G L L S+ + + + R +V AL+ +H
Sbjct: 136 VVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARF-YTAEVVLALDAIH--- 190
Query: 543 SALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
S IH D+KP N+LLD + L+DF + E T +GT Y++P
Sbjct: 191 SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT-AVGTPDYISP 243
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 9/126 (7%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E + +++ L+K+ S + +VLEY P G + +L + R
Sbjct: 92 EKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARF-YAAQ 150
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + GT
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-----GT 202
Query: 591 IGYMAP 596
Y+AP
Sbjct: 203 PEYLAP 208
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 34/161 (21%)
Query: 447 FSENNLIGRGGFALFIRAF----------------KSF-DVECEMMKSIRHRNLIKVI-- 487
+++ +IG G F + +A K F + E ++M+ + H N++++
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYF 117
Query: 488 ----SSCSNEEFKALVLEYMP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH- 539
+E + LVL+Y+P + Y + + I+ +L M + +L Y+H
Sbjct: 118 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAYIHS 176
Query: 540 FGYSALVIHCDLKPSNVLLD-DNMVAHLSDFSIAK-LLTGE 578
FG + H D+KP N+LLD D V L DF AK L+ GE
Sbjct: 177 FG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 213
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 34/161 (21%)
Query: 447 FSENNLIGRGGFALFIRAF----------------KSF-DVECEMMKSIRHRNLIKVI-- 487
+++ +IG G F + +A K F + E ++M+ + H N++++
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYF 86
Query: 488 ----SSCSNEEFKALVLEYMP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH- 539
+E + LVL+Y+P + Y + + I+ +L M + +L Y+H
Sbjct: 87 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAYIHS 145
Query: 540 FGYSALVIHCDLKPSNVLLD-DNMVAHLSDFSIAK-LLTGE 578
FG + H D+KP N+LLD D V L DF AK L+ GE
Sbjct: 146 FG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 182
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Query: 470 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 529
+E +++ + H ++K+ + E L+L+++ G L L S + +
Sbjct: 79 MERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLA 137
Query: 530 DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLG 589
++A L++LH S +I+ DLKP N+LLD+ L+DF ++K D G
Sbjct: 138 ELALGLDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK--EAIDHEKKAYSFCG 192
Query: 590 TIGYMAP 596
T+ YMAP
Sbjct: 193 TVEYMAP 199
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 34/161 (21%)
Query: 447 FSENNLIGRGGFALFIRAF----------------KSF-DVECEMMKSIRHRNLIKVI-- 487
+++ +IG G F + +A K F + E ++M+ + H N++++
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYF 115
Query: 488 ----SSCSNEEFKALVLEYMP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH- 539
+E + LVL+Y+P + Y + + I+ +L M + +L Y+H
Sbjct: 116 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAYIHS 174
Query: 540 FGYSALVIHCDLKPSNVLLD-DNMVAHLSDFSIAK-LLTGE 578
FG + H D+KP N+LLD D V L DF AK L+ GE
Sbjct: 175 FG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 211
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 535 LEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYM 594
LE +H + ++H DLKP+N L+ D M+ L DF IA + + + + +GT+ YM
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDXXXVVKDSQVGTVNYM 195
Query: 595 AP 596
P
Sbjct: 196 PP 197
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +++++ L+K+ S + +V+EY P G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ EYLH S +I+ DLKP N+++D ++DF AK + G + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 591 IGYMAP 596
Y+AP
Sbjct: 202 PEYLAP 207
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 63/140 (45%), Gaps = 10/140 (7%)
Query: 460 LFIRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCIL 519
L R F+ + E + + ++H N++++ S E F LV + + G L+
Sbjct: 44 LSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGE----LFEDIVAR 99
Query: 520 DIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDN---MVAHLSDFSIAKLLT 576
+ + + + LE + + +S ++H +LKP N+LL L+DF +A +
Sbjct: 100 EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV- 158
Query: 577 GEDQSMTQTQTLGTIGYMAP 596
+ S GT GY++P
Sbjct: 159 --NDSEAWHGFAGTPGYLSP 176
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 34/161 (21%)
Query: 447 FSENNLIGRGGFALFIRAF----------------KSF-DVECEMMKSIRHRNLIKVI-- 487
+++ +IG G F + +A K F + E ++M+ + H N++++
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYF 109
Query: 488 ----SSCSNEEFKALVLEYMP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH- 539
+E + LVL+Y+P + Y + + I+ +L M + +L Y+H
Sbjct: 110 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAYIHS 168
Query: 540 FGYSALVIHCDLKPSNVLLD-DNMVAHLSDFSIAK-LLTGE 578
FG + H D+KP N+LLD D V L DF AK L+ GE
Sbjct: 169 FG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 205
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 535 LEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYM 594
LE +H + ++H DLKP+N L+ D M+ L DF IA + + S+ + +G + YM
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGAVNYM 223
Query: 595 AP 596
P
Sbjct: 224 PP 225
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 64/126 (50%), Gaps = 5/126 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++K + H N++K++ E LV E++ H L+ ++ ++ + I L I
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEHV-HQDLKTFM-DASALTGIPLPL-IKSY 107
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ L+ L F +S V+H DLKP N+L++ L+DF +A+ + T T + T
Sbjct: 108 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVT 165
Query: 591 IGYMAP 596
+ Y AP
Sbjct: 166 LWYRAP 171
>pdb|2O6S|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
pdb|2O6S|B Chain B, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
Length = 208
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 185 LTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDIC-RLAELYRLELGS 243
LT+L ++ LGGNKL KL L LNL N L+ S+P+ + +L +L L L +
Sbjct: 51 LTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQ-SLPNGVFDKLTQLKELALNT 109
Query: 244 NKLYGSIPACFGNLASLRILSLGSNKLTSIP 274
N+L F L L+ L L N+L S+P
Sbjct: 110 NQLQSLPDGVFDKLTQLKDLRLYQNQLKSVP 140
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
Query: 225 SIPDDICRLAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSIPLTFWN-LKDI 283
S+P I A+ L+L +N L F L SL L LG NKL S+P +N L +
Sbjct: 21 SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSL 78
Query: 284 LQLNFSSNFLTGPLLLEIGNLKVLIGIDFSMNNFSGVIPREIGEKLSYLEDLNLSFNKLK 343
LN S+N L L L + + N +P + +KL+ L+DL L N+LK
Sbjct: 79 TYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQS-LPDGVFDKLTQLKDLRLYQNQLK 137
Query: 344 GEIPRG 349
+P G
Sbjct: 138 -SVPDG 142
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 8/113 (7%)
Query: 163 SLEEFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNIL 222
++E + ++ GIP + + L DL N L +L L +L L N L
Sbjct: 11 TVECYSQGRTSVPTGIPAQTTYL------DLETNSLKSLPNGVFDELTSLTQLYLGGNKL 64
Query: 223 EGSIPDDIC-RLAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSIP 274
+ S+P+ + +L L L L +N+L F L L+ L+L +N+L S+P
Sbjct: 65 Q-SLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLP 116
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 57 RLPNLEKLYLWGNNFSGTIPRFIFNA-SKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLD 115
L +L +LYL GN ++P +FN + L+ L+L N F L L++L L+
Sbjct: 50 ELTSLTQLYLGGNKLQ-SLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALN 108
Query: 116 ENYLTS 121
N L S
Sbjct: 109 TNQLQS 114
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 34/161 (21%)
Query: 447 FSENNLIGRGGFALFIRAF----------------KSF-DVECEMMKSIRHRNLIKVI-- 487
+++ +IG G F + +A K F + E ++M+ + H N++++
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYF 89
Query: 488 ----SSCSNEEFKALVLEYMP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH- 539
+E + LVL+Y+P + Y + + I+ +L M + +L Y+H
Sbjct: 90 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAYIHS 148
Query: 540 FGYSALVIHCDLKPSNVLLD-DNMVAHLSDFSIAK-LLTGE 578
FG + H D+KP N+LLD D V L DF AK L+ GE
Sbjct: 149 FG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 185
>pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr)
Rbc36 In Complex With H-Trisaccharide
Length = 229
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 79/181 (43%), Gaps = 41/181 (22%)
Query: 175 SGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNI---LEGSIPDDIC 231
S P + S V+ +K + S+P G Q L L DN LE + D +
Sbjct: 10 SAACPSQCSCSGTTVDCR---SKRHASVPA--GIPTNAQILYLHDNQITKLEPGVFDSLI 64
Query: 232 RLAELYRLELGSNKLYGSIP-ACFGNLASLRILSLGSNKLTSIP-LTFWNLKDILQLNFS 289
L ELY LGSN+L G++P F +L L +L LG+N+LT +P F L + +L
Sbjct: 65 NLKELY---LGSNQL-GALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMC 120
Query: 290 SNFLTGPLLLEIGNLKVLIGIDFSMNNFSGVIPREIGEKLSYLEDLNLSFNKLKGEIPRG 349
N LT +PR I E+L++L L L N+LK IP G
Sbjct: 121 CNKLTE-------------------------LPRGI-ERLTHLTHLALDQNQLK-SIPHG 153
Query: 350 G 350
Sbjct: 154 A 154
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 9/112 (8%)
Query: 167 FYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPI-TLGKLRKLQRLNLEDN---IL 222
Y+++ I+ P +L NL E+ LG N+L G++P+ L +L L+L N +L
Sbjct: 45 LYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGVFDSLTQLTVLDLGTNQLTVL 103
Query: 223 EGSIPDDICRLAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSIP 274
++ D + L EL+ + NKL +P L L L+L N+L SIP
Sbjct: 104 PSAVFDRLVHLKELF---MCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIP 151
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 10/112 (8%)
Query: 60 NLEKLYLWGNNFSGTIPRFIFNA-SKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENY 118
NL++LYL G+N G +P +F++ ++L+ L LG N + + F L +L++L + N
Sbjct: 65 NLKELYL-GSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNK 123
Query: 119 LTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEEFYMY 170
LT + L+ L++ + L N L I P + LS SL Y++
Sbjct: 124 LTELPRGIERLTHLTH------LALDQNQLKSI-PHGAFDRLS-SLTHAYLF 167
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 34/161 (21%)
Query: 447 FSENNLIGRGGFALFIRAF----------------KSF-DVECEMMKSIRHRNLIKVI-- 487
+++ +IG G F + +A K F + E ++M+ + H N++++
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYF 94
Query: 488 ----SSCSNEEFKALVLEYMP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH- 539
+E + LVL+Y+P + Y + + I+ +L M + +L Y+H
Sbjct: 95 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAYIHS 153
Query: 540 FGYSALVIHCDLKPSNVLLD-DNMVAHLSDFSIAK-LLTGE 578
FG + H D+KP N+LLD D V L DF AK L+ GE
Sbjct: 154 FG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 190
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 34/161 (21%)
Query: 447 FSENNLIGRGGFALFIRAF----------------KSF-DVECEMMKSIRHRNLIKVI-- 487
+++ +IG G F + +A K F + E ++M+ + H N++++
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYF 100
Query: 488 ----SSCSNEEFKALVLEYMP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH- 539
+E + LVL+Y+P + Y + + I+ +L M + +L Y+H
Sbjct: 101 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAYIHS 159
Query: 540 FGYSALVIHCDLKPSNVLLD-DNMVAHLSDFSIAK-LLTGE 578
FG + H D+KP N+LLD D V L DF AK L+ GE
Sbjct: 160 FG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 196
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 134/303 (44%), Gaps = 44/303 (14%)
Query: 63 KLYLWGNNFSGTIPRFIFN-ASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTS 121
K L N + T+ + + + L LG+ S G L NL Q+ N LT
Sbjct: 27 KTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGV-----EYLNNLTQINFSNNQLTD 81
Query: 122 STP---------------ELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEE 166
TP +++ ++ L+N +LT + L NN + I P +++NL+R LE
Sbjct: 82 ITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNR-LEL 140
Query: 167 FYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSI 226
+IS +S LT+L ++ GN++ P L L L+RL++ N +
Sbjct: 141 SSNTISDISA-----LSGLTSLQQLSF-GNQVTDLKP--LANLTTLERLDISSNKVS--- 189
Query: 227 PDDICRLAELYRLE--LGSNKLYGSIPACFGNLASLRILSLGSNKLTSIPLTFWNLKDIL 284
DI LA+L LE + +N I G L +L LSL N+L I T +L ++
Sbjct: 190 --DISVLAKLTNLESLIATNNQISDI-TPLGILTNLDELSLNGNQLKDIG-TLASLTNLT 245
Query: 285 QLNFSSNFLTGPLLLEIGNLKVLIGIDFSMNNFSGVIPREIGEKLSYLEDLNLSFNKLKG 344
L+ ++N ++ L + L L + N S + P L+ L +L L+ N+L+
Sbjct: 246 DLDLANNQISN--LAPLSGLTKLTELKLGANQISNISPL---AGLTALTNLELNENQLED 300
Query: 345 EIP 347
P
Sbjct: 301 ISP 303
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 63/152 (41%), Gaps = 26/152 (17%)
Query: 468 FDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSN----C------ 517
F E +M + N++K++ C+ + L+ EYM +G L ++L S + C
Sbjct: 97 FQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSD 156
Query: 518 -------------ILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVA 564
L ++L I VA+ + YL +H DL N L+ +NMV
Sbjct: 157 LSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVV 213
Query: 565 HLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
++DF +++ + D I +M P
Sbjct: 214 KIADFGLSRNIYSADYYKADGNDAIPIRWMPP 245
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 34/161 (21%)
Query: 447 FSENNLIGRGGFALFIRAF----------------KSF-DVECEMMKSIRHRNLIKVI-- 487
+++ +IG G F + +A K F + E ++M+ + H N++++
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYF 93
Query: 488 ----SSCSNEEFKALVLEYMP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH- 539
+E + LVL+Y+P + Y + + I+ +L M + +L Y+H
Sbjct: 94 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAYIHS 152
Query: 540 FGYSALVIHCDLKPSNVLLD-DNMVAHLSDFSIAK-LLTGE 578
FG + H D+KP N+LLD D V L DF AK L+ GE
Sbjct: 153 FG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 189
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 58/126 (46%), Gaps = 9/126 (7%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +++++ L+K+ S + +V+EY P G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ EYLH S +I+ DLKP N+++D ++DF +AK + G + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLC-----GT 201
Query: 591 IGYMAP 596
Y+AP
Sbjct: 202 PEYLAP 207
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 134/303 (44%), Gaps = 44/303 (14%)
Query: 63 KLYLWGNNFSGTIPRFIFN-ASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTS 121
K L N + T+ + + + L LG+ S G L NL Q+ N LT
Sbjct: 28 KTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGV-----EYLNNLTQINFSNNQLTD 82
Query: 122 STP---------------ELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEE 166
TP +++ ++ L+N +LT + L NN + I P +++NL+R LE
Sbjct: 83 ITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNR-LEL 141
Query: 167 FYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSI 226
+IS +S LT+L ++ GN++ P L L L+RL++ N +
Sbjct: 142 SSNTISDISA-----LSGLTSLQQLSF-GNQVTDLKP--LANLTTLERLDISSNKVS--- 190
Query: 227 PDDICRLAELYRLE--LGSNKLYGSIPACFGNLASLRILSLGSNKLTSIPLTFWNLKDIL 284
DI LA+L LE + +N I G L +L LSL N+L I T +L ++
Sbjct: 191 --DISVLAKLTNLESLIATNNQISDI-TPLGILTNLDELSLNGNQLKDIG-TLASLTNLT 246
Query: 285 QLNFSSNFLTGPLLLEIGNLKVLIGIDFSMNNFSGVIPREIGEKLSYLEDLNLSFNKLKG 344
L+ ++N ++ L + L L + N S + P L+ L +L L+ N+L+
Sbjct: 247 DLDLANNQISN--LAPLSGLTKLTELKLGANQISNISPL---AGLTALTNLELNENQLED 301
Query: 345 EIP 347
P
Sbjct: 302 ISP 304
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 34/161 (21%)
Query: 447 FSENNLIGRGGFALFIRAF----------------KSF-DVECEMMKSIRHRNLIKVI-- 487
+++ +IG G F + +A K F + E ++M+ + H N++++
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYF 93
Query: 488 ----SSCSNEEFKALVLEYMP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH- 539
+E + LVL+Y+P + Y + + I+ +L M + +L Y+H
Sbjct: 94 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAYIHS 152
Query: 540 FGYSALVIHCDLKPSNVLLD-DNMVAHLSDFSIAK-LLTGE 578
FG + H D+KP N+LLD D V L DF AK L+ GE
Sbjct: 153 FG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 189
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 9/140 (6%)
Query: 460 LFIRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCIL 519
L R + + E + + ++H N++++ S S E L+ + + G L+
Sbjct: 60 LSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGE----LFEDIVAR 115
Query: 520 DIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNM---VAHLSDFSIAKLLT 576
+ + + + LE + + V+H DLKP N+LL + L+DF +A +
Sbjct: 116 EYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVE 175
Query: 577 GEDQSMTQTQTLGTIGYMAP 596
GE Q+ GT GY++P
Sbjct: 176 GEQQAWFGFA--GTPGYLSP 193
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 34/161 (21%)
Query: 447 FSENNLIGRGGFALFIRAF----------------KSF-DVECEMMKSIRHRNLIKVI-- 487
+++ +IG G F + +A K F + E ++M+ + H N++++
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYF 85
Query: 488 ----SSCSNEEFKALVLEYMP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH- 539
+E + LVL+Y+P + Y + + I+ +L M + +L Y+H
Sbjct: 86 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAYIHS 144
Query: 540 FGYSALVIHCDLKPSNVLLD-DNMVAHLSDFSIAK-LLTGE 578
FG + H D+KP N+LLD D V L DF AK L+ GE
Sbjct: 145 FG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 181
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Query: 498 LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVL 557
+V+EY+ GSL + + C +D Q + + ALE+LH S VIH D+K N+L
Sbjct: 94 VVMEYLAGGSLTDVV-TETC-MDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNIL 148
Query: 558 LDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
L + L+DF +T E ++ +GT +MAP
Sbjct: 149 LGMDGSVKLTDFGFCAQITPEQSK--RSXMVGTPYWMAP 185
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 498 LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVL 557
+V+EY+ GSL + + C +D Q + + ALE+LH S VIH D+K N+L
Sbjct: 94 VVMEYLAGGSLTDVV-TETC-MDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNIL 148
Query: 558 LDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
L + L+DF +T E QS T +GT +MAP
Sbjct: 149 LGMDGSVKLTDFGFCAQITPE-QSKRST-MVGTPYWMAP 185
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Query: 498 LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVL 557
+V+EY+ GSL + + C +D Q + + ALE+LH S VIH D+K N+L
Sbjct: 95 VVMEYLAGGSLTDVV-TETC-MDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNIL 149
Query: 558 LDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
L + L+DF +T E ++ +GT +MAP
Sbjct: 150 LGMDGSVKLTDFGFCAQITPEQSK--RSXMVGTPYWMAP 186
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 585
I + + ALE+LH S VIH D+KPSNVL++ + DF I+ L S+ +T
Sbjct: 157 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLV---DSVAKT 211
Query: 586 QTLGTIGYMAP 596
G YMAP
Sbjct: 212 IDAGCKPYMAP 222
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 34/161 (21%)
Query: 447 FSENNLIGRGGFALFIRAF----------------KSF-DVECEMMKSIRHRNLIKVI-- 487
+++ +IG G F + +A K F + E ++M+ + H N++++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYF 81
Query: 488 ----SSCSNEEFKALVLEYMP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH- 539
+E + LVL+Y+P + Y + + I+ +L M + +L Y+H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAYIHS 140
Query: 540 FGYSALVIHCDLKPSNVLLD-DNMVAHLSDFSIAK-LLTGE 578
FG + H D+KP N+LLD D V L DF AK L+ GE
Sbjct: 141 FG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 177
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 34/161 (21%)
Query: 447 FSENNLIGRGGFALFIRAF----------------KSF-DVECEMMKSIRHRNLIKVI-- 487
+++ +IG G F + +A K F + E ++M+ + H N++++
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYF 82
Query: 488 ----SSCSNEEFKALVLEYMP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH- 539
+E + LVL+Y+P + Y + + I+ +L M + +L Y+H
Sbjct: 83 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAYIHS 141
Query: 540 FGYSALVIHCDLKPSNVLLD-DNMVAHLSDFSIAK-LLTGE 578
FG + H D+KP N+LLD D V L DF AK L+ GE
Sbjct: 142 FG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 178
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 34/161 (21%)
Query: 447 FSENNLIGRGGFALFIRAF----------------KSF-DVECEMMKSIRHRNLIKVI-- 487
+++ +IG G F + +A K F + E ++M+ + H N++++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYF 81
Query: 488 ----SSCSNEEFKALVLEYMP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH- 539
+E + LVL+Y+P + Y + + I+ +L M + +L Y+H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAYIHS 140
Query: 540 FGYSALVIHCDLKPSNVLLD-DNMVAHLSDFSIAK-LLTGE 578
FG + H D+KP N+LLD D V L DF AK L+ GE
Sbjct: 141 FG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 177
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +++++ L+K+ S + +V+EY P G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ EYLH S +I+ DLKP N+++D ++DF AK + G + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GT 201
Query: 591 IGYMAP 596
Y+AP
Sbjct: 202 PEYLAP 207
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 34/161 (21%)
Query: 447 FSENNLIGRGGFALFIRAF----------------KSF-DVECEMMKSIRHRNLIKVI-- 487
+++ +IG G F + +A K F + E ++M+ + H N++++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYF 81
Query: 488 ----SSCSNEEFKALVLEYMP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH- 539
+E + LVL+Y+P + Y + + I+ +L M + +L Y+H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAYIHS 140
Query: 540 FGYSALVIHCDLKPSNVLLD-DNMVAHLSDFSIAK-LLTGE 578
FG + H D+KP N+LLD D V L DF AK L+ GE
Sbjct: 141 FG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 177
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +++++ L+K+ S + +V+EY P G + +L + R
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQ 150
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ EYLH S +I+ DLKP N+++D ++DF AK + G + GT
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GT 202
Query: 591 IGYMAP 596
Y+AP
Sbjct: 203 PEYLAP 208
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 8/129 (6%)
Query: 470 VECEMMKSIRHRNLIKVISSCSNEEFK-ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIM 528
E ++++ IR + + E K L+L+Y+ G L +L + + I
Sbjct: 107 TERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTE--HEVQIY 164
Query: 529 I-DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQT 587
+ ++ ALE+LH +I+ D+K N+LLD N L+DF ++K D++
Sbjct: 165 VGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVA-DETERAYDF 220
Query: 588 LGTIGYMAP 596
GTI YMAP
Sbjct: 221 CGTIEYMAP 229
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 9/99 (9%)
Query: 498 LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVL 557
+V+EY P G + +L + R + EYLH S +I+ DLKP N++
Sbjct: 119 MVMEYAPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLM 174
Query: 558 LDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
+D ++DF AK + G + GT Y+AP
Sbjct: 175 IDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAP 208
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 63/140 (45%), Gaps = 10/140 (7%)
Query: 460 LFIRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCIL 519
L R F+ + E + + ++H N++++ S E F LV + + G L+
Sbjct: 44 LSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGE----LFEDIVAR 99
Query: 520 DIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDN---MVAHLSDFSIAKLLT 576
+ + + + LE + + +S ++H +LKP N+LL L+DF +A +
Sbjct: 100 EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV- 158
Query: 577 GEDQSMTQTQTLGTIGYMAP 596
+ S GT GY++P
Sbjct: 159 --NDSEAWHGFAGTPGYLSP 176
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 60/133 (45%), Gaps = 4/133 (3%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 522
+A K E +M S+ + ++ +++ C + L+++ MP G L Y+ +
Sbjct: 63 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQ 121
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582
LN + +A + YL ++H DL NVL+ ++DF +AKLL E++
Sbjct: 122 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 178
Query: 583 TQTQTLGTIGYMA 595
I +MA
Sbjct: 179 HAEGGKVPIKWMA 191
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 63/127 (49%), Gaps = 6/127 (4%)
Query: 470 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 529
E +++ ++H ++ +I + L+LEY+ G L L ++ +
Sbjct: 70 AERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACF-YLA 128
Query: 530 DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLG 589
+++ AL +LH +I+ DLKP N++L+ L+DF + K + D ++T T G
Sbjct: 129 EISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCK-ESIHDGTVTHT-FCG 183
Query: 590 TIGYMAP 596
TI YMAP
Sbjct: 184 TIEYMAP 190
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 11/135 (8%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+ + E +++ IRH N+I + N+ L+LE + G L +L + + +
Sbjct: 74 EEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTED-EAT 132
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAH----LSDFSIAKLLTGEDQS 581
+ + + YLH S + H DLKP N++L D V + L DF IA + ++
Sbjct: 133 QFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF 189
Query: 582 MTQTQTLGTIGYMAP 596
GT ++AP
Sbjct: 190 ---KNIFGTPEFVAP 201
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 63/140 (45%), Gaps = 10/140 (7%)
Query: 460 LFIRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCIL 519
L R F+ + E + + ++H N++++ S E F LV + + G L+
Sbjct: 43 LSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGE----LFEDIVAR 98
Query: 520 DIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDN---MVAHLSDFSIAKLLT 576
+ + + + LE + + +S ++H +LKP N+LL L+DF +A +
Sbjct: 99 EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV- 157
Query: 577 GEDQSMTQTQTLGTIGYMAP 596
+ S GT GY++P
Sbjct: 158 --NDSEAWHGFAGTPGYLSP 175
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 12/132 (9%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI- 529
E +++ RH N+I + +A+ Y+ +E LY +L Q N I
Sbjct: 91 EIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYK---LLKSQQLSNDHIC 147
Query: 530 ----DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE-DQSMTQ 584
+ L+Y+H SA V+H DLKPSN+L++ + DF +A++ E D +
Sbjct: 148 YFLYQILRGLKYIH---SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFL 204
Query: 585 TQTLGTIGYMAP 596
T+ + T Y AP
Sbjct: 205 TEXVATRWYRAP 216
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 60/133 (45%), Gaps = 4/133 (3%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 522
+A K E +M S+ + ++ +++ C + L+++ MP G L Y+ +
Sbjct: 60 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQ 118
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582
LN + +A + YL ++H DL NVL+ ++DF +AKLL E++
Sbjct: 119 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 175
Query: 583 TQTQTLGTIGYMA 595
I +MA
Sbjct: 176 HAEGGKVPIKWMA 188
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 60/133 (45%), Gaps = 4/133 (3%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 522
+A K E +M S+ + ++ +++ C + L+++ MP G L Y+ +
Sbjct: 61 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQ 119
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582
LN + +A + YL ++H DL NVL+ ++DF +AKLL E++
Sbjct: 120 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 176
Query: 583 TQTQTLGTIGYMA 595
I +MA
Sbjct: 177 HAEGGKVPIKWMA 189
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 60/133 (45%), Gaps = 4/133 (3%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 522
+A K E +M S+ + ++ +++ C + L+++ MP G L Y+ +
Sbjct: 62 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQ 120
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582
LN + +A + YL ++H DL NVL+ ++DF +AKLL E++
Sbjct: 121 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 177
Query: 583 TQTQTLGTIGYMA 595
I +MA
Sbjct: 178 HAEGGKVPIKWMA 190
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 11/135 (8%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+ + E +++ IRH N+I + N+ L+LE + G L +L + + +
Sbjct: 60 EEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTED-EAT 118
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAH----LSDFSIAKLLTGEDQS 581
+ + + YLH S + H DLKP N++L D V + L DF IA + ++
Sbjct: 119 QFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF 175
Query: 582 MTQTQTLGTIGYMAP 596
GT ++AP
Sbjct: 176 ---KNIFGTPEFVAP 187
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 11/135 (8%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+ + E +++ IRH N+I + N+ L+LE + G L +L + + +
Sbjct: 53 EEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTED-EAT 111
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAH----LSDFSIAKLLTGEDQS 581
+ + + YLH S + H DLKP N++L D V + L DF IA + ++
Sbjct: 112 QFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF 168
Query: 582 MTQTQTLGTIGYMAP 596
GT ++AP
Sbjct: 169 ---KNIFGTPEFVAP 180
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 63/126 (50%), Gaps = 5/126 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++K + H N++K++ E LV E++ H L+ ++ ++ + I L I
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFM-DASALTGIPLPL-IKSY 111
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ L+ L F +S V+H DLKP N+L++ L+DF +A+ + T + T
Sbjct: 112 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVT 169
Query: 591 IGYMAP 596
+ Y AP
Sbjct: 170 LWYRAP 175
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 60/133 (45%), Gaps = 4/133 (3%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 522
+A K E +M S+ + ++ +++ C + L+++ MP G L Y+ +
Sbjct: 66 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQ 124
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582
LN + +A + YL ++H DL NVL+ ++DF +AKLL E++
Sbjct: 125 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 181
Query: 583 TQTQTLGTIGYMA 595
I +MA
Sbjct: 182 HAEGGKVPIKWMA 194
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 19/113 (16%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNC----------ILD 520
E +MK ++H N++++ E LV E+M L+KY+ S ++
Sbjct: 53 EISLMKELKHENIVRLYDVIHTENKLTLVFEFM-DNDLKKYMDSRTVGNTPRGLELNLVK 111
Query: 521 IFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAK 573
FQ L+ L F + ++H DLKP N+L++ L DF +A+
Sbjct: 112 YFQ--------WQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLAR 156
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 60/133 (45%), Gaps = 4/133 (3%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 522
+A K E +M S+ + ++ +++ C + L+++ MP G L Y+ +
Sbjct: 60 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQ 118
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582
LN + +A + YL ++H DL NVL+ ++DF +AKLL E++
Sbjct: 119 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 175
Query: 583 TQTQTLGTIGYMA 595
I +MA
Sbjct: 176 HAEGGKVPIKWMA 188
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 60/133 (45%), Gaps = 4/133 (3%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 522
+A K E +M S+ + ++ +++ C + L+++ MP G L Y+ +
Sbjct: 59 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQ 117
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582
LN + +A + YL ++H DL NVL+ ++DF +AKLL E++
Sbjct: 118 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 174
Query: 583 TQTQTLGTIGYMA 595
I +MA
Sbjct: 175 HAEGGKVPIKWMA 187
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 62/115 (53%), Gaps = 8/115 (6%)
Query: 483 LIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGY 542
++++ + ++++ +V+EYMP G L L S+ + + + + +V AL+ +H
Sbjct: 137 VVQLFCAFQDDKYLYMVMEYMPGGDLVN-LMSNYDVPEKWAKF-YTAEVVLALDAIH--- 191
Query: 543 SALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQT-LGTIGYMAP 596
S +IH D+KP N+LLD + L+DF + ++ M T +GT Y++P
Sbjct: 192 SMGLIHRDVKPDNMLLDKHGHLKLADFGTC--MKMDETGMVHCDTAVGTPDYISP 244
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 71/143 (49%), Gaps = 14/143 (9%)
Query: 458 FALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSNEEFKALVLEYMPHGSLEKYLY 513
F I A +++ E ++K ++H N+I ++ + S E+F + L G+ +
Sbjct: 65 FQSLIHARRTYR-ELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIV 123
Query: 514 SSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAK 573
S + D + ++ + L+Y+H SA +IH DLKPSNV ++++ + DF +A+
Sbjct: 124 KSQALSDEHVQF-LVYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLAR 179
Query: 574 LLTGEDQSMTQTQTLGTIGYMAP 596
D+ M T + T Y AP
Sbjct: 180 ---QADEEM--TGYVATRWYRAP 197
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 78/176 (44%), Gaps = 29/176 (16%)
Query: 445 DEFSENNLIGRGGFALFIRA-------------------FKSFDV-----ECEMMKSIRH 480
++F NL+G+G FA RA +K+ V E ++ ++H
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70
Query: 481 RNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 540
+++++ + + + LVLE +G + +YL + + + M + + + YLH
Sbjct: 71 PSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH- 129
Query: 541 GYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
S ++H DL SN+LL NM ++DF +A L + GT Y++P
Sbjct: 130 --SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEK--HYTLCGTPNYISP 181
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 585
+ + + AL YL + VIH D+KPSN+LLD+ L DF I+ L + +
Sbjct: 128 KMTVAIVKALYYLKEKHG--VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK---AKD 182
Query: 586 QTLGTIGYMAP 596
++ G YMAP
Sbjct: 183 RSAGCAAYMAP 193
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +++++ L+K+ S + +V+EY+ G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLA-----GT 201
Query: 591 IGYMAP 596
Y+AP
Sbjct: 202 PEYLAP 207
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 585
I+ ++ L+YLH S IH D+K +NVLL + L+DF +A LT D + +
Sbjct: 120 TILREILKGLDYLH---SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLT--DTQIKRN 174
Query: 586 QTLGTIGYMAP 596
+GT +MAP
Sbjct: 175 XFVGTPFWMAP 185
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +++++ L+K+ S + +V+EY+ G + +L + R
Sbjct: 112 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQ 170
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + GT
Sbjct: 171 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 222
Query: 591 IGYMAP 596
Y+AP
Sbjct: 223 PEYLAP 228
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +++++ L+K+ S + +V+EY+ G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQ 149
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 591 IGYMAP 596
Y+AP
Sbjct: 202 PEYLAP 207
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +++++ L+K+ S + +V+EY+ G + +L + R
Sbjct: 86 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQ 144
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + GT
Sbjct: 145 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 196
Query: 591 IGYMAP 596
Y+AP
Sbjct: 197 PEYLAP 202
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 58/126 (46%), Gaps = 9/126 (7%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +++++ L+K+ S + +V+EY+ G + +L + R
Sbjct: 78 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQ 136
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ EYLH S +I+ DLKP N+L+D+ ++DF AK + G + GT
Sbjct: 137 IVLTFEYLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLC-----GT 188
Query: 591 IGYMAP 596
Y+AP
Sbjct: 189 PEYLAP 194
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +++++ L+K+ S + +V+EY+ G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQ 149
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 591 IGYMAP 596
Y+AP
Sbjct: 202 PEYLAP 207
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 22/139 (15%)
Query: 467 SFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL-----EKYLYSS-NCILD 520
S + E ++ I+H N++ + + L+++ + G L EK Y+ +
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL 121
Query: 521 IFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVL---LDDNMVAHLSDFSIAKLLTG 577
IFQ L+ A++YLH ++H DLKP N+L LD++ +SDF ++K+
Sbjct: 122 IFQVLD-------AVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--- 168
Query: 578 EDQSMTQTQTLGTIGYMAP 596
ED + GT GY+AP
Sbjct: 169 EDPGSVLSTACGTPGYVAP 187
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 63/126 (50%), Gaps = 5/126 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++K + H N++K++ E LV E++ H L+ ++ ++ + I L I
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKDFM-DASALTGIPLPL-IKSY 108
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ L+ L F +S V+H DLKP N+L++ L+DF +A+ + T + T
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVT 166
Query: 591 IGYMAP 596
+ Y AP
Sbjct: 167 LWYRAP 172
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 474 MMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVAS 533
++K ++H+N++++ +++ LV E+ L+KY S N LD + + +
Sbjct: 54 LLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLK 112
Query: 534 ALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAK 573
L + H S V+H DLKP N+L++ N L++F +A+
Sbjct: 113 GLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLAR 149
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 11/127 (8%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +++++ L+K+ S + +V+EY+ G + +L + R
Sbjct: 112 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQ 170
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTL-G 589
+ EYLH S +I+ DLKP N+L+D ++DF AK + G T TL G
Sbjct: 171 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------ATWTLCG 221
Query: 590 TIGYMAP 596
T Y+AP
Sbjct: 222 TPEYLAP 228
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +++++ L+K+ S + +V+EY+ G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARF-YAAQ 149
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 591 IGYMAP 596
Y+AP
Sbjct: 202 PEYLAP 207
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 9/99 (9%)
Query: 498 LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVL 557
+V+EY P G + +L + R + EYLH S +I+ DLKP N++
Sbjct: 119 MVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLM 174
Query: 558 LDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
+D ++DF AK + G + GT Y+AP
Sbjct: 175 IDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAP 208
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +++++ L+K+ S + +V+EY+ G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQ 149
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 591 IGYMAP 596
Y+AP
Sbjct: 202 PEYLAP 207
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 9/99 (9%)
Query: 498 LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVL 557
+V+EY P G + +L + R + EYLH S +I+ DLKP N++
Sbjct: 119 MVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLM 174
Query: 558 LDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
+D ++DF AK + G + GT Y+AP
Sbjct: 175 IDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAP 208
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 62/129 (48%), Gaps = 10/129 (7%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQR---LNI 527
E ++ +++H N+++ S +V++Y G L K + + +L FQ L+
Sbjct: 73 EVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVL--FQEDQILDW 130
Query: 528 MIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQT 587
+ + AL+++H ++H D+K N+ L + L DF IA++L +
Sbjct: 131 FVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVE--LARAC 185
Query: 588 LGTIGYMAP 596
+GT Y++P
Sbjct: 186 IGTPYYLSP 194
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 6/127 (4%)
Query: 470 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 529
E ++++ RH L + + + V+EY G L +L + R
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGA 112
Query: 530 DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLG 589
++ SALEYLH S V++ D+K N++LD + ++DF + K G T G
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCG 167
Query: 590 TIGYMAP 596
T Y+AP
Sbjct: 168 TPEYLAP 174
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 7/128 (5%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++M + + ++++I C E LV+E G L K+L + + ++
Sbjct: 60 EAQIMHQLDNPYIVRLIGVCQAEAL-MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQ 118
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
V+ ++YL +H DL NVLL + A +SDF ++K L G D S ++ G
Sbjct: 119 VSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKAL-GADDSYYTARSAGK 174
Query: 591 --IGYMAP 596
+ + AP
Sbjct: 175 WPLKWYAP 182
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +++++ L+K+ S + +V+EY+ G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLX-----GT 201
Query: 591 IGYMAP 596
Y+AP
Sbjct: 202 PEYLAP 207
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 77/161 (47%), Gaps = 34/161 (21%)
Query: 447 FSENNLIGRGGFALFIRAF----------------KSF-DVECEMMKSIRHRNLIKV--- 486
+++ +IG G F + +A K F + E ++M+ + H N++++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYF 81
Query: 487 -ISSCSNEE--FKALVLEYMP---HGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH- 539
SS ++ + LVL+Y+P + Y + + I+ +L M + +L Y+H
Sbjct: 82 FYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAYIHS 140
Query: 540 FGYSALVIHCDLKPSNVLLD-DNMVAHLSDFSIAK-LLTGE 578
FG + H D+KP N+LLD D V L DF AK L+ GE
Sbjct: 141 FG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 177
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 56/125 (44%), Gaps = 14/125 (11%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKA------LVLEYMPHGSLEKYLYSSNCIL 519
+ F E MK H ++ K++ K ++L +M HG L +L +S
Sbjct: 70 EEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGE 129
Query: 520 DIF-----QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKL 574
+ F + M+D+A +EYL S IH DL N +L ++M ++DF +++
Sbjct: 130 NPFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRK 186
Query: 575 LTGED 579
+ D
Sbjct: 187 IYSGD 191
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 6/127 (4%)
Query: 470 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 529
E ++++ RH L + + + V+EY G L +L + R
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGA 112
Query: 530 DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLG 589
++ SALEYLH S V++ D+K N++LD + ++DF + K G T G
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCG 167
Query: 590 TIGYMAP 596
T Y+AP
Sbjct: 168 TPEYLAP 174
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 6/127 (4%)
Query: 470 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 529
E ++++ RH L + + + V+EY G L +L + R
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGA 112
Query: 530 DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLG 589
++ SALEYLH S V++ D+K N++LD + ++DF + K G T G
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCG 167
Query: 590 TIGYMAP 596
T Y+AP
Sbjct: 168 TPEYLAP 174
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 6/127 (4%)
Query: 470 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 529
E ++++ RH L + + + V+EY G L +L + R
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGA 112
Query: 530 DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLG 589
++ SALEYLH S V++ D+K N++LD + ++DF + K G T G
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCG 167
Query: 590 TIGYMAP 596
T Y+AP
Sbjct: 168 TPEYLAP 174
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 65/138 (47%), Gaps = 20/138 (14%)
Query: 467 SFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL-----EKYLYSSNCILDI 521
S + E ++ I+H N++ + + L+++ + G L EK Y+
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTER----- 116
Query: 522 FQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVL---LDDNMVAHLSDFSIAKLLTGE 578
++ V A++YLH ++H DLKP N+L LD++ +SDF ++K+ E
Sbjct: 117 -DASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---E 169
Query: 579 DQSMTQTQTLGTIGYMAP 596
D + GT GY+AP
Sbjct: 170 DPGSVLSTACGTPGYVAP 187
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 6/127 (4%)
Query: 470 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 529
E ++++ RH L + + + V+EY G L +L + R
Sbjct: 57 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGA 115
Query: 530 DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLG 589
++ SALEYLH S V++ D+K N++LD + ++DF + K G T G
Sbjct: 116 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCG 170
Query: 590 TIGYMAP 596
T Y+AP
Sbjct: 171 TPEYLAP 177
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 6/127 (4%)
Query: 470 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 529
E ++++ RH L + + + V+EY G L +L + R
Sbjct: 59 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGA 117
Query: 530 DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLG 589
++ SALEYLH S V++ D+K N++LD + ++DF + K G T G
Sbjct: 118 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCG 172
Query: 590 TIGYMAP 596
T Y+AP
Sbjct: 173 TPEYLAP 179
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +++++ L+K+ S + +V+EY+ G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 591 IGYMAP 596
Y+AP
Sbjct: 202 PEYLAP 207
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +++++ L+K+ S + +V+EY+ G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 591 IGYMAP 596
Y+AP
Sbjct: 202 PEYLAP 207
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 74/181 (40%), Gaps = 32/181 (17%)
Query: 442 RATDEFSENNLIGRGGFALFIRAFK-----------------------SFDVECEMMKSI 478
R T+E+ +G+G F++ R K + E + + +
Sbjct: 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLL 67
Query: 479 RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 538
+H N++++ S S E L+ + + G L+ + + + + LE +
Sbjct: 68 KHPNIVRLHDSISEEGHHYLIFDLVTGGE----LFEDIVAREYYSEADASHCIQQILEAV 123
Query: 539 HFGYSALVIHCDLKPSNVLLDDNM---VAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMA 595
+ V+H +LKP N+LL + L+DF +A + GE Q+ GT GY++
Sbjct: 124 LHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFA--GTPGYLS 181
Query: 596 P 596
P
Sbjct: 182 P 182
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 22/139 (15%)
Query: 467 SFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL-----EKYLYSS-NCILD 520
S + E ++ I+H N++ + + L+++ + G L EK Y+ +
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL 121
Query: 521 IFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVL---LDDNMVAHLSDFSIAKLLTG 577
IFQ L+ A++YLH ++H DLKP N+L LD++ +SDF ++K+
Sbjct: 122 IFQVLD-------AVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--- 168
Query: 578 EDQSMTQTQTLGTIGYMAP 596
ED + GT GY+AP
Sbjct: 169 EDPGSVLSTACGTPGYVAP 187
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +++++ L+K+ S + +V+EY+ G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 591 IGYMAP 596
Y+AP
Sbjct: 202 PEYLAP 207
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +++++ L+K+ S + +V+EY+ G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 591 IGYMAP 596
Y+AP
Sbjct: 202 PEYLAP 207
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 6/127 (4%)
Query: 470 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 529
E ++++ RH L + + + V+EY G L +L + R
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGA 112
Query: 530 DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLG 589
++ SALEYLH S V++ D+K N++LD + ++DF + K G T G
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCG 167
Query: 590 TIGYMAP 596
T Y+AP
Sbjct: 168 TPEYLAP 174
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +++++ L+K+ S + +V+EY+ G + +L + R
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQ 150
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + GT
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 202
Query: 591 IGYMAP 596
Y+AP
Sbjct: 203 PEYLAP 208
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +++++ L+K+ S + +V+EY+ G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 591 IGYMAP 596
Y+AP
Sbjct: 202 PEYLAP 207
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +++++ L+K+ S + +V+EY+ G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 591 IGYMAP 596
Y+AP
Sbjct: 202 PEYLAP 207
>pdb|3G3A|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|C Chain C, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|E Chain E, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|G Chain G, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
Length = 178
Score = 42.7 bits (99), Expect = 6e-04, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 64 LYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTSST 123
LYL+ N + P ++L++L L N + F L L QL L++N L S
Sbjct: 43 LYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQL-KSI 101
Query: 124 PELSFLSSLSNCKSLTLIDLSNNPLD 149
P +F N KSLT I L NNP D
Sbjct: 102 PRGAF----DNLKSLTHIWLLNNPWD 123
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 36/102 (35%), Positives = 47/102 (46%), Gaps = 4/102 (3%)
Query: 191 IDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKLYGSI 250
+D G L S+P G Q L L DN + P RL +L RL+L +N+L
Sbjct: 22 VDCSGKSL-ASVPT--GIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLP 78
Query: 251 PACFGNLASLRILSLGSNKLTSIPL-TFWNLKDILQLNFSSN 291
F L L LSL N+L SIP F NLK + + +N
Sbjct: 79 AGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNN 120
Score = 33.5 bits (75), Expect = 0.31, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 133 SNCK-SLTLIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCNISGGIPEEISNLTNLVEI 191
S C S T +D S L + T I ++ L Y+Y+ I+ P LT L +
Sbjct: 13 SQCSCSGTTVDCSGKSLASV--PTGIPTTTQVL---YLYDNQITKLEPGVFDRLTQLTRL 67
Query: 192 DLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIP 227
DL N+L KL +L +L+L DN L+ SIP
Sbjct: 68 DLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLK-SIP 102
Score = 29.3 bits (64), Expect = 6.3, Method: Composition-based stats.
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 30/116 (25%)
Query: 243 SNKLYGSIPACFGNLASLRILSLGSNKLTSI-PLTFWNLKDILQLNFSSNFLTGPLLLEI 301
S K S+P G + ++L L N++T + P F L + +L+ +N LT
Sbjct: 25 SGKSLASVPT--GIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLT------- 75
Query: 302 GNLKVLIGIDFSMNNFSGVIPREIGEKLSYLEDLNLSFNKLKGEIPRGGSFGNFSA 357
V+P + +KL+ L L+L+ N+LK IPR G+F N +
Sbjct: 76 ------------------VLPAGVFDKLTQLTQLSLNDNQLK-SIPR-GAFDNLKS 111
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 56/136 (41%), Gaps = 9/136 (6%)
Query: 464 AFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL--YSSNCILDI 521
A F E M S+ HRNLI++ K +V E P GSL L + + +L
Sbjct: 64 AMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGT 122
Query: 522 FQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLL-TGEDQ 580
R + VA + YL S IH DL N+LL + + DF + + L +D
Sbjct: 123 LSRYAVQ--VAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 177
Query: 581 SMTQTQTLGTIGYMAP 596
+ Q + AP
Sbjct: 178 XVMQEHRKVPFAWCAP 193
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 8/89 (8%)
Query: 510 KYLYSSNCILD--IFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLS 567
KY+YS +LD I + + I +A+ H + +IH D+KPSN+LLD + L
Sbjct: 112 KYVYS---VLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLC 168
Query: 568 DFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
DF I+ L S+ +T+ G YMAP
Sbjct: 169 DFGISGQLV---DSIAKTRDAGCRPYMAP 194
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +++++ L+K+ S + +V+EY+ G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 591 IGYMAP 596
Y+AP
Sbjct: 202 PEYLAP 207
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 59/133 (44%), Gaps = 4/133 (3%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 522
+A K E +M S+ + ++ +++ C + L+ + MP G L Y+ +
Sbjct: 59 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQ 117
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582
LN + +A + YL ++H DL NVL+ ++DF +AKLL E++
Sbjct: 118 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 174
Query: 583 TQTQTLGTIGYMA 595
I +MA
Sbjct: 175 HAEGGKVPIKWMA 187
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 59/133 (44%), Gaps = 4/133 (3%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 522
+A K E +M S+ + ++ +++ C + L+ + MP G L Y+ +
Sbjct: 61 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ 119
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582
LN + +A + YL ++H DL NVL+ ++DF +AKLL E++
Sbjct: 120 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 176
Query: 583 TQTQTLGTIGYMA 595
I +MA
Sbjct: 177 HAEGGKVPIKWMA 189
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 59/133 (44%), Gaps = 4/133 (3%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 522
+A K E +M S+ + ++ +++ C + L+ + MP G L Y+ +
Sbjct: 66 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ 124
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582
LN + +A + YL ++H DL NVL+ ++DF +AKLL E++
Sbjct: 125 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 181
Query: 583 TQTQTLGTIGYMA 595
I +MA
Sbjct: 182 HAEGGKVPIKWMA 194
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 17/148 (11%)
Query: 463 RAFKSFDVECEMMKSI--RHRNLIKVISSCSNEEFKA----LVLEYMPHGSLEKYLYSSN 516
R +S+ E E+ +++ RH N++ I++ + + LV +Y HGSL YL
Sbjct: 76 REERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT 135
Query: 517 CILDIFQRLNIMIDVASALEYLHF------GYSALVIHCDLKPSNVLLDDNMVAHLSDFS 570
++ + + + AS L +LH G A+ H DLK N+L+ N ++D
Sbjct: 136 VTVEGM--IKLALSTASGLAHLHMEIVGTQGKPAIA-HRDLKSKNILVKKNGTCCIADLG 192
Query: 571 IA-KLLTGEDQ-SMTQTQTLGTIGYMAP 596
+A + + D + +GT YMAP
Sbjct: 193 LAVRHDSATDTIDIAPNHRVGTKRYMAP 220
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 59/133 (44%), Gaps = 4/133 (3%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 522
+A K E +M S+ + ++ +++ C + L+ + MP G L Y+ +
Sbjct: 62 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ 120
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582
LN + +A + YL ++H DL NVL+ ++DF +AKLL E++
Sbjct: 121 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 177
Query: 583 TQTQTLGTIGYMA 595
I +MA
Sbjct: 178 HAEGGKVPIKWMA 190
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 65/138 (47%), Gaps = 20/138 (14%)
Query: 467 SFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL-----EKYLYSSNCILDI 521
S + E ++ I+H N++ + + L+++ + G L EK Y+
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTER----- 116
Query: 522 FQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVL---LDDNMVAHLSDFSIAKLLTGE 578
++ V A++YLH ++H DLKP N+L LD++ +SDF ++K+ E
Sbjct: 117 -DASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---E 169
Query: 579 DQSMTQTQTLGTIGYMAP 596
D + GT GY+AP
Sbjct: 170 DPGSVLSTACGTPGYVAP 187
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 59/133 (44%), Gaps = 4/133 (3%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 522
+A K E +M S+ + ++ +++ C + L+ + MP G L Y+ +
Sbjct: 84 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ 142
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582
LN + +A + YL ++H DL NVL+ ++DF +AKLL E++
Sbjct: 143 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 199
Query: 583 TQTQTLGTIGYMA 595
I +MA
Sbjct: 200 HAEGGKVPIKWMA 212
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 59/133 (44%), Gaps = 4/133 (3%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 522
+A K E +M S+ + ++ +++ C + L+ + MP G L Y+ +
Sbjct: 62 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ 120
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582
LN + +A + YL ++H DL NVL+ ++DF +AKLL E++
Sbjct: 121 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 177
Query: 583 TQTQTLGTIGYMA 595
I +MA
Sbjct: 178 HAEGGKVPIKWMA 190
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 59/133 (44%), Gaps = 4/133 (3%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 522
+A K E +M S+ + ++ +++ C + L+ + MP G L Y+ +
Sbjct: 62 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ 120
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582
LN + +A + YL ++H DL NVL+ ++DF +AKLL E++
Sbjct: 121 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 177
Query: 583 TQTQTLGTIGYMA 595
I +MA
Sbjct: 178 HAEGGKVPIKWMA 190
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 66/131 (50%), Gaps = 10/131 (7%)
Query: 471 ECEMMKSIRHRNLI---KVISSCSNEEFKAL-VLEYMPHGSLEKYLYSSNCILDIFQRLN 526
E +++ RH N+I +I + + E+ K + +++ + L K L + + D
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICY 128
Query: 527 IMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE-DQSMTQT 585
+ + L+Y+H SA V+H DLKPSN+LL+ + DF +A++ + D + T
Sbjct: 129 FLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLT 185
Query: 586 QTLGTIGYMAP 596
+ + T Y AP
Sbjct: 186 EYVATRWYRAP 196
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 59/133 (44%), Gaps = 4/133 (3%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 522
+A K E +M S+ + ++ +++ C + L+ + MP G L Y+ +
Sbjct: 59 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ 117
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582
LN + +A + YL ++H DL NVL+ ++DF +AKLL E++
Sbjct: 118 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 174
Query: 583 TQTQTLGTIGYMA 595
I +MA
Sbjct: 175 HAEGGKVPIKWMA 187
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +++++ L+K+ S + +V+EY+ G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ EYLH S +I+ DLKP N+L+D ++DF AK + G + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 591 IGYMAP 596
Y+AP
Sbjct: 202 PEYLAP 207
>pdb|3ZYN|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
pdb|3ZYN|B Chain B, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
Length = 321
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 94/208 (45%), Gaps = 11/208 (5%)
Query: 88 LSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNP 147
L+L NS TF +LR+LE L L +N + + + + SL ++L +N
Sbjct: 40 LNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIE-----VGAFNGLPSLNTLELFDNR 94
Query: 148 LDGILPKTSISNLSRSLEEFYMYNCNISGGIPEEISNLTNLVEIDLGG-NKLNGSIPITL 206
L + P + LS+ L E ++ N I + + +L +DLG +L
Sbjct: 95 LTTV-PTQAFEYLSK-LRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAF 152
Query: 207 GKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKLYGSIPACFGNLASLRILSLG 266
L L+ LNL L+ IP+ + L L LEL N+L P F L SLR L L
Sbjct: 153 EGLVNLRYLNLGMCNLK-DIPN-LTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLM 210
Query: 267 SNKLTSIPL-TFWNLKDILQLNFSSNFL 293
++ +I F +LK + +LN S N L
Sbjct: 211 HAQVATIERNAFDDLKSLEELNLSHNNL 238
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 75/162 (46%), Gaps = 9/162 (5%)
Query: 185 LTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPD-DICRLAELYRLELGS 243
L +L ++L N+L L KL+ L L +N +E SIP R+ L RL+LG
Sbjct: 82 LPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIE-SIPSYAFNRVPSLRRLDLGE 140
Query: 244 NKLYGSI-PACFGNLASLRILSLGSNKLTSIPLTFWNLKDILQLNFSSNFLTGPLLLEIG 302
K I A F L +LR L+LG L IP L + +L S N L L+ G
Sbjct: 141 LKRLEYISEAAFEGLVNLRYLNLGMCNLKDIP-NLTALVRLEELELSGNRLD---LIRPG 196
Query: 303 NLKVLIGID--FSMNNFSGVIPREIGEKLSYLEDLNLSFNKL 342
+ + L + + M+ I R + L LE+LNLS N L
Sbjct: 197 SFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNL 238
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 79/183 (43%), Gaps = 24/183 (13%)
Query: 58 LPNLEKLYLWGNNFSGTIPRFIFNA-SKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDE 116
LP+L L L+ N + T+P F SKL +L L N F + +L +L L E
Sbjct: 82 LPSLNTLELFDNRLT-TVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGE 140
Query: 117 ------------------NYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSIS 158
YL L + +L+ L ++LS N LD I P S
Sbjct: 141 LKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPNLTALVRLEELELSGNRLDLIRPG-SFQ 199
Query: 159 NLSRSLEEFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITL-GKLRKLQRLNL 217
L+ SL + ++ + ++ +L +L E++L N L S+P L L +L+R++L
Sbjct: 200 GLT-SLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNL-MSLPHDLFTPLHRLERVHL 257
Query: 218 EDN 220
N
Sbjct: 258 NHN 260
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 85/211 (40%), Gaps = 42/211 (19%)
Query: 172 CNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDIC 231
C+ S I L E+ SIP+ + LNL++N ++ D
Sbjct: 10 CSCSNQASRVICTRRELAEVP-------ASIPVNT------RYLNLQENSIQVIRTDTFK 56
Query: 232 RLAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSIPL-TFWNLKDILQLNFSS 290
L L L+L N + F L SL L L N+LT++P F L + +L +
Sbjct: 57 HLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRN 116
Query: 291 N---------FLTGPLL--LEIGNLKVLIGIDFSMNNFSGVIP-----------REIGE- 327
N F P L L++G LK L I S F G++ ++I
Sbjct: 117 NPIESIPSYAFNRVPSLRRLDLGELKRLEYI--SEAAFEGLVNLRYLNLGMCNLKDIPNL 174
Query: 328 -KLSYLEDLNLSFNKLKGEIPRGGSFGNFSA 357
L LE+L LS N+L ++ R GSF ++
Sbjct: 175 TALVRLEELELSGNRL--DLIRPGSFQGLTS 203
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 59/133 (44%), Gaps = 4/133 (3%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 522
+A K E +M S+ + ++ +++ C + L+ + MP G L Y+ +
Sbjct: 66 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ 124
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582
LN + +A + YL ++H DL NVL+ ++DF +AKLL E++
Sbjct: 125 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 181
Query: 583 TQTQTLGTIGYMA 595
I +MA
Sbjct: 182 HAEGGKVPIKWMA 194
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 59/133 (44%), Gaps = 4/133 (3%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 522
+A K E +M S+ + ++ +++ C + L+ + MP G L Y+ +
Sbjct: 59 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ 117
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582
LN + +A + YL ++H DL NVL+ ++DF +AKLL E++
Sbjct: 118 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 174
Query: 583 TQTQTLGTIGYMA 595
I +MA
Sbjct: 175 HAEGGKVPIKWMA 187
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 13/82 (15%)
Query: 525 LNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM-- 582
L+I I +A A+E+LH S ++H DLKPSN+ + V + DF + + +++
Sbjct: 167 LHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 583 --------TQTQTLGTIGYMAP 596
T +GT YM+P
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSP 245
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 65/131 (49%), Gaps = 10/131 (7%)
Query: 471 ECEMMKSIRHRNLI---KVISSCSNEEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLN 526
E +++ RH N+I +I + + E+ K + L ++ L K L + + D
Sbjct: 91 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSND--HICY 148
Query: 527 IMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE-DQSMTQT 585
+ + L+Y+H SA V+H DLKPSN+LL+ + DF +A++ + D + T
Sbjct: 149 FLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 205
Query: 586 QTLGTIGYMAP 596
+ + T Y AP
Sbjct: 206 EYVATRWYRAP 216
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 56/136 (41%), Gaps = 9/136 (6%)
Query: 464 AFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL--YSSNCILDI 521
A F E M S+ HRNLI++ K +V E P GSL L + + +L
Sbjct: 54 AMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGT 112
Query: 522 FQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLL-TGEDQ 580
R + VA + YL S IH DL N+LL + + DF + + L +D
Sbjct: 113 LSR--YAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 167
Query: 581 SMTQTQTLGTIGYMAP 596
+ Q + AP
Sbjct: 168 XVMQEHRKVPFAWCAP 183
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 67/131 (51%), Gaps = 10/131 (7%)
Query: 471 ECEMMKSIRHRNLI---KVISSCSNEEFKAL-VLEYMPHGSLEKYLYSSNCILDIFQRLN 526
E +++ + RH N+I +I + + E+ K + +++ + L K L + + D
Sbjct: 73 EIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICY 130
Query: 527 IMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE-DQSMTQT 585
+ + L+Y+H SA V+H DLKPSN+LL+ + DF +A++ + D + T
Sbjct: 131 FLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 187
Query: 586 QTLGTIGYMAP 596
+ + T Y AP
Sbjct: 188 EYVATRWYRAP 198
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 59/133 (44%), Gaps = 4/133 (3%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 522
+A K E +M S+ + ++ +++ C + L+ + MP G L Y+ +
Sbjct: 65 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ 123
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582
LN + +A + YL ++H DL NVL+ ++DF +AKLL E++
Sbjct: 124 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 180
Query: 583 TQTQTLGTIGYMA 595
I +MA
Sbjct: 181 HAEGGKVPIKWMA 193
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 25/152 (16%)
Query: 463 RAFKSFDVECEMMKSI--RHRNLIKVISSCSNEEFKA----LVLEYMPHGSLEKYLYSSN 516
R +S+ E E+ +++ RH N++ I++ + + LV +Y HGSL YL
Sbjct: 63 REERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT 122
Query: 517 CILDIFQRLNIMIDVASALEYLHF------GYSALVIHCDLKPSNVLLDDNMVAHLSDFS 570
++ + + + AS L +LH G A+ H DLK N+L+ N ++D
Sbjct: 123 VTVEGM--IKLALSTASGLAHLHMEIVGTQGKPAIA-HRDLKSKNILVKKNGTCCIADLG 179
Query: 571 IAKLLTGEDQSMTQT------QTLGTIGYMAP 596
+A S T T +GT YMAP
Sbjct: 180 LAV----RHDSATDTIDIAPNHRVGTKRYMAP 207
>pdb|3G39|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor
Length = 170
Score = 42.4 bits (98), Expect = 8e-04, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 64 LYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTSST 123
LYL+ N + P ++L++L L N + F L L QL L++N L S
Sbjct: 35 LYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQL-KSI 93
Query: 124 PELSFLSSLSNCKSLTLIDLSNNPLD 149
P +F N KSLT I L NNP D
Sbjct: 94 PRGAF----DNLKSLTHIWLLNNPWD 115
Score = 39.3 bits (90), Expect = 0.006, Method: Composition-based stats.
Identities = 36/102 (35%), Positives = 47/102 (46%), Gaps = 4/102 (3%)
Query: 191 IDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKLYGSI 250
+D G L S+P G Q L L DN + P RL +L RL+L +N+L
Sbjct: 14 VDCSGKSL-ASVPT--GIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLP 70
Query: 251 PACFGNLASLRILSLGSNKLTSIPL-TFWNLKDILQLNFSSN 291
F L L LSL N+L SIP F NLK + + +N
Sbjct: 71 AGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNN 112
Score = 33.5 bits (75), Expect = 0.39, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 133 SNCK-SLTLIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCNISGGIPEEISNLTNLVEI 191
S C S T +D S L + T I ++ L Y+Y+ I+ P LT L +
Sbjct: 5 SQCSCSGTTVDCSGKSLASV--PTGIPTTTQVL---YLYDNQITKLEPGVFDRLTQLTRL 59
Query: 192 DLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIP 227
DL N+L KL +L +L+L DN L+ SIP
Sbjct: 60 DLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLK-SIP 94
Score = 28.9 bits (63), Expect = 8.6, Method: Composition-based stats.
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 30/116 (25%)
Query: 243 SNKLYGSIPACFGNLASLRILSLGSNKLTSI-PLTFWNLKDILQLNFSSNFLTGPLLLEI 301
S K S+P G + ++L L N++T + P F L + +L+ +N LT
Sbjct: 17 SGKSLASVPT--GIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLT------- 67
Query: 302 GNLKVLIGIDFSMNNFSGVIPREIGEKLSYLEDLNLSFNKLKGEIPRGGSFGNFSA 357
V+P + +KL+ L L+L+ N+LK IPR G+F N +
Sbjct: 68 ------------------VLPAGVFDKLTQLTQLSLNDNQLK-SIPR-GAFDNLKS 103
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 59/133 (44%), Gaps = 4/133 (3%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 522
+A K E +M S+ + ++ +++ C + L+++ MP G L Y+ +
Sbjct: 61 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQ 119
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582
LN + +A + YL ++H DL NVL+ ++DF AKLL E++
Sbjct: 120 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEY 176
Query: 583 TQTQTLGTIGYMA 595
I +MA
Sbjct: 177 HAEGGKVPIKWMA 189
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 65/146 (44%), Gaps = 18/146 (12%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQR- 524
+ F E + ++H N++ ++ + ++ +++ Y HG L ++L + D+
Sbjct: 57 EEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTD 116
Query: 525 --------------LNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFS 570
++++ +A+ +EYL S V+H DL NVL+ D + +SD
Sbjct: 117 DDRTVKSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKLNVKISDLG 173
Query: 571 IAKLLTGEDQSMTQTQTLGTIGYMAP 596
+ + + D +L I +MAP
Sbjct: 174 LFREVYAADYYKLLGNSLLPIRWMAP 199
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 59/133 (44%), Gaps = 4/133 (3%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 522
+A K E +M S+ + ++ +++ C + L+ + MP G L Y+ +
Sbjct: 59 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ 117
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582
LN + +A + YL ++H DL NVL+ ++DF +AKLL E++
Sbjct: 118 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 174
Query: 583 TQTQTLGTIGYMA 595
I +MA
Sbjct: 175 HAEGGKVPIKWMA 187
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 67/131 (51%), Gaps = 10/131 (7%)
Query: 471 ECEMMKSIRHRNLI---KVISSCSNEEFKAL-VLEYMPHGSLEKYLYSSNCILDIFQRLN 526
E +++ + RH N+I +I + + E+ K + +++ + L K L + + D
Sbjct: 73 EIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICY 130
Query: 527 IMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE-DQSMTQT 585
+ + L+Y+H SA V+H DLKPSN+LL+ + DF +A++ + D + T
Sbjct: 131 FLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLT 187
Query: 586 QTLGTIGYMAP 596
+ + T Y AP
Sbjct: 188 EYVATRWYRAP 198
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 59/133 (44%), Gaps = 4/133 (3%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 522
+A K E +M S+ + ++ +++ C + L+ + MP G L Y+ +
Sbjct: 69 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ 127
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582
LN + +A + YL ++H DL NVL+ ++DF +AKLL E++
Sbjct: 128 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 184
Query: 583 TQTQTLGTIGYMA 595
I +MA
Sbjct: 185 HAEGGKVPIKWMA 197
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 59/133 (44%), Gaps = 4/133 (3%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 522
+A K E +M S+ + ++ +++ C + L+++ MP G L Y+ +
Sbjct: 61 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQ 119
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582
LN + +A + YL ++H DL NVL+ ++DF AKLL E++
Sbjct: 120 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEY 176
Query: 583 TQTQTLGTIGYMA 595
I +MA
Sbjct: 177 HAEGGKVPIKWMA 189
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 66/131 (50%), Gaps = 10/131 (7%)
Query: 471 ECEMMKSIRHRNLI---KVISSCSNEEFKAL-VLEYMPHGSLEKYLYSSNCILDIFQRLN 526
E +++ RH N+I +I + + E+ K + +++ + L K L + + D
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICY 128
Query: 527 IMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE-DQSMTQT 585
+ + L+Y+H SA V+H DLKPSN+LL+ + DF +A++ + D + T
Sbjct: 129 FLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 185
Query: 586 QTLGTIGYMAP 596
+ + T Y AP
Sbjct: 186 EYVATRWYRAP 196
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 25/152 (16%)
Query: 463 RAFKSFDVECEMMKSI--RHRNLIKVISSCSNEEFKA----LVLEYMPHGSLEKYLYSSN 516
R +S+ E E+ +++ RH N++ I++ + + LV +Y HGSL YL
Sbjct: 43 REERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT 102
Query: 517 CILDIFQRLNIMIDVASALEYLHF------GYSALVIHCDLKPSNVLLDDNMVAHLSDFS 570
++ + + + AS L +LH G A+ H DLK N+L+ N ++D
Sbjct: 103 VTVEGM--IKLALSTASGLAHLHMEIVGTQGKPAIA-HRDLKSKNILVKKNGTCCIADLG 159
Query: 571 IAKLLTGEDQSMTQT------QTLGTIGYMAP 596
+A S T T +GT YMAP
Sbjct: 160 LAV----RHDSATDTIDIAPNHRVGTKRYMAP 187
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 17/148 (11%)
Query: 463 RAFKSFDVECEMMKSI--RHRNLIKVISSCSNEEFKA----LVLEYMPHGSLEKYLYSSN 516
R +S+ E E+ +++ RH N++ I++ + + LV +Y HGSL YL
Sbjct: 40 REERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT 99
Query: 517 CILDIFQRLNIMIDVASALEYLHF------GYSALVIHCDLKPSNVLLDDNMVAHLSDFS 570
++ + + + AS L +LH G A+ H DLK N+L+ N ++D
Sbjct: 100 VTVEGM--IKLALSTASGLAHLHMEIVGTQGKPAIA-HRDLKSKNILVKKNGTCCIADLG 156
Query: 571 IA-KLLTGEDQ-SMTQTQTLGTIGYMAP 596
+A + + D + +GT YMAP
Sbjct: 157 LAVRHDSATDTIDIAPNHRVGTKRYMAP 184
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 66/131 (50%), Gaps = 10/131 (7%)
Query: 471 ECEMMKSIRHRNLI---KVISSCSNEEFKAL-VLEYMPHGSLEKYLYSSNCILDIFQRLN 526
E +++ RH N+I +I + + E+ K + +++ + L K L + + D
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICY 132
Query: 527 IMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE-DQSMTQT 585
+ + L+Y+H SA V+H DLKPSN+LL+ + DF +A++ + D + T
Sbjct: 133 FLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 189
Query: 586 QTLGTIGYMAP 596
+ + T Y AP
Sbjct: 190 EYVATRWYRAP 200
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 62/125 (49%), Gaps = 5/125 (4%)
Query: 462 IRAFKSFDVECEMMKSIRHRNLIKVIS-SCSNEEFKALVLEYMPHGSLEKYLYSSNCILD 520
++ ++F E +M+ + H N++ +I E ++L YM HG L +++ S
Sbjct: 63 MQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPT 122
Query: 521 IFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAK-LLTGED 579
+ ++ + VA +EYL +H DL N +LD++ ++DF +A+ +L E
Sbjct: 123 VKDLISFGLQVARGMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREY 179
Query: 580 QSMTQ 584
S+ Q
Sbjct: 180 YSVQQ 184
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 59/133 (44%), Gaps = 4/133 (3%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 522
+A K E +M S+ + ++ +++ C + L+ + MP G L Y+ +
Sbjct: 93 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ 151
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582
LN + +A + YL ++H DL NVL+ ++DF +AKLL E++
Sbjct: 152 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 208
Query: 583 TQTQTLGTIGYMA 595
I +MA
Sbjct: 209 HAEGGKVPIKWMA 221
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 56/136 (41%), Gaps = 9/136 (6%)
Query: 464 AFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL--YSSNCILDI 521
A F E M S+ HRNLI++ K +V E P GSL L + + +L
Sbjct: 64 AMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGT 122
Query: 522 FQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLL-TGEDQ 580
R + VA + YL S IH DL N+LL + + DF + + L +D
Sbjct: 123 LSRYAVQ--VAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 177
Query: 581 SMTQTQTLGTIGYMAP 596
+ Q + AP
Sbjct: 178 YVMQEHRKVPFAWCAP 193
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 81/199 (40%), Gaps = 58/199 (29%)
Query: 440 LCRATDEFSENNLIGRGGFALFIRAFKSFDVE---------------------------- 471
LCRA ++ IG G + + FK+ D++
Sbjct: 6 LCRADQQYECVAEIGEGAYG---KVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREV 62
Query: 472 --CEMMKSIRHRNLIKVISSCS----NEEFK-ALVLEYMPHGSLEKYL-------YSSNC 517
+++ H N++++ C+ + E K LV E++ L YL +
Sbjct: 63 AVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTET 121
Query: 518 ILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTG 577
I D+ M + L++LH S V+H DLKP N+L+ + L+DF +A++ +
Sbjct: 122 IKDM------MFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF 172
Query: 578 EDQSMTQTQTLGTIGYMAP 596
+ M T + T+ Y AP
Sbjct: 173 Q---MALTSVVVTLWYRAP 188
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 84/185 (45%), Gaps = 33/185 (17%)
Query: 438 LELCRATDEFSENNLIGRGGFA-LFIRAFKSF------------------DVECEMMK-- 476
L++ ++F + ++G+G F +F+ FK DVEC M++
Sbjct: 11 LQIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKR 70
Query: 477 ----SIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVA 532
+ H L + + +E V+EY+ G L ++ S + D+ + ++
Sbjct: 71 VLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK-FDLSRATFYAAEII 129
Query: 533 SALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKL-LTGEDQSMTQTQTLGTI 591
L++LH S +++ DLK N+LLD + ++DF + K + G+ ++ + GT
Sbjct: 130 LGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT---NEFCGTP 183
Query: 592 GYMAP 596
Y+AP
Sbjct: 184 DYIAP 188
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 17/148 (11%)
Query: 463 RAFKSFDVECEMMKSI--RHRNLIKVISSCSNEEFKA----LVLEYMPHGSLEKYLYSSN 516
R +S+ E E+ +++ RH N++ I++ + + LV +Y HGSL YL
Sbjct: 38 REERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT 97
Query: 517 CILDIFQRLNIMIDVASALEYLHF------GYSALVIHCDLKPSNVLLDDNMVAHLSDFS 570
++ + + + AS L +LH G A+ H DLK N+L+ N ++D
Sbjct: 98 VTVEGM--IKLALSTASGLAHLHMEIVGTQGKPAIA-HRDLKSKNILVKKNGTCCIADLG 154
Query: 571 IA-KLLTGEDQ-SMTQTQTLGTIGYMAP 596
+A + + D + +GT YMAP
Sbjct: 155 LAVRHDSATDTIDIAPNHRVGTKRYMAP 182
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 56/136 (41%), Gaps = 9/136 (6%)
Query: 464 AFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL--YSSNCILDI 521
A F E M S+ HRNLI++ K +V E P GSL L + + +L
Sbjct: 58 AMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGT 116
Query: 522 FQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLL-TGEDQ 580
R + VA + YL S IH DL N+LL + + DF + + L +D
Sbjct: 117 LSRY--AVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 171
Query: 581 SMTQTQTLGTIGYMAP 596
+ Q + AP
Sbjct: 172 YVMQEHRKVPFAWCAP 187
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 66/131 (50%), Gaps = 10/131 (7%)
Query: 471 ECEMMKSIRHRNLI---KVISSCSNEEFKAL-VLEYMPHGSLEKYLYSSNCILDIFQRLN 526
E +++ RH N+I +I + + E+ K + +++ + L K L + + D
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICY 128
Query: 527 IMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE-DQSMTQT 585
+ + L+Y+H SA V+H DLKPSN+LL+ + DF +A++ + D + T
Sbjct: 129 FLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 185
Query: 586 QTLGTIGYMAP 596
+ + T Y AP
Sbjct: 186 EYVATRWYRAP 196
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 66/131 (50%), Gaps = 10/131 (7%)
Query: 471 ECEMMKSIRHRNLI---KVISSCSNEEFKAL-VLEYMPHGSLEKYLYSSNCILDIFQRLN 526
E +++ RH N+I +I + + E+ K + +++ + L K L + + D
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICY 132
Query: 527 IMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE-DQSMTQT 585
+ + L+Y+H SA V+H DLKPSN+LL+ + DF +A++ + D + T
Sbjct: 133 FLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 189
Query: 586 QTLGTIGYMAP 596
+ + T Y AP
Sbjct: 190 EYVATRWYRAP 200
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 73/165 (44%), Gaps = 23/165 (13%)
Query: 453 IGRG---GFALFIRAFKSFD-----VECEMMKSI--RHRNLIKVISSCSNEEFKA----L 498
+ RG G ++ ++ F S D E E+ ++ RH N++ I+S + L
Sbjct: 24 VWRGLWHGESVAVKIFSSRDEQSWFRETEIYNTVLLRHDNILGFIASDMTSRNSSTQLWL 83
Query: 499 VLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH---FGYSA--LVIHCDLKP 553
+ Y HGSL +L L+ L + + A L +LH FG + H D K
Sbjct: 84 ITHYHEHGSLYDFLQRQT--LEPHLALRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFKS 141
Query: 554 SNVLLDDNMVAHLSDFSIAKLLT-GEDQ-SMTQTQTLGTIGYMAP 596
NVL+ N+ ++D +A + + G D + +GT YMAP
Sbjct: 142 RNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAP 186
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 67/136 (49%), Gaps = 13/136 (9%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS---LEKYLYSS----NCILDIFQ 523
E + M H N++ +S ++ LV++ + GS + K++ + + +LD
Sbjct: 58 EIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDEST 117
Query: 524 RLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLL-TGEDQSM 582
I+ +V LEYLH IH D+K N+LL ++ ++DF ++ L TG D +
Sbjct: 118 IATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITR 174
Query: 583 TQTQT--LGTIGYMAP 596
+ + +GT +MAP
Sbjct: 175 NKVRKTFVGTPCWMAP 190
>pdb|3ZYO|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
And Immunoglobulin Domain Of Netrin-G Ligand-3
Length = 411
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 75/162 (46%), Gaps = 9/162 (5%)
Query: 185 LTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPD-DICRLAELYRLELGS 243
L +L ++L N+L L KL+ L L +N +E SIP R+ L RL+LG
Sbjct: 82 LPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIE-SIPSYAFNRVPSLRRLDLGE 140
Query: 244 NKLYGSI-PACFGNLASLRILSLGSNKLTSIPLTFWNLKDILQLNFSSNFLTGPLLLEIG 302
K I A F L +LR L+LG L IP L + +L S N L L+ G
Sbjct: 141 LKRLEYISEAAFEGLVNLRYLNLGMCNLKDIP-NLTALVRLEELELSGNRLD---LIRPG 196
Query: 303 NLKVLIGID--FSMNNFSGVIPREIGEKLSYLEDLNLSFNKL 342
+ + L + + M+ I R + L LE+LNLS N L
Sbjct: 197 SFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNL 238
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 94/208 (45%), Gaps = 11/208 (5%)
Query: 88 LSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNP 147
L+L NS TF +LR+LE L L +N + + + + SL ++L +N
Sbjct: 40 LNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIE-----VGAFNGLPSLNTLELFDNR 94
Query: 148 LDGILPKTSISNLSRSLEEFYMYNCNISGGIPEEISNLTNLVEIDLGG-NKLNGSIPITL 206
L + P + LS+ L E ++ N I + + +L +DLG +L
Sbjct: 95 LTTV-PTQAFEYLSK-LRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAF 152
Query: 207 GKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKLYGSIPACFGNLASLRILSLG 266
L L+ LNL L+ IP+ + L L LEL N+L P F L SLR L L
Sbjct: 153 EGLVNLRYLNLGMCNLK-DIPN-LTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLM 210
Query: 267 SNKLTSIPL-TFWNLKDILQLNFSSNFL 293
++ +I F +LK + +LN S N L
Sbjct: 211 HAQVATIERNAFDDLKSLEELNLSHNNL 238
Score = 32.3 bits (72), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 79/183 (43%), Gaps = 24/183 (13%)
Query: 58 LPNLEKLYLWGNNFSGTIPRFIFNA-SKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDE 116
LP+L L L+ N + T+P F SKL +L L N F + +L +L L E
Sbjct: 82 LPSLNTLELFDNRLT-TVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGE 140
Query: 117 ------------------NYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSIS 158
YL L + +L+ L ++LS N LD I P S
Sbjct: 141 LKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPNLTALVRLEELELSGNRLDLIRPG-SFQ 199
Query: 159 NLSRSLEEFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITL-GKLRKLQRLNL 217
L+ SL + ++ + ++ +L +L E++L N L S+P L L +L+R++L
Sbjct: 200 GLT-SLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNL-MSLPHDLFTPLHRLERVHL 257
Query: 218 EDN 220
N
Sbjct: 258 NHN 260
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 78/183 (42%), Gaps = 35/183 (19%)
Query: 200 GSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKLYGSIPACFGNLAS 259
SIP+ + LNL++N ++ D L L L+L N + F L S
Sbjct: 31 ASIPV------NTRYLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPS 84
Query: 260 LRILSLGSNKLTSIPL-TFWNLKDILQLNFSSN---------FLTGPLL--LEIGNLKVL 307
L L L N+LT++P F L + +L +N F P L L++G LK L
Sbjct: 85 LNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRL 144
Query: 308 IGIDFSMNNFSGVIP-----------REIGE--KLSYLEDLNLSFNKLKGEIPRGGSFGN 354
I S F G++ ++I L LE+L LS N+L ++ R GSF
Sbjct: 145 EYI--SEAAFEGLVNLRYLNLGMCNLKDIPNLTALVRLEELELSGNRL--DLIRPGSFQG 200
Query: 355 FSA 357
++
Sbjct: 201 LTS 203
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 63/128 (49%), Gaps = 13/128 (10%)
Query: 475 MKSIRHRNLIKVISSCS----NEEFKA-LVLEYMPHGSLEKYLYSSNCI-LDIFQRLNIM 528
+++ H N+++++ C+ + E K LV E++ L YL + L ++M
Sbjct: 68 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLM 126
Query: 529 IDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTL 588
L++LH + ++H DLKP N+L+ L+DF +A++ + + M T +
Sbjct: 127 RQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQ---MALTPVV 180
Query: 589 GTIGYMAP 596
T+ Y AP
Sbjct: 181 VTLWYRAP 188
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 498 LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVL 557
+V+EY+ GSL + + C +D Q + + ALE+LH S VIH ++K N+L
Sbjct: 95 VVMEYLAGGSLTDVV-TETC-MDEGQIAAVCRECLQALEFLH---SNQVIHRNIKSDNIL 149
Query: 558 LDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
L + L+DF +T E QS T +GT +MAP
Sbjct: 150 LGMDGSVKLTDFGFCAQITPE-QSKRST-MVGTPYWMAP 186
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 59/133 (44%), Gaps = 4/133 (3%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 522
+A K E +M S+ + ++ +++ C + L+ + MP G L Y+ +
Sbjct: 56 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ 114
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582
LN + +A + YL ++H DL NVL+ ++DF +AKLL E++
Sbjct: 115 YLLNWCVQIAEGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 171
Query: 583 TQTQTLGTIGYMA 595
I +MA
Sbjct: 172 HAEGGKVPIKWMA 184
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 59/133 (44%), Gaps = 4/133 (3%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 522
+A K E +M S+ + ++ +++ C + L+++ MP G L Y+ +
Sbjct: 63 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQ 121
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582
LN + +A + YL ++H DL NVL+ ++DF AKLL E++
Sbjct: 122 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEY 178
Query: 583 TQTQTLGTIGYMA 595
I +MA
Sbjct: 179 HAEGGKVPIKWMA 191
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/135 (20%), Positives = 59/135 (43%), Gaps = 12/135 (8%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILD---------I 521
E +MK ++++++ S + +V+E M HG L+ YL S + +
Sbjct: 70 EASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL 129
Query: 522 FQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQS 581
+ + + ++A + YL+ + +H DL N ++ + + DF + + + D
Sbjct: 130 QEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXX 186
Query: 582 MTQTQTLGTIGYMAP 596
+ L + +MAP
Sbjct: 187 RKGGKGLLPVRWMAP 201
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 65/146 (44%), Gaps = 18/146 (12%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQR- 524
+ F E + ++H N++ ++ + ++ +++ Y HG L ++L + D+
Sbjct: 74 EEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTD 133
Query: 525 --------------LNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFS 570
++++ +A+ +EYL S V+H DL NVL+ D + +SD
Sbjct: 134 DDRTVKSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKLNVKISDLG 190
Query: 571 IAKLLTGEDQSMTQTQTLGTIGYMAP 596
+ + + D +L I +MAP
Sbjct: 191 LFREVYAADYYKLLGNSLLPIRWMAP 216
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 81/199 (40%), Gaps = 58/199 (29%)
Query: 440 LCRATDEFSENNLIGRGGFALFIRAFKSFDVE---------------------------- 471
LCRA ++ IG G + + FK+ D++
Sbjct: 6 LCRADQQYECVAEIGEGAYG---KVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREV 62
Query: 472 --CEMMKSIRHRNLIKVISSCS----NEEFK-ALVLEYMPHGSLEKYL-------YSSNC 517
+++ H N++++ C+ + E K LV E++ L YL +
Sbjct: 63 AVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTET 121
Query: 518 ILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTG 577
I D+ M + L++LH S V+H DLKP N+L+ + L+DF +A++ +
Sbjct: 122 IKDM------MFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF 172
Query: 578 EDQSMTQTQTLGTIGYMAP 596
+ M T + T+ Y AP
Sbjct: 173 Q---MALTSVVVTLWYRAP 188
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +++++ L+K+ S + +V+EY+ G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ EYLH S +I+ DLKP N+++D ++DF AK + G + GT
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 591 IGYMAP 596
Y+AP
Sbjct: 202 PEYLAP 207
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Query: 470 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 529
E +++ ++H ++ +I + L+LEY+ G L L ++ +
Sbjct: 70 AERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACF-YLA 128
Query: 530 DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLG 589
+++ AL +LH +I+ DLKP N++L+ L+DF + K + D ++T G
Sbjct: 129 EISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCK-ESIHDGTVTHX-FCG 183
Query: 590 TIGYMAP 596
TI YMAP
Sbjct: 184 TIEYMAP 190
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 67/136 (49%), Gaps = 13/136 (9%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS---LEKYLYSS----NCILDIFQ 523
E + M H N++ +S ++ LV++ + GS + K++ + + +LD
Sbjct: 63 EIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDEST 122
Query: 524 RLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLL-TGEDQSM 582
I+ +V LEYLH IH D+K N+LL ++ ++DF ++ L TG D +
Sbjct: 123 IATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITR 179
Query: 583 TQTQT--LGTIGYMAP 596
+ + +GT +MAP
Sbjct: 180 NKVRKTFVGTPCWMAP 195
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 17/148 (11%)
Query: 463 RAFKSFDVECEMMKSI--RHRNLIKVISSCSNEEFKA----LVLEYMPHGSLEKYLYSSN 516
R +S+ E E+ +++ RH N++ I++ + + LV +Y HGSL YL
Sbjct: 37 REERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT 96
Query: 517 CILDIFQRLNIMIDVASALEYLHF------GYSALVIHCDLKPSNVLLDDNMVAHLSDFS 570
++ + + + AS L +LH G A+ H DLK N+L+ N ++D
Sbjct: 97 VTVEGM--IKLALSTASGLAHLHMEIVGTQGKPAIA-HRDLKSKNILVKKNGTCCIADLG 153
Query: 571 IA-KLLTGEDQ-SMTQTQTLGTIGYMAP 596
+A + + D + +GT YMAP
Sbjct: 154 LAVRHDSATDTIDIAPNHRVGTKRYMAP 181
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 56/136 (41%), Gaps = 9/136 (6%)
Query: 464 AFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL--YSSNCILDI 521
A F E M S+ HRNLI++ K +V E P GSL L + + +L
Sbjct: 54 AMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGT 112
Query: 522 FQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLL-TGEDQ 580
R + VA + YL S IH DL N+LL + + DF + + L +D
Sbjct: 113 LSRYAVQ--VAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 167
Query: 581 SMTQTQTLGTIGYMAP 596
+ Q + AP
Sbjct: 168 YVMQEHRKVPFAWCAP 183
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 56/136 (41%), Gaps = 9/136 (6%)
Query: 464 AFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL--YSSNCILDI 521
A F E M S+ HRNLI++ K +V E P GSL L + + +L
Sbjct: 58 AMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGT 116
Query: 522 FQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLL-TGEDQ 580
R + VA + YL S IH DL N+LL + + DF + + L +D
Sbjct: 117 LSRYAVQ--VAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 171
Query: 581 SMTQTQTLGTIGYMAP 596
+ Q + AP
Sbjct: 172 YVMQEHRKVPFAWCAP 187
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/135 (20%), Positives = 59/135 (43%), Gaps = 12/135 (8%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILD---------I 521
E +MK ++++++ S + +V+E M HG L+ YL S + +
Sbjct: 67 EASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL 126
Query: 522 FQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQS 581
+ + + ++A + YL+ + +H DL N ++ + + DF + + + D
Sbjct: 127 QEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXX 183
Query: 582 MTQTQTLGTIGYMAP 596
+ L + +MAP
Sbjct: 184 RKGGKGLLPVRWMAP 198
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/135 (20%), Positives = 59/135 (43%), Gaps = 12/135 (8%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILD---------I 521
E +MK ++++++ S + +V+E M HG L+ YL S + +
Sbjct: 70 EASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL 129
Query: 522 FQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQS 581
+ + + ++A + YL+ + +H DL N ++ + + DF + + + D
Sbjct: 130 QEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXX 186
Query: 582 MTQTQTLGTIGYMAP 596
+ L + +MAP
Sbjct: 187 RKGGKGLLPVRWMAP 201
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 59/133 (44%), Gaps = 4/133 (3%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 522
+A K E +M S+ + ++ +++ C + L+ + MP G L Y+ +
Sbjct: 53 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ 111
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582
LN + +A + YL ++H DL NVL+ ++DF +AKLL E++
Sbjct: 112 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 168
Query: 583 TQTQTLGTIGYMA 595
I +MA
Sbjct: 169 HAEGGKVPIKWMA 181
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 56/136 (41%), Gaps = 9/136 (6%)
Query: 464 AFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL--YSSNCILDI 521
A F E M S+ HRNLI++ K +V E P GSL L + + +L
Sbjct: 54 AMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGT 112
Query: 522 FQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLL-TGEDQ 580
R + VA + YL S IH DL N+LL + + DF + + L +D
Sbjct: 113 LSR--YAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 167
Query: 581 SMTQTQTLGTIGYMAP 596
+ Q + AP
Sbjct: 168 YVMQEHRKVPFAWCAP 183
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 60/126 (47%), Gaps = 6/126 (4%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++K ++H N++K+ ++ LV E++ L+K L L+ + ++
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQ 108
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ + + Y H V+H DLKP N+L++ ++DF +A+ + T + T
Sbjct: 109 LLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY--THEIVT 163
Query: 591 IGYMAP 596
+ Y AP
Sbjct: 164 LWYRAP 169
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 66/131 (50%), Gaps = 10/131 (7%)
Query: 471 ECEMMKSIRHRNLI---KVISSCSNEEFKAL-VLEYMPHGSLEKYLYSSNCILDIFQRLN 526
E +++ RH N+I +I + + E+ K + +++ + L K L + + D
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICY 132
Query: 527 IMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE-DQSMTQT 585
+ + L+Y+H SA V+H DLKPSN+LL+ + DF +A++ + D + T
Sbjct: 133 FLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 586 QTLGTIGYMAP 596
+ + T Y AP
Sbjct: 190 EYVATRWYRAP 200
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 81/199 (40%), Gaps = 58/199 (29%)
Query: 440 LCRATDEFSENNLIGRGGFALFIRAFKSFDVE---------------------------- 471
LCRA ++ IG G + + FK+ D++
Sbjct: 6 LCRADQQYECVAEIGEGAYG---KVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREV 62
Query: 472 --CEMMKSIRHRNLIKVISSCS----NEEFK-ALVLEYMPHGSLEKYL-------YSSNC 517
+++ H N++++ C+ + E K LV E++ L YL +
Sbjct: 63 AVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTET 121
Query: 518 ILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTG 577
I D+ M + L++LH S V+H DLKP N+L+ + L+DF +A++ +
Sbjct: 122 IKDM------MFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF 172
Query: 578 EDQSMTQTQTLGTIGYMAP 596
+ M T + T+ Y AP
Sbjct: 173 Q---MALTSVVVTLWYRAP 188
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 63/149 (42%), Gaps = 26/149 (17%)
Query: 471 ECEMMKSI-RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL-------------YSSN 516
E +MM + H N++ ++ +C+ L+ EY +G L YL Y +
Sbjct: 98 ELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQ 157
Query: 517 CILDIFQRLNIMI---------DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLS 567
L+ + LN++ VA +E+L F +H DL NVL+ V +
Sbjct: 158 KRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKIC 214
Query: 568 DFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
DF +A+ + + + + + +MAP
Sbjct: 215 DFGLARDIMSDSNYVVRGNARLPVKWMAP 243
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 66/131 (50%), Gaps = 10/131 (7%)
Query: 471 ECEMMKSIRHRNLI---KVISSCSNEEFKAL-VLEYMPHGSLEKYLYSSNCILDIFQRLN 526
E +++ RH N+I +I + + E+ K + +++ + L K L + + D
Sbjct: 76 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICY 133
Query: 527 IMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE-DQSMTQT 585
+ + L+Y+H SA V+H DLKPSN+LL+ + DF +A++ + D + T
Sbjct: 134 FLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 190
Query: 586 QTLGTIGYMAP 596
+ + T Y AP
Sbjct: 191 EYVATRWYRAP 201
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 66/131 (50%), Gaps = 10/131 (7%)
Query: 471 ECEMMKSIRHRNLI---KVISSCSNEEFKAL-VLEYMPHGSLEKYLYSSNCILDIFQRLN 526
E +++ RH N+I +I + + E+ K + +++ + L K L + + D
Sbjct: 77 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICY 134
Query: 527 IMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE-DQSMTQT 585
+ + L+Y+H SA V+H DLKPSN+LL+ + DF +A++ + D + T
Sbjct: 135 FLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 191
Query: 586 QTLGTIGYMAP 596
+ + T Y AP
Sbjct: 192 EYVATRWYRAP 202
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 66/131 (50%), Gaps = 10/131 (7%)
Query: 471 ECEMMKSIRHRNLI---KVISSCSNEEFKAL-VLEYMPHGSLEKYLYSSNCILDIFQRLN 526
E +++ RH N+I +I + + E+ K + +++ + L K L + + D
Sbjct: 68 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICY 125
Query: 527 IMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE-DQSMTQT 585
+ + L+Y+H SA V+H DLKPSN+LL+ + DF +A++ + D + T
Sbjct: 126 FLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 182
Query: 586 QTLGTIGYMAP 596
+ + T Y AP
Sbjct: 183 EYVATRWYRAP 193
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 66/131 (50%), Gaps = 10/131 (7%)
Query: 471 ECEMMKSIRHRNLI---KVISSCSNEEFKAL-VLEYMPHGSLEKYLYSSNCILDIFQRLN 526
E +++ RH N+I +I + + E+ K + +++ + L K L + + D
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICY 132
Query: 527 IMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE-DQSMTQT 585
+ + L+Y+H SA V+H DLKPSN+LL+ + DF +A++ + D + T
Sbjct: 133 FLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 586 QTLGTIGYMAP 596
+ + T Y AP
Sbjct: 190 EYVATRWYRAP 200
>pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4
pdb|2WFH|B Chain B, The Human Slit 2 Dimerization Domain D4
Length = 193
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 64/145 (44%), Gaps = 40/145 (27%)
Query: 107 RNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEE 166
R++ +L LD N T ELS N K LTLIDLSNN IS LS
Sbjct: 31 RDVTELYLDGNQFTLVPKELS------NYKHLTLIDLSNN---------RISTLSN---- 71
Query: 167 FYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDN----IL 222
+ SN+T L+ + L N+L P T L+ L+ L+L N +
Sbjct: 72 -------------QSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVP 118
Query: 223 EGSIPDDICRLAELYRLELGSNKLY 247
EG+ D L+ L L +G+N LY
Sbjct: 119 EGAFND----LSALSHLAIGANPLY 139
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 6/132 (4%)
Query: 139 TLIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCNISGGIPEEISNLTNLVEIDLGGNKL 198
T++ SN L +LPK + R + E Y+ + N +P+E+SN +L IDL N++
Sbjct: 13 TVVRCSNKGLK-VLPK----GIPRDVTELYL-DGNQFTLVPKELSNYKHLTLIDLSNNRI 66
Query: 199 NGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKLYGSIPACFGNLA 258
+ + + +L L L N L P L L L L N + F +L+
Sbjct: 67 STLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLS 126
Query: 259 SLRILSLGSNKL 270
+L L++G+N L
Sbjct: 127 ALSHLAIGANPL 138
Score = 36.2 bits (82), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 7/98 (7%)
Query: 177 GIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAEL 236
GIP +++ E+ L GN+ +P L + L ++L +N + + +L
Sbjct: 28 GIPRDVT------ELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQL 80
Query: 237 YRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSIP 274
L L N+L P F L SLR+LSL N ++ +P
Sbjct: 81 LTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVP 118
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 7/102 (6%)
Query: 60 NLEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYL 119
++ +LYL GN F+ +P+ + N L+ + L N S +F N+ L L L N L
Sbjct: 32 DVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRL 90
Query: 120 TSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLS 161
P + KSL L+ L N + ++P+ + ++LS
Sbjct: 91 RCIPPR-----TFDGLKSLRLLSLHGNDI-SVVPEGAFNDLS 126
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 20/134 (14%)
Query: 470 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS-LEKYLYSSNCILDIFQRLN-- 526
+E ++ + H N+IKV+ N+ F LV+E HGS L+ + + +D RL+
Sbjct: 78 LEIAILSRVEHANIIKVLDIFENQGFFQLVME--KHGSGLDLFAF-----IDRHPRLDEP 130
Query: 527 ----IMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582
I + SA+ YL +IH D+K N+++ ++ L DF A L ++
Sbjct: 131 LASYIFRQLVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYL---ERGK 184
Query: 583 TQTQTLGTIGYMAP 596
GTI Y AP
Sbjct: 185 LFYTFCGTIEYCAP 198
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 66/131 (50%), Gaps = 10/131 (7%)
Query: 471 ECEMMKSIRHRNLI---KVISSCSNEEFKAL-VLEYMPHGSLEKYLYSSNCILDIFQRLN 526
E +++ RH N+I +I + + E+ K + +++ + L K L + + D
Sbjct: 73 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICY 130
Query: 527 IMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE-DQSMTQT 585
+ + L+Y+H SA V+H DLKPSN+LL+ + DF +A++ + D + T
Sbjct: 131 FLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 187
Query: 586 QTLGTIGYMAP 596
+ + T Y AP
Sbjct: 188 EYVATRWYRAP 198
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 63/126 (50%), Gaps = 5/126 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++K + H N++K++ E LV E++ L+K++ ++ + I L I
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEHVDQ-DLKKFM-DASALTGIPLPL-IKSY 111
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ L+ L F +S V+H DLKP N+L++ L+DF +A+ + T + T
Sbjct: 112 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVT 169
Query: 591 IGYMAP 596
+ Y AP
Sbjct: 170 LWYRAP 175
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 66/131 (50%), Gaps = 10/131 (7%)
Query: 471 ECEMMKSIRHRNLI---KVISSCSNEEFKAL-VLEYMPHGSLEKYLYSSNCILDIFQRLN 526
E +++ RH N+I +I + + E+ K + +++ + L K L + + D
Sbjct: 91 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICY 148
Query: 527 IMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE-DQSMTQT 585
+ + L+Y+H SA V+H DLKPSN+LL+ + DF +A++ + D + T
Sbjct: 149 FLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 205
Query: 586 QTLGTIGYMAP 596
+ + T Y AP
Sbjct: 206 EYVATRWYRAP 216
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 66/131 (50%), Gaps = 10/131 (7%)
Query: 471 ECEMMKSIRHRNLI---KVISSCSNEEFKAL-VLEYMPHGSLEKYLYSSNCILDIFQRLN 526
E +++ RH N+I +I + + E+ K + +++ + L K L + + D
Sbjct: 69 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICY 126
Query: 527 IMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE-DQSMTQT 585
+ + L+Y+H SA V+H DLKPSN+LL+ + DF +A++ + D + T
Sbjct: 127 FLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 183
Query: 586 QTLGTIGYMAP 596
+ + T Y AP
Sbjct: 184 EYVATRWYRAP 194
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 66/131 (50%), Gaps = 10/131 (7%)
Query: 471 ECEMMKSIRHRNLI---KVISSCSNEEFKAL-VLEYMPHGSLEKYLYSSNCILDIFQRLN 526
E +++ RH N+I +I + + E+ K + +++ + L K L + + D
Sbjct: 69 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICY 126
Query: 527 IMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE-DQSMTQT 585
+ + L+Y+H SA V+H DLKPSN+LL+ + DF +A++ + D + T
Sbjct: 127 FLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 183
Query: 586 QTLGTIGYMAP 596
+ + T Y AP
Sbjct: 184 EYVATRWYRAP 194
>pdb|3V47|A Chain A, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
pdb|3V47|B Chain B, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
Length = 455
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 11/115 (9%)
Query: 240 ELGSNKLYGSIPACFGNLASLRILSLGSNKLTSIPL-TFWNLKDILQLNFSSNFLTGPLL 298
+L +K++ + + F + L L+L N++ I FW L +L+LN S NFL
Sbjct: 281 DLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDS 340
Query: 299 LEIGNLKVLIGIDFSMNNFSGVIPREIGEK----LSYLEDLNLSFNKLKGEIPRG 349
NL L +D S N+ R +G++ L L++L L N+LK +P G
Sbjct: 341 RMFENLDKLEVLDLSYNHI-----RALGDQSFLGLPNLKELALDTNQLKS-VPDG 389
Score = 35.4 bits (80), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 50/110 (45%), Gaps = 9/110 (8%)
Query: 58 LPNLEKLYLWGNNFSGTIPRFIF-NASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDE 116
L +L KL L NF G+I +F N KL L L N +F L NL++L LD
Sbjct: 322 LTHLLKLNL-SQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDT 380
Query: 117 NYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEE 166
N L S P+ F SL I L NP D P+ I LSR L +
Sbjct: 381 NQL-KSVPDGIF----DRLTSLQKIWLHTNPWDCSCPR--IDYLSRWLNK 423
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 56/135 (41%), Gaps = 22/135 (16%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL--NIM 528
E + K + H N++K + L LEY G L F R+ +I
Sbjct: 54 EIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIG 100
Query: 529 IDVASALEYLHFGYSALV-------IHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQS 581
+ A + H + +V H D+KP N+LLD+ +SDF +A + ++
Sbjct: 101 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 582 MTQTQTLGTIGYMAP 596
+ GT+ Y+AP
Sbjct: 161 RLLNKMXGTLPYVAP 175
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 56/135 (41%), Gaps = 22/135 (16%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL--NIM 528
E + K + H N++K + L LEY G L F R+ +I
Sbjct: 55 EIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIG 101
Query: 529 IDVASALEYLHFGYSALV-------IHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQS 581
+ A + H + +V H D+KP N+LLD+ +SDF +A + ++
Sbjct: 102 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161
Query: 582 MTQTQTLGTIGYMAP 596
+ GT+ Y+AP
Sbjct: 162 RLLNKMXGTLPYVAP 176
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 66/131 (50%), Gaps = 10/131 (7%)
Query: 471 ECEMMKSIRHRNLI---KVISSCSNEEFKAL-VLEYMPHGSLEKYLYSSNCILDIFQRLN 526
E +++ RH N+I +I + + E+ K + +++ + L K L + + D
Sbjct: 79 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICY 136
Query: 527 IMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE-DQSMTQT 585
+ + L+Y+H SA V+H DLKPSN+LL+ + DF +A++ + D + T
Sbjct: 137 FLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 193
Query: 586 QTLGTIGYMAP 596
+ + T Y AP
Sbjct: 194 EYVATRWYRAP 204
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 66/131 (50%), Gaps = 10/131 (7%)
Query: 471 ECEMMKSIRHRNLI---KVISSCSNEEFKAL-VLEYMPHGSLEKYLYSSNCILDIFQRLN 526
E +++ RH N+I +I + + E+ K + +++ + L K L + + D
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICY 128
Query: 527 IMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE-DQSMTQT 585
+ + L+Y+H SA V+H DLKPSN+LL+ + DF +A++ + D + T
Sbjct: 129 FLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 185
Query: 586 QTLGTIGYMAP 596
+ + T Y AP
Sbjct: 186 EYVATRWYRAP 196
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 60/126 (47%), Gaps = 6/126 (4%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++K ++H N++K+ ++ LV E++ L+K L L+ + ++
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQ 108
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ + + Y H V+H DLKP N+L++ ++DF +A+ + T + T
Sbjct: 109 LLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY--THEVVT 163
Query: 591 IGYMAP 596
+ Y AP
Sbjct: 164 LWYRAP 169
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 62/130 (47%), Gaps = 18/130 (13%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++ +RH N I+ E LV+EY L S++ +L++ ++ ++
Sbjct: 104 EVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC--------LGSASDLLEVHKKPLQEVE 155
Query: 531 VAS----ALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQ 586
+A+ AL+ L + +S +IH D+K N+LL + + L DF A ++
Sbjct: 156 IAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA------PANX 209
Query: 587 TLGTIGYMAP 596
+GT +MAP
Sbjct: 210 FVGTPYWMAP 219
>pdb|2ID5|A Chain A, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|B Chain B, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|C Chain C, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|D Chain D, Crystal Structure Of The Lingo-1 Ectodomain
Length = 477
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 14/114 (12%)
Query: 215 LNLEDNILEGSIPDDICRLAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSIP 274
L+L N ++ D+ L LEL N + P F NL +LR L L SN+L IP
Sbjct: 37 LDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIP 96
Query: 275 L-TFWNLKDILQLNFSSNFLTGPLLLEIGNLKVLIGIDFSMNNFSGVIPREIGE 327
L F L ++ +L+ S N K++I +D+ + + E+G+
Sbjct: 97 LGVFTGLSNLTKLDISEN-------------KIVILLDYMFQDLYNLKSLEVGD 137
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 131/338 (38%), Gaps = 61/338 (18%)
Query: 58 LPNLEKLYLWGNNFSGTIPRFIFNA-SKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDE 116
+P +L G N T+ + F + L +L L N S P F NL NL LGL
Sbjct: 30 IPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRS 89
Query: 117 NYLTSSTPELSFLSSLSNCKSLTLIDLSNNPL--------------------DGILPKTS 156
N L L + LSN LT +D+S N + D L S
Sbjct: 90 NRL--KLIPLGVFTGLSN---LTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYIS 144
Query: 157 ISNLS--RSLEEFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQR 214
S SLE+ + CN++ E +S+L L+ + L +N + +L +L+
Sbjct: 145 HRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKV 204
Query: 215 LNLEDNILEGSIPDDICRLAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSIP 274
L + P Y + N LYG NL S LS+ LT++P
Sbjct: 205 LEI------SHWP---------YLDTMTPNCLYGL------NLTS---LSITHCNLTAVP 240
Query: 275 -LTFWNLKDILQLNFSSNFLT---GPLLLEIGNLKVLIGIDFSMNNFSGVIPREIGEKLS 330
L +L + LN S N ++ G +L E+ L+ I + V P L+
Sbjct: 241 YLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQ---EIQLVGGQLAVVEPYAF-RGLN 296
Query: 331 YLEDLNLSFNKLKG-EIPRGGSFGNFSAESFEGNELLC 367
YL LN+S N+L E S GN + N L C
Sbjct: 297 YLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLAC 334
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 96/251 (38%), Gaps = 21/251 (8%)
Query: 58 LPNLEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDEN 117
L NL KL + N + + L L +G N F L +LEQL L++
Sbjct: 103 LSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKC 162
Query: 118 YLTS-STPELSFLS------------------SLSNCKSLTLIDLSNNPLDGILPKTSIS 158
LTS T LS L S L ++++S+ P + +
Sbjct: 163 NLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLY 222
Query: 159 NLSRSLEEFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLE 218
L+ L + +CN++ + +L L ++L N ++ L +L +LQ + L
Sbjct: 223 GLN--LTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLV 280
Query: 219 DNILEGSIPDDICRLAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSIPLTFW 278
L P L L L + N+L + F ++ +L L L SN L W
Sbjct: 281 GGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLW 340
Query: 279 NLKDILQLNFS 289
+ +LNF+
Sbjct: 341 VFRRRWRLNFN 351
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 63/126 (50%), Gaps = 5/126 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++K + H N++K++ E LV E++ L+K++ ++ + I L I
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFM-DASALTGIPLPL-IKSY 111
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ L+ L F +S V+H DLKP N+L++ L+DF +A+ + T + T
Sbjct: 112 LFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVT 169
Query: 591 IGYMAP 596
+ Y AP
Sbjct: 170 LWYRAP 175
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 60/126 (47%), Gaps = 6/126 (4%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++K ++H N++K+ ++ LV E++ L+K L L+ + ++
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQ 108
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ + + Y H V+H DLKP N+L++ ++DF +A+ + T + T
Sbjct: 109 LLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY--THEVVT 163
Query: 591 IGYMAP 596
+ Y AP
Sbjct: 164 LWYRAP 169
>pdb|3G3B|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|C Chain C, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|E Chain E, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|G Chain G, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
Length = 170
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 64 LYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTSST 123
LYL+ N + P ++L++L L N + F L L QL L++N L S
Sbjct: 35 LYLYDNRITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQL-KSI 93
Query: 124 PELSFLSSLSNCKSLTLIDLSNNPLD 149
P +F N +SLT I L NNP D
Sbjct: 94 PRGAF----DNLRSLTHIWLLNNPWD 115
Score = 38.5 bits (88), Expect = 0.010, Method: Composition-based stats.
Identities = 35/102 (34%), Positives = 47/102 (46%), Gaps = 4/102 (3%)
Query: 191 IDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKLYGSI 250
+D G L S+P G Q L L DN + P RL +L RL+L +N+L
Sbjct: 14 VDCSGKSL-ASVPT--GIPTTTQVLYLYDNRITKLEPGVFDRLTQLTRLDLDNNQLTVLP 70
Query: 251 PACFGNLASLRILSLGSNKLTSIPL-TFWNLKDILQLNFSSN 291
F L L LSL N+L SIP F NL+ + + +N
Sbjct: 71 AGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLRSLTHIWLLNN 112
Score = 33.5 bits (75), Expect = 0.34, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 133 SNCK-SLTLIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCNISGGIPEEISNLTNLVEI 191
S C S T +D S L + T I ++ L Y+Y+ I+ P LT L +
Sbjct: 5 SQCSCSGTTVDCSGKSLASV--PTGIPTTTQVL---YLYDNRITKLEPGVFDRLTQLTRL 59
Query: 192 DLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIP 227
DL N+L KL +L +L+L DN L+ SIP
Sbjct: 60 DLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLK-SIP 94
Score = 29.6 bits (65), Expect = 5.0, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 57 RLPNLEKLYLWGNNFSGTIPRFIFNA-SKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLD 115
RL L +L L N + +P +F+ ++L++LSL N F NLR+L + L
Sbjct: 52 RLTQLTRLDLDNNQLT-VLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLRSLTHIWLL 110
Query: 116 ENYLTSSTPELSFLS 130
N + ++ +LS
Sbjct: 111 NNPWDCACSDILYLS 125
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 66/131 (50%), Gaps = 10/131 (7%)
Query: 471 ECEMMKSIRHRNLI---KVISSCSNEEFKAL-VLEYMPHGSLEKYLYSSNCILDIFQRLN 526
E +++ RH N+I +I + + E+ K + +++ + L K L + + D
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICY 128
Query: 527 IMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE-DQSMTQT 585
+ + L+Y+H SA V+H DLKPSN+LL+ + DF +A++ + D + T
Sbjct: 129 FLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 185
Query: 586 QTLGTIGYMAP 596
+ + T Y AP
Sbjct: 186 EYVATRWYRAP 196
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 63/126 (50%), Gaps = 5/126 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++K + H N++K++ E LV E++ L+K++ ++ + I L I
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFM-DASALTGIPLPL-IKSY 109
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ L+ L F +S V+H DLKP N+L++ L+DF +A+ + T + T
Sbjct: 110 LFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVT 167
Query: 591 IGYMAP 596
+ Y AP
Sbjct: 168 LWYRAP 173
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 19/143 (13%)
Query: 464 AFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL---EKYLY----SSN 516
+ F E +++ I++ + +N + ++ EYM + S+ ++Y + +
Sbjct: 86 KYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYT 145
Query: 517 CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT 576
C + I I+ V ++ Y+H + H D+KPSN+L+D N LSDF
Sbjct: 146 CFIPIQVIKCIIKSVLNSFSYIH--NEKNICHRDVKPSNILMDKNGRVKLSDF------- 196
Query: 577 GEDQSMTQTQ---TLGTIGYMAP 596
GE + M + + GT +M P
Sbjct: 197 GESEYMVDKKIKGSRGTYEFMPP 219
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 54/130 (41%), Gaps = 22/130 (16%)
Query: 476 KSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL--NIMIDVAS 533
K + H N++K + L LEY G L F R+ +I +
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPD 105
Query: 534 ALEYLHFGYSALV-------IHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQ 586
A + H + +V H D+KP N+LLD+ +SDF +A + ++ +
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 587 TLGTIGYMAP 596
GT+ Y+AP
Sbjct: 166 MCGTLPYVAP 175
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 56/135 (41%), Gaps = 22/135 (16%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL--NIM 528
E + K + H N++K + L LEY G L F R+ +I
Sbjct: 54 EIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIG 100
Query: 529 IDVASALEYLHFGYSALV-------IHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQS 581
+ A + H + +V H D+KP N+LLD+ +SDF +A + ++
Sbjct: 101 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 582 MTQTQTLGTIGYMAP 596
+ GT+ Y+AP
Sbjct: 161 RLLNKMCGTLPYVAP 175
>pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R2.1 In Complex With Hen Egg Lysozyme
Length = 251
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 59/104 (56%), Gaps = 9/104 (8%)
Query: 174 ISGGIPEEISNLTNLVEIDLGGNKLNGSIPI-TLGKLRKLQRLNLEDNILEGSIPDDIC- 231
+S G+ +LT L + L N+L S+P+ L +L +L L N L+ S+P +
Sbjct: 74 LSAGV---FDDLTELGTLGLANNQL-ASLPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFD 128
Query: 232 RLAELYRLELGSNKLYGSIPA-CFGNLASLRILSLGSNKLTSIP 274
RL +L L L +N+L SIPA F L +L+ LSL +N+L S+P
Sbjct: 129 RLTKLKELRLNTNQLQ-SIPAGAFDKLTNLQTLSLSTNQLQSVP 171
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 81/182 (44%), Gaps = 10/182 (5%)
Query: 190 EIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICR-LAELYRLELGSNKLYG 248
E+D G L+ S+P G ++L+L+ L ++ D R L +L L L N+L
Sbjct: 18 EVDCQGKSLD-SVPS--GIPADTEKLDLQSTGL-ATLSDATFRGLTKLTWLNLDYNQLQT 73
Query: 249 SIPACFGNLASLRILSLGSNKLTSIPL-TFWNLKDILQLNFSSNFLTGPLLLEIGNLKVL 307
F +L L L L +N+L S+PL F +L + +L N L L L
Sbjct: 74 LSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKL 133
Query: 308 IGIDFSMNNFSGVIPREIGEKLSYLEDLNLSFNKLKGEIPRGG--SFGNFSAESFEGNEL 365
+ + N IP +KL+ L+ L+LS N+L+ +P G G + GN+
Sbjct: 134 KELRLNTNQLQS-IPAGAFDKLTNLQTLSLSTNQLQ-SVPHGAFDRLGKLQTITLFGNQF 191
Query: 366 LC 367
C
Sbjct: 192 DC 193
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 57 RLPNLEKLYLWGNNFSGTIPRFIFNA-SKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLD 115
L L+KLYL GN ++P +F+ +KL +L L N F L NL+ L L
Sbjct: 105 HLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLS 163
Query: 116 ENYLTSSTPELSF 128
N L S P +F
Sbjct: 164 TNQL-QSVPHGAF 175
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%)
Query: 184 NLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGS 243
+LT L ++ LGGN+L +L KL+ L L N L+ +L L L L +
Sbjct: 105 HLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLST 164
Query: 244 NKLYGSIPACFGNLASLRILSLGSNK 269
N+L F L L+ ++L N+
Sbjct: 165 NQLQSVPHGAFDRLGKLQTITLFGNQ 190
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 54/130 (41%), Gaps = 22/130 (16%)
Query: 476 KSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL--NIMIDVAS 533
K + H N++K + L LEY G L F R+ +I +
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPD 106
Query: 534 ALEYLHFGYSALV-------IHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQ 586
A + H + +V H D+KP N+LLD+ +SDF +A + ++ +
Sbjct: 107 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 587 TLGTIGYMAP 596
GT+ Y+AP
Sbjct: 167 MCGTLPYVAP 176
>pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
pdb|3M19|B Chain B, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
Length = 251
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 59/104 (56%), Gaps = 9/104 (8%)
Query: 174 ISGGIPEEISNLTNLVEIDLGGNKLNGSIPI-TLGKLRKLQRLNLEDNILEGSIPDDIC- 231
+S G+ +LT L + L N+L S+P+ L +L +L L N L+ S+P +
Sbjct: 74 LSAGV---FDDLTELGTLGLANNQL-ASLPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFD 128
Query: 232 RLAELYRLELGSNKLYGSIPA-CFGNLASLRILSLGSNKLTSIP 274
RL +L L L +N+L SIPA F L +L+ LSL +N+L S+P
Sbjct: 129 RLTKLKELRLNTNQLQ-SIPAGAFDKLTNLQTLSLSTNQLQSVP 171
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 81/182 (44%), Gaps = 10/182 (5%)
Query: 190 EIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICR-LAELYRLELGSNKLYG 248
E+D G L+ S+P G ++L+L+ L ++ D R L +L L L N+L
Sbjct: 18 EVDCQGKSLD-SVPS--GIPADTEKLDLQSTGL-ATLSDATFRGLTKLTWLNLDYNQLQT 73
Query: 249 SIPACFGNLASLRILSLGSNKLTSIPL-TFWNLKDILQLNFSSNFLTGPLLLEIGNLKVL 307
F +L L L L +N+L S+PL F +L + +L N L L L
Sbjct: 74 LSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKL 133
Query: 308 IGIDFSMNNFSGVIPREIGEKLSYLEDLNLSFNKLKGEIPRGG--SFGNFSAESFEGNEL 365
+ + N IP +KL+ L+ L+LS N+L+ +P G G + GN+
Sbjct: 134 KELRLNTNQLQS-IPAGAFDKLTNLQTLSLSTNQLQ-SVPHGAFDRLGKLQTITLFGNQF 191
Query: 366 LC 367
C
Sbjct: 192 DC 193
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 57 RLPNLEKLYLWGNNFSGTIPRFIFNA-SKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLD 115
L L+KLYL GN ++P +F+ +KL +L L N F L NL+ L L
Sbjct: 105 HLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLS 163
Query: 116 ENYLTSSTPELSF 128
N L S P +F
Sbjct: 164 TNQL-QSVPHGAF 175
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%)
Query: 184 NLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGS 243
+LT L ++ LGGN+L +L KL+ L L N L+ +L L L L +
Sbjct: 105 HLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLST 164
Query: 244 NKLYGSIPACFGNLASLRILSLGSNK 269
N+L F L L+ ++L N+
Sbjct: 165 NQLQSVPHGAFDRLGKLQTITLFGNQ 190
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 53/113 (46%), Gaps = 4/113 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++M + + ++++I C E LV+E G L K+L + + ++
Sbjct: 386 EAQIMHQLDNPYIVRLIGVCQAEAL-MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQ 444
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMT 583
V+ ++YL +H +L NVLL + A +SDF ++K L +D T
Sbjct: 445 VSMGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYT 494
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 54/130 (41%), Gaps = 22/130 (16%)
Query: 476 KSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL--NIMIDVAS 533
K + H N++K + L LEY G L F R+ +I +
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPD 106
Query: 534 ALEYLHFGYSALV-------IHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQ 586
A + H + +V H D+KP N+LLD+ +SDF +A + ++ +
Sbjct: 107 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 587 TLGTIGYMAP 596
GT+ Y+AP
Sbjct: 167 MCGTLPYVAP 176
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 54/130 (41%), Gaps = 22/130 (16%)
Query: 476 KSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL--NIMIDVAS 533
K + H N++K + L LEY G L F R+ +I +
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPD 106
Query: 534 ALEYLHFGYSALV-------IHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQ 586
A + H + +V H D+KP N+LLD+ +SDF +A + ++ +
Sbjct: 107 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 587 TLGTIGYMAP 596
GT+ Y+AP
Sbjct: 167 MCGTLPYVAP 176
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 54/130 (41%), Gaps = 22/130 (16%)
Query: 476 KSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL--NIMIDVAS 533
K + H N++K + L LEY G L F R+ +I +
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPD 106
Query: 534 ALEYLHFGYSALV-------IHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQ 586
A + H + +V H D+KP N+LLD+ +SDF +A + ++ +
Sbjct: 107 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 587 TLGTIGYMAP 596
GT+ Y+AP
Sbjct: 167 MCGTLPYVAP 176
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 70/143 (48%), Gaps = 14/143 (9%)
Query: 458 FALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSNEEFKALVLEYMPHGSLEKYLY 513
F I A +++ E ++K ++H N+I ++ + S E+F + L G+ +
Sbjct: 65 FQSLIHARRTYR-ELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIV 123
Query: 514 SSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAK 573
+ D + ++ + L+Y+H SA +IH DLKPSNV ++++ + DF +A+
Sbjct: 124 KCQALSDEHVQF-LVYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLAR 179
Query: 574 LLTGEDQSMTQTQTLGTIGYMAP 596
D+ M T + T Y AP
Sbjct: 180 ---QADEEM--TGYVATRWYRAP 197
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 54/130 (41%), Gaps = 22/130 (16%)
Query: 476 KSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL--NIMIDVAS 533
K + H N++K + L LEY G L F R+ +I +
Sbjct: 58 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPD 104
Query: 534 ALEYLHFGYSALV-------IHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQ 586
A + H + +V H D+KP N+LLD+ +SDF +A + ++ +
Sbjct: 105 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 164
Query: 587 TLGTIGYMAP 596
GT+ Y+AP
Sbjct: 165 MCGTLPYVAP 174
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 80/189 (42%), Gaps = 43/189 (22%)
Query: 444 TDEFSENNLIGRGGFALF-------------IRAFKSFDV---------ECEMMKSIRHR 481
+ +F +L+G G + + I+ + FD E +++K +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 482 NLIKVISSCSNEEFK----ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEY 537
N+I + + + F+ +++ + L + + + D Q + A++
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYF--IYQTLRAVKV 127
Query: 538 LHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLL----------TGEDQSMTQTQT 587
LH + VIH DLKPSN+L++ N + DF +A+++ TG+ M T+
Sbjct: 128 LH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM--TEX 182
Query: 588 LGTIGYMAP 596
+ T Y AP
Sbjct: 183 VATRWYRAP 191
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 22/137 (16%)
Query: 471 ECEMMKSIRHRNLI---KVISSCSNEEFKALVLEYMPHGSLEKYLYS-------SNCILD 520
E +++ RH N+I +I + + E+ K + Y+ +E LY SN +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDV---YIVQDLMETDLYKLLKCQHLSNDHIC 131
Query: 521 IFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE-D 579
F + + L+Y+H SA V+H DLKPSN+LL+ + DF +A++ + D
Sbjct: 132 YF-----LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD 183
Query: 580 QSMTQTQTLGTIGYMAP 596
+ T+ + T Y AP
Sbjct: 184 HTGFLTEYVATRWYRAP 200
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 58/133 (43%), Gaps = 4/133 (3%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 522
+A K E +M S+ + ++ +++ C + L+ + MP G L Y+ +
Sbjct: 61 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ 119
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582
LN + +A + YL ++H DL NVL+ ++DF AKLL E++
Sbjct: 120 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEY 176
Query: 583 TQTQTLGTIGYMA 595
I +MA
Sbjct: 177 HAEGGKVPIKWMA 189
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 54/130 (41%), Gaps = 22/130 (16%)
Query: 476 KSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL--NIMIDVAS 533
K + H N++K + L LEY G L F R+ +I +
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPD 105
Query: 534 ALEYLHFGYSALV-------IHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQ 586
A + H + +V H D+KP N+LLD+ +SDF +A + ++ +
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 587 TLGTIGYMAP 596
GT+ Y+AP
Sbjct: 166 MXGTLPYVAP 175
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 54/130 (41%), Gaps = 22/130 (16%)
Query: 476 KSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL--NIMIDVAS 533
K + H N++K + L LEY G L F R+ +I +
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPD 105
Query: 534 ALEYLHFGYSALV-------IHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQ 586
A + H + +V H D+KP N+LLD+ +SDF +A + ++ +
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 587 TLGTIGYMAP 596
GT+ Y+AP
Sbjct: 166 MCGTLPYVAP 175
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 66/136 (48%), Gaps = 13/136 (9%)
Query: 465 FKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQR 524
+ + VE E++ + H ++K++ + ++ +++E+ P G+++ + + L Q
Sbjct: 52 LEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQ- 110
Query: 525 LNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIA----KLLTGEDQ 580
I + LE L+F +S +IH DLK NVL+ L+DF ++ K L D
Sbjct: 111 --IQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRD- 167
Query: 581 SMTQTQTLGTIGYMAP 596
+GT +MAP
Sbjct: 168 -----SFIGTPYWMAP 178
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 54/130 (41%), Gaps = 22/130 (16%)
Query: 476 KSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL--NIMIDVAS 533
K + H N++K + L LEY G L F R+ +I +
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPD 105
Query: 534 ALEYLHFGYSALV-------IHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQ 586
A + H + +V H D+KP N+LLD+ +SDF +A + ++ +
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 587 TLGTIGYMAP 596
GT+ Y+AP
Sbjct: 166 MCGTLPYVAP 175
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 77/180 (42%), Gaps = 33/180 (18%)
Query: 444 TDEFSENNLIGRGGFALF-------------IRAFKSFDV---------ECEMMKSIRHR 481
+ +F +L+G G + + I+ + FD E +++K +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 482 NLIKVISSCSNEEFK----ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEY 537
N+I + + + F+ +++ + L + + + D Q + A++
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYF--IYQTLRAVKV 127
Query: 538 LHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLL--TGEDQSMTQTQTLGTIGYMA 595
LH + VIH DLKPSN+L++ N + DF +A+++ + D S Q G Y+A
Sbjct: 128 LH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVA 184
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 70/143 (48%), Gaps = 14/143 (9%)
Query: 458 FALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSNEEFKALVLEYMPHGSLEKYLY 513
F I A +++ E ++K ++H N+I ++ + S E+F + L G+ +
Sbjct: 57 FQSLIHARRTYR-ELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIV 115
Query: 514 SSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAK 573
+ D + ++ + L+Y+H SA +IH DLKPSNV ++++ + DF +A+
Sbjct: 116 KCQALSDEHVQF-LVYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLAR 171
Query: 574 LLTGEDQSMTQTQTLGTIGYMAP 596
D+ M T + T Y AP
Sbjct: 172 ---QADEEM--TGYVATRWYRAP 189
>pdb|2Z7X|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 520
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 88/193 (45%), Gaps = 30/193 (15%)
Query: 72 SGTIPRFIFNASKLS---KLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSF 128
SGT + SK+S L N + + G+L LE L L N L ELS
Sbjct: 310 SGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQL----KELSK 365
Query: 129 LSSLS-NCKSLTLIDLSNNPL-------DGILPKTSIS-NLSRSLEEFYMYNCNISGGIP 179
++ ++ KSL +D+S N + D K+ +S N+S ++ ++ C +P
Sbjct: 366 IAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRC-----LP 420
Query: 180 EEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDIC-RLAELYR 238
I L DL NK+ SIP + KL LQ LN+ N L+ S+PD I RL L +
Sbjct: 421 PRIKVL------DLHSNKI-KSIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQK 472
Query: 239 LELGSNKLYGSIP 251
+ L +N S P
Sbjct: 473 IWLHTNPWDCSCP 485
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 5/123 (4%)
Query: 174 ISGGIPEEISNLTNLVEIDLGGNKLN--GSIPITLGKLRKLQRLNLEDNILEGSIPDDIC 231
++ + E +LT L + L N+L I +++ LQ+L++ N + C
Sbjct: 336 LTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDC 395
Query: 232 RLAE-LYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSIPLTFWNLKDILQLNFSS 290
+ L L + SN L +I C +++L L SNK+ SIP L+ + +LN +S
Sbjct: 396 SWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIKSIPKQVVKLEALQELNVAS 453
Query: 291 NFL 293
N L
Sbjct: 454 NQL 456
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 13/149 (8%)
Query: 207 GKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKL--YGSIPACFGNLASLRILS 264
K+ L+ +N+L ++ ++ L EL L L N+L I + SL+ L
Sbjct: 321 SKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLD 380
Query: 265 LGSNKLTSIPLT---FWNLKDILQLNFSSNFLTGPLLLEIG-NLKVLIGIDFSMNNFSGV 320
+ N ++ W K +L LN SSN LT + + +KVL D N
Sbjct: 381 ISQNSVSYDEKKGDCSWT-KSLLSLNMSSNILTDTIFRCLPPRIKVL---DLHSNKIKS- 435
Query: 321 IPREIGEKLSYLEDLNLSFNKLKGEIPRG 349
IP+++ KL L++LN++ N+LK +P G
Sbjct: 436 IPKQVV-KLEALQELNVASNQLKS-VPDG 462
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 12/104 (11%)
Query: 176 GGIPEEISNLTNLVEIDLGGNKLN-----GSIPITLGKLRKLQRLNLEDNILEGSIPDDI 230
I E + + +L ++D+ N ++ G T + L LN+ NIL +I
Sbjct: 364 SKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWT----KSLLSLNMSSNILTDTIFR-- 417
Query: 231 CRLAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSIP 274
C + L+L SNK+ SIP L +L+ L++ SN+L S+P
Sbjct: 418 CLPPRIKVLDLHSNKI-KSIPKQVVKLEALQELNVASNQLKSVP 460
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 66/139 (47%), Gaps = 7/139 (5%)
Query: 134 NCKSLTLID---LSNNPLDGILPKTSISNLSRSLEEFYMYNCNISGGIPE-EISNLTNLV 189
NC LT ++ L N L + ++ +SL++ + ++S + + S +L+
Sbjct: 343 NCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLL 402
Query: 190 EIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKLYGS 249
+++ N L +I L +++ L+L N ++ SIP + +L L L + SN+L
Sbjct: 403 SLNMSSNILTDTIFRCLPP--RIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSV 459
Query: 250 IPACFGNLASLRILSLGSN 268
F L SL+ + L +N
Sbjct: 460 PDGIFDRLTSLQKIWLHTN 478
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 54/130 (41%), Gaps = 22/130 (16%)
Query: 476 KSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL--NIMIDVAS 533
K + H N++K + L LEY G L F R+ +I +
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPD 105
Query: 534 ALEYLHFGYSALV-------IHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQ 586
A + H + +V H D+KP N+LLD+ +SDF +A + ++ +
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 587 TLGTIGYMAP 596
GT+ Y+AP
Sbjct: 166 MXGTLPYVAP 175
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 54/130 (41%), Gaps = 22/130 (16%)
Query: 476 KSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL--NIMIDVAS 533
K + H N++K + L LEY G L F R+ +I +
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPD 105
Query: 534 ALEYLHFGYSALV-------IHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQ 586
A + H + +V H D+KP N+LLD+ +SDF +A + ++ +
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 587 TLGTIGYMAP 596
GT+ Y+AP
Sbjct: 166 MXGTLPYVAP 175
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 54/130 (41%), Gaps = 22/130 (16%)
Query: 476 KSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL--NIMIDVAS 533
K + H N++K + L LEY G L F R+ +I +
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPD 106
Query: 534 ALEYLHFGYSALV-------IHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQ 586
A + H + +V H D+KP N+LLD+ +SDF +A + ++ +
Sbjct: 107 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 587 TLGTIGYMAP 596
GT+ Y+AP
Sbjct: 167 MCGTLPYVAP 176
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 9/101 (8%)
Query: 497 ALVLEYMPHGSLEKYLYSSNCILD-IFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSN 555
++ +E+M GSL++ L + I + I +++I V L YL + ++H D+KPSN
Sbjct: 90 SICMEHMDGGSLDQVLKEAKRIPEEILGKVSIA--VLRGLAYLREKHQ--IMHRDVKPSN 145
Query: 556 VLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
+L++ L DF ++ L SM + +GT YMAP
Sbjct: 146 ILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMAP 182
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 54/130 (41%), Gaps = 22/130 (16%)
Query: 476 KSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL--NIMIDVAS 533
K + H N++K + L LEY G L F R+ +I +
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPD 105
Query: 534 ALEYLHFGYSALV-------IHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQ 586
A + H + +V H D+KP N+LLD+ +SDF +A + ++ +
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 587 TLGTIGYMAP 596
GT+ Y+AP
Sbjct: 166 MCGTLPYVAP 175
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 58/133 (43%), Gaps = 4/133 (3%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 522
+A K E +M S+ + ++ +++ C + L+ + MP G L Y+ +
Sbjct: 66 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ 124
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582
LN + +A + YL ++H DL NVL+ ++DF AKLL E++
Sbjct: 125 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEY 181
Query: 583 TQTQTLGTIGYMA 595
I +MA
Sbjct: 182 HAEGGKVPIKWMA 194
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 54/130 (41%), Gaps = 22/130 (16%)
Query: 476 KSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL--NIMIDVAS 533
K + H N++K + L LEY G L F R+ +I +
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPD 105
Query: 534 ALEYLHFGYSALV-------IHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQ 586
A + H + +V H D+KP N+LLD+ +SDF +A + ++ +
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 587 TLGTIGYMAP 596
GT+ Y+AP
Sbjct: 166 MCGTLPYVAP 175
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 54/130 (41%), Gaps = 22/130 (16%)
Query: 476 KSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL--NIMIDVAS 533
K + H N++K + L LEY G L F R+ +I +
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPD 105
Query: 534 ALEYLHFGYSALV-------IHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQ 586
A + H + +V H D+KP N+LLD+ +SDF +A + ++ +
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 587 TLGTIGYMAP 596
GT+ Y+AP
Sbjct: 166 MCGTLPYVAP 175
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 54/130 (41%), Gaps = 22/130 (16%)
Query: 476 KSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL--NIMIDVAS 533
K + H N++K + L LEY G L F R+ +I +
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPD 106
Query: 534 ALEYLHFGYSALV-------IHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQ 586
A + H + +V H D+KP N+LLD+ +SDF +A + ++ +
Sbjct: 107 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 587 TLGTIGYMAP 596
GT+ Y+AP
Sbjct: 167 MCGTLPYVAP 176
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 58/133 (43%), Gaps = 4/133 (3%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 522
+A K E +M S+ + ++ +++ C + L+ + MP G L Y+ +
Sbjct: 59 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ 117
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582
LN + +A + YL ++H DL NVL+ ++DF AKLL E++
Sbjct: 118 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEY 174
Query: 583 TQTQTLGTIGYMA 595
I +MA
Sbjct: 175 HAEGGKVPIKWMA 187
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/135 (20%), Positives = 59/135 (43%), Gaps = 12/135 (8%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILD---------I 521
E +MK ++++++ S + +V+E M HG L+ YL S + +
Sbjct: 69 EASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL 128
Query: 522 FQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQS 581
+ + + ++A + YL+ + +H DL N ++ + + DF + + + D
Sbjct: 129 QEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYY 185
Query: 582 MTQTQTLGTIGYMAP 596
+ L + +MAP
Sbjct: 186 RKGGKGLLPVRWMAP 200
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 54/130 (41%), Gaps = 22/130 (16%)
Query: 476 KSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL--NIMIDVAS 533
K + H N++K + L LEY G L F R+ +I +
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPD 105
Query: 534 ALEYLHFGYSALV-------IHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQ 586
A + H + +V H D+KP N+LLD+ +SDF +A + ++ +
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 587 TLGTIGYMAP 596
GT+ Y+AP
Sbjct: 166 MCGTLPYVAP 175
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 497 ALVLEYMPHGSLEKYLYSSNCILD-IFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSN 555
++ +E+M GSL++ L + I + I +++I V L YL + ++H D+KPSN
Sbjct: 83 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKHK--IMHRDVKPSN 138
Query: 556 VLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
+L++ L DF ++ L E + +GT YM+P
Sbjct: 139 ILVNSRGEIKLCDFGVSGQLIDE----MANEFVGTRSYMSP 175
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 66/136 (48%), Gaps = 13/136 (9%)
Query: 465 FKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQR 524
+ + VE E++ + H ++K++ + ++ +++E+ P G+++ + + L Q
Sbjct: 60 LEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQ- 118
Query: 525 LNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIA----KLLTGEDQ 580
I + LE L+F +S +IH DLK NVL+ L+DF ++ K L D
Sbjct: 119 --IQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRD- 175
Query: 581 SMTQTQTLGTIGYMAP 596
+GT +MAP
Sbjct: 176 -----SFIGTPYWMAP 186
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 62/130 (47%), Gaps = 18/130 (13%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++ +RH N I+ E LV+EY L S++ +L++ ++ ++
Sbjct: 65 EVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC--------LGSASDLLEVHKKPLQEVE 116
Query: 531 VAS----ALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQ 586
+A+ AL+ L + +S +IH D+K N+LL + + L DF A ++
Sbjct: 117 IAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA------PANX 170
Query: 587 TLGTIGYMAP 596
+GT +MAP
Sbjct: 171 FVGTPYWMAP 180
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 78/180 (43%), Gaps = 33/180 (18%)
Query: 444 TDEFSENNLIGRGGFALF-------------IRAFKSFDV---------ECEMMKSIRHR 481
+ +F +L+G G + + I+ + FD E +++K +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 482 NLIKVISSCSNEEFK----ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEY 537
N+I + + + F+ +++ + L + + + D Q + A++
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYF--IYQTLRAVKV 127
Query: 538 LHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLL--TGEDQSMTQTQTLGTIGYMA 595
LH + VIH DLKPSN+L++ N + DF +A+++ + D S Q G + ++A
Sbjct: 128 LH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVA 184
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 57/128 (44%), Gaps = 8/128 (6%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +M + H NLI++ + ++ LV+EY+ G L + + L + M
Sbjct: 136 EISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQ 195
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLL--DDNMVAHLSDFSIAKLLTGEDQSMTQTQTL 588
+ + ++H Y ++H DLKP N+L D + DF +A+ ++
Sbjct: 196 ICEGIRHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKV---NF 249
Query: 589 GTIGYMAP 596
GT ++AP
Sbjct: 250 GTPEFLAP 257
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 16/144 (11%)
Query: 458 FALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSNEEFKALVL-EYMPHGSLEKYL 512
F I A +++ E ++K ++H N+I ++ + S EEF + L ++ L +
Sbjct: 59 FQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 513 YSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIA 572
D Q L + + L+Y+H SA +IH DLKPSN+ ++++ + DF +A
Sbjct: 118 KXQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLA 172
Query: 573 KLLTGEDQSMTQTQTLGTIGYMAP 596
+ E T + T Y AP
Sbjct: 173 RHTDDE-----MTGYVATRWYRAP 191
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 64/138 (46%), Gaps = 20/138 (14%)
Query: 467 SFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL-----EKYLYSSNCILDI 521
S + E +++ I+H N++ + + LV++ + G L EK Y+ +
Sbjct: 66 SIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTL 125
Query: 522 FQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLL---DDNMVAHLSDFSIAKLLTGE 578
++ V A+ YLH ++H DLKP N+L D+ +SDF ++K+ E
Sbjct: 126 IRQ------VLDAVYYLH---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM---E 173
Query: 579 DQSMTQTQTLGTIGYMAP 596
+ + GT GY+AP
Sbjct: 174 GKGDVMSTACGTPGYVAP 191
>pdb|3RFJ|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 279
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 185 LTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDIC-RLAELYRLELGS 243
LTNL E+ L N+L KL L L L N L+ S+P + +L L RL+L +
Sbjct: 108 LTNLKELVLVENQLQSLPDGVFDKLTNLTYLYLYHNQLQ-SLPKGVFDKLTNLTRLDLDN 166
Query: 244 NKLYGSIPACFGNLASLRILSLGSNKLTSIP 274
N+L F L L+ LSL N+L S+P
Sbjct: 167 NQLQSLPEGVFDKLTQLKQLSLNDNQLKSVP 197
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 74/153 (48%), Gaps = 6/153 (3%)
Query: 118 YLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCNISGG 177
YL +L +S+L +LT + L+ N L LP L+ +L+E + +
Sbjct: 67 YLALGGNKLHDISALKELTNLTYLILTGNQLQS-LPNGVFDKLT-NLKELVLVENQLQS- 123
Query: 178 IPEEI-SNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDIC-RLAE 235
+P+ + LTNL + L N+L KL L RL+L++N L+ S+P+ + +L +
Sbjct: 124 LPDGVFDKLTNLTYLYLYHNQLQSLPKGVFDKLTNLTRLDLDNNQLQ-SLPEGVFDKLTQ 182
Query: 236 LYRLELGSNKLYGSIPACFGNLASLRILSLGSN 268
L +L L N+L F L SL + L +N
Sbjct: 183 LKQLSLNDNQLKSVPDGVFDRLTSLTHIWLLNN 215
Score = 35.8 bits (81), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 84/189 (44%), Gaps = 33/189 (17%)
Query: 163 SLEEFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNIL 222
S+++ N +I + I L N+ + LGGNKL+ L +L L L L N L
Sbjct: 42 SIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLHDIS--ALKELTNLTYLILTGNQL 97
Query: 223 EGSIPDDIC-RLAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSIPL-TFWNL 280
+ S+P+ + +L L L L N+L F L +L L L N+L S+P F L
Sbjct: 98 Q-SLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLYLYHNQLQSLPKGVFDKL 156
Query: 281 KDILQLNFSSNFLTGPLLLEIGNLKVLIGIDFSMNNFSGVIPREIGEKLSYLEDLNLSFN 340
++ +L+ +N L +P + +KL+ L+ L+L+ N
Sbjct: 157 TNLTRLDLDNNQLQS-------------------------LPEGVFDKLTQLKQLSLNDN 191
Query: 341 KLKGEIPRG 349
+LK +P G
Sbjct: 192 QLKS-VPDG 199
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/135 (20%), Positives = 59/135 (43%), Gaps = 12/135 (8%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILD---------I 521
E +MK ++++++ S + +V+E M HG L+ YL S + +
Sbjct: 70 EASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL 129
Query: 522 FQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQS 581
+ + + ++A + YL+ + +H DL N ++ + + DF + + + D
Sbjct: 130 QEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYY 186
Query: 582 MTQTQTLGTIGYMAP 596
+ L + +MAP
Sbjct: 187 RKGGKGLLPVRWMAP 201
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+SF MM + H++L+ C + LV E++ GSL+ YL + ++I +L
Sbjct: 57 ESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKL 116
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLL 558
+ +A+A +HF +IH ++ N+LL
Sbjct: 117 EVAKQLAAA---MHFLEENTLIHGNVCAKNILL 146
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 585
I + + ALE+LH S VIH D+KPSNVL++ + DF I+ L + + +
Sbjct: 113 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDD---VAKD 167
Query: 586 QTLGTIGYMAP 596
G YMAP
Sbjct: 168 IDAGCKPYMAP 178
>pdb|4FHO|A Chain A, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
pdb|4FHO|B Chain B, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
Length = 231
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 32/198 (16%)
Query: 83 SKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTSSTP----------ELSF---- 128
+ LS + G+ + G L NL L L +N +T TP ELS
Sbjct: 50 ATLSAFNTGVTTIEGI-----QYLNNLIGLELKDNQITDLTPLKNLTKITELELSGNPLK 104
Query: 129 -LSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCNISGGIPEEISNLTN 187
+S+++ +S+ +DL++ + + P +SN L+ Y+ I+ P ++ LTN
Sbjct: 105 NVSAIAGLQSIKTLDLTSTQITDVTPLAGLSN----LQVLYLDLNQITNISP--LAGLTN 158
Query: 188 LVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKLY 247
L + +G N++N P L L KL L +DN + P + L L + L N++
Sbjct: 159 LQYLSIGNNQVNDLTP--LANLSKLTTLRADDNKISDISP--LASLPNLIEVHLKDNQIS 214
Query: 248 GSIPACFGNLASLRILSL 265
P NL++L I++L
Sbjct: 215 DVSP--LANLSNLFIVTL 230
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 84/189 (44%), Gaps = 33/189 (17%)
Query: 163 SLEEFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNIL 222
S+++ N +I + I L N+ + LGGNKL+ L +L L L L N L
Sbjct: 42 SIDQIIANNSDIKS--VQGIQYLPNVRYLALGGNKLHDIS--ALKELTNLTYLILTGNQL 97
Query: 223 EGSIPDDIC-RLAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSIPL-TFWNL 280
+ S+P+ + +L L L L N+L F L +L L+L N+L S+P F L
Sbjct: 98 Q-SLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKL 156
Query: 281 KDILQLNFSSNFLTGPLLLEIGNLKVLIGIDFSMNNFSGVIPREIGEKLSYLEDLNLSFN 340
++ +L+ S N L +P + +KL+ L+DL L N
Sbjct: 157 TNLTELDLSYNQLQS-------------------------LPEGVFDKLTQLKDLRLYQN 191
Query: 341 KLKGEIPRG 349
+LK +P G
Sbjct: 192 QLKS-VPDG 199
Score = 35.4 bits (80), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 6/153 (3%)
Query: 118 YLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCNISGG 177
YL +L +S+L +LT + L+ N L LP L+ +L+E + +
Sbjct: 67 YLALGGNKLHDISALKELTNLTYLILTGNQLQS-LPNGVFDKLT-NLKELVLVENQLQS- 123
Query: 178 IPEEI-SNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDIC-RLAE 235
+P+ + LTNL ++L N+L KL L L+L N L+ S+P+ + +L +
Sbjct: 124 LPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQ-SLPEGVFDKLTQ 182
Query: 236 LYRLELGSNKLYGSIPACFGNLASLRILSLGSN 268
L L L N+L F L SL+ + L N
Sbjct: 183 LKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDN 215
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 62/126 (49%), Gaps = 20/126 (15%)
Query: 471 ECEMMKSIRHRNLIKVIS------SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQR 524
E ++M+ ++H N++ + + +E F LVLEY+P E +S + Q
Sbjct: 82 ELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVP----ETVYRASRHYAKLKQT 137
Query: 525 LNI------MIDVASALEYLHFGYSALVIHCDLKPSNVLLD-DNMVAHLSDFSIAKLLTG 577
+ + M + +L Y+H S + H D+KP N+LLD + V L DF AK+L
Sbjct: 138 MPMLLIKLYMYQLLRSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIA 194
Query: 578 EDQSMT 583
+ +++
Sbjct: 195 GEPNVS 200
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 16/144 (11%)
Query: 458 FALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSNEEFKALVL-EYMPHGSLEKYL 512
F I A +++ E ++K ++H N+I ++ + S EEF + L ++ L +
Sbjct: 88 FQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIV 146
Query: 513 YSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIA 572
D Q L + + L+Y+H SA +IH DLKPSN+ ++++ + DF +A
Sbjct: 147 KCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA 201
Query: 573 KLLTGEDQSMTQTQTLGTIGYMAP 596
+ E T + T Y AP
Sbjct: 202 RHTDDE-----MTGYVATRWYRAP 220
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 16/144 (11%)
Query: 458 FALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSNEEFKALVL-EYMPHGSLEKYL 512
F I A +++ E ++K ++H N+I ++ + S EEF + L ++ L +
Sbjct: 70 FQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 128
Query: 513 YSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIA 572
D Q L + + L+Y+H SA +IH DLKPSN+ ++++ + DF +A
Sbjct: 129 KCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLA 183
Query: 573 KLLTGEDQSMTQTQTLGTIGYMAP 596
+ E T + T Y AP
Sbjct: 184 RHTDDE-----MTGYVATRWYRAP 202
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 79/169 (46%), Gaps = 19/169 (11%)
Query: 436 SYLELCRATDEFSENNLIGRG---GFALFIRAFKSFDVECEMMKSIRHRNLIKVIS---- 488
+Y +C A D + + + + F I A +++ E ++K ++H N+I ++
Sbjct: 30 AYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTP 88
Query: 489 SCSNEEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVI 547
+ S EEF + L ++ L + + D Q L + + L+Y+H SA +I
Sbjct: 89 ARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFL--IYQILRGLKYIH---SADII 143
Query: 548 HCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
H DLKPSN+ ++++ + DF +A+ E T + T Y AP
Sbjct: 144 HRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAP 187
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 16/144 (11%)
Query: 458 FALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSNEEFKALVL-EYMPHGSLEKYL 512
F I A +++ E ++K ++H N+I ++ + S EEF + L ++ L +
Sbjct: 64 FQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 122
Query: 513 YSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIA 572
D Q L + + L+Y+H SA +IH DLKPSN+ ++++ + DF +A
Sbjct: 123 KCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLA 177
Query: 573 KLLTGEDQSMTQTQTLGTIGYMAP 596
+ E T + T Y AP
Sbjct: 178 RHTDDE-----MTGYVATRWYRAP 196
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 16/144 (11%)
Query: 458 FALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSNEEFKALVL-EYMPHGSLEKYL 512
F I A +++ E ++K ++H N+I ++ + S EEF + L ++ L +
Sbjct: 64 FQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 122
Query: 513 YSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIA 572
D Q L + + L+Y+H SA +IH DLKPSN+ ++++ + DF +A
Sbjct: 123 KCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLA 177
Query: 573 KLLTGEDQSMTQTQTLGTIGYMAP 596
+ E T + T Y AP
Sbjct: 178 RHTDDE-----MTGYVATRWYRAP 196
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 83/185 (44%), Gaps = 33/185 (17%)
Query: 438 LELCRATDEFSENNLIGRGGFA-LFIRAFKSF------------------DVECEMMK-- 476
L++ ++F + ++G+G F +F+ FK DVEC M++
Sbjct: 10 LQIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKR 69
Query: 477 ----SIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVA 532
+ H L + + +E V+EY+ G L ++ S + D+ + ++
Sbjct: 70 VLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK-FDLSRATFYAAEII 128
Query: 533 SALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKL-LTGEDQSMTQTQTLGTI 591
L++LH S +++ DLK N+LLD + ++DF + K + G+ ++ GT
Sbjct: 129 LGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT---NXFCGTP 182
Query: 592 GYMAP 596
Y+AP
Sbjct: 183 DYIAP 187
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 16/144 (11%)
Query: 458 FALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSNEEFKALVL-EYMPHGSLEKYL 512
F I A +++ E ++K ++H N+I ++ + S EEF + L ++ L +
Sbjct: 59 FQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 513 YSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIA 572
D Q L + + L+Y+H SA +IH DLKPSN+ ++++ + DF +A
Sbjct: 118 KCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Query: 573 KLLTGEDQSMTQTQTLGTIGYMAP 596
+ E T + T Y AP
Sbjct: 173 RHTDDE-----MTGXVATRWYRAP 191
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 62/126 (49%), Gaps = 7/126 (5%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +M+ H N++ + SS + +V+E++ G+L + ++ ++ Q + +
Sbjct: 92 EVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIV--THTRMNEEQIATVCLS 149
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
V AL YLH + VIH D+K ++LL + LSDF ++ E + +GT
Sbjct: 150 VLRALSYLH---NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKE--VPKRKXLVGT 204
Query: 591 IGYMAP 596
+MAP
Sbjct: 205 PYWMAP 210
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 62/128 (48%), Gaps = 13/128 (10%)
Query: 475 MKSIRHRNLIKVISSCS----NEEFKA-LVLEYMPHGSLEKYLYSSNCI-LDIFQRLNIM 528
+++ H N+++++ C+ + E K LV E++ L YL + L ++M
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLM 118
Query: 529 IDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTL 588
L++LH + ++H DLKP N+L+ L+DF +A++ + + M +
Sbjct: 119 RQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQ---MALAPVV 172
Query: 589 GTIGYMAP 596
T+ Y AP
Sbjct: 173 VTLWYRAP 180
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 19/169 (11%)
Query: 436 SYLELCRATDEFSENNLIGRG---GFALFIRAFKSFDVECEMMKSIRHRNLIKVIS---- 488
+Y +C A D + + + + F I A +++ E ++K ++H N+I ++
Sbjct: 53 AYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTP 111
Query: 489 SCSNEEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVI 547
+ S EEF + L ++ L + D Q L + + L+Y+H SA +I
Sbjct: 112 ARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADII 166
Query: 548 HCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
H DLKPSN+ ++++ + DF +A+ E T + T Y AP
Sbjct: 167 HRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAP 210
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 58/126 (46%), Gaps = 5/126 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++K + H N++K++ E LV E++ S++ + L I
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSY 111
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ L+ L F +S V+H DLKP N+L++ L+DF +A+ + T + T
Sbjct: 112 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVT 169
Query: 591 IGYMAP 596
+ Y AP
Sbjct: 170 LWYRAP 175
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 16/144 (11%)
Query: 458 FALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSNEEFKALVL-EYMPHGSLEKYL 512
F I A +++ E ++K ++H N+I ++ + S EEF + L ++ L +
Sbjct: 66 FQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 124
Query: 513 YSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIA 572
D Q L + + L+Y+H SA +IH DLKPSN+ ++++ + DF +A
Sbjct: 125 KCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA 179
Query: 573 KLLTGEDQSMTQTQTLGTIGYMAP 596
+ E T + T Y AP
Sbjct: 180 RHTADE-----MTGYVATRWYRAP 198
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 16/144 (11%)
Query: 458 FALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSNEEFKALVL-EYMPHGSLEKYL 512
F I A +++ E ++K ++H N+I ++ + S EEF + L ++ L +
Sbjct: 59 FQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 513 YSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIA 572
D Q L + + L+Y+H SA +IH DLKPSN+ ++++ + DF +A
Sbjct: 118 KXQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Query: 573 KLLTGEDQSMTQTQTLGTIGYMAP 596
+ E T + T Y AP
Sbjct: 173 RHTDDE-----MTGYVATRWYRAP 191
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 19/169 (11%)
Query: 436 SYLELCRATDEFSENNLIGRG---GFALFIRAFKSFDVECEMMKSIRHRNLIKVIS---- 488
+Y +C A D + + + + F I A +++ E ++K ++H N+I ++
Sbjct: 54 AYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTP 112
Query: 489 SCSNEEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVI 547
+ S EEF + L ++ L + D Q L + + L+Y+H SA +I
Sbjct: 113 ARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADII 167
Query: 548 HCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
H DLKPSN+ ++++ + DF +A+ E T + T Y AP
Sbjct: 168 HRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAP 211
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 16/144 (11%)
Query: 458 FALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSNEEFKALVL-EYMPHGSLEKYL 512
F I A +++ E ++K ++H N+I ++ + S EEF + L ++ L +
Sbjct: 66 FQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 124
Query: 513 YSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIA 572
D Q L + + L+Y+H SA +IH DLKPSN+ ++++ + DF +A
Sbjct: 125 KCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA 179
Query: 573 KLLTGEDQSMTQTQTLGTIGYMAP 596
+ E T + T Y AP
Sbjct: 180 RHTADE-----MTGYVATRWYRAP 198
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 58/126 (46%), Gaps = 5/126 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++K + H N++K++ E LV E++ S++ + L I
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSY 110
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
+ L+ L F +S V+H DLKP N+L++ L+DF +A+ + T + T
Sbjct: 111 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVT 168
Query: 591 IGYMAP 596
+ Y AP
Sbjct: 169 LWYRAP 174
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 16/144 (11%)
Query: 458 FALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSNEEFKALVL-EYMPHGSLEKYL 512
F I A +++ E ++K ++H N+I ++ + S EEF + L ++ L +
Sbjct: 78 FQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 136
Query: 513 YSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIA 572
D Q L + + L+Y+H SA +IH DLKPSN+ ++++ + DF +A
Sbjct: 137 KCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA 191
Query: 573 KLLTGEDQSMTQTQTLGTIGYMAP 596
+ E T + T Y AP
Sbjct: 192 RHTDDE-----MTGYVATRWYRAP 210
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 19/169 (11%)
Query: 436 SYLELCRATDEFSENNLIGRG---GFALFIRAFKSFDVECEMMKSIRHRNLIKVIS---- 488
+Y +C A D + + + + F I A +++ E ++K ++H N+I ++
Sbjct: 30 AYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTP 88
Query: 489 SCSNEEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVI 547
+ S EEF + L ++ L + D Q L + + L+Y+H SA +I
Sbjct: 89 ARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADII 143
Query: 548 HCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
H DLKPSN+ ++++ + DF +A+ E T + T Y AP
Sbjct: 144 HRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAP 187
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 16/144 (11%)
Query: 458 FALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSNEEFKALVL-EYMPHGSLEKYL 512
F I A +++ E ++K ++H N+I ++ + S EEF + L ++ L +
Sbjct: 57 FQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 115
Query: 513 YSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIA 572
D Q L + + L+Y+H SA +IH DLKPSN+ ++++ + DF +A
Sbjct: 116 KCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA 170
Query: 573 KLLTGEDQSMTQTQTLGTIGYMAP 596
+ E T + T Y AP
Sbjct: 171 RHTDDE-----MTGYVATRWYRAP 189
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 16/144 (11%)
Query: 458 FALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSNEEFKALVL-EYMPHGSLEKYL 512
F I A +++ E ++K ++H N+I ++ + S EEF + L ++ L +
Sbjct: 59 FQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 513 YSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIA 572
S D Q L + + L+Y+H SA +IH DLKPSN+ ++++ + DF +
Sbjct: 118 KSQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLC 172
Query: 573 KLLTGEDQSMTQTQTLGTIGYMAP 596
+ E T + T Y AP
Sbjct: 173 RHTDDE-----MTGYVATRWYRAP 191
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 65/131 (49%), Gaps = 10/131 (7%)
Query: 471 ECEMMKSIRHRNLI---KVISSCSNEEFKAL-VLEYMPHGSLEKYLYSSNCILDIFQRLN 526
E +++ RH N+I +I + + E+ K + +++ + L K L + + D
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICY 132
Query: 527 IMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE-DQSMTQT 585
+ + L+Y+H SA V+H DLKPSN+LL+ + DF +A++ + D +
Sbjct: 133 FLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLX 189
Query: 586 QTLGTIGYMAP 596
+ + T Y AP
Sbjct: 190 EXVATRWYRAP 200
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 16/144 (11%)
Query: 458 FALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSNEEFKALVL-EYMPHGSLEKYL 512
F I A +++ E ++K ++H N+I ++ + S EEF + L ++ L +
Sbjct: 82 FQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 140
Query: 513 YSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIA 572
D Q L + + L+Y+H SA +IH DLKPSN+ ++++ + DF +A
Sbjct: 141 KCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA 195
Query: 573 KLLTGEDQSMTQTQTLGTIGYMAP 596
+ E T + T Y AP
Sbjct: 196 RHTDDE-----MTGYVATRWYRAP 214
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 65/131 (49%), Gaps = 10/131 (7%)
Query: 471 ECEMMKSIRHRNLI---KVISSCSNEEFKAL-VLEYMPHGSLEKYLYSSNCILDIFQRLN 526
E +++ RH N+I +I + + E+ K + +++ + L K L + + D
Sbjct: 76 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICY 133
Query: 527 IMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE-DQSMTQT 585
+ + L+Y+H SA V+H DLKPSN+LL+ + DF +A++ + D +
Sbjct: 134 FLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLX 190
Query: 586 QTLGTIGYMAP 596
+ + T Y AP
Sbjct: 191 EXVATRWYRAP 201
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 16/144 (11%)
Query: 458 FALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSNEEFKALVL-EYMPHGSLEKYL 512
F I A +++ E ++K ++H N+I ++ + S EEF + L ++ L +
Sbjct: 71 FQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 129
Query: 513 YSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIA 572
D Q L + + L+Y+H SA +IH DLKPSN+ ++++ + DF +A
Sbjct: 130 KCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA 184
Query: 573 KLLTGEDQSMTQTQTLGTIGYMAP 596
+ E T + T Y AP
Sbjct: 185 RHTDDE-----MTGYVATRWYRAP 203
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 16/144 (11%)
Query: 458 FALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSNEEFKALVL-EYMPHGSLEKYL 512
F I A +++ E ++K ++H N+I ++ + S EEF + L ++ L +
Sbjct: 79 FQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 137
Query: 513 YSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIA 572
D Q L + + L+Y+H SA +IH DLKPSN+ ++++ + DF +A
Sbjct: 138 KCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA 192
Query: 573 KLLTGEDQSMTQTQTLGTIGYMAP 596
+ E T + T Y AP
Sbjct: 193 RHTDDE-----MTGYVATRWYRAP 211
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 16/144 (11%)
Query: 458 FALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSNEEFKALVL-EYMPHGSLEKYL 512
F I A +++ E ++K ++H N+I ++ + S EEF + L ++ L +
Sbjct: 66 FQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 124
Query: 513 YSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIA 572
D Q L + + L+Y+H SA +IH DLKPSN+ ++++ + DF +A
Sbjct: 125 KCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA 179
Query: 573 KLLTGEDQSMTQTQTLGTIGYMAP 596
+ E T + T Y AP
Sbjct: 180 RHTADE-----MTGYVATRWYRAP 198
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 16/144 (11%)
Query: 458 FALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSNEEFKALVL-EYMPHGSLEKYL 512
F I A +++ E ++K ++H N+I ++ + S EEF + L ++ L +
Sbjct: 71 FQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 129
Query: 513 YSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIA 572
D Q L + + L+Y+H SA +IH DLKPSN+ ++++ + DF +A
Sbjct: 130 KCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA 184
Query: 573 KLLTGEDQSMTQTQTLGTIGYMAP 596
+ E T + T Y AP
Sbjct: 185 RHTDDE-----MTGYVATRWYRAP 203
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 16/144 (11%)
Query: 458 FALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSNEEFKALVL-EYMPHGSLEKYL 512
F I A +++ E ++K ++H N+I ++ + S EEF + L ++ L +
Sbjct: 71 FQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 129
Query: 513 YSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIA 572
D Q L + + L+Y+H SA +IH DLKPSN+ ++++ + DF +A
Sbjct: 130 KCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA 184
Query: 573 KLLTGEDQSMTQTQTLGTIGYMAP 596
+ E T + T Y AP
Sbjct: 185 RHTDDE-----MTGYVATRWYRAP 203
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 548 HCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ-TQTLGTIGYMAP 596
H D+KP N+L+ + A+L DF IA T D+ +TQ T+GT+ Y AP
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATT--DEKLTQLGNTVGTLYYXAP 204
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 16/144 (11%)
Query: 458 FALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSNEEFKALVL-EYMPHGSLEKYL 512
F I A +++ E ++K ++H N+I ++ + S EEF + L ++ L +
Sbjct: 70 FQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 128
Query: 513 YSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIA 572
D Q L + + L+Y+H SA +IH DLKPSN+ ++++ + DF +A
Sbjct: 129 KCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA 183
Query: 573 KLLTGEDQSMTQTQTLGTIGYMAP 596
+ E T + T Y AP
Sbjct: 184 RHTDDE-----MTGYVATRWYRAP 202
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 16/144 (11%)
Query: 458 FALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSNEEFKALVL-EYMPHGSLEKYL 512
F I A +++ E ++K ++H N+I ++ + S EEF + L ++ L +
Sbjct: 59 FQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 513 YSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIA 572
D Q L + + L+Y+H SA +IH DLKPSN+ ++++ + DF +A
Sbjct: 118 KCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Query: 573 KLLTGEDQSMTQTQTLGTIGYMAP 596
+ E T + T Y AP
Sbjct: 173 RHTDDE-----MTGYVATRWYRAP 191
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 16/144 (11%)
Query: 458 FALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSNEEFKALVL-EYMPHGSLEKYL 512
F I A +++ E ++K ++H N+I ++ + S EEF + L ++ L +
Sbjct: 61 FQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 119
Query: 513 YSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIA 572
D Q L + + L+Y+H SA +IH DLKPSN+ ++++ + DF +A
Sbjct: 120 KCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA 174
Query: 573 KLLTGEDQSMTQTQTLGTIGYMAP 596
+ E T + T Y AP
Sbjct: 175 RHTDDE-----MTGYVATRWYRAP 193
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 16/144 (11%)
Query: 458 FALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSNEEFKALVL-EYMPHGSLEKYL 512
F I A +++ E ++K ++H N+I ++ + S EEF + L ++ L +
Sbjct: 61 FQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 119
Query: 513 YSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIA 572
D Q L + + L+Y+H SA +IH DLKPSN+ ++++ + DF +A
Sbjct: 120 KCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLA 174
Query: 573 KLLTGEDQSMTQTQTLGTIGYMAP 596
+ E T + T Y AP
Sbjct: 175 RHTDDE-----MTGYVATRWYRAP 193
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 16/144 (11%)
Query: 458 FALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSNEEFKALVL-EYMPHGSLEKYL 512
F I A +++ E ++K ++H N+I ++ + S EEF + L ++ L +
Sbjct: 55 FQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 113
Query: 513 YSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIA 572
D Q L + + L+Y+H SA +IH DLKPSN+ ++++ + DF +A
Sbjct: 114 KCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA 168
Query: 573 KLLTGEDQSMTQTQTLGTIGYMAP 596
+ E T + T Y AP
Sbjct: 169 RHTDDE-----MTGYVATRWYRAP 187
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 16/144 (11%)
Query: 458 FALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSNEEFKALVL-EYMPHGSLEKYL 512
F I A +++ E ++K ++H N+I ++ + S EEF + L ++ L +
Sbjct: 61 FQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 119
Query: 513 YSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIA 572
D Q L + + L+Y+H SA +IH DLKPSN+ ++++ + DF +A
Sbjct: 120 KCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA 174
Query: 573 KLLTGEDQSMTQTQTLGTIGYMAP 596
+ E T + T Y AP
Sbjct: 175 RHTDDE-----MTGYVATRWYRAP 193
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 16/144 (11%)
Query: 458 FALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSNEEFKALVL-EYMPHGSLEKYL 512
F I A +++ E ++K ++H N+I ++ + S EEF + L ++ L +
Sbjct: 59 FQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 513 YSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIA 572
D Q L + + L+Y+H SA +IH DLKPSN+ ++++ + DF +A
Sbjct: 118 KCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Query: 573 KLLTGEDQSMTQTQTLGTIGYMAP 596
+ E T + T Y AP
Sbjct: 173 RHTDDE-----MTGYVATRWYRAP 191
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 19/169 (11%)
Query: 436 SYLELCRATDEFSENNLIGRG---GFALFIRAFKSFDVECEMMKSIRHRNLIKVIS---- 488
+Y +C A D + + + + F I A +++ E ++K ++H N+I ++
Sbjct: 44 AYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTP 102
Query: 489 SCSNEEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVI 547
+ S EEF + L ++ L + D Q L + + L+Y+H SA +I
Sbjct: 103 ARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADII 157
Query: 548 HCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
H DLKPSN+ ++++ + DF +A+ E T + T Y AP
Sbjct: 158 HRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAP 201
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 16/144 (11%)
Query: 458 FALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSNEEFKALVL-EYMPHGSLEKYL 512
F I A +++ E ++K ++H N+I ++ + S EEF + L ++ L +
Sbjct: 56 FQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 114
Query: 513 YSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIA 572
D Q L + + L+Y+H SA +IH DLKPSN+ ++++ + DF +A
Sbjct: 115 KCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA 169
Query: 573 KLLTGEDQSMTQTQTLGTIGYMAP 596
+ E T + T Y AP
Sbjct: 170 RHTDDE-----MTGYVATRWYRAP 188
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 16/144 (11%)
Query: 458 FALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSNEEFKALVL-EYMPHGSLEKYL 512
F I A +++ E ++K ++H N+I ++ + S EEF + L ++ L +
Sbjct: 59 FQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 513 YSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIA 572
D Q L + + L+Y+H SA +IH DLKPSN+ ++++ + DF +A
Sbjct: 118 KCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Query: 573 KLLTGEDQSMTQTQTLGTIGYMAP 596
+ E T + T Y AP
Sbjct: 173 RHTDDE-----MTGYVATRWYRAP 191
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 16/144 (11%)
Query: 458 FALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSNEEFKALVL-EYMPHGSLEKYL 512
F I A +++ E ++K ++H N+I ++ + S EEF + L ++ L +
Sbjct: 59 FQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 513 YSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIA 572
D Q L + + L+Y+H SA +IH DLKPSN+ ++++ + DF +A
Sbjct: 118 KCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Query: 573 KLLTGEDQSMTQTQTLGTIGYMAP 596
+ E T + T Y AP
Sbjct: 173 RHTDDE-----MTGYVATRWYRAP 191
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 16/144 (11%)
Query: 458 FALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSNEEFKALVL-EYMPHGSLEKYL 512
F I A +++ E ++K ++H N+I ++ + S EEF + L ++ L +
Sbjct: 61 FQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 119
Query: 513 YSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIA 572
D Q L + + L+Y+H SA +IH DLKPSN+ ++++ + DF +A
Sbjct: 120 KCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA 174
Query: 573 KLLTGEDQSMTQTQTLGTIGYMAP 596
+ E T + T Y AP
Sbjct: 175 RHTDDE-----MTGYVATRWYRAP 193
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 16/144 (11%)
Query: 458 FALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSNEEFKALVL-EYMPHGSLEKYL 512
F I A +++ E ++K ++H N+I ++ + S EEF + L ++ L +
Sbjct: 64 FQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 122
Query: 513 YSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIA 572
D Q L + + L+Y+H SA +IH DLKPSN+ ++++ + DF +A
Sbjct: 123 KCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA 177
Query: 573 KLLTGEDQSMTQTQTLGTIGYMAP 596
+ E T + T Y AP
Sbjct: 178 RHTDDE-----MTGYVATRWYRAP 196
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 16/144 (11%)
Query: 458 FALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSNEEFKALVL-EYMPHGSLEKYL 512
F I A +++ E ++K ++H N+I ++ + S EEF + L ++ L +
Sbjct: 59 FQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 513 YSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIA 572
D Q L + + L+Y+H SA +IH DLKPSN+ ++++ + DF +A
Sbjct: 118 KCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Query: 573 KLLTGEDQSMTQTQTLGTIGYMAP 596
+ E T + T Y AP
Sbjct: 173 RHTDDE-----MTGYVATRWYRAP 191
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 16/144 (11%)
Query: 458 FALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSNEEFKALVL-EYMPHGSLEKYL 512
F I A +++ E ++K ++H N+I ++ + S EEF + L ++ L +
Sbjct: 58 FQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 116
Query: 513 YSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIA 572
D Q L + + L+Y+H SA +IH DLKPSN+ ++++ + DF +A
Sbjct: 117 KCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA 171
Query: 573 KLLTGEDQSMTQTQTLGTIGYMAP 596
+ E T + T Y AP
Sbjct: 172 RHTDDE-----MTGYVATRWYRAP 190
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 57/127 (44%), Gaps = 12/127 (9%)
Query: 479 RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI---------LDIFQRLNIMI 529
+H N++ ++ +C++ ++ EY +G L +L L++ L+
Sbjct: 100 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSS 159
Query: 530 DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLG 589
VA + +L S IH D+ NVLL + VA + DF +A+ + + + +
Sbjct: 160 QVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 216
Query: 590 TIGYMAP 596
+ +MAP
Sbjct: 217 PVKWMAP 223
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 16/144 (11%)
Query: 458 FALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSNEEFKALVL-EYMPHGSLEKYL 512
F I A +++ E ++K ++H N+I ++ + S EEF + L ++ L +
Sbjct: 56 FQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 114
Query: 513 YSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIA 572
D Q L + + L+Y+H SA +IH DLKPSN+ ++++ + DF +A
Sbjct: 115 KCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA 169
Query: 573 KLLTGEDQSMTQTQTLGTIGYMAP 596
+ E T + T Y AP
Sbjct: 170 RHTDDE-----MTGYVATRWYRAP 188
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 16/144 (11%)
Query: 458 FALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSNEEFKALVL-EYMPHGSLEKYL 512
F I A +++ E ++K ++H N+I ++ + S EEF + L ++ L +
Sbjct: 65 FQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 123
Query: 513 YSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIA 572
D Q L + + L+Y+H SA +IH DLKPSN+ ++++ + DF +A
Sbjct: 124 KCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLA 178
Query: 573 KLLTGEDQSMTQTQTLGTIGYMAP 596
+ E T + T Y AP
Sbjct: 179 RHTDDE-----MTGYVATRWYRAP 197
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 62/128 (48%), Gaps = 13/128 (10%)
Query: 475 MKSIRHRNLIKVISSCS----NEEFKA-LVLEYMPHGSLEKYLYSSNCI-LDIFQRLNIM 528
+++ H N+++++ C+ + E K LV E++ L YL + L ++M
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLM 118
Query: 529 IDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTL 588
L++LH + ++H DLKP N+L+ L+DF +A++ + + M +
Sbjct: 119 RQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQ---MALDPVV 172
Query: 589 GTIGYMAP 596
T+ Y AP
Sbjct: 173 VTLWYRAP 180
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 19/169 (11%)
Query: 436 SYLELCRATDEFSENNLIGRG---GFALFIRAFKSFDVECEMMKSIRHRNLIKVIS---- 488
+Y +C A D + + + + F I A +++ E ++K ++H N+I ++
Sbjct: 34 AYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTP 92
Query: 489 SCSNEEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVI 547
+ S EEF + L ++ L + D Q L + + L+Y+H SA +I
Sbjct: 93 ARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADII 147
Query: 548 HCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
H DLKPSN+ ++++ + DF +A+ E T + T Y AP
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAP 191
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 16/144 (11%)
Query: 458 FALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSNEEFKALVL-EYMPHGSLEKYL 512
F I A +++ E ++K ++H N+I ++ + S EEF + L ++ L +
Sbjct: 65 FQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 123
Query: 513 YSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIA 572
D Q L + + L+Y+H SA +IH DLKPSN+ ++++ + DF +A
Sbjct: 124 KCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA 178
Query: 573 KLLTGEDQSMTQTQTLGTIGYMAP 596
+ E T + T Y AP
Sbjct: 179 RHTDDE-----MTGYVATRWYRAP 197
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 16/144 (11%)
Query: 458 FALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSNEEFKALVL-EYMPHGSLEKYL 512
F I A +++ E ++K ++H N+I ++ + S EEF + L ++ L +
Sbjct: 59 FQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 513 YSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIA 572
D Q L + + L+Y+H SA +IH DLKPSN+ ++++ + DF +A
Sbjct: 118 KCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Query: 573 KLLTGEDQSMTQTQTLGTIGYMAP 596
+ E T + T Y AP
Sbjct: 173 RHTDDE-----MTGYVATRWYRAP 191
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 16/144 (11%)
Query: 458 FALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSNEEFKALVL-EYMPHGSLEKYL 512
F I A +++ E ++K ++H N+I ++ + S EEF + L ++ L +
Sbjct: 59 FQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 513 YSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIA 572
D Q L + + L+Y+H SA +IH DLKPSN+ ++++ + DF +A
Sbjct: 118 KCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Query: 573 KLLTGEDQSMTQTQTLGTIGYMAP 596
+ E T + T Y AP
Sbjct: 173 RHTDDE-----MTGYVATRWYRAP 191
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 16/144 (11%)
Query: 458 FALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSNEEFKALVL-EYMPHGSLEKYL 512
F I A +++ E ++K ++H N+I ++ + S EEF + L ++ L +
Sbjct: 66 FQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 124
Query: 513 YSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIA 572
D Q L + + L+Y+H SA +IH DLKPSN+ ++++ + DF +A
Sbjct: 125 KCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA 179
Query: 573 KLLTGEDQSMTQTQTLGTIGYMAP 596
+ E T + T Y AP
Sbjct: 180 RHTDDE-----MTGYVATRWYRAP 198
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 77/180 (42%), Gaps = 9/180 (5%)
Query: 172 CNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDIC 231
C GG+ S N +D KL +IP + K +L+L+ N L
Sbjct: 5 CKKDGGV---CSCNNNKNSVDCSSKKLT-AIPSNIPADTK--KLDLQSNKLSSLPSKAFH 58
Query: 232 RLAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSIPL-TFWNLKDILQLNFSS 290
RL +L L L NKL F L +L L + NKL ++P+ F L ++ +L
Sbjct: 59 RLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDR 118
Query: 291 NFLTGPLLLEIGNLKVLIGIDFSMNNFSGVIPREIGEKLSYLEDLNLSFNKLKGEIPRGG 350
N L +L L + N +P+ + +KL+ L++L L N+LK +P G
Sbjct: 119 NQLKSLPPRVFDSLTKLTYLSLGYNELQS-LPKGVFDKLTSLKELRLYNNQLK-RVPEGA 176
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 74/166 (44%), Gaps = 9/166 (5%)
Query: 110 EQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEEFYM 169
++L L N L SS P +F L L+ L++N L LP L ++LE ++
Sbjct: 40 KKLDLQSNKL-SSLPSKAF----HRLTKLRLLYLNDNKLQ-TLPAGIFKEL-KNLETLWV 92
Query: 170 YNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDD 229
+ + L NL E+ L N+L P L KL L+L N L+ S+P
Sbjct: 93 TDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ-SLPKG 151
Query: 230 IC-RLAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSIP 274
+ +L L L L +N+L F L L+ L L +N+L +P
Sbjct: 152 VFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVP 197
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 78/178 (43%), Gaps = 11/178 (6%)
Query: 177 GIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICR-LAE 235
IP I T ++DL NKL+ +L KL+ L L DN L+ ++P I + L
Sbjct: 30 AIPSNIPADTK--KLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKN 86
Query: 236 LYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSIP-LTFWNLKDILQLNFSSNFLT 294
L L + NKL F L +L L L N+L S+P F +L + L+ N L
Sbjct: 87 LETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ 146
Query: 295 GPLLLEIGNLKVLIGID--FSMNNFSGVIPREIGEKLSYLEDLNLSFNKLKGEIPRGG 350
L G L + NN +P +KL+ L+ L L N+LK +P G
Sbjct: 147 S---LPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLK-RVPEGA 200
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 58/129 (44%), Gaps = 17/129 (13%)
Query: 57 RLPNLEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDE 116
+L NL +L L N PR + +KL+ LSLG N F L +L++L L
Sbjct: 107 QLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYN 166
Query: 117 NYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEEFYM------- 169
N L PE +F L+ K+L L NN L + P+ + SLE+ M
Sbjct: 167 NQL-KRVPEGAF-DKLTELKTLK---LDNNQLKRV-PEGAFD----SLEKLKMLQLQENP 216
Query: 170 YNCNISGGI 178
++C +G I
Sbjct: 217 WDCTCNGII 225
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 52/126 (41%), Gaps = 22/126 (17%)
Query: 480 HRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL--NIMIDVASALEY 537
H N++K + L LEY G L F R+ +I + A +
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQRF 110
Query: 538 LHFGYSALV-------IHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
H + +V H D+KP N+LLD+ +SDF +A + ++ + GT
Sbjct: 111 FHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 591 IGYMAP 596
+ Y+AP
Sbjct: 171 LPYVAP 176
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 16/144 (11%)
Query: 458 FALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSNEEFKALVL-EYMPHGSLEKYL 512
F I A +++ E ++K ++H N+I ++ + S EEF + L ++ L +
Sbjct: 59 FQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 513 YSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIA 572
D Q L + + L+Y+H SA +IH DLKPSN+ ++++ + DF +A
Sbjct: 118 KCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Query: 573 KLLTGEDQSMTQTQTLGTIGYMAP 596
+ E T + T Y AP
Sbjct: 173 RHTDDE-----MTGYVATRWYRAP 191
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 16/144 (11%)
Query: 458 FALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSNEEFKALVL-EYMPHGSLEKYL 512
F I A +++ E ++K ++H N+I ++ + S EEF + L ++ L +
Sbjct: 64 FQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 122
Query: 513 YSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIA 572
D Q L + + L+Y+H SA +IH DLKPSN+ ++++ + DF +A
Sbjct: 123 KCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA 177
Query: 573 KLLTGEDQSMTQTQTLGTIGYMAP 596
+ E T + T Y AP
Sbjct: 178 RHTDDE-----MTGYVATRWYRAP 196
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 9/101 (8%)
Query: 497 ALVLEYMPHGSLEKYLYSSNCILD-IFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSN 555
++ +E+M GSL++ L + I + I +++I V L YL + ++H D+KPSN
Sbjct: 107 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKHK--IMHRDVKPSN 162
Query: 556 VLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
+L++ L DF ++ L SM + +GT YM+P
Sbjct: 163 ILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMSP 199
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 57/127 (44%), Gaps = 12/127 (9%)
Query: 479 RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI---------LDIFQRLNIMI 529
+H N++ ++ +C++ ++ EY +G L +L L++ L+
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSS 167
Query: 530 DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLG 589
VA + +L S IH D+ NVLL + VA + DF +A+ + + + +
Sbjct: 168 QVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 224
Query: 590 TIGYMAP 596
+ +MAP
Sbjct: 225 PVKWMAP 231
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 9/101 (8%)
Query: 497 ALVLEYMPHGSLEKYLYSSNCILD-IFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSN 555
++ +E+M GSL++ L + I + I +++I V L YL + ++H D+KPSN
Sbjct: 142 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKHK--IMHRDVKPSN 197
Query: 556 VLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
+L++ L DF ++ L SM + +GT YM+P
Sbjct: 198 ILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMSP 234
>pdb|3A79|B Chain B, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
Length = 562
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 5/114 (4%)
Query: 183 SNLTNLVEIDLGGNKLNGSIPITL--GKLRKLQRLNLEDNILEGSIPDDICRLAE-LYRL 239
S L L + L N L + L + L+ L++ N L D C AE + L
Sbjct: 374 STLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVL 433
Query: 240 ELGSNKLYGSIPACFGNLASLRILSLGSNKLTSIPLTFWNLKDILQLNFSSNFL 293
L SN L GS+ C +++L L +N++ SIP +L+ + +LN +SN L
Sbjct: 434 NLSSNMLTGSVFRCLP--PKVKVLDLHNNRIMSIPKDVTHLQALQELNVASNQL 485
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
Query: 184 NLTNLVEIDLGGNKLNG-SIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELG 242
N+++L +D+ N LN + T + LNL N+L GS+ C ++ L+L
Sbjct: 401 NMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFR--CLPPKVKVLDLH 458
Query: 243 SNKLYGSIPACFGNLASLRILSLGSNKLTSIP 274
+N++ SIP +L +L+ L++ SN+L S+P
Sbjct: 459 NNRIM-SIPKDVTHLQALQELNVASNQLKSVP 489
Score = 36.2 bits (82), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 65/140 (46%), Gaps = 11/140 (7%)
Query: 215 LNLEDNILEGSIPDDICRLAELYRLELGSNKL--YGSIPACFGNLASLRILSLGSNKLTS 272
LN N+ S+ L L L L N L + + N++SL L + N L S
Sbjct: 358 LNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNS 417
Query: 273 IPL--TFWNLKDILQLNFSSNFLTGPLLLEI-GNLKVLIGIDFSMNNFSGVIPREIGEKL 329
T + IL LN SSN LTG + + +KVL D NN IP+++ L
Sbjct: 418 HAYDRTCAWAESILVLNLSSNMLTGSVFRCLPPKVKVL---DLH-NNRIMSIPKDVTH-L 472
Query: 330 SYLEDLNLSFNKLKGEIPRG 349
L++LN++ N+LK +P G
Sbjct: 473 QALQELNVASNQLKS-VPDG 491
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 191 IDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKLYGSI 250
++L N L GS+ L K++ L+L +N + SIP D+ L L L + SN+L
Sbjct: 433 LNLSSNMLTGSVFRCLPP--KVKVLDLHNNRI-MSIPKDVTHLQALQELNVASNQLKSVP 489
Query: 251 PACFGNLASLRILSLGSN 268
F L SL+ + L N
Sbjct: 490 DGVFDRLTSLQYIWLHDN 507
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 72/166 (43%), Gaps = 21/166 (12%)
Query: 69 NNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTF--GNLRNLEQLGLDENYLTSSTPEL 126
N F+ ++ + +L L L N F N+ +LE L + N L S
Sbjct: 363 NVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSH---- 418
Query: 127 SFLSSLSNCKSLTLIDLSNNPLDGIL-----PKTSISNLSRSLEEFYMYNCNISGGIPEE 181
++ + + +S+ +++LS+N L G + PK + +L N IP++
Sbjct: 419 AYDRTCAWAESILVLNLSSNMLTGSVFRCLPPKVKVLDLHN----------NRIMSIPKD 468
Query: 182 ISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIP 227
+++L L E+++ N+L +L LQ + L DN + + P
Sbjct: 469 VTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 514
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 4/107 (3%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +++++ L+K+ S + +V+EY+ G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTG 577
+ EYLH S +I+ DLKP N+L+D ++DF AK + G
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 71/135 (52%), Gaps = 13/135 (9%)
Query: 471 ECEMMKSIR-HRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 529
E EM+ + HRN++++I E+ LV E M GS+ +++ ++ + ++
Sbjct: 60 EVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV-VVQ 118
Query: 530 DVASALEYLHFGYSALVIHCDLKPSNVLLDD-NMVA--HLSDFSIAK--LLTGEDQSMTQ 584
DVASAL++LH + + H DLKP N+L + N V+ + DF + L G+ ++
Sbjct: 119 DVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPIST 175
Query: 585 TQTL---GTIGYMAP 596
+ L G+ YMAP
Sbjct: 176 PELLTPCGSAEYMAP 190
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 9/101 (8%)
Query: 497 ALVLEYMPHGSLEKYLYSSNCILD-IFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSN 555
++ +E+M GSL++ L + I + I +++I V L YL + ++H D+KPSN
Sbjct: 99 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKHK--IMHRDVKPSN 154
Query: 556 VLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
+L++ L DF ++ L SM + +GT YM+P
Sbjct: 155 ILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMSP 191
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 9/74 (12%)
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDD---NMVAHLSDFSIAKLLTGE--DQ 580
IM + A++YLH S + H D+KP N+L N + L+DF AK TGE D+
Sbjct: 121 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTGEKYDK 177
Query: 581 SMTQTQTLGTIGYM 594
S +LG I Y+
Sbjct: 178 S-CDMWSLGVIMYI 190
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 71/135 (52%), Gaps = 13/135 (9%)
Query: 471 ECEMMKSIR-HRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 529
E EM+ + HRN++++I E+ LV E M GS+ +++ ++ + ++
Sbjct: 60 EVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV-VVQ 118
Query: 530 DVASALEYLHFGYSALVIHCDLKPSNVLLDD-NMVA--HLSDFSIAK--LLTGEDQSMTQ 584
DVASAL++LH + + H DLKP N+L + N V+ + DF + L G+ ++
Sbjct: 119 DVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPIST 175
Query: 585 TQTL---GTIGYMAP 596
+ L G+ YMAP
Sbjct: 176 PELLTPCGSAEYMAP 190
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 58/134 (43%), Gaps = 12/134 (8%)
Query: 469 DVECEMMK------SIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 522
DVEC M + + H L ++ + V+E++ G L ++ S +
Sbjct: 66 DVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEAR 125
Query: 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582
R ++ SAL +LH +I+ DLK NVLLD L+DF + K G +
Sbjct: 126 ARF-YAAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCK--EGICNGV 179
Query: 583 TQTQTLGTIGYMAP 596
T GT Y+AP
Sbjct: 180 TTATFCGTPDYIAP 193
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 20/139 (14%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL-----EKYLYSSNCILD 520
K E ++ + H N+IK+ +LVLE + G L EK YS D
Sbjct: 93 KIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAAD 152
Query: 521 IFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDD---NMVAHLSDFSIAKLLTG 577
++ + A+ YLH ++H DLKP N+L + ++DF ++K++
Sbjct: 153 AVKQ------ILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV-- 201
Query: 578 EDQSMTQTQTLGTIGYMAP 596
E Q + +T GT GY AP
Sbjct: 202 EHQVLMKT-VCGTPGYCAP 219
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 19/169 (11%)
Query: 436 SYLELCRATDEFSENNLIGRG---GFALFIRAFKSFDVECEMMKSIRHRNLIKVIS---- 488
+Y +C A D + + + + F I A +++ E ++K ++H N+I ++
Sbjct: 34 AYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTP 92
Query: 489 SCSNEEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVI 547
+ S EEF + L ++ L + D Q L + + L+Y+H SA +I
Sbjct: 93 ARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADII 147
Query: 548 HCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
H DLKPSN+ ++++ + DF +A+ E T + T Y AP
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFYLARHTDDE-----MTGYVATRWYRAP 191
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 5/127 (3%)
Query: 470 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 529
E ++++ RH L + S + V+EY G L +L + R
Sbjct: 200 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGA 258
Query: 530 DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLG 589
++ SAL+YLH V++ DLK N++LD + ++DF + K G T G
Sbjct: 259 EIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCG 314
Query: 590 TIGYMAP 596
T Y+AP
Sbjct: 315 TPEYLAP 321
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 16/144 (11%)
Query: 458 FALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSNEEFKALVL-EYMPHGSLEKYL 512
F I A +++ E ++K ++H N+I ++ + S EEF + L ++ L +
Sbjct: 65 FQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 123
Query: 513 YSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIA 572
D Q L + + L+Y+H SA +IH DLKPSN+ ++++ + DF +A
Sbjct: 124 KCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA 178
Query: 573 KLLTGEDQSMTQTQTLGTIGYMAP 596
+ E T + T Y AP
Sbjct: 179 RHTDDE-----MTGYVATRWYRAP 197
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 5/127 (3%)
Query: 470 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 529
E ++++ RH L + S + V+EY G L +L + R
Sbjct: 197 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGA 255
Query: 530 DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLG 589
++ SAL+YLH V++ DLK N++LD + ++DF + K G T G
Sbjct: 256 EIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCG 311
Query: 590 TIGYMAP 596
T Y+AP
Sbjct: 312 TPEYLAP 318
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 62/128 (48%), Gaps = 13/128 (10%)
Query: 475 MKSIRHRNLIKVISSCS----NEEFKA-LVLEYMPHGSLEKYLYSSNCI-LDIFQRLNIM 528
+++ H N+++++ C+ + E K LV E++ L YL + L ++M
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLM 118
Query: 529 IDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTL 588
L++LH + ++H DLKP N+L+ L+DF +A++ + + M +
Sbjct: 119 RQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQ---MALFPVV 172
Query: 589 GTIGYMAP 596
T+ Y AP
Sbjct: 173 VTLWYRAP 180
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 19/169 (11%)
Query: 436 SYLELCRATDEFSENNLIGRG---GFALFIRAFKSFDVECEMMKSIRHRNLIKVIS---- 488
+Y +C A D + + + + F I A +++ E ++K ++H N+I ++
Sbjct: 40 AYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTP 98
Query: 489 SCSNEEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVI 547
+ S EEF + L ++ L + D Q L + + L+Y+H SA +I
Sbjct: 99 ARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADII 153
Query: 548 HCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
H DLKPSN+ ++++ + DF +A+ E T + T Y AP
Sbjct: 154 HRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAP 197
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+SF MM + H++L+ C + LV E++ GSL+ YL + ++I +L
Sbjct: 57 ESFFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKL 116
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLL 558
+ +A A +HF +IH ++ N+LL
Sbjct: 117 EVAKQLAWA---MHFLEENTLIHGNVCAKNILL 146
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 5/127 (3%)
Query: 470 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 529
E ++++ RH L + S + V+EY G L +L + R
Sbjct: 57 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGA 115
Query: 530 DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLG 589
++ SAL+YLH V++ DLK N++LD + ++DF + K G T G
Sbjct: 116 EIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCG 171
Query: 590 TIGYMAP 596
T Y+AP
Sbjct: 172 TPEYLAP 178
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 9/101 (8%)
Query: 497 ALVLEYMPHGSLEKYLYSSNCILD-IFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSN 555
++ +E+M GSL++ L + I + I +++I V L YL + ++H D+KPSN
Sbjct: 80 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKHK--IMHRDVKPSN 135
Query: 556 VLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
+L++ L DF ++ L SM + +GT YM+P
Sbjct: 136 ILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMSP 172
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 63/159 (39%), Gaps = 8/159 (5%)
Query: 440 LCRATDEFSENNLIGRGGFALFIRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALV 499
+ R T+ + NN + ++ E + M +RH L+ + + ++ ++
Sbjct: 173 VHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMI 232
Query: 500 LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLD 559
E+M G L + + + + + + M V L ++H +H DLKP N++
Sbjct: 233 YEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFT 289
Query: 560 DNMVAHLS--DFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
L DF + L D + T GT + AP
Sbjct: 290 TKRSNELKLIDFGLTAHL---DPKQSVKVTTGTAEFAAP 325
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 9/101 (8%)
Query: 497 ALVLEYMPHGSLEKYLYSSNCILD-IFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSN 555
++ +E+M GSL++ L + I + I +++I V L YL + ++H D+KPSN
Sbjct: 80 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKHK--IMHRDVKPSN 135
Query: 556 VLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
+L++ L DF ++ L SM + +GT YM+P
Sbjct: 136 ILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMSP 172
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 9/101 (8%)
Query: 497 ALVLEYMPHGSLEKYLYSSNCILD-IFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSN 555
++ +E+M GSL++ L + I + I +++I V L YL + ++H D+KPSN
Sbjct: 80 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKHK--IMHRDVKPSN 135
Query: 556 VLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
+L++ L DF ++ L SM + +GT YM+P
Sbjct: 136 ILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMSP 172
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 5/127 (3%)
Query: 470 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 529
E ++++ RH L + S + V+EY G L +L + R
Sbjct: 59 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGA 117
Query: 530 DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLG 589
++ SAL+YLH V++ DLK N++LD + ++DF + K G T G
Sbjct: 118 EIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCG 173
Query: 590 TIGYMAP 596
T Y+AP
Sbjct: 174 TPEYLAP 180
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 10/129 (7%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +++K + H N++K+ ++ + LV E G L + S ++ I+
Sbjct: 82 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQ 140
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLD---DNMVAHLSDFSIAKLLTGEDQSMTQTQT 587
V S + Y+H ++H DLKP N+LL+ + + DF ++ T + S
Sbjct: 141 VLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS---THFEASKKMKDK 194
Query: 588 LGTIGYMAP 596
+GT Y+AP
Sbjct: 195 IGTAYYIAP 203
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 9/101 (8%)
Query: 497 ALVLEYMPHGSLEKYLYSSNCILD-IFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSN 555
++ +E+M GSL++ L + I + I +++I V L YL + ++H D+KPSN
Sbjct: 80 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKHK--IMHRDVKPSN 135
Query: 556 VLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
+L++ L DF ++ L SM + +GT YM+P
Sbjct: 136 ILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMSP 172
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 5/127 (3%)
Query: 470 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 529
E ++++ RH L + S + V+EY G L +L + R
Sbjct: 58 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGA 116
Query: 530 DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLG 589
++ SAL+YLH V++ DLK N++LD + ++DF + K G T G
Sbjct: 117 EIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCG 172
Query: 590 TIGYMAP 596
T Y+AP
Sbjct: 173 TPEYLAP 179
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 62/140 (44%), Gaps = 13/140 (9%)
Query: 463 RAFKSFDVECE--MMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILD 520
R D+E E ++K I+H N+I + N+ L+LE + G L +L + +
Sbjct: 54 RGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE 113
Query: 521 IFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVA----HLSDFSIAKLLT 576
+ + + + + YLH S + H DLKP N++L D V + DF +A +
Sbjct: 114 E-EATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI- 168
Query: 577 GEDQSMTQTQTLGTIGYMAP 596
D GT ++AP
Sbjct: 169 --DFGNEFKNIFGTPEFVAP 186
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 9/101 (8%)
Query: 497 ALVLEYMPHGSLEKYLYSSNCILD-IFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSN 555
++ +E+M GSL++ L + I + I +++I V L YL + ++H D+KPSN
Sbjct: 80 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKHK--IMHRDVKPSN 135
Query: 556 VLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
+L++ L DF ++ L SM + +GT YM+P
Sbjct: 136 ILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMSP 172
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/135 (19%), Positives = 59/135 (43%), Gaps = 12/135 (8%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILD---------I 521
E +MK ++++++ S + +V+E M HG L+ YL S + +
Sbjct: 71 EASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL 130
Query: 522 FQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQS 581
+ + + ++A + YL+ + +H +L N ++ + + DF + + + D
Sbjct: 131 QEMIQMAAEIADGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYY 187
Query: 582 MTQTQTLGTIGYMAP 596
+ L + +MAP
Sbjct: 188 RKGGKGLLPVRWMAP 202
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 63/159 (39%), Gaps = 8/159 (5%)
Query: 440 LCRATDEFSENNLIGRGGFALFIRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALV 499
+ R T+ + NN + ++ E + M +RH L+ + + ++ ++
Sbjct: 67 VHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMI 126
Query: 500 LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLD 559
E+M G L + + + + + + M V L ++H +H DLKP N++
Sbjct: 127 YEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFT 183
Query: 560 DNMVAHLS--DFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
L DF + L D + T GT + AP
Sbjct: 184 TKRSNELKLIDFGLTAHL---DPKQSVKVTTGTAEFAAP 219
>pdb|4ECO|A Chain A, Crystal Structure Of A Hypothetical Protein (Bacegg_03329)
From Bacteroides Eggerthii Dsm 20697 At 2.70 A
Resolution
pdb|4ECO|B Chain B, Crystal Structure Of A Hypothetical Protein (Bacegg_03329)
From Bacteroides Eggerthii Dsm 20697 At 2.70 A
Resolution
Length = 636
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 232 RLAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSIPLTFWNLKDILQ-LNFSS 290
+ +L LE N+L G +PA FG+ L L+L N++T IP F + ++ L+F+
Sbjct: 328 KXKKLGXLECLYNQLEGKLPA-FGSEIKLASLNLAYNQITEIPANFCGFTEQVENLSFAH 386
Query: 291 NFLTG-PLLLEIGNLKVLIGIDFSMNNFSGV 320
N L P + + ++ V IDFS N V
Sbjct: 387 NKLKYIPNIFDAKSVSVXSAIDFSYNEIGSV 417
>pdb|4ARN|A Chain A, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARN|B Chain B, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARN|C Chain C, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARN|D Chain D, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARR|A Chain A, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor With The Magic Triangle I3c
pdb|4ARR|B Chain B, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor With The Magic Triangle I3c
Length = 279
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 206 LGKLRKLQRLNLEDNILE--GSIPDDICRLAELYRLELGSNKLYGSIPACFGNLASLRIL 263
L +R L L L NI E + DD L L +E GSNKL FG + L+ L
Sbjct: 143 LTDMRNLSHLELRANIEEMPSHLFDD---LENLESIEFGSNKLRQMPRGIFGKMPKLKQL 199
Query: 264 SLGSNKLTSIP 274
+L SN+L S+P
Sbjct: 200 NLASNQLKSVP 210
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 184 NLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDIC-RLAELYRLELG 242
+L NL I+ G NKL GK+ KL++LNL N L+ S+PD I RL L ++ L
Sbjct: 168 DLENLESIEFGSNKLRQMPRGIFGKMPKLKQLNLASNQLK-SVPDGIFDRLTSLQKIWLH 226
Query: 243 SNKLYGSIP 251
+N S P
Sbjct: 227 TNPWDCSCP 235
Score = 32.3 bits (72), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Query: 257 LASLRILSLGSNKLTSIPLTFW-NLKDILQLNFSSNFLTGPLLLEIGNLKVLIGIDFSMN 315
L L+ + +LT IP +++++ L +N P L +L+ L I+F N
Sbjct: 122 LHGLKRFRFTTRRLTHIPANLLTDMRNLSHLELRANIEEMPSHL-FDDLENLESIEFGSN 180
Query: 316 NFSGVIPREIGEKLSYLEDLNLSFNKLKGEIPRG 349
+PR I K+ L+ LNL+ N+LK +P G
Sbjct: 181 KLRQ-MPRGIFGKMPKLKQLNLASNQLKS-VPDG 212
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/135 (19%), Positives = 59/135 (43%), Gaps = 12/135 (8%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILD---------I 521
E +MK ++++++ S + +V+E M HG L+ YL S + +
Sbjct: 70 EASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL 129
Query: 522 FQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQS 581
+ + + ++A + YL+ + +H +L N ++ + + DF + + + D
Sbjct: 130 QEMIQMAAEIADGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYY 186
Query: 582 MTQTQTLGTIGYMAP 596
+ L + +MAP
Sbjct: 187 RKGGKGLLPVRWMAP 201
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 16/144 (11%)
Query: 458 FALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSNEEFKALVL-EYMPHGSLEKYL 512
F I A +++ E ++K ++H N+I ++ + S EEF + L ++ L +
Sbjct: 59 FQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 513 YSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIA 572
D Q L + + L+Y+H SA +IH DLKPSN+ ++++ + D+ +A
Sbjct: 118 KCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDYGLA 172
Query: 573 KLLTGEDQSMTQTQTLGTIGYMAP 596
+ E T + T Y AP
Sbjct: 173 RHTDDE-----MTGYVATRWYRAP 191
>pdb|4FMZ|A Chain A, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
pdb|4FMZ|B Chain B, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
Length = 347
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 107/237 (45%), Gaps = 24/237 (10%)
Query: 106 LRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLE 165
L NLE L L+ N +T +P LSN LT + + N + I +++ NL+ +L
Sbjct: 65 LTNLEYLNLNGNQITDISP-------LSNLVKLTNLYIGTNKITDI---SALQNLT-NLR 113
Query: 166 EFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGS 225
E Y+ NIS P ++NLT ++LG N N S L L L + ++ ++
Sbjct: 114 ELYLNEDNISDISP--LANLTKXYSLNLGANH-NLSDLSPLSNXTGLNYLTVTESKVKDV 170
Query: 226 IPDDICRLAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSIPLTFWNLKDILQ 285
P I L +LY L L N++ P +L SL + N++T I N +
Sbjct: 171 TP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDIT-PVANXTRLNS 225
Query: 286 LNFSSNFLTGPLLLEIGNLKVLIGIDFSMNNFSGVIPREIGEKLSYLEDLNLSFNKL 342
L +N +T L + NL L ++ N S + + L+ L+ LN+ N++
Sbjct: 226 LKIGNNKITD--LSPLANLSQLTWLEIGTNQISDI---NAVKDLTKLKXLNVGSNQI 277
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 70/140 (50%), Gaps = 20/140 (14%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSN----EEFKA--LVLEYMPHGSLEKYLYSSN 516
RA++ E +MK + H+N+I +++ + EEF+ LV+E M +L + +
Sbjct: 69 RAYR----ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQME- 122
Query: 517 CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT 576
LD + ++ + +++LH SA +IH DLKPSN+++ + + DF +A+
Sbjct: 123 --LDHERMSYLLYQMLXGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAG 177
Query: 577 GEDQSMTQTQTLGTIGYMAP 596
S T + T Y AP
Sbjct: 178 T---SFMMTPYVVTRYYRAP 194
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 60/144 (41%), Gaps = 30/144 (20%)
Query: 442 RATDEFSENNLIGRGGFALFIRAFKSFD-----------------VECEMMKSI------ 478
R T EF E IG G F + K D E ++ +
Sbjct: 4 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 63
Query: 479 -RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL---NIMIDVASA 534
+H ++++ S+ + ++ + EY GSL + + I+ F+ ++++ V
Sbjct: 64 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 123
Query: 535 LEYLHFGYSALVIHCDLKPSNVLL 558
L Y+H S ++H D+KPSN+ +
Sbjct: 124 LRYIH---SMSLVHMDIKPSNIFI 144
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 70/140 (50%), Gaps = 20/140 (14%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSN----EEFKA--LVLEYMPHGSLEKYLYSSN 516
RA++ E +MK + H+N+I +++ + EEF+ LV+E M +L + +
Sbjct: 62 RAYR----ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQME- 115
Query: 517 CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT 576
LD + ++ + +++LH SA +IH DLKPSN+++ + + DF +A+
Sbjct: 116 --LDHERMSYLLYQMLXGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR--- 167
Query: 577 GEDQSMTQTQTLGTIGYMAP 596
S T + T Y AP
Sbjct: 168 TAGTSFMMTPYVVTRYYRAP 187
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 60/144 (41%), Gaps = 30/144 (20%)
Query: 442 RATDEFSENNLIGRGGFALFIRAFKSFD-----------------VECEMMKSI------ 478
R T EF E IG G F + K D E ++ +
Sbjct: 8 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 67
Query: 479 -RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL---NIMIDVASA 534
+H ++++ S+ + ++ + EY GSL + + I+ F+ ++++ V
Sbjct: 68 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 127
Query: 535 LEYLHFGYSALVIHCDLKPSNVLL 558
L Y+H S ++H D+KPSN+ +
Sbjct: 128 LRYIH---SMSLVHMDIKPSNIFI 148
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 63/126 (50%), Gaps = 7/126 (5%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +M+ +H N++++ +S + +V+E++ G+L + ++ ++ Q + +
Sbjct: 121 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV--THTRMNEEQIAAVCLA 178
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
V AL LH + VIH D+K ++LL + LSDF ++ E + +GT
Sbjct: 179 VLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGT 233
Query: 591 IGYMAP 596
+MAP
Sbjct: 234 PYWMAP 239
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 60/144 (41%), Gaps = 30/144 (20%)
Query: 442 RATDEFSENNLIGRGGFALFIRAFKSFD-----------------VECEMMKSI------ 478
R T EF E IG G F + K D E ++ +
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 65
Query: 479 -RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL---NIMIDVASA 534
+H ++++ S+ + ++ + EY GSL + + I+ F+ ++++ V
Sbjct: 66 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 125
Query: 535 LEYLHFGYSALVIHCDLKPSNVLL 558
L Y+H S ++H D+KPSN+ +
Sbjct: 126 LRYIH---SMSLVHMDIKPSNIFI 146
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 62/140 (44%), Gaps = 13/140 (9%)
Query: 463 RAFKSFDVECE--MMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILD 520
R D+E E ++K I+H N+I + N+ L+LE + G L +L + +
Sbjct: 54 RGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE 113
Query: 521 IFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVA----HLSDFSIAKLLT 576
+ + + + + YLH S + H DLKP N++L D V + DF +A +
Sbjct: 114 E-EATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI- 168
Query: 577 GEDQSMTQTQTLGTIGYMAP 596
D GT ++AP
Sbjct: 169 --DFGNEFKNIFGTPEFVAP 186
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 20/166 (12%)
Query: 440 LCRATDEFSENNLIGRG---GFALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSN 492
+C A D E N+ + F A +++ E +MK + H+N+I +++ S
Sbjct: 40 VCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGLLNVFTPQKSL 98
Query: 493 EEFKA--LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCD 550
EEF+ +V+E M +L + + LD + ++ + +++LH SA +IH D
Sbjct: 99 EEFQDVYIVMELM-DANLSQVI---QMELDHERMSYLLYQMLVGIKHLH---SAGIIHRD 151
Query: 551 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
LKPSN+++ + + DF +A+ S T + T Y AP
Sbjct: 152 LKPSNIVVKSDATLKILDFGLARTAGT---SFMMTPYVVTRYYRAP 194
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 70/140 (50%), Gaps = 20/140 (14%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSN----EEFKA--LVLEYMPHGSLEKYLYSSN 516
RA++ E +MK + H+N+I +++ + EEF+ LV+E M +L + +
Sbjct: 69 RAYR----ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQME- 122
Query: 517 CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT 576
LD + ++ + +++LH SA +IH DLKPSN+++ + + DF +A+
Sbjct: 123 --LDHERMSYLLYQMLXGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAG 177
Query: 577 GEDQSMTQTQTLGTIGYMAP 596
S T + T Y AP
Sbjct: 178 T---SFMMTPYVVTRYYRAP 194
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 62/140 (44%), Gaps = 13/140 (9%)
Query: 463 RAFKSFDVECE--MMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILD 520
R D+E E ++K I+H N+I + N+ L+LE + G L +L + +
Sbjct: 54 RGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE 113
Query: 521 IFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVA----HLSDFSIAKLLT 576
+ + + + + YLH S + H DLKP N++L D V + DF +A +
Sbjct: 114 E-EATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI- 168
Query: 577 GEDQSMTQTQTLGTIGYMAP 596
D GT ++AP
Sbjct: 169 --DFGNEFKNIFGTPEFVAP 186
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 70/140 (50%), Gaps = 20/140 (14%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSN----EEFKA--LVLEYMPHGSLEKYLYSSN 516
RA++ E +MK + H+N+I +++ + EEF+ LV+E M +L + +
Sbjct: 69 RAYR----ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQME- 122
Query: 517 CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT 576
LD + ++ + +++LH SA +IH DLKPSN+++ + + DF +A+
Sbjct: 123 --LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR--- 174
Query: 577 GEDQSMTQTQTLGTIGYMAP 596
S T + T Y AP
Sbjct: 175 TAGTSFMMTPYVVTRYYRAP 194
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 60/144 (41%), Gaps = 30/144 (20%)
Query: 442 RATDEFSENNLIGRGGFALFIRAFKSFD-----------------VECEMMKSI------ 478
R T EF E IG G F + K D E ++ +
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 65
Query: 479 -RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL---NIMIDVASA 534
+H ++++ S+ + ++ + EY GSL + + I+ F+ ++++ V
Sbjct: 66 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 125
Query: 535 LEYLHFGYSALVIHCDLKPSNVLL 558
L Y+H S ++H D+KPSN+ +
Sbjct: 126 LRYIH---SMSLVHMDIKPSNIFI 146
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 77/169 (45%), Gaps = 19/169 (11%)
Query: 436 SYLELCRATDEFSENNLIGRG---GFALFIRAFKSFDVECEMMKSIRHRNLIKVIS---- 488
+Y +C A D + + + + F I A +++ E ++K ++H N+I ++
Sbjct: 54 AYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTP 112
Query: 489 SCSNEEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVI 547
+ S EEF + L ++ L + D Q L + + L+Y+H SA +I
Sbjct: 113 ARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADII 167
Query: 548 HCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
H DLKPSN+ ++++ + DF +A+ E + T Y AP
Sbjct: 168 HRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MXGXVATRWYRAP 211
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/119 (21%), Positives = 54/119 (45%), Gaps = 5/119 (4%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +M + H LI + + ++ L+LE++ G L + + + + + +N M
Sbjct: 98 EISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQ 157
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLS--DFSIAKLLTGEDQSMTQTQT 587
L+++H ++H D+KP N++ + + + DF +A L ++ T T
Sbjct: 158 ACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTAT 213
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 20/166 (12%)
Query: 440 LCRATDEFSENNLIGRG---GFALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSN 492
+C A D E N+ + F A +++ E +MK + H+N+I +++ S
Sbjct: 40 VCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSL 98
Query: 493 EEFKA--LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCD 550
EEF+ +V+E M +L + + LD + ++ + +++LH SA +IH D
Sbjct: 99 EEFQDVYIVMELM-DANLSQVIQME---LDHERMSYLLYQMLCGIKHLH---SAGIIHRD 151
Query: 551 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
LKPSN+++ + + DF +A+ S T + T Y AP
Sbjct: 152 LKPSNIVVKSDATLKILDFGLARTAGT---SFMMTPYVVTRYYRAP 194
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 77/169 (45%), Gaps = 19/169 (11%)
Query: 436 SYLELCRATDEFSENNLIGRG---GFALFIRAFKSFDVECEMMKSIRHRNLIKVIS---- 488
+Y +C A D + + + + F I A +++ E ++K ++H N+I ++
Sbjct: 30 AYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTP 88
Query: 489 SCSNEEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVI 547
+ S EEF + L ++ L + D Q L + + L+Y+H SA +I
Sbjct: 89 ARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADII 143
Query: 548 HCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
H DLKPSN+ ++++ + DF +A+ E T+ Y AP
Sbjct: 144 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----WYRAP 187
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 63/126 (50%), Gaps = 7/126 (5%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +M+ +H N++++ +S + +V+E++ G+L + ++ ++ Q + +
Sbjct: 198 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV--THTRMNEEQIAAVCLA 255
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
V AL LH + VIH D+K ++LL + LSDF ++ E + +GT
Sbjct: 256 VLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGT 310
Query: 591 IGYMAP 596
+MAP
Sbjct: 311 PYWMAP 316
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 20/166 (12%)
Query: 440 LCRATDEFSENNLIGRG---GFALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSN 492
+C A D E N+ + F A +++ E +MK + H+N+I +++ S
Sbjct: 40 VCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGLLNVFTPQKSL 98
Query: 493 EEFKA--LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCD 550
EEF+ +V+E M +L + + LD + ++ + +++LH SA +IH D
Sbjct: 99 EEFQDVYIVMELM-DANLSQVI---QMELDHERMSYLLYQMLCGIKHLH---SAGIIHRD 151
Query: 551 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
LKPSN+++ + + DF +A+ S T + T Y AP
Sbjct: 152 LKPSNIVVKSDATLKILDFGLARTAGT---SFMMTPYVVTRYYRAP 194
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 5/132 (3%)
Query: 465 FKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQR 524
+ + VE +++ S H N++K++ + E +++E+ G+++ + L Q
Sbjct: 78 LEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQI 137
Query: 525 LNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 584
+ AL YLH +IH DLK N+L + L+DF ++ T Q +
Sbjct: 138 QVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQR--R 192
Query: 585 TQTLGTIGYMAP 596
+GT +MAP
Sbjct: 193 DSFIGTPYWMAP 204
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 62/140 (44%), Gaps = 13/140 (9%)
Query: 463 RAFKSFDVECE--MMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILD 520
R D+E E ++K I+H N+I + N+ L+LE + G L +L + +
Sbjct: 54 RGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE 113
Query: 521 IFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVA----HLSDFSIAKLLT 576
+ + + + + YLH S + H DLKP N++L D V + DF +A +
Sbjct: 114 E-EATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI- 168
Query: 577 GEDQSMTQTQTLGTIGYMAP 596
D GT ++AP
Sbjct: 169 --DFGNEFKNIFGTPAFVAP 186
>pdb|2O6R|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B61
Length = 177
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 8/103 (7%)
Query: 173 NISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDIC- 231
++ GIP + L +L NKL KL +L +L+L N ++ S+PD +
Sbjct: 21 SVPTGIPSSATRL------ELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQ-SLPDGVFD 73
Query: 232 RLAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSIP 274
+L +L L L NKL F L L+ L+L +N+L S+P
Sbjct: 74 KLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVP 116
Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 25/112 (22%)
Query: 238 RLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSIPLTFWNLKDILQLNFSSNFLTGPL 297
RLEL SNKL F L L LSL N++ S+P ++
Sbjct: 32 RLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFD------------------ 73
Query: 298 LLEIGNLKVLIGIDFSMNNFSGVIPREIGEKLSYLEDLNLSFNKLKGEIPRG 349
++ L +L + N +P + +KL+ L++L L N+LK +P G
Sbjct: 74 --KLTKLTIL----YLHENKLQSLPNGVFDKLTQLKELALDTNQLKS-VPDG 118
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 70/140 (50%), Gaps = 20/140 (14%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVIS----SCSNEEFKA--LVLEYMPHGSLEKYLYSSN 516
RA++ E +MK + H+N+I +++ S EEF+ +V+E M +L + +
Sbjct: 69 RAYR----ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI---Q 120
Query: 517 CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT 576
LD + ++ + +++LH SA +IH DLKPSN+++ + + DF +A+
Sbjct: 121 MELDHERMSYLLYQMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAG 177
Query: 577 GEDQSMTQTQTLGTIGYMAP 596
S T + T Y AP
Sbjct: 178 T---SFMMTPYVVTRYYRAP 194
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 20/166 (12%)
Query: 440 LCRATDEFSENNLIGRG---GFALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSN 492
+C A D E N+ + F A +++ E +MK + H+N+I +++ S
Sbjct: 40 VCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGLLNVFTPQKSL 98
Query: 493 EEFKA--LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCD 550
EEF+ +V+E M +L + + LD + ++ + +++LH SA +IH D
Sbjct: 99 EEFQDVYIVMELM-DANLSQVI---QMELDHERMSYLLYQMLVGIKHLH---SAGIIHRD 151
Query: 551 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
LKPSN+++ + + DF +A+ S T + T Y AP
Sbjct: 152 LKPSNIVVKSDATLKILDFGLARTAGT---SFMMTPYVVTRYYRAP 194
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 62/140 (44%), Gaps = 13/140 (9%)
Query: 463 RAFKSFDVECE--MMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILD 520
R D+E E ++K I+H N+I + N+ L+LE + G L +L + +
Sbjct: 53 RGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE 112
Query: 521 IFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVA----HLSDFSIAKLLT 576
+ + + + + YLH S + H DLKP N++L D V + DF +A +
Sbjct: 113 E-EATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI- 167
Query: 577 GEDQSMTQTQTLGTIGYMAP 596
D GT ++AP
Sbjct: 168 --DFGNEFKNIFGTPEFVAP 185
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 54/116 (46%), Gaps = 10/116 (8%)
Query: 463 RAFKSFDVECE--MMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILD 520
R D+E E ++K I+H N+I + N+ L+LE + G L +L + +
Sbjct: 54 RGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE 113
Query: 521 IFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVA----HLSDFSIA 572
+ + + + + YLH S + H DLKP N++L D V + DF +A
Sbjct: 114 E-EATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 5/132 (3%)
Query: 465 FKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQR 524
+ + VE +++ S H N++K++ + E +++E+ G+++ + L Q
Sbjct: 78 LEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQI 137
Query: 525 LNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 584
+ AL YLH +IH DLK N+L + L+DF ++ T Q +
Sbjct: 138 QVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQR--R 192
Query: 585 TQTLGTIGYMAP 596
+GT +MAP
Sbjct: 193 DXFIGTPYWMAP 204
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 77/171 (45%), Gaps = 22/171 (12%)
Query: 419 KPSNDANMPLVATWR----TFSYLELCRATDEFSENNLIGRGGFALFIRAFKSFDVECE- 473
+P +D +P R T SY +C A D+ + + +R F+ ++C+
Sbjct: 44 RPHSDWQIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVV----AIKKILRVFEDL-IDCKR 98
Query: 474 ------MMKSIRHRNLIKVISSC---SNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQR 524
++ + H +++KV+ E+F L + S K L+ + L
Sbjct: 99 ILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHI 158
Query: 525 LNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLL 575
++ ++ ++Y+H SA ++H DLKP+N L++ + + DF +A+ +
Sbjct: 159 KTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLARTV 206
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 54/116 (46%), Gaps = 10/116 (8%)
Query: 463 RAFKSFDVECE--MMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILD 520
R D+E E ++K I+H N+I + N+ L+LE + G L +L + +
Sbjct: 54 RGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE 113
Query: 521 IFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVA----HLSDFSIA 572
+ + + + + YLH S + H DLKP N++L D V + DF +A
Sbjct: 114 E-EATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 7/132 (5%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+ F E M+ H +++K+I + E +++E G L +L LD+ +
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKFSLDLASLI 114
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ- 584
+++AL YL S +H D+ NVL+ N L DF +++ + ED + +
Sbjct: 115 LYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTXXKA 169
Query: 585 TQTLGTIGYMAP 596
++ I +MAP
Sbjct: 170 SKGKLPIKWMAP 181
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 62/140 (44%), Gaps = 13/140 (9%)
Query: 463 RAFKSFDVECE--MMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILD 520
R D+E E ++K I+H N+I + N+ L+LE + G L +L + +
Sbjct: 54 RGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE 113
Query: 521 IFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVA----HLSDFSIAKLLT 576
+ + + + + YLH S + H DLKP N++L D V + DF +A +
Sbjct: 114 E-EATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI- 168
Query: 577 GEDQSMTQTQTLGTIGYMAP 596
D GT ++AP
Sbjct: 169 --DFGNEFKNIFGTPEFVAP 186
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 62/126 (49%), Gaps = 11/126 (8%)
Query: 458 FALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSNEEFKALVL-EYMPHGSLEKYL 512
F I A +++ E ++K ++H N+I ++ + S EEF + L ++ L +
Sbjct: 82 FQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 140
Query: 513 YSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIA 572
D Q L + + L+Y+H SA +IH DLKPSN+ ++++ + DF +A
Sbjct: 141 KCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA 195
Query: 573 KLLTGE 578
+ E
Sbjct: 196 RHTDDE 201
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 10/108 (9%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++K ++HRN+I++ S + L+ EY L+KY+ + D+ R+ I
Sbjct: 83 EVSLLKELQHRNIIELKSVIHHNHRLHLIFEYA-ENDLKKYMDKNP---DVSMRV-IKSF 137
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLL-----DDNMVAHLSDFSIAK 573
+ + ++F +S +H DLKP N+LL + V + DF +A+
Sbjct: 138 LYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 62/140 (44%), Gaps = 13/140 (9%)
Query: 463 RAFKSFDVECE--MMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILD 520
R D+E E ++K I+H N+I + N+ L+LE + G L +L + +
Sbjct: 54 RGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE 113
Query: 521 IFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVA----HLSDFSIAKLLT 576
+ + + + + YLH S + H DLKP N++L D V + DF +A +
Sbjct: 114 E-EATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI- 168
Query: 577 GEDQSMTQTQTLGTIGYMAP 596
D GT ++AP
Sbjct: 169 --DFGNEFKNIFGTPEFVAP 186
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 62/140 (44%), Gaps = 13/140 (9%)
Query: 463 RAFKSFDVECE--MMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILD 520
R D+E E ++K I+H N+I + N+ L+LE + G L +L + +
Sbjct: 54 RGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE 113
Query: 521 IFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVA----HLSDFSIAKLLT 576
+ + + + + YLH S + H DLKP N++L D V + DF +A +
Sbjct: 114 E-EATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI- 168
Query: 577 GEDQSMTQTQTLGTIGYMAP 596
D GT ++AP
Sbjct: 169 --DFGNEFKNIFGTPEFVAP 186
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 62/140 (44%), Gaps = 13/140 (9%)
Query: 463 RAFKSFDVECE--MMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILD 520
R D+E E ++K I+H N+I + N+ L+LE + G L +L + +
Sbjct: 53 RGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE 112
Query: 521 IFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVA----HLSDFSIAKLLT 576
+ + + + + YLH S + H DLKP N++L D V + DF +A +
Sbjct: 113 E-EATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI- 167
Query: 577 GEDQSMTQTQTLGTIGYMAP 596
D GT ++AP
Sbjct: 168 --DFGNEFKNIFGTPEFVAP 185
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 7/132 (5%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+ F E M+ H +++K+I + E +++E G L +L LD+ +
Sbjct: 84 EKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLI 142
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ- 584
+++AL YL S +H D+ NVL+ N L DF +++ + ED + +
Sbjct: 143 LYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKA 197
Query: 585 TQTLGTIGYMAP 596
++ I +MAP
Sbjct: 198 SKGKLPIKWMAP 209
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/147 (19%), Positives = 66/147 (44%), Gaps = 12/147 (8%)
Query: 459 ALFIRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYS---- 514
A +R F E +MK ++++++ S + +++E M G L+ YL S
Sbjct: 51 AASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE 110
Query: 515 --SNCIL---DIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDF 569
+N +L + + + + ++A + YL+ + +H DL N ++ ++ + DF
Sbjct: 111 MENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDF 167
Query: 570 SIAKLLTGEDQSMTQTQTLGTIGYMAP 596
+ + + D + L + +M+P
Sbjct: 168 GMTRDIXETDXXRKGGKGLLPVRWMSP 194
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 20/166 (12%)
Query: 440 LCRATDEFSENNLIGRG---GFALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSN 492
+C A D E N+ + F A +++ E +MK + H+N+I +++ S
Sbjct: 40 VCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSL 98
Query: 493 EEFKA--LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCD 550
EEF+ +V+E M +L + + LD + ++ + +++LH SA +IH D
Sbjct: 99 EEFQDVYIVMELM-DANLSQVIQME---LDHERMSYLLYQMLCGIKHLH---SAGIIHRD 151
Query: 551 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
LKPSN+++ + + DF +A+ S T + T Y AP
Sbjct: 152 LKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVTRYYRAP 194
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 7/132 (5%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+ F E M+ H +++K+I + E +++E G L +L LD+ +
Sbjct: 61 EKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLI 119
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ- 584
+++AL YL S +H D+ NVL+ N L DF +++ + ED + +
Sbjct: 120 LYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKA 174
Query: 585 TQTLGTIGYMAP 596
++ I +MAP
Sbjct: 175 SKGKLPIKWMAP 186
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 5/132 (3%)
Query: 465 FKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQR 524
+ + VE +++ S H N++K++ + E +++E+ G+++ + L Q
Sbjct: 78 LEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQI 137
Query: 525 LNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 584
+ AL YLH +IH DLK N+L + L+DF ++ T Q +
Sbjct: 138 QVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQR--R 192
Query: 585 TQTLGTIGYMAP 596
+GT +MAP
Sbjct: 193 DSFIGTPYWMAP 204
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 63/126 (50%), Gaps = 7/126 (5%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +M+ +H N++++ +S + +V+E++ G+L + ++ ++ Q + +
Sbjct: 78 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV--THTRMNEEQIAAVCLA 135
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
V AL LH + VIH D+K ++LL + LSDF ++ E + +GT
Sbjct: 136 VLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGT 190
Query: 591 IGYMAP 596
+MAP
Sbjct: 191 PYWMAP 196
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 10/129 (7%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +++K + H N++K+ ++ + LV E G L + S ++ I+
Sbjct: 100 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQ 158
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLD---DNMVAHLSDFSIAKLLTGEDQSMTQTQT 587
V S + Y+H ++H DLKP N+LL+ + + DF ++ T + S
Sbjct: 159 VLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS---THFEASKKMKDK 212
Query: 588 LGTIGYMAP 596
+GT Y+AP
Sbjct: 213 IGTAYYIAP 221
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 63/126 (50%), Gaps = 7/126 (5%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +M+ +H N++++ +S + +V+E++ G+L + ++ ++ Q + +
Sbjct: 67 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV--THTRMNEEQIAAVCLA 124
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
V AL LH + VIH D+K ++LL + LSDF ++ E + +GT
Sbjct: 125 VLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGT 179
Query: 591 IGYMAP 596
+MAP
Sbjct: 180 PYWMAP 185
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 77/169 (45%), Gaps = 19/169 (11%)
Query: 436 SYLELCRATDEFSENNLIGRG---GFALFIRAFKSFDVECEMMKSIRHRNLIKVIS---- 488
+Y +C A D + + + + F I A +++ E ++K ++H N+I ++
Sbjct: 34 AYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTP 92
Query: 489 SCSNEEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVI 547
+ S EEF + L ++ L + D Q L + + L+Y+H SA +I
Sbjct: 93 ARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADII 147
Query: 548 HCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
H DLKPSN+ ++++ + DF +A+ E T+ Y AP
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----WYRAP 191
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 60/133 (45%), Gaps = 18/133 (13%)
Query: 479 RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL---------YSSNCILDIFQRL---- 525
+H N++ ++ +C++ ++ EY +G L +L YS N + ++L
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRD 167
Query: 526 --NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMT 583
+ VA + +L S IH D+ NVLL + VA + DF +A+ + + +
Sbjct: 168 LLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 224
Query: 584 QTQTLGTIGYMAP 596
+ + +MAP
Sbjct: 225 KGNARLPVKWMAP 237
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 63/126 (50%), Gaps = 7/126 (5%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +M+ +H N++++ +S + +V+E++ G+L + ++ ++ Q + +
Sbjct: 71 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV--THTRMNEEQIAAVCLA 128
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
V AL LH + VIH D+K ++LL + LSDF ++ E + +GT
Sbjct: 129 VLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGT 183
Query: 591 IGYMAP 596
+MAP
Sbjct: 184 PYWMAP 189
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 57/127 (44%), Gaps = 6/127 (4%)
Query: 470 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 529
E + KS+ + +++ +++F +VLE SL + + + R M
Sbjct: 75 TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY-FMR 133
Query: 530 DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLG 589
++YLH + VIH DLK N+ L+D+M + DF +A + E + G
Sbjct: 134 QTIQGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI--EFDGERKKDLCG 188
Query: 590 TIGYMAP 596
T Y+AP
Sbjct: 189 TPNYIAP 195
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 10/129 (7%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +++K + H N++K+ ++ + LV E G L + S ++ I+
Sbjct: 99 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQ 157
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLD---DNMVAHLSDFSIAKLLTGEDQSMTQTQT 587
V S + Y+H ++H DLKP N+LL+ + + DF ++ T + S
Sbjct: 158 VLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS---THFEASKKMKDK 211
Query: 588 LGTIGYMAP 596
+GT Y+AP
Sbjct: 212 IGTAYYIAP 220
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 77/169 (45%), Gaps = 19/169 (11%)
Query: 436 SYLELCRATDEFSENNLIGRG---GFALFIRAFKSFDVECEMMKSIRHRNLIKVIS---- 488
+Y +C A D + + + + F I A +++ E ++K ++H N+I ++
Sbjct: 34 AYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTP 92
Query: 489 SCSNEEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVI 547
+ S EEF + L ++ L + D Q L + + L+Y+H SA +I
Sbjct: 93 ARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADII 147
Query: 548 HCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
H DLKPSN+ ++++ + DF +A+ E T+ Y AP
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----WYRAP 191
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/147 (19%), Positives = 66/147 (44%), Gaps = 12/147 (8%)
Query: 459 ALFIRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYS---- 514
A +R F E +MK ++++++ S + +++E M G L+ YL S
Sbjct: 60 AASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE 119
Query: 515 --SNCIL---DIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDF 569
+N +L + + + + ++A + YL+ + +H DL N ++ ++ + DF
Sbjct: 120 MENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDF 176
Query: 570 SIAKLLTGEDQSMTQTQTLGTIGYMAP 596
+ + + D + L + +M+P
Sbjct: 177 GMTRDIXETDXXRKGGKGLLPVRWMSP 203
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 63/126 (50%), Gaps = 7/126 (5%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +M+ +H N++++ +S + +V+E++ G+L + ++ ++ Q + +
Sbjct: 76 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV--THTRMNEEQIAAVCLA 133
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
V AL LH + VIH D+K ++LL + LSDF ++ E + +GT
Sbjct: 134 VLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGT 188
Query: 591 IGYMAP 596
+MAP
Sbjct: 189 PYWMAP 194
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 9/70 (12%)
Query: 528 MIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDF-SIAKLLTGEDQSMTQTQ 586
M+ ++ LH+ +H D+KP N+L+D N L+DF S KL+ ED ++ +
Sbjct: 184 MVIAIDSVHQLHY------VHRDIKPDNILMDMNGHIRLADFGSCLKLM--EDGTVQSSV 235
Query: 587 TLGTIGYMAP 596
+GT Y++P
Sbjct: 236 AVGTPDYISP 245
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 62/137 (45%), Gaps = 26/137 (18%)
Query: 472 CEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDV 531
C M+K H ++++++ + S++ +V E+M L +I +R +
Sbjct: 80 CHMLK---HPHIVELLETYSSDGMLYMVFEFMDGADL---------CFEIVKRADAGFVY 127
Query: 532 ASA---------LEYLHFGYSALVIHCDLKPSNVLL---DDNMVAHLSDFSIAKLLTGED 579
+ A LE L + + +IH D+KP NVLL +++ L DF +A L +
Sbjct: 128 SEAVASHYMRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLG--E 185
Query: 580 QSMTQTQTLGTIGYMAP 596
+ +GT +MAP
Sbjct: 186 SGLVAGGRVGTPHFMAP 202
>pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
pdb|3KJ4|D Chain D, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
Length = 286
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 104/242 (42%), Gaps = 17/242 (7%)
Query: 130 SSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEEFYMY-NCNISGGIPEEISNLTNL 188
+S +C++LT++ L +N L GI + + L+ LE+ + N + P L +L
Sbjct: 49 ASFQSCRNLTILWLHSNALAGI-DAAAFTGLT-LLEQLDLSDNAQLRVVDPTTFRGLGHL 106
Query: 189 VEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICR-LAELYRLELGSNKLY 247
+ L L P L LQ L L+DN L+ ++PD+ R L L L L N++
Sbjct: 107 HTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQ-ALPDNTFRDLGNLTHLFLHGNRIP 165
Query: 248 GSIPACFGNLASLRILSLGSNKLTSI-PLTFWNLKDILQLNFSSN---FLTGPLLLEIGN 303
F L SL L L N + + P F +L ++ L +N L +L+ + +
Sbjct: 166 SVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNLSMLPAEVLVPLRS 225
Query: 304 LKVLIGIDFSMNNFSGVIPREIGEKLSYLEDLNLSFNKLKGEIPR---GGSFGNFSAESF 360
L+ L +N+ V ++L+ S +++ +P+ G +A
Sbjct: 226 LQYL-----RLNDNPWVCDCRARPLWAWLQKFRGSSSEVPCNLPQRLAGRDLKRLAASDL 280
Query: 361 EG 362
EG
Sbjct: 281 EG 282
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 59/141 (41%), Gaps = 12/141 (8%)
Query: 58 LPNLEKLYLWGNNFSGTIPRFIFNA-SKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDE 116
L NL L+L GN ++P F L +L L N + P F +L L L L
Sbjct: 151 LGNLTHLFLHGNRIP-SVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFA 209
Query: 117 NYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCNISG 176
N L+ E+ L +SL + L++NP + L L++F + +
Sbjct: 210 NNLSMLPAEV-----LVPLRSLQYLRLNDNPW---VCDCRARPLWAWLQKFRGSSSEVPC 261
Query: 177 GIPEEIS--NLTNLVEIDLGG 195
+P+ ++ +L L DL G
Sbjct: 262 NLPQRLAGRDLKRLAASDLEG 282
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 11/130 (8%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E ++K I+H N+I + N+ L+LE + G L +L + + + +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQ 122
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVA----HLSDFSIAKLLTGEDQSMTQTQ 586
+ + + YLH S + H DLKP N++L D V + DF +A + D
Sbjct: 123 ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFKN 176
Query: 587 TLGTIGYMAP 596
GT ++AP
Sbjct: 177 IFGTPEFVAP 186
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/135 (19%), Positives = 58/135 (42%), Gaps = 12/135 (8%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILD---------I 521
E +MK ++++++ S + +V+E M HG L+ YL S + +
Sbjct: 70 EASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL 129
Query: 522 FQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQS 581
+ + + ++A + YL+ + +H DL N ++ + + DF + + +
Sbjct: 130 QEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYY 186
Query: 582 MTQTQTLGTIGYMAP 596
+ L + +MAP
Sbjct: 187 RKGGKGLLPVRWMAP 201
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 7/132 (5%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+ F E M+ H +++K+I + E +++E G L +L LD+ +
Sbjct: 59 EKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLI 117
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ- 584
+++AL YL S +H D+ NVL+ N L DF +++ + ED + +
Sbjct: 118 LYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKA 172
Query: 585 TQTLGTIGYMAP 596
++ I +MAP
Sbjct: 173 SKGKLPIKWMAP 184
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 7/132 (5%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+ F E M+ H +++K+I + E +++E G L +L LD+ +
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLI 114
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ- 584
+++AL YL S +H D+ NVL+ N L DF +++ + ED + +
Sbjct: 115 LYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKA 169
Query: 585 TQTLGTIGYMAP 596
++ I +MAP
Sbjct: 170 SKGKLPIKWMAP 181
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 44/96 (45%), Gaps = 11/96 (11%)
Query: 209 LRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKLYGSIPACFGNLASLRILSLGSN 268
L LQ N+ NI + L RL L N L +PA NL++LR+L L N
Sbjct: 231 LSNLQIFNISANIFKYDF---------LTRLYLNGNSL-TELPAEIKNLSNLRVLDLSHN 280
Query: 269 KLTSIPLTFWNLKDILQLNFSSNFLTGPLLLEIGNL 304
+LTS+P + + F N +T L E GNL
Sbjct: 281 RLTSLPAELGSCFQLKYFYFFDNMVTT-LPWEFGNL 315
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 26/100 (26%)
Query: 171 NCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDI 230
N N +P EI NL+NL +DL N+L S+P LG +L+ DN++
Sbjct: 255 NGNSLTELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMV-------- 305
Query: 231 CRLAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKL 270
++P FGNL +L+ L + N L
Sbjct: 306 -----------------TTLPWEFGNLCNLQFLGVEGNPL 328
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 10/129 (7%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +++K + H N++K+ ++ + LV E G L + S ++ I+
Sbjct: 76 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQ 134
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLD---DNMVAHLSDFSIAKLLTGEDQSMTQTQT 587
V S + Y+H ++H DLKP N+LL+ + + DF ++ T + S
Sbjct: 135 VLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS---THFEASKKMKDK 188
Query: 588 LGTIGYMAP 596
+GT Y+AP
Sbjct: 189 IGTAYYIAP 197
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 7/132 (5%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+ F E M+ H +++K+I + E +++E G L +L LD+ +
Sbjct: 58 EKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLI 116
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ- 584
+++AL YL S +H D+ NVL+ N L DF +++ + ED + +
Sbjct: 117 LYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKA 171
Query: 585 TQTLGTIGYMAP 596
++ I +MAP
Sbjct: 172 SKGKLPIKWMAP 183
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 57/131 (43%), Gaps = 17/131 (12%)
Query: 480 HRNLIKVISSCSNEEFKALVL-EYMPHGSLEKYL---------YSSNCILDIFQRLNIMI 529
H N++ ++ +C+ +V+ E+ G+L YL Y + F L +I
Sbjct: 92 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLI 151
Query: 530 ----DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 585
VA +E+L S IH DL N+LL + V + DF +A+ + + + +
Sbjct: 152 XYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 208
Query: 586 QTLGTIGYMAP 596
+ +MAP
Sbjct: 209 DARLPLKWMAP 219
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 7/132 (5%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+ F E M+ H +++K+I + E +++E G L +L LD+ +
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLI 114
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ- 584
+++AL YL S +H D+ NVL+ N L DF +++ + ED + +
Sbjct: 115 LYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKA 169
Query: 585 TQTLGTIGYMAP 596
++ I +MAP
Sbjct: 170 SKGKLPIKWMAP 181
>pdb|3O6N|A Chain A, Crystal Structure Of Apl1 Leucine-Rich Repeat Domain
Length = 390
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 83/182 (45%), Gaps = 30/182 (16%)
Query: 58 LPNLEKLYLWGNNFSGTIPRFIF-NASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDE 116
+P L L L N+ S ++PR IF N KL+ LS+ N+ TF +L+ L L
Sbjct: 116 VPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSS 174
Query: 117 NYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCNISG 176
N LT +LS + SL + ++S N L + ++ L S + + G
Sbjct: 175 NRLTHV--DLSLIPSLFHA------NVSYNLLSTLAIPIAVEELDASHNSINV----VRG 222
Query: 177 GIPEEIS-------NLTN---------LVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDN 220
+ E++ NLT+ LVE+DL N+L + K+++L+RL + +N
Sbjct: 223 PVNVELTILKLQHNNLTDTAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNN 282
Query: 221 IL 222
L
Sbjct: 283 RL 284
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 7/132 (5%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+ F E M+ H +++K+I + E +++E G L +L LD+ +
Sbjct: 53 EKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLI 111
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ- 584
+++AL YL S +H D+ NVL+ N L DF +++ + ED + +
Sbjct: 112 LYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKA 166
Query: 585 TQTLGTIGYMAP 596
++ I +MAP
Sbjct: 167 SKGKLPIKWMAP 178
>pdb|4FCG|A Chain A, Structure Of The Leucine-Rich Repeat Domain Of The Type
Iii Effector Xcv3220 (Xopl)
Length = 328
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 96/218 (44%), Gaps = 35/218 (16%)
Query: 72 SGTIPRFIFNASKLSKLSLGMNSFSGF--IPSTFGNLRNLEQLGLDEN---YLTSSTPEL 126
S +P+F A +LS L +G +P T LE L L N L +S L
Sbjct: 90 SVPLPQFPDQAFRLSHLQHXTIDAAGLXELPDTXQQFAGLETLTLARNPLRALPASIASL 149
Query: 127 SFLSSLS--NCKSLT-----------------LIDLSNNPLD--GI--LPKTSISNLSRS 163
+ L LS C LT L++L + L+ GI LP SI+NL ++
Sbjct: 150 NRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIRSLP-ASIANL-QN 207
Query: 164 LEEFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLED--NI 221
L+ + N +S P I +L L E+DL G + P G L+RL L+D N+
Sbjct: 208 LKSLKIRNSPLSALGPA-IHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNL 266
Query: 222 LEGSIPDDICRLAELYRLELGSNKLYGSIPACFGNLAS 259
L ++P DI RL +L +L+L +P+ L +
Sbjct: 267 L--TLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPA 302
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 585
I + + ALE+LH S VIH D+KPSNVL++ DF I+ L + + +
Sbjct: 140 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVDD---VAKD 194
Query: 586 QTLGTIGYMAP 596
G Y AP
Sbjct: 195 IDAGCKPYXAP 205
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 54/116 (46%), Gaps = 10/116 (8%)
Query: 463 RAFKSFDVECE--MMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILD 520
R D+E E ++K I+H N+I + N+ L+LE + G L +L + +
Sbjct: 54 RGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE 113
Query: 521 IFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVA----HLSDFSIA 572
+ + + + + YLH S + H DLKP N++L D V + DF +A
Sbjct: 114 E-EATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 8/128 (6%)
Query: 470 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 529
E + KS+ + +++ +++F +VLE SL + + + R M
Sbjct: 91 TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY-FMR 149
Query: 530 DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTL- 588
++YLH + VIH DLK N+ L+D+M + DF +A + + + + +TL
Sbjct: 150 QTIQGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE---RKKTLC 203
Query: 589 GTIGYMAP 596
GT Y+AP
Sbjct: 204 GTPNYIAP 211
>pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 206 LGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKLYGSIPACFGNLASLRILSL 265
G+L L +L L+ N L G P+ + + L+LG NK+ F L L+ L+L
Sbjct: 50 FGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109
Query: 266 GSNKLTSI-PLTFWNLKDILQLNFSSN 291
N+++ + P +F +L + LN +SN
Sbjct: 110 YDNQISCVMPGSFEHLNSLTSLNLASN 136
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 57/127 (44%), Gaps = 6/127 (4%)
Query: 470 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 529
E + KS+ + +++ +++F +VLE SL + + + R M
Sbjct: 91 TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY-FMR 149
Query: 530 DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLG 589
++YLH + VIH DLK N+ L+D+M + DF +A + E + G
Sbjct: 150 QTIQGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI--EFDGERKKDLCG 204
Query: 590 TIGYMAP 596
T Y+AP
Sbjct: 205 TPNYIAP 211
>pdb|3OJA|B Chain B, Crystal Structure Of Lrim1APL1C COMPLEX
Length = 597
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 84/177 (47%), Gaps = 20/177 (11%)
Query: 58 LPNLEKLYLWGNNFSGTIPRFIF-NASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDE 116
+P L L L N+ S ++PR IF N KL+ LS+ N+ TF +L+ L L
Sbjct: 122 VPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSS 180
Query: 117 NYLT----SSTPEL-------SFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLE 165
N LT S P L + LS+L+ ++ +D S+N ++ + ++ L
Sbjct: 181 NRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVE-----LT 235
Query: 166 EFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNIL 222
+ + N++ + N LVE+DL N+L + K+++L+RL + +N L
Sbjct: 236 ILKLQHNNLTDTA--WLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRL 290
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 66/179 (36%), Gaps = 50/179 (27%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL------YSSN 516
+ + E +MK + H N+ ++ +E++ LV+E G L L +
Sbjct: 70 KDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGK 129
Query: 517 CILDIFQRL---------------------------------NIMIDVASALEYLHFGYS 543
C +D+ + NIM + SAL YLH +
Sbjct: 130 CAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLH---N 186
Query: 544 ALVIHCDLKPSNVLLDDN--MVAHLSDFSIA----KLLTGEDQSMTQTQTLGTIGYMAP 596
+ H D+KP N L N L DF ++ KL GE MT GT ++AP
Sbjct: 187 QGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKA--GTPYFVAP 243
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 20/166 (12%)
Query: 440 LCRATDEFSENNLIGRG---GFALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSN 492
+C A D E N+ + F A +++ E +MK + H+N+I +++ S
Sbjct: 40 VCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSL 98
Query: 493 EEFKA--LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCD 550
EEF+ +V+E M +L + + LD + ++ + +++LH SA +IH D
Sbjct: 99 EEFQDVYIVMELM-DANLCQVIQME---LDHERMSYLLYQMLCGIKHLH---SAGIIHRD 151
Query: 551 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
LKPSN+++ + + DF +A+ S T + T Y AP
Sbjct: 152 LKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPEVVTRYYRAP 194
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 60/130 (46%), Gaps = 11/130 (8%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +++ + H N+I + N L+LE + G L +L + + + + +
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEE-EATSFIKQ 123
Query: 531 VASALEYLHFGYSALVIHCDLKPSNV-LLDDNM-VAHLS--DFSIAKLLTGEDQSMTQTQ 586
+ + YLH + + H DLKP N+ LLD N+ + H+ DF +A + + +
Sbjct: 124 ILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKN 177
Query: 587 TLGTIGYMAP 596
GT ++AP
Sbjct: 178 IFGTPEFVAP 187
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 7/132 (5%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+ F E M+ H +++K+I + E +++E G L +L LD+ +
Sbjct: 436 EKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKFSLDLASLI 494
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ- 584
+++AL YL S +H D+ NVL+ N L DF +++ + ED + +
Sbjct: 495 LYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKA 549
Query: 585 TQTLGTIGYMAP 596
++ I +MAP
Sbjct: 550 SKGKLPIKWMAP 561
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 60/130 (46%), Gaps = 11/130 (8%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +++ + H N+I + N L+LE + G L +L + + + + +
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEE-EATSFIKQ 123
Query: 531 VASALEYLHFGYSALVIHCDLKPSNV-LLDDNM-VAHLS--DFSIAKLLTGEDQSMTQTQ 586
+ + YLH + + H DLKP N+ LLD N+ + H+ DF +A + + +
Sbjct: 124 ILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKN 177
Query: 587 TLGTIGYMAP 596
GT ++AP
Sbjct: 178 IFGTPEFVAP 187
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 56/128 (43%), Gaps = 19/128 (14%)
Query: 476 KSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL-----YSSNCILDIFQRLNIMID 530
+S+RH N+++ A+V+EY G L + + +S + FQ+L
Sbjct: 70 RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL----- 124
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLS--DFSIAKLLTGEDQSMTQTQTL 588
S + Y H + V H DLK N LLD + L DF +K Q + T+
Sbjct: 125 -ISGVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS---TV 177
Query: 589 GTIGYMAP 596
GT Y+AP
Sbjct: 178 GTPAYIAP 185
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 56/128 (43%), Gaps = 19/128 (14%)
Query: 476 KSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL-----YSSNCILDIFQRLNIMID 530
+S+RH N+++ A+++EY G L + + +S + FQ+L
Sbjct: 71 RSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQL----- 125
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLS--DFSIAKLLTGEDQSMTQTQTL 588
S + Y H S + H DLK N LLD + L DF +K Q + T+
Sbjct: 126 -LSGVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS---TV 178
Query: 589 GTIGYMAP 596
GT Y+AP
Sbjct: 179 GTPAYIAP 186
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 70/140 (50%), Gaps = 20/140 (14%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSN----EEFKA--LVLEYMPHGSLEKYLYSSN 516
RA++ E +MK + H+N+I +++ + EEF+ LV+E M +L + +
Sbjct: 69 RAYR----ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME- 122
Query: 517 CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT 576
LD + ++ + +++LH SA +IH DLKPSN+++ + + DF +A+
Sbjct: 123 --LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR--- 174
Query: 577 GEDQSMTQTQTLGTIGYMAP 596
S T + T Y AP
Sbjct: 175 TAGTSFMMTPYVVTRYYRAP 194
>pdb|2R9U|A Chain A, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|B Chain B, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|C Chain C, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|D Chain D, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
Length = 174
Score = 37.0 bits (84), Expect = 0.032, Method: Composition-based stats.
Identities = 32/92 (34%), Positives = 43/92 (46%), Gaps = 29/92 (31%)
Query: 58 LPNLEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDEN 117
L NL++LY FN++KL+ + G+ F L L QL L++N
Sbjct: 56 LVNLQQLY--------------FNSNKLTAIPTGV----------FDKLTQLTQLDLNDN 91
Query: 118 YLTSSTPELSFLSSLSNCKSLTLIDLSNNPLD 149
+L S P +F N KSLT I L NNP D
Sbjct: 92 HL-KSIPRGAF----DNLKSLTHIYLYNNPWD 118
Score = 35.4 bits (80), Expect = 0.080, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Query: 213 QRLNLEDNILEGSIPDDICRLAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTS 272
QRL L +N + P L L +L SNKL F L L L L N L S
Sbjct: 36 QRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKS 95
Query: 273 IPL-TFWNLKDILQLNFSSN 291
IP F NLK + + +N
Sbjct: 96 IPRGAFDNLKSLTHIYLYNN 115
Score = 31.2 bits (69), Expect = 1.7, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 30/111 (27%)
Query: 248 GSIPACFGNLASLRILSLGSNKLTSI-PLTFWNLKDILQLNFSSNFLTGPLLLEIGNLKV 306
S+PA G + L L +N++T + P F +L ++ QL F+SN LT
Sbjct: 25 ASVPA--GIPTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTA----------- 71
Query: 307 LIGIDFSMNNFSGVIPREIGEKLSYLEDLNLSFNKLKGEIPRGGSFGNFSA 357
IP + +KL+ L L+L+ N LK IPR G+F N +
Sbjct: 72 --------------IPTGVFDKLTQLTQLDLNDNHLK-SIPR-GAFDNLKS 106
Score = 30.4 bits (67), Expect = 3.0, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Query: 165 EEFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEG 224
+ ++ N I+ P +L NL ++ NKL KL +L +L+L DN L+
Sbjct: 36 QRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLK- 94
Query: 225 SIP----DDICRLAELY 237
SIP D++ L +Y
Sbjct: 95 SIPRGAFDNLKSLTHIY 111
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 60/130 (46%), Gaps = 11/130 (8%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +++ + H N+I + N L+LE + G L +L + + + + +
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEE-EATSFIKQ 123
Query: 531 VASALEYLHFGYSALVIHCDLKPSNV-LLDDNM-VAHLS--DFSIAKLLTGEDQSMTQTQ 586
+ + YLH + + H DLKP N+ LLD N+ + H+ DF +A + + +
Sbjct: 124 ILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKN 177
Query: 587 TLGTIGYMAP 596
GT ++AP
Sbjct: 178 IFGTPEFVAP 187
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 7/69 (10%)
Query: 528 MIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQT 587
M+ ++ LH+ +H D+KP NVLLD N L+DF + L +D ++ +
Sbjct: 200 MVLAIDSIHQLHY------VHRDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVA 252
Query: 588 LGTIGYMAP 596
+GT Y++P
Sbjct: 253 VGTPDYISP 261
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/147 (19%), Positives = 66/147 (44%), Gaps = 12/147 (8%)
Query: 459 ALFIRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYS---- 514
A +R F E +MK ++++++ S + +++E M G L+ YL S
Sbjct: 53 AASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE 112
Query: 515 --SNCIL---DIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDF 569
+N +L + + + + ++A + YL+ + +H DL N ++ ++ + DF
Sbjct: 113 MENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDF 169
Query: 570 SIAKLLTGEDQSMTQTQTLGTIGYMAP 596
+ + + D + L + +M+P
Sbjct: 170 GMTRDIYETDYYRKGGKGLLPVRWMSP 196
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 57/127 (44%), Gaps = 6/127 (4%)
Query: 470 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 529
E + KS+ + +++ +++F +VLE SL + + + R M
Sbjct: 91 TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY-FMR 149
Query: 530 DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLG 589
++YLH + VIH DLK N+ L+D+M + DF +A + E + G
Sbjct: 150 QTIQGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI--EFDGERKKXLCG 204
Query: 590 TIGYMAP 596
T Y+AP
Sbjct: 205 TPNYIAP 211
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 63/134 (47%), Gaps = 8/134 (5%)
Query: 465 FKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQR 524
+ + VE +++ S H N++K++ + E +++E+ G+++ + L Q
Sbjct: 51 LEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQI 110
Query: 525 LNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 584
+ AL YLH +IH DLK N+L + L+DF ++ T ++ Q
Sbjct: 111 QVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNT---RTXIQ 164
Query: 585 TQT--LGTIGYMAP 596
+ +GT +MAP
Sbjct: 165 RRDSFIGTPYWMAP 178
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 60/130 (46%), Gaps = 11/130 (8%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +++ + H N+I + N L+LE + G L +L + + + + +
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEE-EATSFIKQ 123
Query: 531 VASALEYLHFGYSALVIHCDLKPSNV-LLDDNM-VAHLS--DFSIAKLLTGEDQSMTQTQ 586
+ + YLH + + H DLKP N+ LLD N+ + H+ DF +A + + +
Sbjct: 124 ILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKN 177
Query: 587 TLGTIGYMAP 596
GT ++AP
Sbjct: 178 IFGTPEFVAP 187
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 60/130 (46%), Gaps = 11/130 (8%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +++ + H N+I + N L+LE + G L +L + + + + +
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEE-EATSFIKQ 123
Query: 531 VASALEYLHFGYSALVIHCDLKPSNV-LLDDNM-VAHLS--DFSIAKLLTGEDQSMTQTQ 586
+ + YLH + + H DLKP N+ LLD N+ + H+ DF +A + + +
Sbjct: 124 ILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDGVEFKN 177
Query: 587 TLGTIGYMAP 596
GT ++AP
Sbjct: 178 IFGTPEFVAP 187
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 7/69 (10%)
Query: 528 MIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQT 587
M+ ++ LH+ +H D+KP NVLLD N L+DF + L +D ++ +
Sbjct: 184 MVLAIDSIHQLHY------VHRDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVA 236
Query: 588 LGTIGYMAP 596
+GT Y++P
Sbjct: 237 VGTPDYISP 245
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 56/128 (43%), Gaps = 19/128 (14%)
Query: 476 KSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL-----YSSNCILDIFQRLNIMID 530
+S+RH N+++ A+V+EY G L + + +S + FQ+L
Sbjct: 69 RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL----- 123
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLS--DFSIAKLLTGEDQSMTQTQTL 588
S + Y H + V H DLK N LLD + L DF +K Q + T+
Sbjct: 124 -ISGVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS---TV 176
Query: 589 GTIGYMAP 596
GT Y+AP
Sbjct: 177 GTPAYIAP 184
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 16/132 (12%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLN---I 527
E ++K + H N++K+ ++ LV+E G L + + F ++ I
Sbjct: 71 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGEL----FDEIILRQKFSEVDAAVI 126
Query: 528 MIDVASALEYLHFGYSALVIHCDLKPSNVLLDD---NMVAHLSDFSIAKLLTGEDQSMTQ 584
M V S YLH ++H DLKP N+LL+ + + + DF ++ +
Sbjct: 127 MKQVLSGTTYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF---EVGGKM 180
Query: 585 TQTLGTIGYMAP 596
+ LGT Y+AP
Sbjct: 181 KERLGTAYYIAP 192
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 9/120 (7%)
Query: 480 HRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 539
H N++K+ ++ LV+E + G L + + + + IM + SA+ ++H
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSET-EASYIMRKLVSAVSHMH 123
Query: 540 FGYSALVIHCDLKPSNVLL---DDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
V+H DLKP N+L +DN+ + DF A+L ++Q + T+ Y AP
Sbjct: 124 ---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPL--KTPCFTLHYAAP 178
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 20/166 (12%)
Query: 440 LCRATDEFSENNLIGRG---GFALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSN 492
+C A D E N+ + F A +++ E +MK + H+N+I +++ S
Sbjct: 45 VCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSL 103
Query: 493 EEFKA--LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCD 550
EEF+ +V+E M +L + + LD + ++ + +++LH SA +IH D
Sbjct: 104 EEFQDVYIVMELM-DANLCQVIQME---LDHERMSYLLYQMLCGIKHLH---SAGIIHRD 156
Query: 551 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
LKPSN+++ + + DF +A+ S T + T Y AP
Sbjct: 157 LKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAP 199
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 56/128 (43%), Gaps = 19/128 (14%)
Query: 476 KSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL-----YSSNCILDIFQRLNIMID 530
+S+RH N+++ A+V+EY G L + + +S + FQ+L
Sbjct: 70 RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL----- 124
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHL--SDFSIAKLLTGEDQSMTQTQTL 588
S + Y H + V H DLK N LLD + L +DF +K Q + +
Sbjct: 125 -ISGVSYAH---AMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKS---AV 177
Query: 589 GTIGYMAP 596
GT Y+AP
Sbjct: 178 GTPAYIAP 185
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 72/143 (50%), Gaps = 17/143 (11%)
Query: 440 LCRATDEFSENNLIGRG---GFALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSN 492
+C A D E N+ + F A +++ E +MK + H+N+I +++ S
Sbjct: 42 VCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSL 100
Query: 493 EEFKA--LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCD 550
EEF+ +V+E M +L + + LD + ++ + +++LH SA +IH D
Sbjct: 101 EEFQDVYIVMELM-DANLCQVIQME---LDHERMSYLLYQMLCGIKHLH---SAGIIHRD 153
Query: 551 LKPSNVLLDDNMVAHLSDFSIAK 573
LKPSN+++ + + DF +A+
Sbjct: 154 LKPSNIVVKSDCTLKILDFGLAR 176
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 20/166 (12%)
Query: 440 LCRATDEFSENNLIGRG---GFALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSN 492
+C A D E N+ + F A +++ E +MK + H+N+I +++ S
Sbjct: 40 VCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSL 98
Query: 493 EEFKA--LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCD 550
EEF+ +V+E M +L + + LD + ++ + +++LH SA +IH D
Sbjct: 99 EEFQDVYIVMELM-DANLCQVIQME---LDHERMSYLLYQMLCGIKHLH---SAGIIHRD 151
Query: 551 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
LKPSN+++ + + DF +A+ S T + T Y AP
Sbjct: 152 LKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAP 194
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/135 (19%), Positives = 62/135 (45%), Gaps = 12/135 (8%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYS------SNCIL---DI 521
E +MK ++++++ S + +++E M G L+ YL S +N +L +
Sbjct: 100 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 159
Query: 522 FQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQS 581
+ + + ++A + YL+ + +H DL N ++ ++ + DF + + + D
Sbjct: 160 SKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 216
Query: 582 MTQTQTLGTIGYMAP 596
+ L + +M+P
Sbjct: 217 RKGGKGLLPVRWMSP 231
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 70/140 (50%), Gaps = 20/140 (14%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSN----EEFKA--LVLEYMPHGSLEKYLYSSN 516
RA++ E +MK + H+N+I +++ + EEF+ LV+E M +L + +
Sbjct: 63 RAYR----ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME- 116
Query: 517 CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT 576
LD + ++ + +++LH SA +IH DLKPSN+++ + + DF +A+
Sbjct: 117 --LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--- 168
Query: 577 GEDQSMTQTQTLGTIGYMAP 596
S T + T Y AP
Sbjct: 169 TAGTSFMMTPYVVTRYYRAP 188
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 20/166 (12%)
Query: 440 LCRATDEFSENNLIGRG---GFALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSN 492
+C A D E N+ + F A +++ E +MK + H+N+I +++ S
Sbjct: 41 VCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSL 99
Query: 493 EEFKA--LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCD 550
EEF+ +V+E M +L + + LD + ++ + +++LH SA +IH D
Sbjct: 100 EEFQDVYIVMELM-DANLCQVIQME---LDHERMSYLLYQMLCGIKHLH---SAGIIHRD 152
Query: 551 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
LKPSN+++ + + DF +A+ S T + T Y AP
Sbjct: 153 LKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAP 195
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 10/96 (10%)
Query: 482 NLIKVISSCSNEEFK--ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 539
N+IK+I + + K ALV EY+ + K LY IL F M ++ AL+Y H
Sbjct: 99 NIIKLIDTVKDPVSKTPALVFEYINNTDF-KQLYQ---ILTDFDIRFYMYELLKALDYCH 154
Query: 540 FGYSALVIHCDLKPSNVLLDDNMVA-HLSDFSIAKL 574
S ++H D+KP NV++D L D+ +A+
Sbjct: 155 ---SKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEF 187
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 70/140 (50%), Gaps = 20/140 (14%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSN----EEFKA--LVLEYMPHGSLEKYLYSSN 516
RA++ E +MK + H+N+I +++ + EEF+ LV+E M +L + +
Sbjct: 62 RAYR----ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME- 115
Query: 517 CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT 576
LD + ++ + +++LH SA +IH DLKPSN+++ + + DF +A+
Sbjct: 116 --LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--- 167
Query: 577 GEDQSMTQTQTLGTIGYMAP 596
S T + T Y AP
Sbjct: 168 TAGTSFMMTPYVVTRYYRAP 187
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 16/144 (11%)
Query: 458 FALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSNEEFKALVL-EYMPHGSLEKYL 512
F I A +++ E ++K ++H N+I ++ + S EEF + L ++ L +
Sbjct: 59 FQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 513 YSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIA 572
D Q L + + L+Y+H SA +IH DLKPSN+ ++++ + F +A
Sbjct: 118 KCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILGFGLA 172
Query: 573 KLLTGEDQSMTQTQTLGTIGYMAP 596
+ E T + T Y AP
Sbjct: 173 RHTDDE-----MTGYVATRWYRAP 191
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 70/140 (50%), Gaps = 20/140 (14%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSN----EEFKA--LVLEYMPHGSLEKYLYSSN 516
RA++ E +MK + H+N+I +++ + EEF+ LV+E M +L + +
Sbjct: 63 RAYR----ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME- 116
Query: 517 CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT 576
LD + ++ + +++LH SA +IH DLKPSN+++ + + DF +A+
Sbjct: 117 --LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--- 168
Query: 577 GEDQSMTQTQTLGTIGYMAP 596
S T + T Y AP
Sbjct: 169 TAGTSFMMTPYVVTRYYRAP 188
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/135 (19%), Positives = 62/135 (45%), Gaps = 12/135 (8%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYS------SNCIL---DI 521
E +MK ++++++ S + +++E M G L+ YL S +N +L +
Sbjct: 72 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 131
Query: 522 FQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQS 581
+ + + ++A + YL+ + +H DL N ++ ++ + DF + + + D
Sbjct: 132 SKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 188
Query: 582 MTQTQTLGTIGYMAP 596
+ L + +M+P
Sbjct: 189 RKGGKGLLPVRWMSP 203
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 61/126 (48%), Gaps = 7/126 (5%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +M+ +H N++++ S E +++E++ G+L + S L+ Q +
Sbjct: 92 EVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIV--SQVRLNEEQIATVCEA 149
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
V AL YLH + VIH D+K ++LL + LSDF ++ + + +GT
Sbjct: 150 VLQALAYLH---AQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKD--VPKRKXLVGT 204
Query: 591 IGYMAP 596
+MAP
Sbjct: 205 PYWMAP 210
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 70/140 (50%), Gaps = 20/140 (14%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSN----EEFKA--LVLEYMPHGSLEKYLYSSN 516
RA++ E +MK + H+N+I +++ + EEF+ LV+E M +L + +
Sbjct: 70 RAYR----ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME- 123
Query: 517 CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT 576
LD + ++ + +++LH SA +IH DLKPSN+++ + + DF +A+
Sbjct: 124 --LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--- 175
Query: 577 GEDQSMTQTQTLGTIGYMAP 596
S T + T Y AP
Sbjct: 176 TAGTSFMMTPYVVTRYYRAP 195
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 70/140 (50%), Gaps = 20/140 (14%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSN----EEFKA--LVLEYMPHGSLEKYLYSSN 516
RA++ E +MK + H+N+I +++ + EEF+ LV+E M +L + +
Sbjct: 70 RAYR----ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME- 123
Query: 517 CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT 576
LD + ++ + +++LH SA +IH DLKPSN+++ + + DF +A+
Sbjct: 124 --LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--- 175
Query: 577 GEDQSMTQTQTLGTIGYMAP 596
S T + T Y AP
Sbjct: 176 TAGTSFMMTPYVVTRYYRAP 195
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 70/140 (50%), Gaps = 20/140 (14%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSN----EEFKA--LVLEYMPHGSLEKYLYSSN 516
RA++ E +MK + H+N+I +++ + EEF+ LV+E M +L + +
Sbjct: 68 RAYR----ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME- 121
Query: 517 CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT 576
LD + ++ + +++LH SA +IH DLKPSN+++ + + DF +A+
Sbjct: 122 --LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--- 173
Query: 577 GEDQSMTQTQTLGTIGYMAP 596
S T + T Y AP
Sbjct: 174 TAGTSFMMTPYVVTRYYRAP 193
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/135 (19%), Positives = 62/135 (45%), Gaps = 12/135 (8%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYS------SNCIL---DI 521
E +MK ++++++ S + +++E M G L+ YL S +N +L +
Sbjct: 69 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 128
Query: 522 FQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQS 581
+ + + ++A + YL+ + +H DL N ++ ++ + DF + + + D
Sbjct: 129 SKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 185
Query: 582 MTQTQTLGTIGYMAP 596
+ L + +M+P
Sbjct: 186 RKGGKGLLPVRWMSP 200
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 20/166 (12%)
Query: 440 LCRATDEFSENNLIGRG---GFALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSN 492
+C A D E N+ + F A +++ E +MK + H+N+I +++ S
Sbjct: 40 VCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSL 98
Query: 493 EEFKA--LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCD 550
EEF+ +V+E M +L + + LD + ++ + +++LH SA +IH D
Sbjct: 99 EEFQDVYIVMELM-DANLCQVIQME---LDHERMSYLLYQMLCGIKHLH---SAGIIHRD 151
Query: 551 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
LKPSN+++ + + DF +A+ S T + T Y AP
Sbjct: 152 LKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVTRYYRAP 194
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 10/96 (10%)
Query: 482 NLIKVISSCSNEEFK--ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 539
N+IK+I + + K ALV EY+ + K LY IL F M ++ AL+Y H
Sbjct: 94 NIIKLIDTVKDPVSKTPALVFEYINNTDF-KQLYQ---ILTDFDIRFYMYELLKALDYCH 149
Query: 540 FGYSALVIHCDLKPSNVLLDDNMVA-HLSDFSIAKL 574
S ++H D+KP NV++D L D+ +A+
Sbjct: 150 ---SKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEF 182
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 70/140 (50%), Gaps = 20/140 (14%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSN----EEFKA--LVLEYMPHGSLEKYLYSSN 516
RA++ E +MK + H+N+I +++ + EEF+ LV+E M +L + +
Sbjct: 69 RAYR----ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME- 122
Query: 517 CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT 576
LD + ++ + +++LH SA +IH DLKPSN+++ + + DF +A+
Sbjct: 123 --LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--- 174
Query: 577 GEDQSMTQTQTLGTIGYMAP 596
S T + T Y AP
Sbjct: 175 TAGTSFMMTPYVVTRYYRAP 194
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 70/140 (50%), Gaps = 20/140 (14%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSN----EEFKA--LVLEYMPHGSLEKYLYSSN 516
RA++ E +MK + H+N+I +++ + EEF+ LV+E M +L + +
Sbjct: 69 RAYR----ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME- 122
Query: 517 CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT 576
LD + ++ + +++LH SA +IH DLKPSN+++ + + DF +A+
Sbjct: 123 --LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--- 174
Query: 577 GEDQSMTQTQTLGTIGYMAP 596
S T + T Y AP
Sbjct: 175 TAGTSFMMTPYVVTRYYRAP 194
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 29/147 (19%), Positives = 66/147 (44%), Gaps = 12/147 (8%)
Query: 459 ALFIRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYS---- 514
A +R F E +MK ++++++ S + +++E M G L+ YL S
Sbjct: 59 AASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE 118
Query: 515 --SNCIL---DIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDF 569
+N +L + + + + ++A + YL+ + +H DL N ++ ++ + DF
Sbjct: 119 MENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDF 175
Query: 570 SIAKLLTGEDQSMTQTQTLGTIGYMAP 596
+ + + D + L + +M+P
Sbjct: 176 GMTRDIYETDYYRKGGKGLLPVRWMSP 202
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 10/74 (13%)
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLL---DDNMVAHLSDFSIAKLLTGEDQSM 582
IM D+ +A+++LH S + H D+KP N+L + + V L+DF AK T Q+
Sbjct: 132 EIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT---QNA 185
Query: 583 TQTQTLGTIGYMAP 596
QT T Y+AP
Sbjct: 186 LQTPCY-TPYYVAP 198
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 20/166 (12%)
Query: 440 LCRATDEFSENNLIGRG---GFALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSN 492
+C A D E N+ + F A +++ E +MK + H+N+I +++ S
Sbjct: 34 VCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSL 92
Query: 493 EEFKA--LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCD 550
EEF+ +V+E M +L + + LD + ++ + +++LH SA +IH D
Sbjct: 93 EEFQDVYIVMELM-DANLCQVIQME---LDHERMSYLLYQMLCGIKHLH---SAGIIHRD 145
Query: 551 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
LKPSN+++ + + DF +A+ S T + T Y AP
Sbjct: 146 LKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAP 188
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/135 (19%), Positives = 62/135 (45%), Gaps = 12/135 (8%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYS------SNCIL---DI 521
E +MK ++++++ S + +++E M G L+ YL S +N +L +
Sbjct: 68 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSL 127
Query: 522 FQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQS 581
+ + + ++A + YL+ + +H DL N ++ ++ + DF + + + D
Sbjct: 128 SKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 184
Query: 582 MTQTQTLGTIGYMAP 596
+ L + +M+P
Sbjct: 185 RKGGKGLLPVRWMSP 199
>pdb|1H6U|A Chain A, Internalin H: Crystal Structure Of Fused N-Terminal
Domains
Length = 308
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 102/234 (43%), Gaps = 33/234 (14%)
Query: 58 LPNLEKLYLWGNNFSGTIPRFIFNA-SKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDE 116
L N K+ +N + T+ + + + LS G+ + G L NL L L +
Sbjct: 18 LANAIKIAAGKSNVTDTVTQADLDGITTLSAFGTGVTTIEGV-----QYLNNLIGLELKD 72
Query: 117 NYLTSSTP---------------ELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLS 161
N +T P L +S+++ +S+ +DL++ + + P +SN
Sbjct: 73 NQITDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSN-- 130
Query: 162 RSLEEFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNI 221
L+ Y+ I+ P ++ LTNL + +G +++ P L L KL L +DN
Sbjct: 131 --LQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNK 184
Query: 222 LEGSIPDDICRLAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSIPL 275
+ P + L L + L +N++ P N ++L I++L + +T+ P+
Sbjct: 185 ISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITNQPV 234
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 10/74 (13%)
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLL---DDNMVAHLSDFSIAKLLTGEDQSM 582
IM D+ +A+++LH S + H D+KP N+L + + V L+DF AK T Q+
Sbjct: 113 EIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT---QNA 166
Query: 583 TQTQTLGTIGYMAP 596
QT T Y+AP
Sbjct: 167 LQTPCY-TPYYVAP 179
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 16/144 (11%)
Query: 458 FALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSNEEFKALVL-EYMPHGSLEKYL 512
F I A +++ E ++K ++H N+I ++ + S EEF + L ++ L +
Sbjct: 59 FQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 513 YSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIA 572
D Q L + + L+Y+H SA +IH DLKPSN+ ++++ + D +A
Sbjct: 118 KCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDAGLA 172
Query: 573 KLLTGEDQSMTQTQTLGTIGYMAP 596
+ E T + T Y AP
Sbjct: 173 RHTDDE-----MTGYVATRWYRAP 191
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 70/140 (50%), Gaps = 20/140 (14%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSN----EEFKA--LVLEYMPHGSLEKYLYSSN 516
RA++ E +MK + H+N+I +++ + EEF+ LV+E M +L + +
Sbjct: 107 RAYR----ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME- 160
Query: 517 CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT 576
LD + ++ + +++LH SA +IH DLKPSN+++ + + DF +A+
Sbjct: 161 --LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 215
Query: 577 GEDQSMTQTQTLGTIGYMAP 596
S T + T Y AP
Sbjct: 216 T---SFMMTPYVVTRYYRAP 232
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 16/144 (11%)
Query: 458 FALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSNEEFKALVL-EYMPHGSLEKYL 512
F I A +++ E ++K ++H N+I ++ + S EEF + L ++ L +
Sbjct: 59 FQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 513 YSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIA 572
D Q L + + L+Y+H SA +IH DLKPSN+ ++++ + D +A
Sbjct: 118 KCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDRGLA 172
Query: 573 KLLTGEDQSMTQTQTLGTIGYMAP 596
+ E T + T Y AP
Sbjct: 173 RHTDDE-----MTGYVATRWYRAP 191
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 70/140 (50%), Gaps = 20/140 (14%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSN----EEFKA--LVLEYMPHGSLEKYLYSSN 516
RA++ E +MK + H+N+I +++ + EEF+ LV+E M +L + +
Sbjct: 107 RAYR----ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME- 160
Query: 517 CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT 576
LD + ++ + +++LH SA +IH DLKPSN+++ + + DF +A+
Sbjct: 161 --LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 215
Query: 577 GEDQSMTQTQTLGTIGYMAP 596
S T + T Y AP
Sbjct: 216 T---SFMMTPYVVTRYYRAP 232
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 26/135 (19%), Positives = 62/135 (45%), Gaps = 12/135 (8%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYS------SNCIL---DI 521
E +MK ++++++ S + +++E M G L+ YL S +N +L +
Sbjct: 78 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSL 137
Query: 522 FQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQS 581
+ + + ++A + YL+ + +H DL N ++ ++ + DF + + + D
Sbjct: 138 SKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 194
Query: 582 MTQTQTLGTIGYMAP 596
+ L + +M+P
Sbjct: 195 RKGGKGLLPVRWMSP 209
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 29/147 (19%), Positives = 66/147 (44%), Gaps = 12/147 (8%)
Query: 459 ALFIRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYS---- 514
A +R F E +MK ++++++ S + +++E M G L+ YL S
Sbjct: 66 AASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE 125
Query: 515 --SNCIL---DIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDF 569
+N +L + + + + ++A + YL+ + +H DL N ++ ++ + DF
Sbjct: 126 MENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDF 182
Query: 570 SIAKLLTGEDQSMTQTQTLGTIGYMAP 596
+ + + D + L + +M+P
Sbjct: 183 GMTRDIYETDYYRKGGKGLLPVRWMSP 209
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 55/129 (42%), Gaps = 15/129 (11%)
Query: 480 HRNLIKVISSCSNEEFKALVL-EYMPHGSLEKYLYSS-----------NCILDIFQRLNI 527
H N++ ++ +C+ +V+ E+ G+L YL S L + +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXY 149
Query: 528 MIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQT 587
VA +E+L S IH DL N+LL + V + DF +A+ + + + +
Sbjct: 150 SFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDA 206
Query: 588 LGTIGYMAP 596
+ +MAP
Sbjct: 207 RLPLKWMAP 215
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 36.2 bits (82), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 26/135 (19%), Positives = 62/135 (45%), Gaps = 12/135 (8%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYS------SNCIL---DI 521
E +MK ++++++ S + +++E M G L+ YL S +N +L +
Sbjct: 71 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 130
Query: 522 FQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQS 581
+ + + ++A + YL+ + +H DL N ++ ++ + DF + + + D
Sbjct: 131 SKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 187
Query: 582 MTQTQTLGTIGYMAP 596
+ L + +M+P
Sbjct: 188 RKGGKGLLPVRWMSP 202
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 36.2 bits (82), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 498 LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVL 557
LV + MP+G L ++ + L LN + +A + YL ++H DL NVL
Sbjct: 95 LVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLE---DVRLVHRDLAARNVL 151
Query: 558 LDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMA 595
+ ++DF +A+LL ++ I +MA
Sbjct: 152 VKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMA 189
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 36.2 bits (82), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 58/129 (44%), Gaps = 10/129 (7%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 530
E +++K + H N+ K+ ++ + LV E G L + S ++ I+
Sbjct: 76 EVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQ 134
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLD---DNMVAHLSDFSIAKLLTGEDQSMTQTQT 587
V S + Y H ++H DLKP N+LL+ + + DF ++ T + S
Sbjct: 135 VLSGITYXH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS---THFEASKKXKDK 188
Query: 588 LGTIGYMAP 596
+GT Y+AP
Sbjct: 189 IGTAYYIAP 197
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 527 IMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQ 586
I ++ L +LH VIH D+K NVLL +N L DF ++ L D+++ +
Sbjct: 134 ICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL---DRTVGRRN 187
Query: 587 T-LGTIGYMAP 596
T +GT +MAP
Sbjct: 188 TFIGTPYWMAP 198
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 61/137 (44%), Gaps = 26/137 (18%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLN---- 526
E ++K + H N++K+ ++ LV+E G L +I R+
Sbjct: 86 EVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGEL---------FDEIIHRMKFNEV 136
Query: 527 ----IMIDVASALEYLHFGYSALVIHCDLKPSNVLL---DDNMVAHLSDFSIAKLLTGED 579
I+ V S + YLH ++H DLKP N+LL + + + + DF ++ + +
Sbjct: 137 DAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK 193
Query: 580 QSMTQTQTLGTIGYMAP 596
+ + LGT Y+AP
Sbjct: 194 K---MKERLGTAYYIAP 207
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 35.8 bits (81), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 16/144 (11%)
Query: 458 FALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSNEEFKALVL-EYMPHGSLEKYL 512
F I A +++ E ++K ++H N+I ++ + S EEF + L ++ L +
Sbjct: 59 FQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 513 YSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIA 572
D Q L + + L+Y+H SA +IH DLKPSN+ ++++ + D +A
Sbjct: 118 KCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDGGLA 172
Query: 573 KLLTGEDQSMTQTQTLGTIGYMAP 596
+ E T + T Y AP
Sbjct: 173 RHTDDE-----MTGYVATRWYRAP 191
>pdb|3J0A|A Chain A, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
pdb|3J0A|B Chain B, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
Length = 844
Score = 35.8 bits (81), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 99/212 (46%), Gaps = 29/212 (13%)
Query: 66 LWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPE 125
L+ +NF G +P K++ + L N + TF L L+ L L +N LT+
Sbjct: 329 LYSSNFYG-LP-------KVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTT---- 376
Query: 126 LSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCNISGGIPEEISNL 185
+ F+ S+ + I LS N L LPK +++ L E + N +I + + +L
Sbjct: 377 IHFIPSIPD------IFLSGNKL-VTLPKINLTANLIHLSENRLENLDILYFLLR-VPHL 428
Query: 186 TNLVEIDLGGNKLNG-SIPITLGKLRKLQRLNLEDNILEGSIPDDICR-----LAELYRL 239
L+ L N+ + S T + L++L L +N+L+ + ++C L+ L L
Sbjct: 429 QILI---LNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVL 485
Query: 240 ELGSNKLYGSIPACFGNLASLRILSLGSNKLT 271
L N L P F +L +LR LSL SN+LT
Sbjct: 486 YLNHNYLNSLPPGVFSHLTALRGLSLNSNRLT 517
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 254 FGNLASLRILSLGSNKLTSI-PLTFWNLKDILQLNFSSNFLTGPLLLE--IGNLKVLIGI 310
F NL +LRIL LGS+K+ + P F L + +L L+ +L + NLK L +
Sbjct: 69 FRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRL 128
Query: 311 DFSMNNFSGVIPREIGEKLSYLEDLNLSFNKL 342
D S N + KL+ L+ ++ S N++
Sbjct: 129 DLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQI 160
Score = 29.3 bits (64), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 39/89 (43%)
Query: 185 LTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSN 244
L +L ++L NK+N L LQ LNL N+L + L ++ ++L N
Sbjct: 289 LKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKN 348
Query: 245 KLYGSIPACFGNLASLRILSLGSNKLTSI 273
+ F L L+ L L N LT+I
Sbjct: 349 HIAIIQDQTFKFLEKLQTLDLRDNALTTI 377
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 35.8 bits (81), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 60/130 (46%), Gaps = 18/130 (13%)
Query: 456 GGFALFIRAFKSFDVECEMMKSIR----------HRNLIKVIS--SCSNEEFKALVLEYM 503
G + F +F + ++ R H N++ +++ N+ LV +YM
Sbjct: 34 GEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYM 93
Query: 504 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMV 563
L + ++ IL+ + ++ + ++YLH G ++H D+KPSN+LL+
Sbjct: 94 -ETDLHAVIRAN--ILEPVHKQYVVYQLIKVIKYLHSGG---LLHRDMKPSNILLNAECH 147
Query: 564 AHLSDFSIAK 573
++DF +++
Sbjct: 148 VKVADFGLSR 157
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 81/166 (48%), Gaps = 20/166 (12%)
Query: 440 LCRATDEFSENNLIGRG---GFALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSN 492
+C A D E N+ + F A +++ E +MK + H+N+I +++ S
Sbjct: 40 VCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSL 98
Query: 493 EEFKA--LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCD 550
EEF+ +V+E M +L + + LD + ++ + +++LH SA +IH D
Sbjct: 99 EEFQDVYIVMELM-DANLCQVIQME---LDHERMSYLLYQMLCGIKHLH---SAGIIHRD 151
Query: 551 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
LKPSN+++ + + DF +A+ T M + + + T Y AP
Sbjct: 152 LKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMEPEVV-TRYYRAP 194
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 35.8 bits (81), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 6/117 (5%)
Query: 480 HRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 539
H L+ + S E V+EY+ G L ++ + + R +++ AL YLH
Sbjct: 69 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH 127
Query: 540 FGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
+I+ DLK NVLLD L+D+ + K G T + GT Y+AP
Sbjct: 128 ---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAP 179
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 81/166 (48%), Gaps = 20/166 (12%)
Query: 440 LCRATDEFSENNLIGRG---GFALFIRAFKSFDVECEMMKSIRHRNLIKVIS----SCSN 492
+C A D E N+ + F A +++ E +MK + H+N+I +++ S
Sbjct: 40 VCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSL 98
Query: 493 EEFKA--LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCD 550
EEF+ +V+E M +L + + LD + ++ + +++LH SA +IH D
Sbjct: 99 EEFQDVYIVMELM-DANLCQVIQME---LDHERMSYLLYQMLCGIKHLH---SAGIIHRD 151
Query: 551 LKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
LKPSN+++ + + DF +A+ T M + + + T Y AP
Sbjct: 152 LKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMEPEVV-TRYYRAP 194
>pdb|3TWI|D Chain D, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
pdb|3TWI|E Chain E, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
pdb|3TWI|F Chain F, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
Length = 179
Score = 35.8 bits (81), Expect = 0.072, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Query: 64 LYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTSST 123
L+L+ N + P + ++L+ L+L +N + F L L L L N L S
Sbjct: 45 LHLYINQITKLEPGVFDSLTQLTYLNLAVNQLTALPVGVFDKLTKLTHLALHINQL-KSI 103
Query: 124 PELSFLSSLSNCKSLTLIDLSNNPLD 149
P + N KSLT I L NNP D
Sbjct: 104 P----MGVFDNLKSLTHIYLFNNPWD 125
Score = 29.6 bits (65), Expect = 4.4, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Query: 213 QRLNLEDNILEGSIPDDICRLAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTS 272
Q L+L N + P L +L L L N+L F L L L+L N+L S
Sbjct: 43 QVLHLYINQITKLEPGVFDSLTQLTYLNLAVNQLTALPVGVFDKLTKLTHLALHINQLKS 102
Query: 273 IPL-TFWNLKDILQLNFSSN 291
IP+ F NLK + + +N
Sbjct: 103 IPMGVFDNLKSLTHIYLFNN 122
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 23/130 (17%)
Query: 476 KSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL-----YSSNCILDIFQRLNIMID 530
+S+RH N+++ A+V+EY G L + + +S + FQ+L
Sbjct: 70 RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL----- 124
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLS----DFSIAKLLTGEDQSMTQTQ 586
S + Y H + V H DLK N LLD + L +S + +L + +S
Sbjct: 125 -ISGVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKS----- 175
Query: 587 TLGTIGYMAP 596
T+GT Y+AP
Sbjct: 176 TVGTPAYIAP 185
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 57/129 (44%), Gaps = 15/129 (11%)
Query: 480 HRNLIKVISSCSNEEFKALVL-EYMPHGSLEKYLYSS-------NCILDIFQRLNIMI-- 529
H N++ ++ +C+ +V+ E+ G+L YL S + F L +I
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICY 149
Query: 530 --DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQT 587
VA +E+L S IH DL N+LL + V + DF +A+ + + + +
Sbjct: 150 SFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 206
Query: 588 LGTIGYMAP 596
+ +MAP
Sbjct: 207 RLPLKWMAP 215
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 35.8 bits (81), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 64/117 (54%), Gaps = 17/117 (14%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSN----EEFKA--LVLEYMPHGSLEKYLYSSN 516
RA++ E ++K + H+N+I +++ + EEF+ LV+E M +L + ++
Sbjct: 67 RAYR----ELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIHME- 120
Query: 517 CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAK 573
LD + ++ + +++LH SA +IH DLKPSN+++ + + DF +A+
Sbjct: 121 --LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 172
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 35.8 bits (81), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 64/117 (54%), Gaps = 17/117 (14%)
Query: 463 RAFKSFDVECEMMKSIRHRNLIKVISSCSN----EEFKA--LVLEYMPHGSLEKYLYSSN 516
RA++ E ++K + H+N+I +++ + EEF+ LV+E M +L + ++
Sbjct: 69 RAYR----ELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIHME- 122
Query: 517 CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAK 573
LD + ++ + +++LH SA +IH DLKPSN+++ + + DF +A+
Sbjct: 123 --LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 35.8 bits (81), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 16/132 (12%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLN---I 527
E ++K + H N++K+ ++ LV+E G L + + F ++ I
Sbjct: 54 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGEL----FDEIILRQKFSEVDAAVI 109
Query: 528 MIDVASALEYLHFGYSALVIHCDLKPSNVLLDD---NMVAHLSDFSIAKLLTGEDQSMTQ 584
M V S YLH ++H DLKP N+LL+ + + + DF ++ +
Sbjct: 110 MKQVLSGTTYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF---EVGGKM 163
Query: 585 TQTLGTIGYMAP 596
+ LGT Y+AP
Sbjct: 164 KERLGTAYYIAP 175
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 35.8 bits (81), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 9/74 (12%)
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDD---NMVAHLSDFSIAKLLTGEDQSM 582
IM + A++YLH S + H D+KP N+L N + L+DF AK T +
Sbjct: 119 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN--- 172
Query: 583 TQTQTLGTIGYMAP 596
+ T+ T Y+AP
Sbjct: 173 SLTEPCYTPYYVAP 186
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 35.4 bits (80), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 10/111 (9%)
Query: 474 MMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL-EKYLYSSNCILDIFQRLNIMIDVA 532
+++ +H N+I + + ++ +V E M G L +K L + ++ +
Sbjct: 69 LLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQK--FFSEREASAVLFTIT 126
Query: 533 SALEYLHFGYSALVIHCDLKPSNVLLDDNM----VAHLSDFSIAKLLTGED 579
+EYLH + V+H DLKPSN+L D + DF AK L E+
Sbjct: 127 KTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN 174
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 35.4 bits (80), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 538 LHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
LH + A V+H DL P N+LL DN + DF++A+ T + +T + Y AP
Sbjct: 147 LHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTAD---ANKTHYVTHRWYRAP 202
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 35.4 bits (80), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 76/177 (42%), Gaps = 22/177 (12%)
Query: 53 IANVRLPNLEKLYLWGN--NFSGTIPRFIFNASKLSKLSLGMNSFSGFIP--STFGNLRN 108
+ V LP+LE L L N +F G + F + L L L SF+G I S F L
Sbjct: 341 FSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDL---SFNGVITMSSNFLGLEQ 397
Query: 109 LEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNN----PLDGILPKTSISNLSRSL 164
LE L ++ S+ ++S S + ++L +D+S+ +GI S SL
Sbjct: 398 LEHL----DFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLS------SL 447
Query: 165 EEFYMY-NCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDN 220
E M N +P+ + L NL +DL +L P L LQ LN+ N
Sbjct: 448 EVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHN 504
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 60/144 (41%), Gaps = 17/144 (11%)
Query: 141 IDLSNNPLDGI-------LPKTSISNLSRSLEEFYMYNCNISGGIPEEISNLTNLVEIDL 193
+DLS NPL + P+ + +LSR + I G + +S+L+ L+ L
Sbjct: 33 LDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ------TIEDGAYQSLSHLSTLI---L 83
Query: 194 GGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKLYG-SIPA 252
GN + L LQ+L + L I L L L + N + +P
Sbjct: 84 TGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPE 143
Query: 253 CFGNLASLRILSLGSNKLTSIPLT 276
F NL +L L L SNK+ SI T
Sbjct: 144 YFSNLTNLEHLDLSSNKIQSIYCT 167
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Query: 175 SGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRL 215
S +PE SNLTNL +DL NK+ I LR L ++
Sbjct: 138 SFKLPEYFSNLTNLEHLDLSSNKIQS---IYCTDLRVLHQM 175
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 35.4 bits (80), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 538 LHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
LH + A V+H DL P N+LL DN + DF++A+ T + +T + Y AP
Sbjct: 147 LHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTAD---ANKTHYVTHRWYRAP 202
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 35.4 bits (80), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 19/141 (13%)
Query: 471 ECEMMKSIRHRNLIKVISSCSNEEFKA----LVLEYMPHGSLE---KYLYSSNCILDIFQ 523
E +M + H N++++++ C E L+L + G+L + L L Q
Sbjct: 76 EADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQ 135
Query: 524 RLNIMIDVASALEYLHF-GYSALVIHCDLKPSNVLLDDNMVAHLSDF----SIAKLLTGE 578
L +++ + LE +H GY+ H DLKP+N+LL D L D + G
Sbjct: 136 ILWLLLGICRGLEAIHAKGYA----HRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGS 191
Query: 579 DQSMTQTQTLG---TIGYMAP 596
Q++T TI Y AP
Sbjct: 192 RQALTLQDWAAQRCTISYRAP 212
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 35.4 bits (80), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 6/117 (5%)
Query: 480 HRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 539
H L+ + S E V+EY+ G L ++ + + R +++ AL YLH
Sbjct: 65 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH 123
Query: 540 FGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
+I+ DLK NVLLD L+D+ + K G T + GT Y+AP
Sbjct: 124 ---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAP 175
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 35.4 bits (80), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 6/117 (5%)
Query: 480 HRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 539
H L+ + S E V+EY+ G L ++ + + R +++ AL YLH
Sbjct: 112 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH 170
Query: 540 FGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
+I+ DLK NVLLD L+D+ + K G T + GT Y+AP
Sbjct: 171 ---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSTFCGTPNYIAP 222
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 35.4 bits (80), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 6/117 (5%)
Query: 480 HRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 539
H L+ + S E V+EY+ G L ++ + + R +++ AL YLH
Sbjct: 80 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH 138
Query: 540 FGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596
+I+ DLK NVLLD L+D+ + K G T + GT Y+AP
Sbjct: 139 ---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAP 190
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 35.4 bits (80), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 68/152 (44%), Gaps = 17/152 (11%)
Query: 459 ALFIRAFKSFDVECEMMKSI--RHRNLIKVISS----CSNEEFKALVLEYMPHGSLEKYL 512
F S+ E E+ +++ RH N++ I++ + L+ +Y +GSL YL
Sbjct: 67 VFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYL 126
Query: 513 YSSNCILDIFQRLNIMIDVASALEYLHF------GYSALVIHCDLKPSNVLLDDNMVAHL 566
S+ LD L + S L +LH G A+ H DLK N+L+ N +
Sbjct: 127 KSTT--LDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIA-HRDLKSKNILVKKNGTCCI 183
Query: 567 SDFSIA-KLLTGEDQ-SMTQTQTLGTIGYMAP 596
+D +A K ++ ++ + +GT YM P
Sbjct: 184 ADLGLAVKFISDTNEVDIPPNTRVGTKRYMPP 215
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 35.4 bits (80), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 61/132 (46%), Gaps = 8/132 (6%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+ +E + +S+ H++++ + +F +VLE SL + + + R
Sbjct: 62 EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY 121
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 585
+ + +YLH VIH DLK N+ L++++ + DF +A T + +
Sbjct: 122 YLR-QIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLA---TKVEYDGERK 174
Query: 586 QTL-GTIGYMAP 596
+TL GT Y+AP
Sbjct: 175 KTLCGTPNYIAP 186
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 35.4 bits (80), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 531 VASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGT 590
VA +E+L S IH DL N+LL +N V + DF +A+ + + + T
Sbjct: 208 VARGMEFLS---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLP 264
Query: 591 IGYMAP 596
+ +MAP
Sbjct: 265 LKWMAP 270
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 35.4 bits (80), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 61/132 (46%), Gaps = 8/132 (6%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+ +E + +S+ H++++ + +F +VLE SL + + + R
Sbjct: 62 EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY 121
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 585
+ + +YLH VIH DLK N+ L++++ + DF +A T + +
Sbjct: 122 YLR-QIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLA---TKVEYDGERK 174
Query: 586 QTL-GTIGYMAP 596
+TL GT Y+AP
Sbjct: 175 KTLCGTPNYIAP 186
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 35.4 bits (80), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 29/147 (19%), Positives = 65/147 (44%), Gaps = 12/147 (8%)
Query: 459 ALFIRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYS---- 514
A +R F E +MK ++++++ S + +++E M G L+ YL S
Sbjct: 53 AASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE 112
Query: 515 --SNCIL---DIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDF 569
+N +L + + + + ++A + YL+ + +H DL N + ++ + DF
Sbjct: 113 MENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCXVAEDFTVKIGDF 169
Query: 570 SIAKLLTGEDQSMTQTQTLGTIGYMAP 596
+ + + D + L + +M+P
Sbjct: 170 GMTRDIYETDYYRKGGKGLLPVRWMSP 196
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 35.4 bits (80), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 57/132 (43%), Gaps = 18/132 (13%)
Query: 480 HRNLIKVISSCSNEEFKALVL-EYMPHGSLEKYLYSSN----------CILDIFQRLNIM 528
H N++ ++ +C+ +V+ E+ G+L YL S + F L +
Sbjct: 91 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHL 150
Query: 529 I----DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 584
I VA +E+L S IH DL N+LL + V + DF +A+ + + + +
Sbjct: 151 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 585 TQTLGTIGYMAP 596
+ +MAP
Sbjct: 208 GDARLPLKWMAP 219
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 35.4 bits (80), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 61/132 (46%), Gaps = 8/132 (6%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+ +E + +S+ H++++ + +F +VLE SL + + + R
Sbjct: 66 EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY 125
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQT 585
+ + +YLH VIH DLK N+ L++++ + DF +A T + +
Sbjct: 126 YLR-QIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLA---TKVEYDGERK 178
Query: 586 QTL-GTIGYMAP 596
+TL GT Y+AP
Sbjct: 179 KTLCGTPNYIAP 190
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 57/133 (42%), Gaps = 19/133 (14%)
Query: 480 HRNLIKVISSCSNEEFKALVL-EYMPHGSLEKYLYSSN-----------CILDIFQRLNI 527
H N++ ++ +C+ +V+ E+ G+L YL S + F L
Sbjct: 81 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 528 MI----DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMT 583
+I VA +E+L S IH DL N+LL + V + DF +A+ + + +
Sbjct: 141 LICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 197
Query: 584 QTQTLGTIGYMAP 596
+ + +MAP
Sbjct: 198 KGDARLPLKWMAP 210
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/140 (20%), Positives = 57/140 (40%), Gaps = 25/140 (17%)
Query: 479 RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-------------------- 518
+H N++ ++ +C++ ++ EY +G L +L
Sbjct: 93 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDG 152
Query: 519 --LDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT 576
L++ L+ VA + +L S IH D+ NVLL + VA + DF +A+ +
Sbjct: 153 RPLELRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIM 209
Query: 577 GEDQSMTQTQTLGTIGYMAP 596
+ + + + +MAP
Sbjct: 210 NDSNYIVKGNARLPVKWMAP 229
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 61/140 (43%), Gaps = 13/140 (9%)
Query: 463 RAFKSFDVECE--MMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILD 520
R D+E E ++K I+H N+I + N+ L+ E + G L +L + +
Sbjct: 54 RGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTE 113
Query: 521 IFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVA----HLSDFSIAKLLT 576
+ + + + + YLH S + H DLKP N++L D V + DF +A +
Sbjct: 114 E-EATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI- 168
Query: 577 GEDQSMTQTQTLGTIGYMAP 596
D GT ++AP
Sbjct: 169 --DFGNEFKNIFGTPEFVAP 186
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 62/135 (45%), Gaps = 11/135 (8%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+ + E +++ + H N+I + N L+LE + G L +L + + +
Sbjct: 60 EEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE-EEAT 118
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNV-LLDDNM-VAHLS--DFSIAKLLTGEDQS 581
+ + + + YLH + + H DLKP N+ LLD N+ + H+ DF +A + +
Sbjct: 119 SFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI---EDG 172
Query: 582 MTQTQTLGTIGYMAP 596
+ GT ++AP
Sbjct: 173 VEFKNIFGTPEFVAP 187
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 61/131 (46%), Gaps = 8/131 (6%)
Query: 468 FDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNI 527
F E +++ + R + ++ + +E + LV+EY G L L +
Sbjct: 108 FREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFY 167
Query: 528 MIDVASALEYLH-FGYSALVIHCDLKPSNVLLDDNMVAHLSDF-SIAKLLTGEDQSMTQT 585
+ ++ A++ +H GY +H D+KP N+LLD L+DF S KL D ++
Sbjct: 168 LAEIVMAIDSVHRLGY----VHRDIKPDNILLDRCGHIRLADFGSCLKLRA--DGTVRSL 221
Query: 586 QTLGTIGYMAP 596
+GT Y++P
Sbjct: 222 VAVGTPDYLSP 232
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 57/133 (42%), Gaps = 19/133 (14%)
Query: 480 HRNLIKVISSCSNEEFKALVL-EYMPHGSLEKYLYSSN-----------CILDIFQRLNI 527
H N++ ++ +C+ +V+ E+ G+L YL S + F L
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 528 MI----DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMT 583
+I VA +E+L S IH DL N+LL + V + DF +A+ + + +
Sbjct: 141 LICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 197
Query: 584 QTQTLGTIGYMAP 596
+ + +MAP
Sbjct: 198 KGDARLPLKWMAP 210
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 60/120 (50%), Gaps = 21/120 (17%)
Query: 471 ECEMMKSIRHRNLIKV--------------ISSCSNEEFKALVLEYMPHGSLEKYLYSSN 516
E ++++ + H N++KV + S + +V EYM L L
Sbjct: 58 EIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYM-ETDLANVL-EQG 115
Query: 517 CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLD-DNMVAHLSDFSIAKLL 575
+L+ RL M + L+Y+H SA V+H DLKP+N+ ++ +++V + DF +A+++
Sbjct: 116 PLLEEHARL-FMYQLLRGLKYIH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIM 171
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Query: 527 IMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNM----VAHLSDFSIAKLLTGED 579
++ + +EYLH S V+H DLKPSN+L D + DF AK L E+
Sbjct: 126 VLHTIGKTVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAEN 179
>pdb|3O53|A Chain A, Crystal Structure Of Lrim1 Leucine-Rich Repeat Domain
pdb|3O53|B Chain B, Crystal Structure Of Lrim1 Leucine-Rich Repeat Domain
Length = 317
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 82/198 (41%), Gaps = 16/198 (8%)
Query: 187 NLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKL 246
N+ E+DL GN L+ L KL+ LNL N+L ++ D+ L+ L L+L +N +
Sbjct: 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETL--DLESLSTLRTLDLNNNYV 92
Query: 247 YGSIPACFGNLASLRILSLGSNKLTSIPLTFWNLKDILQLNFSSNFLTGPLLLEIGNLKV 306
+ S+ L +N ++ + + K + L ++N +T L+ G
Sbjct: 93 QELLVG-----PSIETLHAANNNISRVSCSRGQGKKNIYL--ANNKITMLRDLDEGCRSR 145
Query: 307 LIGIDFSMNNFSGVIPREIGEKLSYLEDLNLSFN---KLKGEIPRGGSFGNFSAESFEGN 363
+ +D +N V E+ LE LNL +N +KG++ F N
Sbjct: 146 VQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQVV----FAKLKTLDLSSN 201
Query: 364 ELLCGSPNLQVPPCKTSI 381
+L P Q T I
Sbjct: 202 KLAFMGPEFQSAAGVTWI 219
Score = 29.3 bits (64), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 115/300 (38%), Gaps = 54/300 (18%)
Query: 82 ASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLI 141
A + +L L N S + LE L L N L + L SLS ++L
Sbjct: 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD----LESLSTLRTL--- 85
Query: 142 DLSNNPLDGILPKTSISNLSRSLEEFYMYNCNISGG---IPEEISNLTNLVEIDLGGN-- 196
DL+NN + +L SI L + +C+ G I + +T L ++D G
Sbjct: 86 DLNNNYVQELLVGPSIETLHAANNNISRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSR 145
Query: 197 ------KLNGSIPITLGKLRK----LQRLNLEDNIL---EGSIPDDICRLAELYRLELGS 243
KLN + +L L+ LNL+ N + +G + A+L L+L S
Sbjct: 146 VQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQVV-----FAKLKTLDLSS 200
Query: 244 NKLYGSIPACFGNLASLRILSLGSNKLTSIPLTFWNLKDILQLNFSSNFLTGPLL---LE 300
NKL P F + A + +SL +NKL I L FS N L
Sbjct: 201 NKLAFMGPE-FQSAAGVTWISLRNNKLVLIEKA---------LRFSQNLEHFDLRGNGFH 250
Query: 301 IGNLKVLIGIDFSMNNFSGVIPREIGEKLSYLEDLNLSFNKLKGEIPRGGSFGNFSAESF 360
G L+ FS N + ++ +KL+ N+ + +P G +G + E
Sbjct: 251 CGTLRDF----FSKNQRVQTVAKQTVKKLT-------GQNEEECTVPTLGHYGAYCCEDL 299
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 57/133 (42%), Gaps = 19/133 (14%)
Query: 480 HRNLIKVISSCSNEEFKALVL-EYMPHGSLEKYLYSSN-----------CILDIFQRLNI 527
H N++ ++ +C+ +V+ E+ G+L YL S + F L
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 528 MI----DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMT 583
+I VA +E+L S IH DL N+LL + V + DF +A+ + + +
Sbjct: 150 LICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 206
Query: 584 QTQTLGTIGYMAP 596
+ + +MAP
Sbjct: 207 KGDARLPLKWMAP 219
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 60/132 (45%), Gaps = 7/132 (5%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+ F E M+ H +++K+I + E +++E G L +L LD+ +
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKFSLDLASLI 114
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ- 584
+++AL YL S +H D+ NVL+ L DF +++ + ED + +
Sbjct: 115 LYAYQLSTALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYM--EDSTYYKA 169
Query: 585 TQTLGTIGYMAP 596
++ I +MAP
Sbjct: 170 SKGKLPIKWMAP 181
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 70/159 (44%), Gaps = 30/159 (18%)
Query: 436 SYLELCRATDEFSENNLIGRGGFALFIRA-FKSFDVEC---------EMMKSIRHRNLIK 485
+Y +C A D GR G + I+ ++ F E ++K +RH N+I
Sbjct: 37 AYGAVCSAVD--------GRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIG 88
Query: 486 VISSCSNEE----FKA--LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 539
++ + +E F LV+ +M L K + D Q L V L+ L
Sbjct: 89 LLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHEKLGEDRIQFL-----VYQMLKGLR 142
Query: 540 FGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE 578
+ ++A +IH DLKP N+ ++++ + DF +A+ E
Sbjct: 143 YIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE 181
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 49/104 (47%), Gaps = 10/104 (9%)
Query: 498 LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVL 557
+ +E + GSL + + C+ + + L + LEYLH S ++H D+K NVL
Sbjct: 143 IFMELLEGGSLGQLVKEQGCLPED-RALYYLGQALEGLEYLH---SRRILHGDVKADNVL 198
Query: 558 L-DDNMVAHLSDFSIAKLLT----GEDQSMTQTQTLGTIGYMAP 596
L D A L DF A L G+D +T GT +MAP
Sbjct: 199 LSSDGSHAALCDFGHAVCLQPDGLGKDL-LTGDYIPGTETHMAP 241
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Query: 527 IMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNM----VAHLSDFSIAKLLTGED 579
++ + +EYLH S V+H DLKPSN+L D + DF AK L E+
Sbjct: 126 VLHTIGKTVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAEN 179
>pdb|3PMH|G Chain G, Mechanism Of Sulfotyrosine-Mediated Glycoprotein Ib
Interaction With Two Distinct Alpha-Thrombin Sites
Length = 290
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 28/59 (47%)
Query: 61 LEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYL 119
L++LYL GN P + KL KLSL N+ + L NL+ L L EN L
Sbjct: 126 LQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSL 184
Score = 32.7 bits (73), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 75/175 (42%), Gaps = 25/175 (14%)
Query: 111 QLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNN-----PLDGILPKTSISNLSRSLE 165
++ D+ LT+ P+L K T++ LS N L ++P T ++ L+ L+
Sbjct: 14 EVNCDKRNLTALPPDLP--------KDTTILHLSENLLYTFSLATLMPYTRLTQLN--LD 63
Query: 166 EFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGS 225
+ + G +P L +DL N+L S+P+ L L L++ N L S
Sbjct: 64 RAELTKLQVDGTLPV-------LGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLT-S 114
Query: 226 IPDDICR-LAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSIPLTFWN 279
+P R L EL L L N+L P L LSL +N LT +P N
Sbjct: 115 LPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLN 169
>pdb|3P72|A Chain A, Structure Of Platelet Glycoprotein 1b Alpha With A Bound
Peptide Inhibitor
Length = 269
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 27/59 (45%)
Query: 61 LEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYL 119
L++LYL GN P + KL KLSL N + L NL+ L L EN L
Sbjct: 126 LQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLNGLENLDTLLLQENSL 184
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 76/175 (43%), Gaps = 25/175 (14%)
Query: 111 QLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNN-----PLDGILPKTSISNLSRSLE 165
++ D+ LT+ P+L K T++ LS N L ++P T ++ L+ L+
Sbjct: 14 EVNCDKRQLTALPPDLP--------KDTTILHLSENLLYTFSLATLMPYTRLTQLN--LD 63
Query: 166 EFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGS 225
+ + G +P L +DL N+L S+P+ L L L++ N L S
Sbjct: 64 RCELTKLQVDGTLPV-------LGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLT-S 114
Query: 226 IPDDICR-LAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSIPLTFWN 279
+P R L EL L L N+L P L LSL +N+LT +P N
Sbjct: 115 LPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLN 169
>pdb|1GWB|B Chain B, Structure Of Glycoprotein 1b
pdb|1GWB|A Chain A, Structure Of Glycoprotein 1b
Length = 281
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 28/59 (47%)
Query: 61 LEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYL 119
L++LYL GN P + KL KLSL N+ + L NL+ L L EN L
Sbjct: 127 LQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSL 185
Score = 32.7 bits (73), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 75/175 (42%), Gaps = 25/175 (14%)
Query: 111 QLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNN-----PLDGILPKTSISNLSRSLE 165
++ D+ LT+ P+L K T++ LS N L ++P T ++ L+ L+
Sbjct: 15 EVNCDKRNLTALPPDLP--------KDTTILHLSENLLYTFSLATLMPYTRLTQLN--LD 64
Query: 166 EFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGS 225
+ + G +P L +DL N+L S+P+ L L L++ N L S
Sbjct: 65 RCELTKLQVDGTLPV-------LGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLT-S 115
Query: 226 IPDDICR-LAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSIPLTFWN 279
+P R L EL L L N+L P L LSL +N LT +P N
Sbjct: 116 LPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLN 170
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 9/74 (12%)
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDD---NMVAHLSDFSIAKLLTGEDQSM 582
IM + A++YLH S + H D+KP N+L N + L+DF AK T +
Sbjct: 135 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN--- 188
Query: 583 TQTQTLGTIGYMAP 596
+ T T Y+AP
Sbjct: 189 SLTTPCYTPYYVAP 202
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 9/74 (12%)
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDD---NMVAHLSDFSIAKLLTGEDQSM 582
IM + A++YLH S + H D+KP N+L N + L+DF AK T +
Sbjct: 125 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN--- 178
Query: 583 TQTQTLGTIGYMAP 596
+ T T Y+AP
Sbjct: 179 SLTTPCYTPYYVAP 192
>pdb|1U0N|D Chain D, The Ternary Von Willebrand Factor A1-Glycoprotein Ibalpha-
Botrocetin Complex
Length = 265
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 76/175 (43%), Gaps = 25/175 (14%)
Query: 111 QLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNN-----PLDGILPKTSISNLSRSLE 165
++ D+ LT+ P+L K T++ LS N L ++P T ++ L+ L+
Sbjct: 14 EVNCDKRQLTALPPDLP--------KDTTILHLSENLLYTFSLATLMPYTRLTQLN--LD 63
Query: 166 EFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGS 225
+ + G +P L +DL N+L S+P+ L L L++ N L S
Sbjct: 64 RCELTKLQVDGTLPV-------LGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLT-S 114
Query: 226 IPDDICR-LAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSIPLTFWN 279
+P R L EL L L N+L P L LSL +N+LT +P N
Sbjct: 115 LPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLN 169
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 27/59 (45%)
Query: 61 LEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYL 119
L++LYL GN P + KL KLSL N + L NL+ L L EN L
Sbjct: 126 LQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLNGLENLDTLLLQENSL 184
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 9/74 (12%)
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDD---NMVAHLSDFSIAKLLTGEDQSM 582
IM + A++YLH S + H D+KP N+L N + L+DF AK T +
Sbjct: 127 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN--- 180
Query: 583 TQTQTLGTIGYMAP 596
+ T T Y+AP
Sbjct: 181 SLTTPCYTPYYVAP 194
>pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor
Length = 285
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 59/140 (42%), Gaps = 10/140 (7%)
Query: 58 LPNLEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDEN 117
L NL L+L GN S R L +L L N + P F +L L L L N
Sbjct: 151 LGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFAN 210
Query: 118 YLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCNISGG 177
L++ E +L+ ++L + L++NP + L L++F + +
Sbjct: 211 NLSALPTE-----ALAPLRALQYLRLNDNPW---VCDCRARPLWAWLQKFRGSSSEVPCS 262
Query: 178 IPEEIS--NLTNLVEIDLGG 195
+P+ ++ +L L DL G
Sbjct: 263 LPQRLAGRDLKRLAANDLQG 282
>pdb|1OOK|G Chain G, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Human Alpha-thrombin
Length = 290
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 28/59 (47%)
Query: 61 LEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYL 119
L++LYL GN P + KL KLSL N+ + L NL+ L L EN L
Sbjct: 126 LQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSL 184
Score = 32.7 bits (73), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 75/175 (42%), Gaps = 25/175 (14%)
Query: 111 QLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNN-----PLDGILPKTSISNLSRSLE 165
++ D+ LT+ P+L K T++ LS N L ++P T ++ L+ L+
Sbjct: 14 EVNCDKRNLTALPPDLP--------KDTTILHLSENLLYTFSLATLMPYTRLTQLN--LD 63
Query: 166 EFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGS 225
+ + G +P L +DL N+L S+P+ L L L++ N L S
Sbjct: 64 RAELTKLQVDGTLPV-------LGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLT-S 114
Query: 226 IPDDICR-LAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSIPLTFWN 279
+P R L EL L L N+L P L LSL +N LT +P N
Sbjct: 115 LPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLN 169
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 9/74 (12%)
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDD---NMVAHLSDFSIAKLLTGEDQSM 582
IM + A++YLH S + H D+KP N+L N + L+DF AK T +
Sbjct: 120 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN--- 173
Query: 583 TQTQTLGTIGYMAP 596
+ T T Y+AP
Sbjct: 174 SLTTPCYTPYYVAP 187
>pdb|1P8V|A Chain A, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Alpha-thrombin At 2.6a
Length = 279
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 28/59 (47%)
Query: 61 LEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYL 119
L++LYL GN P + KL KLSL N+ + L NL+ L L EN L
Sbjct: 126 LQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSL 184
Score = 32.7 bits (73), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 75/175 (42%), Gaps = 25/175 (14%)
Query: 111 QLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNN-----PLDGILPKTSISNLSRSLE 165
++ D+ LT+ P+L K T++ LS N L ++P T ++ L+ L+
Sbjct: 14 EVNCDKRDLTALPPDLP--------KDTTILHLSENLLYTFSLATLMPYTRLTQLN--LD 63
Query: 166 EFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGS 225
+ + G +P L +DL N+L S+P+ L L L++ N L S
Sbjct: 64 RCELTKLQVDGTLPV-------LGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLT-S 114
Query: 226 IPDDICR-LAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSIPLTFWN 279
+P R L EL L L N+L P L LSL +N LT +P N
Sbjct: 115 LPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLN 169
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 9/74 (12%)
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDD---NMVAHLSDFSIAKLLTGEDQSM 582
IM + A++YLH S + H D+KP N+L N + L+DF AK T +
Sbjct: 165 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN--- 218
Query: 583 TQTQTLGTIGYMAP 596
+ T T Y+AP
Sbjct: 219 SLTTPCYTPYYVAP 232
>pdb|1M10|B Chain B, Crystal Structure Of The Complex Of Glycoprotein Ib Alpha
And The Von Willebrand Factor A1 Domain
Length = 290
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 27/59 (45%)
Query: 61 LEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYL 119
L++LYL GN P + KL KLSL N + L NL+ L L EN L
Sbjct: 126 LQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLNGLENLDTLLLQENSL 184
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 76/175 (43%), Gaps = 25/175 (14%)
Query: 111 QLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNN-----PLDGILPKTSISNLSRSLE 165
++ D+ LT+ P+L K T++ LS N L ++P T ++ L+ L+
Sbjct: 14 EVNCDKRQLTALPPDLP--------KDTTILHLSENLLYTFSLATLMPYTRLTQLN--LD 63
Query: 166 EFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGS 225
+ + G +P L +DL N+L S+P+ L L L++ N L S
Sbjct: 64 RCELTKLQVDGTLPV-------LGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLT-S 114
Query: 226 IPDDICR-LAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSIPLTFWN 279
+P R L EL L L N+L P L LSL +N+LT +P N
Sbjct: 115 LPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLN 169
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 9/74 (12%)
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDD---NMVAHLSDFSIAKLLTGEDQSM 582
IM + A++YLH S + H D+KP N+L N + L+DF AK T +
Sbjct: 126 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN--- 179
Query: 583 TQTQTLGTIGYMAP 596
+ T T Y+AP
Sbjct: 180 SLTTPCYTPYYVAP 193
>pdb|1M0Z|A Chain A, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
pdb|1M0Z|B Chain B, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
Length = 290
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 27/59 (45%)
Query: 61 LEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYL 119
L++LYL GN P + KL KLSL N + L NL+ L L EN L
Sbjct: 126 LQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLNGLENLDTLLLQENSL 184
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 76/175 (43%), Gaps = 25/175 (14%)
Query: 111 QLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNN-----PLDGILPKTSISNLSRSLE 165
++ D+ LT+ P+L K T++ LS N L ++P T ++ L+ L+
Sbjct: 14 EVNCDKRQLTALPPDLP--------KDTTILHLSENLLYTFSLATLMPYTRLTQLN--LD 63
Query: 166 EFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGS 225
+ + G +P L +DL N+L S+P+ L L L++ N L S
Sbjct: 64 RCELTKLQVDGTLPV-------LGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLT-S 114
Query: 226 IPDDICR-LAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSIPLTFWN 279
+P R L EL L L N+L P L LSL +N+LT +P N
Sbjct: 115 LPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLN 169
>pdb|1SQ0|B Chain B, Crystal Structure Of The Complex Of The Wild-Type Von
Willebrand Factor A1 Domain And Glycoprotein Ib Alpha At
2.6 Angstrom Resolution
Length = 288
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 27/59 (45%)
Query: 61 LEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYL 119
L++LYL GN P + KL KLSL N + L NL+ L L EN L
Sbjct: 126 LQELYLKGNELKTLPPGLLTPTPKLEKLSLANNDLTELPAGLLNGLENLDTLLLQENSL 184
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 75/175 (42%), Gaps = 25/175 (14%)
Query: 111 QLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNN-----PLDGILPKTSISNLSRSLE 165
++ D+ LT+ P+L K T++ LS N L ++P T ++ L+ L+
Sbjct: 14 EVNCDKRDLTALPPDLP--------KDTTILHLSENLLYTFSLATLMPYTRLTQLN--LD 63
Query: 166 EFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGS 225
+ + G +P L +DL N+L S+P+ L L L++ N L S
Sbjct: 64 RCELTKLQVDGTLPV-------LGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLT-S 114
Query: 226 IPDDICR-LAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSIPLTFWN 279
+P R L EL L L N+L P L LSL +N LT +P N
Sbjct: 115 LPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNDLTELPAGLLN 169
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 9/74 (12%)
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDD---NMVAHLSDFSIAKLLTGEDQSM 582
IM + A++YLH S + H D+KP N+L N + L+DF AK T +
Sbjct: 119 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN--- 172
Query: 583 TQTQTLGTIGYMAP 596
+ T T Y+AP
Sbjct: 173 SLTTPCYTPYYVAP 186
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 9/74 (12%)
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDD---NMVAHLSDFSIAKLLTGEDQSM 582
IM + A++YLH S + H D+KP N+L N + L+DF AK T +
Sbjct: 171 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN--- 224
Query: 583 TQTQTLGTIGYMAP 596
+ T T Y+AP
Sbjct: 225 SLTTPCYTPYYVAP 238
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 57/133 (42%), Gaps = 19/133 (14%)
Query: 480 HRNLIKVISSCSNEEFKALVL-EYMPHGSLEKYLYSSN-----------CILDIFQRLNI 527
H N++ ++ +C+ +V+ E+ G+L YL S + F L
Sbjct: 127 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 186
Query: 528 MI----DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMT 583
+I VA +E+L S IH DL N+LL + V + DF +A+ + + +
Sbjct: 187 LICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 243
Query: 584 QTQTLGTIGYMAP 596
+ + +MAP
Sbjct: 244 KGDARLPLKWMAP 256
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 9/74 (12%)
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDD---NMVAHLSDFSIAKLLTGEDQSM 582
IM + A++YLH S + H D+KP N+L N + L+DF AK T +
Sbjct: 121 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN--- 174
Query: 583 TQTQTLGTIGYMAP 596
+ T T Y+AP
Sbjct: 175 SLTTPCYTPYYVAP 188
>pdb|1P9A|G Chain G, Crystal Structure Of N-terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-alpha At 1.7 Angstrom
Resolution
pdb|1QYY|A Chain A, Crystal Structure Of N-Terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-Alpha At 2.8 Angstrom
Resolution
pdb|1QYY|G Chain G, Crystal Structure Of N-Terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-Alpha At 2.8 Angstrom
Resolution
Length = 290
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 28/59 (47%)
Query: 61 LEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYL 119
L++LYL GN P + KL KLSL N+ + L NL+ L L EN L
Sbjct: 126 LQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSL 184
Score = 32.7 bits (73), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 75/175 (42%), Gaps = 25/175 (14%)
Query: 111 QLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNN-----PLDGILPKTSISNLSRSLE 165
++ D+ LT+ P+L K T++ LS N L ++P T ++ L+ L+
Sbjct: 14 EVNCDKRNLTALPPDLP--------KDTTILHLSENLLYTFSLATLMPYTRLTQLN--LD 63
Query: 166 EFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGS 225
+ + G +P L +DL N+L S+P+ L L L++ N L S
Sbjct: 64 RAELTKLQVDGTLPV-------LGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLT-S 114
Query: 226 IPDDICR-LAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSIPLTFWN 279
+P R L EL L L N+L P L LSL +N LT +P N
Sbjct: 115 LPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLN 169
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 60/132 (45%), Gaps = 7/132 (5%)
Query: 466 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 525
+ F E M+ H +++K+I + E +++E G L +L LD+ +
Sbjct: 436 EKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKFSLDLASLI 494
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ- 584
+++AL YL S +H D+ NVL+ L DF +++ + ED + +
Sbjct: 495 LYAYQLSTALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYM--EDSTYYKA 549
Query: 585 TQTLGTIGYMAP 596
++ I +MAP
Sbjct: 550 SKGKLPIKWMAP 561
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 9/74 (12%)
Query: 526 NIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDD---NMVAHLSDFSIAKLLTGEDQSM 582
IM + A++YLH S + H D+KP N+L N + L+DF AK T +
Sbjct: 121 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN--- 174
Query: 583 TQTQTLGTIGYMAP 596
+ T T Y+AP
Sbjct: 175 SLTTPCYTPYYVAP 188
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 57/133 (42%), Gaps = 19/133 (14%)
Query: 480 HRNLIKVISSCSNEEFKALVL-EYMPHGSLEKYLYSSN-----------CILDIFQRLNI 527
H N++ ++ +C+ +V+ E+ G+L YL S + F L
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 528 MI----DVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMT 583
+I VA +E+L S IH DL N+LL + V + DF +A+ + + +
Sbjct: 150 LICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVR 206
Query: 584 QTQTLGTIGYMAP 596
+ + +MAP
Sbjct: 207 KGDARLPLKWMAP 219
>pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding
Domain Reveals A Convergent Recognition Scaffold
Mediating Inhibition Of Myelination
Length = 285
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 59/140 (42%), Gaps = 10/140 (7%)
Query: 58 LPNLEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDEN 117
L NL L+L GN S R L +L L N + P F +L L L L N
Sbjct: 152 LGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFAN 211
Query: 118 YLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCNISGG 177
L++ E +L+ ++L + L++NP + L L++F + +
Sbjct: 212 NLSALPTE-----ALAPLRALQYLRLNDNPW---VCDCRARPLWAWLQKFRGSSSEVPCS 263
Query: 178 IPEEIS--NLTNLVEIDLGG 195
+P+ ++ +L L DL G
Sbjct: 264 LPQRLAGRDLKRLAANDLQG 283
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Query: 527 IMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNM----VAHLSDFSIAKLLTGED 579
++ + +EYLH + V+H DLKPSN+L D + DF AK L E+
Sbjct: 121 VLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN 174
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.138 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,930,326
Number of Sequences: 62578
Number of extensions: 653216
Number of successful extensions: 3708
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 697
Number of HSP's successfully gapped in prelim test: 440
Number of HSP's that attempted gapping in prelim test: 1705
Number of HSP's gapped (non-prelim): 1432
length of query: 596
length of database: 14,973,337
effective HSP length: 104
effective length of query: 492
effective length of database: 8,465,225
effective search space: 4164890700
effective search space used: 4164890700
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)